Your job contains 1 sequence.
>psy13905
MLTQVEYMDIMDGGGTVELYITNSKDKHESCLNLKKLKLNNTIGELKQKLELLTGQMSSN
MTISLYNRNHDLVSHLSDNSMLLGQYPVENEMTLFVEGNYLTDGLESSETKYVLPEEKYK
EHKENLKNFMMKQKEERLRREALLKENNEEKDKCLEENILKDIEVGKRCKINDSDVRFGT
VMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPVLD
PFDELDEI
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13905
(248 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1913661 - symbol:Tbcb "tubulin folding cofactor B... 331 6.2e-30 1
UNIPROTKB|Q99426 - symbol:TBCB "Tubulin-folding cofactor ... 327 1.6e-29 1
ZFIN|ZDB-GENE-030131-9296 - symbol:tbcb "tubulin folding ... 322 5.6e-29 1
UNIPROTKB|Q5E951 - symbol:TBCB "Tubulin-folding cofactor ... 316 2.4e-28 1
RGD|1309965 - symbol:Tbcb "tubulin folding cofactor B" sp... 314 3.9e-28 1
UNIPROTKB|Q8HXL4 - symbol:CKAP1 "Uncharacterized protein"... 313 5.0e-28 1
FB|FBgn0034451 - symbol:TBCB "tubulin-binding cofactor B"... 177 7.1e-25 2
CGD|CAL0005089 - symbol:orf19.2828 species:5476 "Candida ... 233 3.9e-24 2
DICTYBASE|DDB_G0277983 - symbol:tbcB "tubulin folding cof... 270 1.8e-23 1
TAIR|locus:2076224 - symbol:EMB2804 "AT3G10220" species:3... 260 2.1e-22 1
ASPGD|ASPL0000026322 - symbol:AN5116 species:162425 "Emer... 171 9.1e-19 2
FB|FBgn0001108 - symbol:Gl "Glued" species:7227 "Drosophi... 203 6.7e-15 1
POMBASE|SPAC13D6.05 - symbol:alp11 "tubulin specific chap... 180 6.2e-14 1
FB|FBgn0019968 - symbol:Khc-73 "Kinesin-73" species:7227 ... 172 1.0e-13 2
WB|WBGene00001017 - symbol:dnc-1 species:6239 "Caenorhabd... 188 2.9e-13 1
UNIPROTKB|J9P0I9 - symbol:CLIP2 "Uncharacterized protein"... 184 3.2e-13 1
MGI|MGI:1919100 - symbol:Clip4 "CAP-GLY domain containing... 164 3.2e-13 2
UNIPROTKB|F1RJL6 - symbol:CLIP2 "Uncharacterized protein"... 183 5.2e-13 1
UNIPROTKB|C9JJD0 - symbol:DCTN1 "Dynactin subunit 1" spec... 171 5.6e-13 1
UNIPROTKB|C9JJN7 - symbol:DCTN1 "Dynactin subunit 1" spec... 171 5.6e-13 1
UNIPROTKB|E1BQI8 - symbol:CLIP2 "Uncharacterized protein"... 183 7.1e-13 1
RGD|67404 - symbol:Clip1 "CAP-GLY domain containing linke... 184 7.5e-13 1
UNIPROTKB|F1MAH8 - symbol:Clip1 "Protein Clip1" species:1... 184 7.5e-13 1
MGI|MGI:1928401 - symbol:Clip1 "CAP-GLY domain containing... 184 8.0e-13 1
UNIPROTKB|E2QWB0 - symbol:CLIP1 "Uncharacterized protein"... 184 8.3e-13 1
UNIPROTKB|E2QWD0 - symbol:CLIP1 "Uncharacterized protein"... 184 8.3e-13 1
UNIPROTKB|P30622 - symbol:CLIP1 "CAP-Gly domain-containin... 184 8.3e-13 1
UNIPROTKB|E1BGH3 - symbol:CLIP2 "Uncharacterized protein"... 181 1.2e-12 1
UNIPROTKB|E3W9A2 - symbol:CLIP1 "Uncharacterized protein"... 182 1.4e-12 1
UNIPROTKB|C9JTE5 - symbol:DCTN1 "Dynactin subunit 1" spec... 167 1.5e-12 1
UNIPROTKB|C9JZA4 - symbol:DCTN1 "Dynactin subunit 1" spec... 167 1.5e-12 1
UNIPROTKB|Q9UDT6 - symbol:CLIP2 "CAP-Gly domain-containin... 180 1.5e-12 1
MGI|MGI:1313136 - symbol:Clip2 "CAP-GLY domain containing... 180 1.5e-12 1
UNIPROTKB|O42184 - symbol:CLIP1 "CAP-Gly domain-containin... 180 2.2e-12 1
RGD|62019 - symbol:Clip2 "CAP-GLY domain containing linke... 177 3.1e-12 1
UNIPROTKB|P35458 - symbol:DCTN1 "Dynactin subunit 1" spec... 177 3.8e-12 1
ZFIN|ZDB-GENE-070117-2205 - symbol:dctn1a "dynactin 1a" s... 177 3.8e-12 1
ZFIN|ZDB-GENE-070521-1 - symbol:kif13ba "kinesin family m... 178 4.6e-12 1
UNIPROTKB|A8MVD5 - symbol:TBCB "Tubulin-folding cofactor ... 162 5.0e-12 1
DICTYBASE|DDB_G0280435 - symbol:dynA "dynactin 150 kDa su... 177 5.0e-12 1
FB|FBgn0036882 - symbol:CG9279 species:7227 "Drosophila m... 175 7.0e-12 1
FB|FBgn0020503 - symbol:CLIP-190 "Cytoplasmic linker prot... 175 9.2e-12 1
UNIPROTKB|Q5VT06 - symbol:CEP350 "Centrosome-associated p... 172 1.4e-11 2
UNIPROTKB|H0Y7F7 - symbol:CEP350 "Centrosome-associated p... 172 1.4e-11 1
UNIPROTKB|F1MIC9 - symbol:DCTN1 "Uncharacterized protein"... 171 1.7e-11 1
UNIPROTKB|D4A8U7 - symbol:Dctn1 "Dynactin subunit 1" spec... 171 1.7e-11 1
UNIPROTKB|Q14203 - symbol:DCTN1 "Dynactin subunit 1" spec... 171 1.8e-11 1
RGD|62038 - symbol:Dctn1 "dynactin 1" species:10116 "Ratt... 171 1.8e-11 1
MGI|MGI:107745 - symbol:Dctn1 "dynactin 1" species:10090 ... 171 1.8e-11 1
UNIPROTKB|F1SNT8 - symbol:DCTN1 "Uncharacterized protein"... 171 1.8e-11 1
UNIPROTKB|F1REW5 - symbol:CLIP1 "Uncharacterized protein"... 170 2.1e-11 1
UNIPROTKB|F1PIS8 - symbol:KIF13B "Uncharacterized protein... 160 4.4e-11 2
CGD|CAL0005838 - symbol:NIP100 species:5476 "Candida albi... 165 4.9e-11 1
UNIPROTKB|Q5A6R8 - symbol:NIP100 "Putative uncharacterize... 165 4.9e-11 1
UNIPROTKB|F1PIS5 - symbol:KIF13B "Uncharacterized protein... 160 5.6e-11 2
UNIPROTKB|E1BC48 - symbol:CEP350 "Uncharacterized protein... 164 7.3e-11 2
UNIPROTKB|F1RJP9 - symbol:KIF13B "Uncharacterized protein... 160 7.8e-11 2
UNIPROTKB|E1BGB0 - symbol:KIF13B "Uncharacterized protein... 160 8.0e-11 2
UNIPROTKB|G4NH27 - symbol:MGG_03960 "Dynactin ro-3" speci... 165 8.4e-11 1
ASPGD|ASPL0000000137 - symbol:nudM species:162425 "Emeric... 164 9.7e-11 1
UNIPROTKB|E2RBT3 - symbol:CEP350 "Uncharacterized protein... 157 3.8e-10 2
UNIPROTKB|Q96DZ5 - symbol:CLIP3 "CAP-Gly domain-containin... 153 4.4e-10 2
UNIPROTKB|Q5R686 - symbol:CLIP3 "CAP-Gly domain-containin... 153 4.4e-10 2
UNIPROTKB|D2HFU1 - symbol:PANDA_009788 "Putative uncharac... 155 4.9e-10 1
UNIPROTKB|F1LRB4 - symbol:Kif13b "Protein Kif13b" species... 157 7.9e-10 1
RGD|1303307 - symbol:Kif13b "kinesin family member 13B" s... 157 7.9e-10 1
UNIPROTKB|D4A996 - symbol:Kif13b "Protein Kif13b" species... 157 8.2e-10 1
UNIPROTKB|C9J1B7 - symbol:DCTN1 "Dynactin subunit 1" spec... 139 1.4e-09 1
UNIPROTKB|I3LGS7 - symbol:CLIP3 "Uncharacterized protein"... 154 1.5e-09 1
UNIPROTKB|E1BAL0 - symbol:CLIP3 "Uncharacterized protein"... 153 2.3e-09 1
MGI|MGI:1923936 - symbol:Clip3 "CAP-GLY domain containing... 152 3.5e-09 1
RGD|1306245 - symbol:Clip3 "CAP-GLY domain containing lin... 152 3.5e-09 1
UNIPROTKB|F5H270 - symbol:CLIP1 "CAP-Gly domain-containin... 135 3.6e-09 1
UNIPROTKB|F8VPJ2 - symbol:KIF13B "Kinesin-like protein KI... 152 1.0e-08 2
UNIPROTKB|Q9NQT8 - symbol:KIF13B "Kinesin-like protein KI... 152 1.0e-08 2
POMBASE|SPAC27D7.13c - symbol:ssm4 "dynactin microtubule-... 139 4.8e-07 1
SGD|S000006095 - symbol:NIP100 "Large subunit of the dyna... 135 2.2e-06 1
UNIPROTKB|F1NVX8 - symbol:TBCE "Uncharacterized protein" ... 128 8.3e-06 1
FB|FBgn0033055 - symbol:tbce "tubulin-specific chaperone ... 124 2.6e-05 1
MGI|MGI:1917680 - symbol:Tbce "tubulin-specific chaperone... 121 5.7e-05 1
ZFIN|ZDB-GENE-051030-120 - symbol:tbce "tubulin folding c... 119 9.9e-05 1
DICTYBASE|DDB_G0269990 - symbol:tbcE "tubulin binding cof... 120 0.00011 2
ASPGD|ASPL0000026995 - symbol:AN5531 species:162425 "Emer... 114 0.00048 1
RGD|1305533 - symbol:Tbce "tubulin folding cofactor E" sp... 113 0.00051 1
UNIPROTKB|F1RGX1 - symbol:TBCE "Uncharacterized protein" ... 90 0.00058 1
TAIR|locus:2825339 - symbol:PFI "AT1G71440" species:3702 ... 114 0.00062 2
>MGI|MGI:1913661 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR000938 MGI:MGI:1913661 Pfam:PF01302 GO:GO:0005634
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 eggNOG:COG5244
HOGENOM:HOG000209180 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AK002316 EMBL:AK003655
EMBL:AK010438 EMBL:BC010684 IPI:IPI00315948 RefSeq:NP_079824.2
UniGene:Mm.27947 PDB:1V6E PDB:1WHG PDBsum:1V6E PDBsum:1WHG
ProteinModelPortal:Q9D1E6 SMR:Q9D1E6 STRING:Q9D1E6
PhosphoSite:Q9D1E6 PaxDb:Q9D1E6 PRIDE:Q9D1E6
Ensembl:ENSMUST00000006254 GeneID:66411 KEGG:mmu:66411
UCSC:uc009gds.2 InParanoid:Q9D1E6 EvolutionaryTrace:Q9D1E6
NextBio:321613 Bgee:Q9D1E6 CleanEx:MM_TBCB Genevestigator:Q9D1E6
GermOnline:ENSMUSG00000006095 Uniprot:Q9D1E6
Length = 244
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 82/238 (34%), Positives = 116/238 (48%)
Query: 16 TVELYITNSKDKHESCXXXXXXXXXXTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSH 75
TV ++I++S + S TI E K KLEL+ G +S M + LY + S
Sbjct: 10 TVMVFISSSLNSFRS---EKRYSRSLTIAEFKCKLELVVGSPASCMELELYGADDKFYSK 66
Query: 76 LSDNSMLLGQYPVENEMTLFV---EGNYLTDGLESSET-KYVLPEEKYKEHKENLKNFMM 131
L LLG YPV++ + V G L + + S+ KY + E Y+ + +++FM
Sbjct: 67 LDQEDALLGSYPVDDGCRIHVIDHSGVRLGEYEDVSKVEKYEISPEAYERRQNTVRSFMK 126
Query: 132 KQXXXXXXXXXXXXXXXXXXXXXXXXXILKD-IEVGKRCKIN--DSDVRFGTVMFVGETK 188
+ I VG RC++ D +R GTVM+VG T
Sbjct: 127 RSKLGPYNEELRAQQEAEAAQRLSEEKAQASAISVGSRCEVRAPDHSLRRGTVMYVGLTD 186
Query: 189 FSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPVLD-PFDEL 245
F G WVGV+ DEP GKN+G+V +YFEC+ YG FVKP +T+GDFP D DE+
Sbjct: 187 FKPGYWVGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSAVTVGDFPEEDYGLDEM 244
>UNIPROTKB|Q99426 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9606 "Homo
sapiens" [GO:0005874 "microtubule" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=TAS] [GO:0051084 "'de novo'
posttranslational protein folding" evidence=TAS] [GO:0044267
"cellular protein metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_17015 InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 GO:GO:0015630
GO:GO:0051084 eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 EMBL:AD001527 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AF013488 EMBL:BT007424
EMBL:BC005969 EMBL:BC052812 EMBL:D49738 IPI:IPI00293126
RefSeq:NP_001272.2 UniGene:Hs.31053 ProteinModelPortal:Q99426
SMR:Q99426 IntAct:Q99426 MINT:MINT-2855745 STRING:Q99426
PhosphoSite:Q99426 DMDM:3023518 OGP:Q99426 PaxDb:Q99426
PeptideAtlas:Q99426 PRIDE:Q99426 DNASU:1155 Ensembl:ENST00000221855
GeneID:1155 KEGG:hsa:1155 UCSC:uc002odg.1 GeneCards:GC19P036605
HGNC:HGNC:1989 HPA:HPA041428 HPA:HPA041722 MIM:601303
neXtProt:NX_Q99426 PharmGKB:PA162405357 InParanoid:Q99426
PhylomeDB:Q99426 ChiTaRS:TBCB GenomeRNAi:1155 NextBio:4796
ArrayExpress:Q99426 Bgee:Q99426 CleanEx:HS_TBCB
Genevestigator:Q99426 GermOnline:ENSG00000105254 Uniprot:Q99426
Length = 244
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 82/240 (34%), Positives = 117/240 (48%)
Query: 16 TVELYITNSKDKHESCXXXXXXXXXXTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSH 75
TV ++I++S + S TI E K KLELL G +S M + LY + S
Sbjct: 10 TVTVFISSSLNTFRS---EKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSK 66
Query: 76 LSDNSMLLGQYPVENEMTLFV---EGNYLTDGLESSET-KYVLPEEKYKEHKENLKNFMM 131
L LLG YPV++ + V G L + + S KY + +E Y + ++ +++F+
Sbjct: 67 LDQEDALLGSYPVDDGCRIHVIDHSGARLGEYEDVSRVEKYTISQEAYDQRQDTVRSFLK 126
Query: 132 KQXXXXXXXXXXXXXXXXXXXXXXXXXI-LKDIEVGKRCKINDS--DVRFGTVMFVGETK 188
+ I VG RC++ + R GTVM+VG T
Sbjct: 127 RSKLGRYNEEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTD 186
Query: 189 FSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPVLDPFDELDEI 248
F G W+GV+ DEP GKN+G+V +YFEC+ YG FVKP +T+GDFP D LDEI
Sbjct: 187 FKPGYWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPAVVTVGDFPEEDY--GLDEI 244
>ZFIN|ZDB-GENE-030131-9296 [details] [associations]
symbol:tbcb "tubulin folding cofactor B"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-030131-9296
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 CTD:1155 HOVERGEN:HBG003239 HSSP:Q20728
EMBL:BC044438 IPI:IPI00481671 RefSeq:NP_997940.1 UniGene:Dr.860
ProteinModelPortal:Q803K6 SMR:Q803K6 STRING:Q803K6 PRIDE:Q803K6
GeneID:337350 KEGG:dre:337350 InParanoid:Q803K6 NextBio:20812190
ArrayExpress:Q803K6 Bgee:Q803K6 Uniprot:Q803K6
Length = 246
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 73/212 (34%), Positives = 106/212 (50%)
Query: 42 TIGELKQKLELLTGQMSSNMTISLYNRNHDLVSHLSDNSMLLGQYPVENEMTLFVEGNYL 101
TI E K KLEL+ G +S M + L++ + + L +N LLG Y V+++ + V
Sbjct: 35 TIAEFKSKLELIVGTPASCMDLDLFSSSDKFLQKLDNNEALLGSYHVDDDCRIHVTDRSG 94
Query: 102 TDGLE----SSETKYVLPEEKYKEHKENLKNFMMKQXXXXXXXXXXXXXXXXXXXXXXXX 157
T E S K+ + +E Y++ ++++NF
Sbjct: 95 TQSGEFTDLSKVEKFEISDEAYEKRADSIRNFKKNMKLGRFNEEERAKQEEAVAKKEEEE 154
Query: 158 XILKD-IEVGKRCKIN--DSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVK 214
+ + I VG RCK+ + GTVM+VG F G WVGVK DEP GK++G+V +
Sbjct: 155 KVAAEAIAVGNRCKVQVPGQATKIGTVMYVGTADFKPGYWVGVKYDEPLGKHDGSVNGKR 214
Query: 215 YFECEENYGMFVKPGRLTIGDFPVLD-PFDEL 245
YFECE YG FVKP +T+GDFP D DE+
Sbjct: 215 YFECEPKYGAFVKPLTVTVGDFPEEDYGLDEM 246
>UNIPROTKB|Q5E951 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9913 "Bos
taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
Reactome:REACT_17065 InterPro:IPR000938 Pfam:PF01302 GO:GO:0005829
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 Reactome:REACT_103209
eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 GO:GO:0007023
EMBL:BT021069 EMBL:BC102571 IPI:IPI00697178 RefSeq:NP_001014939.1
UniGene:Bt.55460 ProteinModelPortal:Q5E951 SMR:Q5E951 STRING:Q5E951
PRIDE:Q5E951 Ensembl:ENSBTAT00000019973 GeneID:530447
KEGG:bta:530447 CTD:1155 HOVERGEN:HBG003239 InParanoid:Q5E951
OMA:GKHDGMV OrthoDB:EOG44XJHQ NextBio:20875260 Uniprot:Q5E951
Length = 244
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 75/238 (31%), Positives = 118/238 (49%)
Query: 16 TVELYITNSKDKHESCXXXXXXXXXXTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSH 75
TV ++I++S + S T+ E K KL+L+ G +S M + LY +
Sbjct: 10 TVNVFISSSLNSFRS---QKRYSRSLTVAEFKCKLQLVVGSPASCMELELYGPDDKFCCK 66
Query: 76 LSDNSMLLGQYPVENEMTLFV---EGNYLTDGLESSET-KYVLPEEKYKEHKENLKNFMM 131
L + LLG YPV++ + V G L + + S+ KY + +E Y++ ++++++F+
Sbjct: 67 LDQDDALLGSYPVDDGCRIHVIDHSGARLGEYEDISKVEKYEISQEAYEQRQDSIRSFLK 126
Query: 132 KQXXXXXXXXXXXXXXXXXXXXXXXXXI-LKDIEVGKRCKIND--SDVRFGTVMFVGETK 188
+ I VG RC++ R GTVM+VG T
Sbjct: 127 RNKLGRFNEEERAQQEAENSQRLIEEEAQASTIPVGSRCEVRTPGQPPRRGTVMYVGLTD 186
Query: 189 FSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPVLD-PFDEL 245
F G W+G++ DEP GKN+G+V +YFEC+ YG FVKP +T+GDFP D DE+
Sbjct: 187 FKPGYWIGIRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSVVTVGDFPEEDYGLDEM 244
>RGD|1309965 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
InterPro:IPR000938 Pfam:PF01302 RGD:1309965 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
HOVERGEN:HBG003239 EMBL:DQ447885 IPI:IPI00364093 UniGene:Rn.9550
ProteinModelPortal:Q1W1V7 SMR:Q1W1V7 STRING:Q1W1V7 PRIDE:Q1W1V7
UCSC:RGD:1309965 InParanoid:Q1W1V7 ArrayExpress:Q1W1V7
Genevestigator:Q1W1V7 Uniprot:Q1W1V7
Length = 244
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 79/238 (33%), Positives = 113/238 (47%)
Query: 16 TVELYITNSKDKHESCXXXXXXXXXXTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSH 75
TV ++I++S + S TI E K KLEL+ G +S M + LY + S
Sbjct: 10 TVTVFISSSLNSFRS---EKRYSRSPTIAEFKCKLELVVGSPASCMELELYGADDQFYSK 66
Query: 76 LSDNSMLLGQYPVENEMTLFV---EGNYLTDGLESSET-KYVLPEEKYKEHKENLKNFMM 131
L LLG YPV++ + V G L + + S+ KY + E Y+ + +++FM
Sbjct: 67 LDQEDALLGSYPVDDGCRIHVIDHSGVRLGEYEDVSKVEKYEISPEAYERRQNTVRSFMK 126
Query: 132 KQXXXXXXXXXXXXXXXXXXXXXXXXXILKD-IEVGKRCKIN--DSDVRFGTVMFVGETK 188
+ I VG RC++ + GTVM+VG T
Sbjct: 127 RSKLGPYNEELRAQQEAEAAQRLSEEEAQASAISVGSRCEVRAPGQSLHRGTVMYVGLTD 186
