Query psy13887
Match_columns 107
No_of_seqs 116 out of 162
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 22:58:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13887.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13887hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dw8_B Serine/threonine-protei 99.8 4.1E-19 1.4E-23 133.4 7.6 105 2-106 320-424 (447)
2 4h5i_A Guanine nucleotide-exch 96.7 0.0011 3.8E-08 50.2 3.4 25 29-53 317-341 (365)
3 4aow_A Guanine nucleotide-bind 96.4 0.0021 7.1E-08 45.7 3.1 27 29-55 311-337 (340)
4 4ggc_A P55CDC, cell division c 96.2 0.0029 9.9E-08 44.5 3.0 26 29-54 289-314 (318)
5 2ymu_A WD-40 repeat protein; u 96.1 0.0052 1.8E-07 47.5 4.3 28 29-56 21-48 (577)
6 4h5i_A Guanine nucleotide-exch 96.0 0.005 1.7E-07 46.6 3.6 28 29-56 274-301 (365)
7 3iz6_a 40S ribosomal protein R 96.0 0.0059 2E-07 45.9 3.9 29 29-57 349-377 (380)
8 3frx_A Guanine nucleotide-bind 96.0 0.0039 1.3E-07 45.8 2.7 27 29-55 291-317 (319)
9 3f3f_A Nucleoporin SEH1; struc 95.9 0.0078 2.7E-07 41.9 3.9 29 29-57 311-339 (351)
10 4ggc_A P55CDC, cell division c 95.7 0.01 3.5E-07 41.7 4.0 28 29-56 72-99 (318)
11 2pm7_B Protein transport prote 95.7 0.01 3.5E-07 43.0 3.9 27 29-55 14-40 (297)
12 4gga_A P55CDC, cell division c 95.6 0.007 2.4E-07 45.9 3.0 26 29-54 369-394 (420)
13 4gga_A P55CDC, cell division c 95.5 0.011 3.8E-07 44.8 3.8 28 29-56 152-179 (420)
14 2ynn_A Coatomer subunit beta'; 95.5 0.015 5E-07 42.3 4.2 28 29-56 18-45 (304)
15 3mmy_A MRNA export factor; mRN 95.4 0.02 7E-07 40.6 4.7 29 29-57 91-119 (368)
16 3fm0_A Protein CIAO1; WDR39,SG 95.3 0.011 3.9E-07 43.8 3.3 29 28-56 20-48 (345)
17 3frx_A Guanine nucleotide-bind 95.3 0.016 5.6E-07 42.4 4.0 28 29-56 70-97 (319)
18 3lrv_A PRE-mRNA-splicing facto 95.2 0.018 6.3E-07 42.2 4.1 35 29-63 175-211 (343)
19 1nr0_A Actin interacting prote 95.1 0.021 7E-07 46.0 4.4 28 29-56 541-568 (611)
20 1nr0_A Actin interacting prote 95.1 0.021 7.3E-07 46.0 4.5 27 29-55 64-90 (611)
21 2pbi_B Guanine nucleotide-bind 95.1 0.013 4.6E-07 43.8 3.0 24 29-52 331-354 (354)
22 1erj_A Transcriptional repress 95.0 0.021 7.3E-07 43.0 4.1 28 29-56 128-155 (393)
23 3dw8_B Serine/threonine-protei 95.0 0.026 8.9E-07 41.8 4.3 35 20-57 27-61 (447)
24 3iz6_a 40S ribosomal protein R 95.0 0.025 8.5E-07 42.5 4.2 28 29-56 254-281 (380)
25 2w18_A PALB2, fancn, partner a 95.0 0.016 5.4E-07 47.0 3.3 24 30-53 332-355 (356)
26 4gqb_B Methylosome protein 50; 95.0 0.02 6.7E-07 43.4 3.7 28 29-56 132-159 (344)
27 4gqb_B Methylosome protein 50; 95.0 0.02 6.8E-07 43.3 3.7 32 29-60 262-294 (344)
28 3vu4_A KMHSV2; beta-propeller 94.9 0.024 8.1E-07 42.4 4.0 28 29-56 200-228 (355)
29 3f3f_A Nucleoporin SEH1; struc 94.9 0.022 7.5E-07 39.6 3.6 27 29-55 16-42 (351)
30 2oit_A Nucleoporin 214KDA; NH2 94.9 0.02 6.7E-07 45.0 3.7 27 29-55 197-223 (434)
31 2ymu_A WD-40 repeat protein; u 94.9 0.026 8.8E-07 43.6 4.2 28 29-56 62-89 (577)
32 3mmy_A MRNA export factor; mRN 94.9 0.024 8E-07 40.3 3.7 28 29-56 278-305 (368)
33 3bg1_A Protein SEC13 homolog; 94.9 0.017 5.8E-07 42.3 3.0 28 29-56 18-45 (316)
34 2pbi_B Guanine nucleotide-bind 94.9 0.028 9.5E-07 42.0 4.2 27 29-55 69-95 (354)
35 1got_B GT-beta; complex (GTP-b 94.8 0.016 5.6E-07 42.7 2.9 24 29-52 317-340 (340)
36 1got_B GT-beta; complex (GTP-b 94.8 0.033 1.1E-06 41.0 4.5 28 29-56 60-87 (340)
37 3zwl_B Eukaryotic translation 94.7 0.035 1.2E-06 39.4 4.2 28 29-56 37-64 (369)
38 2hes_X YDR267CP; beta-propelle 94.7 0.023 7.7E-07 41.9 3.3 26 29-54 112-137 (330)
39 3k26_A Polycomb protein EED; W 94.6 0.027 9.2E-07 40.1 3.5 26 29-54 340-365 (366)
40 4aow_A Guanine nucleotide-bind 94.6 0.034 1.2E-06 39.4 4.0 28 29-56 220-247 (340)
41 3bg1_A Protein SEC13 homolog; 94.6 0.051 1.7E-06 39.7 5.0 28 28-55 266-293 (316)
42 4e54_B DNA damage-binding prot 94.6 0.025 8.5E-07 43.1 3.4 28 29-56 301-328 (435)
43 3fm0_A Protein CIAO1; WDR39,SG 94.5 0.042 1.4E-06 40.7 4.4 28 29-56 110-137 (345)
44 4g56_B MGC81050 protein; prote 94.4 0.036 1.2E-06 41.6 3.8 28 29-56 144-171 (357)
45 2xzm_R RACK1; ribosome, transl 94.3 0.031 1.1E-06 41.1 3.4 26 29-54 218-243 (343)
46 4a11_B DNA excision repair pro 94.3 0.034 1.2E-06 40.2 3.4 29 29-57 339-367 (408)
47 3ow8_A WD repeat-containing pr 94.3 0.039 1.3E-06 40.8 3.8 28 29-56 169-196 (321)
48 3jrp_A Fusion protein of prote 94.3 0.039 1.3E-06 39.4 3.7 27 29-55 16-42 (379)
49 3ow8_A WD repeat-containing pr 94.3 0.043 1.5E-06 40.6 4.0 27 29-55 211-237 (321)
50 4g56_B MGC81050 protein; prote 94.3 0.033 1.1E-06 41.8 3.5 27 29-55 316-343 (357)
51 2xzm_R RACK1; ribosome, transl 94.2 0.031 1.1E-06 41.1 3.2 26 29-54 314-339 (343)
52 1yfq_A Cell cycle arrest prote 94.2 0.041 1.4E-06 39.1 3.7 28 29-56 256-283 (342)
53 4ery_A WD repeat-containing pr 94.2 0.043 1.5E-06 39.2 3.8 27 29-55 28-54 (312)
54 3vu4_A KMHSV2; beta-propeller 94.2 0.049 1.7E-06 40.7 4.2 27 29-55 245-271 (355)
55 2hes_X YDR267CP; beta-propelle 94.2 0.033 1.1E-06 41.0 3.2 26 29-54 158-183 (330)
56 3i2n_A WD repeat-containing pr 94.0 0.037 1.3E-06 39.3 3.2 27 29-55 326-353 (357)
57 3zwl_B Eukaryotic translation 94.0 0.066 2.3E-06 37.9 4.4 28 29-56 79-106 (369)
58 4ery_A WD repeat-containing pr 94.0 0.066 2.2E-06 38.2 4.4 28 29-56 70-97 (312)
59 2pm7_B Protein transport prote 93.9 0.044 1.5E-06 39.6 3.4 27 28-54 258-284 (297)
60 3dwl_C Actin-related protein 2 93.9 0.029 1E-06 40.8 2.4 28 29-56 210-237 (377)
61 1r5m_A SIR4-interacting protei 93.9 0.065 2.2E-06 38.7 4.2 27 29-55 113-139 (425)
62 2ynn_A Coatomer subunit beta'; 93.9 0.053 1.8E-06 39.3 3.8 28 29-56 233-260 (304)
63 4a11_B DNA excision repair pro 93.8 0.06 2E-06 38.8 4.0 28 29-56 48-76 (408)
64 1gxr_A ESG1, transducin-like e 93.8 0.098 3.4E-06 36.6 5.0 29 29-57 270-298 (337)
65 4e54_B DNA damage-binding prot 93.8 0.07 2.4E-06 40.6 4.5 27 29-55 169-196 (435)
66 3dwl_C Actin-related protein 2 93.8 0.029 9.9E-07 40.8 2.2 28 29-56 16-43 (377)
67 3vl1_A 26S proteasome regulato 93.7 0.071 2.4E-06 39.2 4.3 28 29-56 144-171 (420)
68 3dm0_A Maltose-binding peripla 93.7 0.045 1.5E-06 44.4 3.5 26 29-54 667-692 (694)
69 1sq9_A Antiviral protein SKI8; 93.7 0.064 2.2E-06 39.0 3.9 28 29-56 296-323 (397)
70 1k8k_C P40, ARP2/3 complex 41 93.6 0.081 2.8E-06 37.9 4.3 29 28-56 12-40 (372)
71 1r5m_A SIR4-interacting protei 93.4 0.058 2E-06 39.0 3.3 26 29-54 399-424 (425)
72 3ei3_B DNA damage-binding prot 93.4 0.11 3.6E-06 38.1 4.8 28 29-56 78-106 (383)
73 2j04_A TAU60, YPL007P, hypothe 93.3 0.043 1.5E-06 47.2 2.8 27 29-55 90-116 (588)
74 3jrp_A Fusion protein of prote 93.1 0.066 2.3E-06 38.2 3.2 28 28-55 260-287 (379)
75 4aez_A CDC20, WD repeat-contai 93.0 0.089 3.1E-06 39.4 3.9 28 29-56 354-381 (401)
76 3gre_A Serine/threonine-protei 92.9 0.075 2.6E-06 39.7 3.4 27 29-55 68-95 (437)
77 3vl1_A 26S proteasome regulato 92.9 0.094 3.2E-06 38.6 3.8 28 29-56 186-213 (420)
78 3k26_A Polycomb protein EED; W 92.9 0.12 3.9E-06 36.7 4.1 28 29-56 120-148 (366)
79 2aq5_A Coronin-1A; WD40 repeat 92.8 0.094 3.2E-06 39.0 3.8 28 29-56 181-208 (402)
80 3dm0_A Maltose-binding peripla 92.8 0.094 3.2E-06 42.5 4.0 28 29-56 435-462 (694)
81 4aez_A CDC20, WD repeat-contai 92.7 0.11 3.9E-06 38.8 4.1 28 29-56 139-166 (401)
82 1vyh_C Platelet-activating fac 92.6 0.1 3.5E-06 39.7 3.8 28 29-56 113-140 (410)
83 1erj_A Transcriptional repress 92.6 0.11 3.9E-06 39.0 4.0 29 28-56 169-197 (393)
84 1gxr_A ESG1, transducin-like e 92.6 0.15 5.2E-06 35.7 4.4 31 28-58 228-258 (337)
85 1vyh_C Platelet-activating fac 92.6 0.12 4.2E-06 39.3 4.2 28 29-56 197-224 (410)
86 1k8k_C P40, ARP2/3 complex 41 92.5 0.11 3.8E-06 37.2 3.6 28 29-56 207-234 (372)
87 3gre_A Serine/threonine-protei 92.5 0.12 4E-06 38.6 3.9 28 29-56 219-246 (437)
88 2j04_A TAU60, YPL007P, hypothe 92.5 0.09 3.1E-06 45.2 3.6 28 29-56 134-161 (588)
89 1yfq_A Cell cycle arrest prote 92.4 0.1 3.4E-06 37.1 3.3 30 29-58 61-92 (342)
90 2pm9_A Protein WEB1, protein t 92.3 0.16 5.4E-06 37.0 4.3 28 29-56 310-338 (416)
91 3i2n_A WD repeat-containing pr 92.1 0.16 5.6E-06 35.9 4.0 30 28-57 172-201 (357)
92 3mkq_A Coatomer beta'-subunit; 92.1 0.13 4.5E-06 41.4 3.9 28 29-56 18-45 (814)
93 2hqs_A Protein TOLB; TOLB, PAL 92.0 0.21 7.1E-06 38.4 4.9 30 29-58 183-215 (415)
94 2pm9_A Protein WEB1, protein t 92.0 0.15 5.3E-06 37.1 3.9 29 28-56 266-295 (416)
95 3ei3_B DNA damage-binding prot 91.9 0.21 7.2E-06 36.5 4.6 28 29-56 168-195 (383)
96 2vdu_B TRNA (guanine-N(7)-)-me 91.8 0.18 6.2E-06 38.4 4.3 26 29-54 107-133 (450)
97 1pgu_A Actin interacting prote 91.8 0.15 5.2E-06 39.1 3.8 28 29-56 493-520 (615)
98 1sq9_A Antiviral protein SKI8; 91.6 0.13 4.6E-06 37.3 3.2 27 29-55 359-395 (397)
99 2oaj_A Protein SNI1; WD40 repe 91.6 0.17 5.7E-06 43.7 4.3 30 28-57 215-244 (902)
100 3v7d_B Cell division control p 91.6 0.19 6.4E-06 37.8 4.1 28 29-56 315-342 (464)
101 3odt_A Protein DOA1; ubiquitin 91.1 0.19 6.5E-06 34.9 3.5 27 29-56 230-256 (313)
102 3odt_A Protein DOA1; ubiquitin 91.1 0.17 5.9E-06 35.1 3.2 27 29-55 64-90 (313)
103 2aq5_A Coronin-1A; WD40 repeat 91.0 0.22 7.5E-06 37.0 3.9 29 28-56 85-114 (402)
104 3lrv_A PRE-mRNA-splicing facto 90.8 0.23 8E-06 36.2 3.9 29 29-57 130-160 (343)
105 3sfz_A APAF-1, apoptotic pepti 90.3 0.27 9.2E-06 42.1 4.4 28 29-56 620-647 (1249)
106 2oaj_A Protein SNI1; WD40 repe 90.3 0.2 7E-06 43.2 3.7 27 29-55 22-48 (902)
107 4gq1_A NUP37; propeller, trans 90.2 0.11 3.8E-06 39.3 1.8 27 29-55 141-175 (393)
108 4gq1_A NUP37; propeller, trans 90.2 0.19 6.4E-06 38.0 3.0 29 28-56 190-219 (393)
109 1pby_B Quinohemoprotein amine 90.2 0.38 1.3E-05 33.7 4.4 29 28-56 283-311 (337)
110 2xyi_A Probable histone-bindin 90.1 0.24 8.4E-06 37.6 3.6 27 28-54 382-409 (430)
111 2oit_A Nucleoporin 214KDA; NH2 89.5 0.22 7.6E-06 39.0 3.0 26 29-54 97-126 (434)
112 2j04_B YDR362CP, TAU91; beta p 89.2 0.16 5.3E-06 41.5 2.0 27 28-54 401-427 (524)
113 2ojh_A Uncharacterized protein 89.2 0.47 1.6E-05 32.1 4.1 26 29-55 46-71 (297)
114 3jro_A Fusion protein of prote 89.1 0.23 7.9E-06 41.3 3.0 27 29-55 14-40 (753)
115 3mkq_A Coatomer beta'-subunit; 89.0 0.38 1.3E-05 38.7 4.1 27 29-55 233-259 (814)
116 3sfz_A APAF-1, apoptotic pepti 89.0 0.38 1.3E-05 41.2 4.2 28 29-56 662-689 (1249)
117 2vdu_B TRNA (guanine-N(7)-)-me 88.7 0.41 1.4E-05 36.4 3.9 28 29-57 246-273 (450)
118 2xyi_A Probable histone-bindin 88.4 0.41 1.4E-05 36.4 3.8 28 28-55 185-213 (430)
119 1l0q_A Surface layer protein; 88.4 0.45 1.5E-05 34.6 3.8 29 28-56 247-276 (391)
120 2ecf_A Dipeptidyl peptidase IV 88.0 0.6 2.1E-05 37.5 4.6 30 28-57 40-75 (741)
