BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13906
(914 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 236/416 (56%), Positives = 283/416 (68%), Gaps = 51/416 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+AF+LI K
Sbjct: 24 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKF 83
Query: 61 EE----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
EE FH Q+ GG I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VA
Sbjct: 84 EEWCSQFHDIQS---GGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA 140
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--G 174
S+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++ G
Sbjct: 141 SEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPLILAGG 199
Query: 175 NQFGMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
+ +Q +S MG +G+NPLAGLAALGLGG + GGLN AALAALA SQL
Sbjct: 200 QAYTIQGNYAVPAHSDMG--KLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQL 257
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+T+ N N+ Q NN+ T EMTVPNELIG +IGKGGTKI EI
Sbjct: 258 RTS------NTNRQQPAANNQ--------------THEMTVPNELIGCIIGKGGTKIAEI 297
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 347
R+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLI+MSVEL +ANL E+
Sbjct: 298 RQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVELQKANL------EA 351
Query: 348 NMDDFSSDNNLP-----SSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSA 398
P S++P ++PLA+A+P LAQ+L+KPGALNAL+SL+A
Sbjct: 352 QNTQTPGSGTTPGATGASASPSNTTTTASPLASAIP-LAQLLSKPGALNALSSLTA 406
Score = 358 bits (919), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 235/424 (55%), Positives = 282/424 (66%), Gaps = 51/424 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+A
Sbjct: 16 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA 75
Query: 498 FSLITKNIEE----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
F+LI K EE FH Q+ GG I LRLIVPASQCGS+IGKGGS+IK IRE
Sbjct: 76 FTLICKKFEEWCSQFHDIQS---GGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREV 132
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
+GAS+ VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ G
Sbjct: 133 TGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VG 191
Query: 614 GPGLI--GNQFGMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
GP ++ G + +Q +S MG +G+NPLAGLAALGLGG + GGLN AAL
Sbjct: 192 GPLILAGGQAYTIQGNYAVPAHSDMG--KLGSNPLAGLAALGLGGLATPANTGGLNPAAL 249
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
AALA SQL+T+ N N+ Q NN+ T EMTVPNELIG +IGK
Sbjct: 250 AALAGSQLRTS------NTNRQQPAANNQ--------------THEMTVPNELIGCIIGK 289
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
GGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLI+MSVEL +ANL
Sbjct: 290 GGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVELQKANL 349
Query: 785 NGEGGGESNMDDFSSDNNLP-----SSAPLAGLNASNPLAAALPQLAQILTKPAGLNASN 839
E+ P S++P ++PLA+A+P LAQ+L+KP LNA +
Sbjct: 350 ------EAQNTQTPGSGTTPGATGASASPSNTTTTASPLASAIP-LAQLLSKPGALNALS 402
Query: 840 PLAA 843
L A
Sbjct: 403 SLTA 406
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 137 VTQAIYQIC 145
+ +A IC
Sbjct: 72 IFKAFTLIC 80
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 582 VTQAIYQIC 590
+ +A IC
Sbjct: 72 IFKAFTLIC 80
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 362 bits (928), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 219/474 (46%), Positives = 292/474 (61%), Gaps = 74/474 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
G+EVG++IGK GETVK +R++SG+++ ISD STPERIVT+ G+ +++ +A LI +
Sbjct: 27 FHGREVGNVIGKGGETVKNIRDQSGARVLISDGSTPERIVTITGTTNAICKATELIGLKV 86
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EEF + QN NG + +LIVPASQCG IIGKGG +IK IRE+SGA++ VASDML
Sbjct: 87 EEFFERQNGDW--NGPKAPLTFKLIVPASQCGFIIGKGGCKIKEIRESSGAAIQVASDML 144
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG-GPGLIGNQFGM 179
PNSTER V+I G ++Q +YQ+C +++DSPP+ ATIPY P + +G +GN FG
Sbjct: 145 PNSTERLVSITGTTGTISQCVYQVCNVLLDSPPRSATIPYDPRSKTSGFASSAVGNDFGR 204
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
Q + NPLA LAALGLG S GG+N AALAALA SQL+T
Sbjct: 205 QRT---------NPLASLAALGLGTAS----TGGINPAALAALAGSQLRTG--------- 242
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITK--EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
NR NR+G + NQ N T+ MTVPN+LIG VIG+ G+KI EIR+ISGA++ I
Sbjct: 243 ----NRQNRNGSGEHKNQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHI 298
Query: 298 SK--SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 355
+K + E ++ DR IT+TG D+I++A+YLI MSVEL +ANL G+
Sbjct: 299 AKGEGTHENGENEDRHITITGNKDSISVAKYLIEMSVELQKANLEGQ------------- 345
Query: 356 NNLPSSAPLA-GLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGG 414
+ PL + A++PL++A+P LAQ+ KPGA+NAL+SLSALGGL+DLL
Sbjct: 346 -----THPLVLTMVAASPLSSAIP-LAQLFAKPGAINALSSLSALGGLTDLL-------- 391
Query: 415 SGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREE 468
G G Q P IQTTGV R + + + SGE K R +
Sbjct: 392 ----GALSGANQSP---PIQTTGVHRPKNYFQRNRS------PSGEKTKADRTK 432
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 216/477 (45%), Positives = 287/477 (60%), Gaps = 91/477 (19%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R + G+EVG++IGK GETVK +R++SG+++ ISD STPERIVT+ G+ +++ +A
Sbjct: 19 VNLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDGSTPERIVTITGTTNAICKA 78
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
LI +EEF + QN NG + +LIVPASQCG IIGKGG +IK IRE+SGA+
Sbjct: 79 TELIGLKVEEFFERQNGDW--NGPKAPLTFKLIVPASQCGFIIGKGGCKIKEIRESSGAA 136
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG-GPG 616
+ VASDMLPNSTER V+I G ++Q +YQ+C +++DSPP+ ATIPY P + +G
Sbjct: 137 IQVASDMLPNSTERLVSITGTTGTISQCVYQVCNVLLDSPPRSATIPYDPRSKTSGFASS 196
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
+GN FG Q + NPLA LAALGLG S GG+N AALAALA SQL+T
Sbjct: 197 AVGNDFGRQRT---------NPLASLAALGLGTAS----TGGINPAALAALAGSQLRTG- 242
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK--EMTVPNELIGAVIGKGGTKIFEIRK 734
NR NR+G + NQ N T+ MTVPN+LIG VIG+ G+KI EIR+
Sbjct: 243 ------------NRQNRNGSGEHKNQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQ 290
Query: 735 ISGAMIRISK--SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 792
ISGA++ I+K + E ++ DR IT+TG D+I++A+YLI MSVEL +ANL G+
Sbjct: 291 ISGALVHIAKGEGTHENGENEDRHITITGNKDSISVAKYLIEMSVELQKANLEGQ----- 345
Query: 793 NMDDFSSDNNLPSSAPLA-GLNASNPLAAALPQLAQILTKPAGLNASNPLAAALPQLAQI 851
+ PL + A++PL++A+P LAQ+
Sbjct: 346 -------------THPLVLTMVAASPLSSAIP-LAQL----------------------- 368
Query: 852 LTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 908
KPGA+NAL+SLSALGGL+DLL G G Q P IQTTGV R
Sbjct: 369 FAKPGAINALSSLSALGGLTDLL------------GALSGANQSP---PIQTTGVHR 410
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +R++ + G++IGKGG +K IR+ SGA V ++ P ER V I G +A+ +
Sbjct: 21 LTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDGSTP---ERIVTITGTTNAICK 77
Query: 140 AIYQICL 146
A I L
Sbjct: 78 ATELIGL 84
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 232/406 (57%), Positives = 279/406 (68%), Gaps = 48/406 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV GS +++F+AF+LI K
Sbjct: 23 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGSTNAIFKAFTLICKKF 82
Query: 61 EEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EEF Q+ + GG+G + I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VAS+M
Sbjct: 83 EEF---QDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEM 139
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQF 177
LPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++ G +
Sbjct: 140 LPNSTERAVTISGTGEAITQCIYHICTVMLESPPKGATIPYRPKPQ-VGGPVILAGGQAY 198
Query: 178 GMQ--NSLMGAPDM---GNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+Q ++ DM G +PLAGLAALGLGG + GGLN AALAALA SQL+T++
Sbjct: 199 TIQGNYAVPAHTDMSALGKSPLAGLAALGLGGLAPTNT-GGLNPAALAALAGSQLRTSNS 257
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
QN NQ H EMTVPNELIG +IGKGGTKI EIR+ISG
Sbjct: 258 RNQQNSNQQTH---------------------EMTVPNELIGCIIGKGGTKIAEIRQISG 296
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDF 352
AMIRIS + E DRTIT++G PDA+ALAQYLINMSVEL +ANL +
Sbjct: 297 AMIRISNCDDRESGVTDRTITISGNPDAVALAQYLINMSVELQKANLEAQ---------- 346
Query: 353 SSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSA 398
N+ + A++PLA+A+P LAQ+L KPGALNALTSLSA
Sbjct: 347 ---NSPSTGGSSQSSTAASPLASAIP-LAQLLAKPGALNALTSLSA 388
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 228/410 (55%), Positives = 277/410 (67%), Gaps = 48/410 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV GS +++F+AF+LI
Sbjct: 19 IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGSTNAIFKAFTLI 78
Query: 502 TKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
K EEF Q+ + GG+G + I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ V
Sbjct: 79 CKKFEEF---QDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV 135
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-- 618
AS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++
Sbjct: 136 ASEMLPNSTERAVTISGTGEAITQCIYHICTVMLESPPKGATIPYRPKPQ-VGGPVILAG 194
Query: 619 GNQFGMQ--NSLMGAPDM---GNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
G + +Q ++ DM G +PLAGLAALGLGG + GGLN AALAALA SQL+
Sbjct: 195 GQAYTIQGNYAVPAHTDMSALGKSPLAGLAALGLGGLAPTNT-GGLNPAALAALAGSQLR 253
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
T++ QN NQ H EMTVPNELIG +IGKGGTKI EIR
Sbjct: 254 TSNSRNQQNSNQQTH---------------------EMTVPNELIGCIIGKGGTKIAEIR 292
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESN 793
+ISGAMIRIS + E DRTIT++G PDA+ALAQYLINMSVEL +ANL +
Sbjct: 293 QISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQYLINMSVELQKANLEAQ------ 346
Query: 794 MDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPAGLNASNPLAA 843
N+ + A++PLA+A+P LAQ+L KP LNA L+A
Sbjct: 347 -------NSPSTGGSSQSSTAASPLASAIP-LAQLLAKPGALNALTSLSA 388
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 68 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 127
NK++ + + + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 5 NKNMINDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 61
Query: 128 VNIKGVPDAVTQAIYQIC 145
V + G +A+ +A IC
Sbjct: 62 VTVTGSTNAIFKAFTLIC 79
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 513 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 572
NK++ + + + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 5 NKNMINDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 61
Query: 573 VNIKGVPDAVTQAIYQIC 590
V + G +A+ +A IC
Sbjct: 62 VTVTGSTNAIFKAFTLIC 79
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 233/419 (55%), Positives = 281/419 (67%), Gaps = 57/419 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+AF+LI K
Sbjct: 24 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKF 83
Query: 61 EEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EE+ + G G + I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VASDM
Sbjct: 84 EEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDM 143
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQF 177
LPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++ G +
Sbjct: 144 LPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPVILAGGQAY 202
Query: 178 GMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+Q +S MG +G+NPLAGLAALGLGG + GGLN AALAALA SQL+T+
Sbjct: 203 TIQGNYAVPAHSDMG--KLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTS 260
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
N N+ Q NN+ T EMTVPNELIG +IGKGGTKI EIR+I
Sbjct: 261 ------NTNRQQPAANNQ--------------THEMTVPNELIGCIIGKGGTKIAEIRQI 300
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMD 350
SGAMIRIS E E + DRTIT+TG PDA+ALAQYLI+MSVEL +ANL +
Sbjct: 301 SGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVELQKANLEAQ-------- 352
Query: 351 DFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTKPGALNALTSLSA 398
+ P S G + ++PLA+A+P LAQ+L+KPGALNAL+SL+A
Sbjct: 353 ----NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSKPGALNALSSLTA 406
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 232/427 (54%), Positives = 280/427 (65%), Gaps = 57/427 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+A
Sbjct: 16 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA 75
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
F+LI K EE+ + G G + I LRLIVPASQCGS+IGKGGS+IK IRE +GA
Sbjct: 76 FTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 135
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
S+ VASDMLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP
Sbjct: 136 SIQVASDMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPV 194
Query: 617 LI--GNQFGMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
++ G + +Q +S MG +G+NPLAGLAALGLGG + GGLN AALAAL
Sbjct: 195 ILAGGQAYTIQGNYAVPAHSDMG--KLGSNPLAGLAALGLGGLATPANTGGLNPAALAAL 252
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 727
A SQL+T+ N N+ Q NN+ T EMTVPNELIG +IGKGGT
Sbjct: 253 AGSQLRTS------NTNRQQPAANNQ--------------THEMTVPNELIGCIIGKGGT 292
Query: 728 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 787
KI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLI+MSVEL +ANL +
Sbjct: 293 KIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVELQKANLEAQ 352
Query: 788 GGGESNMDDFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTKPAGLN 836
+ P S G + ++PLA+A+P LAQ+L+KP LN
Sbjct: 353 ------------NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSKPGALN 399
Query: 837 ASNPLAA 843
A + L A
Sbjct: 400 ALSSLTA 406
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 137 VTQAIYQIC 145
+ +A IC
Sbjct: 72 IFKAFTLIC 80
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 582 VTQAIYQIC 590
+ +A IC
Sbjct: 72 IFKAFTLIC 80
>gi|357621941|gb|EHJ73587.1| hypothetical protein KGM_22691 [Danaus plexippus]
Length = 431
Score = 355 bits (911), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 237/479 (49%), Positives = 282/479 (58%), Gaps = 110/479 (22%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G+ S+F+AF+LI K
Sbjct: 1 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGNTSSIFKAFTLICKKF 60
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA-SVYVASDM 119
EE+ N+ GG G I LRLIVPASQCGS+IGKGGS+IK IR+ +G V+VAS+M
Sbjct: 61 EEWCSQFNE--GGGGSRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTGRLYVHVASEM 118
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQF 177
LPNSTER V I G DA+TQ IY IC +M++SPPKGATIPYRP P N GP ++ G +
Sbjct: 119 LPNSTERAVTISGTCDAITQCIYHICCVMLESPPKGATIPYRPKP-NVAGPVILAGGQAY 177
Query: 178 GMQ-NSLMGAPDMGNNPLAGLAALG--LGGNSG-------------GGMG---------- 211
+Q N + A D P+ + + L G GG+
Sbjct: 178 TIQGNYAVPAQDAVCAPVFPMLEVKPPLVGALPPAHLLPPLDHHLMGGLAKSPLAGLAAL 237
Query: 212 ----------GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ 261
GGLN AALAALA SQL++++ RNQ TNQQ +
Sbjct: 238 GLGGLGPANTGGLNPAALAALAGSQLRSSNTGRNQ----------------PATNQQSH- 280
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
EMTVPNELIG +IGKGGTKI EIR+ISGAMIRIS E E S DRTIT++G PD++
Sbjct: 281 ---EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTITISGNPDSV 337
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
ALAQYLINMSVEL +ANL G G G PLA+A+P LA
Sbjct: 338 ALAQYLINMSVELQKANLEGGGSG-------------------------GPLASAIP-LA 371
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 440
Q+L+K GAL AL SLSALGGL+DLL GG +QTTGV R
Sbjct: 372 QLLSKSGALGALGSLSALGGLTDLLAGGP----------------------VQTTGVHR 408
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 238/507 (46%), Positives = 285/507 (56%), Gaps = 133/507 (26%)
Query: 446 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 505
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G+ S+F+AF+LI K
Sbjct: 1 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGNTSSIFKAFTLICKKF 60
Query: 506 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA-SVYVASDM 564
EE+ N+ GG G I LRLIVPASQCGS+IGKGGS+IK IR+ +G V+VAS+M
Sbjct: 61 EEWCSQFNE--GGGGSRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTGRLYVHVASEM 118
Query: 565 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQF 622
LPNSTER V I G DA+TQ IY IC +M++SPPKGATIPYRP P N GP ++ G +
Sbjct: 119 LPNSTERAVTISGTCDAITQCIYHICCVMLESPPKGATIPYRPKP-NVAGPVILAGGQAY 177
Query: 623 GMQ-NSLMGAPDMGNNPLAGLAALG--LGGNSG-------------GGMG---------- 656
+Q N + A D P+ + + L G GG+
Sbjct: 178 TIQGNYAVPAQDAVCAPVFPMLEVKPPLVGALPPAHLLPPLDHHLMGGLAKSPLAGLAAL 237
Query: 657 ----------GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ 706
GGLN AALAALA SQL++++ RNQ TNQQ +
Sbjct: 238 GLGGLGPANTGGLNPAALAALAGSQLRSSNTGRNQ----------------PATNQQSH- 280
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
EMTVPNELIG +IGKGGTKI EIR+ISGAMIRIS E E S DRTIT++G PD++
Sbjct: 281 ---EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTITISGNPDSV 337
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 826
ALAQYLINMSVEL +ANL G G G PLA+A+P
Sbjct: 338 ALAQYLINMSVELQKANLEGGGSG-------------------------GPLASAIP--- 369
Query: 827 QILTKPAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNS 886
LAQ+L+K GAL AL SLSALGGL+DLL GG
Sbjct: 370 ---------------------LAQLLSKSGALGALGSLSALGGLTDLLAGGP-------- 400
Query: 887 GGFGGVPQGPNYANIQTTGVQRRNSLS 913
+QTTGV R + L+
Sbjct: 401 --------------VQTTGVHRPHKLT 413
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 232/419 (55%), Positives = 279/419 (66%), Gaps = 57/419 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+AF+LI K
Sbjct: 24 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKF 83
Query: 61 EEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EE+ + G G + I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VASDM
Sbjct: 84 EEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDM 143
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQF 177
LPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++ G +
Sbjct: 144 LPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPVILAGGQAY 202
Query: 178 GMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+Q +S MG +G+NPLAGLAALGLGG + GGLN AALAALA SQL+T+
Sbjct: 203 TIQGNYAVPAHSDMG--KLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTS 260
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
+ R Q NQ T EMTVPNELIG +IGKGGTKI EIR+I
Sbjct: 261 NTNRQQPAGNNQ--------------------THEMTVPNELIGCIIGKGGTKIAEIRQI 300
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMD 350
SGAMIRIS E E + DRTIT+TG PDA+ALAQYLI+MSVEL +ANL +
Sbjct: 301 SGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVELQKANLEAQ-------- 352
Query: 351 DFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTKPGALNALTSLSA 398
+ P S G + ++PLA+A+P LAQ+L+KPGALNAL+SL+A
Sbjct: 353 ----NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSKPGALNALSSLTA 406
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 231/427 (54%), Positives = 278/427 (65%), Gaps = 57/427 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+A
Sbjct: 16 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA 75
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
F+LI K EE+ + G G + I LRLIVPASQCGS+IGKGGS+IK IRE +GA
Sbjct: 76 FTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 135
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
S+ VASDMLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP
Sbjct: 136 SIQVASDMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPV 194
Query: 617 LI--GNQFGMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
++ G + +Q +S MG +G+NPLAGLAALGLGG + GGLN AALAAL
Sbjct: 195 ILAGGQAYTIQGNYAVPAHSDMG--KLGSNPLAGLAALGLGGLATPANTGGLNPAALAAL 252
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 727
A SQL+T++ R Q NQ T EMTVPNELIG +IGKGGT
Sbjct: 253 AGSQLRTSNTNRQQPAGNNQ--------------------THEMTVPNELIGCIIGKGGT 292
Query: 728 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 787
KI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLI+MSVEL +ANL +
Sbjct: 293 KIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVELQKANLEAQ 352
Query: 788 GGGESNMDDFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTKPAGLN 836
+ P S G + ++PLA+A+P LAQ+L+KP LN
Sbjct: 353 ------------NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSKPGALN 399
Query: 837 ASNPLAA 843
A + L A
Sbjct: 400 ALSSLTA 406
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 137 VTQAIYQIC 145
+ +A IC
Sbjct: 72 IFKAFTLIC 80
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 582 VTQAIYQIC 590
+ +A IC
Sbjct: 72 IFKAFTLIC 80
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 232/419 (55%), Positives = 281/419 (67%), Gaps = 57/419 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+AF+LI K
Sbjct: 24 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKF 83
Query: 61 EEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EE+ + G G + I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VASDM
Sbjct: 84 EEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDM 143
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQF 177
LPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++ G +
Sbjct: 144 LPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPVILAGGQAY 202
Query: 178 GMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+Q +S MG +G+NPLAGLAALGLGG + GGLN AALAALA SQL+T+
Sbjct: 203 TIQGNYAVPAHSDMG--KLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTS 260
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
N N+ Q NN+ T EMTVPNELIG +IGKGGTKI EIR+I
Sbjct: 261 ------NTNRQQPAANNQ--------------THEMTVPNELIGCIIGKGGTKIAEIRQI 300
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMD 350
SGAMIRIS E E + DRTIT+TG PDA++LAQYLI+MSVEL +ANL +
Sbjct: 301 SGAMIRISNCEEREGGATDRTITITGNPDAVSLAQYLISMSVELQKANLEAQ-------- 352
Query: 351 DFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTKPGALNALTSLSA 398
+ P S G + ++PLA+A+P LAQ+L+KPGALNAL+SL+A
Sbjct: 353 ----NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSKPGALNALSSLTA 406
Score = 348 bits (893), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 231/427 (54%), Positives = 280/427 (65%), Gaps = 57/427 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+A
Sbjct: 16 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA 75
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
F+LI K EE+ + G G + I LRLIVPASQCGS+IGKGGS+IK IRE +GA
Sbjct: 76 FTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 135
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
S+ VASDMLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP
Sbjct: 136 SIQVASDMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPV 194
Query: 617 LI--GNQFGMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
++ G + +Q +S MG +G+NPLAGLAALGLGG + GGLN AALAAL
Sbjct: 195 ILAGGQAYTIQGNYAVPAHSDMG--KLGSNPLAGLAALGLGGLATPANTGGLNPAALAAL 252
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 727
A SQL+T+ N N+ Q NN+ T EMTVPNELIG +IGKGGT
Sbjct: 253 AGSQLRTS------NTNRQQPAANNQ--------------THEMTVPNELIGCIIGKGGT 292
Query: 728 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 787
KI EIR+ISGAMIRIS E E + DRTIT+TG PDA++LAQYLI+MSVEL +ANL +
Sbjct: 293 KIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQYLISMSVELQKANLEAQ 352
Query: 788 GGGESNMDDFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTKPAGLN 836
+ P S G + ++PLA+A+P LAQ+L+KP LN
Sbjct: 353 ------------NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSKPGALN 399
Query: 837 ASNPLAA 843
A + L A
Sbjct: 400 ALSSLTA 406
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 137 VTQAIYQIC 145
+ +A IC
Sbjct: 72 IFKAFTLIC 80
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 582 VTQAIYQIC 590
+ +A IC
Sbjct: 72 IFKAFTLIC 80
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 236/424 (55%), Positives = 281/424 (66%), Gaps = 62/424 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+AF+LI K
Sbjct: 21 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKF 80
Query: 61 EE----FHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
EE FH Q GG G I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+
Sbjct: 81 EEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQ 140
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI- 173
VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++
Sbjct: 141 VASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPVILA 199
Query: 174 -GNQFGMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASS 225
G + +Q +S MG +G+NPLA LAALGLGG + GGLN AALAALA S
Sbjct: 200 GGQAYTIQGNYAVPAHSDMG--KLGSNPLASLAALGLGGLATPANTGGLNPAALAALAGS 257
Query: 226 QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 285
QL+T+ N N+ Q NN+ T EMTVPNELIG +IGKGGTKI
Sbjct: 258 QLRTS------NTNRQQPAANNQ--------------THEMTVPNELIGCIIGKGGTKIA 297
Query: 286 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLINMSVEL +ANL +
Sbjct: 298 EIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLINMSVELQKANLEAQ--- 354
Query: 346 ESNMDDFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTKPGALNALT 394
+ P S G + ++PLA+A+P LAQ+L+KPGALNAL+
Sbjct: 355 ---------NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSKPGALNALS 404
Query: 395 SLSA 398
SL+A
Sbjct: 405 SLTA 408
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 235/432 (54%), Positives = 280/432 (64%), Gaps = 62/432 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+A
Sbjct: 13 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA 72
Query: 498 FSLITKNIEE----FHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIR 551
F+LI K EE FH Q GG G I LRLIVPASQCGS+IGKGGS+IK IR
Sbjct: 73 FTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIR 132
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN 611
E +GAS+ VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ
Sbjct: 133 EVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ- 191
Query: 612 AGGPGLI--GNQFGMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 662
GGP ++ G + +Q +S MG +G+NPLA LAALGLGG + GGLN A
Sbjct: 192 VGGPVILAGGQAYTIQGNYAVPAHSDMG--KLGSNPLASLAALGLGGLATPANTGGLNPA 249
Query: 663 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 722
ALAALA SQL+T+ N N+ Q NN+ T EMTVPNELIG +I
Sbjct: 250 ALAALAGSQLRTS------NTNRQQPAANNQ--------------THEMTVPNELIGCII 289
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRA 782
GKGGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLINMSVEL +A
Sbjct: 290 GKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLINMSVELQKA 349
Query: 783 NLNGEGGGESNMDDFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTK 831
NL + + P S G + ++PLA+A+P LAQ+L+K
Sbjct: 350 NLEAQ------------NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSK 396
Query: 832 PAGLNASNPLAA 843
P LNA + L A
Sbjct: 397 PGALNALSSLTA 408
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 68 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 127
NK + + S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 3 NKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 59
Query: 128 VNIKGVPDAVTQAIYQIC 145
V + G +++ +A IC
Sbjct: 60 VTVTGPTNSIFKAFTLIC 77
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 513 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 572
NK + + S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 3 NKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 59
Query: 573 VNIKGVPDAVTQAIYQIC 590
V + G +++ +A IC
Sbjct: 60 VTVTGPTNSIFKAFTLIC 77
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 234/414 (56%), Positives = 279/414 (67%), Gaps = 40/414 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+AF+LI K
Sbjct: 26 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKF 85
Query: 61 EE----FHKNQNKHLGGNGES---QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
EE FH Q G G I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+
Sbjct: 86 EEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASI 145
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI 173
VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++
Sbjct: 146 QVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPVIL 204
Query: 174 --GNQFGMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 224
G F +Q +S MG +G++PLAGLAALGLGG + GGLN AALAALA
Sbjct: 205 AGGQAFTIQGNYAVPAHSDMG--KLGSSPLAGLAALGLGGLAAPANTGGLNPAALAALAG 262
Query: 225 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 284
SQL+TN N N+ Q NN+ T EMTVPNELIG +IGKGGTKI
Sbjct: 263 SQLRTN------NANRQQPAANNQ--------------THEMTVPNELIGCIIGKGGTKI 302
Query: 285 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 344
EIR+ISGAMIRIS E E DRTIT+TG PD++ALAQYLINMSVEL +ANL +
Sbjct: 303 AEIRQISGAMIRISNCEEREGGPTDRTITITGNPDSVALAQYLINMSVELQKANLEAQNT 362
Query: 345 GESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSA 398
+++P ++PLA+A+P LAQ+L+KPGALNAL+SL+A
Sbjct: 363 QNPGSGTTPGATGASATSPSTTTTTASPLASAIP-LAQLLSKPGALNALSSLTA 415
Score = 345 bits (885), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 233/422 (55%), Positives = 278/422 (65%), Gaps = 40/422 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+A
Sbjct: 18 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA 77
Query: 498 FSLITKNIEE----FHKNQNKHLGGNGES---QLIQLRLIVPASQCGSIIGKGGSQIKTI 550
F+LI K EE FH Q G G I LRLIVPASQCGS+IGKGGS+IK I
Sbjct: 78 FTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 137
Query: 551 RETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQ 610
RE +GAS+ VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ
Sbjct: 138 REVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ 197
Query: 611 NAGGPGLI--GNQFGMQ-------NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNA 661
GGP ++ G F +Q +S MG +G++PLAGLAALGLGG + GGLN
Sbjct: 198 -VGGPVILAGGQAFTIQGNYAVPAHSDMG--KLGSSPLAGLAALGLGGLAAPANTGGLNP 254
Query: 662 AALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAV 721
AALAALA SQL+TN N N+ Q NN+ T EMTVPNELIG +
Sbjct: 255 AALAALAGSQLRTN------NANRQQPAANNQ--------------THEMTVPNELIGCI 294
Query: 722 IGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLR 781
IGKGGTKI EIR+ISGAMIRIS E E DRTIT+TG PD++ALAQYLINMSVEL +
Sbjct: 295 IGKGGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITGNPDSVALAQYLINMSVELQK 354
Query: 782 ANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPAGLNASNPL 841
ANL + +++P ++PLA+A+P LAQ+L+KP LNA + L
Sbjct: 355 ANLEAQNTQNPGSGTTPGATGASATSPSTTTTTASPLASAIP-LAQLLSKPGALNALSSL 413
Query: 842 AA 843
A
Sbjct: 414 TA 415
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 68 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 127
NK + + S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 8 NKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 64
Query: 128 VNIKGVPDAVTQAIYQIC 145
V + G +++ +A IC
Sbjct: 65 VTVTGPTNSIFKAFTLIC 82
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 513 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 572
NK + + S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 8 NKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 64
Query: 573 VNIKGVPDAVTQAIYQIC 590
V + G +++ +A IC
Sbjct: 65 VTVTGPTNSIFKAFTLIC 82
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 197/350 (56%), Positives = 246/350 (70%), Gaps = 29/350 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 140 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 198
Query: 618 IGN--QFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
+ N F +Q N + ++ NPLA LAALGL G + GG + AALAALA SQL+T
Sbjct: 199 LANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRT 258
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+
Sbjct: 259 AN-------------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQ 295
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
ISGAMIRIS E E + DRTIT++G PD++ALAQYLINMSVEL +ANL
Sbjct: 296 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 345
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 194/342 (56%), Positives = 242/342 (70%), Gaps = 29/342 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 206
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q N + ++ NPLA LAALGL G + GG + AALAALA SQL+T +
Sbjct: 207 IQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTAN------ 260
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAMIRI
Sbjct: 261 -------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI 303
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
S E E + DRTIT++G PD++ALAQYLINMSVEL +ANL
Sbjct: 304 SNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 345
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 11/63 (17%)
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRR 441
Q+LTKPGAL+AL++LSAL DLL + GN+ G G P GP +QTTGV R
Sbjct: 461 QLLTKPGALSALSNLSAL----DLLNLTT----LGNTNGAGANPGGP---PVQTTGVNRA 509
Query: 442 MRH 444
H
Sbjct: 510 KGH 512
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 137 VTQAIYQI 144
+ A I
Sbjct: 78 IFSAFTLI 85
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 582 VTQAIYQI 589
+ A I
Sbjct: 78 IFSAFTLI 85
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 11/59 (18%)
Query: 850 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 908
Q+LTKPGAL+AL++LSAL DLL + GN+ G G P GP +QTTGV R
Sbjct: 461 QLLTKPGALSALSNLSAL----DLLNLTT----LGNTNGAGANPGGP---PVQTTGVNR 508
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 198/355 (55%), Positives = 245/355 (69%), Gaps = 31/355 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 140 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 198
Query: 618 IGN--QFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
+ N F +Q N + ++ NPLA LAALGL G + GG+N ALAALA SQL+T
Sbjct: 199 LANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMTPAST-GGINHTALAALAGSQLRT 257
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ R Q Q QH EMTV N+LIG +IGKGGTKI EIR+
Sbjct: 258 ANANRAQ---QQQH---------------------EMTVSNDLIGCIIGKGGTKIAEIRQ 293
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 789
ISGAMIRIS E E + DRTIT++G PD++ALAQYLINMSVEL +ANL +
Sbjct: 294 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLQDQAA 348
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 241/347 (69%), Gaps = 31/347 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 206
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q N + ++ NPLA LAALGL G + GG+N ALAALA SQL+T + R Q
Sbjct: 207 IQGNYAVPTQEVAKNPLASLAALGLAGMTPAST-GGINHTALAALAGSQLRTANANRAQ- 264
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
Q QH EMTV N+LIG +IGKGGTKI EIR+ISGAMIRI
Sbjct: 265 --QQQH---------------------EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI 301
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 344
S E E + DRTIT++G PD++ALAQYLINMSVEL +ANL +
Sbjct: 302 SNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLQDQAA 348
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 137 VTQAIYQI 144
+ A I
Sbjct: 78 IFSAFTLI 85
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 13/64 (20%)
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSG-NSGGFGGVPQGPNYANIQTTGVQR 440
Q+LTKPGAL AL++LSAL DLL +S G +G NSG GG P +QTTGV R
Sbjct: 488 QLLTKPGALTALSNLSAL----DLLSL-TSLGNNGSNSGTPGGPP-------VQTTGVNR 535
Query: 441 RMRH 444
H
Sbjct: 536 AKGH 539
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 192/350 (54%), Positives = 242/350 (69%), Gaps = 29/350 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 140 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 198
Query: 618 IGN--QFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
+ N F +Q N + ++ NPLA LAALGL G + GG + AALAALA SQL+T
Sbjct: 199 LANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRT 258
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+
Sbjct: 259 AN-------------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQ 295
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 296 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 345
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/342 (55%), Positives = 238/342 (69%), Gaps = 29/342 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 206
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q N + ++ NPLA LAALGL G + GG + AALAALA SQL+T +
Sbjct: 207 IQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTAN------ 260
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAMIRI
Sbjct: 261 -------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI 303
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
S E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 304 SNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 345
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 50/266 (18%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
+ QI + VP G++IGK G+KI EIR+ +G I+++ SE +S +R +T++G+
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVA--SEMLPNSTERAVTLSGSA 161
Query: 319 DAIALAQYLINMSVELLRANLNGEGGGE------------SNMDDFSSDNNLPSSAPLAG 366
+ I Q + + + +L + G +N F+ N + P
Sbjct: 162 EQIT--QCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFTIQGNY--AVPTQE 217
Query: 367 LNASNPLAAALPQLAQIL--TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGV 424
+ A NPLA+ + G +N +L+AL G S L
Sbjct: 218 V-AKNPLASLAALGLAGMNPASTGGINHTAALAALAG-SQL------------------- 256
Query: 425 PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPE-- 482
AN Q++ + +G IIGK G + ++R+ SG+ I IS+ E
Sbjct: 257 ----RTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG 312
Query: 483 ---RIVTVIGSMDSLFRAFSLITKNI 505
R +T+ G+ DS+ A LI I
Sbjct: 313 NTDRTITISGNPDSVALAQYLINMRI 338
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 186/353 (52%), Positives = 238/353 (67%), Gaps = 17/353 (4%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EEF+ +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEFN-----DVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 135