Query: 189 FSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPVLD-PFDEL 245
F G WVGV+ EP GKN+G+V +YFEC+ YG FVKP +T+GDFP D DE+
Sbjct: 187 FKPGYWVGVRYGEPLGKNDGSVNGKRYFECQARYGAFVKPAAVTVGDFPEEDYGLDEM 244
>UNIPROTKB|Q8HXL4 [details] [associations]
symbol:CKAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005634 GO:GO:0005737 eggNOG:COG5244
HOGENOM:HOG000209180 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 EMBL:AJ410870 CTD:1155
HOVERGEN:HBG003239 OMA:GKHDGMV OrthoDB:EOG44XJHQ HSSP:Q20728
EMBL:CU694686 RefSeq:NP_001192332.1 UniGene:Ssc.3245 SMR:Q8HXL4
STRING:Q8HXL4 Ensembl:ENSSSCT00000003232 GeneID:100522808
KEGG:ssc:100522808 Uniprot:Q8HXL4
Length = 244
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 76/238 (31%), Positives = 115/238 (48%)
Query: 16 TVELYITNSKDKHESCXXXXXXXXXXTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSH 75
TV ++I++S + S T+ E K KL+L+ G +S M + LY +
Sbjct: 10 TVTVFISSSLNSFRS---QKRYSRSLTVAEFKDKLQLVVGSPASCMELELYGPDDKFYVK 66
Query: 76 LSDNSMLLGQYPVENEMTLFV---EGNYLTDGLESSET-KYVLPEEKYKEHKENLKNFMM 131
L LLG YPV++ + V G L + + S+ KY + +E Y + + ++++F+
Sbjct: 67 LDQEDALLGSYPVDDGCRIHVIDHSGARLGEYEDMSKVEKYKISQEAYDQRQNSVRSFLK 126
Query: 132 KQXXXXXXXXXXXXXXXXXXXXXXXXXILKD-IEVGKRCKIN--DSDVRFGTVMFVGETK 188
+ I VG RC++ R GTVM+VG T
Sbjct: 127 RNKLGRYNEEERAQREAESSQRLIEEEAQASAIPVGSRCEVRAPGQPPRRGTVMYVGLTD 186
Query: 189 FSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPVLD-PFDEL 245
F G W+GV+ DEP GKN+G+V +YFEC+ YG FVKP +T+GDFP D DE+
Sbjct: 187 FKPGYWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSVVTVGDFPEEDYGLDEM 244
>FB|FBgn0034451 [details] [associations]
symbol:TBCB "tubulin-binding cofactor B" species:7227
"Drosophila melanogaster" [GO:0005856 "cytoskeleton" evidence=ISS]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0035089 "establishment
of apical/basal cell polarity" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007309 "oocyte axis specification" evidence=IMP]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0031122
"cytoplasmic microtubule organization" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005938 GO:GO:0005634
GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031122 GO:GO:0072686
GO:GO:0035089 GO:GO:0007309 UniGene:Dm.19962 FlyBase:FBgn0034451
EMBL:AY061489 ProteinModelPortal:Q7K1S6 STRING:Q7K1S6 PRIDE:Q7K1S6
InParanoid:Q7K1S6 ArrayExpress:Q7K1S6 Bgee:Q7K1S6 Uniprot:Q7K1S6
Length = 271
Score = 177 (67.4 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 165 VGKRCKIN--DSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+G RC++ + R GT+ + G + SG ++GV+ DEP GKNNG+ YF C NY
Sbjct: 187 LGGRCEVTVPGNPTRRGTIRYNGPLEGKSGHFIGVEYDEPLGKNNGSFGGKAYFTCAPNY 246
Query: 223 GMFVKPGRLTIGDFPVLDPFDELDEI 248
G FV P +T+GDFP D F+ DE+
Sbjct: 247 GGFVSPLSVTVGDFPPED-FNMDDEL 271
Score = 121 (47.7 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 28/129 (21%), Positives = 66/129 (51%)
Query: 3 TQVEYMDIMDGGGTVELYITNSKDKHESCXXXXXXXXXXTIGELKQKLELLTGQMSSNMT 62
T+ + I++ G + + + S +++ T+ +LK KLE+LTG + M
Sbjct: 24 TEGKMSTIIETGKSDFIKVNVSNSHNDAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMK 83
Query: 63 ISLYNRNHDLVSHLSDNSMLLGQYPVENEMTLFVEGNYLTDGLESSET-KYVLPEEKYKE 121
+ ++ + VS + +N LG Y + + L V ++ T +S+ K+ L +++Y++
Sbjct: 84 VQVF-KGDTCVSTMDNNDAQLGYYANSDGLRLHVVDSFATFSFDSAPVEKFELSKDQYEQ 142
Query: 122 HKENLKNFM 130
++++N++
Sbjct: 143 RTDSVRNYL 151
>CGD|CAL0005089 [details] [associations]
symbol:orf19.2828 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007023 "post-chaperonin
tubulin folding pathway" evidence=IEA] InterPro:IPR000938
CGD:CAL0005089 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS50245 EMBL:AACQ01000080 eggNOG:NOG249270
RefSeq:XP_715759.1 ProteinModelPortal:Q5A215 STRING:Q5A215
GeneID:3642574 KEGG:cal:CaO19.2828 Uniprot:Q5A215
Length = 282
Score = 233 (87.1 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 62/195 (31%), Positives = 101/195 (51%)
Query: 59 SNMTISLYNRNHDLVSHL-SDNSMLLGQYPVENEMTLFVEGNYLTDGLESSETKYVLPEE 117
S++ + Y+R H + S SD + L Q+ E E + + +G + T++ L EE
Sbjct: 80 SSLNLQSYSRIHVIDSDPNSDVNKLQQQHQQHQEEE--EEKSEIEEGDVAGFTEFQLSEE 137
Query: 118 KYKEHKENLKNFMMKQXXXXXXXXXXXXXXXXXXXXXXXXXILKDIEVGKRCK-IN-DSD 175
YK + ++ N+ K+ LK + +G RC+ IN +++
Sbjct: 138 DYKTRQNSVLNW--KKINKLGRFDPQFQSLQEKLHHETEMK-LKTMSIGSRCRLINIENN 194
Query: 176 VRFGTVMFVGETK-FSSGV--WVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLT 232
R G + F+G+ +G WVG++ DEP GKNNG++ VK FEC+ N+G FV+P +
Sbjct: 195 ERRGIIRFIGKIMPLDNGENDWVGIEFDEPVGKNNGSIDGVKIFECKPNHGSFVRPRLVE 254
Query: 233 IGDFPVLDPFDELDE 247
+GDFP LDPF + D+
Sbjct: 255 VGDFPELDPFADDDD 269
Score = 58 (25.5 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 46 LKQKLELLTGQMSSNMTISLYNRNH 70
LKQKLE +TG N + Y NH
Sbjct: 28 LKQKLESITGISPQNQILHYYPNNH 52
>DICTYBASE|DDB_G0277983 [details] [associations]
symbol:tbcB "tubulin folding cofactor B"
species:44689 "Dictyostelium discoideum" [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000938 dictyBase:DDB_G0277983
Pfam:PF01302 GO:GO:0005737 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
OMA:GKHDGMV RefSeq:XP_642051.1 HSSP:Q20728
ProteinModelPortal:Q54Z01 EnsemblProtists:DDB0266632 GeneID:8621263
KEGG:ddi:DDB_G0277983 Uniprot:Q54Z01
Length = 270
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 72/237 (30%), Positives = 109/237 (45%)
Query: 15 GTVELYITNSKDKHESCXXXXXXXXXXT--IGELKQKLELLTGQMSSNMTISLYNRN--H 70
G V L IT+S ES I + K+KL G M + L + N +
Sbjct: 30 GNVRLEITHSVLTGESLGTNNFKNFSLDLKIKDFKEKLYRFVGTEPKYMELILRDENKVN 89
Query: 71 DLVSHLSDNSMLLGQYPVENEMTLFV----EGNYLTDGLESSET-KYVLPEEKYKEHKEN 125
D+ D+ LG Y ++ M + + N++++ + S+ K V+ EE Y + +
Sbjct: 90 DICKIDDDDDKTLGSYEPKDGMNVHIIDKDPNNFVSELQDISKAPKPVISEEDYNKREGT 149
Query: 126 LKNFMMKQXXXXXXXXXXXXXXXXXXXXXXXXXILKDIEVGKRCK-INDS----DVRFGT 180
K + + +I+VG RCK I+D D R G
Sbjct: 150 YKKWKEENQLKKENDTTATTVTATTTTTNNATDTEIEIKVGDRCKVISDDPTNYDERLGK 209
Query: 181 VMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFP 237
V +VG +FSSGVW+GV+LD P GKN+G+VK +YF+C YG F KP + +GD+P
Sbjct: 210 VQYVGTVEFSSGVWIGVELDLPLGKNDGSVKGKQYFQCSPKYGCFAKPKNVLVGDYP 266
>TAIR|locus:2076224 [details] [associations]
symbol:EMB2804 "AT3G10220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0007021 "tubulin complex
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009524 "phragmoplast" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634
EMBL:CP002686 GO:GO:0051301 GO:GO:0009790 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0009524
UniGene:At.1532 UniGene:At.71154 UniGene:At.71830 OMA:GKHDGMV
EMBL:AK176183 EMBL:AK176266 IPI:IPI00518736 RefSeq:NP_187633.2
PDB:2KJ6 PDBsum:2KJ6 ProteinModelPortal:Q67Z52 SMR:Q67Z52
STRING:Q67Z52 PRIDE:Q67Z52 EnsemblPlants:AT3G10220.1 GeneID:820184
KEGG:ath:AT3G10220 TAIR:At3g10220 InParanoid:Q67Z52
PhylomeDB:Q67Z52 ProtClustDB:CLSN2690532 EvolutionaryTrace:Q67Z52
Genevestigator:Q67Z52 Uniprot:Q67Z52
Length = 243
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 71/246 (28%), Positives = 121/246 (49%)
Query: 11 MDGGGTVELYITNSKDKHESCXXXXXXXXXXTIGELKQKLELLTGQMSSNMTISLYNRNH 70
++G +V L+IT++ K S ++ +K+KL G ++M + LY+ +
Sbjct: 8 LEGDDSVHLHITHANLK--SFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALELYDDSG 65
Query: 71 DLVSHLSDNSMLLGQYPVENEMTLFV---EGNYLTDG--LESSET--KYVLPEEKYKEHK 123
V+ LSD+S LG + + L + + + +T G LE + KY + EE Y +
Sbjct: 66 SKVAVLSDDSRPLGFFSPFDGFRLHIIDLDPSSVTTGGWLEDTSLVEKYNISEEDYAKRT 125
Query: 124 ENLKNFMMKQXXXXXXXXXXXXXXXXXXXXXXXXXILKDIEVGKRCKINDSDVRFGTVMF 183
++ + F K+ + +I+VG RC++ + R G V +
Sbjct: 126 DSFRKFKEKRVSQNPVAAEAKTKENYMED------LCANIKVGDRCQVEPGEKR-GMVKY 178
Query: 184 VGETK-FSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPVLDPF 242
VG + G WVG++ DEP GK++G VK ++FEC G V+P ++ +GD+P DPF
Sbjct: 179 VGRAESLGPGYWVGIQYDEPLGKHDGMVKGTRFFECPRLQGGMVRPDKVKVGDYPERDPF 238
Query: 243 DELDEI 248
+E DEI
Sbjct: 239 EE-DEI 243
>ASPGD|ASPL0000026322 [details] [associations]
symbol:AN5116 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR000626 Pfam:PF00240 Pfam:PF01302 EMBL:BN001305
eggNOG:COG5244 HOGENOM:HOG000209180 OMA:WVGIEFD OrthoDB:EOG42593D
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 PROSITE:PS50053 EMBL:AACD01000088
RefSeq:XP_662720.1 ProteinModelPortal:Q5B2W4 SMR:Q5B2W4
EnsemblFungi:CADANIAT00003100 GeneID:2871408 KEGG:ani:AN5116.2
Uniprot:Q5B2W4
Length = 272
Score = 171 (65.3 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 193 VWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPVLDPFDELDE 247
+WVG++LDEP GKN+G+V +YF C G+FVKP ++ +GDFP L DELDE
Sbjct: 213 IWVGIELDEPTGKNDGSVNGKRYFMCPNRCGVFVKPEKVQVGDFPPLGLDDELDE 267
Score = 70 (29.7 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 40/157 (25%), Positives = 61/157 (38%)
Query: 42 TIGELKQKLELLTGQMSSNMTISLYNRNHDLVSHLSD-NSMLLGQYPVENEMTLFVEGNY 100
T+ ++K KLE +TG S+ + L + H D + ++G++ + + V
Sbjct: 39 TVQQVKAKLETMTGIPPSSQKLRL--KTPGRAEHWVDGDDTIIGEWGLTRGCEIEVHDTR 96
Query: 101 -------LTDGLESSETKYVLPEEKYKEHKENLKNFMMKQXXXXXXXXXXXXXXXXXXXX 153
TD L S E KYVLP E Y+ ++ + Q
Sbjct: 97 PQAARVNFTD-LSSVE-KYVLPTETYESLPNSVLAWKKSQKLGRFDPNALSPVEAMAEQA 154
Query: 154 XXXXXIL--KDIEVGKRCKINDSD---VRFGTVMFVG 185
+ +DI V KR I S VR GT+ FVG
Sbjct: 155 RKDKEEVEKRDISVSKRAIILPSSPPHVRRGTIRFVG 191
>FB|FBgn0001108 [details] [associations]
symbol:Gl "Glued" species:7227 "Drosophila melanogaster"
[GO:0001709 "cell fate determination" evidence=IMP] [GO:0001751
"compound eye photoreceptor cell differentiation" evidence=IMP]
[GO:0016330 "second mitotic wave involved in compound eye
morphogenesis" evidence=IMP] [GO:0042051 "compound eye
photoreceptor development" evidence=IMP] [GO:0042052 "rhabdomere
development" evidence=IMP] [GO:0008090 "retrograde axon cargo
transport" evidence=IMP;NAS] [GO:0003777 "microtubule motor
activity" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS]
[GO:0005869 "dynactin complex" evidence=ISS;NAS;TAS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0048477 "oogenesis"
evidence=NAS] [GO:0045502 "dynein binding" evidence=TAS]
[GO:0001754 "eye photoreceptor cell differentiation" evidence=IMP]
[GO:0051028 "mRNA transport" evidence=IMP] [GO:0034501 "protein
localization to kinetochore" evidence=IMP] [GO:0047497
"mitochondrion transport along microtubule" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IMP] [GO:0051383 "kinetochore organization" evidence=IMP]
[GO:0051299 "centrosome separation" evidence=IMP] [GO:0051225
"spindle assembly" evidence=IMP] [GO:0031616 "spindle pole
centrosome" evidence=IDA] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0045198 "establishment of epithelial cell
apical/basal polarity" evidence=IDA] [GO:0007067 "mitosis"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0035011
"melanotic encapsulation of foreign target" evidence=IMP]
[GO:0035371 "microtubule plus end" evidence=IDA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005737 GO:GO:0006886 EMBL:AE014296
GO:GO:0000776 GO:GO:0007067 GO:GO:0007052 GO:GO:0051225
GO:GO:0048477 GO:GO:0005869 GO:GO:0008090 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0034501 GO:GO:0035371 GO:GO:0051028
GO:GO:0001709 GO:GO:0030286 GO:GO:0003774 GO:GO:0051383
GO:GO:0016330 GO:GO:0031616 GO:GO:0045502 GO:GO:0042052
GO:GO:0045198 GO:GO:0035011 GO:GO:0051299 GO:GO:0005828
GeneTree:ENSGT00700000104055 KO:K04648 InterPro:IPR022157
Pfam:PF12455 EMBL:J02932 EMBL:AY118377 EMBL:BT044559 PIR:A28313
RefSeq:NP_524061.1 UniGene:Dm.12980 ProteinModelPortal:P13496
SMR:P13496 DIP:DIP-21099N IntAct:P13496 MINT:MINT-342315
STRING:P13496 PaxDb:P13496 EnsemblMetazoa:FBtr0075756 GeneID:39536
KEGG:dme:Dmel_CG9206 UCSC:CG9206-RA CTD:39536 FlyBase:FBgn0001108
InParanoid:Q8MT52 OMA:HVYSRTP OrthoDB:EOG49P8DD PhylomeDB:P13496
ChiTaRS:OSTM1 GenomeRNAi:39536 NextBio:814157 Bgee:P13496
GermOnline:CG9206 GO:GO:0047497 Uniprot:P13496
Length = 1265
Score = 203 (76.5 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 37/73 (50%), Positives = 54/73 (73%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
K+++VG R ++ D+ GTV +VG T F+ G WVGV LDEP GKN+G++K +YF+C+E
Sbjct: 4 KNLKVGARVELTGKDL-LGTVAYVGMTSFAVGKWVGVVLDEPKGKNSGSIKGQQYFQCDE 62
Query: 221 NYGMFVKPGRLTI 233
N GMFV+P +L +
Sbjct: 63 NCGMFVRPTQLRL 75
>POMBASE|SPAC13D6.05 [details] [associations]
symbol:alp11 "tubulin specific chaperone cofactor B"
species:4896 "Schizosaccharomyces pombe" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005874 "microtubule" evidence=IEA] [GO:0006457
"protein folding" evidence=TAS] [GO:0007021 "tubulin complex
assembly" evidence=ISO] [GO:0043014 "alpha-tubulin binding"
evidence=IPI] [GO:0072668 "tubulin complex biogenesis"
evidence=ISO] InterPro:IPR000938 InterPro:IPR000626 SMART:SM00213
PomBase:SPAC13D6.05 Pfam:PF01302 GO:GO:0005829 GO:GO:0005634
GO:GO:0006457 GO:GO:0000226 EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:AB008750 PIR:T43283 RefSeq:NP_593683.2
ProteinModelPortal:Q10235 STRING:Q10235 EnsemblFungi:SPAC13D6.05.1
GeneID:2542814 KEGG:spo:SPAC13D6.05 eggNOG:COG5244
HOGENOM:HOG000209180 OMA:WVGIEFD OrthoDB:EOG42593D NextBio:20803856
GO:GO:0005874 GO:GO:0007021 Gene3D:2.30.30.190 InterPro:IPR019955
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
PROSITE:PS50053 Uniprot:Q10235
Length = 234
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 51/215 (23%), Positives = 98/215 (45%)
Query: 42 TIGELKQKLELLTGQMSSNMTISLYNRNHDLVSHL---SDNSMLLGQYPVENEMTLFVEG 98
T+ +LK KL + G ++ + + H+ + ++ LG++ ++ T+ VE
Sbjct: 24 TVSQLKTKLVPIVGTPEQYQKLTYEPASSTVPGHVFTSEEENLDLGEFKLQPLGTIVVED 83
Query: 99 N---YLT---DGLESSETKYVLPEEKYKEHKENLKNFMMKQXXXXXXXXXXXXXXXXXXX 152
+L D L S KYV+P E+Y+ +++ + K+
Sbjct: 84 TRPPHLRLDFDDL-SQVDKYVMPREQYENRTDSV--YAWKKRNQLGRFNPDFEASKASRQ 140
Query: 153 XXXXXXILKDIEVGKRCKINDSDVRFGTVMFVGETKF--SSGVWVGVKLDEPFGKNNGTV 210
++ D++ + + R+GT+ ++G + +WVGV+ DEP GKN+GTV
Sbjct: 141 ESLKRELV-DLQKNLNSRCCAAGERYGTIRYIGLVPEINNDNLWVGVEFDEPVGKNDGTV 199
Query: 211 KDVKYFECEENYGMFVKPGRLTIGDFPVLDPFDEL 245
+YF + +G F++ + +GDFP D + L
Sbjct: 200 SGKRYFNAKNKHGSFLRSSEVEVGDFPPEDILEGL 234
>FB|FBgn0019968 [details] [associations]
symbol:Khc-73 "Kinesin-73" species:7227 "Drosophila
melanogaster" [GO:0003777 "microtubule motor activity"
evidence=ISS;IDA] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0005871 "kinesin complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0051294 "establishment of spindle orientation"
evidence=IMP] [GO:0050803 "regulation of synapse structure and
activity" evidence=IMP] [GO:0035371 "microtubule plus end"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
SMART:SM00240 Pfam:PF01302 EMBL:AE013599 GO:GO:0005524
GO:GO:0005871 GO:GO:0042803 GeneTree:ENSGT00700000104150
GO:GO:0050803 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005769 GO:GO:0003777 GO:GO:0035371
GO:GO:0007018 Gene3D:3.40.850.10 GO:GO:0051294 KO:K10392
OMA:SKNGQPA InterPro:IPR022140 InterPro:IPR022164 Pfam:PF12473