121 1l0q_A Surface layer protein; 87.6 0.61 2.1E-05 33.9 4.1 29 28-56 35-64 (391)
122 1p22_A F-BOX/WD-repeat protein 87.6 0.64 2.2E-05 35.1 4.3 25 31-55 138-162 (435)
123 1pgu_A Actin interacting prote 87.5 0.52 1.8E-05 36.1 3.9 28 29-56 536-573 (615)
124 3jro_A Fusion protein of prote 87.1 0.35 1.2E-05 40.3 2.8 27 29-55 259-285 (753)
125 2ovr_B FBW7, F-BOX/WD repeat p 87.0 0.39 1.3E-05 36.2 2.8 27 30-56 123-149 (445)
126 2j04_B YDR362CP, TAU91; beta p 85.7 0.75 2.6E-05 37.4 4.1 28 28-55 359-386 (524)
127 2ojh_A Uncharacterized protein 85.7 0.97 3.3E-05 30.5 4.0 30 28-57 220-260 (297)
128 3o4h_A Acylamino-acid-releasin 85.6 0.49 1.7E-05 37.2 2.8 30 27-56 24-54 (582)
129 2w18_A PALB2, fancn, partner a 85.5 0.61 2.1E-05 37.7 3.4 33 30-62 184-220 (356)
130 3v7d_B Cell division control p 85.3 0.65 2.2E-05 34.8 3.3 26 30-56 397-422 (464)
131 1jmx_B Amine dehydrogenase; ox 84.9 1 3.5E-05 31.7 4.0 27 29-55 299-325 (349)
132 3bws_A Protein LP49; two-domai 84.5 0.86 3E-05 33.6 3.6 27 28-54 404-431 (433)
133 3pe7_A Oligogalacturonate lyas 84.5 1.1 3.7E-05 32.5 4.1 29 29-57 85-113 (388)
134 1z68_A Fibroblast activation p 84.0 0.86 2.9E-05 36.7 3.6 29 28-57 113-141 (719)
135 4a5s_A Dipeptidyl peptidase 4 83.5 1.4 4.8E-05 36.3 4.8 40 16-57 8-47 (740)
136 3c5m_A Oligogalacturonate lyas 82.9 1.4 4.9E-05 31.7 4.1 29 29-57 85-113 (396)
137 1p22_A F-BOX/WD-repeat protein 82.7 0.91 3.1E-05 34.2 3.1 25 30-56 391-415 (435)
138 3hfq_A Uncharacterized protein 82.4 2.2 7.6E-05 30.6 5.0 27 29-55 290-317 (347)
139 3hfq_A Uncharacterized protein 80.8 2.1 7.3E-05 30.7 4.4 27 29-55 244-271 (347)
140 1ri6_A Putative isomerase YBHE 80.3 2.5 8.4E-05 29.5 4.5 26 29-54 42-68 (343)
141 2ecf_A Dipeptidyl peptidase IV 80.3 1.6 5.5E-05 35.0 3.9 28 28-56 155-182 (741)
142 1xfd_A DIP, dipeptidyl aminope 80.0 1.2 4.2E-05 35.5 3.2 29 29-58 118-146 (723)
143 1xfd_A DIP, dipeptidyl aminope 79.2 1.2 4.1E-05 35.6 2.8 29 27-56 19-47 (723)
144 1k32_A Tricorn protease; prote 79.2 2.3 7.8E-05 36.5 4.7 29 28-56 382-410 (1045)
145 3scy_A Hypothetical bacterial 78.7 3.2 0.00011 30.0 4.8 27 29-55 310-337 (361)
146 2ovr_B FBW7, F-BOX/WD repeat p 78.5 1.6 5.4E-05 32.8 3.2 27 29-55 412-442 (445)
147 2z3z_A Dipeptidyl aminopeptida 77.9 1.8 6.2E-05 34.6 3.6 26 29-55 125-150 (706)
148 2hqs_A Protein TOLB; TOLB, PAL 77.8 2 6.9E-05 32.9 3.7 29 27-55 356-387 (415)
149 1ri6_A Putative isomerase YBHE 77.1 2.3 7.8E-05 29.7 3.5 27 28-54 87-114 (343)
150 3pe7_A Oligogalacturonate lyas 77.0 1.6 5.4E-05 31.6 2.8 27 30-56 41-70 (388)
151 3o4h_A Acylamino-acid-releasin 76.7 1.7 5.6E-05 34.2 3.0 34 28-61 153-190 (582)
152 3u4y_A Uncharacterized protein 76.5 2.9 9.8E-05 29.5 3.9 27 29-55 277-304 (331)
153 3bws_A Protein LP49; two-domai 75.7 1.8 6.3E-05 31.8 2.8 26 30-55 175-200 (433)
154 2bkl_A Prolyl endopeptidase; m 75.6 2.8 9.4E-05 34.2 4.1 31 28-58 124-159 (695)
155 1z68_A Fibroblast activation p 75.2 3.5 0.00012 33.1 4.6 30 27-57 18-47 (719)
156 3c5m_A Oligogalacturonate lyas 75.0 2.6 8.8E-05 30.3 3.4 29 29-57 242-275 (396)
157 1pby_B Quinohemoprotein amine 74.6 3.8 0.00013 28.5 4.1 26 29-56 245-270 (337)
158 2gop_A Trilobed protease; beta 74.5 3.2 0.00011 29.5 3.8 30 28-57 62-96 (347)
159 2oiz_A Aromatic amine dehydrog 73.2 3.4 0.00012 31.1 3.8 28 28-56 308-335 (361)
160 2z3z_A Dipeptidyl aminopeptida 73.1 3.7 0.00013 32.8 4.2 28 29-56 262-294 (706)
161 3scy_A Hypothetical bacterial 72.8 6.4 0.00022 28.4 5.1 26 29-54 263-290 (361)
162 1jmx_B Amine dehydrogenase; ox 72.3 4.7 0.00016 28.3 4.1 27 28-56 258-285 (349)
163 3vgz_A Uncharacterized protein 71.7 3.9 0.00013 28.8 3.6 29 28-56 188-216 (353)
164 3azo_A Aminopeptidase; POP fam 70.9 2.7 9.3E-05 33.3 2.9 28 28-55 133-170 (662)
165 2gop_A Trilobed protease; beta 70.7 5.3 0.00018 28.4 4.2 18 28-45 107-124 (347)
166 3u4y_A Uncharacterized protein 70.4 5.8 0.0002 27.9 4.3 30 28-57 179-209 (331)
167 2xdw_A Prolyl endopeptidase; a 70.2 4.7 0.00016 32.9 4.2 30 29-58 129-163 (710)
168 4a5s_A Dipeptidyl peptidase 4 69.7 4.2 0.00014 33.4 3.9 29 28-57 115-143 (740)
169 1nir_A Nitrite reductase; hemo 69.4 4.1 0.00014 32.9 3.7 25 29-53 183-207 (543)
170 3iuj_A Prolyl endopeptidase; h 68.6 5.8 0.0002 32.6 4.5 29 30-58 134-167 (693)
171 1k32_A Tricorn protease; prote 67.2 3.9 0.00013 35.1 3.3 29 28-56 424-462 (1045)
172 1nir_A Nitrite reductase; hemo 66.8 5.9 0.0002 31.9 4.2 28 28-55 225-257 (543)
173 1yr2_A Prolyl oligopeptidase; 66.4 6.1 0.00021 32.5 4.2 32 29-60 167-203 (741)
174 1jof_A Carboxy-CIS,CIS-muconat 65.7 4.7 0.00016 29.7 3.1 28 29-56 311-342 (365)
175 3vgz_A Uncharacterized protein 65.4 9.7 0.00033 26.7 4.6 27 30-56 236-263 (353)
176 2oiz_A Aromatic amine dehydrog 64.9 5.6 0.00019 29.9 3.5 28 29-56 112-141 (361)
177 3e5z_A Putative gluconolactona 62.7 7.2 0.00025 27.4 3.5 26 29-54 176-201 (296)
178 2bkl_A Prolyl endopeptidase; m 62.7 7.7 0.00026 31.6 4.1 30 28-57 171-213 (695)
179 1jof_A Carboxy-CIS,CIS-muconat 62.4 6.3 0.00021 29.0 3.3 25 29-54 44-68 (365)
180 1q7f_A NHL, brain tumor CG1071 61.0 8.9 0.0003 26.6 3.7 25 29-54 255-279 (286)
181 1q7f_A NHL, brain tumor CG1071 60.5 14 0.00047 25.6 4.7 29 28-56 210-239 (286)
182 2dg1_A DRP35, lactonase; beta 58.5 14 0.00048 26.1 4.5 28 29-56 49-76 (333)
183 2mad_H Methylamine dehydrogena 56.2 14 0.00047 28.3 4.3 28 29-56 322-351 (373)
184 2xdw_A Prolyl endopeptidase; a 54.7 11 0.00037 30.7 3.7 28 29-56 175-218 (710)
185 1rwi_B Serine/threonine-protei 52.7 13 0.00046 25.2 3.4 28 28-55 237-264 (270)
186 1xip_A Nucleoporin NUP159; bet 52.3 7.6 0.00026 31.0 2.4 27 28-56 165-192 (388)
187 3fvz_A Peptidyl-glycine alpha- 51.4 11 0.00037 27.5 2.9 28 28-55 295-322 (329)
188 2yew_A Capsid protein, coat pr 50.1 1.9 6.6E-05 33.7 -1.4 15 12-26 94-108 (253)
189 3fvz_A Peptidyl-glycine alpha- 46.8 22 0.00074 25.8 4.0 28 29-56 95-122 (329)
190 2mad_H Methylamine dehydrogena 46.7 19 0.00066 27.5 3.8 27 29-56 129-157 (373)
191 3e5z_A Putative gluconolactona 45.7 14 0.00049 25.9 2.7 27 30-56 33-60 (296)
192 1kxf_A Sindbis virus capsid pr 44.7 3.8 0.00013 32.3 -0.5 17 12-28 103-119 (264)
193 3no2_A Uncharacterized protein 44.5 15 0.00053 26.6 2.9 23 33-55 2-24 (276)
194 3azo_A Aminopeptidase; POP fam 44.4 17 0.00057 28.7 3.2 27 28-54 245-271 (662)
195 1qks_A Cytochrome CD1 nitrite 39.2 39 0.0013 27.8 4.8 26 29-54 201-226 (567)
196 4gel_A Mitochondrial cardiolip 38.7 13 0.00045 26.1 1.6 12 34-45 162-173 (220)
197 4ggj_A Mitochondrial cardiolip 38.5 17 0.00057 25.9 2.2 19 24-45 123-141 (196)
198 3g4e_A Regucalcin; six bladed 35.6 32 0.0011 24.4 3.3 26 29-54 153-179 (297)
199 3no2_A Uncharacterized protein 35.4 35 0.0012 24.7 3.5 26 30-55 130-155 (276)
200 1yr2_A Prolyl oligopeptidase; 33.5 45 0.0015 27.3 4.2 29 28-56 271-304 (741)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 31.7 63 0.0022 22.2 4.3 27 29-55 22-55 (314)
202 3dsm_A Uncharacterized protein 29.9 63 0.0021 23.5 4.2 38 30-67 272-314 (328)
203 3sjl_D Methylamine dehydrogena 28.8 49 0.0017 26.3 3.6 29 28-56 140-170 (386)
204 1rwi_B Serine/threonine-protei 28.5 62 0.0021 21.8 3.7 29 28-56 153-181 (270)
205 2ghs_A AGR_C_1268P; regucalcin 26.7 60 0.0021 23.5 3.6 26 29-54 183-209 (326)
206 1byr_A Protein (endonuclease); 25.2 42 0.0015 21.8 2.3 20 23-45 92-111 (155)
207 3hrp_A Uncharacterized protein 25.0 71 0.0024 24.5 3.8 29 28-56 134-162 (409)
208 3dsm_A Uncharacterized protein 24.3 89 0.003 22.6 4.1 29 28-56 87-115 (328)
209 1qks_A Cytochrome CD1 nitrite 23.8 57 0.0019 26.8 3.2 28 28-55 243-275 (567)
210 3c75_H MADH, methylamine dehyd 23.7 79 0.0027 25.3 4.0 28 29-56 374-403 (426)
211 2qr7_A Ribosomal protein S6 ki 23.2 48 0.0016 24.7 2.5 53 2-63 1-54 (342)
212 3iuj_A Prolyl endopeptidase; h 22.9 1.4E+02 0.0048 24.3 5.4 28 28-55 237-268 (693)
213 2xe4_A Oligopeptidase B; hydro 21.9 82 0.0028 26.3 3.9 28 29-56 178-211 (751)
214 3c75_H MADH, methylamine dehyd 21.8 59 0.002 26.0 2.9 28 29-56 122-159 (426)
215 3fxz_A Serine/threonine-protei 20.8 1.1E+02 0.0038 21.8 4.0 49 9-62 3-51 (297)
216 2dg1_A DRP35, lactonase; beta 20.0 1.5E+02 0.005 20.7 4.4 26 30-55 238-263 (333)
No 1
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.77 E-value=4.1e-19 Score=133.37 Aligned_cols=105 Identities=80% Similarity=1.332 Sum_probs=99.6
Q ss_pred CCcccchHHHHHhhhhhhhccccccceeeEEcCCCCeEEecccCCeEEEeecCCCcceeEeeeccccCccccCCCcceee
Q psy13887 2 FPSPQVHEYLRSKLCSLYENDCIFDKFEVCWSGTDSAIMTGSYNNFFRMFDRINKRDATLEAAREIAKPKTLLRPRKVCT 81 (107)
Q Consensus 2 v~t~~vhe~Lr~kLcdLYEND~IFDKFec~~sgd~~~v~TGSYnn~F~ifd~~~~~~~~LeAsk~~~k~k~~~~~~~~~~ 81 (107)
+.++..|+.++.+||++|++||||+.|.++|||||++++|||.++.++||+..++..++||+.+++.+++....+++++.
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (447)
T 3dw8_B 320 VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCA 399 (447)
T ss_dssp SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEEC
T ss_pred cceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999998888988888
Q ss_pred CCCCCCCCCCCCCCcccccccccCC
Q psy13887 82 GGKRKKDEISVDCLDFNKKILHTAW 106 (107)
Q Consensus 82 ~~~~~~~~~~~d~~DF~kKILH~aW 106 (107)
++++.+.++..+.+||+++|++++|
T Consensus 400 ~~~~~~~~~~~~~~~~~~~i~~~~~ 424 (447)
T 3dw8_B 400 SGKRKKDEISVDSLDFNKKILHTAW 424 (447)
T ss_dssp SSCCCTTCEEGGGCCTTSCCCEEEE
T ss_pred cCCcccccccccccccCCceeEEEE
Confidence 8888888888899999999999998
No 2
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.69 E-value=0.0011 Score=50.23 Aligned_cols=25 Identities=20% Similarity=0.141 Sum_probs=23.7
Q ss_pred eeEEcCCCCeEEecccCCeEEEeec
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDR 53 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~ 53 (107)
.++|||||++++|||.++.+|||+.
T Consensus 317 ~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 317 EVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCeEEEEEc
Confidence 4799999999999999999999996
No 3
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.39 E-value=0.0021 Score=45.73 Aligned_cols=27 Identities=19% Similarity=0.514 Sum_probs=24.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|||||++++|||.++.++||+..+
T Consensus 311 ~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 311 SLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 369999999999999999999999754
No 4
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.21 E-value=0.0029 Score=44.55 Aligned_cols=26 Identities=8% Similarity=0.241 Sum_probs=23.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++|||||++++|||.++.++||+..
