Your job contains 1 sequence.
>psy13883
MLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTGERPAELID
NAFVCILKDKVFLFTPVLNMVFACLIRKVKNTIQRSKEPKVDYKAPMTNFHYYFKRCLLI
FCLYLCSGLKEVYTKSEYDVPKELNKEWQKNNPVIDNRTLAVKKFLVLLKEKLLKKEYAK
MKSWVFFKVFTTMTLRDTNHLQRCLAEPYGIGALNNIYKNEEKEVAQIFATYKDVDVEAV
QEKYPDVDVEEVRQRSLLFVPVPLVAIFHGRDFCTSTYNRDNPENEATFSHPNINFHFFP
FLLFRHIQMLRKHPIQKAIHTSSKLLDLNEFFDSPKNFGAEQVRVGRSWRKEELRVKSSS
DLHKLWYVLLKEQNMLKTMEHECKEKFIVFPNPERIDKNFFPNFIDPNLLNVPNFIKCSV
SSYRYVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLET
THTGERPAELIDNAFGLKEVYTKSEYDVPKELNKEWQKNNPVIDNRTLAVKKFLVLLKEK
LLKKEYAKMKNEEKEVAQIFATYKDVDVEAVQEKYPDVDVEEMCVKRVSSKVLLNESDLL
GHEIRKLRTTIGLPGRDLRETPNFYFLLLQYSGAILVMKVLQSVQIFKIGKSVFSKAKAA
KTTTTTTTTTTTTTTTTNYLLPITMSRYDSCPRYLNMAIICTYVLVEGRRLEWGMFKKVE
FFFRILVSNEQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGKYLSSFHVS
SSCLKEVYTKSEYDVPKELNKEWQKNNPVIDNRTLAVKKFLVLLKEKLLKKEYAKMKSWV
FFKVFTTMTLRDTNHLQRCLAEPYGIGVYYYDSEGYQPPTTLLSNHLQRCLAEPYGIGAL
NNIYEHLG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13883
(908 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
WARNING: hspmax=1000 was exceeded by 2 of the database sequences, causing
some HSPs that satisfied the cutoff score S2=34 to be discarded.
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0014023 - symbol:mRpL47 "mitochondrial ribosomal p... 309 1.6e-26 1
UNIPROTKB|F1P1G0 - symbol:MRPL47 "Uncharacterized protein... 229 1.3e-24 2
MGI|MGI:1921850 - symbol:Mrpl47 "mitochondrial ribosomal ... 245 8.0e-24 2
RGD|1307531 - symbol:Mrpl47 "mitochondrial ribosomal prot... 244 2.1e-23 2
UNIPROTKB|Q9HD33 - symbol:MRPL47 "39S ribosomal protein L... 244 5.5e-23 2
UNIPROTKB|E2QXX0 - symbol:MRPL47 "Uncharacterized protein... 242 5.6e-23 2
UNIPROTKB|F1SGC7 - symbol:MRPL47 "Uncharacterized protein... 240 7.2e-23 2
UNIPROTKB|F1MNT0 - symbol:MRPL47 "39S ribosomal protein L... 234 3.1e-22 2
UNIPROTKB|Q08DT6 - symbol:MRPL47 "39S ribosomal protein L... 234 3.1e-22 2
WB|WBGene00015092 - symbol:mrpl-47 species:6239 "Caenorha... 215 1.1e-21 2
TAIR|locus:2026550 - symbol:AT1G07830 species:3702 "Arabi... 173 6.1e-12 1
UNIPROTKB|H9KZJ9 - symbol:H9KZJ9 "Uncharacterized protein... 164 5.6e-11 1
POMBASE|SPCC4G3.06c - symbol:mrpl4 "mitochondrial ribosom... 126 6.4e-07 1
DICTYBASE|DDB_G0283823 - symbol:DDB_G0283823 species:4468... 129 7.4e-06 1
>FB|FBgn0014023 [details] [associations]
symbol:mRpL47 "mitochondrial ribosomal protein L47"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR010729 Pfam:PF06984 EMBL:AE014297
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 PANTHER:PTHR21183
GeneTree:ENSGT00390000002837 FlyBase:FBgn0014023 EMBL:AY089479
RefSeq:NP_788610.1 UniGene:Dm.20784 SMR:Q8T3V6 STRING:Q8T3V6
EnsemblMetazoa:FBtr0082121 GeneID:41141 KEGG:dme:Dmel_CG9378
UCSC:CG9378-RB CTD:41141 InParanoid:Q8T3V6 OMA:LLTMEHE
GenomeRNAi:41141 NextBio:822381 Uniprot:Q8T3V6
Length = 271
Score = 309 (113.8 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 72/183 (39%), Positives = 99/183 (54%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTG 484
+VLLKE+NML TMEHEC +K VFP+PERIDKV+ SMENLE V+RERN AY LET TG
Sbjct: 98 FVLLKERNMLLTMEHECNDKMEVFPSPERIDKVKISMENLETVVRERNKAYHLLETGETG 157
Query: 485 ERPAELIDNAFGLKEVYTKSEYDVPKELNKEWQKNNPVIDNRTXXXXXXXXXXXXXXXXX 544
ERP + + NAFGL+ Y E+ +P +N +W K+ I
Sbjct: 158 ERPQKAVKNAFGLQVSYKACEHALPPFMNLKWIKSRN-IGYGGRAVNRFLLKYREKLYNA 216