Pfam:PF12423 RefSeq:NP_609201.3 RefSeq:NP_788356.1 UniGene:Dm.350
SMR:A1ZA18 IntAct:A1ZA18 STRING:A1ZA18 EnsemblMetazoa:FBtr0087357
GeneID:36718 KEGG:dme:Dmel_CG8183 UCSC:CG8183-RA CTD:36718
FlyBase:FBgn0019968 InParanoid:A1ZA18 OrthoDB:EOG48W9GT
GenomeRNAi:36718 NextBio:800035 Uniprot:A1ZA18
Length = 1921
Score = 172 (65.6 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
I VG+ I + G + FVG T+F G W+GV+LD P GKN+G+VK V+YF+C+ +
Sbjct: 1805 IVVGESVLIRPYNTS-GVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKPKH 1863
Query: 223 GMFVKPGRLTI 233
GMFV+ +L +
Sbjct: 1864 GMFVRSDKLML 1874
Score = 51 (23.0 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 105 LESSETKYVLPEEKYKEHKENLKN 128
+E E K + E Y+EHKE + N
Sbjct: 738 MEKLENKLIDMREMYQEHKERVLN 761
Score = 38 (18.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 20/82 (24%), Positives = 34/82 (41%)
Query: 44 GELKQKLELLTGQMSSN-MTISLYNRNHDLVSHLSDNSMLLGQYPVENEMTLFVEGNYLT 102
G L+ ++E + GQM + M S+ + D D P N++T V
Sbjct: 829 GRLQVEIERIAGQMPQDRMCESVSESSGDSRDEYDDPVD-----PTSNQITCRVTIK-CA 882
Query: 103 DGLESSETKYVLPEEKYKEHKE 124
GL S + +V + + H+E
Sbjct: 883 SGLPLSLSNFVFCQYTFWGHQE 904
>WB|WBGene00001017 [details] [associations]
symbol:dnc-1 species:6239 "Caenorhabditis elegans"
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0016358 "dendrite
development" evidence=IMP] [GO:0035047 "centrosomal and pronuclear
rotation" evidence=IMP] [GO:0007059 "chromosome segregation"
evidence=IMP] [GO:0000132 "establishment of mitotic spindle
orientation" evidence=IMP] [GO:0007097 "nuclear migration"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0030496 "midbody" evidence=IDA] [GO:0051233 "spindle midzone"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0008092 "cytoskeletal protein binding"
evidence=ISS] [GO:0045505 "dynein intermediate chain binding"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0060069 "Wnt receptor signaling pathway, regulating spindle
positioning" evidence=IEP] [GO:0005869 "dynactin complex"
evidence=IDA] [GO:0035371 "microtubule plus end" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005938 GO:GO:0009792
GO:GO:0000132 GO:GO:0002009 GO:GO:0035046 GO:GO:0005813
GO:GO:0007059 GO:GO:0000776 GO:GO:0007067 GO:GO:0051233
GO:GO:0016358 GO:GO:0005869 GO:GO:0030496 GO:GO:0008017
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245
GO:GO:0000235 GO:GO:0035371 GeneTree:ENSGT00700000104055 KO:K04648
InterPro:IPR022157 Pfam:PF12455 GO:GO:0035047 EMBL:Z69385
GO:GO:0060069 GO:GO:0045505 GeneID:177987 KEGG:cel:CELE_ZK593.5
CTD:177987 RefSeq:NP_001255521.1 ProteinModelPortal:E2JKZ0
SMR:E2JKZ0 IntAct:E2JKZ0 EnsemblMetazoa:ZK593.5b WormBase:ZK593.5b
OMA:GTLYSEM Uniprot:E2JKZ0
Length = 1351
Score = 188 (71.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 36/72 (50%), Positives = 50/72 (69%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYG 223
E+G R K + + G V+F G+T+F+ G WVGV LD GKNNGTV++V+YFECE N+G
Sbjct: 4 EIGTRVKTSSGN---GRVVFCGQTQFAEGDWVGVILDTATGKNNGTVQNVQYFECEPNFG 60
Query: 224 MFVKPGRLTIGD 235
+FVK + + D
Sbjct: 61 VFVKSSAVELED 72
>UNIPROTKB|J9P0I9 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000938
InterPro:IPR004827 SMART:SM00338 Pfam:PF01302 GO:GO:0043565
GO:GO:0003700 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
EMBL:AAEX03004228 EMBL:AAEX03004229 EMBL:AAEX03004230
Ensembl:ENSCAFT00000048444 Uniprot:J9P0I9
Length = 702
Score = 184 (69.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 36/73 (49%), Positives = 48/73 (65%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D VG+R +N V+ G V ++GET+F+ G W GV LDEP GKN+G V V+YFEC
Sbjct: 79 LGDFAVGERVWVNG--VKPGVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVGGVRYFECP 136
Query: 220 ENYGMFVKPGRLT 232
G+F +P +LT
Sbjct: 137 ALQGIFTRPSKLT 149
Score = 171 (65.3 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
KD+ +G R + + + G V +VGET F+ G W GV+LDEP GKN+G V +YF+C
Sbjct: 220 KDLRLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 277
Query: 221 NYGMFVKPGR-LTIGDFPVLDP 241
+G+F + + IG FP P
Sbjct: 278 KFGLFAPIHKVIRIG-FPSTSP 298
>MGI|MGI:1919100 [details] [associations]
symbol:Clip4 "CAP-GLY domain containing linker protein
family, member 4" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248
MGI:MGI:1919100 Pfam:PF01302 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 HOGENOM:HOG000007206
HOVERGEN:HBG057079 KO:K10423 EMBL:AK018895 EMBL:AK075758
EMBL:BC011280 EMBL:BC035226 IPI:IPI00284864 IPI:IPI00378257
IPI:IPI00553520 RefSeq:NP_084455.2 RefSeq:NP_780587.1
UniGene:Mm.196382 PDB:1WHJ PDB:1WHK PDBsum:1WHJ PDBsum:1WHK
ProteinModelPortal:Q8CI96 SMR:Q8CI96 STRING:Q8CI96
PhosphoSite:Q8CI96 PRIDE:Q8CI96 Ensembl:ENSMUST00000024854
GeneID:78785 KEGG:mmu:78785 UCSC:uc008dmw.2 UCSC:uc008dmz.1
UCSC:uc012awx.1 CTD:79745 InParanoid:Q8CI96 OMA:FATQLID
OrthoDB:EOG4V6ZGH EvolutionaryTrace:Q8CI96 NextBio:349496
Bgee:Q8CI96 Genevestigator:Q8CI96 GermOnline:ENSMUSG00000024059
Uniprot:Q8CI96
Length = 704
Score = 164 (62.8 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 177 RFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDF 236
R GT+ F G T F+ G W G++L++P GKN+G+V V+YF C YG+F P R+
Sbjct: 496 RVGTIKFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQ---- 551
Query: 237 PVLDPFDELDEI 248
+ D D L EI
Sbjct: 552 RLSDSLDTLSEI 563
Score = 163 (62.4 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+++G R I V GT+ F G T+F+SG W G++LDEP GKNNG+V V+YF+C Y
Sbjct: 283 LKLGDRVVIAGQKV--GTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGRVQYFKCAPKY 340
Query: 223 GMFVKPGRLT 232
G+F +++
Sbjct: 341 GIFAPLSKIS 350
Score = 161 (61.7 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 166 GKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMF 225
G + + S+ TV +VG T F+SG+W+G++L GKN+G V D +YF C+ NYG+
Sbjct: 625 GSQVLLTSSN-EMATVRYVGPTDFASGIWLGLELRSAKGKNDGAVGDKRYFTCKPNYGVL 683
Query: 226 VKPGRLT 232
V+P R+T
Sbjct: 684 VRPSRVT 690
Score = 44 (20.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 57 MSSNMTISLYNRNHDLVSHLSDNSMLLGQ 85
+ S+ T + N +H+ HL + +++GQ
Sbjct: 467 LKSSATSAANNSHHEGALHLGERVLVVGQ 495
>UNIPROTKB|F1RJL6 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:CU914415
EMBL:FP340223 Ensembl:ENSSSCT00000008462 Uniprot:F1RJL6
Length = 827
Score = 183 (69.5 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 36/73 (49%), Positives = 48/73 (65%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D VG+R +N V+ G V ++GET+F+ G W GV LDEP GKN+G V V+YFEC
Sbjct: 76 LGDFVVGERVWVNG--VKPGVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVGGVRYFECP 133
Query: 220 ENYGMFVKPGRLT 232
G+F +P +LT
Sbjct: 134 ALQGIFTRPSKLT 146
Score = 133 (51.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKY 215
KD+ +G R + + + G V +VGET F+ G W GV+LDEP GKN+G V +Y
Sbjct: 217 KDLRLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRY 269
>UNIPROTKB|C9JJD0 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00873712 ProteinModelPortal:C9JJD0 SMR:C9JJD0 STRING:C9JJD0
Ensembl:ENST00000454119 HOGENOM:HOG000213789 ArrayExpress:C9JJD0
Bgee:C9JJD0 Uniprot:C9JJD0
Length = 121
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 8 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 66
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 67 GHGIFVRQSQIQV 79
>UNIPROTKB|C9JJN7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00465112 ProteinModelPortal:C9JJN7 SMR:C9JJN7 STRING:C9JJN7
PRIDE:C9JJN7 Ensembl:ENST00000437375 ArrayExpress:C9JJN7
Bgee:C9JJN7 Uniprot:C9JJN7
Length = 87
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 8 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 66
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 67 GHGIFVRQSQIQV 79
>UNIPROTKB|E1BQI8 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:AADN02026009
IPI:IPI00579643 Ensembl:ENSGALT00000001972 Uniprot:E1BQI8
Length = 1040
Score = 183 (69.5 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D VG+R +N V+ G + ++GET+F+ G W GV LD+P GKN+G+V V+YFEC+
Sbjct: 67 LGDFVVGERVWVNG--VKPGVIQYLGETQFAPGQWAGVVLDDPVGKNDGSVGGVRYFECQ 124
Query: 220 ENYGMFVKPGRLT 232
G+F +P +LT
Sbjct: 125 PLQGIFTRPSKLT 137
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
KD+ +G R + + + G V +VGET F+ G W GV+LDEP GKN+G V +YF+C
Sbjct: 208 KDLRLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 265
Query: 221 NYGMFVKPGR-LTIGDFPVLDP 241
+G+F + + IG FP P
Sbjct: 266 KFGLFAPIHKVIRIG-FPSTSP 286
>RGD|67404 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10116 "Rattus norvegicus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005874 "microtubule" evidence=ISO] [GO:0005881
"cytoplasmic microtubule" evidence=ISO] [GO:0008017 "microtubule
binding" evidence=ISO;TAS] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0031116 "positive
regulation of microtubule polymerization" evidence=ISO] [GO:0035371
"microtubule plus end" evidence=ISO] [GO:0051010 "microtubule
plus-end binding" evidence=ISO] [GO:0044354 "macropinosome"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 SMART:SM00343
Pfam:PF01302 RGD:67404 GO:GO:0042803 GO:GO:0008270 GO:GO:0003676
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 HSSP:Q20728
IPI:IPI00201975 RefSeq:NP_113933.2 UniGene:Rn.22069 GeneID:65201
KEGG:rno:65201 NextBio:614156 EMBL:AJ237670
ProteinModelPortal:Q9JK25 SMR:Q9JK25 IntAct:Q9JK25 MINT:MINT-2738141
STRING:Q9JK25 PhosphoSite:Q9JK25 PRIDE:Q9JK25 UCSC:RGD:67404
ArrayExpress:Q9JK25 Genevestigator:Q9JK25 Uniprot:Q9JK25
Length = 1320
Score = 184 (69.8 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN 221
D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+YF+CE
Sbjct: 57 DFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPL 114
Query: 222 YGMFVKPGRLT 232
G+F +P +LT
Sbjct: 115 KGIFTRPSKLT 125
Score = 179 (68.1 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+++++G R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 209 RELKIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 266
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 267 KYGLFAPVHKVTKIGFPSTTP 287
>UNIPROTKB|F1MAH8 [details] [associations]
symbol:Clip1 "Protein Clip1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 RGD:67404
GO:GO:0008270 GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:6249 KO:K10421 IPI:IPI00201975
RefSeq:NP_113933.2 UniGene:Rn.22069 PRIDE:F1MAH8
Ensembl:ENSRNOT00000001685 GeneID:65201 KEGG:rno:65201
NextBio:614156 ArrayExpress:F1MAH8 Uniprot:F1MAH8
Length = 1320
Score = 184 (69.8 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN 221
D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+YF+CE
Sbjct: 57 DFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPL 114
Query: 222 YGMFVKPGRLT 232
G+F +P +LT
Sbjct: 115 KGIFTRPSKLT 125
Score = 179 (68.1 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+++++G R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 209 RELKIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 266
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 267 KYGLFAPVHKVTKIGFPSTTP 287
>MGI|MGI:1928401 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10090 "Mus musculus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005881 "cytoplasmic microtubule"
evidence=IDA] [GO:0005882 "intermediate filament" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO;IDA] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031116 "positive regulation of microtubule
polymerization" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0035371 "microtubule plus end" evidence=IDA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051010 "microtubule plus-end binding"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158
SMART:SM00343 MGI:MGI:1928401 Pfam:PF01302 GO:GO:0005813
GO:GO:0046872 GO:GO:0006810 GO:GO:0008270 GO:GO:0003676
GO:GO:0030659 GO:GO:0001726 GO:GO:0044354 GO:GO:0008017
GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GO:GO:0035371 GO:GO:0031116 GeneTree:ENSGT00700000104055 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 OrthoDB:EOG42Z4PQ
EMBL:AK220172 EMBL:BC007191 IPI:IPI00123063 IPI:IPI00761270
RefSeq:NP_062739.2 UniGene:Mm.241109 UniGene:Mm.441802 PDB:2CP7
PDBsum:2CP7 ProteinModelPortal:Q922J3 SMR:Q922J3 IntAct:Q922J3
STRING:Q922J3 PhosphoSite:Q922J3 PaxDb:Q922J3 PRIDE:Q922J3
Ensembl:ENSMUST00000111564 Ensembl:ENSMUST00000111566 GeneID:56430
KEGG:mmu:56430 UCSC:uc008zoa.1 UCSC:uc008zob.1
EvolutionaryTrace:Q922J3 NextBio:312602 Bgee:Q922J3
CleanEx:MM_CLIP1 Genevestigator:Q922J3
GermOnline:ENSMUSG00000049550 Uniprot:Q922J3
Length = 1391
Score = 184 (69.8 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN 221
D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+YF+CE
Sbjct: 57 DFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPL 114
Query: 222 YGMFVKPGRLT 232
G+F +P +LT
Sbjct: 115 KGIFTRPSKLT 125
Score = 180 (68.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
++++VG R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 209 RELKVGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 266
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 267 KYGLFAPVHKVTKIGFPSTTP 287
>UNIPROTKB|E2QWB0 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 GO:GO:0008270
GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
CTD:6249 KO:K10421 OMA:MEMSHNQ EMBL:AAEX03014651
RefSeq:XP_003639950.1 Ensembl:ENSCAFT00000012632 GeneID:477461
KEGG:cfa:477461 Uniprot:E2QWB0
Length = 1438
Score = 184 (69.8 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN 221
D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+YF+CE
Sbjct: 57 DFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPL 114
Query: 222 YGMFVKPGRLT 232
G+F +P +LT
Sbjct: 115 KGIFTRPSKLT 125
Score = 179 (68.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+++++G R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 210 RELKIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 267
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 268 KYGLFAPVHKVTKIGFPSTTP 288
>UNIPROTKB|E2QWD0 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 GO:GO:0008270
GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
EMBL:AAEX03014651 Ensembl:ENSCAFT00000012621 NextBio:20852935
Uniprot:E2QWD0
Length = 1438
Score = 184 (69.8 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN 221
D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+YF+CE
Sbjct: 57 DFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPL 114
Query: 222 YGMFVKPGRLT 232
G+F +P +LT
Sbjct: 115 KGIFTRPSKLT 125
Score = 179 (68.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+++++G R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 210 RELKIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 267
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 268 KYGLFAPVHKVTKIGFPSTTP 288
>UNIPROTKB|P30622 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=TAS]
