BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13905
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D1E6|TBCB_MOUSE Tubulin-folding cofactor B OS=Mus musculus GN=Tbcb PE=1 SV=2
Length = 244
Score = 144 bits (362), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 123/229 (53%), Gaps = 10/229 (4%)
Query: 16 TVELYITNSKDKHESCLNLKKLKLNNTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSH 75
TV ++I++S + S K+ + TI E K KLEL+ G +S M + LY + S
Sbjct: 10 TVMVFISSSLNSFRS---EKRYSRSLTIAEFKCKLELVVGSPASCMELELYGADDKFYSK 66
Query: 76 LSDNSMLLGQYPVENEMTLFV---EGNYLTDGLESSET-KYVLPEEKYKEHKENLKNFMM 131
L LLG YPV++ + V G L + + S+ KY + E Y+ + +++FM
Sbjct: 67 LDQEDALLGSYPVDDGCRIHVIDHSGVRLGEYEDVSKVEKYEISPEAYERRQNTVRSFMK 126
Query: 132 KQKEERLRREALLKENNEEKDKCLEENI-LKDIEVGKRCKIN--DSDVRFGTVMFVGETK 188
+ K E ++ E + EE I VG RC++ D +R GTVM+VG T
Sbjct: 127 RSKLGPYNEELRAQQEAEAAQRLSEEKAQASAISVGSRCEVRAPDHSLRRGTVMYVGLTD 186
Query: 189 FSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFP 237
F G WVGV+ DEP GKN+G+V +YFEC+ YG FVKP +T+GDFP
Sbjct: 187 FKPGYWVGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSAVTVGDFP 235
>sp|Q99426|TBCB_HUMAN Tubulin-folding cofactor B OS=Homo sapiens GN=TBCB PE=1 SV=2
Length = 244
Score = 140 bits (353), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 124/229 (54%), Gaps = 10/229 (4%)
Query: 16 TVELYITNSKDKHESCLNLKKLKLNNTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSH 75
TV ++I++S + S K+ + TI E K KLELL G +S M + LY + S
Sbjct: 10 TVTVFISSSLNTFRS---EKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSK 66
Query: 76 LSDNSMLLGQYPVENEMTLFV---EGNYLTDGLESSET-KYVLPEEKYKEHKENLKNFMM 131
L LLG YPV++ + V G L + + S KY + +E Y + ++ +++F+
Sbjct: 67 LDQEDALLGSYPVDDGCRIHVIDHSGARLGEYEDVSRVEKYTISQEAYDQRQDTVRSFLK 126
Query: 132 KQKEERLRREALLKENNEEKDKCLEENI-LKDIEVGKRCKINDS--DVRFGTVMFVGETK 188
+ K R E ++ E + EE I VG RC++ + R GTVM+VG T
Sbjct: 127 RSKLGRYNEEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTD 186
Query: 189 FSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFP 237
F G W+GV+ DEP GKN+G+V +YFEC+ YG FVKP +T+GDFP
Sbjct: 187 FKPGYWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPAVVTVGDFP 235
>sp|Q5E951|TBCB_BOVIN Tubulin-folding cofactor B OS=Bos taurus GN=TBCB PE=2 SV=1
Length = 244
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 127/229 (55%), Gaps = 10/229 (4%)
Query: 16 TVELYITNSKDKHESCLNLKKLKLNNTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSH 75
TV ++I++S + S K+ + T+ E K KL+L+ G +S M + LY +
Sbjct: 10 TVNVFISSSLNSFRS---QKRYSRSLTVAEFKCKLQLVVGSPASCMELELYGPDDKFCCK 66
Query: 76 LSDNSMLLGQYPVENEMTLFV---EGNYLTDGLESSET-KYVLPEEKYKEHKENLKNFMM 131
L + LLG YPV++ + V G L + + S+ KY + +E Y++ ++++++F+
Sbjct: 67 LDQDDALLGSYPVDDGCRIHVIDHSGARLGEYEDISKVEKYEISQEAYEQRQDSIRSFLK 126
Query: 132 KQKEERLRREALLKENNEEKDKCLEENI-LKDIEVGKRCKINDS--DVRFGTVMFVGETK 188
+ K R E ++ E + +EE I VG RC++ R GTVM+VG T
Sbjct: 127 RNKLGRFNEEERAQQEAENSQRLIEEEAQASTIPVGSRCEVRTPGQPPRRGTVMYVGLTD 186
Query: 189 FSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFP 237
F G W+G++ DEP GKN+G+V +YFEC+ YG FVKP +T+GDFP
Sbjct: 187 FKPGYWIGIRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSVVTVGDFP 235
>sp|Q20728|TBCB_CAEEL Tubulin-specific chaperone B OS=Caenorhabditis elegans GN=F53F4.3
PE=1 SV=1
Length = 229
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 14/219 (6%)
Query: 35 KKLKLNNTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSHLSDNSMLLGQYPVENEMTL 94
KK ++ +LK+KLEL+ G +M I L++ + L L+D + L V + +