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEEcCCCCEEEEEecCCeEEEEECC
Confidence 36999999999999999999999863
No 5
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.12 E-value=0.0052 Score=47.49 Aligned_cols=28 Identities=18% Similarity=0.345 Sum_probs=25.1
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
-++|||||++++|||.++.++|||..++
T Consensus 21 ~~a~spdg~~las~~~d~~v~iWd~~~~ 48 (577)
T 2ymu_A 21 GVAFSPDGQTIASASDDKTVKLWNRNGQ 48 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECTTSC
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 3799999999999999999999997553
No 6
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.00 E-value=0.005 Score=46.57 Aligned_cols=28 Identities=7% Similarity=-0.047 Sum_probs=25.1
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
-++|||||++|+|||.++.++|||..+.
T Consensus 274 ~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 274 SMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred eEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 3689999999999999999999998653
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.97 E-value=0.0059 Score=45.92 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=25.4
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
.++|||||+.++|||+++.++||+..+.+
T Consensus 349 ~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 349 CLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 35899999999999999999999976543
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.95 E-value=0.0039 Score=45.82 Aligned_cols=27 Identities=19% Similarity=0.581 Sum_probs=24.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|||||++++|||.++.++||+..+
T Consensus 291 ~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 291 SLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EEEECCCCCEEEEeecCceEEEEEEee
Confidence 579999999999999999999999643
No 9
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.88 E-value=0.0078 Score=41.89 Aligned_cols=29 Identities=14% Similarity=0.318 Sum_probs=25.9
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
.++||+||+.++|||.++.++||+....+
T Consensus 311 ~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 311 SVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred EEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 46999999999999999999999987643
No 10
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.71 E-value=0.01 Score=41.71 Aligned_cols=28 Identities=14% Similarity=0.360 Sum_probs=25.4
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|+++|++++|||+++.++||+...+
T Consensus 72 ~v~~~~~~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 72 SVAWIKEGNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCCEEEEEECCCcEEEeecCCc
Confidence 4699999999999999999999998754
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.66 E-value=0.01 Score=42.98 Aligned_cols=27 Identities=11% Similarity=0.138 Sum_probs=24.7
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||+||++++|||+++.++||+..+
T Consensus 14 ~~~~s~~g~~las~s~D~~v~iw~~~~ 40 (297)
T 2pm7_B 14 DAVMDYYGKRMATCSSDKTIKIFEVEG 40 (297)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEBCS
T ss_pred EEEECCCCCEEEEEeCCCEEEEEecCC
Confidence 479999999999999999999999753
No 12
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.60 E-value=0.007 Score=45.89 Aligned_cols=26 Identities=8% Similarity=0.241 Sum_probs=24.0
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++|||||++|+|||.++.++||+..
T Consensus 369 ~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 369 SLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEEcCCCCEEEEEecCCeEEEEECC
Confidence 46999999999999999999999864
No 13
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.53 E-value=0.011 Score=44.78 Aligned_cols=28 Identities=14% Similarity=0.360 Sum_probs=25.3
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
-++||+||++++|||.++.++||+....
T Consensus 152 sv~fspdg~~lasgs~Dg~v~iWd~~~~ 179 (420)
T 4gga_A 152 SVAWIKEGNYLAVGTSSAEVQLWDVQQQ 179 (420)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEEECCCCCEEEEEECCCeEEEEEcCCC
Confidence 4699999999999999999999998653
No 14
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.46 E-value=0.015 Score=42.27 Aligned_cols=28 Identities=11% Similarity=0.247 Sum_probs=25.5
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||..++|||+++.++||+..+.
T Consensus 18 ~~~fsp~~~~l~s~~~dg~v~lWd~~~~ 45 (304)
T 2ynn_A 18 GIDFHPTEPWVLTTLYSGRVELWNYETQ 45 (304)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 5799999999999999999999998654
No 15
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.43 E-value=0.02 Score=40.58 Aligned_cols=29 Identities=31% Similarity=0.672 Sum_probs=26.1
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
.++|++|++.++|||+++.++||+..+..
T Consensus 91 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 119 (368)
T 3mmy_A 91 DVCWSDDGSKVFTASCDKTAKMWDLSSNQ 119 (368)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEECcCCCEEEEEcCCCcEEEEEcCCCC
Confidence 46999999999999999999999987654
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.33 E-value=0.011 Score=43.76 Aligned_cols=29 Identities=7% Similarity=0.274 Sum_probs=25.7
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
+-++|||||+.++|||.++.++||+..+.
T Consensus 20 ~~l~~sp~g~~las~~~D~~i~iw~~~~~ 48 (345)
T 3fm0_A 20 WFLAWNPAGTLLASCGGDRRIRIWGTEGD 48 (345)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEEEEETT
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEEcCCC
Confidence 35799999999999999999999987653
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.28 E-value=0.016 Score=42.43 Aligned_cols=28 Identities=11% Similarity=0.335 Sum_probs=25.3
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.|+|++||++++|||+++.++|||...+
T Consensus 70 ~~~~s~dg~~l~s~s~D~~v~~wd~~~~ 97 (319)
T 3frx_A 70 DCTLTADGAYALSASWDKTLRLWDVATG 97 (319)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 4799999999999999999999998654
No 18
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.22 E-value=0.018 Score=42.22 Aligned_cols=35 Identities=6% Similarity=0.030 Sum_probs=28.7
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCCcce--eEee
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINKRDA--TLEA 63 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~~~~--~LeA 63 (107)
.++|+|||..++|||.++.++|||......+ +++.
T Consensus 175 ~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~ 211 (343)
T 3lrv_A 175 SGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV 211 (343)
T ss_dssp EEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec
Confidence 4599999999999999999999998765443 4444
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.12 E-value=0.021 Score=46.03 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=25.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||++++|||.++.++||+....
T Consensus 541 ~v~fspdg~~lasgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 541 CVSWSPDNVRLATGSLDNSVIVWNMNKP 568 (611)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTCT
T ss_pred EEEECCCCCEEEEEECCCcEEEEECCCc
Confidence 4799999999999999999999998654
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.11 E-value=0.021 Score=45.96 Aligned_cols=27 Identities=15% Similarity=0.122 Sum_probs=24.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
-++|||||++++|||+++.++|||...
T Consensus 64 ~~~~spdg~~lasg~~d~~v~lWd~~~ 90 (611)
T 1nr0_A 64 VAKTSPSGYYCASGDVHGNVRIWDTTQ 90 (611)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEESSS
T ss_pred EEEECCCCcEEEEEeCCCCEEEeECCC
Confidence 469999999999999999999999754
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.08 E-value=0.013 Score=43.78 Aligned_cols=24 Identities=21% Similarity=0.401 Sum_probs=22.4
Q ss_pred eeEEcCCCCeEEecccCCeEEEee
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFD 52 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd 52 (107)
.++|||||++++|||+++.++||+
T Consensus 331 ~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 331 TLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCCCCEEEEEcCCCCEEecC
Confidence 469999999999999999999995
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.04 E-value=0.021 Score=43.04 Aligned_cols=28 Identities=29% Similarity=0.586 Sum_probs=25.5
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||+||++++|||.++.++|||..+.
T Consensus 128 ~v~~s~dg~~l~s~~~d~~i~iwd~~~~ 155 (393)
T 1erj_A 128 SVCFSPDGKFLATGAEDRLIRIWDIENR 155 (393)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 5799999999999999999999998653
No 23
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.97 E-value=0.026 Score=41.83 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=27.8
Q ss_pred hccccccceeeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 20 ENDCIFDKFEVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 20 END~IFDKFec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
+.|.|. -++||+||++++|||.++.++||+.....
T Consensus 27 ~~~~V~---~v~~s~~g~~la~g~~dg~v~iw~~~~~~ 61 (447)
T 3dw8_B 27 EADIIS---TVEFNHSGELLATGDKGGRVVIFQQEQEN 61 (447)
T ss_dssp GGGSEE---EEEECSSSSEEEEEETTSEEEEEEECC--
T ss_pred ccCcEE---EEEECCCCCEEEEEcCCCeEEEEEecCCC
Confidence 445553 46999999999999999999999987543
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.97 E-value=0.025 Score=42.48 Aligned_cols=28 Identities=25% Similarity=0.237 Sum_probs=25.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|+|||.+++|||.++.++|||...+
T Consensus 254 ~v~~~p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 254 SVKFFPDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp EEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred EEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence 4799999999999999999999998654
No 25
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=94.97 E-value=0.016 Score=47.03 Aligned_cols=24 Identities=33% Similarity=0.635 Sum_probs=22.6
Q ss_pred eEEcCCCCeEEecccCCeEEEeec
Q psy13887 30 VCWSGTDSAIMTGSYNNFFRMFDR 53 (107)
Q Consensus 30 c~~sgd~~~v~TGSYnn~F~ifd~ 53 (107)
++|||||++++|||.++.++||+.
T Consensus 332 vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 332 VKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEecC
Confidence 689999999999999999999984
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.97 E-value=0.02 Score=43.36 Aligned_cols=28 Identities=14% Similarity=0.268 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||+||++++|||.++.++|||...+
T Consensus 132 ~v~~spdg~~l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 132 TVSVLSSGTQAVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 4689999999999999999999997653
No 27
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.95 E-value=0.02 Score=43.32 Aligned_cols=32 Identities=9% Similarity=-0.013 Sum_probs=26.1
Q ss_pred eeEEcCCC-CeEEecccCCeEEEeecCCCccee
Q psy13887 29 EVCWSGTD-SAIMTGSYNNFFRMFDRINKRDAT 60 (107)
Q Consensus 29 ec~~sgd~-~~v~TGSYnn~F~ifd~~~~~~~~ 60 (107)
.++||||| ..|+|||.++.++|||...++-+.
T Consensus 262 ~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 262 GLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred EEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 46999998 578999999999999987654333
No 28
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.93 E-value=0.024 Score=42.42 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=25.1
Q ss_pred eeEEcCCCCeEEecccCCe-EEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNF-FRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~-F~ifd~~~~ 56 (107)
.++|||||++++|||.++. ++|||...+
T Consensus 200 ~~~~s~~g~~l~s~s~d~~~v~iwd~~~~ 228 (355)
T 3vu4_A 200 MVRLNRKSDMVATCSQDGTIIRVFKTEDG 228 (355)
T ss_dssp EEEECTTSSEEEEEETTCSEEEEEETTTC
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 4699999999999999998 999998753
No 29
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.93 E-value=0.022 Score=39.58 Aligned_cols=27 Identities=15% Similarity=0.203 Sum_probs=24.9
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||+||..++|||.++.++||+...
T Consensus 16 ~~~~~~~~~~l~~~~~dg~i~iw~~~~ 42 (351)
T 3f3f_A 16 DVVYDFYGRHVATCSSDQHIKVFKLDK 42 (351)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEECS
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCC
Confidence 479999999999999999999999864
No 30
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.92 E-value=0.02 Score=45.04 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=24.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||+||+++++||+++.++|||..+
T Consensus 197 ~v~wspdg~~lasgs~dg~v~iwd~~~ 223 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNGTVVQYLPTL 223 (434)
T ss_dssp EEEECTTSSCEEEEETTSCEEEECTTC
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEccCC
Confidence 459999999999999999999999763
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.89 E-value=0.026 Score=43.58 Aligned_cols=28 Identities=18% Similarity=0.345 Sum_probs=24.9
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||++++|||.++.++|||..+.
T Consensus 62 ~l~fspdg~~las~~~d~~i~vWd~~~~ 89 (577)
T 2ymu_A 62 GVAFSPDGQTIASASDDKTVKLWNRNGQ 89 (577)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSC
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 3689999999999999999999997653
No 32
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.89 E-value=0.024 Score=40.26 Aligned_cols=28 Identities=11% Similarity=0.278 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||++++|||.++.++||+....
T Consensus 278 ~~~~sp~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 278 GIAFHPVHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred EEEEecCCCEEEEEccCCeEEEEECCCC
Confidence 4699999999999999999999998653
No 33
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.88 E-value=0.017 Score=42.31 Aligned_cols=28 Identities=18% Similarity=0.156 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||+||++++|||.++.++||+...+
T Consensus 18 ~v~~s~~g~~lasgs~D~~v~lwd~~~~ 45 (316)
T 3bg1_A 18 DAQMDYYGTRLATCSSDRSVKIFDVRNG 45 (316)
T ss_dssp EEEECGGGCEEEEEETTTEEEEEEEETT
T ss_pred EeeEcCCCCEEEEEeCCCeEEEEEecCC
Confidence 4799999999999999999999997643
No 34
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.86 E-value=0.028 Score=42.01 Aligned_cols=27 Identities=15% Similarity=0.304 Sum_probs=24.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
-++||+|+++++|||.++.++|||..+
T Consensus 69 ~~~~s~d~~~l~s~s~Dg~v~vWd~~~ 95 (354)
T 2pbi_B 69 CMDWCKDKRRIVSSSQDGKVIVWDSFT 95 (354)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 469999999999999999999999654
No 35
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.83 E-value=0.016 Score=42.68 Aligned_cols=24 Identities=21% Similarity=0.526 Sum_probs=22.3
Q ss_pred eeEEcCCCCeEEecccCCeEEEee
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFD 52 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd 52 (107)
.++||+||..++|||+++.++||+
T Consensus 317 ~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 317 CLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEcCCCCEEEEEcCCccEEecC
Confidence 468999999999999999999996
No 36
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.79 E-value=0.033 Score=41.00 Aligned_cols=28 Identities=11% Similarity=0.363 Sum_probs=25.0
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||+||+.++|||.++.++||+....
T Consensus 60 ~~~~s~d~~~l~s~s~Dg~v~iWd~~~~ 87 (340)
T 1got_B 60 AMHWGTDSRLLLSASQDGKLIIWDSYTT 87 (340)
T ss_dssp EEEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 4699999999999999999999997543
No 37
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.69 E-value=0.035 Score=39.40 Aligned_cols=28 Identities=11% Similarity=0.181 Sum_probs=24.9
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||+||+.++||+.++.++||+....
T Consensus 37 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 64 (369)
T 3zwl_B 37 QVKYNKEGDLLFSCSKDSSASVWYSLNG 64 (369)
T ss_dssp EEEECTTSCEEEEEESSSCEEEEETTTC
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEeCCCc
Confidence 4699999999999999999999997643
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.68 E-value=0.023 Score=41.87 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=24.1
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++|||||++++|||.++.++||+..
T Consensus 112 ~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEECC
T ss_pred EEEECCCCCEEEEEeCCCEEEEEecc
Confidence 47999999999999999999999973
No 39
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.62 E-value=0.027 Score=40.05 Aligned_cols=26 Identities=15% Similarity=0.271 Sum_probs=23.5
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++||+||+.++|||.++.++||+..
T Consensus 340 ~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 340 QTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 47999999999999999999999863
No 40
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.60 E-value=0.034 Score=39.35 Aligned_cols=28 Identities=18% Similarity=0.102 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||+.++|||.++.++|||....
T Consensus 220 ~~~~s~~~~~l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 220 TVTVSPDGSLCASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp EEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred EEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence 3689999999999999999999998754
No 41
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.59 E-value=0.051 Score=39.71 Aligned_cols=28 Identities=18% Similarity=0.317 Sum_probs=25.1
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
+.++|||||..++|||.++.++||+...
T Consensus 266 ~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 266 WHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 3589999999999999999999999653
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.57 E-value=0.025 Score=43.13 Aligned_cols=28 Identities=14% Similarity=0.331 Sum_probs=25.1
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||.+++|||.++.++||+....
T Consensus 301 ~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 301 AACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp ECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred ceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 4689999999999999999999997653
No 43
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.48 E-value=0.042 Score=40.68 Aligned_cols=28 Identities=14% Similarity=0.299 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||+.++|||.++.++||+....
T Consensus 110 ~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 110 SVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 4699999999999999999999997643
No 44
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.36 E-value=0.036 Score=41.59 Aligned_cols=28 Identities=11% Similarity=0.172 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||++++|||.++.++|||....
T Consensus 144 ~v~~spdg~~l~sgs~dg~v~iwd~~~~ 171 (357)
T 4g56_B 144 TLSVFSDGTQAVSGGKDFSVKVWDLSQK 171 (357)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTT
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 4689999999999999999999998653
No 45
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.33 E-value=0.031 Score=41.09 Aligned_cols=26 Identities=19% Similarity=0.271 Sum_probs=24.0
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++|||||++++|||.++.++|||..