[GO:0000776 "kinetochore" evidence=TAS] [GO:0007067 "mitosis"
evidence=TAS] [GO:0046872 "metal ion binding" evidence=NAS]
[GO:0031116 "positive regulation of microtubule polymerization"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0001578
"microtubule bundle formation" evidence=IMP] [GO:0015631 "tubulin
binding" evidence=IDA] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IMP]
[GO:0044354 "macropinosome" evidence=IDA] [GO:0035371 "microtubule
plus end" evidence=IDA] [GO:0051010 "microtubule plus-end binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISS] [GO:0005768 "endosome"
evidence=TAS] [GO:0005882 "intermediate filament" evidence=TAS]
[GO:0000087 "M phase of mitotic cell cycle" evidence=TAS]
[GO:0000236 "mitotic prometaphase" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:M97501 Pfam:PF01302 GO:GO:0005829 GO:GO:0005813
Pathway_Interaction_DB:lis1pathway Reactome:REACT_115566
GO:GO:0042803 Reactome:REACT_21300 GO:GO:0000776 GO:GO:0046872
GO:GO:0005768 GO:GO:0006810 GO:GO:0008270 GO:GO:0005882
GO:GO:0003676 GO:GO:0030659 GO:GO:0001726 GO:GO:0001578
eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GO:GO:0051010 GO:GO:0031116 GO:GO:0000236 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 OrthoDB:EOG42Z4PQ
EMBL:X64838 EMBL:BC114213 EMBL:BC117209 EMBL:BC126305
IPI:IPI00013455 IPI:IPI00027172 IPI:IPI00217113 PIR:A43336
PIR:S22695 RefSeq:NP_001234926.1 RefSeq:NP_002947.1
RefSeq:NP_937883.1 UniGene:Hs.524809 PDB:2CP5 PDB:2CP6 PDB:2E3H
PDB:2E3I PDB:2E4H PDB:2HQH PDB:2QK0 PDB:3E2U PDB:3RDV PDBsum:2CP5
PDBsum:2CP6 PDBsum:2E3H PDBsum:2E3I PDBsum:2E4H PDBsum:2HQH
PDBsum:2QK0 PDBsum:3E2U PDBsum:3RDV ProteinModelPortal:P30622
SMR:P30622 DIP:DIP-42826N IntAct:P30622 MINT:MINT-1781312
STRING:P30622 PhosphoSite:P30622 DMDM:261260059 PaxDb:P30622
PRIDE:P30622 Ensembl:ENST00000302528 Ensembl:ENST00000358808
Ensembl:ENST00000537178 Ensembl:ENST00000540338 GeneID:6249
KEGG:hsa:6249 UCSC:uc001ucg.2 UCSC:uc001uch.1 UCSC:uc001uci.1
GeneCards:GC12M122755 HGNC:HGNC:10461 HPA:CAB004399 HPA:HPA026678
MIM:179838 neXtProt:NX_P30622 PharmGKB:PA162382349 OMA:MEMSHNQ
ChiTaRS:CLIP1 EvolutionaryTrace:P30622 GenomeRNAi:6249
NextBio:24265 ArrayExpress:P30622 Bgee:P30622 CleanEx:HS_CLIP1
Genevestigator:P30622 GermOnline:ENSG00000130779 Uniprot:P30622
Length = 1438
Score = 184 (69.8 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN 221
D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+YF+CE
Sbjct: 57 DFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPL 114
Query: 222 YGMFVKPGRLT 232
G+F +P +LT
Sbjct: 115 KGIFTRPSKLT 125
Score = 179 (68.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+++++G R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 210 RELKIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 267
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 268 KYGLFAPVHKVTKIGFPSTTP 288
>UNIPROTKB|E1BGH3 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:DAAA02058193
IPI:IPI00716251 Ensembl:ENSBTAT00000015759 Uniprot:E1BGH3
Length = 1047
Score = 181 (68.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN 221
D VG+R +N V+ G V ++GET+F+ G W GV LDEP GKN+G V V+YFEC
Sbjct: 77 DFVVGERVWVNG--VKPGVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVGGVRYFECPAL 134
Query: 222 YGMFVKPGRLT 232
G+F +P +LT
Sbjct: 135 QGIFTRPSKLT 145
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
KD+ +G R + + + G V +VGET F+ G W GV+LDEP GKN+G V +YF+C
Sbjct: 216 KDLRLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 273
Query: 221 NYGMFVKPGR-LTIGDFPVLDP 241
+G+F + + IG FP P
Sbjct: 274 KFGLFAPIHKVIRIG-FPSTSP 294
>UNIPROTKB|E3W9A2 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051010 "microtubule plus-end binding" evidence=IEA]
[GO:0044354 "macropinosome" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000938 InterPro:IPR001878
SMART:SM00343 Pfam:PF01302 GO:GO:0005813 GO:GO:0008270
GO:GO:0003676 GO:GO:0044354 GO:GO:0001578 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 CTD:6249 KO:K10421 EMBL:DAAA02045251
EMBL:DAAA02045252 IPI:IPI00973697 RefSeq:NP_001179752.1
UniGene:Bt.56241 PRIDE:E3W9A2 Ensembl:ENSBTAT00000022319
GeneID:534624 KEGG:bta:534624 OMA:DSKQTNE NextBio:20876476
Uniprot:E3W9A2
Length = 1427
Score = 182 (69.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN 221
D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+YF+CE
Sbjct: 57 DFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCELL 114
Query: 222 YGMFVKPGRLT 232
G+F +P +LT
Sbjct: 115 KGIFTRPSKLT 125
Score = 179 (68.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+++++G R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 210 RELKIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 267
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 268 KYGLFAPVHKVTKIGFPSTTP 288
>UNIPROTKB|C9JTE5 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JTE5 SMR:C9JTE5 STRING:C9JTE5
Ensembl:ENST00000421392 ArrayExpress:C9JTE5 Bgee:C9JTE5
Uniprot:C9JTE5
Length = 76
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 8 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 66
Query: 221 NYGMFVK 227
+G+FV+
Sbjct: 67 GHGIFVR 73
>UNIPROTKB|C9JZA4 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JZA4 SMR:C9JZA4
Ensembl:ENST00000413111 Bgee:C9JZA4 Uniprot:C9JZA4
Length = 76
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 8 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 66
Query: 221 NYGMFVK 227
+G+FV+
Sbjct: 67 GHGIFVR 73
>UNIPROTKB|Q9UDT6 [details] [associations]
symbol:CLIP2 "CAP-Gly domain-containing linker protein 2"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=TAS] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005875
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881 Orphanet:904
HOGENOM:HOG000092755 HOVERGEN:HBG007123 EMBL:AB006629 EMBL:AC005015
EMBL:AF041059 EMBL:AF041055 EMBL:AF041056 EMBL:AF041057
EMBL:AF041058 IPI:IPI00019642 IPI:IPI00246616 RefSeq:NP_003379.3
RefSeq:NP_115797.1 UniGene:Hs.647018 PDB:2CP2 PDB:2CP3 PDBsum:2CP2
PDBsum:2CP3 ProteinModelPortal:Q9UDT6 SMR:Q9UDT6 IntAct:Q9UDT6
STRING:Q9UDT6 PhosphoSite:Q9UDT6 DMDM:74753268 PaxDb:Q9UDT6
PRIDE:Q9UDT6 DNASU:7461 Ensembl:ENST00000223398
Ensembl:ENST00000361545 Ensembl:ENST00000395060
Ensembl:ENST00000573159 Ensembl:ENST00000575290
Ensembl:ENST00000575893 GeneID:7461 KEGG:hsa:7461 UCSC:uc003uam.3
CTD:7461 GeneCards:GC07P073703 HGNC:HGNC:2586 HPA:CAB020767
HPA:HPA020430 MIM:603432 neXtProt:NX_Q9UDT6 PharmGKB:PA27085
KO:K10422 OMA:HWRAQLE PhylomeDB:Q9UDT6 ChiTaRS:CLIP2
EvolutionaryTrace:Q9UDT6 GenomeRNAi:7461 NextBio:29216
ArrayExpress:Q9UDT6 Bgee:Q9UDT6 CleanEx:HS_CLIP2
Genevestigator:Q9UDT6 GermOnline:ENSG00000106665 Uniprot:Q9UDT6
Length = 1046
Score = 180 (68.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D VG+R +N V+ G V ++GET+F+ G W GV LD+P GKN+G V V+YFEC
Sbjct: 76 LGDFVVGERVWVNG--VKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECP 133
Query: 220 ENYGMFVKPGRLT 232
G+F +P +LT
Sbjct: 134 ALQGIFTRPSKLT 146
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
KD+ +G R + + + G V +VGET F+ G W GV+LDEP GKN+G V +YF+C
Sbjct: 217 KDLRLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 274
Query: 221 NYGMFVKPGR-LTIGDFPVLDP 241
+G+F + + IG FP P
Sbjct: 275 KFGLFAPIHKVIRIG-FPSTSP 295
>MGI|MGI:1313136 [details] [associations]
symbol:Clip2 "CAP-GLY domain containing linker protein 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005881 "cytoplasmic microtubule"
evidence=ISO;IDA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0051010 "microtubule plus-end binding" evidence=ISO]
InterPro:IPR000938 MGI:MGI:1313136 Pfam:PF01302 GO:GO:0005875
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 HOGENOM:HOG000092755
HOVERGEN:HBG007123 CTD:7461 KO:K10422 OMA:HWRAQLE EMBL:AJ228863
EMBL:AJ228865 EMBL:AJ228868 EMBL:AJ228869 EMBL:AJ228870
EMBL:AJ228872 EMBL:AJ228876 EMBL:AJ228880 EMBL:AJ228867
EMBL:AJ228875 EMBL:AJ228871 EMBL:AJ228873 EMBL:AJ228877
EMBL:AJ228866 EMBL:AJ228879 EMBL:AJ228878 EMBL:AJ228874
EMBL:AF289667 EMBL:AF289664 EMBL:BC039162 EMBL:BC053048
IPI:IPI00408543 IPI:IPI00467854 PIR:T42720 RefSeq:NP_001034251.1
RefSeq:NP_034120.2 UniGene:Mm.255138 ProteinModelPortal:Q9Z0H8
SMR:Q9Z0H8 IntAct:Q9Z0H8 STRING:Q9Z0H8 PhosphoSite:Q9Z0H8
PaxDb:Q9Z0H8 PRIDE:Q9Z0H8 Ensembl:ENSMUST00000036999
Ensembl:ENSMUST00000100647 GeneID:269713 KEGG:mmu:269713
UCSC:uc008zwi.1 UCSC:uc008zwj.1 InParanoid:Q9Z0H8 OrthoDB:EOG4X3H0M
NextBio:393005 Bgee:Q9Z0H8 CleanEx:MM_CLIP2 Genevestigator:Q9Z0H8
GermOnline:ENSMUSG00000063146 Uniprot:Q9Z0H8
Length = 1047
Score = 180 (68.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D VG+R +N V+ G V ++GET+F+ G W GV LD+P GKN+G V V+YFEC
Sbjct: 77 LGDFVVGERVWVNG--VKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECP 134
Query: 220 ENYGMFVKPGRLT 232
G+F +P +LT
Sbjct: 135 ALQGIFTRPSKLT 147
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
KD+ +G R + + + G V +VGET F+ G W GV+LDEP GKN+G V +YF+C
Sbjct: 218 KDLHLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 275
Query: 221 NYGMFVKPGR-LTIGDFPVLDP 241
+G+F + + IG FP P
Sbjct: 276 KFGLFAPIHKVIRIG-FPSTSP 296
>UNIPROTKB|O42184 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0044354 "macropinosome" evidence=IEA]
[GO:0051010 "microtubule plus-end binding" evidence=IEA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
Pfam:PF01302 GO:GO:0005813 GO:GO:0046872 GO:GO:0006810
GO:GO:0008270 GO:GO:0003676 GO:GO:0030659 GO:GO:0001726
GO:GO:0044354 GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:AF014012 EMBL:AF020764
EMBL:AF045650 EMBL:AF045651 IPI:IPI00572978 IPI:IPI00576988
IPI:IPI00582575 IPI:IPI00603875 RefSeq:NP_990273.1 UniGene:Gga.3130
ProteinModelPortal:O42184 SMR:O42184 STRING:O42184 PRIDE:O42184
Ensembl:ENSGALT00000007110 Ensembl:ENSGALT00000007113 GeneID:395784
KEGG:gga:395784 CTD:6249 HOGENOM:HOG000092755 HOVERGEN:HBG007123
InParanoid:O42184 KO:K10421 OMA:SRTEGEA OrthoDB:EOG42Z4PQ
NextBio:20815852 Uniprot:O42184
Length = 1433
Score = 180 (68.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 32/71 (45%), Positives = 49/71 (69%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN 221
D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+YF+CE
Sbjct: 58 DFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPL 115
Query: 222 YGMFVKPGRLT 232
G+F +P +L+
Sbjct: 116 RGIFTRPSKLS 126
Score = 179 (68.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+++++G R + + + G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+
Sbjct: 213 RELKIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 270
Query: 221 NYGMFVKPGRLTIGDFPVLDP 241
YG+F ++T FP P
Sbjct: 271 RYGLFAPVHKVTKIGFPSTTP 291
>RGD|62019 [details] [associations]
symbol:Clip2 "CAP-GLY domain containing linker protein 2"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA;ISO;IDA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=NAS] [GO:0008017 "microtubule
binding" evidence=IDA;TAS] [GO:0030425 "dendrite" evidence=TAS]
[GO:0042599 "lamellar body" evidence=TAS] [GO:0051010 "microtubule
plus-end binding" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
RGD:62019 GO:GO:0005875 GO:GO:0030425 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 GO:GO:0007026
GO:GO:0042599 HOGENOM:HOG000092755 HOVERGEN:HBG007123 CTD:7461
KO:K10422 OrthoDB:EOG4X3H0M EMBL:AJ000485 IPI:IPI00195929 PIR:T42734
RefSeq:NP_068837.1 UniGene:Rn.10893 ProteinModelPortal:O55156
SMR:O55156 IntAct:O55156 STRING:O55156 PhosphoSite:O55156
PRIDE:O55156 GeneID:29264 KEGG:rno:29264 UCSC:RGD:62019
InParanoid:O55156 NextBio:608596 ArrayExpress:O55156
Genevestigator:O55156 Uniprot:O55156
Length = 1046
Score = 177 (67.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D VG+R +N V+ G V ++GET+F+ G W GV LD+P GKN+G V ++YFEC
Sbjct: 77 LGDFVVGERVWVNG--VKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGLRYFECP 134
Query: 220 ENYGMFVKPGRLT 232
G+F +P +LT
Sbjct: 135 ALQGIFTRPSKLT 147
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
KD+ +G R + + + G V +VGET F+ G W GV+LDEP GKN+G V +YF+C
Sbjct: 218 KDLHLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 275
Query: 221 NYGMFVKPGR-LTIGDFPVLDP 241
+G+F + + IG FP P
Sbjct: 276 KFGLFAPIHKVIRIG-FPSTSP 296
>UNIPROTKB|P35458 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005737 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0030286 GO:GO:0003774 EMBL:X62773
IPI:IPI00600697 PIR:A41642 RefSeq:NP_001026538.1 UniGene:Gga.48036
ProteinModelPortal:P35458 STRING:P35458 PRIDE:P35458 GeneID:426238
KEGG:gga:426238 CTD:1639 eggNOG:KOG0971 HOVERGEN:HBG004956
KO:K04648 OrthoDB:EOG43TZTR NextBio:20827907 InterPro:IPR022157
Pfam:PF12455 Uniprot:P35458
Length = 1224
Score = 177 (67.4 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
K ++VG R ++ R GTV +VG T ++G WVGV LDE GKN+GTV+ KYF CEE
Sbjct: 26 KPLKVGSRVEVIGKGHR-GTVAYVGATLXATGKWVGVILDEAKGKNDGTVQGRKYFTCEE 84
Query: 221 NYGMFVKPGRLTI 233
N+G+FV+ ++ +
Sbjct: 85 NHGIFVRQSQIQV 97
>ZFIN|ZDB-GENE-070117-2205 [details] [associations]
symbol:dctn1a "dynactin 1a" species:7955 "Danio
rerio" [GO:0045176 "apical protein localization" evidence=IMP]
[GO:0040023 "establishment of nucleus localization" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0048663 "neuron fate commitment" evidence=IMP] [GO:0010842
"retina layer formation" evidence=IGI;IMP] [GO:0060219 "camera-type
eye photoreceptor cell differentiation" evidence=IGI]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-070117-2205
GO:GO:0010842 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0040023 GO:GO:0048663
GO:GO:0045176 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 GO:GO:0060219 EMBL:CR926130 EMBL:CT030017
IPI:IPI00960481 Ensembl:ENSDART00000015410 Uniprot:E7F1E0
Length = 1226
Score = 177 (67.4 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 34/75 (45%), Positives = 51/75 (68%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ ++VG ++ R GTV ++G T F+SG WVGV LDE GKN+GTV+ +YF CEE
Sbjct: 8 RPVKVGSVVEVIGKGQR-GTVAYIGATLFASGKWVGVILDEAKGKNDGTVQGKRYFTCEE 66
Query: 221 NYGMFVKPGRLTIGD 235
N+G+FV+ ++ + D
Sbjct: 67 NHGIFVRQSQIQLMD 81
>ZFIN|ZDB-GENE-070521-1 [details] [associations]
symbol:kif13ba "kinesin family member 13Ba"
species:7955 "Danio rerio" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
SMART:SM00240 Pfam:PF01302 ZFIN:ZDB-GENE-070521-1 GO:GO:0005524
GO:GO:0005875 GeneTree:ENSGT00700000104150 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 EMBL:BX005004
IPI:IPI00500739 Ensembl:ENSDART00000026264 Uniprot:F1QK76
Length = 1761
Score = 178 (67.7 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 33/70 (47%), Positives = 48/70 (68%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
++VG R + S + GTV ++G T FS GVWVGV+LD P GKN+G+V+ +YF C +
Sbjct: 1654 LKVGGRVTVGTS--KSGTVRYIGPTHFSEGVWVGVELDTPSGKNDGSVEGHQYFRCNPGF 1711