Sbjct: 20 KKYPAGMSLNDLKKKLELVVGTTVDSMRIQLFDGDDQLKGELTDGAKSLKDLGVRDGYRI 79
Query: 95 F---VEGNYLTDGLESSETKYVLPEEKYKEHKENLKNFMMKQKEERLRREALLKENNEEK 151
V G ES KY + ++ Y + ++++ + K +EE+ A EN +K
Sbjct: 80 HAVDVTGGNEDFKDESMVEKYEMSDDTYGKRTDSVRAWKKKMQEEQ--GSAAPMENESDK 137
Query: 152 DKCLEENILKDIEVGKRCKINDSD--VRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGT 209
L E K+I VG RC++ R G V +VG TKF GVWVGVK DEP GKN+G+
Sbjct: 138 ---LNEEAAKNIMVGNRCEVTVGAQMARRGEVAYVGATKFKEGVWVGVKYDEPVGKNDGS 194
Query: 210 VKDVKYFECEENYGMFVKPGRLTIGDFPVLDPFDELDEI 248
V V+YF+C+ YG FV+P + +GDFP L +DEI
Sbjct: 195 VAGVRYFDCDPKYGGFVRPVDVKVGDFPEL----SIDEI 229
>sp|Q54Z01|TBCB_DICDI Tubulin-specific chaperone B OS=Dictyostelium discoideum GN=tbcb
PE=3 SV=1
Length = 270
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 117/240 (48%), Gaps = 20/240 (8%)
Query: 15 GTVELYITNSKDKHES--CLNLKKLKLNNTIGELKQKLELLTGQMSSNMTISLYNRN--H 70
G V L IT+S ES N K L+ I + K+KL G M + L + N +
Sbjct: 30 GNVRLEITHSVLTGESLGTNNFKNFSLDLKIKDFKEKLYRFVGTEPKYMELILRDENKVN 89
Query: 71 DLVSHLSDNSMLLGQYPVENEMTLFV---EGNYLTDGLE--SSETKYVLPEEKYKEHKEN 125
D+ D+ LG Y ++ M + + + N L+ S K V+ EE Y + +
Sbjct: 90 DICKIDDDDDKTLGSYEPKDGMNVHIIDKDPNNFVSELQDISKAPKPVISEEDYNKREGT 149
Query: 126 LKNFMMKQKEERLRREALLKENNEEKDKCLEENILK---DIEVGKRCKI-----NDSDVR 177
K + ++E +L++E N +I+VG RCK+ + D R
Sbjct: 150 YKKW---KEENQLKKENDTTATTVTATTTTTNNATDTEIEIKVGDRCKVISDDPTNYDER 206
Query: 178 FGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFP 237
G V +VG +FSSGVW+GV+LD P GKN+G+VK +YF+C YG F KP + +GD+P
Sbjct: 207 LGKVQYVGTVEFSSGVWIGVELDLPLGKNDGSVKGKQYFQCSPKYGCFAKPKNVLVGDYP 266
>sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1 OS=Mus musculus GN=Clip1
PE=1 SV=1
Length = 1391
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 156 EENILKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKY 215
+E + D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+Y
Sbjct: 51 QEEFVDDFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRY 108
Query: 216 FECEENYGMFVKPGRLT 232
F+CE G+F +P +LT
Sbjct: 109 FQCEPLKGIFTRPSKLT 125
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
++++VG R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 209 RELKVGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 266
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 267 KYGLFAPVHKVTKIGFPSTTP 287
>sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1
PE=1 SV=2
Length = 1438
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 156 EENILKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKY 215
+E + D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+Y
Sbjct: 51 QEEFVDDFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRY 108
Query: 216 FECEENYGMFVKPGRLT 232
F+CE G+F +P +LT
Sbjct: 109 FQCEPLKGIFTRPSKLT 125
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+++++G R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 210 RELKIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 267
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 268 KYGLFAPVHKVTKIGFPSTTP 288
>sp|O42184|CLIP1_CHICK CAP-Gly domain-containing linker protein 1 OS=Gallus gallus
GN=CLIP1 PE=2 SV=1
Length = 1433
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN 221
D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+YF+CE
Sbjct: 58 DFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPL 115
Query: 222 YGMFVKPGRLT 232
G+F +P +L+
Sbjct: 116 RGIFTRPSKLS 126
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+++++G R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 213 RELKIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 270