T Consensus 218 ~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 218 HLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EEEECTTSSEEEEEETTCEEEEEESS
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECC
Confidence 46899999999999999999999973
No 46
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.31 E-value=0.034 Score=40.16 Aligned_cols=29 Identities=7% Similarity=-0.030 Sum_probs=25.1
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
.++|++||.+++|||.++.++||+.....
T Consensus 339 ~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 339 CCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred EEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 36999999999999999999999987643
No 47
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.31 E-value=0.039 Score=40.78 Aligned_cols=28 Identities=14% Similarity=0.387 Sum_probs=25.4
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||++++|||.++.++|||...+
T Consensus 169 ~~~~spdg~~lasg~~dg~i~iwd~~~~ 196 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAIDGIINIFDIATG 196 (321)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 4699999999999999999999998654
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.30 E-value=0.039 Score=39.41 Aligned_cols=27 Identities=11% Similarity=0.145 Sum_probs=24.5
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||+||++++||+.++.++||+...
T Consensus 16 ~~~~s~~~~~l~~~~~dg~i~iw~~~~ 42 (379)
T 3jrp_A 16 DAVLDYYGKRLATCSSDKTIKIFEVEG 42 (379)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred EEEEcCCCCEEEEEECCCcEEEEecCC
Confidence 368999999999999999999999863
No 49
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.27 E-value=0.043 Score=40.56 Aligned_cols=27 Identities=15% Similarity=0.409 Sum_probs=24.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|||||..++|||.++.++|||...
T Consensus 211 ~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 211 SLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp EEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred EEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 479999999999999999999999764
No 50
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.27 E-value=0.033 Score=41.76 Aligned_cols=27 Identities=19% Similarity=0.215 Sum_probs=23.7
Q ss_pred eeEEcC-CCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSG-TDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sg-d~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||| |++.++|||+++.++||+...
T Consensus 316 ~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 316 GVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 479998 899999999999999999743
No 51
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.24 E-value=0.031 Score=41.12 Aligned_cols=26 Identities=15% Similarity=0.423 Sum_probs=24.1
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++|||||..++|||.++.++||+..
T Consensus 314 ~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 314 SLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp EEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred EEEECCCCCeEEEecCCceEEEEEEE
Confidence 57999999999999999999999864
No 52
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.23 E-value=0.041 Score=39.08 Aligned_cols=28 Identities=7% Similarity=0.180 Sum_probs=25.3
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|+|||+.++||+.++.++||+....
T Consensus 256 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 256 SIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred EEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 4699999999999999999999998654
No 53
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.22 E-value=0.043 Score=39.21 Aligned_cols=27 Identities=11% Similarity=0.273 Sum_probs=24.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|||||+.++|||.++.++||+...
T Consensus 28 ~~~~s~~~~~l~s~~~dg~i~iw~~~~ 54 (312)
T 4ery_A 28 SVKFSPNGEWLASSSADKLIKIWGAYD 54 (312)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEECCCCCEEEEeeCCCeEEEEeCCC
Confidence 469999999999999999999999754
No 54
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.17 E-value=0.049 Score=40.66 Aligned_cols=27 Identities=22% Similarity=0.350 Sum_probs=24.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|||||++++|||.++.++||+...
T Consensus 245 ~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 245 DMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp EEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred EEEECCCCCEEEEEECCCEEEEEEccC
Confidence 479999999999999999999999764
No 55
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.15 E-value=0.033 Score=40.95 Aligned_cols=26 Identities=19% Similarity=0.588 Sum_probs=23.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++|+||+..++|||+++.++||+..
T Consensus 158 ~v~~~p~~~~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDDTVRIWKDY 183 (330)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECC
Confidence 46899999999999999999999864
No 56
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.05 E-value=0.037 Score=39.31 Aligned_cols=27 Identities=15% Similarity=0.335 Sum_probs=24.3
Q ss_pred eeEEcCCCCeEE-ecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIM-TGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~-TGSYnn~F~ifd~~~ 55 (107)
.++||+||+.++ |||+++.++||+...
T Consensus 326 ~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 326 SLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred EEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 469999999999 899999999999754
No 57
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.03 E-value=0.066 Score=37.93 Aligned_cols=28 Identities=18% Similarity=0.157 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|++|+++++|||.++.++||+....
T Consensus 79 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 106 (369)
T 3zwl_B 79 SIDVDCFTKYCVTGSADYSIKLWDVSNG 106 (369)
T ss_dssp EEEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 4699999999999999999999997654
No 58
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.97 E-value=0.066 Score=38.23 Aligned_cols=28 Identities=18% Similarity=0.497 Sum_probs=25.3
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|++||+.++|||.++.++||+....
T Consensus 70 ~~~~~~~~~~l~s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 70 DVAWSSDSNLLVSASDDKTLKIWDVSSG 97 (312)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEcCCCCEEEEECCCCEEEEEECCCC
Confidence 4699999999999999999999997653
No 59
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=93.90 E-value=0.044 Score=39.57 Aligned_cols=27 Identities=11% Similarity=0.292 Sum_probs=24.6
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
..++|||||+.++|||.++.++||+..
T Consensus 258 ~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 258 WRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 357999999999999999999999865
No 60
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.88 E-value=0.029 Score=40.80 Aligned_cols=28 Identities=11% Similarity=0.043 Sum_probs=24.4
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||++++|||.++.++||+....
T Consensus 210 ~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 210 AVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 4699999999999999999999998754
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.87 E-value=0.065 Score=38.75 Aligned_cols=27 Identities=26% Similarity=0.562 Sum_probs=24.1
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||+||+.++||+.++.++||+..+
T Consensus 113 ~~~~s~~~~~l~~~~~dg~i~i~~~~~ 139 (425)
T 1r5m_A 113 CLAWSHDGNSIVTGVENGELRLWNKTG 139 (425)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 458999999999999999999999544
No 62
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.86 E-value=0.053 Score=39.26 Aligned_cols=28 Identities=14% Similarity=0.240 Sum_probs=25.0
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|+|++..++|||.++.++|||..+.
T Consensus 233 ~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 3689999999999999999999997653
No 63
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.84 E-value=0.06 Score=38.85 Aligned_cols=28 Identities=11% Similarity=0.217 Sum_probs=25.4
Q ss_pred eeEEcC-CCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSG-TDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sg-d~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||| ||+.++||+.++.++||+....
T Consensus 48 ~~~~s~~~~~~l~~~~~dg~i~iw~~~~~ 76 (408)
T 4a11_B 48 TLDIEPVEGRYMLSGGSDGVIVLYDLENS 76 (408)
T ss_dssp EEEECTTTCCEEEEEETTSCEEEEECCCC
T ss_pred EEEEecCCCCEEEEEcCCCeEEEEECCCC
Confidence 469999 9999999999999999998753
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.83 E-value=0.098 Score=36.64 Aligned_cols=29 Identities=3% Similarity=0.052 Sum_probs=25.9
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
.++|++||++++||+.++.++||+.....
T Consensus 270 ~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 46999999999999999999999987644
No 65
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.81 E-value=0.07 Score=40.64 Aligned_cols=27 Identities=11% Similarity=0.097 Sum_probs=23.9
Q ss_pred eeEEcC-CCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSG-TDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sg-d~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||| |+..++|||+++.++|||..+
T Consensus 169 ~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 169 GLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp EEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred EEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 468997 789999999999999999764
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.78 E-value=0.029 Score=40.85 Aligned_cols=28 Identities=11% Similarity=0.278 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||++++|||.++.++||+..+.
T Consensus 16 ~~~~s~~g~~l~~~~~d~~i~iw~~~~~ 43 (377)
T 3dwl_C 16 EHAFNSQRTEFVTTTATNQVELYEQDGN 43 (377)
T ss_dssp CCEECSSSSEEECCCSSSCBCEEEEETT
T ss_pred EEEECCCCCEEEEecCCCEEEEEEccCC
Confidence 4699999999999999999999998653
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=93.73 E-value=0.071 Score=39.23 Aligned_cols=28 Identities=7% Similarity=0.204 Sum_probs=25.3
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||..++|||.++.++||+....
T Consensus 144 ~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 171 (420)
T 3vl1_A 144 KLKFFPSGEALISSSQDMQLKIWSVKDG 171 (420)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 4699999999999999999999998643
No 68
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.72 E-value=0.045 Score=44.42 Aligned_cols=26 Identities=19% Similarity=0.456 Sum_probs=23.4
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++|||||++++|||.++.++||+..
T Consensus 667 ~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 667 SLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 46899999999999999999999863
No 69
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=93.68 E-value=0.064 Score=39.03 Aligned_cols=28 Identities=11% Similarity=0.394 Sum_probs=25.5
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|++||.+++|||.++.++||+....
T Consensus 296 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 296 SLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 5799999999999999999999998654
No 70
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.62 E-value=0.081 Score=37.88 Aligned_cols=29 Identities=10% Similarity=0.250 Sum_probs=25.8
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..++||+||+.+++|+.++.++||+..+.
T Consensus 12 ~~~~~s~~~~~l~~~~~d~~v~i~~~~~~ 40 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICPNNHEVHIYEKSGN 40 (372)
T ss_dssp CEEEECTTSSEEEEECSSSEEEEEEEETT
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCC
Confidence 35799999999999999999999997654
No 71
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.42 E-value=0.058 Score=39.01 Aligned_cols=26 Identities=8% Similarity=0.041 Sum_probs=24.0
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++||+||+++++|+.++.++||+..
T Consensus 399 ~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 399 DLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEECTTSSEEEEEESSSCCEEEECC
T ss_pred EEEccCCCceEEEEecCceEEEEeec
Confidence 57999999999999999999999864
No 72
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.41 E-value=0.11 Score=38.12 Aligned_cols=28 Identities=18% Similarity=0.302 Sum_probs=25.2
Q ss_pred eeEEcCCC-CeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTD-SAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~-~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|++|| +.++|||.++.++||+..+.
T Consensus 78 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 106 (383)
T 3ei3_B 78 SLEWHPTHPTTVAVGSKGGDIILWDYDVQ 106 (383)
T ss_dssp EEEECSSCTTEEEEEEBTSCEEEEETTST
T ss_pred EEEECCCCCCEEEEEcCCCeEEEEeCCCc
Confidence 46999999 99999999999999998753
No 73
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.29 E-value=0.043 Score=47.16 Aligned_cols=27 Identities=19% Similarity=-0.023 Sum_probs=24.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.|+|||||..+++||.++..+||++++
T Consensus 90 ~vawSPdG~~LAs~s~dg~V~iwd~~~ 116 (588)
T 2j04_A 90 VCKPSPIDDWMAVLSNNGNVSVFKDNK 116 (588)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEETTE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCc
Confidence 589999999999999999999999543
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.12 E-value=0.066 Score=38.19 Aligned_cols=28 Identities=11% Similarity=0.246 Sum_probs=25.1
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
..++|||||++++||+.++.++||+...
T Consensus 260 ~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 260 WRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 3569999999999999999999999763
No 75
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.00 E-value=0.089 Score=39.37 Aligned_cols=28 Identities=7% Similarity=0.090 Sum_probs=24.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||+||..++|||.++.++||+...+
T Consensus 354 ~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 354 YSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 4699999999999999999999998654
No 76
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=92.92 E-value=0.075 Score=39.67 Aligned_cols=27 Identities=15% Similarity=0.241 Sum_probs=24.4
Q ss_pred eeEEcC-CCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSG-TDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sg-d~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||+ ||..++|||.++.++||+...
T Consensus 68 ~~~~s~~~~~~l~s~s~dg~v~vwd~~~ 95 (437)
T 3gre_A 68 SSAVSPGETPYLITGSDQGVIKIWNLKE 95 (437)
T ss_dssp EEEEECSSSCEEEEEETTSEEEEEEHHH
T ss_pred EEEECCCCCCEEEEecCCceEEEeECcc
Confidence 468999 999999999999999999754
No 77
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.90 E-value=0.094 Score=38.56 Aligned_cols=28 Identities=7% Similarity=0.242 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|+|||+.++|||.++.++|||....
T Consensus 186 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 186 DIAIIDRGRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred EEEEcCCCCEEEEEcCCCcEEEeECCCC
Confidence 4699999999999999999999997654
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=92.87 E-value=0.12 Score=36.73 Aligned_cols=28 Identities=11% Similarity=0.245 Sum_probs=24.9
Q ss_pred eeEEcC-CCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSG-TDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sg-d~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|+| ++..++||++++.++||+....
T Consensus 120 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 120 ELKFHPRDPNLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTT
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEEeecC
Confidence 468999 9999999999999999998653
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.84 E-value=0.094 Score=39.04 Aligned_cols=28 Identities=21% Similarity=0.316 Sum_probs=25.3
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|++||+.++|||.++.++|||....
T Consensus 181 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 181 SVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp EEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 4699999999999999999999997653
No 80
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.79 E-value=0.094 Score=42.54 Aligned_cols=28 Identities=21% Similarity=0.412 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||+||+.++|||.++.++|||....
T Consensus 435 ~v~~s~~g~~l~sgs~Dg~v~vwd~~~~ 462 (694)
T 3dm0_A 435 DVVLSSDGQFALSGSWDGELRLWDLAAG 462 (694)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 4799999999999999999999997643
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.71 E-value=0.11 Score=38.79 Aligned_cols=28 Identities=25% Similarity=0.402 Sum_probs=25.3
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||+||.++++|+.++.++||+....
T Consensus 139 ~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 139 SVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 5699999999999999999999997653
No 82
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.63 E-value=0.1 Score=39.70 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=25.0
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
-++|+|++..++|||.++.++|||...+
T Consensus 113 ~~~~~p~~~~l~s~s~Dg~i~vwd~~~~ 140 (410)
T 1vyh_C 113 RVIFHPVFSVMVSASEDATIKVWDYETG 140 (410)
T ss_dssp EEEECSSSSEEEEEESSSCEEEEETTTC
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 3589999999999999999999997653
No 83
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.62 E-value=0.11 Score=39.03 Aligned_cols=29 Identities=14% Similarity=0.308 Sum_probs=25.7
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..++|+|||..++|||.++.++|||....
T Consensus 169 ~~~~~~p~~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 169 YSLDYFPSGDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred EEEEEcCCCCEEEEecCCCcEEEEECCCC
Confidence 35799999999999999999999997653
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.60 E-value=0.15 Score=35.66 Aligned_cols=31 Identities=10% Similarity=0.133 Sum_probs=26.8
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCCcc
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINKRD 58 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~~~ 58 (107)
..++||+||..+++|+.++.+++|+.....-
T Consensus 228 ~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCCe
Confidence 3579999999999999999999999876543
No 85
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.57 E-value=0.12 Score=39.26 Aligned_cols=28 Identities=14% Similarity=0.214 Sum_probs=25.1
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|+|+|.+++|||.++.+++||...+
T Consensus 197 ~v~~~p~~~~l~s~s~D~~i~~wd~~~~ 224 (410)
T 1vyh_C 197 SVSIMPNGDHIVSASRDKTIKMWEVQTG 224 (410)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 4689999999999999999999997653
No 86
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.48 E-value=0.11 Score=37.16 Aligned_cols=28 Identities=25% Similarity=0.261 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|++||..++|||.++.++||+....
T Consensus 207 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 207 GVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp EEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 4699999999999999999999998643
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=92.47 E-value=0.12 Score=38.59 Aligned_cols=28 Identities=11% Similarity=0.310 Sum_probs=25.0
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||++..++|||.++.++|||....
T Consensus 219 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 219 SICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 3589999999999999999999997653
No 88
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.45 E-value=0.09 Score=45.18 Aligned_cols=28 Identities=18% Similarity=0.376 Sum_probs=25.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||+.++|||-++.++||+..++
T Consensus 134 svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 134 CFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp EEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 5799999999999999999999998764
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=92.41 E-value=0.1 Score=37.06 Aligned_cols=30 Identities=10% Similarity=-0.031 Sum_probs=26.1
Q ss_pred eeEEcCCCC-eEEecccCCeEEEeec-CCCcc
Q psy13887 29 EVCWSGTDS-AIMTGSYNNFFRMFDR-INKRD 58 (107)
Q Consensus 29 ec~~sgd~~-~v~TGSYnn~F~ifd~-~~~~~ 58 (107)
.++|++|++ .+++|+.++.+++|+. .+...