Query: 545 XXXXXXNEEKEVAQIFATYKDVDVEAVQEKYPDVDVEEMCVKRVSSKVLLNESDLLGHEI 604
EV I + D++ ++ ++PDV+V++ L NE + GH +
Sbjct: 217 KRKAKNRSRNEVMMILRRNPNFDLDVLRRQFPDVNVDK----------LRNEDKIRGHYV 266
Query: 605 RKL 607
K+
Sbjct: 267 PKV 269
Score = 293 (108.2 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 56/93 (60%), Positives = 72/93 (77%)
Query: 306 HIQMLRKHPIQKAIHTSSKLLDLNEFFDSPKNFGAEQVRVGRSWRKEELRVKSSSDLHKL 365
H+QM P+Q +HTS+ DL EFFD KN+ +V+VGR+WR EELR+KS+ +LH+L
Sbjct: 43 HVQM----PMQ--MHTSAVRRDLMEFFDDKKNWSENEVKVGRAWRTEELRIKSNKELHQL 96
Query: 366 WYVLLKEQNMLKTMEHECKEKFIVFPNPERIDK 398
W+VLLKE+NML TMEHEC +K VFP+PERIDK
Sbjct: 97 WFVLLKERNMLLTMEHECNDKMEVFPSPERIDK 129
Score = 219 (82.2 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 43/63 (68%), Positives = 49/63 (77%)
Query: 1 MLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTGERPAELID 60
ML TMEHEC +K VFP+PERIDKV+ SMENLE V+RERN AY LET TGERP + +
Sbjct: 106 MLLTMEHECNDKMEVFPSPERIDKVKISMENLETVVRERNKAYHLLETGETGERPQKAVK 165
Query: 61 NAF 63
NAF
Sbjct: 166 NAF 168
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/110 (34%), Positives = 57/110 (51%)
Query: 703 YVLVEGRRLEWGMFKKVEFFFRILVSNEQVQE---SMENLEDVIRERNVAYFQLETTHTG 759
+VL++ R + M + + S E++ + SMENLE V+RERN AY LET TG
Sbjct: 98 FVLLKERNMLLTMEHECNDKMEVFPSPERIDKVKISMENLETVVRERNKAYHLLETGETG 157
Query: 760 ERPAELIDNAFGKYLSSFHVSSSCLKEVYTKSEYDVPKELNKEWQKNNPV 809
ERP + + NAFG +S Y E+ +P +N +W K+ +
Sbjct: 158 ERPQKAVKNAFGLQVS------------YKACEHALPPFMNLKWIKSRNI 195
Score = 58 (25.5 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 219 KNEEK-EVAQIFATYKDVDVEAVQEKYPDVDVEEVRQRSLL---FVP 261
KN + EV I + D++ ++ ++PDV+V+++R + +VP
Sbjct: 221 KNRSRNEVMMILRRNPNFDLDVLRRQFPDVNVDKLRNEDKIRGHYVP 267
Score = 42 (19.8 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 128 GLKEVYTKSEYDVPKELNKEWQKNNPV 154
GL+ Y E+ +P +N +W K+ +
Sbjct: 169 GLQVSYKACEHALPPFMNLKWIKSRNI 195
>UNIPROTKB|F1P1G0 [details] [associations]
symbol:MRPL47 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005761 "mitochondrial ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR010729
Pfam:PF06984 GO:GO:0006412 GO:GO:0003735 GO:GO:0005761
PANTHER:PTHR21183 OMA:KSGAPWT GeneTree:ENSGT00390000002837
EMBL:AADN02020808 IPI:IPI00587208 Ensembl:ENSGALT00000022351
Uniprot:F1P1G0
Length = 215
Score = 229 (85.7 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 45/95 (47%), Positives = 62/95 (65%)
Query: 306 HIQMLRKHPIQKA--IHTSSKLLDLNEFFDSPKNFGAEQVRVGRSWRKEELRVKSSSDLH 363
H + + P+ A +H + L EFFD PKN+G + V+ G +W ++LR KSS DLH
Sbjct: 7 HRNLAQAEPLCHARFLHATLPRKGLEEFFDDPKNWGEKTVKSGDAWNIKQLRAKSSQDLH 66
Query: 364 KLWYVLLKEQNMLKTMEHECKEKFIVFPNPERIDK 398
KLWYVLLKE+NML T+E E K + P+PER++K
Sbjct: 67 KLWYVLLKEKNMLLTLEQESKRQQKPMPSPERLEK 101
Score = 200 (75.5 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 42/94 (44%), Positives = 62/94 (65%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTG 484
YVLLKE+NML T+E E K + P+PER++KVQ+SM+N++ V+RER +A L+T H
Sbjct: 70 YVLLKEKNMLLTLEQESKRQQKPMPSPERLEKVQKSMKNIDLVVREREIALRLLQTGHEK 129
Query: 485 ERPAELIDNAFGLKEVYTKSEYDVPKELNKEWQK 518
P E ++ G Y+ E+ +P LNK++QK
Sbjct: 130 PVPGEWRNDFLGRTYWYSYKEWPIPWYLNKKYQK 163
Score = 126 (49.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 1 MLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTGERPAE 57
ML T+E E K + P+PER++KVQ+SM+N++ V+RER +A L+T H P E