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 271 RYGLFAPVHKVTKIGFPSTTP 291
>sp|P13496|DCTN1_DROME Dynactin subunit 1 OS=Drosophila melanogaster GN=Gl PE=1 SV=2
Length = 1265
Score = 78.6 bits (192), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
K+++VG R ++ D+ GTV +VG T F+ G WVGV LDEP GKN+G++K +YF+C+E
Sbjct: 4 KNLKVGARVELTGKDL-LGTVAYVGMTSFAVGKWVGVVLDEPKGKNSGSIKGQQYFQCDE 62
Query: 221 NYGMFVKPGRLTI 233
N GMFV+P +L +
Sbjct: 63 NCGMFVRPTQLRL 75
>sp|Q01397|DYNA_NEUCR Dynactin, 150 kDa isoform OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ro-3
PE=3 SV=3
Length = 1367
Score = 76.6 bits (187), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+ VG++ ++ D R V +VGET F+ G WVG++LDEP GKN+G+V+ +YF CE Y
Sbjct: 6 VAVGQKIELADGSGRTAFVRYVGETAFAPGTWVGIELDEPSGKNDGSVQGERYFNCEMGY 65
Query: 223 GMFVKPGRLTI 233
GMFV+P +
Sbjct: 66 GMFVRPTTFNV 76
>sp|Q8N3C7|CLIP4_HUMAN CAP-Gly domain-containing linker protein 4 OS=Homo sapiens GN=CLIP4
PE=1 SV=1
Length = 705
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 177 RFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDF 236
R GT+ F G T F+ G W G++L++P GKN+G+V V+YF C YG+F P R+
Sbjct: 497 RLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQR--- 553
Query: 237 PVLDPFDELDEI 248
V D D L EI
Sbjct: 554 -VTDSLDTLSEI 564
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+++G R I V GT+ F G T+F+SG W G++LDEP GKNNG+V V+YF+C Y
Sbjct: 283 LKLGDRVVIAGQKV--GTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKY 340
Query: 223 GMFV 226
G+F
Sbjct: 341 GIFA 344
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 41/54 (75%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLT 232
GTV +VG T F+SG+W+G++L GKN+G+V D +YF C+ N+G+ V+P R+T
Sbjct: 638 GTVRYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHGVLVRPSRVT 691
>sp|Q10235|ALP11_SCHPO Cell polarity protein alp11 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=alp11 PE=1 SV=1
Length = 234
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 113/235 (48%), Gaps = 20/235 (8%)
Query: 17 VELYITNSKDKHESCLNLKKLKLNNTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSHL 76
+ L+I +S E +N + T+ +LK KL + G ++ + + H+
Sbjct: 4 ITLFIKSSSANAERRINPQW-----TVSQLKTKLVPIVGTPEQYQKLTYEPASSTVPGHV 58
Query: 77 ---SDNSMLLGQYPVENEMTLFVEGNYLT------DGLESSETKYVLPEEKYKEHKENLK 127
+ ++ LG++ ++ T+ VE D L S KYV+P E+Y+ +++
Sbjct: 59 FTSEEENLDLGEFKLQPLGTIVVEDTRPPHLRLDFDDL-SQVDKYVMPREQYENRTDSV- 116
Query: 128 NFMMKQKEERLRREALLKENNEEKDKCLEENILKDIEVGKRCKINDSDVRFGTVMFVGET 187
+ K++ + R + + + + L+ ++ D++ + + R+GT+ ++G
Sbjct: 117 -YAWKKRNQLGRFNPDFEASKASRQESLKRELV-DLQKNLNSRCCAAGERYGTIRYIGLV 174
Query: 188 K--FSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPVLD 240
+ +WVGV+ DEP GKN+GTV +YF + +G F++ + +GDFP D
Sbjct: 175 PEINNDNLWVGVEFDEPVGKNDGTVSGKRYFNAKNKHGSFLRSSEVEVGDFPPED 229
>sp|Q8CI96|CLIP4_MOUSE CAP-Gly domain-containing linker protein 4 OS=Mus musculus GN=Clip4
PE=1 SV=1
Length = 704
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 177 RFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDF 236
R GT+ F G T F+ G W G++L++P GKN+G+V V+YF C YG+F P R+
Sbjct: 496 RVGTIKFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQR--- 552
Query: 237 PVLDPFDELDEI 248
+ D D L EI
Sbjct: 553 -LSDSLDTLSEI 563
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 141 EALLKENNEEKDKCLEENILKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLD 200
+A+L ++ + + ++ +++G R I V GT+ F G T+F+SG W G++LD