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 136 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 194
Query: 618 IGN--QFGMQ-NSLMGAPDMGNNP---LAGLAALGLGGNSGGGMGGGLNAAALAALASSQ 671
+ N F +Q N + ++ NP LA L G+ S GG+ +A AA +
Sbjct: 195 LANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGELSASAARCQTD 254
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFE 731
++N ++ P+ + QQQ+ EMTV N+LIG +IGKGGTKI E
Sbjct: 255 FQSNLGSAPAALAALAGSQLRTANPANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAE 310
Query: 732 IRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
IR+ISGAMIRIS E E + DRTIT++G PD++ALAQYLINMSVEL +ANL
Sbjct: 311 IRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 363
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/345 (53%), Positives = 234/345 (67%), Gaps = 17/345 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EEF+ +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEFN-----DVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 143
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 144 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 202
Query: 179 MQ-NSLMGAPDMGNNP---LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR 234
+Q N + ++ NP LA L G+ S GG+ +A AA + ++N
Sbjct: 203 IQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGELSASAARCQTDFQSNLGSA 262
Query: 235 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
++ P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAM
Sbjct: 263 PAALAALAGSQLRTANPANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAM 318
Query: 295 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
IRIS E E + DRTIT++G PD++ALAQYLINMSVEL +ANL
Sbjct: 319 IRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 363
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 11/63 (17%)
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRR 441
Q+LTKPGAL+AL++LSAL DLL + GN+ G G P GP +QTTGV R
Sbjct: 479 QLLTKPGALSALSNLSAL----DLLNLTT----LGNTNGAGANPGGP---PVQTTGVNRA 527
Query: 442 MRH 444
H
Sbjct: 528 KGH 530
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 137 VTQAIYQI 144
+ A I
Sbjct: 78 IFSAFTLI 85
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 582 VTQAIYQI 589
+ A I
Sbjct: 78 IFSAFTLI 85
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 11/59 (18%)
Query: 850 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 908
Q+LTKPGAL+AL++LSAL DLL + GN+ G G P GP +QTTGV R
Sbjct: 479 QLLTKPGALSALSNLSAL----DLLNLTT----LGNTNGAGANPGGP---PVQTTGVNR 526
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/350 (55%), Positives = 240/350 (68%), Gaps = 31/350 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 140 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 198
Query: 618 IGN--QFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
+ N F +Q N + ++ NPLA LAALGL G + GG+N ALAALA SQL+T
Sbjct: 199 LANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMTPAST-GGINHTALAALAGSQLRT 257
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ R Q Q QH EMTV N+LIG +IGKGGTKI EIR+
Sbjct: 258 ANANRAQ---QQQH---------------------EMTVSNDLIGCIIGKGGTKIAEIRQ 293
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 294 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 343
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/342 (55%), Positives = 236/342 (69%), Gaps = 31/342 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 206
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q N + ++ NPLA LAALGL G + GG+N ALAALA SQL+T + R Q
Sbjct: 207 IQGNYAVPTQEVAKNPLASLAALGLAGMTPAST-GGINHTALAALAGSQLRTANANRAQ- 264
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
Q QH EMTV N+LIG +IGKGGTKI EIR+ISGAMIRI
Sbjct: 265 --QQQH---------------------EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI 301
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
S E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 302 SNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 343
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 193/350 (55%), Positives = 239/350 (68%), Gaps = 30/350 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ ++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTSAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 140 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 198
Query: 618 IGN--QFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
+ N F +Q N + ++ NPLA LAALGL G + GG + AALAALA SQL+T
Sbjct: 199 LANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRT 258
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ R Q Q QH EMTV N+LIG +IGKGGTKI EIR+
Sbjct: 259 ANANRAQ---QQQH---------------------EMTVSNDLIGCIIGKGGTKIAEIRQ 294
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 295 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 344
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/342 (55%), Positives = 235/342 (68%), Gaps = 30/342 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ ++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTSAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 206
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q N + ++ NPLA LAALGL G + GG + AALAALA SQL+T + R Q
Sbjct: 207 IQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTANANRAQ- 265
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
Q QH EMTV N+LIG +IGKGGTKI EIR+ISGAMIRI
Sbjct: 266 --QQQH---------------------EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI 302
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
S E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 303 SNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 344
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 192/350 (54%), Positives = 241/350 (68%), Gaps = 34/350 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EEF+ +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEFND-----VGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 135
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 136 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 194
Query: 618 IGN--QFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
+ N F +Q N + ++ NPLA LAALGL G + GG+N ALAALA SQL+T
Sbjct: 195 LANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPAST-GGINHTALAALAGSQLRT 253
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+
Sbjct: 254 AN-------------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQ 290
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 291 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 340
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 189/342 (55%), Positives = 237/342 (69%), Gaps = 34/342 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EEF+ +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEFND-----VGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 143
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 144 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 202
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q N + ++ NPLA LAALGL G + GG+N ALAALA SQL+T +
Sbjct: 203 IQGNYAVPTQEVAKNPLASLAALGLAGMNPAST-GGINHTALAALAGSQLRTAN------ 255
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAMIRI
Sbjct: 256 -------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI 298
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
S E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 299 SNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 340
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 189/370 (51%), Positives = 236/370 (63%), Gaps = 47/370 (12%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR 496
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV GS ++++
Sbjct: 19 AVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDCSCPERIVTVSGSRSAIYK 78
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF+LITK EE+ + G+ Q I +RLIVPASQCGS+IGKGGS+IK IRE +G
Sbjct: 79 AFTLITKKFEEWCSQFQDNANTQGKPQ-IPIRLIVPASQCGSLIGKGGSKIKEIREITGC 137
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
S+ VAS+MLPNSTER V + G +A+TQ IY IC +M++SPPKGATIPYRP PQ GP
Sbjct: 138 SIQVASEMLPNSTERAVTLSGSAEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VNGPV 196
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLA------------ALGLGGNSGG----GMGGGLN 660
++ N G ++ G + ++G+A A + N+GG G N
Sbjct: 197 IVAN--GQAYTIQGNYAVPAQEVSGIAKNPLAGLAALGLAGAIPSNTGGLNPTGKYSSPN 254
Query: 661 A------AALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVP 714
A AALAALA SQL+TN +NRN SQ + EMTVP
Sbjct: 255 ALEYIPHAALAALAGSQLRTN------------NNRNVAPVQSQ---------SHEMTVP 293
Query: 715 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
N+LIG +IGKGGTKI EIR+ISGAMIRIS E + + DRTIT+TG PD++ALAQYLIN
Sbjct: 294 NDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLIN 353
Query: 775 MSVELLRANL 784
M + + A +
Sbjct: 354 MRISMETAGM 363
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 186/361 (51%), Positives = 232/361 (64%), Gaps = 47/361 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV GS ++++AF+LITK
Sbjct: 28 MQGKEVGSIIGKKGEIVKRFREESGAKINISDCSCPERIVTVSGSRSAIYKAFTLITKKF 87
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ + G+ Q I +RLIVPASQCGS+IGKGGS+IK IRE +G S+ VAS+ML
Sbjct: 88 EEWCSQFQDNANTQGKPQ-IPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQVASEML 146
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + G +A+TQ IY IC +M++SPPKGATIPYRP PQ GP ++ N G
Sbjct: 147 PNSTERAVTLSGSAEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VNGPVIVAN--GQA 203
Query: 181 NSLMGAPDMGNNPLAGLA------------ALGLGGNSGG----GMGGGLNA------AA 218
++ G + ++G+A A + N+GG G NA AA
Sbjct: 204 YTIQGNYAVPAQEVSGIAKNPLAGLAALGLAGAIPSNTGGLNPTGKYSSPNALEYIPHAA 263
Query: 219 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 278
LAALA SQL+TN +NRN SQ + EMTVPN+LIG +IG
Sbjct: 264 LAALAGSQLRTN------------NNRNVAPVQSQ---------SHEMTVPNDLIGCIIG 302
Query: 279 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
KGGTKI EIR+ISGAMIRIS E + + DRTIT+TG PD++ALAQYLINM + + A
Sbjct: 303 KGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLINMRISMETAG 362
Query: 339 L 339
+
Sbjct: 363 M 363
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G A+ +
Sbjct: 22 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDCSCP---ERIVTVSGSRSAIYK 78
Query: 140 AIYQI 144
A I
Sbjct: 79 AFTLI 83
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 240/372 (64%), Gaps = 39/372 (10%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EE+ N +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEWCSQFND-VGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 140 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 198
Query: 618 IGN--QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK-- 673
+ N F +Q + P P+ LA + GG+ G++ A L + L+
Sbjct: 199 LANGQAFTIQGNY-AVPTQETCPVFPLAL------ATGGLHAGISGLADPLLKGAHLQGA 251
Query: 674 ----TNHMPRNQNQNQNQHNR-----------------NNRDGPSQKTNQQQNQITKEMT 712
+H+ + + +N N+ P+ + QQQ+ EMT
Sbjct: 252 IPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQH----EMT 307
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 772
V N+LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT++G PD++ALAQYL
Sbjct: 308 VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYL 367
Query: 773 INMSVELLRANL 784
INMSVEL +ANL
Sbjct: 368 INMSVELQKANL 379
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/364 (50%), Positives = 236/364 (64%), Gaps = 39/364 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ N +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEWCSQFND-VGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 206
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK------TNHM 232
+Q + P P+ LA + GG+ G++ A L + L+ +H+
Sbjct: 207 IQGNY-AVPTQETCPVFPLAL------ATGGLHAGISGLADPLLKGAHLQGAIPAHHHHL 259
Query: 233 PRNQNQNQNQHNR-----------------NNRDGPSQKTNQQQNQITKEMTVPNELIGA 275
+ + +N N+ P+ + QQQ+ EMTV N+LIG
Sbjct: 260 QQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQH----EMTVSNDLIGC 315
Query: 276 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELL 335
+IGKGGTKI EIR+ISGAMIRIS E E + DRTIT++G PD++ALAQYLINMSVEL
Sbjct: 316 IIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQ 375
Query: 336 RANL 339
+ANL
Sbjct: 376 KANL 379
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 11/63 (17%)
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRR 441
Q+LTKPGAL+AL++LSAL DLL + GN+ G G P GP +QTTGV R
Sbjct: 495 QLLTKPGALSALSNLSAL----DLLNLTT----LGNTNGAGANPGGP---PVQTTGVNRA 543
Query: 442 MRH 444
H
Sbjct: 544 KGH 546
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 137 VTQAIYQI 144
+ A I
Sbjct: 78 IFSAFTLI 85
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 582 VTQAIYQI 589
+ A I
Sbjct: 78 IFSAFTLI 85
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 11/59 (18%)
Query: 850 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 908
Q+LTKPGAL+AL++LSAL DLL + GN+ G G P GP +QTTGV R
Sbjct: 495 QLLTKPGALSALSNLSAL----DLLNLTT----LGNTNGAGANPGGP---PVQTTGVNR 542
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/350 (54%), Positives = 238/350 (68%), Gaps = 31/350 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ ++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTSAIFAA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+ +G S
Sbjct: 82 FTLITKKFEEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQNTGCS 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 140 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 198
Query: 618 IGN--QFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
+ N F +Q N + ++ NPLA LAALGL G + GG+N ALAALA SQL+T
Sbjct: 199 LANGQAFTIQGNYAVPTQEVSKNPLASLAALGLAGMTPAST-GGINHTALAALAGSQLRT 257
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ R Q Q QH EMTV N+LIG +IGKGGTKI EIR+
Sbjct: 258 ANANRAQ---QQQH---------------------EMTVSNDLIGCIIGKGGTKIAEIRQ 293
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 294 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 343
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/342 (55%), Positives = 234/342 (68%), Gaps = 31/342 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ ++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTSAIFAAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+ +G S+ VAS+ML
Sbjct: 90 EEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQNTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 206
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q N + ++ NPLA LAALGL G + GG+N ALAALA SQL+T + R Q
Sbjct: 207 IQGNYAVPTQEVSKNPLASLAALGLAGMTPAST-GGINHTALAALAGSQLRTANANRAQ- 264
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
Q QH EMTV N+LIG +IGKGGTKI EIR+ISGAMIRI
Sbjct: 265 --QQQH---------------------EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI 301
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
S E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 302 SNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 343
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 198/354 (55%), Positives = 245/354 (69%), Gaps = 37/354 (10%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EEF+ +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEFN-----DVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 135
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 136 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 194
Query: 618 IGN--QFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG----GLNAAALAALASS 670
+ N F +Q N + ++ NPLA LAALGL G + GG G AALAALA S
Sbjct: 195 LANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPAALAALAGS 254
Query: 671 QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
QL+T + P+ + QQQ+ EMTV N+LIG +IGKGGTKI
Sbjct: 255 QLRTAN-------------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIA 291
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
EIR+ISGAMIRIS E E + DRTIT++G PD++ALAQYLINMSVEL +ANL
Sbjct: 292 EIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 345
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 241/346 (69%), Gaps = 37/346 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EEF+ +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEFN-----DVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 143
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 144 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 202
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG----GLNAAALAALASSQLKTNHMP 233
+Q N + ++ NPLA LAALGL G + GG G AALAALA SQL+T +
Sbjct: 203 IQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPAALAALAGSQLRTAN-- 260
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGA
Sbjct: 261 -----------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGA 299
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
MIRIS E E + DRTIT++G PD++ALAQYLINMSVEL +ANL
Sbjct: 300 MIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 345
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 11/63 (17%)
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRR 441
Q+LTKPGAL+AL++LSAL DLL + GN+ G G P GP +QTTGV R
Sbjct: 461 QLLTKPGALSALSNLSAL----DLLNLTT----LGNTNGAGANPGGP---PVQTTGVNRA 509
Query: 442 MRH 444
H
Sbjct: 510 KGH 512
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 137 VTQAIYQI 144
+ A I
Sbjct: 78 IFSAFTLI 85
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 582 VTQAIYQI 589
+ A I
Sbjct: 78 IFSAFTLI 85
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 11/59 (18%)
Query: 850 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 908
Q+LTKPGAL+AL++LSAL DLL + GN+ G G P GP +QTTGV R
Sbjct: 461 QLLTKPGALSALSNLSAL----DLLNLTT----LGNTNGAGANPGGP---PVQTTGVNR 508
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 180/349 (51%), Positives = 234/349 (67%), Gaps = 13/349 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LI
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLI 85
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
TK EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VA
Sbjct: 86 TKKFEEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVA 143
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN- 620
S+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N
Sbjct: 144 SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANG 202
Query: 621 -QFGMQ-NSLMGAPDMGNNP---LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
F +Q N + ++ NP LA L G+ S GG+ +A AA + ++N
Sbjct: 203 QAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGELSASAARCQTDFQSN 262
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
++ P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+I
Sbjct: 263 LGSAPAALAALAGSQLRTANPANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQI 318
Query: 736 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
SGAMIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 319 SGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 367
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/345 (51%), Positives = 231/345 (66%), Gaps = 13/345 (3%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 206
Query: 179 MQ-NSLMGAPDMGNNP---LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR 234
+Q N + ++ NP LA L G+ S GG+ +A AA + ++N
Sbjct: 207 IQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGELSASAARCQTDFQSNLGSA 266
Query: 235 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
++ P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAM
Sbjct: 267 PAALAALAGSQLRTANPANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAM 322
Query: 295 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
IRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 323 IRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 367
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 192/396 (48%), Positives = 244/396 (61%), Gaps = 71/396 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVT+ GS +++++AFSLI
Sbjct: 15 LRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTISGSTEAIYKAFSLI 74
Query: 502 TKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+EEF + QN G + + LRLIVPASQCGS+IGKGG++IK IRE +GA + V
Sbjct: 75 CTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQV 134
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-- 618
ASD+LP STER V + G D++TQ I+ IC +MV+SPPKG TIPYR PQ G P ++
Sbjct: 135 ASDVLPQSTERAVTLTGTRDSITQCIFHICAVMVESPPKGVTIPYRAKPQ-MGAPVILAG 193
Query: 619 GNQFGMQNS-----------LMG-----APDMGNNPLAGLAA-LGL-------------G 648
G F + ++ ++G AP + P G AA LGL G
Sbjct: 194 GQAFTLASAGSAAGCDVGTMMVGGGPYNAPMLMVPPSPGAAASLGLIDPLDYPLLKNAFG 253
Query: 649 GNSGGGMGG-------------------GLNAAALAALASSQLKTNHMPRNQNQNQNQHN 689
+ G + G N AALAALA SQL++ N + N
Sbjct: 254 PSQLGKLTGNPLAGLAALGLGSLGGPANSFNPAALAALAGSQLRS---------NGSGAN 304
Query: 690 RNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 749
N+R G Q+T+ EMTVPN+LIG +IGKGGTKI EIR+ISGAMIRIS + E
Sbjct: 305 INSRSGGGQQTH--------EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDRE 356
Query: 750 -EDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
S DRTIT+TG PD++ALAQYLINMS+E+ RA++
Sbjct: 357 GSASTDRTITITGNPDSVALAQYLINMSLEIQRASM 392
Score = 308 bits (789), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 190/392 (48%), Positives = 241/392 (61%), Gaps = 71/392 (18%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVT+ GS +++++AFSLI +
Sbjct: 19 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTISGSTEAIYKAFSLICTKV 78
Query: 61 EEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EEF + QN G + + LRLIVPASQCGS+IGKGG++IK IRE +GA + VASD+
Sbjct: 79 EEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVASDV 138
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQF 177
LP STER V + G D++TQ I+ IC +MV+SPPKG TIPYR PQ G P ++ G F
Sbjct: 139 LPQSTERAVTLTGTRDSITQCIFHICAVMVESPPKGVTIPYRAKPQ-MGAPVILAGGQAF 197
Query: 178 GMQNS-----------LMG-----APDMGNNPLAGLAA-LGL-------------GGNSG 207
+ ++ ++G AP + P G AA LGL G +
Sbjct: 198 TLASAGSAAGCDVGTMMVGGGPYNAPMLMVPPSPGAAASLGLIDPLDYPLLKNAFGPSQL 257
Query: 208 GGMGG-------------------GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNR 248
G + G N AALAALA SQL++ N + N N+R
Sbjct: 258 GKLTGNPLAGLAALGLGSLGGPANSFNPAALAALAGSQLRS---------NGSGANINSR 308
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDS 307
G Q+T+ EMTVPN+LIG +IGKGGTKI EIR+ISGAMIRIS + E S
Sbjct: 309 SGGGQQTH--------EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSAS 360
Query: 308 NDRTITMTGTPDAIALAQYLINMSVELLRANL 339
DRTIT+TG PD++ALAQYLINMS+E+ RA++
Sbjct: 361 TDRTITITGNPDSVALAQYLINMSLEIQRASM 392
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRLI+ + GSIIGK G +K RE SGA + ++ P ER V I G +A+ +
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTISGSTEAIYK 69
Query: 140 AIYQIC 145
A IC
Sbjct: 70 AFSLIC 75
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 308 bits (789), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 192/350 (54%), Positives = 241/350 (68%), Gaps = 33/350 (9%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LI
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLI 85
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
TK EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VA
Sbjct: 86 TKKFEEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVA 143
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN- 620
S+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N
Sbjct: 144 SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANG 202
Query: 621 -QFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG----GLNAAALAALASSQLKT 674
F +Q N + ++ NPLA LAALGL G + GG G AALAALA SQL+T
Sbjct: 203 QAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPAALAALAGSQLRT 262
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+
Sbjct: 263 AN-------------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQ 299
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 300 ISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 349
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 238/346 (68%), Gaps = 33/346 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +Q +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEWC-SQFNDVGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 206
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG----GLNAAALAALASSQLKTNHMP 233
+Q N + ++ NPLA LAALGL G + GG G AALAALA SQL+T +
Sbjct: 207 IQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPAALAALAGSQLRTAN-- 264
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGA
Sbjct: 265 -----------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGA 303
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
MIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 304 MIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 349
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 190/396 (47%), Positives = 240/396 (60%), Gaps = 71/396 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVT+ GS +++++AFSLI
Sbjct: 15 LRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTISGSTEAIYKAFSLI 74
Query: 502 TKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+EEF + QN G + + LRLIVPASQCGS+IGKGG++IK IRE +GA + V
Sbjct: 75 CTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQV 134
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-- 618
ASD+LP STER V + G D++TQ I+ IC +MV+SPPKG TIPYR PQ G P ++
Sbjct: 135 ASDVLPQSTERAVTLTGTRDSITQCIFHICAVMVESPPKGVTIPYRAKPQ-MGAPVILAG 193
Query: 619 GNQFGMQNS-----------LMG-----APDMGNNPLAGLAA-LGL-------------G 648
G F + ++ ++G AP + P G AA LGL G
Sbjct: 194 GQAFTLASAGSAAGCDVGTMMVGGGPYNAPMLMVPPSPGAAASLGLIDPLDYPLLKNAFG 253
Query: 649 GNSGGGMGG-------------------GLNAAALAALASSQLKTNHMPRNQNQNQNQHN 689
+ G + G N AALAALA SQL++N + N
Sbjct: 254 PSQLGKLTGNPLAGLAALGLGSLGGPANSFNPAALAALAGSQLRSNG---------SGAN 304
Query: 690 RNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 749
N+R G Q+T+ EMTVPN+LIG +IGKGGTKI EIR+ISGAMIRIS + E
Sbjct: 305 INSRSGGGQQTH--------EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDRE 356
Query: 750 -EDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
S DRTIT+TG PD++ALAQYLINM + + A L
Sbjct: 357 GSASTDRTITITGNPDSVALAQYLINMRISMETAGL 392
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 188/392 (47%), Positives = 237/392 (60%), Gaps = 71/392 (18%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVT+ GS +++++AFSLI +
Sbjct: 19 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTISGSTEAIYKAFSLICTKV 78
Query: 61 EEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EEF + QN G + + LRLIVPASQCGS+IGKGG++IK IRE +GA + VASD+
Sbjct: 79 EEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVASDV 138
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQF 177
LP STER V + G D++TQ I+ IC +MV+SPPKG TIPYR PQ G P ++ G F
Sbjct: 139 LPQSTERAVTLTGTRDSITQCIFHICAVMVESPPKGVTIPYRAKPQ-MGAPVILAGGQAF 197
Query: 178 GMQNS-----------LMG-----APDMGNNPLAGLAA-LGL-------------GGNSG 207
+ ++ ++G AP + P G AA LGL G +
Sbjct: 198 TLASAGSAAGCDVGTMMVGGGPYNAPMLMVPPSPGAAASLGLIDPLDYPLLKNAFGPSQL 257
Query: 208 GGMGG-------------------GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNR 248
G + G N AALAALA SQL++N + N N+R
Sbjct: 258 GKLTGNPLAGLAALGLGSLGGPANSFNPAALAALAGSQLRSNG---------SGANINSR 308
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDS 307
G Q+T+ EMTVPN+LIG +IGKGGTKI EIR+ISGAMIRIS + E S
Sbjct: 309 SGGGQQTH--------EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSAS 360
Query: 308 NDRTITMTGTPDAIALAQYLINMSVELLRANL 339
DRTIT+TG PD++ALAQYLINM + + A L
Sbjct: 361 TDRTITITGNPDSVALAQYLINMRISMETAGL 392
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRLI+ + GSIIGK G +K RE SGA + ++ P ER V I G +A+ +
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTISGSTEAIYK 69
Query: 140 AIYQIC 145
A IC
Sbjct: 70 AFSLIC 75
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/400 (45%), Positives = 235/400 (58%), Gaps = 60/400 (15%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EE+ N +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEWCSQFND-VGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP +
Sbjct: 140 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVI 198
Query: 618 IGN--QFGMQ------------------------------------------------NS 627
+ N F +Q +
Sbjct: 199 LANGQAFTIQGNYAVPTQETCPVFPLALATGGLHAGISGLADPLLKGAHLQGAIPAHHHH 258
Query: 628 LMGAPDMGNNP---LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 684
L PD+ NP LA L G+ S GG+ +A AA + ++N
Sbjct: 259 LQQMPDVAKNPLASLAALGLAGMNPASTGGINHTGELSASAARCQTDFQSNLGSAPAALA 318
Query: 685 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
++ P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAMIRIS
Sbjct: 319 ALAGSQLRTANPANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 374
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 375 CEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 414
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 180/392 (45%), Positives = 231/392 (58%), Gaps = 60/392 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ N +G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEWCSQFND-VGKVGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN--QFG 178
PNSTER V + G + +TQ IYQICL+M++SPP+GATIPYRP PQ GP ++ N F
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQ-VTGPVILANGQAFT 206
Query: 179 MQ------------------------------------------------NSLMGAPDMG 190
+Q + L PD+
Sbjct: 207 IQGNYAVPTQETCPVFPLALATGGLHAGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVA 266
Query: 191 NNP---LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNN 247
NP LA L G+ S GG+ +A AA + ++N ++
Sbjct: 267 KNPLASLAALGLAGMNPASTGGINHTGELSASAARCQTDFQSNLGSAPAALAALAGSQLR 326
Query: 248 RDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 307
P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAMIRIS E E +
Sbjct: 327 TANPANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGN 382
Query: 308 NDRTITMTGTPDAIALAQYLINMSVELLRANL 339
DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 383 TDRTITISGNPDSVALAQYLINMRISMETAGL 414
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 137 VTQAIYQI 144
+ A I
Sbjct: 78 IFSAFTLI 85
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 582 VTQAIYQI 589
+ A I
Sbjct: 78 IFSAFTLI 85
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 197/355 (55%), Positives = 244/355 (68%), Gaps = 33/355 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE VK+ REESG++I ISD S PERIVT+ G+ D++F+A
Sbjct: 16 VTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDGSCPERIVTITGTTDAIFKA 75
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
F+LI K +EE L G + I LRLI+PASQCGS+IGKGGS+IK IRE +GA
Sbjct: 76 FNLICKKLEE---EVGGPLAGTAIPRPPITLRLIMPASQCGSLIGKGGSKIKEIREITGA 132
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
SV VAS+MLPNSTER V + G DA+TQ IY IC +M++SPPKGATIPYRP PQ GGP
Sbjct: 133 SVVVASEMLPNSTERAVTVSGTSDAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPV 191
Query: 617 LI--GNQFGMQ--NSLMGAPDMGN---NPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
++ G + +Q ++ PDM NPLA LAALGLGG +G G GG +NA+ALAALA
Sbjct: 192 ILAGGQAYTIQGNYAVPATPDMNKLSGNPLANLAALGLGGLTGTGGGGSMNASALAALAG 251
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
SQL R+ G Q QQ+Q EM VPNELIG +IGKGGTKI
Sbjct: 252 SQL-----------------RSGGGGGPQSGAPQQSQ---EMAVPNELIGCIIGKGGTKI 291
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
EIR+ISGAMIRIS + E+ E S++RTIT+TGT +++ALAQYLIN + + A +
Sbjct: 292 AEIRQISGAMIRIS-NCEDRESSSERTITITGTAESVALAQYLINTRLAMETAAM 345
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 240/347 (69%), Gaps = 33/347 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE VK+ REESG++I ISD S PERIVT+ G+ D++F+AF+LI K +
Sbjct: 24 MAGKEVGSIIGKKGEIVKRFREESGARINISDGSCPERIVTITGTTDAIFKAFNLICKKL 83
Query: 61 EEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EE L G + I LRLI+PASQCGS+IGKGGS+IK IRE +GASV VAS+M
Sbjct: 84 EE---EVGGPLAGTAIPRPPITLRLIMPASQCGSLIGKGGSKIKEIREITGASVVVASEM 140
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQF 177
LPNSTER V + G DA+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++ G +
Sbjct: 141 LPNSTERAVTVSGTSDAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPVILAGGQAY 199
Query: 178 GMQ--NSLMGAPDMGN---NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+Q ++ PDM NPLA LAALGLGG +G G GG +NA+ALAALA SQL
Sbjct: 200 TIQGNYAVPATPDMNKLSGNPLANLAALGLGGLTGTGGGGSMNASALAALAGSQL----- 254
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
R+ G Q QQ+Q EM VPNELIG +IGKGGTKI EIR+ISG
Sbjct: 255 ------------RSGGGGGPQSGAPQQSQ---EMAVPNELIGCIIGKGGTKIAEIRQISG 299
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
AMIRIS + E+ E S++RTIT+TGT +++ALAQYLIN + + A +
Sbjct: 300 AMIRIS-NCEDRESSSERTITITGTAESVALAQYLINTRLAMETAAM 345
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 68 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 127
+K L + S + +RL++ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 6 SKGLPHDAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDGSCP---ERI 62
Query: 128 VNIKGVPDAVTQAIYQICLIM---VDSPPKGATIPYRPL 163
V I G DA+ +A IC + V P G IP P+
Sbjct: 63 VTITGTTDAIFKAFNLICKKLEEEVGGPLAGTAIPRPPI 101
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 513 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 572
+K L + S + +RL++ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 6 SKGLPHDAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDGSCP---ERI 62
Query: 573 VNIKGVPDAVTQAIYQICLIM---VDSPPKGATIPYRPL 608
V I G DA+ +A IC + V P G IP P+
Sbjct: 63 VTITGTTDAIFKAFNLICKKLEEEVGGPLAGTAIPRPPI 101
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 180/361 (49%), Positives = 227/361 (62%), Gaps = 49/361 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK G+ +KK REESG+KI ISD S PERIVTV GS +++ +A
Sbjct: 72 VTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEAILKA 131
Query: 498 FSLITKNIEEFHK----------NQNKHLGGNGESQL----IQLRLIVPASQCGSIIGKG 543
FSLI + EE + L NG S L + LRLIVPASQCGS+IGKG
Sbjct: 132 FSLIARKFEEMLSLLCLPVQTVGPTLQELQSNG-SHLPKPPVTLRLIVPASQCGSLIGKG 190
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
GS+IK IRE +GAS+ VAS+MLPNSTER V + G +A+T+ IYQIC +M++SPPKGATI
Sbjct: 191 GSKIKEIREVTGASIQVASEMLPNSTERAVTVSGTAEAITKCIYQICCVMMESPPKGATI 250
Query: 604 PYRPLPQNAGGPGLI---GNQFGMQNSL-MGAPDMGN-NPLAGLAALGLGGNSGGGMGGG 658
PYRP P P +I G + +Q + PD+ + LA A L G+S G
Sbjct: 251 PYRPKP---AMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAPLLPGHS----VGA 303
Query: 659 LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELI 718
+N ALAALA++ N R + + T EMT+PN+LI
Sbjct: 304 INPQALAALATTN-------------------NLRPNTAAAAIATASTTTTEMTIPNDLI 344
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
G +IGKGG+KI EIR++SGA I+IS S EE S DRT+T++GTP+AI LAQYLIN S+E
Sbjct: 345 GCIIGKGGSKINEIRQLSGATIKISNS---EEGSKDRTVTISGTPEAINLAQYLINTSME 401
Query: 779 L 779
L
Sbjct: 402 L 402
Score = 288 bits (738), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 177/353 (50%), Positives = 223/353 (63%), Gaps = 49/353 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK G+ +KK REESG+KI ISD S PERIVTV GS +++ +AFSLI +
Sbjct: 80 MQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEAILKAFSLIARKF 139
Query: 61 EEFHK----------NQNKHLGGNGESQL----IQLRLIVPASQCGSIIGKGGSQIKTIR 106
EE + L NG S L + LRLIVPASQCGS+IGKGGS+IK IR
Sbjct: 140 EEMLSLLCLPVQTVGPTLQELQSNG-SHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIR 198
Query: 107 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN 166
E +GAS+ VAS+MLPNSTER V + G +A+T+ IYQIC +M++SPPKGATIPYRP P
Sbjct: 199 EVTGASIQVASEMLPNSTERAVTVSGTAEAITKCIYQICCVMMESPPKGATIPYRPKP-- 256
Query: 167 AGGPGLI---GNQFGMQNSL-MGAPDMGN-NPLAGLAALGLGGNSGGGMGGGLNAAALAA 221
P +I G + +Q + PD+ + LA A L G+S G +N ALAA
Sbjct: 257 -AMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAPLLPGHS----VGAINPQALAA 311
Query: 222 LASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 281
LA++ N R + + T EMT+PN+LIG +IGKGG
Sbjct: 312 LATTN-------------------NLRPNTAAAAIATASTTTTEMTIPNDLIGCIIGKGG 352
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVEL 334
+KI EIR++SGA I+IS S EE S DRT+T++GTP+AI LAQYLIN S+EL
Sbjct: 353 SKINEIRQLSGATIKISNS---EEGSKDRTVTISGTPEAINLAQYLINTSMEL 402
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+G S + +RLI+ + GSIIGK G IK RE SGA + ++ P ER V + G
Sbjct: 68 DGPSVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCP---ERIVTVTGS 124
Query: 134 PDAVTQAIYQI 144
+A+ +A I
Sbjct: 125 TEAILKAFSLI 135
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+G S + +RLI+ + GSIIGK G IK RE SGA + ++ P ER V + G
Sbjct: 68 DGPSVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCP---ERIVTVTGS 124
Query: 579 PDAVTQAIYQI 589
+A+ +A I
Sbjct: 125 TEAILKAFSLI 135
>gi|328724001|ref|XP_001949471.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 443
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 193/442 (43%), Positives = 261/442 (59%), Gaps = 66/442 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
+EV ++IGK GE+ SG+K+ IS T E IV++ G+ +++ +A LI +EEF
Sbjct: 37 REVRNVIGKGGES-------SGAKVLISGGQTRESIVSITGTTNAICKATELIGLKVEEF 89
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
+ QN G + L+LIVP SQCG IIGKGG +IK IRE+SGA++ VA DMLPNS
Sbjct: 90 FERQN------GPKAFLTLKLIVPISQCGFIIGKGGCKIKEIRESSGAAIQVALDMLPNS 143
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG-GPGLIGNQFGMQNS 182
TER V+I G ++Q +YQ+C ++++SP + ATIPY P + G +G FG Q
Sbjct: 144 TERLVSITGTTGTISQCVYQVCNVILNSPSRKATIPYDPRRKTLGFASSAVGTDFGRQCI 203
Query: 183 LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQ 242