Sbjct: 78 MLLTLEQESKRQQKPMPSPERLEKVQKSMKNIDLVVREREIALRLLQTGHEKPVPGE 134
Score = 89 (36.4 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 730 EQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGKYLSSFHVSSSCLKEVYT 789
E+VQ+SM+N++ V+RER +A L+T H P E ++ G+ ++ Y+
Sbjct: 100 EKVQKSMKNIDLVVREREIALRLLQTGHEKPVPGEWRNDFLGR---TYW---------YS 147
Query: 790 KSEYDVPKELNKEWQK 805
E+ +P LNK++QK
Sbjct: 148 YKEWPIPWYLNKKYQK 163
Score = 45 (20.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 133 YTKSEYDVPKELNKEWQK 150
Y+ E+ +P LNK++QK
Sbjct: 146 YSYKEWPIPWYLNKKYQK 163
>MGI|MGI:1921850 [details] [associations]
symbol:Mrpl47 "mitochondrial ribosomal protein L47"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005761
"mitochondrial ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR010729 Pfam:PF06984
MGI:MGI:1921850 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 PANTHER:PTHR21183 eggNOG:NOG116806 CTD:57129
HOGENOM:HOG000019703 HOVERGEN:HBG050019 OrthoDB:EOG4ZKJNC
OMA:KSGAPWT EMBL:BC029173 EMBL:BC038065 EMBL:BC087953
IPI:IPI00322422 RefSeq:NP_083293.1 UniGene:Mm.288960
ProteinModelPortal:Q8K2Y7 SMR:Q8K2Y7 PhosphoSite:Q8K2Y7
PaxDb:Q8K2Y7 PRIDE:Q8K2Y7 Ensembl:ENSMUST00000043966 GeneID:74600
KEGG:mmu:74600 UCSC:uc008owp.2 GeneTree:ENSGT00390000002837
InParanoid:Q8K2Y7 ChiTaRS:MRPL47 NextBio:341189 Bgee:Q8K2Y7
CleanEx:MM_MRPL47 Genevestigator:Q8K2Y7
GermOnline:ENSMUSG00000037531 Uniprot:Q8K2Y7
Length = 252
Score = 245 (91.3 bits), Expect = 8.0e-24, Sum P(2) = 8.0e-24
Identities = 45/82 (54%), Positives = 60/82 (73%)
Query: 317 KAIHTSSKLLDLNEFFDSPKNFGAEQVRVGRSWRKEELRVKSSSDLHKLWYVLLKEQNML 376
K +HT+ L EFFD PKN+G E+V+ G SW ++LR KS+ DLHKLWYVLLKE+NML
Sbjct: 55 KLLHTTLSRKGLEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNML 114
Query: 377 KTMEHECKEKFIVFPNPERIDK 398
T+E E K + + P+PER++K
Sbjct: 115 LTLEQEAKRQRLPMPSPERLEK 136
Score = 171 (65.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 38/95 (40%), Positives = 60/95 (63%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTG 484
YVLLKE+NML T+E E K + + P+PER++KV +SM+N++ V++ER A L+T
Sbjct: 105 YVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDNVDKVVQEREDALRLLQTGQEK 164
Query: 485 ERPAELIDNAFGLKEVYTK-SEYDVPKELNKEWQK 518
RP + FG + V+ K ++ +P LNK + +
Sbjct: 165 PRPGAWRRDIFG-RIVWHKFKQWPIPWYLNKRYNR 198
Score = 65 (27.9 bits), Expect = 8.0e-24, Sum P(2) = 8.0e-24
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 730 EQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGK 772
E+V +SM+N++ V++ER A L+T RP + FG+
Sbjct: 135 EKVVDSMDNVDKVVQEREDALRLLQTGQEKPRPGAWRRDIFGR 177
>RGD|1307531 [details] [associations]
symbol:Mrpl47 "mitochondrial ribosomal protein L47"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005761 "mitochondrial ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR010729
Pfam:PF06984 RGD:1307531 GO:GO:0006412 GO:GO:0003735 EMBL:CH473961
GO:GO:0005761 PANTHER:PTHR21183 eggNOG:NOG116806 CTD:57129
HOGENOM:HOG000019703 HOVERGEN:HBG050019 OrthoDB:EOG4ZKJNC
OMA:KSGAPWT GeneTree:ENSGT00390000002837 EMBL:BC105820
IPI:IPI00372181 RefSeq:NP_001032260.1 UniGene:Rn.219103
Ensembl:ENSRNOT00000015864 GeneID:294963 KEGG:rno:294963
UCSC:RGD:1307531 InParanoid:Q3B8R7 NextBio:638787
Genevestigator:Q3B8R7 Uniprot:Q3B8R7
Length = 252
Score = 244 (91.0 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 45/82 (54%), Positives = 60/82 (73%)