T Consensus 61 ~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 92 (342)
T 1yfq_A 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF 92 (342)
T ss_dssp EEEEEESSSEEEEEEETTSCEEEECSSSSSSE
T ss_pred EEEECCCCCcEEEEEcCCCeEEEEEeccCCce
Confidence 469999999 9999999999999998 65443
No 90
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.31 E-value=0.16 Score=37.05 Aligned_cols=28 Identities=11% Similarity=0.106 Sum_probs=25.4
Q ss_pred eeEEcCCC-CeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTD-SAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~-~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||||+ ..++|||.++.++||+....
T Consensus 310 ~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 310 KTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp CEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred EEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 57999999 89999999999999998754
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=92.06 E-value=0.16 Score=35.92 Aligned_cols=30 Identities=20% Similarity=0.343 Sum_probs=24.5
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
|.++||+++..+++|+.++.+++||.....
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMA 201 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTE
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCc
Confidence 344589999999999999999999987643
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.05 E-value=0.13 Score=41.41 Aligned_cols=28 Identities=11% Similarity=0.243 Sum_probs=25.0
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
-++|||||..++||++++.++||+..++
T Consensus 18 ~i~~sp~~~~la~~~~~g~v~iwd~~~~ 45 (814)
T 3mkq_A 18 GIDFHPTEPWVLTTLYSGRVEIWNYETQ 45 (814)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 3699999999999999999999997543
No 93
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.03 E-value=0.21 Score=38.43 Aligned_cols=30 Identities=13% Similarity=0.165 Sum_probs=25.6
Q ss_pred eeEEcCCCCeEEecccCC---eEEEeecCCCcc
Q psy13887 29 EVCWSGTDSAIMTGSYNN---FFRMFDRINKRD 58 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn---~F~ifd~~~~~~ 58 (107)
.++|||||++|+++|+.+ .+.+||..+++.
T Consensus 183 ~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~ 215 (415)
T 2hqs_A 183 SPAWSPDGSKLAYVTFESGRSALVIQTLANGAV 215 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred eeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE
Confidence 479999999999999986 999999876543
No 94
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=91.95 E-value=0.15 Score=37.12 Aligned_cols=29 Identities=7% Similarity=0.327 Sum_probs=25.5
Q ss_pred eeeEEcC-CCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSG-TDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sg-d~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..++||| |+..++|||.++.++||+....
T Consensus 266 ~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 266 LSLDWCHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp EEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred eEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 3579999 9999999999999999997653
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.87 E-value=0.21 Score=36.53 Aligned_cols=28 Identities=14% Similarity=0.019 Sum_probs=24.9
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||+|+..++||+.++.+++||..+.
T Consensus 168 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 195 (383)
T 3ei3_B 168 CVDVSVSRQMLATGDSTGRLLLLGLDGH 195 (383)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTSC
T ss_pred EEEECCCCCEEEEECCCCCEEEEECCCC
Confidence 4689999999999999999999997543
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.81 E-value=0.18 Score=38.37 Aligned_cols=26 Identities=12% Similarity=0.184 Sum_probs=23.8
Q ss_pred eeEEcCCCCeE-EecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAI-MTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v-~TGSYnn~F~ifd~~ 54 (107)
.++|||||+.+ +|||.++.++||+..
T Consensus 107 ~~~~s~d~~~l~~~~~~dg~v~iwd~~ 133 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSDKSLLVFDVD 133 (450)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEECc
Confidence 46899999995 999999999999987
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=91.76 E-value=0.15 Score=39.10 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||++++||+.++.++||+....
T Consensus 493 ~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 520 (615)
T 1pgu_A 493 YISISPSETYIAAGDVMGKILLYDLQSR 520 (615)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEEECCCCCEEEEcCCCCeEEEeeCCCC
Confidence 4699999999999999999999998653
No 98
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.60 E-value=0.13 Score=37.33 Aligned_cols=27 Identities=11% Similarity=0.181 Sum_probs=24.4
Q ss_pred eeEEcCCC----------CeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTD----------SAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~----------~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|++|| ..++|||.++.++||+..+
T Consensus 359 ~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 359 DVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 57999999 7999999999999999754
No 99
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=91.58 E-value=0.17 Score=43.71 Aligned_cols=30 Identities=13% Similarity=0.139 Sum_probs=26.4
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
..++|||||.+++|||.++.++|||...++
T Consensus 215 ~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 215 IQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 357999999999999999999999986543
No 100
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=91.55 E-value=0.19 Score=37.82 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|++||..++|||.++.++|||...+
T Consensus 315 ~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 315 STIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 4799999999999999999999998653
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=91.12 E-value=0.19 Score=34.88 Aligned_cols=27 Identities=11% Similarity=0.131 Sum_probs=23.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|+||| .++|||.++.++||+....
T Consensus 230 ~~~~~~~~-~l~~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 230 CIKLLPNG-DIVSCGEDRTVRIWSKENG 256 (313)
T ss_dssp EEEECTTS-CEEEEETTSEEEEECTTTC
T ss_pred EEEEecCC-CEEEEecCCEEEEEECCCC
Confidence 46899999 7999999999999997654
No 102
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=91.06 E-value=0.17 Score=35.11 Aligned_cols=27 Identities=11% Similarity=0.345 Sum_probs=24.3
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|++|+..+++|+.++.+++|+...
T Consensus 64 ~~~~~~~~~~l~~~~~dg~i~~~~~~~ 90 (313)
T 3odt_A 64 SVCYDSEKELLLFGGKDTMINGVPLFA 90 (313)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEETTC
T ss_pred EEEECCCCCEEEEecCCCeEEEEEeee
Confidence 469999999999999999999998754
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=90.98 E-value=0.22 Score=37.02 Aligned_cols=29 Identities=17% Similarity=0.446 Sum_probs=25.6
Q ss_pred eeeEEcC-CCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSG-TDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sg-d~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..++|++ ++..++|||.++.++||+....
T Consensus 85 ~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 85 LDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 3479999 9999999999999999997653
No 104
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=90.83 E-value=0.23 Score=36.25 Aligned_cols=29 Identities=0% Similarity=-0.127 Sum_probs=24.6
Q ss_pred eeEEcC--CCCeEEecccCCeEEEeecCCCc
Q psy13887 29 EVCWSG--TDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 29 ec~~sg--d~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
.++|+| ++.+++|||.++.++|||.....
T Consensus 130 ~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~ 160 (343)
T 3lrv_A 130 YMYGHNEVNTEYFIWADNRGTIGFQSYEDDS 160 (343)
T ss_dssp EEECCC---CCEEEEEETTCCEEEEESSSSC
T ss_pred EEEcCCCCCCCEEEEEeCCCcEEEEECCCCc
Confidence 368999 99999999999999999987543
No 105
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.35 E-value=0.27 Score=42.06 Aligned_cols=28 Identities=14% Similarity=0.323 Sum_probs=25.3
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
-++||+||+.++|||.++.++||+..++
T Consensus 620 ~~~~s~~~~~l~s~~~d~~i~vw~~~~~ 647 (1249)
T 3sfz_A 620 HACFSQDGQRIASCGADKTLQVFKAETG 647 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 4699999999999999999999998654
No 106
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=90.31 E-value=0.2 Score=43.16 Aligned_cols=27 Identities=4% Similarity=0.134 Sum_probs=24.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
-++|||||+.++|||+++.++||+..+
T Consensus 22 ~lafspdg~~lAsgs~Dg~I~lw~~~~ 48 (902)
T 2oaj_A 22 AAAFDFTQNLLAIATVTGEVHIYGQQQ 48 (902)
T ss_dssp EEEEETTTTEEEEEETTSEEEEECSTT
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 469999999999999999999998754
No 107
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=90.23 E-value=0.11 Score=39.27 Aligned_cols=27 Identities=4% Similarity=0.097 Sum_probs=24.0
Q ss_pred eeEEcC--------CCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSG--------TDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sg--------d~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||| ||+.++|||.++.+||||...
T Consensus 141 ~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 141 DIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp EEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred EEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 478987 999999999999999999754
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=90.15 E-value=0.19 Score=38.00 Aligned_cols=29 Identities=21% Similarity=0.401 Sum_probs=24.9
Q ss_pred eeeEEcCCCC-eEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDS-AIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~-~v~TGSYnn~F~ifd~~~~ 56 (107)
..++|+|++. .++|||.++.++|||....
T Consensus 190 ~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 190 ISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred EEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 3579999985 7999999999999997643
No 109
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=90.15 E-value=0.38 Score=33.68 Aligned_cols=29 Identities=17% Similarity=0.145 Sum_probs=25.3
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..++||+||+++++++.++.++||+..+.
T Consensus 283 ~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp CEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred eeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 35799999999999999999999997654
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.09 E-value=0.24 Score=37.63 Aligned_cols=27 Identities=15% Similarity=0.383 Sum_probs=24.5
Q ss_pred eeeEEcCCCC-eEEecccCCeEEEeecC
Q psy13887 28 FEVCWSGTDS-AIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 28 Fec~~sgd~~-~v~TGSYnn~F~ifd~~ 54 (107)
..++|+|++. .++|||++|.++||+..
T Consensus 382 ~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 382 SDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred eEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 4579999999 99999999999999975
No 111
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=89.46 E-value=0.22 Score=38.99 Aligned_cols=26 Identities=15% Similarity=0.332 Sum_probs=23.8
Q ss_pred eeEEcCCCCeEE----ecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIM----TGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~----TGSYnn~F~ifd~~ 54 (107)
.++||+||++++ |||.++.++|||..
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~ 126 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVR 126 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHH
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEcc
Confidence 469999999999 99999999999864
No 112
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=89.20 E-value=0.16 Score=41.46 Aligned_cols=27 Identities=11% Similarity=0.124 Sum_probs=24.5
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
..++|||||..++|||.++.++||+..
T Consensus 401 ~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 401 TAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp EEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred EEEEeCCCCCeEEEEECCCEEEEEech
Confidence 357999999999999999999999864
No 113
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=89.20 E-value=0.47 Score=32.14 Aligned_cols=26 Identities=12% Similarity=0.230 Sum_probs=23.1
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|||||+++++++ ++.+.+|+..+
T Consensus 46 ~~~~spdg~~l~~~~-~~~i~~~d~~~ 71 (297)
T 2ojh_A 46 APNWSPDGKYLLLNS-EGLLYRLSLAG 71 (297)
T ss_dssp EEEECTTSSEEEEEE-TTEEEEEESSS
T ss_pred eeEECCCCCEEEEEc-CCeEEEEeCCC
Confidence 469999999999998 77899999876
No 114
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.13 E-value=0.23 Score=41.33 Aligned_cols=27 Identities=11% Similarity=0.145 Sum_probs=24.4
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||+||+.++|||+++.++||+..+
T Consensus 14 ~l~~s~dg~~latg~~dg~I~vwd~~~ 40 (753)
T 3jro_A 14 DAVLDYYGKRLATCSSDKTIKIFEVEG 40 (753)
T ss_dssp EECCCSSSCCEEEEETTTEEEEEEEET
T ss_pred EEEECCCCCeEEEEECCCcEEEEecCC
Confidence 368999999999999999999999763
No 115
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.01 E-value=0.38 Score=38.75 Aligned_cols=27 Identities=15% Similarity=0.274 Sum_probs=24.7
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|+|||..++|||.++.++||+..+
T Consensus 233 ~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 233 FAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 458999999999999999999999865
No 116
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.97 E-value=0.38 Score=41.16 Aligned_cols=28 Identities=25% Similarity=0.286 Sum_probs=25.4
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|||||++++|||.++.++|||..++
T Consensus 662 ~~~~s~~~~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 662 CCAFSSDDSYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEecCCCEEEEEeCCCeEEEEECCCC
Confidence 4799999999999999999999998653
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.66 E-value=0.41 Score=36.38 Aligned_cols=28 Identities=11% Similarity=0.297 Sum_probs=24.7
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
.++|| ||.+++|||.++.++|||...+.
T Consensus 246 ~~~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 246 SICCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp EEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred EEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 46999 99999999999999999987543
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=88.40 E-value=0.41 Score=36.36 Aligned_cols=28 Identities=11% Similarity=0.329 Sum_probs=25.7
Q ss_pred eeeEEcCCCC-eEEecccCCeEEEeecCC
Q psy13887 28 FEVCWSGTDS-AIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 28 Fec~~sgd~~-~v~TGSYnn~F~ifd~~~ 55 (107)
+.++|++++. .++||++++.++||+...
T Consensus 185 ~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 213 (430)
T 2xyi_A 185 YGLSWNPNLNGYLLSASDDHTICLWDINA 213 (430)
T ss_dssp CCEEECTTSTTEEEEECTTSCEEEEETTS
T ss_pred EEEEeCCCCCCeEEEEeCCCeEEEEeCCC
Confidence 5679999999 999999999999999875
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=88.40 E-value=0.45 Score=34.63 Aligned_cols=29 Identities=10% Similarity=0.170 Sum_probs=25.1
Q ss_pred eeeEEcCCCCeE-EecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAI-MTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v-~TGSYnn~F~ifd~~~~ 56 (107)
..++||+||+++ ++++.++.++|||....
T Consensus 247 ~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 247 AGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 357999999988 79999999999998754
No 120
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=88.01 E-value=0.6 Score=37.50 Aligned_cols=30 Identities=7% Similarity=-0.105 Sum_probs=25.6
Q ss_pred eeeEEcCCCCeEEeccc-CC-----eEEEeecCCCc
Q psy13887 28 FEVCWSGTDSAIMTGSY-NN-----FFRMFDRINKR 57 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSY-nn-----~F~ifd~~~~~ 57 (107)
..++|||||++++++|+ ++ .+.+|+..++.
T Consensus 40 ~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~ 75 (741)
T 2ecf_A 40 MKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ 75 (741)
T ss_dssp EEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC
T ss_pred CCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc
Confidence 35799999999999999 76 89999987654
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=87.59 E-value=0.61 Score=33.90 Aligned_cols=29 Identities=10% Similarity=0.164 Sum_probs=24.9
Q ss_pred eeeEEcCCCCeE-EecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAI-MTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v-~TGSYnn~F~ifd~~~~ 56 (107)
..++||+||+++ ++|+.++.+++||..+.
T Consensus 35 ~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~ 64 (391)
T 1l0q_A 35 MGAVISPDGTKVYVANAHSNDVSIIDTATN 64 (391)
T ss_dssp EEEEECTTSSEEEEEEGGGTEEEEEETTTT
T ss_pred ceEEECCCCCEEEEECCCCCeEEEEECCCC
Confidence 357999999987 89999999999997653
No 122
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=87.56 E-value=0.64 Score=35.06 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=23.1
Q ss_pred EEcCCCCeEEecccCCeEEEeecCC
Q psy13887 31 CWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 31 ~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
|++.||+.++|||+++.++||+..+
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~ 162 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNT 162 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSS
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCC
Confidence 8888999999999999999999764
No 123
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=87.53 E-value=0.52 Score=36.09 Aligned_cols=28 Identities=14% Similarity=0.389 Sum_probs=25.3
Q ss_pred eeEEcC----------CCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSG----------TDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sg----------d~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||| ||+.++|||.++.++||+....
T Consensus 536 ~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 536 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp EEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred EEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 469999 9999999999999999998653
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=87.13 E-value=0.35 Score=40.26 Aligned_cols=27 Identities=11% Similarity=0.210 Sum_probs=24.7
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|||||.+++|||.++.++||+...
T Consensus 259 ~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 259 RASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 569999999999999999999999763
No 125
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=86.95 E-value=0.39 Score=36.15 Aligned_cols=27 Identities=19% Similarity=0.432 Sum_probs=24.0
Q ss_pred eEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 30 VCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 30 c~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.|++.+|+.++|||.++.++||+....
T Consensus 123 ~~~~~~g~~l~sg~~dg~i~vwd~~~~ 149 (445)
T 2ovr_B 123 TCLQFCGNRIVSGSDDNTLKVWSAVTG 149 (445)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred EEEEEcCCEEEEEECCCcEEEEECCCC
Confidence 578889999999999999999997643
No 126
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=85.71 E-value=0.75 Score=37.41 Aligned_cols=28 Identities=7% Similarity=-0.020 Sum_probs=25.2
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
..++||||+..+++||.++.+++||...
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRA 386 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTC
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcc
Confidence 4589999999999999999999999654
No 127
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=85.67 E-value=0.97 Score=30.52 Aligned_cols=30 Identities=13% Similarity=0.055 Sum_probs=23.9
Q ss_pred eeeEEcCCCCeEEecccC-----------CeEEEeecCCCc
Q psy13887 28 FEVCWSGTDSAIMTGSYN-----------NFFRMFDRINKR 57 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYn-----------n~F~ifd~~~~~ 57 (107)
..++|||||+++++++.. +.+.+|+..++.