NPLA LAALGLG S G +N A LAALA SQL+T
Sbjct: 204 ---------NPLASLAALGLGTVS----TGSINPATLAALAGSQLRTG------------ 238
Query: 243 HNRNNRDGPSQKTNQ--QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
NR NR+G + NQ N T MTVPN LIG VIG+ G+KI EI+++SGA++ I+K
Sbjct: 239 -NRQNRNGGGEHKNQNSNSNSETISMTVPNVLIGCVIGRRGSKIAEIKQLSGALVYIAKG 297
Query: 301 SEEEE--DSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNL 358
E ++ DR IT+TG D+I++A+YLI MSVEL +ANL EG S+ D S + L
Sbjct: 298 ERTHENGENEDRQITITGNKDSISVAKYLIEMSVELQKANL--EGANSSSSPDDESSSAL 355
Query: 359 PSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNS 418
P+ + A++PL++A+ LA++ KPG +NAL+SLSALGGL+D LG
Sbjct: 356 PTPPTV----AASPLSSAI-TLAELFAKPGVINALSSLSALGGLTDFLG----------- 399
Query: 419 GGFGGVPQGPNYANIQTTGVQR 440
FG P +QTTG R
Sbjct: 400 ALFGANQSSP----MQTTGFHR 417
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 198/476 (41%), Positives = 267/476 (56%), Gaps = 89/476 (18%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V+ MR ++ +EV ++IGK GE+ SG+K+ IS T E IV++ G+ +++ +A
Sbjct: 26 VKLTMRILIDRREVRNVIGKGGES-------SGAKVLISGGQTRESIVSITGTTNAICKA 78
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
LI +EEF + QN G + L+LIVP SQCG IIGKGG +IK IRE+SGA+
Sbjct: 79 TELIGLKVEEFFERQN------GPKAFLTLKLIVPISQCGFIIGKGGCKIKEIRESSGAA 132
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG-GPG 616
+ VA DMLPNSTER V+I G ++Q +YQ+C ++++SP + ATIPY P + G
Sbjct: 133 IQVALDMLPNSTERLVSITGTTGTISQCVYQVCNVILNSPSRKATIPYDPRRKTLGFASS 192
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
+G FG Q NPLA LAALGLG S G +N A LAALA SQL+T
Sbjct: 193 AVGTDFGRQCI---------NPLASLAALGLGTVS----TGSINPATLAALAGSQLRTG- 238
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQ--QQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
NR NR+G + NQ N T MTVPN LIG VIG+ G+KI EI++
Sbjct: 239 ------------NRQNRNGGGEHKNQNSNSNSETISMTVPNVLIGCVIGRRGSKIAEIKQ 286
Query: 735 ISGAMIRISKSSEEEE--DSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 792
+SGA++ I+K E ++ DR IT+TG D+I++A+YLI MSVEL +ANL EG S
Sbjct: 287 LSGALVYIAKGERTHENGENEDRQITITGNKDSISVAKYLIEMSVELQKANL--EGANSS 344
Query: 793 NMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPAGLNASNPLAAALPQLAQIL 852
+ D S + LP+ P AA +PL++A+ LA++
Sbjct: 345 SSPDDESSSALPTP----------PTVAA-----------------SPLSSAI-TLAELF 376
Query: 853 TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 908
KPG +NAL+SLSALGGL+D LG FG P +QTTG R
Sbjct: 377 AKPGVINALSSLSALGGLTDFLG-----------ALFGANQSSP----MQTTGFHR 417
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 218/347 (62%), Gaps = 57/347 (16%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F A
Sbjct: 22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSA 81
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+LITK EE+ +Q G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S
Sbjct: 82 FTLITKKFEEWC-SQFNDAGKIGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCS 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V + G + +TQ IYQICL+M++S P+
Sbjct: 140 IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESCPRST---------------- 183
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
+ NPLA LAALGL G + GG + AALAALA SQL+T
Sbjct: 184 ----------------VAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRT--- 224
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
N NR QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISG
Sbjct: 225 -------ANAANR---------AQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISG 264
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
AMIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 265 AMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 311
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/339 (51%), Positives = 214/339 (63%), Gaps = 57/339 (16%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +Q G G++Q I +RLIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+ML
Sbjct: 90 EEWC-SQFNDAGKIGKTQ-IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + G + +TQ IYQICL+M++S P+
Sbjct: 148 PNSTERAVTLSGSAEQITQCIYQICLVMLESCPRST------------------------ 183
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
+ NPLA LAALGL G + GG + AALAALA SQL+T
Sbjct: 184 --------VAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRT----------A 225
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
N NR QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAMIRIS
Sbjct: 226 NAANR---------AQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNC 272
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 273 EEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 311
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 60/254 (23%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
+ QI + VP G++IGK G+KI EIR+ +G I+++ SE +S +R +T++G+
Sbjct: 104 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVA--SEMLPNSTERAVTLSGSA 161
Query: 319 DAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALP 378
+ I Y I + + S P + + A NPLA+
Sbjct: 162 EQITQCIYQICLV--------------------------MLESCPRSTV-AKNPLASLAA 194
Query: 379 QLAQIL--TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTT 436
+ G +N +L+AL G S L AN
Sbjct: 195 LGLAGMNPASTGGINHTAALAALAG-SQL-----------------------RTANAANR 230
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPE-----RIVTVIGSM 491
Q++ + +G IIGK G + ++R+ SG+ I IS+ E R +T+ G+
Sbjct: 231 AQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNP 290
Query: 492 DSLFRAFSLITKNI 505
DS+ A LI I
Sbjct: 291 DSVALAQYLINMRI 304
Score = 39.7 bits (91), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 137 -------VTQAIYQICLIMVDSPPKGAT-IPYRPLPQNAGGPGLIG 174
+T+ + C D+ G T IP R + + LIG
Sbjct: 78 IFSAFTLITKKFEEWCSQFNDAGKIGKTQIPIRLIVPASQCGSLIG 123
Score = 39.7 bits (91), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 582 -------VTQAIYQICLIMVDSPPKGAT-IPYRPLPQNAGGPGLIG 619
+T+ + C D+ G T IP R + + LIG
Sbjct: 78 IFSAFTLITKKFEEWCSQFNDAGKIGKTQIPIRLIVPASQCGSLIG 123
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/344 (46%), Positives = 210/344 (61%), Gaps = 44/344 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGK+VGSIIGK G+T+K+ REESG++I ISD S+PERIVT+ GS +++ +A
Sbjct: 18 VTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDGSSPERIVTITGSTENILKA 77
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I K EE K H+ + + LRLIVPASQCGS+IGKGGS+IK IRE +GAS
Sbjct: 78 FNMIGKKFEEDMKA--AHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSKIKEIREVTGAS 135
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VA DMLPNSTER V + G PDA++Q +Y IC +M++SPPKGATIPY+P P +
Sbjct: 136 IQVAGDMLPNSTERAVTVSGTPDAISQCVYHICCVMLESPPKGATIPYKPRPASG----- 190
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
S G L L L L G L AA ++T
Sbjct: 191 --------TSTSGPVVFAGGQLTKLHQLALQQTPYITPGTTLPAALATQFG---VQTASQ 239
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
P N PS +T+ E+T+PNELIG +IGKGG KI EIR+ SG
Sbjct: 240 PGN---------------PSSQTH--------ELTIPNELIGCIIGKGGCKINEIRQCSG 276
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLR 781
A I+I+ +E S DR +T+TGTP++I++AQ+LIN S+EL +
Sbjct: 277 ATIKIAGM---QEGSTDRQVTITGTPESISMAQFLINTSLELAK 317
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 206/336 (61%), Gaps = 44/336 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGK+VGSIIGK G+T+K+ REESG++I ISD S+PERIVT+ GS +++ +AF++I K
Sbjct: 26 MQGKDVGSIIGKKGDTIKRFREESGARINISDGSSPERIVTITGSTENILKAFNMIGKKF 85
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE K H+ + + LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VA DML
Sbjct: 86 EEDMKA--AHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAGDML 143
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + G PDA++Q +Y IC +M++SPPKGATIPY+P P +
Sbjct: 144 PNSTERAVTVSGTPDAISQCVYHICCVMLESPPKGATIPYKPRPASG------------- 190
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
S G L L L L G L AA ++T P N
Sbjct: 191 TSTSGPVVFAGGQLTKLHQLALQQTPYITPGTTLPAALATQFG---VQTASQPGN----- 242
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
PS +T+ E+T+PNELIG +IGKGG KI EIR+ SGA I+I+
Sbjct: 243 ----------PSSQTH--------ELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGM 284
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLR 336
+E S DR +T+TGTP++I++AQ+LIN S+EL +
Sbjct: 285 ---QEGSTDRQVTITGTPESISMAQFLINTSLELAK 317
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+NK + G S + +RLI+ GSIIGK G IK RE SGA + ++ +S E
Sbjct: 7 TENK-VPGEAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDG---SSPE 62
Query: 126 REVNIKGVPDAVTQAIYQI 144
R V I G + + +A I
Sbjct: 63 RIVTITGSTENILKAFNMI 81
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 511 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 570
+NK + G S + +RLI+ GSIIGK G IK RE SGA + ++ +S E
Sbjct: 7 TENK-VPGEAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDG---SSPE 62
Query: 571 REVNIKGVPDAVTQAIYQI 589
R V I G + + +A I
Sbjct: 63 RIVTITGSTENILKAFNMI 81
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 211/340 (62%), Gaps = 18/340 (5%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAFKFEEDINNSMTNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G+PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGMPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD A L + L + A SSQLK
Sbjct: 189 FAGGQAYTIQGQCAIPHPD---------DACLLSAEYKTALTSTLWRSPQLAHPSSQLKE 239
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ + + N + + + T E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 240 AAWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQ 299
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ ++ E S +R IT+TG+P I+LAQYLIN
Sbjct: 300 MSGAQIKIANAT---EGSTERQITITGSPANISLAQYLIN 336
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 207/332 (62%), Gaps = 18/332 (5%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAFKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDINNSMTNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G+PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGMPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPVIFAGGQAYT 196
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD A L + L + A SSQLK
Sbjct: 197 IQGQCAIPHPD---------DACLLSAEYKTALTSTLWRSPQLAHPSSQLKEAAWRPESL 247
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ + + N + + + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 248 RGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 307
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ ++ E S +R IT+TG+P I+LAQYLIN
Sbjct: 308 ANAT---EGSTERQITITGSPANISLAQYLIN 336
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQICL 146
A I
Sbjct: 71 AFAMIAF 77
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 166/360 (46%), Positives = 212/360 (58%), Gaps = 38/360 (10%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR 496
V +R IMQGKEVGSIIGK GET+KK RE+SG++I ISDSS ERIVTV GS +++
Sbjct: 16 AVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDSSCAERIVTVTGSTEAINN 75
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF +ITK EE N + + LRL+VPASQCGS+IGKGGS+IK IRE +GA
Sbjct: 76 AFEMITKKFEE--DVSNNMANSSTPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRENTGA 133
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
SV VA DML STER V I G P+A+T+ +YQIC +M++SPPKGATIPYRP P NA
Sbjct: 134 SVQVAGDMLHQSTERAVTISGTPEAITKCVYQICCVMLESPPKGATIPYRPKPTNA---- 189
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL--KT 674
A A + GN + L + L +T
Sbjct: 190 ----------------------TATHPAYAVHGNYAVPYPDFMKLHHLTMQHTPFLPGQT 227
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P N N + T QQ T E+ +PN+LIG VIG+GG KI EIR+
Sbjct: 228 PFTPTALNMGYGVANAASAGTQVATTGQQ----TYEIMIPNDLIGCVIGRGGAKINEIRQ 283
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNM 794
ISGA I+I+ S +E SNDR++T++GT +AI LA +LIN S+EL + NL E ++N+
Sbjct: 284 ISGATIKIANS---QEGSNDRSVTISGTVEAINLAHFLINSSLELAK-NLAPELAAKANL 339
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 163/351 (46%), Positives = 208/351 (59%), Gaps = 38/351 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GET+KK RE+SG++I ISDSS ERIVTV GS +++ AF +ITK
Sbjct: 25 MQGKEVGSIIGKGGETIKKFREQSGARINISDSSCAERIVTVTGSTEAINNAFEMITKKF 84
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPASQCGS+IGKGGS+IK IRE +GASV VA DML
Sbjct: 85 EE--DVSNNMANSSTPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRENTGASVQVAGDML 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
STER V I G P+A+T+ +YQIC +M++SPPKGATIPYRP P NA
Sbjct: 143 HQSTERAVTISGTPEAITKCVYQICCVMLESPPKGATIPYRPKPTNA------------- 189
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL--KTNHMPRNQNQ 238
A A + GN + L + L +T P N
Sbjct: 190 -------------TATHPAYAVHGNYAVPYPDFMKLHHLTMQHTPFLPGQTPFTPTALNM 236
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
N + T QQ T E+ +PN+LIG VIG+GG KI EIR+ISGA I+I+
Sbjct: 237 GYGVANAASAGTQVATTGQQ----TYEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIA 292
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNM 349
S +E SNDR++T++GT +AI LA +LIN S+EL + NL E ++N+
Sbjct: 293 NS---QEGSNDRSVTISGTVEAINLAHFLINSSLELAK-NLAPELAAKANL 339
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 26/247 (10%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA ++++ + S +R +T++GTP+AI
Sbjct: 102 VTLRLVVPASQCGSLIGKGGSKIKEIRENTGASVQVA--GDMLHQSTERAVTISGTPEAI 159
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
Y I +L + G +P A++P A A
Sbjct: 160 TKCVYQI--CCVMLESPPKGA--------------TIPYRPKPTNATATHPAYAVHGNYA 203
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRR 441
L+ LT + L G + + + G+G + TTG Q+
Sbjct: 204 VPYPDFMKLHHLTMQH-----TPFLPGQTPFTPTALNMGYGVANAASAGTQVATTG-QQT 257
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
++ +G +IG+ G + ++R+ SG+ I I++S + +R VT+ G+++++ A
Sbjct: 258 YEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQEGSNDRSVTISGTVEAINLAHF 317
Query: 500 LITKNIE 506
LI ++E
Sbjct: 318 LINSSLE 324
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 128
K + +G + + +RLI+ + GSIIGKGG IK RE SGA + ++ + ER V
Sbjct: 8 KKMANDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS---SCAERIV 64
Query: 129 NIKGVPDAVTQAIYQI 144
+ G +A+ A I
Sbjct: 65 TVTGSTEAINNAFEMI 80
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 573
K + +G + + +RLI+ + GSIIGKGG IK RE SGA + ++ + ER V
Sbjct: 8 KKMANDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS---SCAERIV 64
Query: 574 NIKGVPDAVTQAIYQI 589
+ G +A+ A I
Sbjct: 65 TVTGSTEAINNAFEMI 80
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/396 (44%), Positives = 229/396 (57%), Gaps = 44/396 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IMQGKEVGSIIGK G+ +KK RE+SG+KI ISD S PERIVTV G+ + + +AF++I
Sbjct: 14 VRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGSCPERIVTVTGTTECIHKAFTMI 73
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
K EE +N + LRL+VPASQCGS+IGKGGS+IK IRET+GAS+ VA
Sbjct: 74 CKKFEEDLQNTP-----TVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQVA 128
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQ-----NAGG-- 614
S+MLPNSTER V + G DA+T I IC IM++SPPKGATI YRP P AGG
Sbjct: 129 SEMLPNSTERAVTVSGTADAITLCIQNICSIMLESPPKGATIQYRPKPVVPPVIFAGGQA 188
Query: 615 ---PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ 671
PG + + +G P M L+ L L LG + S Q
Sbjct: 189 YTVPGQMQGVQASEKERLGIPKME---LSKLHQLSLG-----------QPIPIIPCTSPQ 234
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFE 731
L MP + N + QQ Q T EM +PN+LIG +IG+GG KI E
Sbjct: 235 LIQATMPGLPHMAAAYPRATNTVPQALPAQPQQQQTTTEMAIPNDLIGCIIGRGGQKINE 294
Query: 732 IRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGE 791
IR++SGAMI+IS + EE + DR +T+TGTP+ I LAQYLIN S+EL +
Sbjct: 295 IRQMSGAMIKISNA---EEGAPDRKVTITGTPETIGLAQYLINTSMELHKT--------- 342
Query: 792 SNMDDFSSDNNLPSSAPLAGLNASN-PLAAALPQLA 826
+D SS N ++ L + + + P+A + QLA
Sbjct: 343 LTLDPSSSTQN--TTPTLTSVQSQHAPMAIPISQLA 376
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 185/423 (43%), Positives = 240/423 (56%), Gaps = 49/423 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK G+ +KK RE+SG+KI ISD S PERIVTV G+ + + +AF++I K
Sbjct: 18 MQGKEVGSIIGKKGDNIKKFREDSGAKINISDGSCPERIVTVTGTTECIHKAFTMICKKF 77
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE +N + LRL+VPASQCGS+IGKGGS+IK IRET+GAS+ VAS+ML
Sbjct: 78 EEDLQNTP-----TVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQVASEML 132
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQ-----NAGG-----P 170
PNSTER V + G DA+T I IC IM++SPPKGATI YRP P AGG P
Sbjct: 133 PNSTERAVTVSGTADAITLCIQNICSIMLESPPKGATIQYRPKPVVPPVIFAGGQAYTVP 192
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
G + + +G P M L+ L L LG + S QL
Sbjct: 193 GQMQGVQASEKERLGIPKME---LSKLHQLSLG-----------QPIPIIPCTSPQLIQA 238
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
MP + N + QQ Q T EM +PN+LIG +IG+GG KI EIR++
Sbjct: 239 TMPGLPHMAAAYPRATNTVPQALPAQPQQQQTTTEMAIPNDLIGCIIGRGGQKINEIRQM 298
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMD 350
SGAMI+IS + EE + DR +T+TGTP+ I LAQYLIN S+EL + +D
Sbjct: 299 SGAMIKISNA---EEGAPDRKVTITGTPETIGLAQYLINTSMELHKT---------LTLD 346
Query: 351 DFSSDNNLPSSAPLAGLNASN-PLAAALPQLAQILTKPGAL--NALTSLSALGGLSDLLG 407
SS N ++ L + + + P+A + QLA KP + N L ++ L G+S L
Sbjct: 347 PSSSTQN--TTPTLTSVQSQHAPMAIPISQLAM---KPMIVGYNGLNGIAGLNGISHGLN 401
Query: 408 GGS 410
G S
Sbjct: 402 GLS 404
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
L+ +R+I+ + GSIIGK G IK RE SGA + ++ P ER V + G + +
Sbjct: 11 LLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGSCP---ERIVTVTGTTECIH 67
Query: 139 QAIYQICLIMVDSPPKGATIPYRPL 163
+A IC + T+P P+
Sbjct: 68 KAFTMICKKFEEDLQNTPTVPKPPV 92
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
L+ +R+I+ + GSIIGK G IK RE SGA + ++ P ER V + G + +
Sbjct: 11 LLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGSCP---ERIVTVTGTTECIH 67
Query: 584 QAIYQICLIMVDSPPKGATIPYRPL 608
+A IC + T+P P+
Sbjct: 68 KAFTMICKKFEEDLQNTPTVPKPPV 92
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 210/340 (61%), Gaps = 18/340 (5%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+R ESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAFKFEEDINNSMTNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G+PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGMPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPVI 188
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD A L + L + A SSQLK
Sbjct: 189 FAGGQAYTIQGQYAIPHPD---------DACLLSAEYKTALTSTLWRSPQLAHPSSQLKE 239
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ + + N + + + T E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 240 AAWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQ 299
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ ++ E S +R IT+TG+P I+LAQYLIN
Sbjct: 300 MSGAQIKIANAT---EGSTERQITITGSPANISLAQYLIN 336
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 206/332 (62%), Gaps = 18/332 (5%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+R ESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMRVESGARINISEGNCPERIVTITGPTDAIFKAFAMIAFKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDINNSMTNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G+PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGMPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPVIFAGGQAYT 196
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD A L + L + A SSQLK
Sbjct: 197 IQGQYAIPHPD---------DACLLSAEYKTALTSTLWRSPQLAHPSSQLKEAAWRPESL 247
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ + + N + + + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 248 RGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 307
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ ++ E S +R IT+TG+P I+LAQYLIN
Sbjct: 308 ANAT---EGSTERQITITGSPANISLAQYLIN 336
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +R SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQICL 146
A I
Sbjct: 71 AFAMIAF 77
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/347 (45%), Positives = 217/347 (62%), Gaps = 27/347 (7%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR 496
GV +R +M GKEVGSIIGK GETVK++REES ++I IS+ S PERI+T+ G D +FR
Sbjct: 125 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSCPERIITITGPTDCVFR 184
Query: 497 AFSLITKNIEEFHKNQNKHLGGNG---ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
AF++IT +EE L NG + LRL++PASQCGS+IGKGGS+IK IRET
Sbjct: 185 AFTMITFKLEE----DLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRET 240
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
+GA V VA D+LPNSTEREV I G DA+ Q + IC ++++SPPKGATIPYRP P G
Sbjct: 241 TGAQVQVAGDLLPNSTEREVTISGSQDAIIQCVKLICTVILESPPKGATIPYRPSP-TPG 299
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQ 671
L GNQ + A D G++PL +A G+ + G+ + LA L
Sbjct: 300 TVLLAGNQ------VFEASDFGSHPLFSVAQGGVDLQQTYAVQSHYGIPHSELAKLHQLS 353
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFE 731
++ + +Q+ Q + SQ T+Q E+ +PN+LIG++IG+ GTKI E
Sbjct: 354 MQQQGL-APISQSATQVLPGGVEANSQTTSQ-------ELLIPNDLIGSIIGRQGTKINE 405
Query: 732 IRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
IR++SGA I+I + + ++DR +T++GTP AI LAQYLI +E
Sbjct: 406 IRQVSGAQIKI---GSQIDSTSDRHVTISGTPIAINLAQYLITSCLE 449
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 212/338 (62%), Gaps = 27/338 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++REES ++I IS+ S PERI+T+ G D +FRAF++IT +
Sbjct: 134 MHGKEVGSIIGKKGETVKRIREESSARINISEGSCPERIITITGPTDCVFRAFTMITFKL 193
Query: 61 EEFHKNQNKHLGGNG---ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
EE L NG + LRL++PASQCGS+IGKGGS+IK IRET+GA V VA
Sbjct: 194 EE----DLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAG 249
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQF 177
D+LPNSTEREV I G DA+ Q + IC ++++SPPKGATIPYRP P G L GNQ
Sbjct: 250 DLLPNSTEREVTISGSQDAIIQCVKLICTVILESPPKGATIPYRPSP-TPGTVLLAGNQ- 307
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQLKTNHMPRN 235
+ A D G++PL +A G+ + G+ + LA L ++ +
Sbjct: 308 -----VFEASDFGSHPLFSVAQGGVDLQQTYAVQSHYGIPHSELAKLHQLSMQQQGL-AP 361
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+Q+ Q + SQ T+Q E+ +PN+LIG++IG+ GTKI EIR++SGA I
Sbjct: 362 ISQSATQVLPGGVEANSQTTSQ-------ELLIPNDLIGSIIGRQGTKINEIRQVSGAQI 414
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+I + + ++DR +T++GTP AI LAQYLI +E
Sbjct: 415 KI---GSQIDSTSDRHVTISGTPIAINLAQYLITSCLE 449
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL++ + GSIIGK G +K IRE S A + ++ P ER + I G D V +
Sbjct: 128 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSCP---ERIITITGPTDCVFR 184
Query: 140 AIYQICL 146
A I
Sbjct: 185 AFTMITF 191
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 162/342 (47%), Positives = 214/342 (62%), Gaps = 19/342 (5%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 87 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 146
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 147 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 205
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 206 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 263
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL-K 673
G + +Q + PD PLA GL S L+ A+ L +
Sbjct: 264 FAGGQAYTIQGQYAIPHPD----PLAH----GLYQPSAILQLTKLHQLAMQQTPFPPLGQ 315
Query: 674 TN-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
TN P + + N G S + T E+T+PN+LIG +IG+ GTKI EI
Sbjct: 316 TNPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 375
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
R++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 376 RQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 414
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/334 (47%), Positives = 210/334 (62%), Gaps = 19/334 (5%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 95 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 154
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 155 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 213
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 214 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 271
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL-KTN-HMPRN 235
+Q + PD PLA GL S L+ A+ L +TN P
Sbjct: 272 IQGQYAIPHPD----PLAH----GLYQPSAILQLTKLHQLAMQQTPFPPLGQTNPAFPGE 323
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+ + N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I
Sbjct: 324 KLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 383
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 384 KIANAT---EGSSERQITITGTPANISLAQYLIN 414
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + G + + +RL++ + GSIIGK G +K +RE SGA + ++ N
Sbjct: 72 FGKKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---N 128
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
ER V I G DA+ +A I
Sbjct: 129 CPERIVTITGPTDAIFKAFAMI 150
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
F K + G + + +RL++ + GSIIGK G +K +RE SGA + ++ N
Sbjct: 72 FGKKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---N 128
Query: 568 STEREVNIKGVPDAVTQAIYQI 589
ER V I G DA+ +A I
Sbjct: 129 CPERIVTITGPTDAIFKAFAMI 150
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 207/340 (60%), Gaps = 28/340 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDITNSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G T
Sbjct: 189 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQ---------------TT 229
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 230 PAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQ 289
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 290 MSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 203/332 (61%), Gaps = 28/332 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDITNSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 196
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L + +G T P +
Sbjct: 197 IQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQ---------------TTPAFPGEKL 237
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 238 PLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 297
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 298 ANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 155/338 (45%), Positives = 208/338 (61%), Gaps = 25/338 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 47 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 106
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 107 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 165
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 166 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 223
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-H 676
G ++ G + + L L L + +G +TN
Sbjct: 224 FAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG----------------QTNPA 265
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR++S
Sbjct: 266 FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 325
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
GA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 326 GAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 360
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 204/330 (61%), Gaps = 25/330 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 55 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 114
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 115 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 173
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G
Sbjct: 174 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAG--GQA 229
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQN 239
++ G + + L L L + +G +TN P +
Sbjct: 230 YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG----------------QTNPAFPGEKLPL 273
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+
Sbjct: 274 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 333
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 334 AT---EGSSERQITITGTPANISLAQYLIN 360
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 43 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 94
+G D+++ L + + H GG ES++ + +RL++ + GSI
Sbjct: 4 MGEGDAIWAPPILPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSI 63
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 64 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 110
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 539
+G D+++ L + + H GG ES++ + +RL++ + GSI
Sbjct: 4 MGEGDAIWAPPILPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSI 63
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 64 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 110
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 155/338 (45%), Positives = 208/338 (61%), Gaps = 25/338 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-H 676
G ++ G + + L L L + +G +TN
Sbjct: 221 FAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG----------------QTNPA 262
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR++S
Sbjct: 263 FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 322
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
GA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 323 GAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 357
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 204/330 (61%), Gaps = 25/330 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAG--GQA 226
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQN 239
++ G + + L L L + +G +TN P +
Sbjct: 227 YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG----------------QTNPAFPGEKLPL 270
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+
Sbjct: 271 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 330
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 331 AT---EGSSERQITITGTPANISLAQYLIN 357
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 43 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 94
+G D+++ L + + H GG ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAIWAPPILPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 539
+G D+++ L + + H GG ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAIWAPPILPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 155/338 (45%), Positives = 208/338 (61%), Gaps = 25/338 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-H 676
G ++ G + + L L L + +G +TN
Sbjct: 221 FAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG----------------QTNPA 262
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR++S
Sbjct: 263 FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 322
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
GA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 323 GAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 357
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 204/330 (61%), Gaps = 25/330 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAG--GQA 226
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQN 239
++ G + + L L L + +G +TN P +
Sbjct: 227 YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG----------------QTNPAFPGEKLPL 270
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+
Sbjct: 271 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 330
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 331 AT---EGSSERQITITGTPANISLAQYLIN 357
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 155/338 (45%), Positives = 208/338 (61%), Gaps = 25/338 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-H 676
G ++ G + + L L L + +G +TN
Sbjct: 221 FAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG----------------QTNPA 262
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR++S
Sbjct: 263 FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 322
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
GA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 323 GAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 357
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 204/330 (61%), Gaps = 25/330 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAG--GQA 226
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQN 239
++ G + + L L L + +G +TN P +
Sbjct: 227 YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG----------------QTNPAFPGEKLPL 270
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+
Sbjct: 271 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 330
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 331 AT---EGSSERQITITGTPANISLAQYLIN 357
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 155/338 (45%), Positives = 208/338 (61%), Gaps = 25/338 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-H 676
G ++ G + + L L L + +G +TN
Sbjct: 221 FAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG----------------QTNPA 262
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR++S
Sbjct: 263 FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 322
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
GA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 323 GAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 357
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 204/330 (61%), Gaps = 25/330 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAG--GQA 226
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQN 239
++ G + + L L L + +G +TN P +
Sbjct: 227 YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG----------------QTNPAFPGEKLPL 270
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+
Sbjct: 271 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 330
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 331 AT---EGSSERQITITGTPANISLAQYLIN 357
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 207/340 (60%), Gaps = 28/340 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G T
Sbjct: 189 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQ---------------TT 229
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 230 PAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQ 289
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 290 MSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 203/332 (61%), Gaps = 28/332 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 196
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L + +G T P +
Sbjct: 197 IQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQ---------------TTPAFPGEKL 237
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 238 PLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 297
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 298 ANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 47 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 106
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 107 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 165
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 166 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 223
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 224 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 263
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 264 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 323
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 324 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 361
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 55 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 114
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 115 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 173
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 174 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 231
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 232 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 271
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 272 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 331
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 332 IANAT---EGSSERQITITGTPANISLAQYLIN 361
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 70 HLGGNGESQL--------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
H G ES++ + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 31 HFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 87
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 88 NCPERIVTITGPTDAIFKAFAMI 110
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 515 HLGGNGESQL--------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
H G ES++ + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 31 HFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 87
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 88 NCPERIVTITGPTDAIFKAFAMI 110
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 57 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 116
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 117 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 175
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 176 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 233
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 234 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 273
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 274 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 333
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 334 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 371
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 65 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 124
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 125 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 183
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 184 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 241