Sbjct: 263 KAVLPNSDHTTSRAMLTSL--GLKLGDRVVIAGQKV--GTLRFCGTTEFASGQWAGIELD 318
Query: 201 EPFGKNNGTVKDVKYFECEENYGMFV 226
EP GKNNG+V V+YF+C YG+F
Sbjct: 319 EPEGKNNGSVGRVQYFKCAPKYGIFA 344
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLT 232
TV +VG T F+SG+W+G++L GKN+G V D +YF C+ NYG+ V+P R+T
Sbjct: 637 ATVRYVGPTDFASGIWLGLELRSAKGKNDGAVGDKRYFTCKPNYGVLVRPSRVT 690
>sp|Q66HD5|CLIP4_RAT CAP-Gly domain-containing linker protein 4 OS=Rattus norvegicus
GN=Clip4 PE=2 SV=1
Length = 599
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 177 RFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDF 236
R GT+ F G T F+ G W G++L++P GKN+G+V V+YF C YG+F P R+
Sbjct: 497 RVGTIKFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQR--- 553
Query: 237 PVLDPFDELDEI 248
+ D D L EI
Sbjct: 554 -LSDSLDTLSEI 564
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+++G R I V GT+ F G T+F+SG W G++LDEP GKNNG+V V+YF+C Y
Sbjct: 283 LKLGDRVVIAGQKV--GTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGRVQYFKCAPKY 340
Query: 223 GMFVKPGRLT 232
G+F ++T
Sbjct: 341 GIFAPLSKIT 350
>sp|Q9Z0H8|CLIP2_MOUSE CAP-Gly domain-containing linker protein 2 OS=Mus musculus GN=Clip2
PE=1 SV=2
Length = 1047
Score = 71.2 bits (173), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 157 ENILKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYF 216
++ L D VG+R +N V+ G V ++GET+F+ G W GV LD+P GKN+G V V+YF
Sbjct: 74 DDFLGDFVVGERVWVNG--VKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYF 131
Query: 217 ECEENYGMFVKPGRLT 232
EC G+F +P +LT
Sbjct: 132 ECPALQGIFTRPSKLT 147
Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
KD+ +G R + + + G V +VGET F+ G W GV+LDEP GKN+G V +YF+C
Sbjct: 218 KDLHLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 275
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
+G+F ++ FP P
Sbjct: 276 KFGLFAPIHKVIRIGFPSTSP 296
>sp|Q9UDT6|CLIP2_HUMAN CAP-Gly domain-containing linker protein 2 OS=Homo sapiens GN=CLIP2
PE=1 SV=1
Length = 1046
Score = 70.5 bits (171), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 157 ENILKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYF 216
++ L D VG+R +N V+ G V ++GET+F+ G W GV LD+P GKN+G V V+YF
Sbjct: 73 DDFLGDFVVGERVWVNG--VKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYF 130
Query: 217 ECEENYGMFVKPGRLT 232
EC G+F +P +LT
Sbjct: 131 ECPALQGIFTRPSKLT 146
Score = 66.2 bits (160), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
KD+ +G R + + + G V +VGET F+ G W GV+LDEP GKN+G V +YF+C
Sbjct: 217 KDLRLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 274
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
+G+F ++ FP P
Sbjct: 275 KFGLFAPIHKVIRIGFPSTSP 295
>sp|O55156|CLIP2_RAT CAP-Gly domain-containing linker protein 2 OS=Rattus norvegicus
GN=Clip2 PE=1 SV=1
Length = 1046
Score = 70.5 bits (171), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 157 ENILKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYF 216
++ L D VG+R +N V+ G V ++GET+F+ G W GV LD+P GKN+G V ++YF
Sbjct: 74 DDFLGDFVVGERVWVNG--VKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGLRYF 131
Query: 217 ECEENYGMFVKPGRLT 232
EC G+F +P +LT
Sbjct: 132 ECPALQGIFTRPSKLT 147
Score = 67.0 bits (162), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
KD+ +G R + + + G V +VGET F+ G W GV+LDEP GKN+G V +YF+C
Sbjct: 218 KDLHLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 275
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
+G+F ++ FP P
Sbjct: 276 KFGLFAPIHKVIRIGFPSTSP 296
>sp|Q6PCJ1|DCTN1_XENLA Dynactin subunit 1 OS=Xenopus laevis GN=dctn1 PE=2 SV=1