T Consensus 220 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 220 WFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp EEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred CCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 347999999999999986 568888876543
No 128
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=85.55 E-value=0.49 Score=37.24 Aligned_cols=30 Identities=3% Similarity=0.009 Sum_probs=25.8
Q ss_pred ceeeEEcCCCCeEEeccc-CCeEEEeecCCC
Q psy13887 27 KFEVCWSGTDSAIMTGSY-NNFFRMFDRINK 56 (107)
Q Consensus 27 KFec~~sgd~~~v~TGSY-nn~F~ifd~~~~ 56 (107)
-+.+++|+||+.|+++|+ ++..+||+..++
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g 54 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG 54 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETT
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCC
Confidence 467899999999999998 999999986543
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=85.52 E-value=0.61 Score=37.69 Aligned_cols=33 Identities=6% Similarity=0.139 Sum_probs=25.4
Q ss_pred eEEcC---CCCeEEecccCCeEEEeecCCCc-ceeEe
Q psy13887 30 VCWSG---TDSAIMTGSYNNFFRMFDRINKR-DATLE 62 (107)
Q Consensus 30 c~~sg---d~~~v~TGSYnn~F~ifd~~~~~-~~~Le 62 (107)
++||+ |+..+++||+++.++|||..+++ --+|+
T Consensus 184 l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~ 220 (356)
T 2w18_A 184 LTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMH 220 (356)
T ss_dssp EEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEc
Confidence 35555 77899999999999999987543 34554
No 130
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=85.32 E-value=0.65 Score=34.82 Aligned_cols=26 Identities=19% Similarity=0.428 Sum_probs=23.4
Q ss_pred eEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 30 VCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 30 c~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
++++++|..+++|| ++.++||+..++
T Consensus 397 ~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 397 TTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp EEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred EEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 58999999999999 999999998654
No 131
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=84.91 E-value=1 Score=31.70 Aligned_cols=27 Identities=15% Similarity=0.185 Sum_probs=23.9
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++||+||+++++++.++.+.|||..+
T Consensus 299 ~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 299 CVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred ceEECCCCCEEEEecCCCeEEEEeccc
Confidence 579999999999998899999999764
No 132
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=84.52 E-value=0.86 Score=33.59 Aligned_cols=27 Identities=11% Similarity=0.149 Sum_probs=22.8
Q ss_pred eeeEEcCCCCeEEecc-cCCeEEEeecC
Q psy13887 28 FEVCWSGTDSAIMTGS-YNNFFRMFDRI 54 (107)
Q Consensus 28 Fec~~sgd~~~v~TGS-Ynn~F~ifd~~ 54 (107)
..++|||||+++++++ .++.++||+.+
T Consensus 404 ~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 404 TGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 3569999999998776 59999999865
No 133
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=84.47 E-value=1.1 Score=32.50 Aligned_cols=29 Identities=14% Similarity=-0.044 Sum_probs=25.2
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
..+|||||++|+.++-+..+.+++..++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 56899999999999988889999987654
No 134
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=83.97 E-value=0.86 Score=36.66 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=24.2
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
..++|||||+.|+.++ ++.+++|+..++.
T Consensus 113 ~~~~~SPDG~~la~~~-~~~i~~~~~~~g~ 141 (719)
T 1z68_A 113 QYLCWSPVGSKLAYVY-QNNIYLKQRPGDP 141 (719)
T ss_dssp CCEEECSSTTCEEEEE-TTEEEEESSTTSC
T ss_pred ccceECCCCCEEEEEE-CCeEEEEeCCCCC
Confidence 3589999999999996 7889999986544
No 135
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=83.51 E-value=1.4 Score=36.25 Aligned_cols=40 Identities=10% Similarity=0.218 Sum_probs=29.5
Q ss_pred hhhhhccccccceeeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 16 CSLYENDCIFDKFEVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 16 cdLYEND~IFDKFec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
-|++.+.---..|.+.|||||++++++ ++.+++|+..++.
T Consensus 8 ~~~~~~~~~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~ 47 (740)
T 4a5s_A 8 TDYLKNTYRLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGN 47 (740)
T ss_dssp HHHHHTCSCCCCCCEEECSSSEEEEEE--TTEEEEEETTTCC
T ss_pred HHHhcCcccccccccEECCCCcEEEEc--CCcEEEEECCCCc
Confidence 344433222346789999999999997 8999999987654
No 136
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.94 E-value=1.4 Score=31.67 Aligned_cols=29 Identities=10% Similarity=-0.137 Sum_probs=24.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
.+.|||||++|+.++..+.+.+++..++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 37899999999999999889999977643
No 137
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=82.68 E-value=0.91 Score=34.21 Aligned_cols=25 Identities=16% Similarity=0.347 Sum_probs=18.9
Q ss_pred eEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 30 VCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 30 c~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
++| |+.+++|||.++.++||+..+.
T Consensus 391 l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 391 LQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp EEE--CSSCEEECCSSSEEEEEC----
T ss_pred EEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 455 8899999999999999997653
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=82.37 E-value=2.2 Score=30.62 Aligned_cols=27 Identities=7% Similarity=0.064 Sum_probs=21.9
Q ss_pred eeEEcCCCCeEEeccc-CCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSY-NNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSY-nn~F~ifd~~~ 55 (107)
.++|||||+++++++. ++.+.||+.+.
T Consensus 290 ~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 290 DFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred eEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 5789999998877766 58999996653
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=80.76 E-value=2.1 Score=30.70 Aligned_cols=27 Identities=11% Similarity=0.097 Sum_probs=22.8
Q ss_pred eeEEcCCCCeE-EecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAI-MTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v-~TGSYnn~F~ifd~~~ 55 (107)
.++|||||+++ ++++-++.+.||+...
T Consensus 244 ~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 244 AIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 37899999987 6777899999999763
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=80.33 E-value=2.5 Score=29.53 Aligned_cols=26 Identities=8% Similarity=-0.059 Sum_probs=23.4
Q ss_pred eeEEcCCCCeEEecccC-CeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYN-NFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYn-n~F~ifd~~ 54 (107)
.++|||||+++++++.. +.+.+|+..
T Consensus 42 ~~~~spdg~~l~~~~~~~~~v~~~~~~ 68 (343)
T 1ri6_A 42 PMVVSPDKRYLYVGVRPEFRVLAYRIA 68 (343)
T ss_dssp CEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eEEECCCCCEEEEeecCCCeEEEEEec
Confidence 47899999999999997 899999976
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=80.29 E-value=1.6 Score=35.01 Aligned_cols=28 Identities=7% Similarity=-0.082 Sum_probs=23.4
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..++|||||++|++++ ++.+.+|+..++
T Consensus 155 ~~~~~SPDG~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 155 TDAKLSPKGGFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp EEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred ccccCCCCCCEEEEEe-CCcEEEEecCCC
Confidence 4579999999999998 457899997654
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=79.99 E-value=1.2 Score=35.48 Aligned_cols=29 Identities=10% Similarity=0.103 Sum_probs=23.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCCcc
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINKRD 58 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~~~ 58 (107)
.++|||||+.|+++|. +.+.+|+..++..
T Consensus 118 ~~~~SPdG~~la~~~~-~~i~~~~~~~g~~ 146 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFE-NNIYYCAHVGKQA 146 (723)
T ss_dssp BCCBCSSTTCEEEEET-TEEEEESSSSSCC
T ss_pred ccEECCCCCEEEEEEC-CeEEEEECCCCce
Confidence 4789999999999997 6788998776443
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=79.16 E-value=1.2 Score=35.56 Aligned_cols=29 Identities=14% Similarity=0.225 Sum_probs=24.3
Q ss_pred ceeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 27 KFEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 27 KFec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
-+.++|||||+.+++ |.++.+++|+..++
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g 47 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETN 47 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGC
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCC
Confidence 467899999998877 67889999998754
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=79.15 E-value=2.3 Score=36.53 Aligned_cols=29 Identities=7% Similarity=-0.082 Sum_probs=26.0
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..++|||||+.+++++..+.+++||..++
T Consensus 382 ~~~~~SpDG~~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 382 FAMGVDRNGKFAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred eeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence 46799999999999999999999998654
No 145
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=78.65 E-value=3.2 Score=30.01 Aligned_cols=27 Identities=11% Similarity=0.256 Sum_probs=22.2
Q ss_pred eeEEcCCCCeEEecc-cCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGS-YNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGS-Ynn~F~ifd~~~ 55 (107)
.++|||||+++++++ .++.+.||..+.
T Consensus 310 ~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 310 NFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred eEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 468999999888777 789999987654
No 146
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=78.48 E-value=1.6 Score=32.80 Aligned_cols=27 Identities=22% Similarity=0.094 Sum_probs=23.7
Q ss_pred eeEEcCCCCeEEecccCCe----EEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNF----FRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~----F~ifd~~~ 55 (107)
.++|||+|..+++||.++. +.|||-..
T Consensus 412 ~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 412 RIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 4689999999999999997 99998653
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=77.89 E-value=1.8 Score=34.56 Aligned_cols=26 Identities=8% Similarity=-0.023 Sum_probs=22.7
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
.++|||||+.|++ +.++.+.||+..+
T Consensus 125 ~~~~SpdG~~la~-~~~~~i~v~~~~~ 150 (706)
T 2z3z_A 125 SLDFSPVGDRVAY-VRNHNLYIARGGK 150 (706)
T ss_dssp TCEECTTSSEEEE-EETTEEEEEECBC
T ss_pred CCcCCCCCCEEEE-EECCeEEEEecCc
Confidence 4799999999999 5789999999866
No 148
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=77.77 E-value=2 Score=32.87 Aligned_cols=29 Identities=3% Similarity=0.033 Sum_probs=23.6
Q ss_pred ceeeEEcCCCCeEEecccCC---eEEEeecCC
Q psy13887 27 KFEVCWSGTDSAIMTGSYNN---FFRMFDRIN 55 (107)
Q Consensus 27 KFec~~sgd~~~v~TGSYnn---~F~ifd~~~ 55 (107)
-..++|||||+.|+++|..+ .+.+|+..+
T Consensus 356 ~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 356 DETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp CEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred cCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 45679999999999999877 678887654
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=77.10 E-value=2.3 Score=29.72 Aligned_cols=27 Identities=11% Similarity=0.094 Sum_probs=22.1
Q ss_pred eeeEEcCCCCeEEeccc-CCeEEEeecC
Q psy13887 28 FEVCWSGTDSAIMTGSY-NNFFRMFDRI 54 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSY-nn~F~ifd~~ 54 (107)
..++||+||++++++++ ++.+.+|+..
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 34689999999877776 7789999873
No 150
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=77.04 E-value=1.6 Score=31.63 Aligned_cols=27 Identities=15% Similarity=0.404 Sum_probs=20.6
Q ss_pred eEEcCCCCeEEeccc-CCe--EEEeecCCC
Q psy13887 30 VCWSGTDSAIMTGSY-NNF--FRMFDRINK 56 (107)
Q Consensus 30 c~~sgd~~~v~TGSY-nn~--F~ifd~~~~ 56 (107)
.+|||||++|+.+|. ++. +.+++..++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g 70 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ 70 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCC
Confidence 689999999999998 564 555565543
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=76.68 E-value=1.7 Score=34.20 Aligned_cols=34 Identities=6% Similarity=-0.162 Sum_probs=26.6
Q ss_pred eeeEEcCCCCeEEecccC----CeEEEeecCCCcceeE
Q psy13887 28 FEVCWSGTDSAIMTGSYN----NFFRMFDRINKRDATL 61 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYn----n~F~ifd~~~~~~~~L 61 (107)
...+|||||+.++++|.. ..+.+||..++.-.+|
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l 190 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF 190 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe
Confidence 788999999999998887 6788888765443333
No 152
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=76.48 E-value=2.9 Score=29.52 Aligned_cols=27 Identities=7% Similarity=0.281 Sum_probs=21.9
Q ss_pred eeEEcCCCCeEE-ecccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIM-TGSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~-TGSYnn~F~ifd~~~ 55 (107)
.++|||||+++. +++-++.+.||+...
T Consensus 277 ~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 277 QMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp CEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred ceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 469999999874 566678999999764
No 153
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=75.70 E-value=1.8 Score=31.81 Aligned_cols=26 Identities=12% Similarity=0.137 Sum_probs=24.0
Q ss_pred eEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 30 VCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 30 c~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
++|+++|..++||+.++.+++|+..+
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred EEEcCCCEEEEEECCCCEEEEEECCC
Confidence 68999999999999999999999765
No 154
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=75.60 E-value=2.8 Score=34.23 Aligned_cols=31 Identities=6% Similarity=-0.110 Sum_probs=26.3
Q ss_pred eeeEEcCCCCeEE-----ecccCCeEEEeecCCCcc
Q psy13887 28 FEVCWSGTDSAIM-----TGSYNNFFRMFDRINKRD 58 (107)
Q Consensus 28 Fec~~sgd~~~v~-----TGSYnn~F~ifd~~~~~~ 58 (107)
..+.|||||++++ +||-...++|+|..++..
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~ 159 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEW 159 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCB
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCC
Confidence 3569999999999 898888999999877544
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=75.22 E-value=3.5 Score=33.06 Aligned_cols=30 Identities=10% Similarity=0.199 Sum_probs=23.6
Q ss_pred ceeeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 27 KFEVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 27 KFec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
-+.++||+||+.+.++ .++.+++|+..++.
T Consensus 18 ~~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~ 47 (719)
T 1z68_A 18 TFFPNWISGQEYLHQS-ADNNIVLYNIETGQ 47 (719)
T ss_dssp CCCCEESSSSEEEEEC-TTSCEEEEESSSCC
T ss_pred CCccEECCCCeEEEEc-CCCCEEEEEcCCCc
Confidence 4688999999655555 59999999987654
No 156
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=75.02 E-value=2.6 Score=30.31 Aligned_cols=29 Identities=17% Similarity=0.117 Sum_probs=22.9
Q ss_pred eeEEcCCCCeEEecccC-----CeEEEeecCCCc
Q psy13887 29 EVCWSGTDSAIMTGSYN-----NFFRMFDRINKR 57 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYn-----n~F~ifd~~~~~ 57 (107)
.++|||||++|+.+++. +.+.+|+..++.
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCC
Confidence 46999999999988876 458899876543
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=74.55 E-value=3.8 Score=28.49 Aligned_cols=26 Identities=12% Similarity=0.150 Sum_probs=22.7
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++||+||++++++ ++.+.+||..+.
T Consensus 245 ~~~~s~dg~~l~~~--~~~v~~~d~~~~ 270 (337)
T 1pby_B 245 STAVNPAKTRAFGA--YNVLESFDLEKN 270 (337)
T ss_dssp EEEECTTSSEEEEE--ESEEEEEETTTT
T ss_pred eEEECCCCCEEEEe--CCeEEEEECCCC
Confidence 38999999999999 799999998654
No 158
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=74.47 E-value=3.2 Score=29.55 Aligned_cols=30 Identities=13% Similarity=-0.185 Sum_probs=21.7
Q ss_pred eeeEEcCCCCeEEecccC-----CeEEEeecCCCc
Q psy13887 28 FEVCWSGTDSAIMTGSYN-----NFFRMFDRINKR 57 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYn-----n~F~ifd~~~~~ 57 (107)
..++|||||++|+..+.. ..+.+++..++.
T Consensus 62 ~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~ 96 (347)
T 2gop_A 62 TMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS 96 (347)
T ss_dssp EEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE
T ss_pred CCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc
Confidence 347999999999998864 246666765543
No 159
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=73.24 E-value=3.4 Score=31.13 Aligned_cols=28 Identities=7% Similarity=0.065 Sum_probs=24.1
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..+.+|+||+++.+++. |.+.|||..+.