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 242 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 281
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 282 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 341
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 342 IANAT---EGSSERQITITGTPANISLAQYLIN 371
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 70 HLGGNGESQL--------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
H G ES++ + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 41 HFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 97
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 98 NCPERIVTITGPTDAIFKAFAMI 120
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 515 HLGGNGESQL--------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
H G ES++ + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 41 HFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 97
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 98 NCPERIVTITGPTDAIFKAFAMI 120
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 211/356 (59%), Gaps = 51/356 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IMQGKE GSIIGK G+ VKK RE+SG+KI ISDSS PERIVTV G+ D +F+AF++I
Sbjct: 4 LRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDSSCPERIVTVTGTTDQIFKAFTMI 63
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
K EE N H + LRLIVPASQCGS+IGKGG++IK IRE +GAS+ VA
Sbjct: 64 CKKFEE--DIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIRELTGASIQVA 121
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP--------LPQNAG 613
S+MLPNSTER V + G DA+TQ IY IC +M++SPPKGATIPYRP LP + G
Sbjct: 122 SEMLPNSTERAVTVSGQADAITQCIYNICCVMLESPPKGATIPYRPKPCVPPVMLPSSCG 181
Query: 614 GPG--LIGNQFGMQNSLMGA--PDMGNN--PLAGLAALGLGGNSGG---------GMGGG 658
G + G Q + S A PD+ + PL + L + G
Sbjct: 182 GQAFSIQGQQILLPPSHPNATQPDVSPHCVPLPPPCFISLRARLQTHSLICIIIRDVYPG 241
Query: 659 LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELI 718
+NAA A + PR + GP + Q T EMT+PN+LI
Sbjct: 242 MNAAMAAGIP------QFAPR-------------QAGPGANMSAQ----THEMTIPNDLI 278
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+GG KI EIR++SGA I+I+ + +E S+DR +T+ G+ + I AQY+IN
Sbjct: 279 GCIIGRGGAKINEIRQLSGATIKIANA---DEGSSDRKVTIMGSLETIHAAQYMIN 331
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 208/352 (59%), Gaps = 51/352 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKE GSIIGK G+ VKK RE+SG+KI ISDSS PERIVTV G+ D +F+AF++I K
Sbjct: 8 MQGKEAGSIIGKKGDNVKKFREDSGAKINISDSSCPERIVTVTGTTDQIFKAFTMICKKF 67
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N H + LRLIVPASQCGS+IGKGG++IK IRE +GAS+ VAS+ML
Sbjct: 68 EE--DIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIRELTGASIQVASEML 125
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP--------LPQNAGGPG- 171
PNSTER V + G DA+TQ IY IC +M++SPPKGATIPYRP LP + GG
Sbjct: 126 PNSTERAVTVSGQADAITQCIYNICCVMLESPPKGATIPYRPKPCVPPVMLPSSCGGQAF 185
Query: 172 -LIGNQFGMQNSLMGA--PDMGNN--PLAGLAALGLGGNSGG---------GMGGGLNAA 217
+ G Q + S A PD+ + PL + L + G+NAA
Sbjct: 186 SIQGQQILLPPSHPNATQPDVSPHCVPLPPPCFISLRARLQTHSLICIIIRDVYPGMNAA 245
Query: 218 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 277
A + PR + GP + Q T EMT+PN+LIG +I
Sbjct: 246 MAAGIP------QFAPR-------------QAGPGANMSAQ----THEMTIPNDLIGCII 282
Query: 278 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
G+GG KI EIR++SGA I+I+ + +E S+DR +T+ G+ + I AQY+IN
Sbjct: 283 GRGGAKINEIRQLSGATIKIANA---DEGSSDRKVTIMGSLETIHAAQYMIN 331
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
++ LR+I+ + GSIIGK G +K RE SGA + ++ P ER V + G D +
Sbjct: 1 MVTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDSSCP---ERIVTVTGTTDQIF 57
Query: 139 QAIYQIC 145
+A IC
Sbjct: 58 KAFTMIC 64
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
++ LR+I+ + GSIIGK G +K RE SGA + ++ P ER V + G D +
Sbjct: 1 MVTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDSSCP---ERIVTVTGTTDQIF 57
Query: 584 QAIYQIC 590
+A IC
Sbjct: 58 KAFTMIC 64
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 207/340 (60%), Gaps = 28/340 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G T
Sbjct: 189 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ---------------TT 229
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 230 PAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQ 289
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 290 MSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 203/332 (61%), Gaps = 28/332 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 196
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L + +G T P +
Sbjct: 197 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ---------------TTPAFPGEKL 237
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 238 PLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 297
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 298 ANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/338 (45%), Positives = 204/338 (60%), Gaps = 24/338 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P +A
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L L + +G T
Sbjct: 191 GGQAYSIQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQ---------------TTPA 231
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR++S
Sbjct: 232 FPGEKLPLHSSEEAQNLMGQSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMS 291
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
GA I+I+ + E S +R IT+TG+P I+LAQYLIN
Sbjct: 292 GAQIKIASAM---EGSAERQITITGSPANISLAQYLIN 326
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 152/330 (46%), Positives = 200/330 (60%), Gaps = 24/330 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P +A G + +Q
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAPVIFAGGQAYSIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ PD L L L + +G T P +
Sbjct: 199 GQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQ---------------TTPAFPGEKLPL 239
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+
Sbjct: 240 HSSEEAQNLMGQSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAS 299
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E S +R IT+TG+P I+LAQYLIN
Sbjct: 300 AM---EGSAERQITITGSPANISLAQYLIN 326
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 221 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 260
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 261 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 321 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 228
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 229 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 268
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 269 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 329 IANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 43 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 94
+G D+++ L + + H GG ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAIWAPPILPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 539
+G D+++ L + + H GG ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAIWAPPILPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/351 (45%), Positives = 212/351 (60%), Gaps = 30/351 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ S PERIVT+ G D++F+A
Sbjct: 15 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKA 74
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I EE N + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 75 FSMIALKFEE-DINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 134 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPII 191
Query: 618 I-GNQFGMQNSLMGAPDMGNNPLAG----LAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G Q L A GN+ + A + G + L L QL
Sbjct: 192 FAGGQVRADTILASA---GNHTVLAQPQPAPAFTIQGQY------AIPHPDLTKL--HQL 240
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
H P Q D S ++ E+T+PN+LIG +IG+ G+KI EI
Sbjct: 241 AMQHPPFTP-LGQTTPGFPGLDATSPTSSH-------ELTIPNDLIGCIIGRQGSKINEI 292
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 783
R++SGA I+I+ ++ E S +R +T+TG+P I+LAQYLIN S+E+ + +
Sbjct: 293 RQMSGAQIKIANAT---EGSAERQVTITGSPANISLAQYLINASLEMAKVS 340
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 208/343 (60%), Gaps = 30/343 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ S PERIVT+ G D++F+AFS+I
Sbjct: 23 MHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFSMIALKF 82
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 83 EE-DINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 141
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGM 179
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G Q
Sbjct: 142 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPIIFAGGQVRA 199
Query: 180 QNSLMGAPDMGNNPLAG----LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
L A GN+ + A + G + L L QL H P
Sbjct: 200 DTILASA---GNHTVLAQPQPAPAFTIQGQY------AIPHPDLTKL--HQLAMQHPPFT 248
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
Q D S ++ E+T+PN+LIG +IG+ G+KI EIR++SGA I
Sbjct: 249 P-LGQTTPGFPGLDATSPTSSH-------ELTIPNDLIGCIIGRQGSKINEIRQMSGAQI 300
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
+I+ ++ E S +R +T+TG+P I+LAQYLIN S+E+ + +
Sbjct: 301 KIANAT---EGSAERQVTITGSPANISLAQYLINASLEMAKVS 340
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER V I G DA+ +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCP---ERIVTITGPTDAIFK 73
Query: 140 AIYQICL 146
A I L
Sbjct: 74 AFSMIAL 80
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 221 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 260
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 261 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 321 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 228
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 229 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 268
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 269 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 329 IANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 43 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 94
+G D+++ L + + H GG ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAIWAPSILPHSTLSTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 539
+G D+++ L + + H GG ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAIWAPSILPHSTLSTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 221 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 260
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 261 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 321 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 228
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 229 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 268
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 269 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 329 IANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 43 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 102
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 103 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 161
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 162 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 219
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 220 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 259
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 260 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 319
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 320 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 357
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 51 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 110
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 111 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 169
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 170 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 227
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 228 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 267
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 268 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 327
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 328 IANAT---EGSSERQITITGTPANISLAQYLIN 357
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 27 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 83
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 84 NCPERIVTITGPTDAIFKAFAMI 106
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 27 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 83
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 84 NCPERIVTITGPTDAIFKAFAMI 106
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 189 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 228
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 229 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 288
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 289 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 196
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 197 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 236
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 237 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 296
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 297 IANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 189 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 228
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 229 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 288
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 289 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 196
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 197 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 236
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 237 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 296
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 297 IANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 221 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 260
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 261 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 321 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 228
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 229 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 268
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 269 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 329 IANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 43 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 94
+G D+ + L + + H G ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAFWVPSVLPHSTLSALSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 539
+G D+ + L + + H G ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAFWVPSVLPHSTLSALSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 221 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 260
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 261 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 321 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 228
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 229 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 268
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 269 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 329 IANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/351 (45%), Positives = 212/351 (60%), Gaps = 30/351 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ S PERIVT+ G D++F+A
Sbjct: 15 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKA 74
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I EE N + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 75 FSMIALKFEE-DINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 134 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPII 191
Query: 618 I-GNQFGMQNSLMGAPDMGNNPLAG----LAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G Q L A GN+ + A + G + L L QL
Sbjct: 192 FAGGQVRADTILASA---GNHTVLAQPQPAPAFTIQGQY------AIPHPDLTKL--HQL 240
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
H P Q D S ++ E+T+PN+LIG +IG+ G+KI EI
Sbjct: 241 AMQHPPFTP-LGQTTPGFPGLDATSPTSSH-------ELTIPNDLIGCIIGRQGSKINEI 292
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 783
R++SGA I+I+ ++ E S +R +T+TG+P I+LAQYLIN S+E+ + +
Sbjct: 293 RQMSGAQIKIANAT---EGSAERQVTITGSPANISLAQYLINASLEMAKVS 340
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 208/343 (60%), Gaps = 30/343 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ S PERIVT+ G D++F+AFS+I
Sbjct: 23 MHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFSMIALKF 82
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 83 EE-DINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 141
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGM 179
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G Q
Sbjct: 142 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPIIFAGGQVRA 199
Query: 180 QNSLMGAPDMGNNPLAG----LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
L A GN+ + A + G + L L QL H P
Sbjct: 200 DTILASA---GNHTVLAQPQPAPAFTIQGQY------AIPHPDLTKL--HQLAMQHPPFT 248
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
Q D S ++ E+T+PN+LIG +IG+ G+KI EIR++SGA I
Sbjct: 249 P-LGQTTPGFPGLDATSPTSSH-------ELTIPNDLIGCIIGRQGSKINEIRQMSGAQI 300
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
+I+ ++ E S +R +T+TG+P I+LAQYLIN S+E+ + +
Sbjct: 301 KIANAT---EGSAERQVTITGSPANISLAQYLINASLEMAKVS 340
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER V I G DA+ +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCP---ERIVTITGPTDAIFK 73
Query: 140 AIYQICL 146
A I L
Sbjct: 74 AFSMIAL 80
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIFQCVKQICVVMLESPPKGATIPYRPKP--ACTPVI 188
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 189 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 228
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 229 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 288
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 289 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGTPDAIFQCVKQICVVMLESPPKGATIPYRPKP--ACTPVIFAGGQAYT 196
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 197 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 236
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 237 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 296
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 297 IANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 216/358 (60%), Gaps = 34/358 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 15 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTCPERIVTITGPTDAIFKA 74
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
FS+I EE + N + + + + LRL+VPASQCGS+IGKGGS+IK IRE++G
Sbjct: 75 FSMIALKFEE---DINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP 615
A V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P
Sbjct: 132 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAP 189
Query: 616 GLI-GNQFGMQNSLMGAPDMGNNPLAG----LAALGLGGNSGGGMGGGLNAAALAALASS 670
+ G Q L A GN+ + A + G + L L
Sbjct: 190 IIFAGGQVRADTILASA---GNHTVLAQPQPAPAFTIQGQY------AIPHPDLTKL--H 238
Query: 671 QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
QL H P Q D + ++ E+T+PN+LIG +IG+ G+KI
Sbjct: 239 QLAMQHPPFTP-LGQTTPGFPGLDATTPTSSH-------ELTIPNDLIGCIIGRQGSKIN 290
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEG 788
EIR++SGA I+I+ ++ E S +R +T+TG+P I+LAQYLIN S+ L++ G+
Sbjct: 291 EIRQMSGAQIKIANAT---EGSAERQVTITGSPANISLAQYLINASIYFLKSECLGDA 345
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 212/350 (60%), Gaps = 34/350 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AFS+I
Sbjct: 23 MHGKEVGSIIGKKGETVKKMREESGARINISEGTCPERIVTITGPTDAIFKAFSMIALKF 82
Query: 61 EEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
EE + N + + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA D
Sbjct: 83 EE---DINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD 139
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQF 177
MLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G Q
Sbjct: 140 MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPIIFAGGQV 197
Query: 178 GMQNSLMGAPDMGNNPLAG----LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP 233
L A GN+ + A + G + L L QL H P
Sbjct: 198 RADTILASA---GNHTVLAQPQPAPAFTIQGQY------AIPHPDLTKL--HQLAMQHPP 246
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
Q D + ++ E+T+PN+LIG +IG+ G+KI EIR++SGA
Sbjct: 247 FTP-LGQTTPGFPGLDATTPTSSH-------ELTIPNDLIGCIIGRQGSKINEIRQMSGA 298
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEG 343
I+I+ ++ E S +R +T+TG+P I+LAQYLIN S+ L++ G+
Sbjct: 299 QIKIANAT---EGSAERQVTITGSPANISLAQYLINASIYFLKSECLGDA 345
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER V I G DA+ +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTCP---ERIVTITGPTDAIFK 73
Query: 140 AIYQICL 146
A I L
Sbjct: 74 AFSMIAL 80
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 162/361 (44%), Positives = 215/361 (59%), Gaps = 34/361 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ S PERIVT+ G D++F+A
Sbjct: 15 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKA 74
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I EE N + + LRL++PASQCGS+IGKGGS+IK IRE++GA
Sbjct: 75 FSMIALKFEE-DINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 134 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPII 191
Query: 618 I-GNQFGMQNSLMGAPDMGNNPLAGLA------ALGLGGNSGGGMGGGLNAAALAALAS- 669
G Q L A GN+ A LA A + G + L L S
Sbjct: 192 FAGGQVRADTLLASA---GNH--AVLAQPQTAPAFTIQGQYAIPHPDVSSMHVLYFLYSL 246
Query: 670 -------SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 722
QL H P Q D + ++ E+T+PN+LIG +I
Sbjct: 247 LPSLTKLHQLAMQHPPFTP-LGQTTPGFPGLDASTPASSH-------ELTIPNDLIGCII 298
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRA 782
G+ G+KI EIR++SGA I+I+ ++ E S +R +T+TG+P I+LAQYLIN S+E+ +
Sbjct: 299 GRQGSKINEIRQMSGAQIKIANAT---EGSAERQVTITGSPANISLAQYLINASLEMAKV 355
Query: 783 N 783
+
Sbjct: 356 S 356
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 211/353 (59%), Gaps = 34/353 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ S PERIVT+ G D++F+AFS+I
Sbjct: 23 MHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFSMIALKF 82
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL++PASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 83 EE-DINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 141
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGM 179
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G Q
Sbjct: 142 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPIIFAGGQVRA 199
Query: 180 QNSLMGAPDMGNNPLAGLA------ALGLGGNSGGGMGGGLNAAALAALAS--------S 225
L A GN+ A LA A + G + L L S
Sbjct: 200 DTLLASA---GNH--AVLAQPQTAPAFTIQGQYAIPHPDVSSMHVLYFLYSLLPSLTKLH 254
Query: 226 QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 285
QL H P Q D + ++ E+T+PN+LIG +IG+ G+KI
Sbjct: 255 QLAMQHPPFTP-LGQTTPGFPGLDASTPASSH-------ELTIPNDLIGCIIGRQGSKIN 306
Query: 286 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
EIR++SGA I+I+ ++ E S +R +T+TG+P I+LAQYLIN S+E+ + +
Sbjct: 307 EIRQMSGAQIKIANAT---EGSAERQVTITGSPANISLAQYLINASLEMAKVS 356
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER V I G DA+ +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCP---ERIVTITGPTDAIFK 73
Query: 140 AIYQICL 146
A I L
Sbjct: 74 AFSMIAL 80
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 156/341 (45%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 69 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 128
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 129 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 187
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 188 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 245
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 246 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 285
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 286 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 345
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TG+P I+LAQYLIN
Sbjct: 346 QMSGAQIKIANAT---EGSSERQITITGSPANISLAQYLIN 383
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 154/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 77 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 136
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 137 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 195
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 196 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 253
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 254 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 293
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 294 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 353
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TG+P I+LAQYLIN
Sbjct: 354 IANAT---EGSSERQITITGSPANISLAQYLIN 383
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 47 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSIIGKG 98
D+L+ L I + H G ES++ + +RL++ + GSIIGK
Sbjct: 30 DTLWAPSILPHDVIGVLSQRPQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKK 89
Query: 99 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 90 GETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 132
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSIIGKG 543
D+L+ L I + H G ES++ + +RL++ + GSIIGK
Sbjct: 30 DTLWAPSILPHDVIGVLSQRPQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKK 89
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 90 GETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 132
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 163/365 (44%), Positives = 216/365 (59%), Gaps = 38/365 (10%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ S PERIVT+ G D++F+A
Sbjct: 15 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKA 74
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I EE N + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 75 FSMIALKFEE-DINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A GP +
Sbjct: 134 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASGPII 191
Query: 618 I-GNQFGMQNSLMGAPDMGNNPLAG----LAALGLGGNSGGGMGGGLNAAA--------- 663
G Q + L A GN+ + A + G +A A
Sbjct: 192 FAGGQVRAETILASA---GNHTVLAQPQPAPAFAIQGQYAIPHPDVSSAHANYTLLFLFI 248
Query: 664 ------LAALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
L+ L QL H P Q D S ++ E+T+PN+
Sbjct: 249 CFGQHLLSTLTKLHQLAMQHTPFTP-LGQTTPGFPGLDATSPTSSH-------ELTIPND 300
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG +IG+ G+KI EIR++SGA I+I+ +S E + +R +T+TG+P I+LAQYLIN S
Sbjct: 301 LIGCIIGRQGSKINEIRQMSGAQIKIANAS---EGNGERQVTITGSPANISLAQYLINAS 357
Query: 777 VELLR 781
+E+ +
Sbjct: 358 LEMAK 362
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 212/357 (59%), Gaps = 38/357 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ S PERIVT+ G D++F+AFS+I
Sbjct: 23 MHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFSMIALKF 82
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 83 EE-DINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 141
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGM 179
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A GP + G Q
Sbjct: 142 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASGPIIFAGGQVRA 199
Query: 180 QNSLMGAPDMGNNPLAG----LAALGLGGNSGGGMGGGLNAAA---------------LA 220
+ L A GN+ + A + G +A A L+
Sbjct: 200 ETILASA---GNHTVLAQPQPAPAFAIQGQYAIPHPDVSSAHANYTLLFLFICFGQHLLS 256
Query: 221 ALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 279
L QL H P Q D S ++ E+T+PN+LIG +IG+
Sbjct: 257 TLTKLHQLAMQHTPFTP-LGQTTPGFPGLDATSPTSSH-------ELTIPNDLIGCIIGR 308
Query: 280 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLR 336
G+KI EIR++SGA I+I+ +S E + +R +T+TG+P I+LAQYLIN S+E+ +
Sbjct: 309 QGSKINEIRQMSGAQIKIANAS---EGNGERQVTITGSPANISLAQYLINASLEMAK 362
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER V I G DA+ +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCP---ERIVTITGPTDAIFK 73
Query: 140 AIYQICL 146
A I L
Sbjct: 74 AFSMIAL 80
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 208/341 (60%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+R+ESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 189 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 228
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 229 NPAFPGEKLSLHSSEEAQNLMGQPSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 288
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 289 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 153/333 (45%), Positives = 204/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+R+ESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMRDESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 196
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 197 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 236
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 237 LSLHSSEEAQNLMGQPSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 296
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 297 IANAT---EGSSERQITITGTPANISLAQYLIN 326
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +R+ SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 203/337 (60%), Gaps = 43/337 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G ++ G + + L L L + +G A L +S + H
Sbjct: 189 FAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQ--TTPAFPGLDASPPASTH- 243
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
E+T+PN+LIG +IG+ GTKI EIR++SG
Sbjct: 244 --------------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSG 271
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
A I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 272 AQIKIANAT---EGSSERQITITGTPANISLAQYLIN 305
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 199/329 (60%), Gaps = 43/329 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAG--GQA 194
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
++ G + + L L L + +G A L +S + H
Sbjct: 195 YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQ--TTPAFPGLDASPPASTH--------- 243
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ +
Sbjct: 244 ------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA 279
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E S++R IT+TGTP I+LAQYLIN
Sbjct: 280 T---EGSSERQITITGTPANISLAQYLIN 305
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 208/344 (60%), Gaps = 14/344 (4%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 IGNQFGMQNSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
+ L + + + PL G + L+ A+ L
Sbjct: 189 FAGGQVRADPLAASTANLSLLLQHQPLPAYTIQGQYAIPHPDL-TKLHQLAMQQTPFPPL 247
Query: 673 --KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
T P + + N G S + T E+T+PN+LIG +IG+ GTKI
Sbjct: 248 GQTTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 307
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 308 EIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 348
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 204/336 (60%), Gaps = 14/336 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQVRA 196
Query: 181 NSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL--KTNHMP 233
+ L + + + PL G + L+ A+ L T P
Sbjct: 197 DPLAASTANLSLLLQHQPLPAYTIQGQYAIPHPDL-TKLHQLAMQQTPFPPLGQTTPAFP 255
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
+ + N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA
Sbjct: 256 GEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 315
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 316 QIKIANAT---EGSSERQITITGTPANISLAQYLIN 348
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/337 (45%), Positives = 205/337 (60%), Gaps = 42/337 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE + + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIISSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G ++ G + + L L L + + G N A A L +S + H
Sbjct: 189 FAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL-GQTNPAFPAGLDASPPASTH- 244
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
E+T+PN+LIG +IG+ GTKI EIR++SG
Sbjct: 245 --------------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSG 272
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
A I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 273 AQIKIANAT---EGSSERQITITGTPANISLAQYLIN 306
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 201/329 (61%), Gaps = 42/329 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIISSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAG--GQA 194
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
++ G + + L L L + + G N A A L +S + H
Sbjct: 195 YTIQGQYAIPHPDLTKLHQLAMQQTPFPPL-GQTNPAFPAGLDASPPASTH--------- 244
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ +
Sbjct: 245 ------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA 280
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E S++R IT+TGTP I+LAQYLIN
Sbjct: 281 T---EGSSERQITITGTPANISLAQYLIN 306
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 207/342 (60%), Gaps = 29/342 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REES ++I +S+ + PERIVT+ G D++F+A
Sbjct: 14 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEGNCPERIVTITGPTDAIFKA 73
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA
Sbjct: 74 FAMIAYKFEEDIINSMSNSQATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 133 VQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP--ATAPVI 190
Query: 618 I-GNQFGMQNSLMGAPDMGNNPL----AGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G Q ++ + AP N L L A + G A+ L
Sbjct: 191 FSGGQ--VRADTLTAPATANLSLLLQHQPLPAYTIQGQY--------------AIPHPDL 234
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
H Q + P + Q + T E+T+PN+LIG +IG+ GTKI EI
Sbjct: 235 TKLHQLAMQQTPFTSLGQTTPAFPGVDASSQAS--THELTIPNDLIGCIIGRQGTKINEI 292
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
R++SGA I+I+ + E S+DR IT+TGTP I+LAQYLIN
Sbjct: 293 RQMSGAQIKIANAM---EGSSDRQITITGTPANISLAQYLIN 331
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/334 (45%), Positives = 203/334 (60%), Gaps = 29/334 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REES ++I +S+ + PERIVT+ G D++F+AF++I
Sbjct: 22 MHGKEVGSIIGKKGETVKKMREESSARINVSEGNCPERIVTITGPTDAIFKAFAMIAYKF 81
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA V VA DML
Sbjct: 82 EEDIINSMSNSQATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDML 140
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGM 179
PNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P A P + G Q +
Sbjct: 141 PNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP--ATAPVIFSGGQ--V 196
Query: 180 QNSLMGAPDMGNNPL----AGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+ + AP N L L A + G A+ L H
Sbjct: 197 RADTLTAPATANLSLLLQHQPLPAYTIQGQY--------------AIPHPDLTKLHQLAM 242
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
Q + P + Q + T E+T+PN+LIG +IG+ GTKI EIR++SGA I
Sbjct: 243 QQTPFTSLGQTTPAFPGVDASSQAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 300
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+I+ + E S+DR IT+TGTP I+LAQYLIN
Sbjct: 301 KIANAM---EGSSDRQITITGTPANISLAQYLIN 331
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE S A + V+ N ER V I G DA+ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG---NCPERIVTITGPTDAIFK 72
Query: 140 AIYQI 144
A I
Sbjct: 73 AFAMI 77
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 207/340 (60%), Gaps = 16/340 (4%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ S PERIVT+ G D++F+A
Sbjct: 15 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKA 74
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
FS+I EE + N + + + + LRL+VPASQCGS+IGKGGS+IK IRE++G
Sbjct: 75 FSMIALKFEE---DINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 131
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP 615
A V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P
Sbjct: 132 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAP 189
Query: 616 GLI-GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
+ G Q L A + L+ L L L + A+ L
Sbjct: 190 IIFAGGQVRADTILASAGNHTELRLSYLTDLCL---NCACCFQAFTIQGQYAIPHPDLTK 246
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H Q+ + P + + E+T+PN+LIG +IG+ G+KI EIR+
Sbjct: 247 LHQLAMQHPPFTPLGQTTPGFPGLDATTPTS--SHELTIPNDLIGCIIGRQGSKINEIRQ 304
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ ++ E S +R +T+TG+P I+LAQYLIN
Sbjct: 305 MSGAQIKIANAT---EGSAERQVTITGSPANISLAQYLIN 341
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 203/332 (61%), Gaps = 16/332 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ S PERIVT+ G D++F+AFS+I
Sbjct: 23 MHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFSMIALKF 82
Query: 61 EEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
EE + N + + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA D
Sbjct: 83 EE---DINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD 139
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQF 177
MLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G Q
Sbjct: 140 MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASAPIIFAGGQV 197
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
L A + L+ L L L + A+ L H Q+
Sbjct: 198 RADTILASAGNHTELRLSYLTDLCL---NCACCFQAFTIQGQYAIPHPDLTKLHQLAMQH 254
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ P + + E+T+PN+LIG +IG+ G+KI EIR++SGA I+I