Query: 317 KAIHTSSKLLDLNEFFDSPKNFGAEQVRVGRSWRKEELRVKSSSDLHKLWYVLLKEQNML 376
K +HT+ L EFFD PKN+G E+V+ G SW ++LR KS+ DLHKLWYVLLKE+NML
Sbjct: 55 KFLHTTLSRKGLEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNML 114
Query: 377 KTMEHECKEKFIVFPNPERIDK 398
T+E E K + + P+PER++K
Sbjct: 115 LTLEQEAKRQRLPMPSPERLEK 136
Score = 169 (64.5 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 40/106 (37%), Positives = 63/106 (59%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTG 484
YVLLKE+NML T+E E K + + P+PER++KV +SM+ L+ V++ER A L+T
Sbjct: 105 YVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDALDKVVQEREDALRLLQTGQEK 164
Query: 485 ERPAELIDNAFGLKEVYTK-SEYDVPKELNKEWQKNN----PVIDN 525
RP + FG + V+ K ++ +P LNK + + P +D+
Sbjct: 165 PRPGAWRQDIFG-RIVWHKFKQWPIPWYLNKRYNRRRFFAMPYVDS 209
Score = 62 (26.9 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 730 EQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGK 772
E+V +SM+ L+ V++ER A L+T RP + FG+
Sbjct: 135 EKVVDSMDALDKVVQEREDALRLLQTGQEKPRPGAWRQDIFGR 177
>UNIPROTKB|Q9HD33 [details] [associations]
symbol:MRPL47 "39S ribosomal protein L47, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005761 "mitochondrial ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0006412 EMBL:CH471052
GO:GO:0003735 GO:GO:0005761 EMBL:AC090425 PANTHER:PTHR21183
eggNOG:NOG116806 CTD:57129 HOGENOM:HOG000019703 HOVERGEN:HBG050019
OrthoDB:EOG4ZKJNC EMBL:BC021575 EMBL:BC032522 EMBL:AY212270
EMBL:AF285120 IPI:IPI00030820 IPI:IPI00375687 IPI:IPI00794978
RefSeq:NP_065142.2 RefSeq:NP_817125.1 UniGene:Hs.283734
ProteinModelPortal:Q9HD33 SMR:Q9HD33 IntAct:Q9HD33 STRING:Q9HD33
PhosphoSite:Q9HD33 DMDM:212276461 PaxDb:Q9HD33 PRIDE:Q9HD33
Ensembl:ENST00000259038 Ensembl:ENST00000392659
Ensembl:ENST00000476781 GeneID:57129 KEGG:hsa:57129 UCSC:uc003fjz.3
UCSC:uc003fkb.3 GeneCards:GC03M179306 HGNC:HGNC:16652 HPA:HPA037553
MIM:611852 neXtProt:NX_Q9HD33 PharmGKB:PA30979 InParanoid:Q9HD33
OMA:KSGAPWT PhylomeDB:Q9HD33 GenomeRNAi:57129 NextBio:63037
Bgee:Q9HD33 CleanEx:HS_MRPL47 Genevestigator:Q9HD33
GermOnline:ENSG00000136522 Uniprot:Q9HD33
Length = 250
Score = 244 (91.0 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 48/101 (47%), Positives = 66/101 (65%)
Query: 298 FFPFLLFRHIQMLRKHPIQKAIHTSSKLLDLNEFFDSPKNFGAEQVRVGRSWRKEELRVK 357
FF LL + + + +HT+ L EFFD PKN+G E+V+ G +W ++LR K
Sbjct: 34 FFLSLLPKSTPNVTSFHQYRLLHTTLSRKGLEEFFDDPKNWGQEKVKSGAAWTCQQLRNK 93
Query: 358 SSSDLHKLWYVLLKEQNMLKTMEHECKEKFIVFPNPERIDK 398
S+ DLHKLWYVLLKE+NML T+E E K + + P+PER+DK
Sbjct: 94 SNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLDK 134
Score = 170 (64.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 40/106 (37%), Positives = 63/106 (59%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTG 484
YVLLKE+NML T+E E K + + P+PER+DKV +SM+ L+ V++ER A L+T
Sbjct: 103 YVLLKERNMLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQER 162
Query: 485 ERPAELIDNAFGLKEVYTK-SEYDVPKELNKEWQKNN----PVIDN 525
RP + FG + ++ K ++ +P LNK + + P +D+
Sbjct: 163 ARPGAWRRDIFG-RIIWHKFKQWVIPWHLNKRYNRKRFFALPYVDH 207
Score = 58 (25.5 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 730 EQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGKYL 774
++V +SM+ L+ V++ER A L+T RP + FG+ +
Sbjct: 133 DKVVDSMDALDKVVQEREDALRLLQTGQERARPGAWRRDIFGRII 177
>UNIPROTKB|E2QXX0 [details] [associations]