Length = 1232
Score = 68.2 bits (165), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
K ++VG R ++ R GTV +VG T F++G WVGV LD+ GKN+GTV+ +YF CEE
Sbjct: 8 KPLKVGSRVEVIGKGYR-GTVAYVGATLFATGKWVGVILDDSKGKNDGTVQGRRYFTCEE 66
Query: 221 NYGMFVKPGRLTI 233
N+G+FV+ ++ +
Sbjct: 67 NHGIFVRQSQIQV 79
>sp|P35458|DCTN1_CHICK Dynactin subunit 1 OS=Gallus gallus GN=DCTN1 PE=2 SV=2
Length = 1224
Score = 68.2 bits (165), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
K ++VG R ++ R GTV +VG T ++G WVGV LDE GKN+GTV+ KYF CEE
Sbjct: 26 KPLKVGSRVEVIGKGHR-GTVAYVGATLXATGKWVGVILDEAKGKNDGTVQGRKYFTCEE 84
Query: 221 NYGMFVKPGRLTI 233
N+G+FV+ ++ +
Sbjct: 85 NHGIFVRQSQIQV 97
>sp|O08788|DCTN1_MOUSE Dynactin subunit 1 OS=Mus musculus GN=Dctn1 PE=1 SV=3
Length = 1281
Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 25 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 83
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 84 GHGIFVRQSQIQV 96
>sp|Q14203|DCTN1_HUMAN Dynactin subunit 1 OS=Homo sapiens GN=DCTN1 PE=1 SV=3
Length = 1278
Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 25 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 83
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 84 GHGIFVRQSQIQV 96
>sp|P28023|DCTN1_RAT Dynactin subunit 1 OS=Rattus norvegicus GN=Dctn1 PE=2 SV=2
Length = 1280
Score = 66.2 bits (160), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 25 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 83
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 84 GHGIFVRQSQIQV 96
>sp|Q5VT06|CE350_HUMAN Centrosome-associated protein 350 OS=Homo sapiens GN=CEP350 PE=1 SV=1
Length = 3117
Score = 65.9 bits (159), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D +G R I +V+ G + F GET F+ G W GV+LD+P G NNGT + YFEC+
Sbjct: 2494 LFDFHIGDRVLI--GNVQPGILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIAYFECK 2551
Query: 220 ENYGMFVKPGRLT 232
E +G+F P +++
Sbjct: 2552 EKHGIFAPPQKIS 2564
>sp|Q9VJE5|CL190_DROME Restin homolog OS=Drosophila melanogaster GN=CLIP-190 PE=1 SV=1
Length = 1690
Score = 65.5 bits (158), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 44/57 (77%)
Query: 177 RFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTI 233
R G + ++GET+F+ G W GV+LDEP GKN+GTV D++YFEC+ YG+FV ++++
Sbjct: 252 RPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKPKYGVFVPIAKVSL 308
Score = 58.5 bits (140), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 177 RFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLT 232
R G + F+G+T F++G W GV LDEP GKN+G V +YF+CE G+F + RLT
Sbjct: 135 RPGQIAFIGDTHFAAGEWAGVVLDEPNGKNDGCVSGKRYFQCEPKRGIFSRLTRLT 190
>sp|Q5R686|CLIP3_PONAB CAP-Gly domain-containing linker protein 3 OS=Pongo abelii GN=CLIP3
PE=2 SV=1
Length = 547
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFV 226
GT+ F G T+F+SG WVGV+LDEP GKN+G+V V+YF C G+F
Sbjct: 308 GTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 355
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRL 231
G V F G+T F+ G W G++LD+P GK++G+V V+YF C +G+F R+
Sbjct: 430 GIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFAPASRI 482
>sp|Q96DZ5|CLIP3_HUMAN CAP-Gly domain-containing linker protein 3 OS=Homo sapiens GN=CLIP3
PE=1 SV=3
Length = 547
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFV 226
GT+ F G T+F+SG WVGV+LDEP GKN+G+V V+YF C G+F
Sbjct: 308 GTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 355
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRL 231
G V F G+T F+ G W G++LD+P GK++G+V V+YF C +G+F R+