Query: 223 GMFVKPGRLT 232
G+ V+P RL+
Sbjct: 1712 GVLVRPDRLS 1721
>UNIPROTKB|A8MVD5 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000938
GO:GO:0005737 HOGENOM:HOG000209180 Gene3D:2.30.30.190
SUPFAM:SSF74924 EMBL:AD001527 HOVERGEN:HBG003239 HGNC:HGNC:1989
ChiTaRS:TBCB IPI:IPI00798211 ProteinModelPortal:A8MVD5 SMR:A8MVD5
STRING:A8MVD5 PRIDE:A8MVD5 Ensembl:ENST00000392178
ArrayExpress:A8MVD5 Bgee:A8MVD5 Uniprot:A8MVD5
Length = 214
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 55/203 (27%), Positives = 86/203 (42%)
Query: 16 TVELYITNSKDKHESCXXXXXXXXXXTIGELKQKLELLTGQMSSNMTISLYNRNHDLVSH 75
TV ++I++S + S TI E K KLELL G +S M + LY + S
Sbjct: 10 TVTVFISSSLNTFRS---EKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSK 66
Query: 76 LSDNSMLLGQYPVENEMTLFV---EGNYLTDGLESSET-KYVLPEEKYKEHKENLKNFMM 131
L LLG YPV++ + V G L + + S KY + +E Y + ++ +++F+
Sbjct: 67 LDQEDALLGSYPVDDGCRIHVIDHSGARLGEYEDVSRVEKYTISQEAYDQRQDTVRSFLK 126
Query: 132 KQXXXXXXXXXXXXXXXXXXXXXXXXXI-LKDIEVGKRCKINDS--DVRFGTVMFVGETK 188
+ I VG RC++ + R GTVM+VG
Sbjct: 127 RSKLGRYNEEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGA-- 184
Query: 189 FSSGVWVGVKLDEPFGKNNGTVK 211
+ +G G + P G GTV+
Sbjct: 185 WLAGPVPGSRAPRPGGNVGGTVE 207
>DICTYBASE|DDB_G0280435 [details] [associations]
symbol:dynA "dynactin 150 kDa subunit" species:44689
"Dictyostelium discoideum" [GO:0005813 "centrosome" evidence=TAS]
InterPro:IPR000938 dictyBase:DDB_G0280435 Pfam:PF01302
GO:GO:0005813 GenomeReviews:CM000152_GR EMBL:AAFI02000036
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 KO:K04648 InterPro:IPR022157
Pfam:PF12455 RefSeq:XP_641173.1 ProteinModelPortal:Q54VD6
EnsemblProtists:DDB0220487 GeneID:8622553 KEGG:ddi:DDB_G0280435
InParanoid:Q54VD6 OMA:NEIVEYS Uniprot:Q54VD6
Length = 1539
Score = 177 (67.4 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 161 KDIEVGKRCKINDS-DVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
K + G R IN ++ GTV + G TKFS G WVG++LD GKN+GTV+ +YF+C+
Sbjct: 6 KSLPPGTRVSINGKPELGLGTVKYCGMTKFSPGRWVGIELDSAAGKNDGTVQGERYFDCK 65
Query: 220 ENYGMFVKPGRLTI 233
+G+FVKP I
Sbjct: 66 PAHGLFVKPNMAVI 79
>FB|FBgn0036882 [details] [associations]
symbol:CG9279 species:7227 "Drosophila melanogaster"
[GO:0005869 "dynactin complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] InterPro:IPR000938
Pfam:PF01302 EMBL:AE014296 GO:GO:0005869 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0007018 GeneTree:ENSGT00700000104055
InterPro:IPR022157 Pfam:PF12455 HSSP:Q20728 EMBL:BT003791
RefSeq:NP_730426.1 UniGene:Dm.15136 SMR:Q7JQV2
EnsemblMetazoa:FBtr0074976 EnsemblMetazoa:FBtr0332758 GeneID:40124
KEGG:dme:Dmel_CG9279 UCSC:CG9279-RA FlyBase:FBgn0036882
InParanoid:Q7JQV2 OMA:AINEKFP OrthoDB:EOG4F7M0V GenomeRNAi:40124
NextBio:817117 Uniprot:Q7JQV2
Length = 1339
Score = 175 (66.7 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+++++G+R ++ +++ G V +VG T F++G+W GV LDEP GKNNG+V YF+C
Sbjct: 5 RELKLGQRVEVTGKNLQ-GKVAYVGRTNFAAGLWYGVVLDEPLGKNNGSVHGSIYFKCPT 63
Query: 221 NYGMFVKPGRLT-IGDFP 237
N G+FV+ +L I + P
Sbjct: 64 NCGLFVRAQQLVRIAELP 81
>FB|FBgn0020503 [details] [associations]
symbol:CLIP-190 "Cytoplasmic linker protein 190" species:7227
"Drosophila melanogaster" [GO:0008017 "microtubule binding"
evidence=ISS;IDA] [GO:0005875 "microtubule associated complex"
evidence=ISS;IDA] [GO:0003779 "actin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0007349 "cellularization" evidence=IMP] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0045169 "fusome"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=IDA]
[GO:0051010 "microtubule plus-end binding" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0035371 "microtubule
plus end" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005794 GO:GO:0005875 GO:GO:0003779 GO:GO:0000776
EMBL:AE014134 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007017
GO:GO:0051010 GO:GO:0005876 GO:GO:0007349 GO:GO:0045169
EMBL:AF041382 EMBL:AY118896 EMBL:BT011136 PIR:T13030
RefSeq:NP_001162996.1 RefSeq:NP_609835.2 RefSeq:NP_724047.2
RefSeq:NP_724048.1 UniGene:Dm.3487 ProteinModelPortal:Q9VJE5
SMR:Q9VJE5 DIP:DIP-21005N IntAct:Q9VJE5 MINT:MINT-764195
STRING:Q9VJE5 PaxDb:Q9VJE5 PRIDE:Q9VJE5 EnsemblMetazoa:FBtr0080976
EnsemblMetazoa:FBtr0332456 GeneID:35042 KEGG:dme:Dmel_CG5020
CTD:35042 FlyBase:FBgn0020503 GeneTree:ENSGT00700000104055
InParanoid:Q9VJE5 OMA:REEQNKF OrthoDB:EOG40RXWH PhylomeDB:Q9VJE5
ChiTaRS:CLIP-190 GenomeRNAi:35042 NextBio:791511 Bgee:Q9VJE5
GermOnline:CG5020 Uniprot:Q9VJE5
Length = 1690
Score = 175 (66.7 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 165 VGKRCKINDS-DVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYG 223
VG R ++ R G + ++GET+F+ G W GV+LDEP GKN+GTV D++YFEC+ YG
Sbjct: 239 VGDRVIVSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKPKYG 298
Query: 224 MFVKPGRLTI 233
+FV ++++
Sbjct: 299 VFVPIAKVSL 308
Score = 155 (59.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 165 VGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGM 224
+G+R + + R G + F+G+T F++G W GV LDEP GKN+G V +YF+CE G+
Sbjct: 125 IGQRVWLGGT--RPGQIAFIGDTHFAAGEWAGVVLDEPNGKNDGCVSGKRYFQCEPKRGI 182
Query: 225 FVKPGRLT 232
F + RLT
Sbjct: 183 FSRLTRLT 190
>UNIPROTKB|Q5VT06 [details] [associations]
symbol:CEP350 "Centrosome-associated protein 350"
species:9606 "Homo sapiens" [GO:0005819 "spindle" evidence=IEA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0005819
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 EMBL:AF287356 EMBL:AL645487
EMBL:AL390718 EMBL:AL590632 EMBL:AF387614 IPI:IPI00103595
PIR:T00263 RefSeq:NP_055625.4 UniGene:Hs.413045 PDB:2COZ
PDBsum:2COZ ProteinModelPortal:Q5VT06 SMR:Q5VT06 IntAct:Q5VT06
MINT:MINT-2867672 STRING:Q5VT06 PhosphoSite:Q5VT06 DMDM:74746869
PaxDb:Q5VT06 PRIDE:Q5VT06 Ensembl:ENST00000367607 GeneID:9857
KEGG:hsa:9857 UCSC:uc001gnt.3 CTD:9857 GeneCards:GC01P179923
H-InvDB:HIX0001384 HGNC:HGNC:24238 HPA:HPA028355 HPA:HPA028357
neXtProt:NX_Q5VT06 PharmGKB:PA143485434 HOGENOM:HOG000111528
HOVERGEN:HBG095435 InParanoid:Q5VT06 OMA:WDALSQT OrthoDB:EOG4M0F0T
PhylomeDB:Q5VT06 ChiTaRS:CEP350 EvolutionaryTrace:Q5VT06
GenomeRNAi:9857 NextBio:37150 ArrayExpress:Q5VT06 Bgee:Q5VT06
CleanEx:HS_CEP350 Genevestigator:Q5VT06 GermOnline:ENSG00000135837
Uniprot:Q5VT06
Length = 3117
Score = 172 (65.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 37/89 (41%), Positives = 52/89 (58%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D +G R I + V+ G + F GET F+ G W GV+LD+P G NNGT + YFEC+
Sbjct: 2494 LFDFHIGDRVLIGN--VQPGILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIAYFECK 2551
Query: 220 ENYGMFVKPGRLTIGDFPVLDPFDELDEI 248
E +G+F P + I P + FD+ +I
Sbjct: 2552 EKHGIFAPPQK--ISHIP--ENFDDYVDI 2576
Score = 35 (17.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 88 VENEMTLFVEGNYLTDGLESSETKYVLPEEKYK 120
+ E +L + + D +E + +LP E ++
Sbjct: 1602 IATEYSLKFDESMTEDEIEEQSFRSLLPSESHR 1634
>UNIPROTKB|H0Y7F7 [details] [associations]
symbol:CEP350 "Centrosome-associated protein 350"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 EMBL:AL645487 EMBL:AL390718
EMBL:AL590632 HGNC:HGNC:24238 ChiTaRS:CEP350 EMBL:AL353708
ProteinModelPortal:H0Y7F7 PRIDE:H0Y7F7 Ensembl:ENST00000429851
Bgee:H0Y7F7 Uniprot:H0Y7F7
Length = 1292
Score = 172 (65.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 37/89 (41%), Positives = 52/89 (58%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D +G R I + V+ G + F GET F+ G W GV+LD+P G NNGT + YFEC+
Sbjct: 669 LFDFHIGDRVLIGN--VQPGILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIAYFECK 726
Query: 220 ENYGMFVKPGRLTIGDFPVLDPFDELDEI 248
E +G+F P + I P + FD+ +I
Sbjct: 727 EKHGIFAPPQK--ISHIP--ENFDDYVDI 751
>UNIPROTKB|F1MIC9 [details] [associations]
symbol:DCTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031252 "cell leading edge" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0000922 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 OMA:HVYSRTP EMBL:DAAA02030327 IPI:IPI00718205
UniGene:Bt.4468 Ensembl:ENSBTAT00000006430 ArrayExpress:F1MIC9
Uniprot:F1MIC9
Length = 1239
Score = 171 (65.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 8 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 66
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 67 GHGIFVRQSQIQV 79
>UNIPROTKB|D4A8U7 [details] [associations]
symbol:Dctn1 "Dynactin subunit 1" species:10116 "Rattus
norvegicus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] InterPro:IPR000938 Pfam:PF01302 RGD:62038
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 IPI:IPI00951875 Ensembl:ENSRNOT00000068102
ArrayExpress:D4A8U7 Uniprot:D4A8U7
Length = 1239
Score = 171 (65.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 8 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 66
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 67 GHGIFVRQSQIQV 79
>UNIPROTKB|Q14203 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0003774 "motor activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0030286 "dynein complex" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0007399 "nervous system
development" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000922 "spindle pole" evidence=IDA] [GO:0000776
"kinetochore" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005874 "microtubule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0007067 "mitosis" evidence=NAS] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006987 "activation of signaling protein activity
involved in unfolded protein response" evidence=TAS] [GO:0019886
"antigen processing and presentation of exogenous peptide antigen
via MHC class II" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005829 GO:GO:0005813 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0000086
GO:GO:0007399 GO:GO:0031252 GO:GO:0006987 GO:GO:0000776
GO:GO:0007067 GO:GO:0019886 GO:GO:0008219 GO:GO:0006810
GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
Orphanet:803 GO:GO:0003774 PDB:2HQH PDB:3E2U PDBsum:2HQH
PDBsum:3E2U GO:GO:0005868 CTD:1639 HOVERGEN:HBG004956 KO:K04648
OrthoDB:EOG43TZTR InterPro:IPR022157 Pfam:PF12455 OMA:HVYSRTP
EMBL:AF064205 EMBL:AF064203 EMBL:AF064204 EMBL:AK297286
EMBL:AC005041 EMBL:X98801 EMBL:AF086947 EMBL:AF086927 EMBL:AF086928
EMBL:AF086929 EMBL:AF086930 EMBL:AF086931 EMBL:AF086932
EMBL:AF086933 EMBL:AF086934 EMBL:AF086935 EMBL:AF086936
EMBL:AF086937 EMBL:AF086938 EMBL:AF086939 EMBL:AF086940
EMBL:AF086941 EMBL:AF086942 EMBL:AF086943 EMBL:AF086944
EMBL:AF086945 EMBL:AF086946 EMBL:BT006758 IPI:IPI00219114
IPI:IPI00872359 IPI:IPI00916757 RefSeq:NP_001177766.1
RefSeq:NP_004073.2 RefSeq:NP_075408.1 UniGene:Hs.516111 PDB:1TXQ
PDB:2COY PDB:2HKN PDB:2HKQ PDB:2HL3 PDB:2HL5 PDB:3TQ7 PDBsum:1TXQ
PDBsum:2COY PDBsum:2HKN PDBsum:2HKQ PDBsum:2HL3 PDBsum:2HL5
PDBsum:3TQ7 ProteinModelPortal:Q14203 SMR:Q14203 DIP:DIP-31365N
IntAct:Q14203 MINT:MINT-5004548 STRING:Q14203 PhosphoSite:Q14203
DMDM:17375490 OGP:Q14203 PaxDb:Q14203 PRIDE:Q14203 DNASU:1639
Ensembl:ENST00000361874 Ensembl:ENST00000407639
Ensembl:ENST00000409240 GeneID:1639 KEGG:hsa:1639 UCSC:uc002skv.3
UCSC:uc002skx.3 GeneCards:GC02M074588 H-InvDB:HIX0204314
HGNC:HGNC:2711 HPA:CAB009108 MIM:105400 MIM:168605 MIM:601143
MIM:607641 neXtProt:NX_Q14203 Orphanet:139589 Orphanet:178509
PharmGKB:PA27180 HOGENOM:HOG000015352 PhylomeDB:Q14203
ChiTaRS:DCTN1 EvolutionaryTrace:Q14203 GenomeRNAi:1639 NextBio:6734
PMAP-CutDB:Q14203 ArrayExpress:Q14203 Bgee:Q14203 CleanEx:HS_DCTN1
Genevestigator:Q14203 GermOnline:ENSG00000204843 Uniprot:Q14203
Length = 1278
Score = 171 (65.3 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 25 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 83
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 84 GHGIFVRQSQIQV 96
>RGD|62038 [details] [associations]
symbol:Dctn1 "dynactin 1" species:10116 "Rattus norvegicus"
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0000922 "spindle
pole" evidence=IEA;ISO] [GO:0003777 "microtubule motor activity"
evidence=TAS] [GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005868
"cytoplasmic dynein complex" evidence=IDA] [GO:0005874 "microtubule"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=TAS] [GO:0031252 "cell leading
edge" evidence=IEA;ISO] InterPro:IPR000938 Pfam:PF01302 RGD:62038
GO:GO:0005813 GO:GO:0031252 GO:GO:0000776 GO:GO:0006810
GO:GO:0008017 GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0007017 GO:GO:0003777 GO:GO:0005868 CTD:1639
HOVERGEN:HBG004956 KO:K04648 OrthoDB:EOG43TZTR InterPro:IPR022157
Pfam:PF12455 HOGENOM:HOG000015352 EMBL:X62160 IPI:IPI00196703
PIR:S16129 RefSeq:NP_077044.1 UniGene:Rn.11284
ProteinModelPortal:P28023 SMR:P28023 STRING:P28023
PhosphoSite:P28023 PRIDE:P28023 GeneID:29167 KEGG:rno:29167
UCSC:RGD:62038 InParanoid:P28023 NextBio:608216 PMAP-CutDB:P28023
ArrayExpress:P28023 Genevestigator:P28023
GermOnline:ENSRNOG00000010048 Uniprot:P28023
Length = 1280
Score = 171 (65.3 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 25 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 83
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 84 GHGIFVRQSQIQV 96
>MGI|MGI:107745 [details] [associations]
symbol:Dctn1 "dynactin 1" species:10090 "Mus musculus"
[GO:0000776 "kinetochore" evidence=ISO] [GO:0000922 "spindle pole"
evidence=ISO] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005868 "cytoplasmic dynein
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IDA]
InterPro:IPR000938 MGI:MGI:107745 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0006810 GO:GO:0000922
eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003774
EMBL:AC160400 GeneTree:ENSGT00700000104055 GO:GO:0005868 CTD:1639
HOVERGEN:HBG004956 KO:K04648 InterPro:IPR022157 Pfam:PF12455
OMA:HVYSRTP HOGENOM:HOG000015352 ChiTaRS:DCTN1 EMBL:U60312
EMBL:AK157867 IPI:IPI00115663 IPI:IPI00857569 PIR:JC5368
RefSeq:NP_031861.2 UniGene:Mm.6919 ProteinModelPortal:O08788
SMR:O08788 IntAct:O08788 MINT:MINT-1847327 STRING:O08788
PhosphoSite:O08788 PaxDb:O08788 PRIDE:O08788
Ensembl:ENSMUST00000113918 Ensembl:ENSMUST00000113919 GeneID:13191
KEGG:mmu:13191 InParanoid:O08788 NextBio:283312 Bgee:O08788
CleanEx:MM_DCTN1 Genevestigator:O08788
GermOnline:ENSMUSG00000031865 Uniprot:O08788
Length = 1281
Score = 171 (65.3 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 25 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 83
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 84 GHGIFVRQSQIQV 96
>UNIPROTKB|F1SNT8 [details] [associations]
symbol:DCTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031252 "cell leading edge" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0000922 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 OMA:HVYSRTP EMBL:CU468647 Ensembl:ENSSSCT00000009061
Uniprot:F1SNT8
Length = 1286