symbol:MRPL47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005761 "mitochondrial ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 PANTHER:PTHR21183 OMA:KSGAPWT
GeneTree:ENSGT00390000002837 EMBL:AAEX03017257
Ensembl:ENSCAFT00000018082 Uniprot:E2QXX0
Length = 252
Score = 242 (90.2 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 44/82 (53%), Positives = 60/82 (73%)
Query: 317 KAIHTSSKLLDLNEFFDSPKNFGAEQVRVGRSWRKEELRVKSSSDLHKLWYVLLKEQNML 376
+ +HT+ L EFFD PKN+G E+V+ G SW ++LR KS+ DLHKLWYVLLKE+NML
Sbjct: 55 RLLHTTLSRKGLEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNML 114
Query: 377 KTMEHECKEKFIVFPNPERIDK 398
T+E E K + + P+PER++K
Sbjct: 115 LTLEQEAKRQRLPMPSPERLEK 136
Score = 164 (62.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 37/95 (38%), Positives = 59/95 (62%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTG 484
YVLLKE+NML T+E E K + + P+PER++KV +SM+ L+ V++ER A L+T
Sbjct: 105 YVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVIDSMDALDKVVQEREDALRLLQTGQEK 164
Query: 485 ERPAELIDNAFGLKEVYTK-SEYDVPKELNKEWQK 518
RP + FG + ++ K ++ +P LNK + +
Sbjct: 165 ARPGAWRRDIFG-RIIWHKFKQWPIPWYLNKRYNR 198
Score = 60 (26.2 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 730 EQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGKYL 774
E+V +SM+ L+ V++ER A L+T RP + FG+ +
Sbjct: 135 EKVIDSMDALDKVVQEREDALRLLQTGQEKARPGAWRRDIFGRII 179
Score = 37 (18.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 386 KFIVFPNPERIDKNFFPN--FIDPNLLNVPNFIKCSVSSYRYVLLKEQNMLKTMEHECKE 443
KF +P P ++K + F P V F++ + + + +++++ K E +E
Sbjct: 182 KFKQWPIPWYLNKRYNRKRFFAMPY---VERFVRLRLEKHARIEARKKSLEKKKEKFLQE 238
Query: 444 KF 445
KF
Sbjct: 239 KF 240
>UNIPROTKB|F1SGC7 [details] [associations]
symbol:MRPL47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005761
"mitochondrial ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR010729
Pfam:PF06984 GO:GO:0006412 GO:GO:0003735 GO:GO:0005761
PANTHER:PTHR21183 OMA:KSGAPWT GeneTree:ENSGT00390000002837
EMBL:CU695053 Ensembl:ENSSSCT00000012874 Uniprot:F1SGC7
Length = 253
Score = 240 (89.5 bits), Expect = 7.2e-23, Sum P(2) = 7.2e-23
Identities = 49/108 (45%), Positives = 69/108 (63%)
Query: 292 PNINFHFFPFLLFRHIQMLRKHPIQKAIHTSSKLLDLNEFFDSPKNFGAEQVRV-GRSWR 350
P+ + F P LL ++ + + HT+ L EFFD PKN+G E+V+ G SW
Sbjct: 30 PSTSCRFSPSLLPKNTPNVTSFHQFRIFHTTFSRRGLEEFFDDPKNWGEEKVKSEGASWT 89
Query: 351 KEELRVKSSSDLHKLWYVLLKEQNMLKTMEHECKEKFIVFPNPERIDK 398
++LR KS+ DLHKLWYVLLKE+NML T+E E K + + P+PER++K
Sbjct: 90 CQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLEK 137
Score = 166 (63.5 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 37/95 (38%), Positives = 60/95 (63%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTG 484
YVLLKE+NML T+E E K + + P+PER++KV +SM+ L+ V++ER A L+T
Sbjct: 106 YVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDALDKVVQEREDALRLLQTGQEK 165
Query: 485 ERPAELIDNAFGLKEVYTK-SEYDVPKELNKEWQK 518
RP + FG + ++ K ++ +P LNK++ +
Sbjct: 166 ARPGAWRRDIFG-RIIWHKFKQWPIPWYLNKKYNR 199
Score = 61 (26.5 bits), Expect = 7.2e-23, Sum P(2) = 7.2e-23
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 730 EQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGKYL 774
E+V +SM+ L+ V++ER A L+T RP + FG+ +
Sbjct: 136 EKVVDSMDALDKVVQEREDALRLLQTGQEKARPGAWRRDIFGRII 180
>UNIPROTKB|F1MNT0 [details] [associations]