Sbjct: 430 GIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFAPASRI 482
>sp|B9EHT4|CLIP3_MOUSE CAP-Gly domain-containing linker protein 3 OS=Mus musculus GN=Clip3
PE=1 SV=1
Length = 547
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFV 226
GT+ F G T+F+SG WVGV+LDEP GKN+G+V V+YF C G+F
Sbjct: 308 GTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 355
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRL 231
G V F G+T F+ G W G++LD+P GK++G+V V+YF C +G+F R+
Sbjct: 430 GIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCAPRHGVFAPASRI 482
>sp|Q5U243|CLIP3_XENLA CAP-Gly domain-containing linker protein 3 OS=Xenopus laevis
GN=clip3 PE=2 SV=1
Length = 534
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 177 RFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLT 232
+ GT+ F G T+F+SG WVGV+LDEP GKN+G+V ++YF C G+F +++
Sbjct: 296 KAGTLRFCGTTEFASGQWVGVELDEPDGKNDGSVGGIRYFICPPKQGIFAPVSKIS 351
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
IE+G + + + + G V F G+T F+ G W G++L++P GK++G+V V+YF C
Sbjct: 403 IEIGDQVLV--AGQKQGIVRFYGKTDFAPGYWFGIELEKPTGKHDGSVFGVRYFTCSAKN 460
Query: 223 GMFVKPGRL 231
G+F P R+
Sbjct: 461 GVFAPPSRV 469
>sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1
Length = 1826
Score = 63.5 bits (153), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPV 238
G V +VG F G WVGV+LD P GKN+G++ +YF C YG+ V+P R+ PV
Sbjct: 1715 GVVRYVGPADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGLLVRPSRVRRATGPV 1774
>sp|O42667|SSM4_SCHPO Microtubule-associated protein ssm4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssm4 PE=1 SV=1
Length = 670
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 178 FGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFP 237
G V F G T F SG+W+GV+L GKN+G+VK +YF CE+ G+FV+ + P
Sbjct: 16 LGIVRFAGSTDFESGIWLGVELLNGKGKNDGSVKGKRYFSCEKGKGIFVRACSSNVMKRP 75
>sp|P33420|NIP80_YEAST Protein NIP100 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=NIP100 PE=1 SV=2
Length = 868
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN--------YGMFVKPGR 230
G V F+GET+F+ G+W G++LD+P GKN+G+ ++YF+ + YG+F K
Sbjct: 28 GRVKFIGETQFAKGIWYGIELDKPLGKNDGSANGIRYFDIDLKKANSNGGYYGLFCKKDT 87
Query: 231 L 231
L
Sbjct: 88 L 88
>sp|Q5U378|TBCE_DANRE Tubulin-specific chaperone E OS=Danio rerio GN=tbce PE=2 SV=2
Length = 521
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 159 ILKDIEVGKR-CKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEP-FGKNNGTVKDVKYF 216
++ D VG+R C D GTV +VG ++GVW+GV+ D P GK++G+ V+YF
Sbjct: 1 MMLDEAVGRRVC----CDGERGTVRYVGPVPPTAGVWLGVEWDHPERGKHDGSHDGVRYF 56
Query: 217 ECEENY-GMFVKPGRLTIG 234
C G FV+P + + G
Sbjct: 57 TCRHPTGGSFVRPQKASFG 75
>sp|Q8CIV8|TBCE_MOUSE Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1
Length = 524
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 165 VGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEP-FGKNNGTVKDVKYFECEENY- 222
+G+R ++N + TV F G +G+W+GV+ D P GK++G+ + YF+C
Sbjct: 10 IGRRVEVNG---EYATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTG 66
Query: 223 GMFVKPGRLTIGD 235
G FV+P ++ GD
Sbjct: 67 GSFVRPSKVNFGD 79
>sp|Q5FVQ9|TBCE_RAT Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1
Length = 524
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 165 VGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEP-FGKNNGTVKDVKYFECEENY- 222
+G+R ++N + TV F G +G+W+GV+ D P GK++G+ + YF+C
Sbjct: 10 IGRRVEVNG---EYATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTG 66
Query: 223 GMFVKPGRLTIGD 235
G FV+P + G+
Sbjct: 67 GSFVRPNIVNFGE 79