T Consensus 308 ~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 308 LSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp CEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred eEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 46789999999999998 99999997653
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=73.06 E-value=3.7 Score=32.76 Aligned_cols=28 Identities=14% Similarity=0.347 Sum_probs=24.2
Q ss_pred eeEEcCCCCeEEecccCC-----eEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNN-----FFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn-----~F~ifd~~~~ 56 (107)
.++|||||+.|++++.+. .+.+||..++
T Consensus 262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 589999999999998875 8889987765
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=72.82 E-value=6.4 Score=28.40 Aligned_cols=26 Identities=8% Similarity=0.073 Sum_probs=21.6
Q ss_pred eeEEcCCCCeEEeccc--CCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSY--NNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSY--nn~F~ifd~~ 54 (107)
.++|||||+++..++. ++.+.||+..
T Consensus 263 ~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 263 DIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred cEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 7899999999865555 5899999986
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=72.26 E-value=4.7 Score=28.26 Aligned_cols=27 Identities=19% Similarity=0.089 Sum_probs=23.3
Q ss_pred eeeEEcC-CCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSG-TDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sg-d~~~v~TGSYnn~F~ifd~~~~ 56 (107)
+.+++|| ||+.+.++ ++.+.+||..+.
T Consensus 258 ~~~~~sp~dg~~l~~~--~~~v~~~d~~~~ 285 (349)
T 1jmx_B 258 FTGLRSPKDPNQIYGV--LNRLAKYDLKQR 285 (349)
T ss_dssp EEEEECSSCTTEEEEE--ESEEEEEETTTT
T ss_pred eeeEecCCCCCEEEEE--cCeEEEEECccC
Confidence 4679999 99999999 889999998654
No 163
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=71.69 E-value=3.9 Score=28.80 Aligned_cols=29 Identities=7% Similarity=0.084 Sum_probs=25.2
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..++||+||+.+.+++.++.+.+||..+.
T Consensus 188 ~~~~~s~dg~~l~~~~~~~~i~~~d~~~~ 216 (353)
T 3vgz_A 188 TGLALDSEGKRLYTTNADGELITIDTADN 216 (353)
T ss_dssp CCCEEETTTTEEEEECTTSEEEEEETTTT
T ss_pred ceEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 35689999999999999999999997654
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=70.86 E-value=2.7 Score=33.27 Aligned_cols=28 Identities=4% Similarity=-0.076 Sum_probs=23.3
Q ss_pred eeeEEcCCCCeEEecccC----------CeEEEeecCC
Q psy13887 28 FEVCWSGTDSAIMTGSYN----------NFFRMFDRIN 55 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYn----------n~F~ifd~~~ 55 (107)
..++|||||+.|+.+|.. +.+.+|+..+
T Consensus 133 ~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 133 ADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred cCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 357999999999999987 5777888766
No 165
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=70.74 E-value=5.3 Score=28.39 Aligned_cols=18 Identities=6% Similarity=0.335 Sum_probs=14.9
Q ss_pred eeeEEcCCCCeEEecccC
Q psy13887 28 FEVCWSGTDSAIMTGSYN 45 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYn 45 (107)
..++|||||+.|+.++..
T Consensus 107 ~~~~wspdg~~l~~~~~~ 124 (347)
T 2gop_A 107 RSLEWNEDSRKLLIVGFK 124 (347)
T ss_dssp EEEEECTTSSEEEEEEEC
T ss_pred cceeECCCCCEEEEEEcc
Confidence 356999999999998853
No 166
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=70.39 E-value=5.8 Score=27.90 Aligned_cols=30 Identities=10% Similarity=0.264 Sum_probs=23.9
Q ss_pred eeeEEcCCCCe-EEecccCCeEEEeecCCCc
Q psy13887 28 FEVCWSGTDSA-IMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 28 Fec~~sgd~~~-v~TGSYnn~F~ifd~~~~~ 57 (107)
..++|||||++ +++++.++.++||+..+..
T Consensus 179 ~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 179 FNITFTPDGNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEECSSTT
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 56799999995 4667778999999986543
No 167
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=70.21 E-value=4.7 Score=32.87 Aligned_cols=30 Identities=7% Similarity=0.092 Sum_probs=23.9
Q ss_pred eeEEcCCCCeEEecccCC-----eEEEeecCCCcc
Q psy13887 29 EVCWSGTDSAIMTGSYNN-----FFRMFDRINKRD 58 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn-----~F~ifd~~~~~~ 58 (107)
.++|||||++|+.++-.+ .++|+|..++..
T Consensus 129 ~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~ 163 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE 163 (710)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE
T ss_pred EEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC
Confidence 579999999999766544 899999877643
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=69.73 E-value=4.2 Score=33.43 Aligned_cols=29 Identities=21% Similarity=0.079 Sum_probs=23.8
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCCc
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINKR 57 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~~ 57 (107)
....|||||+.|+-+ .++.+.|++..++.
T Consensus 115 ~~~~~SPdG~~la~~-~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 115 QWVTWSPVGHKLAYV-WNNDIYVKIEPNLP 143 (740)
T ss_dssp EEEEECSSTTCEEEE-ETTEEEEESSTTSC
T ss_pred eeeEECCCCCEEEEE-ECCeEEEEECCCCc
Confidence 567999999999998 57888899876544
No 169
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=69.40 E-value=4.1 Score=32.89 Aligned_cols=25 Identities=12% Similarity=0.028 Sum_probs=23.6
Q ss_pred eeEEcCCCCeEEecccCCeEEEeec
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDR 53 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~ 53 (107)
.+.+||||+++.++|..+.+++||.
T Consensus 183 ~v~~spdg~~l~v~~~d~~V~v~D~ 207 (543)
T 1nir_A 183 ISRMSASGRYLLVIGRDARIDMIDL 207 (543)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEET
T ss_pred eEEECCCCCEEEEECCCCeEEEEEC
Confidence 4679999999999999999999998
No 170
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=68.60 E-value=5.8 Score=32.62 Aligned_cols=29 Identities=17% Similarity=0.211 Sum_probs=24.9
Q ss_pred eEEcCCCCeEE-----ecccCCeEEEeecCCCcc
Q psy13887 30 VCWSGTDSAIM-----TGSYNNFFRMFDRINKRD 58 (107)
Q Consensus 30 c~~sgd~~~v~-----TGSYnn~F~ifd~~~~~~ 58 (107)
.+|||||++++ .||-...++|+|..+++.
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~ 167 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP 167 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCC
Confidence 48999999999 788778999999887653
No 171
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=67.20 E-value=3.9 Score=35.12 Aligned_cols=29 Identities=14% Similarity=0.099 Sum_probs=24.1
Q ss_pred eeeEEcCCCCeEEecccCC----------eEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNN----------FFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn----------~F~ifd~~~~ 56 (107)
..++|||||+++++++.++ .+++||..++
T Consensus 424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 4679999999999988754 8999998754
No 172
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=66.82 E-value=5.9 Score=31.95 Aligned_cols=28 Identities=25% Similarity=0.275 Sum_probs=24.8
Q ss_pred eeeEEcC----CCCeEEeccc-CCeEEEeecCC
Q psy13887 28 FEVCWSG----TDSAIMTGSY-NNFFRMFDRIN 55 (107)
Q Consensus 28 Fec~~sg----d~~~v~TGSY-nn~F~ifd~~~ 55 (107)
..+++|| ||+++++++| ++.+.|||..+
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 5679999 9999999998 79999999754
No 173
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=66.38 E-value=6.1 Score=32.52 Aligned_cols=32 Identities=3% Similarity=-0.020 Sum_probs=25.0
Q ss_pred eeEEcCCCCeEEecccC-----CeEEEeecCCCccee
Q psy13887 29 EVCWSGTDSAIMTGSYN-----NFFRMFDRINKRDAT 60 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYn-----n~F~ifd~~~~~~~~ 60 (107)
..+|||||++|+.++.. ..++|+|..++..+.
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~ 203 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLA 203 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEE
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCC
Confidence 46999999999987764 469999988765443
No 174
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=65.70 E-value=4.7 Score=29.71 Aligned_cols=28 Identities=7% Similarity=0.135 Sum_probs=23.2
Q ss_pred eeEEcC---CCCeEEecccC-CeEEEeecCCC
Q psy13887 29 EVCWSG---TDSAIMTGSYN-NFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sg---d~~~v~TGSYn-n~F~ifd~~~~ 56 (107)
.++||| ||++++.++.+ |.+.||+.+..
T Consensus 311 ~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 311 SNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 357789 89999998875 89999998764
No 175
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=65.38 E-value=9.7 Score=26.73 Aligned_cols=27 Identities=7% Similarity=-0.005 Sum_probs=21.7
Q ss_pred eEEcCCCCeEEeccc-CCeEEEeecCCC
Q psy13887 30 VCWSGTDSAIMTGSY-NNFFRMFDRINK 56 (107)
Q Consensus 30 c~~sgd~~~v~TGSY-nn~F~ifd~~~~ 56 (107)
++||+||+++..++. ++.+.+||..+.
T Consensus 236 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 236 ISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp EEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 799999997766665 499999998654
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=64.95 E-value=5.6 Score=29.91 Aligned_cols=28 Identities=7% Similarity=-0.065 Sum_probs=24.1
Q ss_pred eeEEcCCCCeEEeccc--CCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSY--NNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSY--nn~F~ifd~~~~ 56 (107)
.+.+|+||+++.+++| +|.+.|||....
T Consensus 112 ~i~~spdg~~l~v~n~~~~~~v~v~d~~~~ 141 (361)
T 2oiz_A 112 LFRQTTDGKFIVLQNASPATSIGIVDVAKG 141 (361)
T ss_dssp GEEECTTSSEEEEEEESSSEEEEEEETTTT
T ss_pred eEEECCCCCEEEEECCCCCCeEEEEECCCC
Confidence 5789999999999997 489999998654
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=62.69 E-value=7.2 Score=27.43 Aligned_cols=26 Identities=4% Similarity=0.047 Sum_probs=23.7
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++||+||+.+++++.++.+.+|+..
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 47999999999999999999999975
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=62.66 E-value=7.7 Score=31.57 Aligned_cols=30 Identities=7% Similarity=-0.024 Sum_probs=24.1
Q ss_pred eeeEEcCCCCeEEecccCCe-------------EEEeecCCCc
Q psy13887 28 FEVCWSGTDSAIMTGSYNNF-------------FRMFDRINKR 57 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~-------------F~ifd~~~~~ 57 (107)
..++|||||+.|+.+|+... +.+|+..+..
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc
Confidence 46899999999999998665 7788776543
No 179
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=62.43 E-value=6.3 Score=29.02 Aligned_cols=25 Identities=8% Similarity=0.070 Sum_probs=22.4
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.++|||||+++.++++. .+.+|+..
T Consensus 44 ~~a~spdg~~l~~~~~~-~v~~~~~~ 68 (365)
T 1jof_A 44 WMTFDHERKNIYGAAMK-KWSSFAVK 68 (365)
T ss_dssp EEEECTTSSEEEEEEBT-EEEEEEEE
T ss_pred EEEECCCCCEEEEEccc-eEEEEEEC
Confidence 47899999999999998 89999975
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=60.98 E-value=8.9 Score=26.64 Aligned_cols=25 Identities=12% Similarity=0.268 Sum_probs=21.0
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.+++++||..++| +.++.++||+..
T Consensus 255 ~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 255 DVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp EEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred eEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 5789999988888 579999999764
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=60.54 E-value=14 Score=25.63 Aligned_cols=29 Identities=14% Similarity=0.245 Sum_probs=24.5
Q ss_pred eeeEEcCCCCeEEecccCC-eEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNN-FFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn-~F~ifd~~~~ 56 (107)
..+++++||..+++.+.+| .+.+|+..+.
T Consensus 210 ~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 210 IGVGINSNGEILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEECTTSC
T ss_pred cEEEECCCCCEEEEeCCCCEEEEEECCCCC
Confidence 3579999999999999987 9999996543
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=58.47 E-value=14 Score=26.15 Aligned_cols=28 Identities=4% Similarity=0.074 Sum_probs=23.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.++|++||+..+++++++.+.+|+..++
T Consensus 49 ~~~~~~~g~l~~~~~~~~~i~~~d~~~~ 76 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVFEGNIFKINPETK 76 (333)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CcEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 3589999998889999999999987654
No 183
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=56.15 E-value=14 Score=28.35 Aligned_cols=28 Identities=7% Similarity=0.116 Sum_probs=23.8
Q ss_pred eeEEcCCCC-eEEeccc-CCeEEEeecCCC
Q psy13887 29 EVCWSGTDS-AIMTGSY-NNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~-~v~TGSY-nn~F~ifd~~~~ 56 (107)
.+.||+||+ .+.++.+ +|.+.|||..+.
T Consensus 322 ~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 322 AISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 458999999 8888886 899999998654
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=54.70 E-value=11 Score=30.68 Aligned_cols=28 Identities=7% Similarity=0.170 Sum_probs=22.8
Q ss_pred eeEEcCCCCeEEecccCCe----------------EEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNF----------------FRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~----------------F~ifd~~~~ 56 (107)
.++|||||+.|+.+++... +.+++..+.
T Consensus 175 ~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 175 CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD 218 (710)
T ss_dssp CEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC
T ss_pred eEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCC
Confidence 4799999999999998765 777777654
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=52.66 E-value=13 Score=25.22 Aligned_cols=28 Identities=7% Similarity=0.096 Sum_probs=24.2
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
..+++++||...++.+.++.+++|+...
T Consensus 237 ~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 237 LAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred eeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 4578999999999999999999998753
No 186
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=52.35 E-value=7.6 Score=30.95 Aligned_cols=27 Identities=11% Similarity=0.042 Sum_probs=21.4
Q ss_pred eee-EEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEV-CWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec-~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..| ||||+| ++-|.-+|..++|+..+.
T Consensus 165 Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 165 VTSFDVTNSQ--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp EEEEEECSSE--EEEEETTSCEEEEEEETT
T ss_pred ceEEEEcCCc--eEEEEcCCcEEEEcCCCc
Confidence 344 999999 556888999999976553
No 187
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=51.37 E-value=11 Score=27.47 Aligned_cols=28 Identities=11% Similarity=0.112 Sum_probs=24.6
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
..+++++||..+++.+.+|.+++|+..+
T Consensus 295 ~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 295 HDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 4579999999999999999999998754
No 188
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=50.07 E-value=1.9 Score=33.73 Aligned_cols=15 Identities=53% Similarity=0.981 Sum_probs=12.5
Q ss_pred HHhhhhhhhcccccc
Q psy13887 12 RSKLCSLYENDCIFD 26 (107)
Q Consensus 12 r~kLcdLYEND~IFD 26 (107)
|.+.|---||||||+
T Consensus 94 RqRMcMKlE~D~iF~ 108 (253)
T 2yew_A 94 RMRNCMKIENDCIFP 108 (253)
T ss_dssp CCCSCCCCSCCSCEE
T ss_pred hhhhhhhhhcCceee
Confidence 557788889999986
No 189
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=46.81 E-value=22 Score=25.78 Aligned_cols=28 Identities=11% Similarity=-0.051 Sum_probs=24.9
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
.+++++||+.++|.+.++.+++|+..+.
T Consensus 95 gia~d~~g~l~v~d~~~~~v~~~~~~g~ 122 (329)
T 3fvz_A 95 GLSIDTDGNYWVTDVALHQVFKLDPHSK 122 (329)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCS
T ss_pred EEEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 4789999999999999999999997654
No 190
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=46.69 E-value=19 Score=27.51 Aligned_cols=27 Identities=0% Similarity=-0.080 Sum_probs=23.0
Q ss_pred eeEEcCCCCeEEeccc--CCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSY--NNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSY--nn~F~ifd~~~~ 56 (107)
...|||||+++...++ +|.+.|+| .+.