symbol:MRPL47 "39S ribosomal protein L47, mitochondrial"
species:9913 "Bos taurus" [GO:0006412 "translation" evidence=IEA]
[GO:0005761 "mitochondrial ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 PANTHER:PTHR21183 IPI:IPI00686711 UniGene:Bt.24917
OMA:KSGAPWT GeneTree:ENSGT00390000002837 EMBL:DAAA02001958
Ensembl:ENSBTAT00000003195 Uniprot:F1MNT0
Length = 252
Score = 234 (87.4 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 43/82 (52%), Positives = 59/82 (71%)
Query: 317 KAIHTSSKLLDLNEFFDSPKNFGAEQVRVGRSWRKEELRVKSSSDLHKLWYVLLKEQNML 376
+ + T+ L EFFD PKN+G E+V+ G SW ++LR KS+ DLHKLWYVLLKE+NML
Sbjct: 55 RLLQTTLSRRGLEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNML 114
Query: 377 KTMEHECKEKFIVFPNPERIDK 398
T+E E K + + P+PER++K
Sbjct: 115 LTLEQEAKRQRLPMPSPERLEK 136
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/95 (38%), Positives = 59/95 (62%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTG 484
YVLLKE+NML T+E E K + + P+PER++KV +SM+ L+ V++ER A L+T
Sbjct: 105 YVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDALDKVVQEREDALRLLQTGQEK 164
Query: 485 ERPAELIDNAFGLKEVYTK-SEYDVPKELNKEWQK 518
RP + FG + ++ K ++ +P LNK + +
Sbjct: 165 PRPGAWRRDIFG-RIIWHKFKQWPIPWYLNKRYNR 198
Score = 61 (26.5 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 730 EQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGKYL 774
E+V +SM+ L+ V++ER A L+T RP + FG+ +
Sbjct: 135 EKVVDSMDALDKVVQEREDALRLLQTGQEKPRPGAWRRDIFGRII 179
>UNIPROTKB|Q08DT6 [details] [associations]
symbol:MRPL47 "39S ribosomal protein L47, mitochondrial"
species:9913 "Bos taurus" [GO:0006412 "translation" evidence=IEA]
[GO:0005761 "mitochondrial ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 PANTHER:PTHR21183 eggNOG:NOG116806 EMBL:BC123572
IPI:IPI00686711 RefSeq:NP_001070369.1 UniGene:Bt.24917 PRIDE:Q08DT6
GeneID:534317 KEGG:bta:534317 CTD:57129 HOGENOM:HOG000019703
HOVERGEN:HBG050019 InParanoid:Q08DT6 OrthoDB:EOG4ZKJNC
NextBio:20876352 Uniprot:Q08DT6
Length = 252
Score = 234 (87.4 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 43/82 (52%), Positives = 59/82 (71%)
Query: 317 KAIHTSSKLLDLNEFFDSPKNFGAEQVRVGRSWRKEELRVKSSSDLHKLWYVLLKEQNML 376
+ + T+ L EFFD PKN+G E+V+ G SW ++LR KS+ DLHKLWYVLLKE+NML
Sbjct: 55 RLLQTTLSRRGLEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNML 114
Query: 377 KTMEHECKEKFIVFPNPERIDK 398
T+E E K + + P+PER++K
Sbjct: 115 LTLEQEAKRQRLPMPSPERLEK 136
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/95 (38%), Positives = 59/95 (62%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTG 484
YVLLKE+NML T+E E K + + P+PER++KV +SM+ L+ V++ER A L+T
Sbjct: 105 YVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDALDKVVQEREDALRLLQTGQEK 164
Query: 485 ERPAELIDNAFGLKEVYTK-SEYDVPKELNKEWQK 518
RP + FG + ++ K ++ +P LNK + +
Sbjct: 165 PRPGAWRRDIFG-RIIWHKFKQWPIPWYLNKRYNR 198
Score = 61 (26.5 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 730 EQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGKYL 774
E+V +SM+ L+ V++ER A L+T RP + FG+ +
Sbjct: 135 EKVVDSMDALDKVVQEREDALRLLQTGQEKPRPGAWRRDIFGRII 179
>WB|WBGene00015092 [details] [associations]
symbol:mrpl-47 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005761 "mitochondrial ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
InterPro:IPR010729 Pfam:PF06984 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0006412
GO:GO:0010171 GO:GO:0048477 GO:GO:0003735 GO:GO:0005761