Sbjct: 255 PPFTPLGQTTPGFPGLDATTPTS--SHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 312
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ ++ E S +R +T+TG+P I+LAQYLIN
Sbjct: 313 ANAT---EGSAERQVTITGSPANISLAQYLIN 341
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER V I G DA+ +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCP---ERIVTITGPTDAIFK 73
Query: 140 AIYQICL 146
A I L
Sbjct: 74 AFSMIAL 80
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 204/340 (60%), Gaps = 48/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G A L +S +
Sbjct: 221 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ--TNPAFPGLDASPPAS 274
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 275 TH---------------------------------ELTIPNDLIGCIIGRQGTKINEIRQ 301
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 302 MSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 338
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 200/332 (60%), Gaps = 48/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 228
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L + +G A L +S + H
Sbjct: 229 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ--TNPAFPGLDASPPASTH------ 276
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 277 ---------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 309
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 310 ANAT---EGSSERQITITGTPANISLAQYLIN 338
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 163/405 (40%), Positives = 233/405 (57%), Gaps = 37/405 (9%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR 496
GV +R +M GKEVGSIIGK GETVK++REES +++ IS+ S PERI+T+ GS D +FR
Sbjct: 13 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDCVFR 72
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQL---IQLRLIVPASQCGSIIGKGGSQIKTIRET 553
AF++IT +EE L NG + LRL++PASQCGS+IGKGG++IK IRE+
Sbjct: 73 AFTMITHKLEE----DLAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIKEIRES 128
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
+GA + VA D+LPNSTER V I G D+V Q + IC ++++SPPKGATIPYRP P A
Sbjct: 129 TGAQIQVAGDLLPNSTERGVTISGNQDSVIQCVKLICTVILESPPKGATIPYRPSPSPAA 188
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQ 671
LI N L A + +P+ +A GL + G+ + LA
Sbjct: 189 --VLIAG-----NQLFDASEFATHPMYSVAQGGLDLQQAYTLQNQYGIPHSELA------ 235
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFE 731
K + + Q N + +N Q +Q E+ +PN+LIG++IG+ GTKI E
Sbjct: 236 -KLHQLSMQQGLNPIAQPASTVIPAGMDSNSQTSQ---ELLIPNDLIGSIIGRQGTKINE 291
Query: 732 IRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGE 791
IR++SGA I+I + + ++DR +T+TGTP +I LAQYLI +E ++ +
Sbjct: 292 IRQVSGAQIKI---GSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAKST------AQ 342
Query: 792 SNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQL--AQILTKPAG 834
+ D N+ + P + + P AA+ L A I++ P G
Sbjct: 343 AATLAAPVDLNMAFTQPASPAASPTPTLAAMGALTPAHIVSTPYG 387
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/403 (40%), Positives = 231/403 (57%), Gaps = 37/403 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++REES +++ IS+ S PERI+T+ GS D +FRAF++IT +
Sbjct: 22 MHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDCVFRAFTMITHKL 81
Query: 61 EEFHKNQNKHLGGNGESQL---IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
EE L NG + LRL++PASQCGS+IGKGG++IK IRE++GA + VA
Sbjct: 82 EE----DLAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAG 137
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQF 177
D+LPNSTER V I G D+V Q + IC ++++SPPKGATIPYRP P A LI
Sbjct: 138 DLLPNSTERGVTISGNQDSVIQCVKLICTVILESPPKGATIPYRPSPSPAA--VLIAG-- 193
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQLKTNHMPRN 235
N L A + +P+ +A GL + G+ + LA K + +
Sbjct: 194 ---NQLFDASEFATHPMYSVAQGGLDLQQAYTLQNQYGIPHSELA-------KLHQLSMQ 243
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
Q N + +N Q +Q E+ +PN+LIG++IG+ GTKI EIR++SGA I
Sbjct: 244 QGLNPIAQPASTVIPAGMDSNSQTSQ---ELLIPNDLIGSIIGRQGTKINEIRQVSGAQI 300
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 355
+I + + ++DR +T+TGTP +I LAQYLI +E ++ ++ D
Sbjct: 301 KI---GSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAKST------AQAATLAAPVD 351
Query: 356 NNLPSSAPLAGLNASNPLAAALPQL--AQILTKPGALNALTSL 396
N+ + P + + P AA+ L A I++ P L+SL
Sbjct: 352 LNMAFTQPASPAASPTPTLAAMGALTPAHIVSTPYGAMPLSSL 394
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
N + G G + LRL++ + GSIIGK G +K IRE S A V ++ P E
Sbjct: 2 NCEQDFGEGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCP---E 58
Query: 126 REVNIKGVPDAVTQAIYQI 144
R + I G D V +A I
Sbjct: 59 RIITITGSTDCVFRAFTMI 77
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 511 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 570
N + G G + LRL++ + GSIIGK G +K IRE S A V ++ P E
Sbjct: 2 NCEQDFGEGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCP---E 58
Query: 571 REVNIKGVPDAVTQAIYQI 589
R + I G D V +A I
Sbjct: 59 RIITITGSTDCVFRAFTMI 77
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 204/340 (60%), Gaps = 48/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G A L +S +
Sbjct: 221 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ--TNPAFPGLDASPPAS 274
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 275 TH---------------------------------ELTIPNDLIGCIIGRQGTKINEIRQ 301
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 302 MSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 338
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 200/332 (60%), Gaps = 48/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 228
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L + +G A L +S + H
Sbjct: 229 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ--TNPAFPGLDASPPASTH------ 276
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 277 ---------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 309
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 310 ANAT---EGSSERQITITGTPANISLAQYLIN 338
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 43 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 94
+G D+ + L + + H G ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAFWVPSVLPHSTLSALSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 539
+G D+ + L + + H G ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAFWVPSVLPHSTLSALSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 204/340 (60%), Gaps = 48/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G A L +S +
Sbjct: 189 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ--TNPAFPGLDASPPAS 242
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 243 TH---------------------------------ELTIPNDLIGCIIGRQGTKINEIRQ 269
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 270 MSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 306
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 200/332 (60%), Gaps = 48/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 196
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L + +G A L +S + H
Sbjct: 197 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ--TNPAFPGLDASPPASTH------ 244
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 245 ---------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 277
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 278 ANAT---EGSSERQITITGTPANISLAQYLIN 306
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 204/340 (60%), Gaps = 48/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 188
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G A L +S +
Sbjct: 189 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ--TNPAFPGLDASPPAS 242
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 243 TH---------------------------------ELTIPNDLIGCIIGRQGTKINEIRQ 269
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 270 MSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 306
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 200/332 (60%), Gaps = 48/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 196
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L + +G A L +S + H
Sbjct: 197 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ--TNPAFPGLDASPPASTH------ 244
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 245 ---------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 277
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 278 ANAT---EGSSERQITITGTPANISLAQYLIN 306
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 210/344 (61%), Gaps = 14/344 (4%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVI 220
Query: 618 IGNQFGMQNSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
+ L + + + PL G + L+ A+ L
Sbjct: 221 FAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTK-LHQLAMQQTPFPPL 279
Query: 673 -KTN-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
+TN P + + N G S + T E+T+PN+LIG +IG+ GTKI
Sbjct: 280 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 339
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 340 EIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 380
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 206/336 (61%), Gaps = 14/336 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVIFAGGQVRA 228
Query: 181 NSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL-KTN-HMP 233
+ L + + + PL G + L+ A+ L +TN P
Sbjct: 229 DPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTK-LHQLAMQQTPFPPLGQTNPAFP 287
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
+ + N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA
Sbjct: 288 GEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 347
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 348 QIKIANAT---EGSSERQITITGTPANISLAQYLIN 380
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 46/268 (17%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
Q + + V +L + G GG+ D ++ S+A L+
Sbjct: 188 --IQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAA-----STANLSL 240
Query: 367 LNASNPLAAALPQLAQILTKPG--ALNAL----TSLSALGGLSDLLGG-----GSSGGGS 415
L PL A Q + P L+ L T LG + G SS
Sbjct: 241 LLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQ 300
Query: 416 GNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI 475
G G+ P + + T + +G IIG+ G + ++R+ SG++I I
Sbjct: 301 NLMGQSSGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKI 351
Query: 476 SDSS--TPERIVTVIGSMDSLFRAFSLI 501
++++ + ER +T+ G+ ++ A LI
Sbjct: 352 ANATEGSSERQITITGTPANISLAQYLI 379
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA---GLNASNPLAAALP 823
Q + + V +L + G P+S P+ G ++PLAA+
Sbjct: 188 --IQCVKQICVVMLESPPKGAT---------IPYRPKPASTPVIFAGGQVRADPLAASTA 236
Query: 824 QLAQILTKP 832
L+ +L P
Sbjct: 237 NLSLLLQHP 245
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 210/344 (61%), Gaps = 14/344 (4%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVI 220
Query: 618 IGNQFGMQNSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
+ L + + + PL G + L+ A+ L
Sbjct: 221 FAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTK-LHQLAMQQTPFPPL 279
Query: 673 -KTN-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
+TN P + + N G S + T E+T+PN+LIG +IG+ GTKI
Sbjct: 280 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 339
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 340 EIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 380
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 206/336 (61%), Gaps = 14/336 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVIFAGGQVRA 228
Query: 181 NSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL-KTN-HMP 233
+ L + + + PL G + L+ A+ L +TN P
Sbjct: 229 DPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTK-LHQLAMQQTPFPPLGQTNPAFP 287
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
+ + N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA
Sbjct: 288 GEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 347
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 348 QIKIANAT---EGSSERQITITGTPANISLAQYLIN 380
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 46/268 (17%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
Q + + V +L + G GG+ D ++ S+A L+
Sbjct: 188 --IQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAA-----STANLSL 240
Query: 367 LNASNPLAAALPQLAQILTKPG--ALNAL----TSLSALGGLSDLLGG-----GSSGGGS 415
L PL A Q + P L+ L T LG + G SS
Sbjct: 241 LLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQ 300
Query: 416 GNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI 475
G G+ P + + T + +G IIG+ G + ++R+ SG++I I
Sbjct: 301 NLMGQSSGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKI 351
Query: 476 SDSS--TPERIVTVIGSMDSLFRAFSLI 501
++++ + ER +T+ G+ ++ A LI
Sbjct: 352 ANATEGSSERQITITGTPANISLAQYLI 379
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA---GLNASNPLAAALP 823
Q + + V +L + G P+S P+ G ++PLAA+
Sbjct: 188 --IQCVKQICVVMLESPPKGAT---------IPYRPKPASTPVIFAGGQVRADPLAASTA 236
Query: 824 QLAQILTKP 832
L+ +L P
Sbjct: 237 NLSLLLQHP 245
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 43 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 94
+G D+ + L + + H G ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAFWAPSVLPHSTLSTLSHHPQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 539
+G D+ + L + + H G ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAFWAPSVLPHSTLSTLSHHPQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 210/344 (61%), Gaps = 14/344 (4%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVI 220
Query: 618 IGNQFGMQNSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
+ L + + + PL G + L+ A+ L
Sbjct: 221 FAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTK-LHQLAMQQTPFPPL 279
Query: 673 -KTN-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
+TN P + + N G S + T E+T+PN+LIG +IG+ GTKI
Sbjct: 280 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 339
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 340 EIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 380
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 206/336 (61%), Gaps = 14/336 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVIFAGGQVRA 228
Query: 181 NSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL-KTN-HMP 233
+ L + + + PL G + L+ A+ L +TN P
Sbjct: 229 DPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTK-LHQLAMQQTPFPPLGQTNPAFP 287
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
+ + N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA
Sbjct: 288 GEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 347
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 348 QIKIANAT---EGSSERQITITGTPANISLAQYLIN 380
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 46/268 (17%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
Q + + V +L + G GG+ D ++ S+A L+
Sbjct: 188 --IQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAA-----STANLSL 240
Query: 367 LNASNPLAAALPQLAQILTKPG--ALNAL----TSLSALGGLSDLLGG-----GSSGGGS 415
L PL A Q + P L+ L T LG + G SS
Sbjct: 241 LLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQ 300
Query: 416 GNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI 475
G G+ P + + T + +G IIG+ G + ++R+ SG++I I
Sbjct: 301 NLMGQSSGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKI 351
Query: 476 SDSS--TPERIVTVIGSMDSLFRAFSLI 501
++++ + ER +T+ G+ ++ A LI
Sbjct: 352 ANATEGSSERQITITGTPANISLAQYLI 379
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA---GLNASNPLAAALP 823
Q + + V +L + G P+S P+ G ++PLAA+
Sbjct: 188 --IQCVKQICVVMLESPPKGAT---------IPYRPKPASTPVIFAGGQVRADPLAASTA 236
Query: 824 QLAQILTKP 832
L+ +L P
Sbjct: 237 NLSLLLQHP 245
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 211/356 (59%), Gaps = 38/356 (10%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVI 220
Query: 618 I-GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G Q + +PLA A L A+ +L H
Sbjct: 221 FAGGQ------------VRADPLAASTA-NLSLLLQPPPLPAYTIQGQYAIPHPELTKLH 267
Query: 677 MPRNQNQNQNQHNRNNRDGPSQK-----TNQQQNQI-------------TKEMTVPNELI 718
Q + N P +K + + QN + T E+T+PN+LI
Sbjct: 268 QLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLI 327
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 328 GCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 380
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 207/348 (59%), Gaps = 38/348 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGM 179
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P + G Q
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVIFAGGQ--- 225
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ +PLA A L A+ +L H Q
Sbjct: 226 ---------VRADPLAASTA-NLSLLLQPPPLPAYTIQGQYAIPHPELTKLHQLAMQQTP 275
Query: 240 QNQHNRNNRDGPSQK-----TNQQQNQI-------------TKEMTVPNELIGAVIGKGG 281
+ N P +K + + QN + T E+T+PN+LIG +IG+ G
Sbjct: 276 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQG 335
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
TKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 336 TKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 380
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 322 ALAQYLINMSVELLRANLNG 341
Q + + V +L + G
Sbjct: 188 --IQCVKQICVVMLESPPKG 205
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 767 ALAQYLINMSVELLRANLNG 786
Q + + V +L + G
Sbjct: 188 --IQCVKQICVVMLESPPKG 205
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 43 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 94
+G D+++ L + + H G ES++ + +RL++ + GSI
Sbjct: 1 MGEGDTIWAPSVLPHGTLSTLSHHLQPHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 539
+G D+++ L + + H G ES++ + +RL++ + GSI
Sbjct: 1 MGEGDTIWAPSVLPHGTLSTLSHHLQPHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 210/344 (61%), Gaps = 14/344 (4%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVI 188
Query: 618 IGNQFGMQNSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
+ L + + + PL G + L+ A+ L
Sbjct: 189 FAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTK-LHQLAMQQTPFPPL 247
Query: 673 -KTN-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
+TN P + + N G S + T E+T+PN+LIG +IG+ GTKI
Sbjct: 248 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 307
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 308 EIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 348
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 206/336 (61%), Gaps = 14/336 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVIFAGGQVRA 196
Query: 181 NSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL-KTN-HMP 233
+ L + + + PL G + L+ A+ L +TN P
Sbjct: 197 DPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTK-LHQLAMQQTPFPPLGQTNPAFP 255
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
+ + N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA
Sbjct: 256 GEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 315
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 316 QIKIANAT---EGSSERQITITGTPANISLAQYLIN 348
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 46/268 (17%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
Q + + V +L + G GG+ D ++ S+A L+
Sbjct: 156 --IQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAA-----STANLSL 208
Query: 367 LNASNPLAAALPQLAQILTKPG--ALNAL----TSLSALGGLSDLLGG-----GSSGGGS 415
L PL A Q + P L+ L T LG + G SS
Sbjct: 209 LLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQ 268
Query: 416 GNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI 475
G G+ P + + T + +G IIG+ G + ++R+ SG++I I
Sbjct: 269 NLMGQSSGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Query: 476 SDSS--TPERIVTVIGSMDSLFRAFSLI 501
++++ + ER +T+ G+ ++ A LI
Sbjct: 320 ANATEGSSERQITITGTPANISLAQYLI 347
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA---GLNASNPLAAALP 823
Q + + V +L + G P+S P+ G ++PLAA+
Sbjct: 156 --IQCVKQICVVMLESPPKGAT---------IPYRPKPASTPVIFAGGQVRADPLAASTA 204
Query: 824 QLAQILTKP 832
L+ +L P
Sbjct: 205 NLSLLLQHP 213
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 210/344 (61%), Gaps = 14/344 (4%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVI 188
Query: 618 IGNQFGMQNSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
+ L + + + PL G + L+ A+ L
Sbjct: 189 FAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTK-LHQLAMQQTPLPPL 247
Query: 673 -KTN-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
+TN P + + N G S + T E+T+PN+LIG +IG+ GTKI
Sbjct: 248 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 307
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 308 EIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 348
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 206/336 (61%), Gaps = 14/336 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVIFAGGQVRA 196
Query: 181 NSLMGAPD-----MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL-KTN-HMP 233
+ L + + + PL G + L+ A+ L +TN P
Sbjct: 197 DPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTK-LHQLAMQQTPLPPLGQTNPAFP 255
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
+ + N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA
Sbjct: 256 GEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 315
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 316 QIKIANAT---EGSSERQITITGTPANISLAQYLIN 348
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 46/268 (17%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
Q + + V +L + G GG+ D ++ S+A L+
Sbjct: 156 --IQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAA-----STANLSL 208
Query: 367 LNASNPLAAALPQLAQILTKPG--ALNAL----TSLSALGGLSDLLGG-----GSSGGGS 415
L PL A Q + P L+ L T L LG + G SS
Sbjct: 209 LLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPLPPLGQTNPAFPGEKLPLHSSEEAQ 268
Query: 416 GNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI 475
G G+ P + + T + +G IIG+ G + ++R+ SG++I I
Sbjct: 269 NLMGQSSGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Query: 476 SDSS--TPERIVTVIGSMDSLFRAFSLI 501
++++ + ER +T+ G+ ++ A LI
Sbjct: 320 ANATEGSSERQITITGTPANISLAQYLI 347
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA---GLNASNPLAAALP 823
Q + + V +L + G P+S P+ G ++PLAA+
Sbjct: 156 --IQCVKQICVVMLESPPKGAT---------IPYRPKPASTPVIFAGGQVRADPLAASTA 204
Query: 824 QLAQILTKP 832
L+ +L P
Sbjct: 205 NLSLLLQHP 213
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 215/352 (61%), Gaps = 30/352 (8%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR 496
GV +R +M GKEVGSIIGK GETVK++REES +++ IS+ S PERI+T+ GS DS+FR
Sbjct: 13 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDSVFR 72
Query: 497 AFSLITKNIEEFHKNQNKHLGGNG---ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
AF++IT +EE L NG + LRL++PASQCGS+IGKGG++IK IRE+
Sbjct: 73 AFTMITYKLEE----DLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRES 128
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
+GA + VA D+LPNSTER V I G D+V Q + IC ++++SPPKGATIPYRP P A
Sbjct: 129 TGAQIQVAGDLLPNSTERGVTISGNQDSVIQCVKLICTVILESPPKGATIPYRPSPSPAA 188
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQ 671
LI N + A + +PL +A GL + G+ + LA L
Sbjct: 189 --LLIAG-----NQVFEASEFAPHPLYSVAQGGLDLQQAYTLQNQYGIPHSELAKLHQLS 241
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFE 731
++ P Q + P +N Q +Q E+ +PN+LIG++IG+ GTKI E
Sbjct: 242 VQQGLSPIAQPASAVI--------PGMDSNSQTSQ---ELLIPNDLIGSIIGRQGTKINE 290
Query: 732 IRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 783
IR++SGA I+I + + ++DR +T+TGTP +I LAQYLI +E ++
Sbjct: 291 IRQVSGAQIKI---GSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAKST 339
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 210/343 (61%), Gaps = 30/343 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++REES +++ IS+ S PERI+T+ GS DS+FRAF++IT +
Sbjct: 22 MHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDSVFRAFTMITYKL 81
Query: 61 EEFHKNQNKHLGGNG---ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
EE L NG + LRL++PASQCGS+IGKGG++IK IRE++GA + VA
Sbjct: 82 EE----DLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAG 137
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQF 177
D+LPNSTER V I G D+V Q + IC ++++SPPKGATIPYRP P A LI
Sbjct: 138 DLLPNSTERGVTISGNQDSVIQCVKLICTVILESPPKGATIPYRPSPSPAA--LLIAG-- 193
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQLKTNHMPRN 235
N + A + +PL +A GL + G+ + LA L ++ P
Sbjct: 194 ---NQVFEASEFAPHPLYSVAQGGLDLQQAYTLQNQYGIPHSELAKLHQLSVQQGLSPIA 250
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
Q + P +N Q +Q E+ +PN+LIG++IG+ GTKI EIR++SGA I
Sbjct: 251 QPASAVI--------PGMDSNSQTSQ---ELLIPNDLIGSIIGRQGTKINEIRQVSGAQI 299
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
+I + + ++DR +T+TGTP +I LAQYLI +E ++
Sbjct: 300 KI---GSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAKST 339
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
N + G G + LRL++ + GSIIGK G +K IRE S A V ++ P E
Sbjct: 2 NCEQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCP---E 58
Query: 126 REVNIKGVPDAVTQAIYQI 144
R + I G D+V +A I
Sbjct: 59 RIITITGSTDSVFRAFTMI 77
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 511 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 570
N + G G + LRL++ + GSIIGK G +K IRE S A V ++ P E
Sbjct: 2 NCEQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCP---E 58
Query: 571 REVNIKGVPDAVTQAIYQI 589
R + I G D+V +A I
Sbjct: 59 RIITITGSTDSVFRAFTMI 77
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 208/337 (61%), Gaps = 51/337 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
+EVGSIIGK G+ +KK REESG+KI ISD S PERIVTV GS +++ +AFSLI + EE
Sbjct: 2 QEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEAILKAFSLIARKFEEV 61
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
+ + + G + + LRLIVPASQCGS+IGKGGS+IK IRE + AS+ VAS+MLPNS
Sbjct: 62 STSSHSN-GSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIRE-ARASIQVASEMLPNS 119
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFGMQN 181
TER V + G DA+T+ IYQIC +M++SPPKGATIPYR P+ A P + G + +Q
Sbjct: 120 TERAVTVSGTADAITKCIYQICCVMMESPPKGATIPYR--PKPAMPPVIFAGGQAYTVQG 177
Query: 182 SL-MGAPDMGN-NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ PD+ + LA A L G+S G +
Sbjct: 178 QYAIPHPDLTKLHQLALQHAPLLPGHSVGAIN---------------------------- 209
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
Q + T EMT+PN+LIG +IGKGG+KI EIR++SGA I+IS
Sbjct: 210 ------------PQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISN 257
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLR 336
S EE S DRT+T++GTP+AI LAQYLIN S+EL +
Sbjct: 258 S---EEGSKDRTVTISGTPEAINLAQYLINTSMELHK 291
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/337 (47%), Positives = 208/337 (61%), Gaps = 51/337 (15%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
+EVGSIIGK G+ +KK REESG+KI ISD S PERIVTV GS +++ +AFSLI + EE
Sbjct: 2 QEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEAILKAFSLIARKFEEV 61
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
+ + + G + + LRLIVPASQCGS+IGKGGS+IK IRE + AS+ VAS+MLPNS
Sbjct: 62 STSSHSN-GSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIRE-ARASIQVASEMLPNS 119
Query: 569 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFGMQN 626
TER V + G DA+T+ IYQIC +M++SPPKGATIPYR P+ A P + G + +Q
Sbjct: 120 TERAVTVSGTADAITKCIYQICCVMMESPPKGATIPYR--PKPAMPPVIFAGGQAYTVQG 177
Query: 627 SL-MGAPDMGN-NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 684
+ PD+ + LA A L G+S G +
Sbjct: 178 QYAIPHPDLTKLHQLALQHAPLLPGHSVGAIN---------------------------- 209
Query: 685 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
Q + T EMT+PN+LIG +IGKGG+KI EIR++SGA I+IS
Sbjct: 210 ------------PQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISN 257
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLR 781
S EE S DRT+T++GTP+AI LAQYLIN S+EL +
Sbjct: 258 S---EEGSKDRTVTISGTPEAINLAQYLINTSMELHK 291
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEF 63
+G IIGK G + ++R+ SG+ I IS+S + +R VT+ G+ +++ A LI ++ E
Sbjct: 231 IGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLINTSM-EL 289
Query: 64 HKNQNKHLGGN 74
HKN L N
Sbjct: 290 HKNLTLDLTSN 300
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEF 508
+G IIGK G + ++R+ SG+ I IS+S + +R VT+ G+ +++ A LI ++ E
Sbjct: 231 IGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLINTSM-EL 289
Query: 509 HKNQNKHLGGN 519
HKN L N
Sbjct: 290 HKNLTLDLTSN 300
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 210/356 (58%), Gaps = 38/356 (10%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVI 188
Query: 618 I-GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G Q + +PLA A L A+ L H
Sbjct: 189 FAGGQ------------VRADPLAASTA-NLSLLLQPPPLPAYTIQGQYAIPHPDLTKLH 235
Query: 677 MPRNQNQNQNQHNRNNRDGPSQK-----TNQQQNQI-------------TKEMTVPNELI 718
Q + N P +K + + QN + T E+T+PN+LI
Sbjct: 236 QLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLI 295
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 296 GCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 348
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 206/348 (59%), Gaps = 38/348 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGM 179
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P + G Q
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVIFAGGQ--- 193
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ +PLA A L A+ L H Q
Sbjct: 194 ---------VRADPLAASTA-NLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTP 243
Query: 240 QNQHNRNNRDGPSQK-----TNQQQNQI-------------TKEMTVPNELIGAVIGKGG 281
+ N P +K + + QN + T E+T+PN+LIG +IG+ G
Sbjct: 244 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQG 303
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
TKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 304 TKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 348
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 322 ALAQYLINMSVELLRANLNG 341
Q + + V +L + G
Sbjct: 156 --IQCVKQICVVMLESPPKG 173
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 767 ALAQYLINMSVELLRANLNG 786
Q + + V +L + G
Sbjct: 156 --IQCVKQICVVMLESPPKG 173
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 210/356 (58%), Gaps = 38/356 (10%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVI 188
Query: 618 I-GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G Q + +PLA A L A+ L H
Sbjct: 189 FAGGQ------------VRADPLAASTA-NLSLLLQPPPLPAYTIQGQYAIPHPDLTKLH 235
Query: 677 MPRNQNQNQNQHNRNNRDGPSQK-----TNQQQNQI-------------TKEMTVPNELI 718
Q + N P +K + + QN + T E+T+PN+LI
Sbjct: 236 QLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDVSPPASTHELTIPNDLI 295
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 296 GCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 348
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 206/348 (59%), Gaps = 38/348 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGM 179
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P + G Q
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVIFAGGQ--- 193
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ +PLA A L A+ L H Q
Sbjct: 194 ---------VRADPLAASTA-NLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTP 243
Query: 240 QNQHNRNNRDGPSQK-----TNQQQNQI-------------TKEMTVPNELIGAVIGKGG 281
+ N P +K + + QN + T E+T+PN+LIG +IG+ G
Sbjct: 244 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDVSPPASTHELTIPNDLIGCIIGRQG 303
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
TKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 304 TKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 348
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 322 ALAQYLINMSVELLRANLNG 341
Q + + V +L + G
Sbjct: 156 --IQCVKQICVVMLESPPKG 173
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 767 ALAQYLINMSVELLRANLNG 786
Q + + V +L + G
Sbjct: 156 --IQCVKQICVVMLESPPKG 173
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 205/350 (58%), Gaps = 40/350 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ S+PERIVT+ G + +FRA
Sbjct: 15 VTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGPTEGIFRA 74
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
FS+I + EE N S+ + LRL+ P SQCGS+IGKGGS+IK IRET+GA
Sbjct: 75 FSMIAQKFEE--DITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGA 132
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V VA DMLP+STER V I G P A+TQ + IC +M++SPPKGATIPYRP AG
Sbjct: 133 QVQVAGDMLPDSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPKILPAGAHA 192
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
++ Q A + G A A L H
Sbjct: 193 VLAPQHSAH------------------AFAIPGQY--------------AFAHQDLTKLH 220
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
Q+ ++N P ++ + T+E+ +PN+LIG +IG+ G+KI EIR++S
Sbjct: 221 QLAMQHIPLPSLGQSNPTFPGLDSSASTS--TQELAIPNDLIGCIIGRQGSKINEIRQVS 278
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNG 786
GA I+I+ ++ + S R +T+TG+P +I++AQYLIN S+E+ R +
Sbjct: 279 GAHIKIASAT---DGSAVRQVTITGSPASISIAQYLINASLEMARYTMQA 325
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 201/342 (58%), Gaps = 40/342 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ S+PERIVT+ G + +FRAFS+I +
Sbjct: 23 MHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGPTEGIFRAFSMIAQKF 82
Query: 61 EEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EE N S+ + LRL+ P SQCGS+IGKGGS+IK IRET+GA V VA DM
Sbjct: 83 EE--DITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDM 140
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
LP+STER V I G P A+TQ + IC +M++SPPKGATIPYRP AG ++ Q
Sbjct: 141 LPDSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPKILPAGAHAVLAPQHSA 200
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
A + G A A L H Q+
Sbjct: 201 H------------------AFAIPGQY--------------AFAHQDLTKLHQLAMQHIP 228
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
++N P ++ + T+E+ +PN+LIG +IG+ G+KI EIR++SGA I+I+
Sbjct: 229 LPSLGQSNPTFPGLDSSASTS--TQELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKIAS 286
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNG 341
++ + S R +T+TG+P +I++AQYLIN S+E+ R +
Sbjct: 287 AT---DGSAVRQVTITGSPASISIAQYLINASLEMARYTMQA 325
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL++ + GSIIGK G +K +RE SGA + ++ +S ER V I G + + +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---SSPERIVTITGPTEGIFR 73
Query: 140 AIYQI 144
A I
Sbjct: 74 AFSMI 78
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 203/340 (59%), Gaps = 48/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 14 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKA 73
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA
Sbjct: 74 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 133 VQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 190
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G A L +S +
Sbjct: 191 FSGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQA--TPAFPGLDASPPAS 244
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 245 TH---------------------------------ELTIPNDLIGCIIGRQGTKINEIRQ 271
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ + E S++R IT+TGTP I+LAQYLIN
Sbjct: 272 MSGAQIKIANAM---EGSSERQITITGTPANISLAQYLIN 308
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 199/332 (59%), Gaps = 48/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 22 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFAMIAYKF 81
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA V VA DML
Sbjct: 82 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDML 140
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 141 PNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFSGGQAYT 198
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L + +G A L +S + H
Sbjct: 199 IQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQA--TPAFPGLDASPPASTH------ 246
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 247 ---------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 279
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ + E S++R IT+TGTP I+LAQYLIN
Sbjct: 280 ANAM---EGSSERQITITGTPANISLAQYLIN 308
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G D + +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDTIFK 72
Query: 140 AIYQI 144
A I
Sbjct: 73 AFAMI 77
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 215/353 (60%), Gaps = 22/353 (6%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR 496
GV +R +M GKEVGSIIGK GETVK++REES +++ IS+ S PERI+T+ GS DS+FR
Sbjct: 24 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDSVFR 83
Query: 497 AFSLITKNIEEFHKNQNKHLGGNG---ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
AF++IT +EE L NG + LRL++PASQCGS+IGKGG++IK IRE+
Sbjct: 84 AFTMITYKLEE----DLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRES 139
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
+GA + VA D+LPNSTER V I G D+V Q + IC ++++SPPKGATIPYRP P A
Sbjct: 140 TGAQIQVAGDLLPNSTERGVTISGNQDSVIQCVKLICTVILESPPKGATIPYRPTPSPAA 199
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQ 671
LI N + A D +PL + GL + G+ + LA L
Sbjct: 200 --LLIAG-----NQVFEASDFAPHPLYSVTQGGLDLQQAYALQNQYGIPHSELAKLHQLS 252
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDG-PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
++ P Q + + PS + Q ++E+ +PN+LIG++IG+ GTKI
Sbjct: 253 VQQGLSPIAQPASTIMPGKLLLHFLPSGMDSTSQT--SQELLIPNDLIGSIIGRQGTKIN 310
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 783
EIR++SGA I+I + + ++DR +T+TGTP +I LAQYLI +E ++
Sbjct: 311 EIRQVSGAQIKI---GSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAKST 360
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/344 (43%), Positives = 210/344 (61%), Gaps = 22/344 (6%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++REES +++ IS+ S PERI+T+ GS DS+FRAF++IT +