Score = 171 (65.3 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEE 220
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C+E
Sbjct: 25 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDE 83
Query: 221 NYGMFVKPGRLTI 233
+G+FV+ ++ +
Sbjct: 84 GHGIFVRQSQIQV 96
>UNIPROTKB|F1REW5 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051010 "microtubule plus-end binding" evidence=IEA]
[GO:0044354 "macropinosome" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000938 InterPro:IPR001878
SMART:SM00343 Pfam:PF01302 GO:GO:0005813 GO:GO:0008270
GO:GO:0003676 GO:GO:0044354 GO:GO:0001578 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:FP565737 OMA:DSKQTNE
Ensembl:ENSSSCT00000010735 Uniprot:F1REW5
Length = 1204
Score = 170 (64.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPV 238
G V F+GET F+ G W GV+LDEP GKN+G V +YF+C+ YG+F ++T FP
Sbjct: 7 GVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPS 66
Query: 239 LDP 241
P
Sbjct: 67 TTP 69
>UNIPROTKB|F1PIS8 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 EMBL:AAEX03014334
Ensembl:ENSCAFT00000013047 Uniprot:F1PIS8
Length = 1777
Score = 160 (61.4 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 177 RFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRL 231
+ G V ++G T F G W+GV+LD P GKN+G++ +YF+C YG+ V+PGR+
Sbjct: 1658 KMGIVRYIGPTDFQEGTWIGVELDLPSGKNDGSIGGKQYFKCNPGYGLLVRPGRV 1712
Score = 37 (18.1 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 67 NRNHDLVSHLSDNSMLLGQY 86
N D + HLS+ ++ + Y
Sbjct: 879 NITEDFIEHLSEGALAIEVY 898
>CGD|CAL0005838 [details] [associations]
symbol:NIP100 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0005869 "dynactin
complex" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0000235 "astral
microtubule" evidence=IEA] InterPro:IPR000938 CGD:CAL0005838
Pfam:PF01302 GO:GO:0000132 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:AACQ01000055 EMBL:AACQ01000054 RefSeq:XP_717349.1
RefSeq:XP_717438.1 ProteinModelPortal:Q5A6R8 GeneID:3640863
GeneID:3640970 KEGG:cal:CaO19.486 KEGG:cal:CaO19.8116
Uniprot:Q5A6R8
Length = 895
Score = 165 (63.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 32/72 (44%), Positives = 51/72 (70%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN-- 221
E+G+ + + D+ G++ ++G TKF+ GVW G++L +P GKNNG+V+ VKYF+C+E+
Sbjct: 4 EIGQSVVVKN-DI--GSIKYIGTTKFAPGVWYGIELLQPKGKNNGSVQGVKYFDCKEDDN 60
Query: 222 --YGMFVKPGRL 231
YG+FVK L
Sbjct: 61 GFYGIFVKGSML 72
>UNIPROTKB|Q5A6R8 [details] [associations]
symbol:NIP100 "Putative uncharacterized protein NIP100"
species:237561 "Candida albicans SC5314" [GO:0000132 "establishment
of mitotic spindle orientation" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000938 CGD:CAL0005838
Pfam:PF01302 GO:GO:0000132 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:AACQ01000055 EMBL:AACQ01000054 RefSeq:XP_717349.1
RefSeq:XP_717438.1 ProteinModelPortal:Q5A6R8 GeneID:3640863
GeneID:3640970 KEGG:cal:CaO19.486 KEGG:cal:CaO19.8116
Uniprot:Q5A6R8
Length = 895
Score = 165 (63.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 32/72 (44%), Positives = 51/72 (70%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEEN-- 221
E+G+ + + D+ G++ ++G TKF+ GVW G++L +P GKNNG+V+ VKYF+C+E+
Sbjct: 4 EIGQSVVVKN-DI--GSIKYIGTTKFAPGVWYGIELLQPKGKNNGSVQGVKYFDCKEDDN 60
Query: 222 --YGMFVKPGRL 231
YG+FVK L
Sbjct: 61 GFYGIFVKGSML 72
>UNIPROTKB|F1PIS5 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 OMA:MQSILNS
EMBL:AAEX03014334 Ensembl:ENSCAFT00000013053 Uniprot:F1PIS5
Length = 1984
Score = 160 (61.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 177 RFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRL 231
+ G V ++G T F G W+GV+LD P GKN+G++ +YF+C YG+ V+PGR+
Sbjct: 1865 KMGIVRYIGPTDFQEGTWIGVELDLPSGKNDGSIGGKQYFKCNPGYGLLVRPGRV 1919
Score = 37 (18.1 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 67 NRNHDLVSHLSDNSMLLGQY 86
N D + HLS+ ++ + Y
Sbjct: 990 NITEDFIEHLSEGALAIEVY 1009
>UNIPROTKB|E1BC48 [details] [associations]
symbol:CEP350 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 OMA:WDALSQT
GeneTree:ENSGT00700000104543 EMBL:DAAA02043478 EMBL:DAAA02043479
EMBL:DAAA02043480 EMBL:DAAA02043481 EMBL:DAAA02043482
EMBL:DAAA02043483 IPI:IPI00687757 Ensembl:ENSBTAT00000010631
ArrayExpress:E1BC48 Uniprot:E1BC48
Length = 3127
Score = 164 (62.8 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D +G R I + V+ GT+ F G T F+ G W GV+LD+P G NNGT + YF C+
Sbjct: 2505 LLDFHIGDRVLIGN--VQPGTLRFKGVTSFAKGFWAGVELDKPEGNNNGTYDGIVYFVCK 2562
Query: 220 ENYGMFVKPGRLTIGDFPVLDPFDELDEI 248
E +G+F P + I P + FD+ +I
Sbjct: 2563 EKHGIFAPPQK--ISHIP--ENFDDYVDI 2587
Score = 36 (17.7 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 88 VENEMTLFVEGNYLTDGLESSETKYVLPEEKYK 120
V E +L + + D +E + +LP E ++
Sbjct: 1612 VATEYSLKFDESMTEDEIEEKSFRSLLPSESHR 1644
>UNIPROTKB|F1RJP9 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 OMA:MQSILNS
EMBL:CT737202 EMBL:CT954336 Ensembl:ENSSSCT00000010618
Uniprot:F1RJP9
Length = 1851
Score = 160 (61.4 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRL 231
G V +VG T F G WVGV+LD P GKN+G++ +YF+C YG+ V+PGR+
Sbjct: 1732 GIVRYVGPTDFQEGTWVGVELDLPSGKNDGSIGGKQYFKCNPGYGLLVRPGRV 1784
Score = 35 (17.4 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 59 SNMTISLYNRNHDLVSHLSDNSMLLGQY 86
S ++S+ D + HLS+ ++ + Y
Sbjct: 914 SEFSVSI---TEDFIEHLSEGALAIEVY 938
>UNIPROTKB|E1BGB0 [details] [associations]
symbol:KIF13B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 OMA:MQSILNS
EMBL:DAAA02021955 EMBL:DAAA02021956 IPI:IPI00825744
Ensembl:ENSBTAT00000022902 Uniprot:E1BGB0
Length = 1878
Score = 160 (61.4 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRL 231
G V +VG T F G WVGV+LD P GKN+G++ +YF+C YG+ V+PGR+
Sbjct: 1759 GIVRYVGPTDFQEGTWVGVELDLPSGKNDGSIGGKQYFKCNPGYGLLVRPGRV 1811
Score = 35 (17.4 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 59 SNMTISLYNRNHDLVSHLSDNSMLLGQY 86
S ++S+ D + HLS+ ++ + Y
Sbjct: 914 SEFSVSI---TEDFIEHLSEGALAIEVY 938
>UNIPROTKB|G4NH27 [details] [associations]
symbol:MGG_03960 "Dynactin ro-3" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:CM001236 KO:K04648 InterPro:IPR022157 Pfam:PF12455
RefSeq:XP_003719904.1 ProteinModelPortal:G4NH27
EnsemblFungi:MGG_03960T0 GeneID:2677322 KEGG:mgr:MGG_03960
Uniprot:G4NH27
Length = 1389
Score = 165 (63.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 174 SDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTI 233
SD R V F+G T F+ G W+GV+L + GKN+G+V+ +YF+C+ N+GMFV+P + I
Sbjct: 14 SDGRIAIVRFIGRTGFAQGDWLGVELPDDSGKNDGSVQGERYFDCDSNHGMFVRPSTVCI 73
Query: 234 GD 235
D
Sbjct: 74 LD 75
>ASPGD|ASPL0000000137 [details] [associations]
symbol:nudM species:162425 "Emericella nidulans"
[GO:0051010 "microtubule plus-end binding" evidence=IDA]
[GO:0005869 "dynactin complex" evidence=IDA] [GO:0007097 "nuclear
migration" evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 EMBL:AACD01000107 EMBL:BN001301 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 KO:K04648 InterPro:IPR022157 Pfam:PF12455
OrthoDB:EOG4ZGSMC RefSeq:XP_663927.1 ProteinModelPortal:Q5AZF7
EnsemblFungi:CADANIAT00006664 GeneID:2870972 KEGG:ani:AN6323.2
HOGENOM:HOG000165508 OMA:ATAREMD Uniprot:Q5AZF7
Length = 1267
Score = 164 (62.8 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 31/86 (36%), Positives = 50/86 (58%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
+ ++ +G + D R TV F+G T F+ G W+GV+L + GKN+G+V+ +YF+CE
Sbjct: 1 MAELTIGSVIALTDG--RQATVRFIGATSFADGEWIGVELTDDTGKNDGSVQGERYFDCE 58
Query: 220 ENYGMFVKPGRLTIGDFPVLDPFDEL 245
+GMFV+P + P P +L
Sbjct: 59 PGFGMFVRP--TAVASTPSKSPTKQL 82
>UNIPROTKB|E2RBT3 [details] [associations]
symbol:CEP350 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005813 "centrosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 OMA:WDALSQT
GeneTree:ENSGT00700000104543 EMBL:AAEX03005114
Ensembl:ENSCAFT00000020139 Uniprot:E2RBT3
Length = 3118
Score = 157 (60.3 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 35/89 (39%), Positives = 50/89 (56%)
Query: 160 LKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE 219
L D +G R I + V+ GT+ F G T F+ G W GV+LD+ G NNGT + YF C+
Sbjct: 2497 LHDFHIGDRVLIGN--VQPGTLRFKGVTSFAKGFWAGVELDKAEGNNNGTYDGIVYFVCK 2554
Query: 220 ENYGMFVKPGRLTIGDFPVLDPFDELDEI 248
E +G+F P + I P + FD+ +I
Sbjct: 2555 EKHGIFAPPQK--ISHIP--ENFDDYVDI 2579
Score = 36 (17.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 88 VENEMTLFVEGNYLTDGLESSETKYVLPEEKYK 120
V E +L + + D +E + +LP E ++
Sbjct: 1608 VATEYSLKFDESMTEDEIEEKSFRSLLPSESHR 1640
>UNIPROTKB|Q96DZ5 [details] [associations]
symbol:CLIP3 "CAP-Gly domain-containing linker protein 3"
species:9606 "Homo sapiens" [GO:0005795 "Golgi stack" evidence=IEA]
[GO:0032588 "trans-Golgi network membrane" evidence=IMP;IDA]
[GO:0005886 "plasma membrane" evidence=IDA;IMP] [GO:0008017
"microtubule binding" evidence=IMP;IDA] [GO:0031115 "negative
regulation of microtubule polymerization" evidence=IMP] [GO:0035594
"ganglioside binding" evidence=IDA] [GO:0045807 "positive
regulation of endocytosis" evidence=IMP] [GO:0031901 "early
endosome membrane" evidence=IDA] [GO:0055038 "recycling endosome
membrane" evidence=IDA] [GO:0044091 "membrane biogenesis"
evidence=IMP] [GO:0045121 "membrane raft" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0010828 "positive regulation of glucose transport"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=IMP] [GO:0072321 "chaperone-mediated protein transport"
evidence=IMP] [GO:0005802 "trans-Golgi network" evidence=ISS]
InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248
Pfam:PF01302 GO:GO:0005886 GO:GO:0031901 GO:GO:0032588
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005795 GO:GO:0045121 GO:GO:0043065
GO:GO:0045807 GO:GO:0001934 GO:GO:0008017 GO:GO:0090004
GO:GO:0045444 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115
GO:GO:0010828 GO:GO:0055038 EMBL:AJ427922 EMBL:AK094738
EMBL:AK289509 EMBL:BC013116 EMBL:BC014486 EMBL:AL117468
IPI:IPI00103362 PIR:T17253 RefSeq:NP_001186499.1 RefSeq:NP_056341.1
UniGene:Hs.466539 PDB:2CP0 PDBsum:2CP0 ProteinModelPortal:Q96DZ5
SMR:Q96DZ5 STRING:Q96DZ5 PhosphoSite:Q96DZ5 DMDM:116241302
PaxDb:Q96DZ5 PRIDE:Q96DZ5 Ensembl:ENST00000360535 GeneID:25999
KEGG:hsa:25999 UCSC:uc002ocz.2 CTD:25999 GeneCards:GC19M036505
H-InvDB:HIX0040341 HGNC:HGNC:24314 HPA:HPA041429 MIM:607382
neXtProt:NX_Q96DZ5 PharmGKB:PA162382439 HOGENOM:HOG000007206
HOVERGEN:HBG057079 InParanoid:Q96DZ5 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ PhylomeDB:Q96DZ5 EvolutionaryTrace:Q96DZ5
GenomeRNAi:25999 NextBio:47718 ArrayExpress:Q96DZ5 Bgee:Q96DZ5
CleanEx:HS_CLIP3 Genevestigator:Q96DZ5 GermOnline:ENSG00000105270
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
Uniprot:Q96DZ5
Length = 547
Score = 153 (58.9 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+ +G R ++ + GT+ F G T+F+SG WVGV+LDEP GKN+G+V V+YF C
Sbjct: 294 LRLGDRVLLDGQ--KTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 351
Query: 223 GMFVKPGRLT 232
G+F +++
Sbjct: 352 GLFASVSKIS 361
Score = 138 (53.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYG 223
EVG + + + + G V F G+T F+ G W G++LD+P GK++G+V V+YF C +G
Sbjct: 417 EVGDQVLV--AGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHG 474
Query: 224 MFVKPGRL 231
+F R+
Sbjct: 475 VFAPASRI 482
Score = 35 (17.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 60 NMTISLYNRNHDLVSHLSDNSMLLG 84
N T S +N H H++ +S+ LG
Sbjct: 190 NSTCSDFN--HGSALHIAASSLCLG 212
>UNIPROTKB|Q5R686 [details] [associations]
symbol:CLIP3 "CAP-Gly domain-containing linker protein 3"
species:9601 "Pongo abelii" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005802 "trans-Golgi
network" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0010828
"positive regulation of glucose transport" evidence=ISS]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=ISS]
[GO:0031115 "negative regulation of microtubule polymerization"
evidence=ISS] [GO:0031901 "early endosome membrane" evidence=ISS]
[GO:0032588 "trans-Golgi network membrane" evidence=ISS]
[GO:0035594 "ganglioside binding" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0044091 "membrane biogenesis" evidence=ISS] [GO:0045121
"membrane raft" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045807 "positive regulation of
endocytosis" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 Pfam:PF01302 GO:GO:0005886 GO:GO:0031901
GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005795 GO:GO:0045121
GO:GO:0043065 GO:GO:0045807 GO:GO:0001934 GO:GO:0008017
GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115
GO:GO:0010828 GO:GO:0055038 CTD:25999 HOVERGEN:HBG057079 KO:K10423
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:CR860608 RefSeq:NP_001126592.1 UniGene:Pab.1232
ProteinModelPortal:Q5R686 SMR:Q5R686 GeneID:100173588
KEGG:pon:100173588 InParanoid:Q5R686 Uniprot:Q5R686
Length = 547
Score = 153 (58.9 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+ +G R ++ + GT+ F G T+F+SG WVGV+LDEP GKN+G+V V+YF C
Sbjct: 294 LRLGDRVLLDGQ--KTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 351
Query: 223 GMFVKPGRLT 232
G+F +++
Sbjct: 352 GLFASVSKIS 361
Score = 138 (53.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYG 223
EVG + + + + G V F G+T F+ G W G++LD+P GK++G+V V+YF C +G
Sbjct: 417 EVGDQVLV--AGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHG 474
Query: 224 MFVKPGRL 231
+F R+
Sbjct: 475 VFAPASRI 482
Score = 35 (17.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 60 NMTISLYNRNHDLVSHLSDNSMLLG 84
N T S +N H H++ +S+ LG
Sbjct: 190 NSTCSDFN--HGSALHIAASSLCLG 212
>UNIPROTKB|D2HFU1 [details] [associations]
symbol:PANDA_009788 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0010828 "positive regulation of glucose transport"
evidence=ISS] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=ISS] [GO:0031115 "negative regulation of microtubule
polymerization" evidence=ISS] [GO:0031901 "early endosome membrane"
evidence=ISS] [GO:0032588 "trans-Golgi network membrane"
evidence=ISS] [GO:0035594 "ganglioside binding" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0044091 "membrane biogenesis" evidence=ISS]
[GO:0045121 "membrane raft" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045807 "positive regulation of
endocytosis" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 Pfam:PF01302 GO:GO:0005886 GO:GO:0031901
GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045121 GO:GO:0043065
GO:GO:0045807 GO:GO:0001934 GO:GO:0008017 GO:GO:0090004
GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828
GO:GO:0055038 HOGENOM:HOG000007206 GO:GO:0035594 GO:GO:0072321
GO:GO:0044091 GO:GO:0018230 EMBL:GL192794 Uniprot:D2HFU1
Length = 504
Score = 155 (59.6 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+ +G R ++ + GT+ F G T+F+SG WVGV+LDEP GKN+G+V V+YF C
Sbjct: 293 LRLGDRVLLDGQ--KTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 350