T Consensus 129 ~~~~spDG~~l~v~n~~~~~~v~viD-~t~ 157 (373)
T 2mad_H 129 MNANTPNNADLLFFQFAAGPAVGLVV-QGG 157 (373)
T ss_pred ceEECCCCCEEEEEecCCCCeEEEEE-CCC
Confidence 5789999999999886 58899999 654
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=45.69 E-value=14 Score=25.85 Aligned_cols=27 Identities=11% Similarity=0.069 Sum_probs=23.5
Q ss_pred eEEcCCCC-eEEecccCCeEEEeecCCC
Q psy13887 30 VCWSGTDS-AIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 30 c~~sgd~~-~v~TGSYnn~F~ifd~~~~ 56 (107)
++|++||+ .+.+++.++.+.+|+..++
T Consensus 33 ~~~d~~g~~l~~~~~~~~~i~~~~~~~~ 60 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQNRTWAWSDDGQ 60 (296)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTSC
T ss_pred CeEeCCCCEEEEEeCCCCEEEEEECCCC
Confidence 59999998 7889999999999987654
No 192
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=44.75 E-value=3.8 Score=32.29 Aligned_cols=17 Identities=29% Similarity=0.432 Sum_probs=11.8
Q ss_pred HHhhhhhhhccccccce
Q psy13887 12 RSKLCSLYENDCIFDKF 28 (107)
Q Consensus 12 r~kLcdLYEND~IFDKF 28 (107)
|.+.|--.|||||||=-
T Consensus 103 RqRM~MKlE~D~~F~Vk 119 (264)
T 1kxf_A 103 RQRMALKLEADRLFDVK 119 (264)
T ss_dssp ---CCCCCCCSCEEEEE
T ss_pred hhhhhhhhhccceeeee
Confidence 66788889999999743
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=44.54 E-value=15 Score=26.60 Aligned_cols=23 Identities=17% Similarity=0.186 Sum_probs=19.3
Q ss_pred cCCCCeEEecccCCeEEEeecCC
Q psy13887 33 SGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 33 sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
|..|+.|++||.++.+.+||.++
T Consensus 2 ~~~~~~lv~~~~~~~v~~~d~~t 24 (276)
T 3no2_A 2 SSPQHLLVGGSGWNKIAIINKDT 24 (276)
T ss_dssp -CCCEEEEECTTCSEEEEEETTT
T ss_pred CCCCcEEEeeCCCCEEEEEECCC
Confidence 45678999999999999999843
No 194
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=44.39 E-value=17 Score=28.72 Aligned_cols=27 Identities=11% Similarity=0.250 Sum_probs=21.3
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
...+|||||+.+++++.++.++||-..
T Consensus 245 ~~~~~spdg~l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 245 AQAEWAPDGSLIVATDRTGWWNLHRVD 271 (662)
T ss_dssp EEEEECTTSCEEEEECTTSSCEEEEEC
T ss_pred cceEECCCCeEEEEECCCCCeEEEEEE
Confidence 457999999988999988866666543
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=39.16 E-value=39 Score=27.77 Aligned_cols=26 Identities=12% Similarity=-0.004 Sum_probs=23.8
Q ss_pred eeEEcCCCCeEEecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAIMTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v~TGSYnn~F~ifd~~ 54 (107)
.+.+|+||+++.+++-++.+.+||..
T Consensus 201 ~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 201 ISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETT
T ss_pred ceEECCCCCEEEEEcCCCeEEEEECC
Confidence 57899999999999999999999984
No 196
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=38.69 E-value=13 Score=26.12 Aligned_cols=12 Identities=33% Similarity=0.421 Sum_probs=10.6
Q ss_pred CCCCeEEecccC
Q psy13887 34 GTDSAIMTGSYN 45 (107)
Q Consensus 34 gd~~~v~TGSYn 45 (107)
.|+..++|||+|
T Consensus 162 ~D~~~v~~GS~N 173 (220)
T 4gel_A 162 PCYSIVISGSVN 173 (220)
T ss_dssp CCCCEEEEESCC
T ss_pred cccceEEecCcc
Confidence 378999999998
No 197
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=38.51 E-value=17 Score=25.88 Aligned_cols=19 Identities=32% Similarity=0.653 Sum_probs=16.5
Q ss_pred cccceeeEEcCCCCeEEecccC
Q psy13887 24 IFDKFEVCWSGTDSAIMTGSYN 45 (107)
Q Consensus 24 IFDKFec~~sgd~~~v~TGSYn 45 (107)
+..||=+. ||+.+.|||+|
T Consensus 123 ~H~K~~vi---D~~~~~~GS~N 141 (196)
T 4ggj_A 123 MHHKFAIV---DKKVLITGSLN 141 (196)
T ss_dssp CCCEEEEE---TTTEEEEESCC
T ss_pred ccCcEEEE---cceEEEecCcc
Confidence 46888777 99999999998
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=35.62 E-value=32 Score=24.44 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=22.0
Q ss_pred eeEEcCCCCeE-EecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAI-MTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v-~TGSYnn~F~ifd~~ 54 (107)
.++||+||+.+ ++.+.++.+.+|+..
T Consensus 153 gi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 153 GLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred ceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 57999999865 788899999999864
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=35.41 E-value=35 Score=24.67 Aligned_cols=26 Identities=4% Similarity=-0.134 Sum_probs=22.5
Q ss_pred eEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 30 VCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 30 c~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
+++++||..+++.+.++.+.+||..+
T Consensus 130 v~~~~~G~~lv~~~~~~~v~~~d~~G 155 (276)
T 3no2_A 130 INKNKKGNYLVPLFATSEVREIAPNG 155 (276)
T ss_dssp CEECTTSCEEEEETTTTEEEEECTTS
T ss_pred ceECCCCCEEEEecCCCEEEEECCCC
Confidence 46788999999999999999999874
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=33.52 E-value=45 Score=27.32 Aligned_cols=29 Identities=14% Similarity=-0.019 Sum_probs=22.1
Q ss_pred eeeEEcCCCCeEEeccc-----CCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSY-----NNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSY-----nn~F~ifd~~~~ 56 (107)
..+.||+||++|+..+. ++.+.+++..++
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 46789999999998875 347778876543
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=31.72 E-value=63 Score=22.21 Aligned_cols=27 Identities=7% Similarity=0.000 Sum_probs=22.7
Q ss_pred eeEEcCCCCeEEe-------cccCCeEEEeecCC
Q psy13887 29 EVCWSGTDSAIMT-------GSYNNFFRMFDRIN 55 (107)
Q Consensus 29 ec~~sgd~~~v~T-------GSYnn~F~ifd~~~ 55 (107)
.++|+++|...++ ++.++.+.+|+..+
T Consensus 22 ~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~ 55 (314)
T 1pjx_A 22 GPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT 55 (314)
T ss_dssp EEEECTTSCEEEEETTCEETTEECCEEEEECTTT
T ss_pred CceECCCCCEEEEEeccccCCCCCCEEEEEeCCC
Confidence 5689999998888 88999999998644
No 202
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=29.94 E-value=63 Score=23.46 Aligned_cols=38 Identities=3% Similarity=-0.086 Sum_probs=26.2
Q ss_pred eEEcC-CCCeEEec----ccCCeEEEeecCCCcceeEeeeccc
Q psy13887 30 VCWSG-TDSAIMTG----SYNNFFRMFDRINKRDATLEAAREI 67 (107)
Q Consensus 30 c~~sg-d~~~v~TG----SYnn~F~ifd~~~~~~~~LeAsk~~ 67 (107)
++++| ++...++. +.++.+.+|+..++---++++-..|
T Consensus 272 i~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~G~~P 314 (328)
T 3dsm_A 272 LTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVGIIP 314 (328)
T ss_dssp EEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEEEESE
T ss_pred EEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEeccCc
Confidence 68998 66666777 6799999999875433445544443
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=28.77 E-value=49 Score=26.31 Aligned_cols=29 Identities=7% Similarity=0.084 Sum_probs=24.3
Q ss_pred eeeEEcCCCCeEEeccc--CCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSY--NNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSY--nn~F~ifd~~~~ 56 (107)
+...+||||+++...++ +|.+.|+|....
T Consensus 140 ~~~a~spDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 140 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp GGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred ceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 45799999999888876 689999998764
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=28.53 E-value=62 Score=21.75 Aligned_cols=29 Identities=14% Similarity=0.070 Sum_probs=24.3
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..++++++|+..++.+.++.+.+|+..+.
T Consensus 153 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred eeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 45789999998888888999999997653
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=26.68 E-value=60 Score=23.53 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=21.0
Q ss_pred eeEEcCCCCeE-EecccCCeEEEeecC
Q psy13887 29 EVCWSGTDSAI-MTGSYNNFFRMFDRI 54 (107)
Q Consensus 29 ec~~sgd~~~v-~TGSYnn~F~ifd~~ 54 (107)
.++||+||+.+ ++.+.++.+.+|+..
T Consensus 183 ~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 56899999865 667778899999864
No 206
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=25.24 E-value=42 Score=21.77 Aligned_cols=20 Identities=30% Similarity=0.474 Sum_probs=16.7
Q ss_pred ccccceeeEEcCCCCeEEecccC
Q psy13887 23 CIFDKFEVCWSGTDSAIMTGSYN 45 (107)
Q Consensus 23 ~IFDKFec~~sgd~~~v~TGSYn 45 (107)
.+..||=+. |++.+++||+|
T Consensus 92 ~~H~K~~ii---D~~~~~iGS~N 111 (155)
T 1byr_A 92 IQHDKVIIV---DNVTVETGSFN 111 (155)
T ss_dssp CCCCCEEEE---TTTEEEEESCC
T ss_pred cccceEEEE---CCCEEEEECCC
Confidence 566788777 89999999987
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=25.00 E-value=71 Score=24.46 Aligned_cols=29 Identities=7% Similarity=0.155 Sum_probs=25.1
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..++|+++|+..++.+.++.+++|+..++
T Consensus 134 ~~la~d~~g~lyv~d~~~~~I~~id~~~g 162 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDDPRVRLISVDDN 162 (409)
T ss_dssp EEEEECSTTEEEEEETTTTEEEEEETTTT
T ss_pred eEEEEeCCCCEEEEecCCCcEEEEECCCC
Confidence 35689999999999999999999998653
No 208
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=24.29 E-value=89 Score=22.63 Aligned_cols=29 Identities=7% Similarity=0.051 Sum_probs=22.9
Q ss_pred eeeEEcCCCCeEEecccCCeEEEeecCCC
Q psy13887 28 FEVCWSGTDSAIMTGSYNNFFRMFDRINK 56 (107)
Q Consensus 28 Fec~~sgd~~~v~TGSYnn~F~ifd~~~~ 56 (107)
..+++|+||+..++.+|++.+.+||..+.
T Consensus 87 ~~i~~~~~g~lyv~~~~~~~v~~iD~~t~ 115 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIWDYRIFIINPKTY 115 (328)
T ss_dssp EEEEEEETTEEEEEEBSCSEEEEEETTTT
T ss_pred cEEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence 35688888877777779999999998654
No 209
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=23.78 E-value=57 Score=26.80 Aligned_cols=28 Identities=18% Similarity=0.165 Sum_probs=23.6
Q ss_pred eeeEEc----CCCCeEEecccC-CeEEEeecCC
Q psy13887 28 FEVCWS----GTDSAIMTGSYN-NFFRMFDRIN 55 (107)
Q Consensus 28 Fec~~s----gd~~~v~TGSYn-n~F~ifd~~~ 55 (107)
..+.+| |||+++.+++|. |.+.|||..+
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 456899 699999999987 8999999654
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=23.71 E-value=79 Score=25.28 Aligned_cols=28 Identities=11% Similarity=0.115 Sum_probs=23.6
Q ss_pred eeEEcCCCC-eEEeccc-CCeEEEeecCCC
Q psy13887 29 EVCWSGTDS-AIMTGSY-NNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~-~v~TGSY-nn~F~ifd~~~~ 56 (107)
.+.+++||+ .+.+..+ +|.+.|+|..+.
T Consensus 374 gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 374 SINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred eEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 357899999 8888886 899999998654
No 211
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=23.23 E-value=48 Score=24.71 Aligned_cols=53 Identities=23% Similarity=0.315 Sum_probs=28.1
Q ss_pred CCcccchHHHHHhhhhhhhcc-ccccceeeEEcCCCCeEEecccCCeEEEeecCCCcceeEee
Q psy13887 2 FPSPQVHEYLRSKLCSLYEND-CIFDKFEVCWSGTDSAIMTGSYNNFFRMFDRINKRDATLEA 63 (107)
Q Consensus 2 v~t~~vhe~Lr~kLcdLYEND-~IFDKFec~~sgd~~~v~TGSYnn~F~ifd~~~~~~~~LeA 63 (107)
++|++||+.+.. +.++. .+.|+|+.. +.+..|+|...+.+.+..++..+.+-.
T Consensus 1 ~~t~~~~~~~~~----~~~~~~~~~~~y~~~-----~~lG~G~~g~V~~~~~~~~~~~~avK~ 54 (342)
T 2qr7_A 1 MQTVGVHSIVQQ----LHRNSIQFTDGYEVK-----EDIGVGSYSVCKRCIHKATNMEFAVKI 54 (342)
T ss_dssp ----------------------CHHHHEEEE-----EEEEECSSEEEEEEEETTTTEEEEEEE
T ss_pred CCccchhhHHHH----hcccccCccccEEEE-----EEEeeCCCEEEEEEEECCCCCEEEEEE
Confidence 357777776653 23333 566899987 689999999999998877666555543
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=22.86 E-value=1.4e+02 Score=24.29 Aligned_cols=28 Identities=11% Similarity=0.076 Sum_probs=21.0
Q ss_pred eeeEEcCCCCeEE----ecccCCeEEEeecCC
Q psy13887 28 FEVCWSGTDSAIM----TGSYNNFFRMFDRIN 55 (107)
Q Consensus 28 Fec~~sgd~~~v~----TGSYnn~F~ifd~~~ 55 (107)
..+.||+||++++ .+++.+.+.+++..+
T Consensus 237 ~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 237 VGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp EEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred EEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 4678999999984 455667888888654
No 213
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=21.90 E-value=82 Score=26.27 Aligned_cols=28 Identities=11% Similarity=-0.021 Sum_probs=21.4
Q ss_pred eeEEc-CCCCeEE-----ecccCCeEEEeecCCC
Q psy13887 29 EVCWS-GTDSAIM-----TGSYNNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~s-gd~~~v~-----TGSYnn~F~ifd~~~~ 56 (107)
..+|| |||+.|+ .|+-...++|++..++
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g 211 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDP 211 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCT
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCC
Confidence 46999 9999998 4554446888888765
No 214
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=21.83 E-value=59 Score=26.03 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=23.8
Q ss_pred eeEEcCCCCeEEeccc----------CCeEEEeecCCC
Q psy13887 29 EVCWSGTDSAIMTGSY----------NNFFRMFDRINK 56 (107)
Q Consensus 29 ec~~sgd~~~v~TGSY----------nn~F~ifd~~~~ 56 (107)
.+.+||||+++..+++ +|.+.++|..+.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 6889999999988885 678999998754
No 215
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=20.79 E-value=1.1e+02 Score=21.81 Aligned_cols=49 Identities=16% Similarity=0.191 Sum_probs=37.4
Q ss_pred HHHHHhhhhhhhccccccceeeEEcCCCCeEEecccCCeEEEeecCCCcceeEe
Q psy13887 9 EYLRSKLCSLYENDCIFDKFEVCWSGTDSAIMTGSYNNFFRMFDRINKRDATLE 62 (107)
Q Consensus 9 e~Lr~kLcdLYEND~IFDKFec~~sgd~~~v~TGSYnn~F~ifd~~~~~~~~Le 62 (107)
|-+..+|.....-....++|+.. ..+..|+|...+.+.+..++..+.+-
T Consensus 3 e~~~~~l~~~~~~~~~~~~y~~~-----~~lg~G~~g~V~~~~~~~~~~~vaiK 51 (297)
T 3fxz_A 3 EEILEKLRSIVSVGDPKKKYTRF-----EKIGQGASGTVYTAMDVATGQEVAIR 51 (297)
T ss_dssp HHHHHHHHHHSBSSCGGGTBCCC-----EEEEEETTEEEEEEEBTTTCCEEEEE
T ss_pred HHHHhhhhcccCcCChhhceeee-----eeeccCCCeEEEEEEECCCCcEEEEE
Confidence 44566777776667777888875 68999999999999987776666554
No 216
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=20.01 E-value=1.5e+02 Score=20.69 Aligned_cols=26 Identities=12% Similarity=0.186 Sum_probs=21.6
Q ss_pred eEEcCCCCeEEecccCCeEEEeecCC
Q psy13887 30 VCWSGTDSAIMTGSYNNFFRMFDRIN 55 (107)
Q Consensus 30 c~~sgd~~~v~TGSYnn~F~ifd~~~ 55 (107)
+++++||...++...++.+.+|+..+
T Consensus 238 i~~d~~G~l~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 238 CCIDSDDNLYVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp EEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred eEECCCCCEEEEEcCCCEEEEECCCC
Confidence 68999999888877788899998754
Done!