Sbjct: 33 MHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDSVFRAFTMITYKL 92
Query: 61 EEFHKNQNKHLGGNG---ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
EE L NG + LRL++PASQCGS+IGKGG++IK IRE++GA + VA
Sbjct: 93 EE----DLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAG 148
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQF 177
D+LPNSTER V I G D+V Q + IC ++++SPPKGATIPYRP P A LI
Sbjct: 149 DLLPNSTERGVTISGNQDSVIQCVKLICTVILESPPKGATIPYRPTPSPAA--LLIAG-- 204
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQLKTNHMPRN 235
N + A D +PL + GL + G+ + LA L ++ P
Sbjct: 205 ---NQVFEASDFAPHPLYSVTQGGLDLQQAYALQNQYGIPHSELAKLHQLSVQQGLSPIA 261
Query: 236 QNQNQNQHNRNNRDG-PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
Q + + PS + Q ++E+ +PN+LIG++IG+ GTKI EIR++SGA
Sbjct: 262 QPASTIMPGKLLLHFLPSGMDSTSQT--SQELLIPNDLIGSIIGRQGTKINEIRQVSGAQ 319
Query: 295 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
I+I + + ++DR +T+TGTP +I LAQYLI +E ++
Sbjct: 320 IKI---GSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAKST 360
Score = 46.6 bits (109), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 63 FHK----NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
FH N + G G + LRL++ + GSIIGK G +K IRE S A V ++
Sbjct: 6 FHSHITMNCEQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG 65
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQI 144
P ER + I G D+V +A I
Sbjct: 66 SCP---ERIITITGSTDSVFRAFTMI 88
Score = 46.6 bits (109), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 508 FHK----NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
FH N + G G + LRL++ + GSIIGK G +K IRE S A V ++
Sbjct: 6 FHSHITMNCEQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG 65
Query: 564 MLPNSTEREVNIKGVPDAVTQAIYQI 589
P ER + I G D+V +A I
Sbjct: 66 SCP---ERIITITGSTDSVFRAFTMI 88
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 205/346 (59%), Gaps = 60/346 (17%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 14 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKA 73
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA
Sbjct: 74 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 133 VQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 190
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGG------GLNAAALAALA 668
G + +Q + PD L L L + +G GL+AA A+
Sbjct: 191 FSGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQTTPAFPGLDAAPPAS-- 244
Query: 669 SSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTK 728
T E+T+PN+LIG +IG+ GTK
Sbjct: 245 ---------------------------------------THELTIPNDLIGCIIGRQGTK 265
Query: 729 IFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
I EIR++SGA I+I+ + E S++R IT+TGTP I+LAQYLIN
Sbjct: 266 INEIRQMSGAQIKIANAM---EGSSERQITITGTPANISLAQYLIN 308
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/338 (44%), Positives = 201/338 (59%), Gaps = 60/338 (17%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 22 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFAMIAYKF 81
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA V VA DML
Sbjct: 82 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDML 140
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 141 PNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFSGGQAYT 198
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGG------GLNAAALAALASSQLKTNH 231
+Q + PD L L L + +G GL+AA A+
Sbjct: 199 IQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQTTPAFPGLDAAPPAS---------- 244
Query: 232 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
T E+T+PN+LIG +IG+ GTKI EIR++S
Sbjct: 245 -------------------------------THELTIPNDLIGCIIGRQGTKINEIRQMS 273
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
GA I+I+ + E S++R IT+TGTP I+LAQYLIN
Sbjct: 274 GAQIKIANAM---EGSSERQITITGTPANISLAQYLIN 308
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G D + +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDTIFK 72
Query: 140 AIYQI 144
A I
Sbjct: 73 AFAMI 77
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 203/340 (59%), Gaps = 48/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 14 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKA 73
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA
Sbjct: 74 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P + P +
Sbjct: 133 VQVAGDMLPNSTERAVTISGTPEAIIQCVRQICVVMLESPPKGATIPYRPKPTST--PVI 190
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G A L +S +
Sbjct: 191 FSGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQ--TTPAFPGLDASPPAS 244
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H E+T+PN+LIG +IG+ GTKI EIR+
Sbjct: 245 TH---------------------------------ELTIPNDLIGCIIGRQGTKINEIRQ 271
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ + E S++R IT+TGTP I+LAQYLIN
Sbjct: 272 MSGAQIKIANAM---EGSSERQITITGTPANISLAQYLIN 308
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 149/332 (44%), Positives = 199/332 (59%), Gaps = 48/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 22 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFAMIAYKF 81
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA V VA DML
Sbjct: 82 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDML 140
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P + P + G +
Sbjct: 141 PNSTERAVTISGTPEAIIQCVRQICVVMLESPPKGATIPYRPKPTST--PVIFSGGQAYT 198
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L + +G A L +S + H
Sbjct: 199 IQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQ--TTPAFPGLDASPPASTH------ 246
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I
Sbjct: 247 ---------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 279
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ + E S++R IT+TGTP I+LAQYLIN
Sbjct: 280 ANAM---EGSSERQITITGTPANISLAQYLIN 308
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G D + +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDTIFK 72
Query: 140 AIYQI 144
A I
Sbjct: 73 AFAMI 77
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 174/453 (38%), Positives = 248/453 (54%), Gaps = 57/453 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ S+PERIVT+ G+ +++FRAF++I +
Sbjct: 23 MHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGATEAIFRAFAMIAQKF 82
Query: 61 EEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
EE + + + + + + LRL+ P SQCGS+IGKGGS+IK IRET+GA V VA D
Sbjct: 83 EE---DISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGD 139
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIG-NQF 177
MLP+STER V I G P A+TQ + IC +M++SPPKGATIPYRP G ++ Q
Sbjct: 140 MLPDSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPKAVTVGVHAVLAPQQS 199
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
++ G + L L QL H+P +
Sbjct: 200 AHAFAIPGQYTFAHQDLTKL---------------------------HQLAMQHIPL-PS 231
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
Q+ D PS T+ Q EM +PN+ IG +IG+ G+KI EIR++SGA I+I
Sbjct: 232 LGQSNPTFPGLD-PSAPTSSQ------EMAIPNDFIGCIIGRQGSKINEIRQVSGAHIKI 284
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 357
+ ++ + S R +T+TG+P +I +AQYLIN S+E+ + + D N
Sbjct: 285 ASTT---DGSAVRQVTITGSPASINVAQYLINASLEMAKYTMQAASSAT------PVDLN 335
Query: 358 L--PSSAPLAGLNASN--PLAAALPQLAQI-LTKPGALNALTSLSALGGLSDLLGGGSSG 412
L SAP A A++ LAAA P I + P L A+ + +S LLG S
Sbjct: 336 LGFSQSAPTASTAATSMAVLAAANPAPTTINVHSPSTLPAIQNPHYAIPVSSLLGMKSLP 395
Query: 413 GGSGNSGGFGGVPQGPNY--ANIQTTGVQRRMR 443
+ + + QG ++ A + T+GV++ R
Sbjct: 396 LLAVHPAAASSLTQGLSHYTAKMPTSGVKKSER 428
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 221/387 (57%), Gaps = 48/387 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ S+PERIVT+ G+ +++FRA
Sbjct: 15 VTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGATEAIFRA 74
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
F++I + EE + + + + + + LRL+ P SQCGS+IGKGGS+IK IRET+G
Sbjct: 75 FAMIAQKFEE---DISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTG 131
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP 615
A V VA DMLP+STER V I G P A+TQ + IC +M++SPPKGATIPYRP G
Sbjct: 132 AQVQVAGDMLPDSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPKAVTVGVH 191
Query: 616 GLIG-NQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
++ Q ++ G + L L QL
Sbjct: 192 AVLAPQQSAHAFAIPGQYTFAHQDLTKL---------------------------HQLAM 224
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H+P + Q+ D PS T+ Q EM +PN+ IG +IG+ G+KI EIR+
Sbjct: 225 QHIPL-PSLGQSNPTFPGLD-PSAPTSSQ------EMAIPNDFIGCIIGRQGSKINEIRQ 276
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNM 794
+SGA I+I+ ++ + S R +T+TG+P +I +AQYLIN S+E+ + +
Sbjct: 277 VSGAHIKIASTT---DGSAVRQVTITGSPASINVAQYLINASLEMAKYTMQAASSATPVD 333
Query: 795 DDFSSDNNLPSSAP----LAGLNASNP 817
+ + P+++ +A L A+NP
Sbjct: 334 LNLGFSQSAPTASTAATSMAVLAAANP 360
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL++ + GSIIGK G +K +RE SGA + ++ +S ER V I G +A+ +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---SSPERIVTITGATEAIFR 73
Query: 140 AIYQI 144
A I
Sbjct: 74 AFAMI 78
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/351 (42%), Positives = 206/351 (58%), Gaps = 42/351 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ S+PERIVT+ G + +FRA
Sbjct: 15 VTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGPTEGIFRA 74
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
FS+I + EE N S+ + LRL+ P SQCGS+IGKGGS+IK IRET+GA
Sbjct: 75 FSMIAQKFEE--DITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGA 132
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V VA DMLP+STER V I G P A+TQ + IC +M++SPPKGATIPYRP AG
Sbjct: 133 QVQVAGDMLPDSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPKVIPAGTHA 192
Query: 617 LIGNQFGMQN-SLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
++ Q Q ++ G + L L QL
Sbjct: 193 VLAPQHSAQAFAIPGQYAFAHQDLTKL---------------------------HQLAMQ 225
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
H+P + Q+ D + ++Q E+ +PN+ IG +IG+ G+KI EIR++
Sbjct: 226 HIPL-PSLGQSNPTFPGLDASAPTSSQ-------ELAIPNDFIGCIIGRQGSKINEIRQV 277
Query: 736 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNG 786
SGA I+I+ ++ + S R +T+TG+P +I++AQYLIN S+E+ + +
Sbjct: 278 SGAHIKIASAT---DGSAMRQVTITGSPASISVAQYLINASLEMAKYTMQA 325
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 202/343 (58%), Gaps = 42/343 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ S+PERIVT+ G + +FRAFS+I +
Sbjct: 23 MHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGPTEGIFRAFSMIAQKF 82
Query: 61 EEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EE N S+ + LRL+ P SQCGS+IGKGGS+IK IRET+GA V VA DM
Sbjct: 83 EE--DITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDM 140
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
LP+STER V I G P A+TQ + IC +M++SPPKGATIPYRP AG ++ Q
Sbjct: 141 LPDSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPKVIPAGTHAVLAPQHSA 200
Query: 180 QN-SLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
Q ++ G + L L QL H+P +
Sbjct: 201 QAFAIPGQYAFAHQDLTKL---------------------------HQLAMQHIPL-PSL 232
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
Q+ D + ++Q E+ +PN+ IG +IG+ G+KI EIR++SGA I+I+
Sbjct: 233 GQSNPTFPGLDASAPTSSQ-------ELAIPNDFIGCIIGRQGSKINEIRQVSGAHIKIA 285
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNG 341
++ + S R +T+TG+P +I++AQYLIN S+E+ + +
Sbjct: 286 SAT---DGSAMRQVTITGSPASISVAQYLINASLEMAKYTMQA 325
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL++ + GSIIGK G +K +RE SGA + ++ +S ER V I G + + +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---SSPERIVTITGPTEGIFR 73
Query: 140 AIYQI 144
A I
Sbjct: 74 AFSMI 78
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 205/344 (59%), Gaps = 46/344 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS D++FRA S+I
Sbjct: 30 LRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEGSCPERITTITGSTDAVFRAVSMI 89
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE GG + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 90 AFKLEE-DLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRETTGAQVQVA 148
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GN 620
D+LPNSTER V + GVPDA+ Q + QIC ++++SPPKGATIPY P + GP L+ N
Sbjct: 149 GDLLPNSTERAVTVSGVPDAIIQCVRQICAVILESPPKGATIPYH--PNLSLGPVLLSAN 206
Query: 621 Q-FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR 679
Q F MQ G GG++ A +A L Q + H
Sbjct: 207 QGFSMQ----------------------------GQYGGISQAEVAKL---QQLSGHPVS 235
Query: 680 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 739
+ Q D SQ ++Q E VPN+LIG +IG+ G+KI EIR++SGA
Sbjct: 236 FSSLGQTPSIVAGLDTNSQNSSQ-------EFLVPNDLIGCIIGRQGSKISEIRQMSGAH 288
Query: 740 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 783
I+I + E S +R +T+TGTP +I LAQYLI+ +E ++
Sbjct: 289 IKIGN---QTEGSAERHVTITGTPVSITLAQYLISACLETAKST 329
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 202/340 (59%), Gaps = 46/340 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS D++FRA S+I +
Sbjct: 34 MHGKEVGSIIGKKGETVKRIREQSTARITISEGSCPERITTITGSTDAVFRAVSMIAFKL 93
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE GG + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 94 EE-DLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRETTGAQVQVAGDLL 152
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQ-FG 178
PNSTER V + GVPDA+ Q + QIC ++++SPPKGATIPY P + GP L+ NQ F
Sbjct: 153 PNSTERAVTVSGVPDAIIQCVRQICAVILESPPKGATIPYH--PNLSLGPVLLSANQGFS 210
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
MQ G GG++ A +A L Q + H +
Sbjct: 211 MQ----------------------------GQYGGISQAEVAKL---QQLSGHPVSFSSL 239
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
Q D SQ ++Q E VPN+LIG +IG+ G+KI EIR++SGA I+I
Sbjct: 240 GQTPSIVAGLDTNSQNSSQ-------EFLVPNDLIGCIIGRQGSKISEIRQMSGAHIKIG 292
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
+ E S +R +T+TGTP +I LAQYLI+ +E ++
Sbjct: 293 N---QTEGSAERHVTITGTPVSITLAQYLISACLETAKST 329
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 52/255 (20%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +P G++IGK G KI EIR+ +GA ++++ + +S +R +T++G PDAI
Sbjct: 112 VTLRLVIPASQCGSLIGKAGAKIKEIRETTGAQVQVA--GDLLPNSTERAVTVSGVPDAI 169
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
++ +R A + S P A +P
Sbjct: 170 ----------IQCVRQIC-------------------------AVILESPPKGATIPYHP 194
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGG-------SGNSGGFGGVPQGPN-YANI 433
+ P L+A S G GG S SG+ F + Q P+ A +
Sbjct: 195 NLSLGPVLLSANQGFSMQGQY-----GGISQAEVAKLQQLSGHPVSFSSLGQTPSIVAGL 249
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSM 491
T ++ +G IIG+ G + ++R+ SG+ I I + + + ER VT+ G+
Sbjct: 250 DTNSQNSSQEFLVPNDLIGCIIGRQGSKISEIRQMSGAHIKIGNQTEGSAERHVTITGTP 309
Query: 492 DSLFRAFSLITKNIE 506
S+ A LI+ +E
Sbjct: 310 VSITLAQYLISACLE 324
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G DAV +
Sbjct: 28 LTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEGSCP---ERITTITGSTDAVFR 84
Query: 140 AIYQICL 146
A+ I
Sbjct: 85 AVSMIAF 91
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G DAV +
Sbjct: 28 LTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEGSCP---ERITTITGSTDAVFR 84
Query: 585 AIYQICL 591
A+ I
Sbjct: 85 AVSMIAF 91
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 205/359 (57%), Gaps = 64/359 (17%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+RE+SG++I IS+ + PERIVT+ G D++F+A
Sbjct: 14 VTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEGNCPERIVTITGPTDAIFKA 73
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA
Sbjct: 74 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G P+A+ Q + QIC+++++SPPKGATIPYRP P A P +
Sbjct: 133 VQVAGDMLPNSTERAVTISGAPEAIIQCVKQICVVLLESPPKGATIPYRPKP--ASTPVI 190
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL-AALASSQLKTNH 676
GG + A L A+ A+ L H
Sbjct: 191 FS------------------------------------GGQVRADPLGASTANLSLLLQH 214
Query: 677 MPRNQNQNQNQHNRNNRD-GPSQKTNQQQNQIT--------------------KEMTVPN 715
P Q Q+ + D + QQ T E+T+PN
Sbjct: 215 QPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTIPN 274
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+LIG +IG+ GTKI EIR++SGA I+I+ + E S++R IT+TGTP I+LAQYLIN
Sbjct: 275 DLIGCIIGRQGTKINEIRQMSGAQIKIANAM---EGSSERQITITGTPANISLAQYLIN 330
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 201/351 (57%), Gaps = 64/351 (18%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+RE+SG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 22 MHGKEVGSIIGKKGETVKKMREDSGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 81
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA V VA DML
Sbjct: 82 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDML 140
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G P+A+ Q + QIC+++++SPPKGATIPYRP P A P +
Sbjct: 141 PNSTERAVTISGAPEAIIQCVKQICVVLLESPPKGATIPYRPKP--ASTPVIFS------ 192
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL-AALASSQLKTNHMPRNQNQN 239
GG + A L A+ A+ L H P
Sbjct: 193 ------------------------------GGQVRADPLGASTANLSLLLQHQPLPAYTI 222
Query: 240 QNQHNRNNRD-GPSQKTNQQQNQIT--------------------KEMTVPNELIGAVIG 278
Q Q+ + D + QQ T E+T+PN+LIG +IG
Sbjct: 223 QGQYAIPHPDLSKLHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIG 282
Query: 279 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ GTKI EIR++SGA I+I+ + E S++R IT+TGTP I+LAQYLIN
Sbjct: 283 RQGTKINEIRQMSGAQIKIANAM---EGSSERQITITGTPANISLAQYLIN 330
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG---NCPERIVTITGPTDAIFK 72
Query: 140 AIYQI 144
A I
Sbjct: 73 AFAMI 77
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 212/351 (60%), Gaps = 27/351 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVK++REES ++I IS+ S PERI+T+ G+ + +FRA
Sbjct: 3 VTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSCPERIITITGATECVFRA 62
Query: 498 FSLITKNIEEFHKNQNKHLGGNG---ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
F++IT +EE L NG + LRL++PASQCGS+IGKGGS+IK IRE +
Sbjct: 63 FTMITIKLEE----DLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKT 118
Query: 555 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG 614
GA V VA D+LPNSTER V I G DA+ Q + IC ++++SPPKGATIPYRP P G
Sbjct: 119 GAQVQVAGDLLPNSTERGVTISGSQDAIIQCVKLICTVILESPPKGATIPYRPSP-APGA 177
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQL 672
L GNQ + + ++PL +A GL + G+ + LA L +
Sbjct: 178 VLLAGNQ------VFETSEFASHPLFSVAQGGLDLQQAYTVQNQYGIPHSELAKLHQLSM 231
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
+ P Q Q + SQ +Q E+ +PN+LIG++IG+ GTKI EI
Sbjct: 232 QQGLGPIAQA-TATQVLPAGIESSSQTASQ-------ELLIPNDLIGSIIGRQGTKINEI 283
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 783
R++SGA I+I + + ++DR +T+TG+P +I LAQYLI +E ++
Sbjct: 284 RQVSGAQIKI---GSQLDSTSDRHVTITGSPISINLAQYLITSCLETAKST 331
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/343 (43%), Positives = 208/343 (60%), Gaps = 27/343 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++REES ++I IS+ S PERI+T+ G+ + +FRAF++IT +
Sbjct: 11 MHGKEVGSIIGKKGETVKRIREESSARINISEGSCPERIITITGATECVFRAFTMITIKL 70
Query: 61 EEFHKNQNKHLGGNG---ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
EE L NG + LRL++PASQCGS+IGKGGS+IK IRE +GA V VA
Sbjct: 71 EE----DLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQVAG 126
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQF 177
D+LPNSTER V I G DA+ Q + IC ++++SPPKGATIPYRP P G L GNQ
Sbjct: 127 DLLPNSTERGVTISGSQDAIIQCVKLICTVILESPPKGATIPYRPSP-APGAVLLAGNQ- 184
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQLKTNHMPRN 235
+ + ++PL +A GL + G+ + LA L ++ P
Sbjct: 185 -----VFETSEFASHPLFSVAQGGLDLQQAYTVQNQYGIPHSELAKLHQLSMQQGLGPIA 239
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
Q Q + SQ +Q E+ +PN+LIG++IG+ GTKI EIR++SGA I
Sbjct: 240 QA-TATQVLPAGIESSSQTASQ-------ELLIPNDLIGSIIGRQGTKINEIRQVSGAQI 291
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
+I + + ++DR +T+TG+P +I LAQYLI +E ++
Sbjct: 292 KI---GSQLDSTSDRHVTITGSPISINLAQYLITSCLETAKST 331
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 47/265 (17%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +P G++IGKGG+KI EIR+ +GA ++++ + +S +R +T++G+ D
Sbjct: 89 VTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQVA--GDLLPNSTERGVTISGSQD-- 144
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
A+ Q + + +L + G ++ PS AP A L A N
Sbjct: 145 AIIQCVKLICTVILESPPKG-----------ATIPYRPSPAPGAVLLAGN---------- 183
Query: 382 QIL-TKPGALNALTSLSALGGLSDLLGGGSSGGGSG-------------NSGGFGGVPQG 427
Q+ T A + L S+ A GGL DL + G G G + Q
Sbjct: 184 QVFETSEFASHPLFSV-AQGGL-DLQQAYTVQNQYGIPHSELAKLHQLSMQQGLGPIAQA 241
Query: 428 PNY----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTP 481
A I+++ ++ +GSIIG+ G + ++R+ SG++I I ST
Sbjct: 242 TATQVLPAGIESSSQTASQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDSTS 301
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIE 506
+R VT+ GS S+ A LIT +E
Sbjct: 302 DRHVTITGSPISINLAQYLITSCLE 326
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL++ + GSIIGK G +K IRE S A + ++ P ER + I G + V +
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSCP---ERIITITGATECVFR 61
Query: 140 AIYQICL 146
A I +
Sbjct: 62 AFTMITI 68
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 216/366 (59%), Gaps = 41/366 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I +EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIDKLEEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP-------- 609
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 610 -----QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
+ AGG + + + S G + L G A + G + L
Sbjct: 191 GGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHG--AYTIQGQYA------IPQPDL 242
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
L ++ +H P + + N D +Q T+ E+T+PN+LIG +IG+
Sbjct: 243 TKLHQLAMQQSHFPMSHSGNTG--FSGGIDASAQATSH-------ELTIPNDLIGCIIGR 293
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
G KI EIR++SGA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L
Sbjct: 294 QGAKINEIRQMSGAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RL 343
Query: 785 NGEGGG 790
+ E GG
Sbjct: 344 SSEAGG 349
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 212/358 (59%), Gaps = 41/358 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AFS+I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFSMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP-------------QNA 167
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQA 198
Query: 168 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
GG + + + S G + L G A + G + L L +
Sbjct: 199 GGHACETDLWEGRRSHTGGVSLDAVDLHG--AYTIQGQYA------IPQPDLTKLHQLAM 250
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+ +H P + + N D +Q T+ E+T+PN+LIG +IG+ G KI EI
Sbjct: 251 QQSHFPMSHSGNTG--FSGGIDASAQATSH-------ELTIPNDLIGCIIGRQGAKINEI 301
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
R++SGA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 302 RQMSGAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RLSSEAGG 349
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFSMI 75
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 216/366 (59%), Gaps = 41/366 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I +EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIDKLEEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP-------- 609
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 610 -----QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
+ AGG + + + S G + L G A + G + L
Sbjct: 191 GGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHG--AYTIQGQYA------IPQPDL 242
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
L ++ +H P + + N D +Q T+ E+T+PN+LIG +IG+
Sbjct: 243 TKLHQLAMQQSHFPMSHSGNTG--FSGGIDASAQTTSH-------ELTIPNDLIGCIIGR 293
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
G KI EIR++SGA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L
Sbjct: 294 QGAKINEIRQMSGAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RL 343
Query: 785 NGEGGG 790
+ E GG
Sbjct: 344 SSEAGG 349
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 212/358 (59%), Gaps = 41/358 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AFS+I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFSMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP-------------QNA 167
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQA 198
Query: 168 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
GG + + + S G + L G A + G + L L +
Sbjct: 199 GGHACETDLWEGRRSHTGGVSLDAVDLHG--AYTIQGQYA------IPQPDLTKLHQLAM 250
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+ +H P + + N D +Q T+ E+T+PN+LIG +IG+ G KI EI
Sbjct: 251 QQSHFPMSHSGNTG--FSGGIDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEI 301
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
R++SGA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 302 RQMSGAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RLSSEAGG 349
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFSMI 75
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 216/366 (59%), Gaps = 41/366 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I +EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIDKLEEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP-------- 609
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 610 -----QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
+ AGG + + + S G + L G A + G + L
Sbjct: 191 GGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHG--AYTIQGQYA------IPQPDL 242
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
L ++ +H P + + N D +Q T+ E+T+PN+LIG +IG+
Sbjct: 243 TKLHQLAMQQSHFPMSHSGNTG--FSGGIDASAQTTSH-------ELTIPNDLIGCIIGR 293
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
G KI EIR++SGA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L
Sbjct: 294 QGAKINEIRQMSGAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RL 343
Query: 785 NGEGGG 790
+ E GG
Sbjct: 344 SSEAGG 349
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 212/358 (59%), Gaps = 41/358 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AFS+I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFSMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP-------------QNA 167
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQA 198
Query: 168 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
GG + + + S G + L G A + G + L L +
Sbjct: 199 GGHACETDLWEGRRSHTGGVSLDAVDLHG--AYTIQGQYA------IPQPDLTKLHQLAM 250
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+ +H P + + N D +Q T+ E+T+PN+LIG +IG+ G KI EI
Sbjct: 251 QQSHFPMSHSGNTG--FSGGIDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEI 301
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
R++SGA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 302 RQMSGAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RLSSEAGG 349
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFSMI 75
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/349 (42%), Positives = 208/349 (59%), Gaps = 28/349 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
++ +H P N D +Q T+ E+T+PN+LIG +IG+ G KI
Sbjct: 245 LAMQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKI 294
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
EI ++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+S+E
Sbjct: 295 NEIHQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINVSLE 340
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 204/341 (59%), Gaps = 28/341 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 252
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P N D +Q T+ E+T+PN+LIG +IG+ G KI EI ++SG
Sbjct: 253 PMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIHQMSG 302
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
A I+I+ E S DR +T+TG+ +I+LAQYLIN+S+E
Sbjct: 303 AQIKIANPV---EGSTDRQVTITGSAASISLAQYLINVSLE 340
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 216/366 (59%), Gaps = 41/366 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I +EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIDKLEEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP-------- 609
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 610 -----QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
+ AGG + + + S G + L G A + G + L
Sbjct: 191 GGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHG--AYIIQGQY------AIPQPDL 242
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
L ++ +H P + + N D +Q T+ E+T+PN+LIG +IG+
Sbjct: 243 TKLHQLAMQQSHFPMSHSGNTG--FSGGIDASAQTTSH-------ELTIPNDLIGCIIGR 293
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
G KI EIR++SGA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L
Sbjct: 294 QGAKINEIRQMSGAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RL 343
Query: 785 NGEGGG 790
+ E GG
Sbjct: 344 SSEAGG 349
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 212/358 (59%), Gaps = 41/358 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AFS+I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFSMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP-------------QNA 167
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQA 198
Query: 168 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
GG + + + S G + L G A + G + L L +
Sbjct: 199 GGHACETDLWEGRRSHTGGVSLDAVDLHG--AYIIQGQY------AIPQPDLTKLHQLAM 250
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+ +H P + + N D +Q T+ E+T+PN+LIG +IG+ G KI EI
Sbjct: 251 QQSHFPMSHSGNTG--FSGGIDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEI 301
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
R++SGA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 302 RQMSGAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RLSSEAGG 349
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 44/263 (16%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA ++++ + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIAGIPQSI 155
Query: 322 --ALAQYLINM-------------------SVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ Q + M V ++ + GG + D S
Sbjct: 156 IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRR--S 213
Query: 361 SAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGG 420
L+A + A + Q + +P LT L L + SGN+G
Sbjct: 214 HTGGVSLDAVDLHGAYIIQGQYAIPQPD----LTKLHQLA----MQQSHFPMSHSGNTGF 265
Query: 421 FGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--S 478
GG+ A+ QTT + + + + +G IIG+ G + ++R+ SG++I I++
Sbjct: 266 SGGID-----ASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIANPVE 316
Query: 479 STPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 317 GSNDRQVTITGSTASISLAQYLI 339
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFSMI 75
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 211/361 (58%), Gaps = 35/361 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
++ +H P N D +Q T+ E+T+PN+LIG +IG+ G KI
Sbjct: 245 LAMQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKI 294
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 789
EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E G
Sbjct: 295 NEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETG 344
Query: 790 G 790
G
Sbjct: 345 G 345
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 207/353 (58%), Gaps = 35/353 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 252
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SG
Sbjct: 253 PMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSG 302
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
A I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 303 AQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 345
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 211/361 (58%), Gaps = 35/361 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
++ +H P N D +Q T+ E+T+PN+LIG +IG+ G KI
Sbjct: 245 LAMQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKI 294
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 789
EIR++SGA I K++ E S DR +T+TG+ +I+LAQYLIN+ L+ E G
Sbjct: 295 NEIRQMSGAQI---KTANPVEGSTDRQVTITGSAASISLAQYLINV-------RLSSETG 344
Query: 790 G 790
G
Sbjct: 345 G 345
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 207/353 (58%), Gaps = 35/353 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 252
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SG
Sbjct: 253 PMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSG 302
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
A I K++ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 303 AQI---KTANPVEGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 345
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 209/354 (59%), Gaps = 51/354 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I +EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIDKLEEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAMQQSH 220
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P + + N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++S
Sbjct: 221 FPMSHSGNTG--FSGGIDASAQATSH-------ELTIPNDLIGCIIGRQGAKINEIRQMS 271
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
GA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 272 GAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RLSSEAGG 315
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 205/346 (59%), Gaps = 51/346 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AFS+I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFSMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ PD L L ++ +H P + + N
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAMQQSHFPMSHSGN 228
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 229 TG--FSGGIDASAQATSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
E SNDR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 280 PV---EGSNDRQVTITGSTASISLAQYLINV-------RLSSEAGG 315
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFSMI 75
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 206/346 (59%), Gaps = 28/346 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
++ +H P N D +Q T+ E+T+PN+LIG +IG+ G KI
Sbjct: 245 LAMQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKI 294
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 295 NEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 337
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 202/338 (59%), Gaps = 28/338 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 252
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SG
Sbjct: 253 PMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSG 302
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
A I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 303 AQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 337
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 223/398 (56%), Gaps = 55/398 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IM GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTGAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCTGPPN-GGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------S 185
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
+ L+ A N G S G G + A ++ L QL + +P
Sbjct: 186 LSLGTVLLSA----NQ-----------GFSVQGQYGTVTPAEVSKL--QQLSGHPVPFAS 228
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 229 PSVVPGLD------PSAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 276
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E S +R +T+TG+P +IALAQYLI +E ++ G G S D S+
Sbjct: 277 IGN---QAEGSGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG--SGTADLSA-- 329
Query: 802 NLPSSAPLAGLNASNPLAAALPQLAQILTKPAGLNASN 839
P S PLA A L AA P L L P ++ SN
Sbjct: 330 --PFSPPLAPSPALTALPAAPPGL---LGTPYAISLSN 362
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/380 (41%), Positives = 214/380 (56%), Gaps = 52/380 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTGAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCTGPPN-GGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P +
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------SLSLG 189
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
L+ A N G S G G + A ++ L QL + +P
Sbjct: 190 TVLLSA----NQ-----------GFSVQGQYGTVTPAEVSKL--QQLSGHPVPFASPSVV 232
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 233 PGLD------PSAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 279
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E S +R +T+TG+P +IALAQYLI +E ++ G G S D S+ P
Sbjct: 280 --QAEGSGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG--SGTADLSA----PF 331
Query: 361 SAPLAGLNASNPLAAALPQL 380
S PLA A L AA P L
Sbjct: 332 SPPLAPSPALTALPAAPPGL 351
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+I+ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTGAVFH 74
Query: 140 AIYQICLI----MVDSPPKGATIPYRPL 163
A+ I + PP G +I P+
Sbjct: 75 AVSMIAFKLDEDLCTGPPNGGSISKPPV 102
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+I+ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTGAVFH 74
Query: 585 AIYQICLI----MVDSPPKGATIPYRPL 608
A+ I + PP G +I P+
Sbjct: 75 AVSMIAFKLDEDLCTGPPNGGSISKPPV 102
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 215/361 (59%), Gaps = 37/361 (10%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTASSRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMG-NNPLAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + G + AP M N+ L G A + G + L L
Sbjct: 191 GGQDRYSS--GSASYPHTAPSMCLNSDLEGPPQEAYTIQGQY------AIPQPDLTKLHQ 242
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
++ +H P + N D +Q T+ E+T+PN+LIG +IG+ G KI
Sbjct: 243 LAMQQSHFPMSHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKI 292