Query: 223 GMFVKPGRLT-IGDFP 237
G+F +++ + D P
Sbjct: 351 GLFASVSKISKVVDAP 366
Score = 138 (53.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYG 223
EVG + + + + G V F G+T F+ G W G++LD+P GK++G+V V+YF C +G
Sbjct: 416 EVGDQVLV--AGQKQGIVRFFGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHG 473
Query: 224 MFVKPGRL 231
+F R+
Sbjct: 474 VFAPASRI 481
>UNIPROTKB|F1LRB4 [details] [associations]
symbol:Kif13b "Protein Kif13b" species:10116 "Rattus
norvegicus" [GO:0003777 "microtubule motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 Pfam:PF01302 RGD:1303307
GO:GO:0005524 GO:GO:0005875 GeneTree:ENSGT00700000104150
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 IPI:IPI00417373
Ensembl:ENSRNOT00000029757 ArrayExpress:F1LRB4 Uniprot:F1LRB4
Length = 1753
Score = 157 (60.3 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRL 231
G V ++G T F G W+GV+LD P GKN+G++ +YF C YG+ V+PGR+
Sbjct: 1641 GIVRYIGPTDFQEGTWIGVELDLPAGKNDGSIGGKQYFRCNPGYGLLVRPGRV 1693
>RGD|1303307 [details] [associations]
symbol:Kif13b "kinesin family member 13B" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0050770 "regulation of axonogenesis"
evidence=ISO] [GO:0071889 "14-3-3 protein binding" evidence=ISO]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
Pfam:PF01302 RGD:1303307 GO:GO:0005524 GO:GO:0005875
Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG5244 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
HOVERGEN:HBG052244 KO:K10392 InterPro:IPR022140 InterPro:IPR022164
Pfam:PF12473 Pfam:PF12423 HOGENOM:HOG000230729 CTD:23303
IPI:IPI00417373 EMBL:AJ605719 RefSeq:NP_998791.1 UniGene:Rn.212960
ProteinModelPortal:Q70AM4 SMR:Q70AM4 STRING:Q70AM4
PhosphoSite:Q70AM4 PRIDE:Q70AM4 GeneID:305967 KEGG:rno:305967
UCSC:RGD:1303307 InParanoid:Q70AM4 NextBio:655327
ArrayExpress:Q70AM4 Genevestigator:Q70AM4 Uniprot:Q70AM4
Length = 1767
Score = 157 (60.3 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRL 231
G V ++G T F G W+GV+LD P GKN+G++ +YF C YG+ V+PGR+
Sbjct: 1655 GIVRYIGPTDFQEGTWIGVELDLPAGKNDGSIGGKQYFRCNPGYGLLVRPGRV 1707
>UNIPROTKB|D4A996 [details] [associations]
symbol:Kif13b "Protein Kif13b" species:10116 "Rattus
norvegicus" [GO:0003777 "microtubule motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 Pfam:PF01302 RGD:1303307
GO:GO:0005524 GO:GO:0005875 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003777 GO:GO:0007018
Gene3D:3.40.850.10 InterPro:IPR022140 InterPro:IPR022164
Pfam:PF12473 Pfam:PF12423 OrthoDB:EOG4BG8V6 IPI:IPI00949029
PRIDE:D4A996 Ensembl:ENSRNOT00000068423 ArrayExpress:D4A996
Uniprot:D4A996
Length = 1827
Score = 157 (60.3 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRL 231
G V ++G T F G W+GV+LD P GKN+G++ +YF C YG+ V+PGR+
Sbjct: 1715 GIVRYIGPTDFQEGTWIGVELDLPAGKNDGSIGGKQYFRCNPGYGLLVRPGRV 1767
>UNIPROTKB|C9J1B7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916125 ProteinModelPortal:C9J1B7 SMR:C9J1B7 STRING:C9J1B7
Ensembl:ENST00000440727 ArrayExpress:C9J1B7 Bgee:C9J1B7
Uniprot:C9J1B7
Length = 64
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 161 KDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFEC 218
+ + VG R ++ R GTV +VG T F++G WVGV LDE GKN+GTV+ KYF C
Sbjct: 8 RPLRVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC 64
>UNIPROTKB|I3LGS7 [details] [associations]
symbol:CLIP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090004 "positive regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0072321
"chaperone-mediated protein transport" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0045807 "positive
regulation of endocytosis" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0044091 "membrane biogenesis" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035594 "ganglioside binding" evidence=IEA]
[GO:0032588 "trans-Golgi network membrane" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0031115
"negative regulation of microtubule polymerization" evidence=IEA]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=IEA]
[GO:0010828 "positive regulation of glucose transport"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000938 SMART:SM00248 Pfam:PF01302
GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045121
GO:GO:0043065 GO:GO:0045807 GO:GO:0001934 GO:GO:0090004
GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828
GO:GO:0055038 GeneTree:ENSGT00700000104055 OMA:DNVGAKK
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:CU694686 Ensembl:ENSSSCT00000022327 Uniprot:I3LGS7
Length = 551
Score = 154 (59.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 171 INDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGR 230
++ S GT+ F G T+F+SG WVGV+LDEP GKN+G+V V+YF C G+F +
Sbjct: 304 LSQSQKTTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFASVSK 363
Query: 231 LT 232
++
Sbjct: 364 IS 365
Score = 137 (53.3 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYG 223
EVG + + + + G V F G+T F+ G W G++LD+P GK++G++ V+YF C +G
Sbjct: 421 EVGDQVLV--AGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSIFGVRYFTCPPKHG 478
Query: 224 MFVKPGRL 231
+F R+
Sbjct: 479 VFAPASRI 486
>UNIPROTKB|E1BAL0 [details] [associations]
symbol:CLIP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0045121 "membrane raft" evidence=ISS]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=ISS]
[GO:0090004 "positive regulation of establishment of protein
localization to plasma membrane" evidence=ISS] [GO:0045444 "fat
cell differentiation" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0010828
"positive regulation of glucose transport" evidence=ISS]
[GO:0035594 "ganglioside binding" evidence=ISS] [GO:0072321
"chaperone-mediated protein transport" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0032588 "trans-Golgi network membrane" evidence=ISS]
[GO:0031901 "early endosome membrane" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0045807 "positive
regulation of endocytosis" evidence=ISS] [GO:0044091 "membrane
biogenesis" evidence=ISS] [GO:0031115 "negative regulation of
microtubule polymerization" evidence=ISS] InterPro:IPR002110
InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248 Pfam:PF01302
GO:GO:0005886 GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0031115 GO:GO:0010828 GO:GO:0055038
GeneTree:ENSGT00700000104055 CTD:25999 KO:K10423 OMA:DNVGAKK
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:DAAA02046954 IPI:IPI00686311 RefSeq:NP_001192827.1
UniGene:Bt.56647 PRIDE:E1BAL0 Ensembl:ENSBTAT00000026221
GeneID:522965 KEGG:bta:522965 NextBio:20873637 Uniprot:E1BAL0
Length = 547
Score = 153 (58.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+ +G R ++ + GT+ F G T+F+SG WVGV+LDEP GKN+G+V V+YF C
Sbjct: 294 LRLGDRVLLDGQ--KTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 351
Query: 223 GMFVKPGRLT 232
G+F +++
Sbjct: 352 GLFASVSKIS 361
Score = 138 (53.6 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYG 223
EVG + + + + G V F G+T F+ G W G++LD+P GK++G+V V+YF C +G
Sbjct: 417 EVGDQVLV--AGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPKHG 474
Query: 224 MFVKPGRL 231
+F R+
Sbjct: 475 VFAPASRI 482
>MGI|MGI:1923936 [details] [associations]
symbol:Clip3 "CAP-GLY domain containing linker protein 3"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0010828 "positive regulation of glucose transport"
evidence=IMP] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=ISO] [GO:0031115 "negative regulation of microtubule
polymerization" evidence=ISO] [GO:0031901 "early endosome membrane"
evidence=ISO] [GO:0032588 "trans-Golgi network membrane"
evidence=ISO] [GO:0035594 "ganglioside binding" evidence=ISO]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0044091 "membrane biogenesis" evidence=ISO]
[GO:0045121 "membrane raft" evidence=ISO] [GO:0045807 "positive
regulation of endocytosis" evidence=ISO] [GO:0055038 "recycling
endosome membrane" evidence=ISO] [GO:0072321 "chaperone-mediated
protein transport" evidence=ISO] [GO:0090004 "positive regulation
of establishment of protein localization to plasma membrane"
evidence=IDA] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 MGI:MGI:1923936 Pfam:PF01302 GO:GO:0005886
GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005795
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828 GO:GO:0055038
EMBL:CH466593 GeneTree:ENSGT00700000104055 CTD:25999
HOGENOM:HOG000007206 HOVERGEN:HBG057079 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ GO:GO:0035594 GO:GO:0072321 GO:GO:0044091
GO:GO:0018230 EMBL:AC149067 EMBL:BC056173 EMBL:BC138413
EMBL:AK005167 IPI:IPI00265407 RefSeq:NP_001074583.1
UniGene:Mm.159258 PDB:1WHH PDBsum:1WHH ProteinModelPortal:B9EHT4
SMR:B9EHT4 PRIDE:B9EHT4 Ensembl:ENSMUST00000014065 GeneID:76686
KEGG:mmu:76686 UCSC:uc009gea.1 ChiTaRS:CLIP3
EvolutionaryTrace:Q9DB67 NextBio:345627 Bgee:B9EHT4
Genevestigator:B9EHT4 Uniprot:B9EHT4
Length = 547
Score = 152 (58.6 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+ +G R ++ + GT+ F G T+F+SG WVGV+LDEP GKN+G+V V+YF C
Sbjct: 294 LRLGDRVLLDGQ--KTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 351
Query: 223 GMFVKPGRLT 232
G+F +++
Sbjct: 352 GLFASVSKVS 361
Score = 138 (53.6 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYG 223
EVG + + + + G V F G+T F+ G W G++LD+P GK++G+V V+YF C +G
Sbjct: 417 EVGDQVLV--AGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCAPRHG 474
Query: 224 MFVKPGRL 231
+F R+
Sbjct: 475 VFAPASRI 482
>RGD|1306245 [details] [associations]
symbol:Clip3 "CAP-GLY domain containing linker protein 3"
species:10116 "Rattus norvegicus" [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISO;ISS] [GO:0005802
"trans-Golgi network" evidence=ISO;ISS] [GO:0005886 "plasma
membrane" evidence=ISO;ISS] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0010828 "positive regulation of glucose
transport" evidence=ISO;ISS] [GO:0018230 "peptidyl-L-cysteine
S-palmitoylation" evidence=ISO;ISS] [GO:0031115 "negative
regulation of microtubule polymerization" evidence=ISO;ISS]
[GO:0031901 "early endosome membrane" evidence=ISO;ISS] [GO:0032588
"trans-Golgi network membrane" evidence=ISO;ISS] [GO:0035594
"ganglioside binding" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0044091
"membrane biogenesis" evidence=ISO;ISS] [GO:0045121 "membrane raft"
evidence=ISO;ISS] [GO:0045444 "fat cell differentiation"
evidence=ISS] [GO:0045807 "positive regulation of endocytosis"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISO;ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISO;ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISO;ISS] InterPro:IPR002110 InterPro:IPR000938
PROSITE:PS50088 SMART:SM00248 Pfam:PF01302 RGD:1306245
GO:GO:0005886 GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0031115 GO:GO:0010828 GO:GO:0055038 EMBL:CH473979
GeneTree:ENSGT00700000104055 CTD:25999 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ GO:GO:0035594 GO:GO:0072321 GO:GO:0044091
GO:GO:0018230 IPI:IPI00367085 RefSeq:NP_001100971.1
RefSeq:XP_003748868.1 UniGene:Rn.136605 SMR:D4A507
Ensembl:ENSRNOT00000028247 GeneID:100911911 GeneID:308493
KEGG:rno:100911911 KEGG:rno:308493 UCSC:RGD:1306245 NextBio:659004
Uniprot:D4A507
Length = 547
Score = 152 (58.6 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 163 IEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENY 222
+ +G R ++ + GT+ F G T+F+SG WVGV+LDEP GKN+G+V V+YF C
Sbjct: 294 LRLGDRVLLDGQ--KTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQ 351
Query: 223 GMFVKPGRLT 232
G+F +++
Sbjct: 352 GLFASVSKVS 361
Score = 138 (53.6 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 164 EVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYG 223
EVG + + + + G V F G+T F+ G W G++LD+P GK++G+V V+YF C +G
Sbjct: 417 EVGDQVLV--AGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCAPRHG 474
Query: 224 MFVKPGRL 231
+F R+
Sbjct: 475 VFAPASRI 482
>UNIPROTKB|F5H270 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0035371 "microtubule plus end" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 GO:GO:0005881 HGNC:HGNC:10461 ChiTaRS:CLIP1
EMBL:AC048338 EMBL:AC127002 EMBL:AC079406 EMBL:AC093016
IPI:IPI01010481 ProteinModelPortal:F5H270 SMR:F5H270
Ensembl:ENST00000535290 ArrayExpress:F5H270 Bgee:F5H270
Uniprot:F5H270
Length = 108
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 162 DIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKY 215
D VG+R +N + + G + F+GET+F+ G W G+ LDEP GKN+G+V V+Y
Sbjct: 57 DFRVGERVWVNGN--KPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRY 108
>UNIPROTKB|F8VPJ2 [details] [associations]
symbol:KIF13B "Kinesin-like protein KIF13B" species:9606
"Homo sapiens" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 SMART:SM00129 SMART:SM00240 Pfam:PF01302
GO:GO:0005524 GO:GO:0005875 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003777 GO:GO:0007018
Gene3D:3.40.850.10 EMBL:AC084262 KO:K10392 InterPro:IPR022140
InterPro:IPR022164 Pfam:PF12473 Pfam:PF12423 IPI:IPI00021753
RefSeq:NP_056069.2 UniGene:Hs.444767 GeneID:23303 KEGG:hsa:23303
CTD:23303 HGNC:HGNC:14405 ChiTaRS:KIF13B GenomeRNAi:23303
NextBio:45145 EMBL:AC108449 EMBL:AC103830 ProteinModelPortal:F8VPJ2
SMR:F8VPJ2 PRIDE:F8VPJ2 Ensembl:ENST00000524189 UCSC:uc003xhh.4
OMA:MQSILNS ArrayExpress:F8VPJ2 Bgee:F8VPJ2 Uniprot:F8VPJ2
Length = 1826
Score = 152 (58.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPV 238
G V +VG F G WVGV+LD P GKN+G++ +YF C YG+ V+P R+ PV
Sbjct: 1715 GVVRYVGPADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGLLVRPSRVRRATGPV 1774
Score = 37 (18.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 67 NRNHDLVSHLSDNSMLLGQY 86
N D + HLS+ ++ + Y
Sbjct: 933 NITEDFIEHLSEGALAIEVY 952
>UNIPROTKB|Q9NQT8 [details] [associations]
symbol:KIF13B "Kinesin-like protein KIF13B" species:9606
"Homo sapiens" [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007018 "microtubule-based movement"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0006605 "protein
targeting" evidence=TAS] [GO:0042110 "T cell activation"
evidence=NAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0050770 "regulation of axonogenesis" evidence=IDA] [GO:0071889
"14-3-3 protein binding" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] InterPro:IPR000253 InterPro:IPR000938
InterPro:IPR001752 InterPro:IPR008984 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00498 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50006 PROSITE:PS50067 SMART:SM00129 SMART:SM00240
Pfam:PF01302 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0005875 GO:GO:0007165 GO:GO:0030424 Gene3D:2.60.200.20
SUPFAM:SSF49879 Pathway_Interaction_DB:arf6cyclingpathway
GO:GO:0050770 GO:GO:0042110 PDB:3FM8 PDB:3MDB PDBsum:3FM8
PDBsum:3MDB eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0003777 GO:GO:0007018 GO:GO:0071889 Gene3D:3.40.850.10