>sp|Q55CN0|TBCE_DICDI Tubulin-specific chaperone E OS=Dictyostelium discoideum GN=tbce
PE=3 SV=1
Length = 525
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 156 EENILKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEP-FGKNNGTVKDVK 214
E++I++ +G+R K +D V GT+ + G+ G W G++ D+P GK+ GTVK +
Sbjct: 6 EKSIVEYFYIGERVKGDDGSV--GTIRYQGKVDGFEGNWYGIEWDDPKRGKHQGTVKGKQ 63
Query: 215 YFEC-EENYGMFVKPGRLTIGD 235
YF+C + G F+K +L G+
Sbjct: 64 YFKCINKGSGSFMKYEKLIKGE 85
>sp|Q32KS0|TBCE_BOVIN Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1
Length = 528
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 165 VGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEP-FGKNNGTVKDVKYFECEE-NY 222
+G+R ++N TV F G +G+W+GV+ D P GK++G+ + YF+C
Sbjct: 10 IGRRVEVNG---EHATVRFSGLVPPVAGLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTA 66
Query: 223 GMFVKPGRLTIG-DF 236
G F++P ++ G DF
Sbjct: 67 GSFIRPHKVNFGVDF 81
>sp|Q5RBD9|TBCE_PONAB Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1
Length = 527
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 165 VGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEP-FGKNNGTVKDVKYFECEENY- 222
+G+R ++N TV F G +G W+GV+ D P GK++G+ + YF+C
Sbjct: 10 IGQRVEVNG---EHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFQCRHPTG 66
Query: 223 GMFVKPGRLTIG-DF 236
G F++P ++ G DF
Sbjct: 67 GSFIRPNKVNFGTDF 81
>sp|Q15813|TBCE_HUMAN Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1
Length = 527
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 165 VGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEP-FGKNNGTVKDVKYFECEENY- 222
+G+R ++N TV F G +G W+GV+ D P GK++G+ + YF+C
Sbjct: 10 IGRRVEVNG---EHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
Query: 223 GMFVKPGRLTIG-DF 236
G F++P ++ G DF
Sbjct: 67 GSFIRPNKVNFGTDF 81
>sp|Q5U508|TBCE_XENLA Tubulin-specific chaperone E OS=Xenopus laevis GN=tbce PE=2 SV=1
Length = 522
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 169 CKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPF-GKNNGTVKDVKYFECEENY-GMFV 226
C+ D + TV +VG + G+W+GV+ D GK+NGT + KYF C G F+
Sbjct: 11 CRRIICDGEYATVRYVGNVPPTPGLWLGVEWDNHLRGKHNGTHEGTKYFTCSHPTGGSFI 70
Query: 227 KPGRLTIG-DF 236
+ + G DF
Sbjct: 71 RLKKANFGVDF 81
>sp|P53904|TBCB_YEAST Tubulin-specific chaperone B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ALF1 PE=1 SV=1
Length = 254
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 16/145 (11%)
Query: 99 NYLTDGLESSETKYVLPEEKYKEHKENLKNFMMKQ------KEERLRREALLKENNEEKD 152
N L E + V+ EE Y +++ + M ++ +R AL K++
Sbjct: 93 NQLATQAEGIPSMEVISEEDYLRRDQSVLRWKMAHGYGRFNAAQQSQRAALAKQDEAYAR 152
Query: 153 KCLEENILKDIEVGKRCKI--NDSDVRFGTVMFVGETKFSS-GVWVGVKLDEPFGKNNGT 209
+ L I G+ C++ + S R + +VG G W GV+ E GKN+G
Sbjct: 153 EQLTAAI------GRHCRVTVDGSAPREAILRYVGPLPLDVMGTWCGVEFPEAAGKNDGR 206
Query: 210 VKDVKYF-ECEENYGMFVKPGRLTI 233
+ V F +G FV+P + I
Sbjct: 207 INGVTLFGPVAPGHGSFVRPRAVEI 231
>sp|P34531|YM92_CAEEL Uncharacterized protein M01A8.2 OS=Caenorhabditis elegans
GN=M01A8.2 PE=4 SV=4
Length = 937
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTI 233
G + +VG G++ G++L EP GK++GT + V YF +G+F R+T+
Sbjct: 33 GFLRYVGPIHGKDGMFCGIELLEPNGKHDGTFQGVSYFIATPYHGIFAPIFRVTL 87
>sp|Q80TQ2|CYLD_MOUSE Ubiquitin carboxyl-terminal hydrolase CYLD OS=Mus musculus GN=Cyld
PE=1 SV=2
Length = 952
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKL-DEPFGKNNGTVKDVKYFECEEN 221
+EVG ++ ++ +G + ++G+ S V G++L DE G +GT + +YF C
Sbjct: 466 LEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGCTDGTFRGTRYFTCALK 525
Query: 222 YGMFVK 227
+FVK
Sbjct: 526 KALFVK 531
>sp|Q66H62|CYLD_RAT Ubiquitin carboxyl-terminal hydrolase CYLD OS=Rattus norvegicus
GN=Cyld PE=2 SV=1
Length = 953
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKL-DEPFGKNNGTVKDVKYFECEEN 221
+EVG ++ ++ +G + ++G+ S V G++L DE G +GT + +YF C
Sbjct: 467 LEVGSLAEVKENPPFYGVIRWIGQPPGLSDVLAGLELEDECAGCTDGTFRGTRYFTCALK 526
Query: 222 YGMFVK 227
+FVK
Sbjct: 527 KALFVK 532
>sp|Q5RED8|CYLD_PONAB Ubiquitin carboxyl-terminal hydrolase CYLD OS=Pongo abelii GN=CYLD
PE=2 SV=1
Length = 956
Score = 38.5 bits (88), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKL-DEPFGKNNGTVKDVKYFECEEN 221
+EVG ++ ++ +G + ++G+ + V G++L DE G +GT + +YF C
Sbjct: 470 LEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALK 529
Query: 222 YGMFVK 227
+FVK
Sbjct: 530 KALFVK 535
>sp|Q9NQC7|CYLD_HUMAN Ubiquitin carboxyl-terminal hydrolase CYLD OS=Homo sapiens GN=CYLD
PE=1 SV=1
Length = 956
Score = 38.5 bits (88), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKL-DEPFGKNNGTVKDVKYFECEEN 221
+EVG ++ ++ +G + ++G+ + V G++L DE G +GT + +YF C
Sbjct: 470 LEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALK 529
Query: 222 YGMFVK 227
+FVK
Sbjct: 530 KALFVK 535
>sp|Q1RMU2|CYLD_BOVIN Ubiquitin carboxyl-terminal hydrolase CYLD OS=Bos taurus GN=CYLD
PE=2 SV=1
Length = 953
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKL-DEPFGKNNGTVKDVKYFECEEN 221
+EVG ++ ++ +G + ++G+ + V G++L DE G +GT + +YF C
Sbjct: 467 LEVGSLAEVKENPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALK 526
Query: 222 YGMFVK 227
+FVK
Sbjct: 527 KALFVK 532
>sp|P11709|BIK1_YEAST Nuclear fusion protein BIK1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BIK1 PE=1 SV=1
Length = 440
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 169 CKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE-ENYGMFVK 227
C I ++ G + +VG +G++ GV L GKN+G+ KYF+ E G+F++
Sbjct: 10 CFIQIPNLGRGQLKYVGPVDTKAGMFAGVDLLANIGKNDGSFMGKKYFQTEYPQSGLFIQ 69
>sp|P39937|PAC2_YEAST Protein PAC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PAC2 PE=1 SV=1
Length = 518
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKL------DEPFGKNNGTVKDVKYFE 217
E+G R KI F T+ F+G K W VK D GK++GT+ D+ YF+
Sbjct: 4 EIGDRLKIGG---YFCTIKFIGVIK----PWPSVKAYGVEWDDHSRGKHSGTIDDIHYFD 56
Query: 218 CE-ENYGMFVKPGRL 231
+ N G F+K ++
Sbjct: 57 VQIPNSGSFLKESKI 71
>sp|P79065|TIP1_SCHPO Tip elongation protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=tip1 PE=1 SV=1
Length = 461
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 179 GTVMFVGETKFSSGVWVGVKL---DEPFGKNNGTVKDVKYFECEEN--YGMFV 226
G V + GE + GV+VG++L FGKN G V +YF+ + N G+FV
Sbjct: 16 GFVRYAGEVENRKGVYVGLELLPEFAEFGKNRGVVDGREYFKTKNNEKTGIFV 68
>sp|Q4P5U1|JHD1_USTMA JmjC domain-containing histone demethylation protein 1 OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=JHD1 PE=3 SV=1
Length = 669
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 93 TLFVEGNYLTDGLESSETKYVLPEEKYK-------EHKENLKNFMMKQKEERLRREALLK 145
TL V GN+LTD +++ K V EE K H + L F+ K +RL A +
Sbjct: 470 TLVVGGNFLTDWNVATQWKLVEIEEATKVPRKFRFPHLKRLSWFVAKGWNDRLEPLAEFE 529
Query: 146 ENNEEKDKCLEEN--ILKDIEVG 166
+E+D+ LEE+ + ++VG
Sbjct: 530 TLTKEEDQVLEESAQVSAQVDVG 552
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,011,156
Number of Sequences: 539616
Number of extensions: 4449459
Number of successful extensions: 15554
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 14870
Number of HSP's gapped (non-prelim): 756
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)