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 789
EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E G
Sbjct: 293 NEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETG 342
Query: 790 G 790
G
Sbjct: 343 G 343
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 211/353 (59%), Gaps = 37/353 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTASSRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG +
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSS 198
Query: 176 QFGMQNSLMGAPDMG-NNPLAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
G + AP M N+ L G A + G + L L ++ +H
Sbjct: 199 --GSASYPHTAPSMCLNSDLEGPPQEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 250
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P + N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SG
Sbjct: 251 PMSHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSG 300
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
A I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 301 AQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 343
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|328712758|ref|XP_003244898.1| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 244/448 (54%), Gaps = 79/448 (17%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ +EVG++IG GETVK +R +SG+++ IS+ STPERIV + G+ ++ RA LI +
Sbjct: 34 LNSREVGNVIGIRGETVKNIRSQSGARVLISNGSTPERIVIISGNTIAICRATELIGLKV 93
Query: 61 EEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
EEF ++ L GN G + L+LIVPASQCG IIGK GS+I+ IR++S A++ V S+
Sbjct: 94 EEF----SERLNGNWIGPKTPLTLKLIVPASQCGFIIGKNGSKIREIRDSSRAAILVGSN 149
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQF 177
MLPNSTER V+I G ++ +Y +C +++DSPP +I Y P +
Sbjct: 150 MLPNSTERLVSITGTTGTISHCVYLVCNVLLDSPPPNCESIAYHPC-----------KEI 198
Query: 178 GMQNSLMGAPDMG---NNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR 234
+ + D+G N PL LAALG SG GG+N AAL ALA SQL+ +
Sbjct: 199 SVFETCTVIKDLGTEHNIPLTNLAALG----SGTATNGGINPAALTALAGSQLRAS---- 250
Query: 235 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
N+ N NN G N + T ++VP++LIG +IG+ G+KI +IR+ISGA
Sbjct: 251 ------NRLN-NNVSGQQYDKNSNSDIDTTTISVPDDLIGCIIGRRGSKIAKIRQISGAT 303
Query: 295 IRISKS--SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDF 352
+ I +S + E + DR IT+TG +++++A+YLI MSVEL +ANL GE N+
Sbjct: 304 VHIFRSQGTIENREKVDRRITITGNKESVSVAKYLIEMSVELQKANL-----GEVNLSTL 358
Query: 353 SSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSG 412
+ ++ +S+ P +AQ+ K +N ++SL A +
Sbjct: 359 PDNGSITTSST--------------PTVAQLFAKLDPVNIISSLYAYIAI---------- 394
Query: 413 GGSGNSGGFGGVPQGPNYANIQTTGVQR 440
FG P IQTTGV R
Sbjct: 395 --------FGAEKSPP----IQTTGVHR 410
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/417 (37%), Positives = 237/417 (56%), Gaps = 57/417 (13%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR 496
G+ +R ++ +EVG++IG GETVK +R +SG+++ IS+ STPERIV + G+ ++ R
Sbjct: 25 GIDFTIRILLNSREVGNVIGIRGETVKNIRSQSGARVLISNGSTPERIVIISGNTIAICR 84
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
A LI +EEF ++ L GN G + L+LIVPASQCG IIGK GS+I+ IR++S
Sbjct: 85 ATELIGLKVEEF----SERLNGNWIGPKTPLTLKLIVPASQCGFIIGKNGSKIREIRDSS 140
Query: 555 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAG 613
A++ V S+MLPNSTER V+I G ++ +Y +C +++DSPP +I Y P
Sbjct: 141 RAAILVGSNMLPNSTERLVSITGTTGTISHCVYLVCNVLLDSPPPNCESIAYHPC----- 195
Query: 614 GPGLIGNQFGMQNSLMGAPDMG---NNPLAGLAALGLGGNSGGGMGGGLNAAALAALASS 670
+ + + D+G N PL LAALG SG GG+N AAL ALA S
Sbjct: 196 ------KEISVFETCTVIKDLGTEHNIPLTNLAALG----SGTATNGGINPAALTALAGS 245
Query: 671 QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
QL+ + N+ N NN G N + T ++VP++LIG +IG+ G+KI
Sbjct: 246 QLRAS----------NRLN-NNVSGQQYDKNSNSDIDTTTISVPDDLIGCIIGRRGSKIA 294
Query: 731 EIRKISGAMIRISKS--SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEG 788
+IR+ISGA + I +S + E + DR IT+TG +++++A+YLI MSVEL +ANL
Sbjct: 295 KIRQISGATVHIFRSQGTIENREKVDRRITITGNKESVSVAKYLIEMSVELQKANL---- 350
Query: 789 GGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPAGLNASNPLAAAL 845
GE N+ + ++ +S+ P +AQ+ K +N + L A +
Sbjct: 351 -GEVNLSTLPDNGSITTSST--------------PTVAQLFAKLDPVNIISSLYAYI 392
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 65 KNQNKHLGGNGESQL-------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
K +N+HL NG S +R+++ + + G++IG G +K IR SGA V +++
Sbjct: 6 KTENEHLSSNGTSLFNKYDGIDFTIRILLNSREVGNVIGIRGETVKNIRSQSGARVLISN 65
Query: 118 DMLPNSTEREVNIKGVPDAVTQA 140
P ER V I G A+ +A
Sbjct: 66 GSTP---ERIVIISGNTIAICRA 85
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 154/370 (41%), Positives = 204/370 (55%), Gaps = 64/370 (17%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+RE+SG++I IS+ + PERIVT +F+A
Sbjct: 14 VTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEGNCPERIVTXXXXXXXIFKA 73
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA
Sbjct: 74 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 133 VQVAGDMLPNSTERAVTISGAPEAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 190
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL-AALASSQLKTNH 676
GG + A L A+ A+ L H
Sbjct: 191 FS------------------------------------GGQVRADPLGASTANLSLLLQH 214
Query: 677 MPRNQNQNQNQHNRNNRD-GPSQKTNQQQNQIT--------------------KEMTVPN 715
P Q Q+ + D + QQ T E+T+PN
Sbjct: 215 QPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTIPN 274
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
+LIG +IG+ GTKI EIR++SGA I+I+ + E S++R IT+TGTP I+LAQYLIN
Sbjct: 275 DLIGCIIGRQGTKINEIRQMSGAQIKIANAM---EGSSERQITITGTPANISLAQYLINA 331
Query: 776 SVELLRANLN 785
+ A N
Sbjct: 332 RFRDVAAMWN 341
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 200/362 (55%), Gaps = 64/362 (17%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+RE+SG++I IS+ + PERIVT +F+AF++I
Sbjct: 22 MHGKEVGSIIGKKGETVKKMREDSGARINISEGNCPERIVTXXXXXXXIFKAFAMIAYKF 81
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA V VA DML
Sbjct: 82 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDML 140
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 141 PNSTERAVTISGAPEAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFS------ 192
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL-AALASSQLKTNHMPRNQNQN 239
GG + A L A+ A+ L H P
Sbjct: 193 ------------------------------GGQVRADPLGASTANLSLLLQHQPLPAYTI 222
Query: 240 QNQHNRNNRD-GPSQKTNQQQNQIT--------------------KEMTVPNELIGAVIG 278
Q Q+ + D + QQ T E+T+PN+LIG +IG
Sbjct: 223 QGQYAIPHPDLSKLHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIG 282
Query: 279 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
+ GTKI EIR++SGA I+I+ + E S++R IT+TGTP I+LAQYLIN + A
Sbjct: 283 RQGTKINEIRQMSGAQIKIANAM---EGSSERQITITGTPANISLAQYLINARFRDVAAM 339
Query: 339 LN 340
N
Sbjct: 340 WN 341
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 200/337 (59%), Gaps = 42/337 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SP KG T+ P P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKP--ASTPVI 188
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G ++ G + + L L L + + G N A A L +S + H
Sbjct: 189 FAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL-GQTNPAFPAGLDASPPASTH- 244
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
E+T+PN+LIG +IG+ GTKI EIR++SG
Sbjct: 245 --------------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSG 272
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
A I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 273 AQIKIANAT---EGSSERQITITGTPANISLAQYLIN 306
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 196/329 (59%), Gaps = 42/329 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SP KG T+ P P A P + G
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKP--ASTPVIFAG--GQA 194
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
++ G + + L L L + + G N A A L +S + H
Sbjct: 195 YTIQGQYAIPHPDLTKLHQLAMQQTPFPPL-GQTNPAFPAGLDASPPASTH--------- 244
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ +
Sbjct: 245 ------------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA 280
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E S++R IT+TGTP I+LAQYLIN
Sbjct: 281 T---EGSSERQITITGTPANISLAQYLIN 306
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 213/370 (57%), Gaps = 41/370 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 24 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 83
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 84 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 143 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 202
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 203 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 256
Query: 670 SQLKTNHMPRN---------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGA 720
++ +H P ++ + D +Q T+ E+T+PN+LIG
Sbjct: 257 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSH-------ELTIPNDLIGC 309
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELL 780
+IG+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 310 IIGRQGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV----- 361
Query: 781 RANLNGEGGG 790
L+ E GG
Sbjct: 362 --RLSSETGG 369
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 209/362 (57%), Gaps = 41/362 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 32 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 91
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 92 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 150
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 151 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 210
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 211 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 264
Query: 233 PRN---------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTK 283
P ++ + D +Q T+ E+T+PN+LIG +IG+ G K
Sbjct: 265 PMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAK 317
Query: 284 IFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEG 343
I EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E
Sbjct: 318 INEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSET 367
Query: 344 GG 345
GG
Sbjct: 368 GG 369
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 30/260 (11%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 110 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 167
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
+ + + V +L + G GG+ S + P + P
Sbjct: 168 --IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMC 225
Query: 367 LNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG 423
LN PL A Q + +P LT L L + G +G SG
Sbjct: 226 LNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIESS 279
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTP 481
P+ Y + + + +G IIG+ G + ++R+ SG++I I++ +
Sbjct: 280 SPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 339
Query: 482 ERIVTVIGSMDSLFRAFSLI 501
+R VT+ GS S+ A LI
Sbjct: 340 DRQVTITGSAASISLAQYLI 359
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 82
Query: 140 AIYQI 144
A I
Sbjct: 83 AFAMI 87
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 210/361 (58%), Gaps = 35/361 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMSLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
++ +H P N D +Q T+ E+T+PN+LIG +I + G KI
Sbjct: 245 LAMQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIRRQGAKI 294
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 789
EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E G
Sbjct: 295 NEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETG 344
Query: 790 G 790
G
Sbjct: 345 G 345
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 206/353 (58%), Gaps = 35/353 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMSLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 252
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P N D +Q T+ E+T+PN+LIG +I + G KI EIR++SG
Sbjct: 253 PMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIRRQGAKINEIRQMSG 302
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
A I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 303 AQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 345
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 212/364 (58%), Gaps = 28/364 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
++ +H P N + + + G + + E+T+PN+LIG +IG+ G
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 304
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNG 786
KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+
Sbjct: 305 AKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSS 354
Query: 787 EGGG 790
E GG
Sbjct: 355 ETGG 358
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 208/356 (58%), Gaps = 28/356 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 252
Query: 233 PR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 253 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 312
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 313 MSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 358
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 39/265 (14%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
+ + + V +L + G GG+ S + P + P
Sbjct: 156 --IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMC 213
Query: 367 LNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG 423
LN PL A Q + +P LT L L + G +G SG
Sbjct: 214 LNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIESS 267
Query: 424 VPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD- 477
P+ Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I I++
Sbjct: 268 SPEVKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIANP 323
Query: 478 -SSTPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 324 VEGSTDRQVTITGSAASISLAQYLI 348
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 207/349 (59%), Gaps = 21/349 (6%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
++ +H P N + + + G + + E+T+PN+LIG +IG+ G
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 304
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 305 AKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 350
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 203/341 (59%), Gaps = 21/341 (6%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 252
Query: 233 PR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 253 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 312
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
+SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 313 MSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 350
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 39/265 (14%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
+ + + V +L + G GG+ S + P + P
Sbjct: 156 --IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMC 213
Query: 367 LNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG 423
LN PL A Q + +P LT L L + G +G SG
Sbjct: 214 LNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIESS 267
Query: 424 VPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD- 477
P+ Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I I++
Sbjct: 268 SPEVKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIANP 323
Query: 478 -SSTPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 324 VEGSTDRQVTITGSAASISLAQYLI 348
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 213/370 (57%), Gaps = 41/370 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPRN---------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGA 720
++ +H P ++ + D +Q T+ E+T+PN+LIG
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSH-------ELTIPNDLIGC 297
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELL 780
+IG+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 298 IIGRQGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV----- 349
Query: 781 RANLNGEGGG 790
L+ E GG
Sbjct: 350 --RLSSETGG 357
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 209/362 (57%), Gaps = 41/362 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 252
Query: 233 PRN---------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTK 283
P ++ + D +Q T+ E+T+PN+LIG +IG+ G K
Sbjct: 253 PMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAK 305
Query: 284 IFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEG 343
I EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E
Sbjct: 306 INEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSET 355
Query: 344 GG 345
GG
Sbjct: 356 GG 357
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 30/260 (11%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
+ + + V +L + G GG+ S + P + P
Sbjct: 156 --IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMC 213
Query: 367 LNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG 423
LN PL A Q + +P LT L L + G +G SG
Sbjct: 214 LNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIESS 267
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTP 481
P+ Y + + + +G IIG+ G + ++R+ SG++I I++ +
Sbjct: 268 SPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 327
Query: 482 ERIVTVIGSMDSLFRAFSLI 501
+R VT+ GS S+ A LI
Sbjct: 328 DRQVTITGSAASISLAQYLI 347
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 212/364 (58%), Gaps = 28/364 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
++ +H P N + + + G + + E+T+PN+LIG +IG+ G
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 304
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNG 786
KI EIR++SGA I K++ E S DR +T+TG+ +I+LAQYLIN+ L+
Sbjct: 305 AKINEIRQMSGAQI---KTANPVEGSTDRQVTITGSAASISLAQYLINV-------RLSS 354
Query: 787 EGGG 790
E GG
Sbjct: 355 ETGG 358
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 208/356 (58%), Gaps = 28/356 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 252
Query: 233 PR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 253 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 312
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+SGA I K++ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 313 MSGAQI---KTANPVEGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 358
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
+ + + V +L + G GG+ S + P + P
Sbjct: 156 --IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMC 213
Query: 367 LNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG 423
LN PL A Q + +P LT L L + G +G SG
Sbjct: 214 LNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIESS 267
Query: 424 VPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD- 477
P+ Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I ++
Sbjct: 268 SPEVKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKTANP 323
Query: 478 -SSTPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 324 VEGSTDRQVTITGSAASISLAQYLI 348
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 216/364 (59%), Gaps = 30/364 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTASSRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMG-NNPLAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + G + AP M N+ L G A + G + L L
Sbjct: 191 GGQDRYSS--GSASYPHTAPSMCLNSDLEGPPQEAYTIQGQY------AIPQPDLTKLHQ 242
Query: 670 SQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
++ +H P N + + + + G + + E+T+PN+LIG +IG+ G
Sbjct: 243 LAMQQSHFPMSHGNTGFSGVESSSPDEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 302
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNG 786
KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+
Sbjct: 303 AKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSS 352
Query: 787 EGGG 790
E GG
Sbjct: 353 ETGG 356
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 212/356 (59%), Gaps = 30/356 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTASSRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG +
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSS 198
Query: 176 QFGMQNSLMGAPDMG-NNPLAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
G + AP M N+ L G A + G + L L ++ +H
Sbjct: 199 --GSASYPHTAPSMCLNSDLEGPPQEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 250
Query: 233 PR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
P N + + + + G + + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 251 PMSHGNTGFSGVESSSPDEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 310
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 311 MSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 356
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 43/266 (16%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDN-NLPSSAPLA 365
+ + + V +L + G GG+ D +SS + + P +AP
Sbjct: 156 --IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQ---DRYSSGSASYPHTAPSM 210
Query: 366 GLNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFG 422
LN+ P A Q + +P LT L L S G +G SG
Sbjct: 211 CLNSDLEGPPQEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMSHGNTGFSGVES 264
Query: 423 GVPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
P Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I I++
Sbjct: 265 SSPDEKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIAN 320
Query: 478 --SSTPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 321 PVEGSTDRQVTITGSAASISLAQYLI 346
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 201/340 (59%), Gaps = 50/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I + +EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIEKLEEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD+ L LA Q
Sbjct: 189 FAGGQAYAVQGQHAIPQPDL---------------------------TKLHQLAMQQSPF 221
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P NQ D +Q ++ EMT+PN+LIG +IG+ G KI EIR+
Sbjct: 222 PIAPSNQ-------GFTGMDASAQTSSH-------EMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ + S DR +T+TG+P +I+LA+YLIN
Sbjct: 268 MSGAQIKIANPV---DGSTDRQVTITGSPASISLAEYLIN 304
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 197/332 (59%), Gaps = 50/332 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+AFS+I + +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD+ L LA Q P NQ
Sbjct: 197 VQGQHAIPQPDL---------------------------TKLHQLAMQQSPFPIAPSNQ- 228
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
D +Q ++ EMT+PN+LIG +IG+ G KI EIR++SGA I+I
Sbjct: 229 ------GFTGMDASAQTSSH-------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ + S DR +T+TG+P +I+LA+YLIN
Sbjct: 276 ANPV---DGSTDRQVTITGSPASISLAEYLIN 304
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 202/341 (59%), Gaps = 45/341 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G S+F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I + +EE + + + +RL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIEKLEEDISTSMTNSTATSKPP-VTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + + G P ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITVAGTPQSIIECVKQICIVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNP-LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
G + +Q + PD+ P L L L A+ S
Sbjct: 189 FAGGQAYAVQGQHAIPQPDVSEGPSLTKLHQL--------------------AMQQSPFP 228
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
H NQ + D +Q + E+T+PN+LIG +IG+ G KI EIR
Sbjct: 229 IAH--------SNQGFQAGMDASAQTGSH-------ELTIPNDLIGCIIGRQGAKINEIR 273
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ E S DR +T+TG+ +I+LA+YLIN
Sbjct: 274 QMSGAQIKIANPV---EGSTDRQVTITGSHASISLAEYLIN 311
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 198/333 (59%), Gaps = 45/333 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G S+F+AFS+I + +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKAFSMIIEKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + +RL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISTSMTNSTATSKPP-VTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + + G P ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITVAGTPQSIIECVKQICIVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGNNP-LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+Q + PD+ P L L L A+ S H
Sbjct: 197 VQGQHAIPQPDVSEGPSLTKLHQL--------------------AMQQSPFPIAH----- 231
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
NQ + D +Q + E+T+PN+LIG +IG+ G KI EIR++SGA I+
Sbjct: 232 ---SNQGFQAGMDASAQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 281
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ E S DR +T+TG+ +I+LA+YLIN
Sbjct: 282 IANPV---EGSTDRQVTITGSHASISLAEYLIN 311
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 207/358 (57%), Gaps = 61/358 (17%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
GG +Q MQ S GN +G+ + G GL+A+A
Sbjct: 191 GGQLTKLHQLAMQQSHFPMTH-GNTGFSGIES---SSPEVKGYWAGLDASAQT------- 239
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
T+H E+T+PN+LIG +IG+ G KI EI
Sbjct: 240 -TSH---------------------------------ELTIPNDLIGCIIGRQGAKINEI 265
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
R++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 266 RQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 313
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 203/350 (58%), Gaps = 61/350 (17%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG +
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLH 198
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
Q MQ S GN +G+ + G GL+A+A T+H
Sbjct: 199 QLAMQQSHFPMTH-GNTGFSGIES---SSPEVKGYWAGLDASAQT--------TSH---- 242
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
E+T+PN+LIG +IG+ G KI EIR++SGA I
Sbjct: 243 -----------------------------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 273
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 274 KIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 313
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 212/364 (58%), Gaps = 28/364 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + L+ LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTN-STAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + IC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKHICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
++ +H P N + + + G + + E+T+PN+LIG +IG G
Sbjct: 245 LAVQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGCQG 304
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNG 786
KI EI ++SGA+I+I+ + E S DR +T+TG+ +I+LAQYLIN+ L+
Sbjct: 305 AKINEICQMSGALIKIANTV---EGSTDRQVTITGSAASISLAQYLINV-------RLSS 354
Query: 787 EGGG 790
E GG
Sbjct: 355 ETGG 358
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 208/356 (58%), Gaps = 28/356 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + L+ LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTN-STAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + IC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKHICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAVQQSHF 252
Query: 233 PR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
P N + + + G + + E+T+PN+LIG +IG G KI EI +
Sbjct: 253 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGCQGAKINEICQ 312
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+SGA+I+I+ + E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 313 MSGALIKIANTV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 358
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
+ + ++ V +L + G GG+ S + P + P
Sbjct: 156 --IECVKHICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMC 213
Query: 367 LNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG 423
LN PL A Q + +P LT L L + G +G SG
Sbjct: 214 LNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAVQQSHF--PMTHGNTGFSGIESS 267
Query: 424 VPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS 478
P+ Y A+ QTT + + + + +G IIG G + ++ + SG+ I I+++
Sbjct: 268 SPEVKGYWAGLDASAQTTSHELTIPNDL----IGCIIGCQGAKINEICQMSGALIKIANT 323
Query: 479 S--TPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 324 VEGSTDRQVTITGSAASISLAQYLI 348
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/380 (40%), Positives = 211/380 (55%), Gaps = 52/380 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +MQGKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A
Sbjct: 53 VTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHA 112
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
S+I ++E + + GG + LRL++PASQCGS+IGK G++IK IRET+GA
Sbjct: 113 VSMIAFKLDEDLCSAPAN-GGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 171
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 172 VQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP---------- 221
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
SL L + L N G + G A A + Q + H
Sbjct: 222 ---------SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 260
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
+ + D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SG
Sbjct: 261 VPFASPSMV----PGLDPGAQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSG 309
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDF 797
A I+I + E + +R +T+TG+P +IALAQYLI +E ++ G G
Sbjct: 310 AHIKIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------ 360
Query: 798 SSDNNLPSSAPLAGLNASNP 817
+D + P S PL L + P
Sbjct: 361 PTDLSAPFSPPLTALPTAPP 380
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 207/372 (55%), Gaps = 52/372 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 61 MQGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 120
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + + GG + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 121 DEDLCSAPAN-GGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 179
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 180 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 221
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
SL L + L N G + G A A + Q + H + +
Sbjct: 222 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 268
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 269 V----PGLDPGAQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 316
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D + P
Sbjct: 317 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDLSAPF 368
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 369 SPPLTALPTAPP 380
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 102/254 (40%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 141 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 200
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 201 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 260
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 261 VPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 319
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P + P+ P P A
Sbjct: 320 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLSAPFSP-PLTALPTA 378
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 379 PPGLLGAPYAISLS 392
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 98/246 (39%), Gaps = 70/246 (28%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I I
Sbjct: 149 QCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVIL 208
Query: 62 E---------FHKN---------QNKHLGGNGE---------SQLIQL------------ 82
E +H + N+ G+ ++L QL
Sbjct: 209 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 268
Query: 83 -------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+VP G +IG+ GS+I IR+ SGA + + + + ER V
Sbjct: 269 VPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVT 327
Query: 130 IKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGLIGNQ 176
I G P ++ A Y I CL S P + P+ P P A PGL+G
Sbjct: 328 ITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLSAPFSP-PLTALPTAPPGLLGAP 386
Query: 177 FGMQNS 182
+ + S
Sbjct: 387 YAISLS 392
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + LR+++ + GSIIGK G +K IRE S A + ++ P ER I G A
Sbjct: 52 SVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAA 108
Query: 137 VTQAIYQICLI----MVDSPPKGATIPYRPL 163
V A+ I + +P G T+ P+
Sbjct: 109 VFHAVSMIAFKLDEDLCSAPANGGTVSRPPV 139
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + LR+++ + GSIIGK G +K IRE S A + ++ P ER I G A
Sbjct: 52 SVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAA 108
Query: 582 VTQAIYQICLI----MVDSPPKGATIPYRPL 608
V A+ I + +P G T+ P+
Sbjct: 109 VFHAVSMIAFKLDEDLCSAPANGGTVSRPPV 139
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 207/358 (57%), Gaps = 57/358 (15%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I + +EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIEKLEEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD+ L LA Q
Sbjct: 189 FAGGQAYAVQGQHAIPQPDL---------------------------TKLHQLAMQQSPF 221
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P NQ D +Q ++ EMT+PN+LIG +IG+ G KI EIR+
Sbjct: 222 PIAPSNQ-------GFTGIDASAQTSSH-------EMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 792
+SGA I+I+ + S DR +T+TG+P +I+LA+YLIN A L+ E G S
Sbjct: 268 MSGAQIKIANPV---DGSTDRQVTITGSPASISLAEYLIN-------ARLSSEATGLS 315
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/350 (41%), Positives = 203/350 (58%), Gaps = 57/350 (16%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+AFS+I + +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD+ L LA Q P NQ
Sbjct: 197 VQGQHAIPQPDL---------------------------TKLHQLAMQQSPFPIAPSNQ- 228
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
D +Q ++ EMT+PN+LIG +IG+ G KI EIR++SGA I+I
Sbjct: 229 ------GFTGIDASAQTSSH-------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 347
+ + S DR +T+TG+P +I+LA+YLIN A L+ E G S
Sbjct: 276 ANPV---DGSTDRQVTITGSPASISLAEYLIN-------ARLSSEATGLS 315
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 201/340 (59%), Gaps = 50/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I + +EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIEKLEEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD+ L LA Q
Sbjct: 189 FAGGQAYAVQGQHAIPQPDL---------------------------TKLHQLAMQQSPF 221
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P NQ D +Q ++ EMT+PN+LIG +IG+ G KI EIR+
Sbjct: 222 PIAPSNQ-------GFTGIDASAQTSSH-------EMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ + S DR +T+TG+P +I+LA+YLIN
Sbjct: 268 MSGAQIKIANPV---DGSTDRQVTITGSPASISLAEYLIN 304
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 197/332 (59%), Gaps = 50/332 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+AFS+I + +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD+ L LA Q P NQ
Sbjct: 197 VQGQHAIPQPDL---------------------------TKLHQLAMQQSPFPIAPSNQ- 228
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
D +Q ++ EMT+PN+LIG +IG+ G KI EIR++SGA I+I
Sbjct: 229 ------GFTGIDASAQTSSH-------EMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ + S DR +T+TG+P +I+LA+YLIN
Sbjct: 276 ANPV---DGSTDRQVTITGSPASISLAEYLIN 304
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/377 (40%), Positives = 210/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A A + Q + H +P
Sbjct: 185 -----SL------------SLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSVVPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PAD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPTPFSPPLTALPTAPP 343
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/373 (40%), Positives = 207/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A A + Q + H +P
Sbjct: 185 -SL------------SLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQLSGHAVPFASPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPTP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 585 AIYQICL 591
A+ I
Sbjct: 75 AVSMIAF 81
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 218/401 (54%), Gaps = 60/401 (14%)
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
SG GG+ + P + + +R +M GKEVGSIIGK GETVK++RE+S ++I IS+
Sbjct: 2 SGSDGGLEEEPELS------ITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
S PERI T+ GS ++F A S+I ++E + GGN + LRL++PASQCG
Sbjct: 56 GSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCG 114
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+ + QIC ++++SP
Sbjct: 115 SLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESP 174
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
PKGATIPY P SL L + L N G + G
Sbjct: 175 PKGATIPYHP-------------------SL------------SLGTVLLSANQGFSVQG 203
Query: 658 GLNAAALAALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
A A + QL ++ +P + P +T+ Q E VPN+
Sbjct: 204 QYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD------PGTQTSSQ------EFLVPND 251
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALAQYLI
Sbjct: 252 LIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALAQYLITAC 308
Query: 777 VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+E ++ G G +D P S PL L + P
Sbjct: 309 LETAKSTSGGTPGSA------PADLPAPFSPPLTALPTAPP 343
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 206/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS-SQLKTNHMPRNQNQN 239
SL L + L N G + G A A + QL ++ +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPAP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 TPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 220/401 (54%), Gaps = 60/401 (14%)
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
SG GG+ + P + + +R +M GKEVGSIIGK GETVK++RE+S ++I IS+
Sbjct: 2 SGSDGGLEEEPELS------ITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
S PERI T+ GS ++F A S+I ++E + GGN + LRL++PASQCG
Sbjct: 56 GSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCG 114
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+ + QIC ++++SP
Sbjct: 115 SLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESP 174
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
PKGATIPY P SL L + L N G + G