HOVERGEN:HBG052244 KO:K10392 InterPro:IPR022140 InterPro:IPR022164
Pfam:PF12473 Pfam:PF12423 HOGENOM:HOG000230729 EMBL:AF279865
EMBL:AB014539 EMBL:AL583912 IPI:IPI00021753 RefSeq:NP_056069.2
UniGene:Hs.444767 PDB:2COW PDB:3GBJ PDBsum:2COW PDBsum:3GBJ
ProteinModelPortal:Q9NQT8 SMR:Q9NQT8 DIP:DIP-34586N IntAct:Q9NQT8
STRING:Q9NQT8 PhosphoSite:Q9NQT8 DMDM:23396625 PaxDb:Q9NQT8
PRIDE:Q9NQT8 GeneID:23303 KEGG:hsa:23303 CTD:23303
GeneCards:GC08M028924 H-InvDB:HIX0021580 HGNC:HGNC:14405
HPA:HPA025023 MIM:607350 neXtProt:NX_Q9NQT8 PharmGKB:PA30099
OrthoDB:EOG4BG8V6 ChiTaRS:KIF13B EvolutionaryTrace:Q9NQT8
GenomeRNAi:23303 NextBio:45145 CleanEx:HS_KIF13B
Genevestigator:Q9NQT8 GermOnline:ENSG00000197892 Uniprot:Q9NQT8
Length = 1826
Score = 152 (58.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVKPGRLTIGDFPV 238
G V +VG F G WVGV+LD P GKN+G++ +YF C YG+ V+P R+ PV
Sbjct: 1715 GVVRYVGPADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGLLVRPSRVRRATGPV 1774
Score = 37 (18.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 67 NRNHDLVSHLSDNSMLLGQY 86
N D + HLS+ ++ + Y
Sbjct: 933 NITEDFIEHLSEGALAIEVY 952
>POMBASE|SPAC27D7.13c [details] [associations]
symbol:ssm4 "dynactin microtubule-binding subunit,
p150-Glued Ssm4" species:4896 "Schizosaccharomyces pombe"
[GO:0000743 "nuclear migration involved in conjugation with
cellular fusion" evidence=IMP] [GO:0000753 "cell morphogenesis
involved in conjugation with cellular fusion" evidence=IGI;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005816 "spindle
pole body" evidence=IDA] [GO:0005869 "dynactin complex"
evidence=ISO] [GO:0005881 "cytoplasmic microtubule" evidence=IDA]
[GO:0007127 "meiosis I" evidence=IGI] [GO:0007129 "synapsis"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISM]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0030437
"ascospore formation" evidence=IGI] [GO:0030981 "cortical
microtubule cytoskeleton" evidence=IDA] [GO:0030989 "dynein-driven
meiotic oscillatory nuclear movement" evidence=IMP] [GO:0034613
"cellular protein localization" evidence=IMP] [GO:0051010
"microtubule plus-end binding" evidence=NAS] InterPro:IPR000938
PomBase:SPAC27D7.13c Pfam:PF01302 EMBL:CU329670 GO:GO:0005816
GO:GO:0034613 GenomeReviews:CU329670_GR GO:GO:0005869 GO:GO:0000753
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0030437 GO:GO:0005881
GO:GO:0051010 GO:GO:0030989 GO:GO:0007131 GO:GO:0000743
GO:GO:0030981 GO:GO:0007129 OrthoDB:EOG4ZGSMC EMBL:AB000269
PIR:T38446 PIR:T38993 RefSeq:NP_594619.1 ProteinModelPortal:O42667
IntAct:O42667 STRING:O42667 EnsemblFungi:SPAC27D7.13c.1
GeneID:2542069 KEGG:spo:SPAC27D7.13c NextBio:20803142
GermOnline:SPAC27D7.13c Uniprot:O42667
Length = 670
Score = 139 (54.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECEENYGMFVK 227
G V F G T F SG+W+GV+L GKN+G+VK +YF CE+ G+FV+
Sbjct: 17 GIVRFAGSTDFESGIWLGVELLNGKGKNDGSVKGKRYFSCEKGKGIFVR 65
>SGD|S000006095 [details] [associations]
symbol:NIP100 "Large subunit of the dynactin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000235 "astral
microtubule" evidence=IDA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IDA] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0008017 "microtubule
binding" evidence=ISS] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0003774 "motor
activity" evidence=IEA] [GO:0030286 "dynein complex" evidence=IEA]
InterPro:IPR000938 SGD:S000006095 Pfam:PF01302 GO:GO:0000132
GO:GO:0005737 EMBL:BK006949 GO:GO:0005869 GO:GO:0008017
GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0030286 GO:GO:0003774 EMBL:X72227 EMBL:Z73530 PIR:S65186
RefSeq:NP_015151.1 ProteinModelPortal:P33420 SMR:P33420
DIP:DIP-1473N IntAct:P33420 MINT:MINT-389199 STRING:P33420
PRIDE:P33420 EnsemblFungi:YPL174C GeneID:855929 KEGG:sce:YPL174C
CYGD:YPL174c GeneTree:ENSGT00700000104543 OMA:TIAHESA
OrthoDB:EOG4ZGSMC NextBio:980666 Genevestigator:P33420
GermOnline:YPL174C Uniprot:P33420
Length = 868
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 179 GTVMFVGETKFSSGVWVGVKLDEPFGKNNGTVKDVKYFECE-----EN---YGMFVKPGR 230
G V F+GET+F+ G+W G++LD+P GKN+G+ ++YF+ + N YG+F K
Sbjct: 28 GRVKFIGETQFAKGIWYGIELDKPLGKNDGSANGIRYFDIDLKKANSNGGYYGLFCKKDT 87
Query: 231 L 231
L
Sbjct: 88 L 88
>UNIPROTKB|F1NVX8 [details] [associations]
symbol:TBCE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0014889
"muscle atrophy" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000938
PROSITE:PS51450 Pfam:PF01302 GO:GO:0000226 GO:GO:0048589
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 PROSITE:PS50053
GeneTree:ENSGT00530000063405 GO:GO:0007023 OMA:CLRNPLT
EMBL:AADN02051948 EMBL:AADN02051947 IPI:IPI00583476
Ensembl:ENSGALT00000022606 Uniprot:F1NVX8
Length = 526
Score = 128 (50.1 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 178 FGTVMFVGETKFSSGVWVGVKLDEPF-GKNNGTVKDVKYFECEE-NYGMFVKPGRLTIG- 234
+GTV +VG ++GVW+GV+ D+P GK++GT + +YF+C G F++P + G
Sbjct: 17 YGTVRYVGSVSPTAGVWLGVEWDDPQRGKHDGTYEGKQYFKCRHPRGGSFIRPNKANFGV 76
Query: 235 DF 236
DF
Sbjct: 77 DF 78
>FB|FBgn0033055 [details] [associations]
symbol:tbce "tubulin-specific chaperone E" species:7227
"Drosophila melanogaster" [GO:0007021 "tubulin complex assembly"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0046785
"microtubule polymerization" evidence=IGI;IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000938 Pfam:PF01302 EMBL:AE013599 GO:GO:0005737
GO:GO:0022008 GO:GO:0007274 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0008582 GO:GO:0046785
RefSeq:NP_995747.1 ProteinModelPortal:A1Z6J4 SMR:A1Z6J4
STRING:A1Z6J4 PaxDb:A1Z6J4 PRIDE:A1Z6J4 GeneID:35532 UCSC:CG7861-RA
FlyBase:FBgn0033055 eggNOG:KOG3207 InParanoid:A1Z6J4
OrthoDB:EOG4T4B9T PhylomeDB:A1Z6J4 NextBio:793888 Bgee:A1Z6J4
Uniprot:A1Z6J4
Length = 542
Score = 124 (48.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 165 VGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPF-GKNNGTVKDVKYFECEE-NY 222
+G R KI D+ +GTV +VGE G W+G++ D+ GK+NG V +YF+ +
Sbjct: 14 LGTRIKIGDN---YGTVRYVGEVSGHMGSWLGIEWDDGLRGKHNGIVDGKRYFQTQTPTG 70
Query: 223 GMFVKPGRL 231
G F++PG++
Sbjct: 71 GSFIRPGKV 79
>MGI|MGI:1917680 [details] [associations]
symbol:Tbce "tubulin-specific chaperone E" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006457 "protein folding"
evidence=TAS] [GO:0007021 "tubulin complex assembly" evidence=TAS]
[GO:0007023 "post-chaperonin tubulin folding pathway" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0008344 "adult
locomotory behavior" evidence=IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0014889 "muscle atrophy"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] [GO:0051082 "unfolded protein binding" evidence=TAS]
InterPro:IPR000938 MGI:MGI:1917680 Pfam:PF01302 GO:GO:0005737
GO:GO:0000226 GO:GO:0005856 GO:GO:0051082 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 GO:GO:0007021 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 CTD:6905
HOGENOM:HOG000154513 HOVERGEN:HBG084170 OMA:CLRNPLT
OrthoDB:EOG41NTKV EMBL:AY082332 EMBL:AK167383 EMBL:BC050206
IPI:IPI00229931 RefSeq:NP_848027.1 UniGene:Mm.260209 PDB:1WJN
PDBsum:1WJN ProteinModelPortal:Q8CIV8 SMR:Q8CIV8 STRING:Q8CIV8
PhosphoSite:Q8CIV8 PaxDb:Q8CIV8 PRIDE:Q8CIV8
Ensembl:ENSMUST00000039894 GeneID:70430 KEGG:mmu:70430
UCSC:uc007pmq.1 InParanoid:Q8CIV8 EvolutionaryTrace:Q8CIV8
NextBio:331607 Bgee:Q8CIV8 CleanEx:MM_TBCE Genevestigator:Q8CIV8
GermOnline:ENSMUSG00000039233 Uniprot:Q8CIV8
Length = 524
Score = 121 (47.7 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 165 VGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPF-GKNNGTVKDVKYFECEE-NY 222
+G+R ++N + TV F G +G+W+GV+ D P GK++G+ + YF+C
Sbjct: 10 IGRRVEVNGE---YATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTG 66
Query: 223 GMFVKPGRLTIGD 235
G FV+P ++ GD
Sbjct: 67 GSFVRPSKVNFGD 79
>ZFIN|ZDB-GENE-051030-120 [details] [associations]
symbol:tbce "tubulin folding cofactor E"
species:7955 "Danio rerio" [GO:0007023 "post-chaperonin tubulin
folding pathway" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000938 Pfam:PF01302
ZFIN:ZDB-GENE-051030-120 GO:GO:0005737 GO:GO:0005856
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 eggNOG:NOG245706 GeneTree:ENSGT00530000063405
GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513 HOVERGEN:HBG084170
EMBL:BC085669 IPI:IPI00507049 RefSeq:NP_001035078.2
UniGene:Dr.84734 ProteinModelPortal:Q5U378 SMR:Q5U378 STRING:Q5U378
Ensembl:ENSDART00000065585 Ensembl:ENSDART00000127915 GeneID:664760
KEGG:dre:664760 InParanoid:Q5U378 NextBio:20902338
ArrayExpress:Q5U378 Bgee:Q5U378 Uniprot:Q5U378
Length = 521
Score = 119 (46.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 159 ILKDIEVGKR-CKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPF-GKNNGTVKDVKYF 216
++ D VG+R C D GTV +VG ++GVW+GV+ D P GK++G+ V+YF
Sbjct: 1 MMLDEAVGRRVC----CDGERGTVRYVGPVPPTAGVWLGVEWDHPERGKHDGSHDGVRYF 56
Query: 217 ECEE-NYGMFVKPGRLTIG 234
C G FV+P + + G
Sbjct: 57 TCRHPTGGSFVRPQKASFG 75
>DICTYBASE|DDB_G0269990 [details] [associations]
symbol:tbcE "tubulin binding cofactor E"
species:44689 "Dictyostelium discoideum" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
dictyBase:DDB_G0269990 Pfam:PF01302 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0005856 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 InterPro:IPR025875 Pfam:PF12799 RefSeq:XP_646451.1
HSSP:Q8CI96 ProteinModelPortal:Q55CN0 EnsemblProtists:DDB0266639
GeneID:8617411 KEGG:ddi:DDB_G0269990 OMA:LVWETGE Uniprot:Q55CN0
Length = 525
Score = 120 (47.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 159 ILKDIEVGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPF-GKNNGTVKDVKYFE 217
I++ +G+R K +D V GT+ + G+ G W G++ D+P GK+ GTVK +YF+
Sbjct: 9 IVEYFYIGERVKGDDGSV--GTIRYQGKVDGFEGNWYGIEWDDPKRGKHQGTVKGKQYFK 66
Query: 218 C-EENYGMFVKPGRLTIGD 235
C + G F+K +L G+
Sbjct: 67 CINKGSGSFMKYEKLIKGE 85
Score = 35 (17.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 233 IGDFPVLDPFDELDEI 248
I D+ LD DEL +
Sbjct: 373 INDWKYLDKLDELQSL 388
>ASPGD|ASPL0000026995 [details] [associations]
symbol:AN5531 species:162425 "Emericella nidulans"
[GO:0006457 "protein folding" evidence=IEA] [GO:0007021 "tubulin
complex assembly" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] InterPro:IPR000938 Pfam:PF01302
EMBL:BN001305 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 eggNOG:NOG245706 OrthoDB:EOG4WWVTT
EMBL:AACD01000094 RefSeq:XP_663135.1 ProteinModelPortal:Q5B1P9
EnsemblFungi:CADANIAT00003551 GeneID:2871821 KEGG:ani:AN5531.2
HOGENOM:HOG000191667 Uniprot:Q5B1P9
Length = 606
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 180 TVMFVGETKFSSGVWVGVKLDEPF-GKNNGTVKDVKYFECEENY---GMFVKPGR 230
T+ +VG+ +SG W+GV+ D+P GK++G V+YF C N+ G FV+P R
Sbjct: 26 TIRYVGKVDGTSGEWLGVEWDDPTRGKHSGQHNGVRYFRCLRNHPTAGSFVRPSR 80
>RGD|1305533 [details] [associations]
symbol:Tbce "tubulin folding cofactor E" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=ISO;ISS] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008344 "adult
locomotory behavior" evidence=IEA;ISO] [GO:0009791 "post-embryonic
development" evidence=IEA;ISO] [GO:0014889 "muscle atrophy"
evidence=IEA;ISO] [GO:0048589 "developmental growth"
evidence=IEA;ISO] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA;ISO] InterPro:IPR000938 Pfam:PF01302
RGD:1305533 GO:GO:0005737 GO:GO:0000226 GO:GO:0005856 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706
GO:GO:0014889 GO:GO:0048936 GeneTree:ENSGT00530000063405
GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513 HOVERGEN:HBG084170
OMA:CLRNPLT OrthoDB:EOG41NTKV EMBL:BC089833 IPI:IPI00364903
RefSeq:NP_001012161.1 UniGene:Rn.3547 ProteinModelPortal:Q5FVQ9
SMR:Q5FVQ9 STRING:Q5FVQ9 PhosphoSite:Q5FVQ9 PRIDE:Q5FVQ9
Ensembl:ENSRNOT00000040743 GeneID:361255 KEGG:rno:361255
UCSC:RGD:1305533 InParanoid:Q5FVQ9 NextBio:675707
Genevestigator:Q5FVQ9 GermOnline:ENSRNOG00000029667 Uniprot:Q5FVQ9
Length = 524
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 165 VGKRCKINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPF-GKNNGTVKDVKYFECEE-NY 222
+G+R ++N + TV F G +G+W+GV+ D P GK++G+ + YF+C
Sbjct: 10 IGRRVEVNGE---YATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTG 66
Query: 223 GMFVKPGRLTIG-DF 236
G FV+P + G DF
Sbjct: 67 GSFVRPNIVNFGEDF 81
>UNIPROTKB|F1RGX1 [details] [associations]
symbol:TBCE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0014889 "muscle atrophy" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0007023 "post-chaperonin
tubulin folding pathway" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0000226 GO:GO:0008344 GO:GO:0009791
GO:GO:0048589 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 EMBL:CU468332
Ensembl:ENSSSCT00000011118 OMA:KLPSILY Uniprot:F1RGX1
Length = 102
Score = 90 (36.7 bits), Expect = 0.00058, P = 0.00058
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 192 GVWVGVKLDEPF-GKNNGTVKDVKYFECEE-NYGMFVKPGRLTIG-DF 236
G+W+GV+ D P GK++G+ + YF+C G F++P ++ G DF
Sbjct: 12 GLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGSFIRPNKVNFGVDF 59
>TAIR|locus:2825339 [details] [associations]
symbol:PFI "AT1G71440" species:3702 "Arabidopsis
thaliana" [GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IGI] [GO:0007021
"tubulin complex assembly" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
Pfam:PF01302 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507
GO:GO:0009793 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 HSSP:Q20728
EMBL:BT002403 EMBL:BT008888 EMBL:AK118835 IPI:IPI00529655
RefSeq:NP_565017.1 UniGene:At.35185 UniGene:At.48359
ProteinModelPortal:Q8GRL7 SMR:Q8GRL7 STRING:Q8GRL7 PaxDb:Q8GRL7
PRIDE:Q8GRL7 DNASU:843485 EnsemblPlants:AT1G71440.1 GeneID:843485
KEGG:ath:AT1G71440 TAIR:At1g71440 HOGENOM:HOG000241155
InParanoid:Q8GRL7 OMA:EMYVLSA PhylomeDB:Q8GRL7
ProtClustDB:CLSN2689143 ArrayExpress:Q8GRL7 Genevestigator:Q8GRL7
Uniprot:Q8GRL7
Length = 531
Score = 114 (45.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 165 VGKRC-KINDSDVRFGTVMFVGETKFSSGVWVGVKLDEPF-GKNNGTVKDVKYFECE-EN 221
+G+R +NDS R GTV +VG+ + SG W+GV D+ GK+NG+V V YF ++
Sbjct: 12 IGQRVHSLNDSR-RVGTVKYVGDVEGYSGTWIGVDWDQDGDGKHNGSVNGVFYFNGRSQS 70
Query: 222 YGMFVKPGRLTIG 234
FV+ L+ G
Sbjct: 71 SASFVRSQNLSRG 83
Score = 35 (17.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 228 PGRLTIGDFPVL-DPFDELDEI 248
PG +T+G +L + F +L I
Sbjct: 469 PGSITVGKLKILSENFFKLKSI 490
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.136 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 248 213 0.00084 112 3 11 22 0.42 33
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 86
No. of states in DFA: 590 (63 KB)
Total size of DFA: 172 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.04u 0.09s 18.13t Elapsed: 00:00:05
Total cpu time: 18.05u 0.09s 18.14t Elapsed: 00:00:05
Start: Thu Aug 15 15:17:58 2013 End: Thu Aug 15 15:18:03 2013