PANTHER:PTHR21183 HOGENOM:HOG000019703 GeneTree:ENSGT00390000002837
EMBL:FO080142 UniGene:Cel.19301 GeneID:172164 KEGG:cel:CELE_B0261.4
UCSC:B0261.4a CTD:172164 NextBio:874283 RefSeq:NP_001040632.1
ProteinModelPortal:Q2L6V2 SMR:Q2L6V2 EnsemblMetazoa:B0261.4a
WormBase:B0261.4a InParanoid:Q2L6V2 OMA:CLKERNM ArrayExpress:Q2L6V2
Uniprot:Q2L6V2
Length = 234
Score = 215 (80.7 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 50/113 (44%), Positives = 67/113 (59%)
Query: 295 NFH---FFPFLLFRHIQMLRKHPI--QKAIHTSSKLLDLNEFFDSPKNFGAEQVRV---- 345
NFH FF ++R + L + Q A++T + +FFD NFG ++R
Sbjct: 8 NFHSLRFFKSTMWRSLPSLVSSAVRSQNAVNTRFSST-MKQFFDDEANFGKAELRPKHRP 66
Query: 346 GRSWRKEELRVKSSSDLHKLWYVLLKEQNMLKTMEHECKEKFIVFPNPERIDK 398
GRSW EELR+KS+SDLHKLWYV LKE+NML TM+ + PNPER+D+
Sbjct: 67 GRSWTAEELRLKSNSDLHKLWYVCLKERNMLITMKKAHTSRARNMPNPERLDR 119
Score = 159 (61.0 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 38/102 (37%), Positives = 57/102 (55%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTG 484
YV LKE+NML TM+ + PNPER+D+V E+M+ +E V+ ERN A F+LET +
Sbjct: 88 YVCLKERNMLITMKKAHTSRARNMPNPERLDRVHETMDRIESVVHERNDAVFRLETGESA 147
Query: 485 ERPAELIDNAFGLKEVYTKSEYDVPKELN-KEWQKNNPVIDN 525
I + G +E+ P +L KE++ P +D+
Sbjct: 148 APRKRTITSFAGFTYQKQATEHFAPPQLGQKEYE--TPYLDD 187
Score = 75 (31.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 730 EQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGKYLSSFHVSSSCLKEVYT 789
++V E+M+ +E V+ ERN A F+LET + P + +F + +
Sbjct: 118 DRVHETMDRIESVVHERNDAVFRLETGESAA-PRKRTITSFAGFTYQKQATEHFAPPQLG 176
Query: 790 KSEYDVP 796
+ EY+ P
Sbjct: 177 QKEYETP 183
>TAIR|locus:2026550 [details] [associations]
symbol:AT1G07830 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005761 "mitochondrial ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR001854
InterPro:IPR010729 Pfam:PF06984 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0005761
Gene3D:1.10.287.310 SUPFAM:SSF46561 TIGRFAMs:TIGR00012
PANTHER:PTHR21183 eggNOG:NOG116806 EMBL:AF375438 EMBL:AY081746
IPI:IPI00522270 RefSeq:NP_172261.1 UniGene:At.22253
ProteinModelPortal:Q94JQ7 SMR:Q94JQ7 STRING:Q94JQ7 PaxDb:Q94JQ7
PRIDE:Q94JQ7 EnsemblPlants:AT1G07830.1 GeneID:837298
KEGG:ath:AT1G07830 TAIR:At1g07830 HOGENOM:HOG000005920
InParanoid:Q94JQ7 OMA:PERIPKV PhylomeDB:Q94JQ7
ProtClustDB:CLSN2682751 Genevestigator:Q94JQ7 Uniprot:Q94JQ7
Length = 144
Score = 173 (66.0 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 328 LNEFFDSPKNFGAEQ-VRVGRSWRKEELRVKSSSDLHKLWYVLLKEQNMLKTMEHECKEK 386
L EFF+ ++ ++ V GR W+ ELR+KS DL KLWYVLLKE+NML T + +
Sbjct: 38 LEEFFEFDRSQDEDKPVVYGRGWKASELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLQAQ 97
Query: 387 FIVFPNPERIDK 398
+ FPNPERI K
Sbjct: 98 NMQFPNPERIPK 109
Score = 115 (45.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 425 YVLLKEQNMLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNV 473
YVLLKE+NML T + + + FPNPERI KV+ SM ++ V+ ER +
Sbjct: 78 YVLLKEKNMLMTQRQMLQAQNMQFPNPERIPKVRRSMCRIKHVLTERAI 126
>UNIPROTKB|H9KZJ9 [details] [associations]
symbol:H9KZJ9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005761 "mitochondrial ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR010729
Pfam:PF06984 GO:GO:0006412 GO:GO:0003735 GO:GO:0005761
PANTHER:PTHR21183 GeneTree:ENSGT00390000002837 EMBL:AADN02039906
Ensembl:ENSGALT00000014766 Uniprot:H9KZJ9
Length = 138
