RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13901
         (157 letters)



>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 338

 Score = 58.6 bits (141), Expect = 2e-11
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 7/64 (10%)

Query: 93  DPAGVRFGHLPPHEKLTADDARFVMVVHSSGDILS------FSQPIGDADFYPNGGNAPQ 146
           DPA   F  LP   +L   DA FV V+H+    +        SQ +G  DF+PNGG    
Sbjct: 178 DPAEPCFQGLPEEVRLDPSDAMFVDVIHTDSAPIIPYLGFGMSQKVGHLDFFPNGG-KEM 236

Query: 147 PKCS 150
           P C 
Sbjct: 237 PGCQ 240



 Score = 55.5 bits (133), Expect = 2e-10
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 25  GGNTPQPKSLDPAGVRFGHLPPHEKLTADDARFVMVVHSSGDILS------FSQPIGDAD 78
            G+  +   LDPA   F  LP   +L   DA FV V+H+    +        SQ +G  D
Sbjct: 168 EGHVGRITGLDPAEPCFQGLPEEVRLDPSDAMFVDVIHTDSAPIIPYLGFGMSQKVGHLD 227

Query: 79  FYPNGGNAPQP 89
           F+PNGG    P
Sbjct: 228 FFPNGG-KEMP 237



 Score = 35.9 bits (82), Expect = 0.001
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 7/36 (19%)

Query: 2   VVHSSGDILS------FSQPIGDADFYPNGGNTPQP 31
           V+H+    +        SQ +G  DF+PNGG    P
Sbjct: 203 VIHTDSAPIIPYLGFGMSQKVGHLDFFPNGG-KEMP 237


>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
           {Dog (Canis familiaris) [TaxId: 9615]}
          Length = 337

 Score = 55.6 bits (133), Expect = 2e-10
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 7/64 (10%)

Query: 93  DPAGVRFGHLPPHEKLTADDARFVMVVHSSGDILS------FSQPIGDADFYPNGGNAPQ 146
           DP    F   P   +L   DA FV V+H+    L        SQ +G  DF+PNGG    
Sbjct: 177 DPVEASFQGTPEEVRLDPTDADFVDVIHTDAAPLIPFLGFGTSQQMGHLDFFPNGG-EEM 235

Query: 147 PKCS 150
           P C 
Sbjct: 236 PGCK 239



 Score = 52.5 bits (125), Expect = 2e-09
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 7/61 (11%)

Query: 35  DPAGVRFGHLPPHEKLTADDARFVMVVHSSGDILS------FSQPIGDADFYPNGGNAPQ 88
           DP    F   P   +L   DA FV V+H+    L        SQ +G  DF+PNGG    
Sbjct: 177 DPVEASFQGTPEEVRLDPTDADFVDVIHTDAAPLIPFLGFGTSQQMGHLDFFPNGG-EEM 235

Query: 89  P 89
           P
Sbjct: 236 P 236



 Score = 32.4 bits (73), Expect = 0.018
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 7/36 (19%)

Query: 2   VVHSSGDILS------FSQPIGDADFYPNGGNTPQP 31
           V+H+    L        SQ +G  DF+PNGG    P
Sbjct: 202 VIHTDAAPLIPFLGFGTSQQMGHLDFFPNGG-EEMP 236


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.139    0.432 

Gapped
Lambda     K      H
   0.267   0.0501    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 626,903
Number of extensions: 28372
Number of successful extensions: 58
Number of sequences better than 10.0: 1
Number of HSP's gapped: 54
Number of HSP's successfully gapped: 9
Length of query: 157
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 79
Effective length of database: 1,336,656
Effective search space: 105595824
Effective search space used: 105595824
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.2 bits)