Diaphorina citri psyllid: psy13898

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-----

MTVPQGSYKTSSLNIQDDRSTGFLQDIEVTGDKDDSKCLHVTIQKTNAGPLTQAKFIFDDHIRCMAAKQRLNRGRTQARLAKMQQIAKLLDLPSSVQPCPSPPLYTLRGQINEWVTVANEYGLKFSAEKSEVVVLKCEEQVEGAIVMNGTTLKQVDHFKYLGSIISEDGTIDKEINRRIQQGSAL

ccccccccccccccCEEEEEEEEcEEEEEEcccccccEEEEEEEcccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEccccccEEcEEEccCECcCEEEEEEEcCECccccccHHHHHHHHHHcccc

*************NIQDDRSTGFLQDIEVTGDKDDSKCLHVTIQKTNAGPLTQAKFIFDDHIRCMAAKQRLNRGRTQARLAKMQQIAKLLDLPSSVQPCPSPPLYTLRGQINEWVTVANEYGLKFSAEKSEVVVLKCEEQVEGAIVMNGTTLKQVDHFKYLGSIISEDGTIDKEINRRIQQG***

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MTVPQGSYKTSSLNIQDDRSTGFLQDIEVTGDKDDSKCLHVTIQKTNAGPLTQAKFIFDDHIRCMAAKQRLNRGRTQARLAKMQQIAKLLDLPSSVQPCPSPPLYTLRGQINEWVTVANEYGLKFSAEKSEVVVLKCEEQVEGAIVMNGTTLKQVDHFKYLGSIISEDGTIDKEINRRIQQGSAL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Protein CLEC16A		confident	Q2KHT3
Uncharacterized protein gop-1		confident	P46578
Protein CLEC16A		confident	Q80U30

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005770 [CC]	late endosome	probable	GO:0005737, GO:0043231, GO:0043227, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0005768, GO:0043226
GO:0016021 [CC]	integral to membrane	probable	GO:0005575, GO:0044425, GO:0016020, GO:0031224

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3FSI, chain A
Confidence level:probable
Coverage over the Query: 48-134,156-169
View the alignment between query and template
View the model in PyMOL