Score = 164 (62.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 35/86 (40%), Positives = 54/86 (62%)
Query: 433 MLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTGERPAELID 492
ML T+E E K + P+PER++KVQ+SM+N++ V+RER +A L+T H P E +
Sbjct: 1 MLLTLEQESKRQQKPMPSPERLEKVQKSMKNIDLVVREREIALRLLQTGHEKPVPGEWRN 60
Query: 493 NAFGLKEVYTKSEYDVPKELNKEWQK 518
+ G Y+ E+ +P LNK++QK
Sbjct: 61 DFLGRTYWYSYKEWPIPWYLNKKYQK 86
Score = 126 (49.4 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 1 MLKTMEHECKEKFIVFPNPERIDKVQESMENLEDVIRERNVAYFQLETTHTGERPAE 57
ML T+E E K + P+PER++KVQ+SM+N++ V+RER +A L+T H P E
Sbjct: 1 MLLTLEQESKRQQKPMPSPERLEKVQKSMKNIDLVVREREIALRLLQTGHEKPVPGE 57
Score = 89 (36.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 730 EQVQESMENLEDVIRERNVAYFQLETTHTGERPAELIDNAFGKYLSSFHVSSSCLKEVYT 789
E+VQ+SM+N++ V+RER +A L+T H P E ++ G+ ++ Y+
Sbjct: 23 EKVQKSMKNIDLVVREREIALRLLQTGHEKPVPGEWRNDFLGR---TYW---------YS 70
Query: 790 KSEYDVPKELNKEWQK 805
E+ +P LNK++QK
Sbjct: 71 YKEWPIPWYLNKKYQK 86
Score = 55 (24.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 375 MLKTMEHECKEKFIVFPNPERIDK 398
ML T+E E K + P+PER++K
Sbjct: 1 MLLTLEQESKRQQKPMPSPERLEK 24
Score = 45 (20.9 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 133 YTKSEYDVPKELNKEWQK 150
Y+ E+ +P LNK++QK
Sbjct: 69 YSYKEWPIPWYLNKKYQK 86
>POMBASE|SPCC4G3.06c [details] [associations]
symbol:mrpl4 "mitochondrial ribosomal protein subunit L4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR010729 Pfam:PF06984 PomBase:SPCC4G3.06c EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0005762 GO:GO:0003735 GO:GO:0032543
PANTHER:PTHR21183 OrthoDB:EOG486CNK PIR:T41370 RefSeq:NP_587832.1
EnsemblFungi:SPCC4G3.06c.1 GeneID:2539502 KEGG:spo:SPCC4G3.06c
eggNOG:NOG116806 NextBio:20800664 Uniprot:P87232
Length = 144
Score = 126 (49.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 340 AEQVRVGRSWRKEELRVKSSSDLHKLWYVLLKEQNMLKTMEHECKEKFIVFPNP--ERI 396
+E+ + GR+W EELR KS +DLH LWY L+E+N+L T E K + P ER+
Sbjct: 52 SEEAKFGRAWAAEELRWKSFNDLHGLWYNCLREKNLLFTQRAEMKRLQLTIPKASNERV 110
>DICTYBASE|DDB_G0283823 [details] [associations]
symbol:DDB_G0283823 species:44689 "Dictyostelium
discoideum" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005761 "mitochondrial ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001854
InterPro:IPR010729 Pfam:PF06984 dictyBase:DDB_G0283823
GO:GO:0006412 GO:GO:0003735 EMBL:AAFI02000057 GO:GO:0005761
Gene3D:1.10.287.310 SUPFAM:SSF46561 PANTHER:PTHR21183
eggNOG:NOG116806 RefSeq:XP_638895.1 EnsemblProtists:DDB0185710
GeneID:8624292 KEGG:ddi:DDB_G0283823 InParanoid:Q54QH6 OMA:SFNDLHE
Uniprot:Q54QH6
Length = 199
Score = 129 (50.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 328 LNEFFDSPKNFGAEQVRVGRSWRKEELRVKSSSDLHKLWYVLLKEQNMLKTMEHECKEKF 387
L +FF+ G + GRSW +LR KS +DLH+LW+ LLKE+N L T + K
Sbjct: 45 LKDFFEHTYPIGTYPL-AGRSWAASDLRGKSFNDLHELWFELLKERNKLLTEKEITKNNQ 103
Query: 388 IVFPNPERIDK 398
+ NP+R+ K
Sbjct: 104 L--QNPQRVTK 112
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 908 823 0.00079 122 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 616 (65 KB)
Total size of DFA: 431 KB (2201 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 74.36u 0.11s 74.47t Elapsed: 00:00:04
Total cpu time: 74.36u 0.11s 74.47t Elapsed: 00:00:04
Start: Thu Aug 15 14:34:50 2013 End: Thu Aug 15 14:34:54 2013
WARNINGS ISSUED: 1