Sbjct: 175 PKGATIPYHP-------------------SL------------SLGTVLLSANQGFSVQG 203
Query: 658 GLNAAALAALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
A A + QL ++ +P + P +T+ Q E VPN+
Sbjct: 204 QYGAVTPAEVTKLQQLSSHAVPFATPSMVPGLD------PGTQTSSQ------EFLVPND 251
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALAQYLI
Sbjct: 252 LIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALAQYLITAC 308
Query: 777 VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+E ++ GG S+ +D P S PL L + P
Sbjct: 309 LETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 343
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 152/373 (40%), Positives = 208/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS-SQLKTNHMPRNQNQN 239
SL L + L N G + G A A + QL ++ +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSM 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---ADLPAP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFATPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 70/246 (28%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I I
Sbjct: 112 QCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVIL 171
Query: 62 E---------FHKN---------QNKHLGGNGE---------SQLIQL------------ 82
E +H + N+ G+ ++L QL
Sbjct: 172 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSM 231
Query: 83 -------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+VP G +IG+ GS+I IR+ SGA + + + + ER V
Sbjct: 232 VPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVT 290
Query: 130 IKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---GGPGLIGNQ 176
I G P ++ A Y I CL S P P+ P P A PGL+G
Sbjct: 291 ITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTAPPGLLGTP 349
Query: 177 FGMQNS 182
+ + S
Sbjct: 350 YAISLS 355
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 220/401 (54%), Gaps = 60/401 (14%)
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
SG GG+ + P + + +R +M GKEVGSIIGK GETVK++RE+S ++I IS+
Sbjct: 2 SGSDGGLEEEPELS------ITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
S PERI T+ GS ++F A S+I ++E + GGN + LRL++PASQCG
Sbjct: 56 GSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCG 114
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+ + QIC ++++SP
Sbjct: 115 SLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESP 174
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
PKGATIPY P SL L + L N G + G
Sbjct: 175 PKGATIPYHP-------------------SL------------SLGTVLLSANQGFSVQG 203
Query: 658 GLNAAALAALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
A A + QL ++ +P + P +T+ Q E VPN+
Sbjct: 204 QYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD------PGTQTSSQ------EFLVPND 251
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALAQYLI
Sbjct: 252 LIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALAQYLITAC 308
Query: 777 VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+E ++ GG S+ +D P S PL L + P
Sbjct: 309 LETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 343
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 152/373 (40%), Positives = 208/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS-SQLKTNHMPRNQNQN 239
SL L + L N G + G A A + QL ++ +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---ADLPAP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 TPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 220/401 (54%), Gaps = 60/401 (14%)
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
SG GG+ + P + + +R +M GKEVGSIIGK GETVK++RE+S ++I IS+
Sbjct: 2 SGSDGGLEEEPELS------ITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
S PERI T+ GS ++F A S+I ++E + GGN + LRL++PASQCG
Sbjct: 56 GSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCG 114
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+ + QIC ++++SP
Sbjct: 115 SLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESP 174
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
PKGATIPY P SL L + L N G + G
Sbjct: 175 PKGATIPYHP-------------------SL------------SLGTVLLSANQGFSVQG 203
Query: 658 GLNAAALAALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
A A + QL ++ +P + P +T+ Q E VPN+
Sbjct: 204 QYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD------PGTQTSSQ------EFLVPND 251
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALAQYLI
Sbjct: 252 LIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALAQYLITAC 308
Query: 777 VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+E ++ GG S+ +D P S PL L + P
Sbjct: 309 LETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 343
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 152/373 (40%), Positives = 208/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS-SQLKTNHMPRNQNQN 239
SL L + L N G + G A A + QL ++ +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---ADLPAP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 TPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 209/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 60 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 119
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 120 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 178
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 179 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 224
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 225 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 267
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 268 SPSVVPGLD------PSAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 315
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 316 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PAD 366
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 367 LPAPFSPPLTALPTAPP 383
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 206/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 64 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 123
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 124 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 182
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 183 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 224
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 225 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 271
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 272 VPGLD------PSAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 319
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 320 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPAP 370
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 371 FSPPLTALPTAPP 383
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 144 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 203
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 204 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 263
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 264 VPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 322
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 323 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTA 381
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 382 PPGLLGTPYAISLS 395
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 148 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 207
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 208 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 267
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 268 SPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 326
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 327 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTAPPGL 385
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 386 LGTPYAISLS 395
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 58 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 114
Query: 140 AIYQICL 146
A+ I
Sbjct: 115 AVSMIAF 121
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 58 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 114
Query: 585 AIYQICL 591
A+ I
Sbjct: 115 AVSMIAF 121
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/365 (41%), Positives = 211/365 (57%), Gaps = 39/365 (10%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-- 611
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 612 ---AGGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALA 665
AGG + P M NP L G L A + G + L
Sbjct: 191 VIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLT 244
Query: 666 ALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKG 725
L ++ +H P N D +Q T+ E+T+PN+LIG +IG+
Sbjct: 245 KLHQLAMQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQ 294
Query: 726 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 785
G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+
Sbjct: 295 GAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLS 344
Query: 786 GEGGG 790
E GG
Sbjct: 345 SETGG 349
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 207/357 (57%), Gaps = 39/357 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-----AGGPG 171
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQD 198
Query: 172 LIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
+ P M NP L G L A + G + L L ++
Sbjct: 199 RYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQ 252
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
+H P N D +Q T+ E+T+PN+LIG +IG+ G KI EIR
Sbjct: 253 QSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIR 302
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 303 QMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 349
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 149/342 (43%), Positives = 201/342 (58%), Gaps = 30/342 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKL--REESGSKIYISDSSTPERIVTVIGSMDSLF 495
V +R +M GKEVGSIIGK + K L +SG++I IS+ + PERIVT+ G D++F
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEGNCPERIVTITGPTDAIF 71
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
+AF++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++G
Sbjct: 72 KAFAMIAYKFEEDITNSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTG 130
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP 615
A V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P
Sbjct: 131 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTP 188
Query: 616 GLI--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
+ G + +Q + PD L L L + +G
Sbjct: 189 VIFAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQ--------------- 229
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
T P + + N G S + T E+T+PN+LIG +IG+ GTKI EI
Sbjct: 230 TTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 289
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
R++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 290 RQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 328
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 197/334 (58%), Gaps = 30/334 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKL--REESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITK 58
M GKEVGSIIGK + K L +SG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEGNCPERIVTITGPTDAIFKAFAMIAY 79
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA D
Sbjct: 80 KFEEDITNSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD 138
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQ 176
MLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G
Sbjct: 139 MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQA 196
Query: 177 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+ +Q + PD L L L + +G T P
Sbjct: 197 YTIQGQYAIPHPDQ----LTKLHQLAMQQTPFTPLGQ---------------TTPAFPGE 237
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+ + N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I
Sbjct: 238 KLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQI 297
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 298 KIANAT---EGSSERQITITGTPANISLAQYLIN 328
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 204/354 (57%), Gaps = 52/354 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAMQQSH 220
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++S
Sbjct: 221 FPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMS 270
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
GA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 271 GAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 314
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 200/346 (57%), Gaps = 52/346 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ PD L L ++ +H P
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAMQQSHFPMTHG-- 226
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 227 -NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 278
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 279 PV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 314
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 201/337 (59%), Gaps = 29/337 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SP KG T+ P P A P +
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKP--ASTPVI 188
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G ++ G + + L L L + +G A A +++
Sbjct: 189 FAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVPFVRSPWA 246
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
+ + + H E+T+PN+LIG +IG+ GTKI EIR++SG
Sbjct: 247 CLDASPPASTH---------------------ELTIPNDLIGCIIGRQGTKINEIRQMSG 285
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
A I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 286 AQIKIANAT---EGSSERQITITGTPANISLAQYLIN 319
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 197/329 (59%), Gaps = 29/329 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SP KG T+ P P A P + G
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKP--ASTPVIFAG--GQA 194
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
++ G + + L L L + +G A A +++ + +
Sbjct: 195 YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVPFVRSPWACLDASPPA 254
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ H E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ +
Sbjct: 255 STH---------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA 293
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E S++R IT+TGTP I+LAQYLIN
Sbjct: 294 T---EGSSERQITITGTPANISLAQYLIN 319
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 207/357 (57%), Gaps = 45/357 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTASSRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAMQQSH 220
Query: 677 MPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
P N + + + + G + + E+T+PN+LIG +IG+ G KI EIR
Sbjct: 221 FPMSHGNTGFSGVESSSPDEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 280
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 281 QMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 327
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 203/349 (58%), Gaps = 45/349 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTASSRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR---NQ 236
+ PD L L ++ +H P N
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAMQQSHFPMSHGNT 228
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ + + + G + + E+T+PN+LIG +IG+ G KI EIR++SGA I+
Sbjct: 229 GFSGVESSSPDEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 288
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 289 IANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 327
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 209/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSVVPGMD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PAD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPTPFSPPLTALPTAPP 343
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 206/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGMD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPTP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|345311367|ref|XP_001520914.2| PREDICTED: poly(rC)-binding protein 4-like [Ornithorhynchus
anatinus]
Length = 447
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 225/400 (56%), Gaps = 20/400 (5%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 19 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTGAVFHAVSMI 78
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRE++GA V VA
Sbjct: 79 AFKLDEDLCTGPPN-GGSVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRESTGAQVQVA 137
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P + G L NQ
Sbjct: 138 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPS-LSLGTVLLSTNQ 196
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
+ N + + G+N G G G G G A +AA++ L P+
Sbjct: 197 --VANIAIQKQERGSNRQYHQVEHG-SGQPGKLRGNGQEAVEVAAVSMGPLPPPE-PKVS 252
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQIT--KEMTVPNELIGAVIGKGGTKIFEIRKISGAM 739
Q PS T +E VPN+LIG VIG+ G+KI EIR++SGA
Sbjct: 253 KLQQLSGPPVPFTSPSVVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 312
Query: 740 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSS 799
I+I + E S +R +T+TG+P +IALAQYLI +E ++ G G S
Sbjct: 313 IKIGN---QTEGSGERHVTITGSPVSIALAQYLITACLETAKSTSAGTPG------SGPS 363
Query: 800 DNNLPSSAPLAGLNASNPLAAALPQLAQILTKPAGLNASN 839
D P S PLA A L A P L L P ++ SN
Sbjct: 364 DLPAPFSPPLAPSPALTALPTAPPGL---LGTPYAISLSN 400
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 216/382 (56%), Gaps = 17/382 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 23 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTGAVFHAVSMIAFKL 82
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRE++GA V VA D+L
Sbjct: 83 DEDLCTGPPN-GGSVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRESTGAQVQVAGDLL 141
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P + G L NQ +
Sbjct: 142 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPS-LSLGTVLLSTNQ--VA 198
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
N + + G+N G G G G G A +AA++ L P+ Q
Sbjct: 199 NIAIQKQERGSNRQYHQVEHG-SGQPGKLRGNGQEAVEVAAVSMGPLPPPE-PKVSKLQQ 256
Query: 241 NQHNRNNRDGPSQKTNQQQNQIT--KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
PS T +E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 257 LSGPPVPFTSPSVVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG 316
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNL 358
+ E S +R +T+TG+P +IALAQYLI +E ++ G G SD
Sbjct: 317 N---QTEGSGERHVTITGSPVSIALAQYLITACLETAKSTSAGTPG------SGPSDLPA 367
Query: 359 PSSAPLAGLNASNPLAAALPQL 380
P S PLA A L A P L
Sbjct: 368 PFSPPLAPSPALTALPTAPPGL 389
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 17 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTGAVFH 73
Query: 140 AIYQICLI----MVDSPPKGATIPYRPL 163
A+ I + PP G ++ P+
Sbjct: 74 AVSMIAFKLDEDLCTGPPNGGSVSKPPV 101
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 17 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTGAVFH 73
Query: 585 AIYQICLI----MVDSPPKGATIPYRPL 608
A+ I + PP G ++ P+
Sbjct: 74 AVSMIAFKLDEDLCTGPPNGGSVSKPPV 101
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 205/340 (60%), Gaps = 40/340 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I + +EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIEKLEEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD + + + L L ++
Sbjct: 189 FAGGQAYAVQGQHAIPQPDSSSASI---------------------SPQLTKLHQLAMQQ 227
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ P N N + D +Q ++ EMT+PN+LIG +IG+ G+KI EIR+
Sbjct: 228 SPFPMGPN---NPGFQGGMDASAQTSSH-------EMTIPNDLIGCIIGRQGSKINEIRQ 277
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ E S DR +T+TG+ +I+LA+YLIN
Sbjct: 278 MSGAQIKIANPV---EGSADRQVTITGSAASISLAEYLIN 314
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 201/332 (60%), Gaps = 40/332 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+AFS+I + +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD + + + L L ++ + P N
Sbjct: 197 VQGQHAIPQPDSSSASI---------------------SPQLTKLHQLAMQQSPFPMGPN 235
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
N + D +Q ++ EMT+PN+LIG +IG+ G+KI EIR++SGA I+I
Sbjct: 236 ---NPGFQGGMDASAQTSSH-------EMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 285
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E S DR +T+TG+ +I+LA+YLIN
Sbjct: 286 ANPV---EGSADRQVTITGSAASISLAEYLIN 314
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/352 (41%), Positives = 209/352 (59%), Gaps = 22/352 (6%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++S PKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLES-PKGVTIPYRPKPSSSPVIFA 189
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 190 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 243
Query: 670 SQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
++ +H P N + + + G + + E+T+PN+LIG +IG+ G
Sbjct: 244 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 303
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+S+E
Sbjct: 304 AKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINVSLE 352
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 205/344 (59%), Gaps = 22/344 (6%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++S PKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLES-PKGVTIPYRPKPSSSPVIFAGGQDRYST 197
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 198 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 251
Query: 233 PR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 252 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 311
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+S+E
Sbjct: 312 MSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINVSLE 352
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 34/267 (12%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA ++++ + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIAGIPQSI 155
Query: 322 --ALAQYLINM-----SVEL-LRANLNGE----GGGESNMDDFSSDNNLPSSAPLAGLNA 369
+ Q + M V + R + GG+ S + P + P LN
Sbjct: 156 IECVKQICVVMLESPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNP 215
Query: 370 S---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQ 426
PL A Q + +P LT L L + G +G SG P+
Sbjct: 216 DLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHFP--MTHGNTGFSGIESSSPE 269
Query: 427 GPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SS 479
Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I I++
Sbjct: 270 VKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIANPVEG 325
Query: 480 TPERIVTVIGSMDSLFRAFSLITKNIE 506
+ +R VT+ GS S+ A LI ++E
Sbjct: 326 STDRQVTITGSAASISLAQYLINVSLE 352
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 201/340 (59%), Gaps = 49/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G S+F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I + +EE N + + + +RL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIEKLEEDISNSMTNSTATSKPP-VTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + + G P ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITVAGTPQSIIECVKQICIVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L A+ S
Sbjct: 189 FAGGQAYAVQGQHAIPQPD-----LTKLHQL--------------------AMQQSPFPI 223
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H NQ + D +Q + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 224 AH--------SNQGFQAGMDASAQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQ 268
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ E S DR +T+TG+ +I+LA+YLIN
Sbjct: 269 MSGAQIKIANPV---EGSTDRQVTITGSHASISLAEYLIN 305
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 197/332 (59%), Gaps = 49/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G S+F+AFS+I + +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKAFSMIIEKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + +RL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISNSMTNSTATSKPP-VTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + + G P ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITVAGTPQSIIECVKQICIVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L A+ S H
Sbjct: 197 VQGQHAIPQPD-----LTKLHQL--------------------AMQQSPFPIAH------ 225
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
NQ + D +Q + E+T+PN+LIG +IG+ G KI EIR++SGA I+I
Sbjct: 226 --SNQGFQAGMDASAQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E S DR +T+TG+ +I+LA+YLIN
Sbjct: 277 ANPV---EGSTDRQVTITGSHASISLAEYLIN 305
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 209/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSVVPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PAD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPTPFSPPLTALPTAPP 343
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 206/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPTP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 585 AIYQICL 591
A+ I
Sbjct: 75 AVSMIAF 81
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 200/339 (58%), Gaps = 45/339 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAMQQSH 220
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P + N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++S
Sbjct: 221 FPMSHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMS 270
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
GA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 271 GAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 306
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/331 (41%), Positives = 196/331 (59%), Gaps = 45/331 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ PD L L ++ +H P +
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAMQQSHFPMSHG-- 226
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 227 -NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 278
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 279 PV---EGSTDRQVTITGSAASISLAQYLINV 306
Score = 39.7 bits (91), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 208/376 (55%), Gaps = 52/376 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCSATAN-GGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
SL L + L N G + G A A + Q + H
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 228 SPGMVP----GLDPGAQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 276
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 277 IGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADL 327
Query: 802 NLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 328 PAPFSPPLTALPTAPP 343
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCSATAN-GGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
SL L + L N G + G A A + Q + H +
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPGM 231
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VP----GLDPGAQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 279
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPAPF 331
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 332 SPPLTALPTAPP 343
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPGMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 70/246 (28%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I I
Sbjct: 112 QCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVIL 171
Query: 62 E---------FHKN---------QNKHLGGNGE---------SQLIQL------------ 82
E +H + N+ G+ ++L QL
Sbjct: 172 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPGM 231
Query: 83 -------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+VP G +IG+ GS+I IR+ SGA + + + + ER V
Sbjct: 232 VPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVT 290
Query: 130 IKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGLIGNQ 176
I G P ++ A Y I CL S P P+ P P A PGL+G
Sbjct: 291 ITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTAPPGLLGTP 349
Query: 177 FGMQNS 182
+ + S
Sbjct: 350 YAISLS 355
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 75 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 134
G S + LR+++ + GSIIGK G +K IRE S A + ++ P ER I G
Sbjct: 13 GLSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGST 69
Query: 135 DAVTQAIYQICL 146
AV A+ I
Sbjct: 70 AAVFHAVSMIAF 81
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 520 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 579
G S + LR+++ + GSIIGK G +K IRE S A + ++ P ER I G
Sbjct: 13 GLSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGST 69
Query: 580 DAVTQAIYQICL 591
AV A+ I
Sbjct: 70 AAVFHAVSMIAF 81
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 199/339 (58%), Gaps = 45/339 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAMQQSH 220
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++S
Sbjct: 221 FPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMS 270
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
GA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 271 GAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 306
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/331 (41%), Positives = 195/331 (58%), Gaps = 45/331 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ PD L L ++ +H P
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAMQQSHFPMTHG-- 226
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 227 -NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 278
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 279 PV---EGSTDRQVTITGSAASISLAQYLINV 306
Score = 39.7 bits (91), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 209/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSVVPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PAD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPTPFSPPLTALPTAPP 343
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 206/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPTP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 200/340 (58%), Gaps = 49/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I +EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIDKLEEDISSSMSNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD+ L LA Q
Sbjct: 189 FAGGQAYAVQGQHAIPQPDL---------------------------TKLHQLAMQQSPF 221
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P +Q D +Q + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 222 PLAPSSQGFTAGM------DATTQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQ 268
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ E SNDR +T+TG+P +I+LA+YLIN
Sbjct: 269 MSGAQIKIANPV---EGSNDRQVTITGSPASISLAEYLIN 305
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 196/332 (59%), Gaps = 49/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+AFS+I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMSNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD+ L LA Q P +Q
Sbjct: 197 VQGQHAIPQPDL---------------------------TKLHQLAMQQSPFPLAPSSQG 229
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
D +Q + E+T+PN+LIG +IG+ G KI EIR++SGA I+I
Sbjct: 230 FTAGM------DATTQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E SNDR +T+TG+P +I+LA+YLIN
Sbjct: 277 ANPV---EGSNDRQVTITGSPASISLAEYLIN 305
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 154/377 (40%), Positives = 210/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -----SL------------SLGTVLLSANQGFPVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSVVPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G S D S+
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG--STPADLSA- 329
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 330 ---PFSPPLTALPTAPP 343
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 207/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -SL------------SLGTVLLSANQGFPVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G S D S+ P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG--STPADLSA----P 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 102/254 (40%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFPVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P + P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSTPADLSAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFPVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P + P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSTPADLSAPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 154/377 (40%), Positives = 211/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 680
SL +G + N G S G G + A + L QL + +P
Sbjct: 185 -----SLSLGTVLLSTN----------QGFSVQGQYGTVTPAEVTKL--QQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSMVPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPAPFSPPLTALPTAPP 343
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 208/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
SL +G + N G S G G + A + L QL + +P
Sbjct: 185 -SLSLGTVLLSTN----------QGFSVQGQYGTVTPAEVTKL--QQLSGHAVPFASPSM 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDLPAP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 207/358 (57%), Gaps = 62/358 (17%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
GG +Q MQ S GN +G+ + +S ++
Sbjct: 191 GGQLTKLHQLAMQQSHFPMTH-GNTGFSGIES-----------------------SSPEV 226
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
K D +Q T+ E+T+PN+LIG +IG+ G KI EI
Sbjct: 227 K---------------GYWGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEI 264
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
R++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 265 RQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 312
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 144/350 (41%), Positives = 203/350 (58%), Gaps = 62/350 (17%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG +
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQLTKLH 198
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
Q MQ S GN +G+ + +S ++K
Sbjct: 199 QLAMQQSHFPMTH-GNTGFSGIES-----------------------SSPEVK------- 227
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I
Sbjct: 228 --------GYWGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 272
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 273 KIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 312
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 208/376 (55%), Gaps = 52/376 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
SL L + L N G + G A A + Q + H
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ + D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 228 SPSMVP----GLDPGTQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 276
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 277 IGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDL 327
Query: 802 NLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 328 PAPFSPPLTALPTAPP 343
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
SL L + L N G + G A A + Q + H + +
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 231
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VP----GLDPGTQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 279
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDLPAPF 331
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 332 SPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 70/246 (28%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I I
Sbjct: 112 QCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVIL 171
Query: 62 E---------FHKN---------QNKHLGGNGE---------SQLIQL------------ 82
E +H + N+ G+ ++L QL
Sbjct: 172 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 231
Query: 83 -------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+VP G +IG+ GS+I IR+ SGA + + + + ER V
Sbjct: 232 VPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVT 290
Query: 130 IKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGLIGNQ 176
I G P ++ A Y I CL S P P+ P P A PGL+G
Sbjct: 291 ITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSP-PLTALPTAPPGLLGTP 349
Query: 177 FGMQNS 182
+ + S
Sbjct: 350 YAISLS 355
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 208/376 (55%), Gaps = 52/376 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
SL L + L N G + G A A + Q + H
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ + D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 228 SPSMVP----GLDPGAQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 276
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 277 IGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDL 327
Query: 802 NLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 328 PAPFSPPLTALPTAPP 343
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
SL L + L N G + G A A + Q + H + +
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 231
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VP----GLDPGAQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 279
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDLPAPF 331
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 332 SPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 70/246 (28%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I I
Sbjct: 112 QCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVIL 171
Query: 62 E---------FHKN---------QNKHLGGNGE---------SQLIQL------------ 82
E +H + N+ G+ ++L QL
Sbjct: 172 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 231
Query: 83 -------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+VP G +IG+ GS+I IR+ SGA + + + + ER V
Sbjct: 232 VPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVT 290
Query: 130 IKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGLIGNQ 176
I G P ++ A Y I CL S P P+ P P A PGL+G
Sbjct: 291 ITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSP-PLTALPTAPPGLLGTP 349
Query: 177 FGMQNS 182
+ + S
Sbjct: 350 YAISLS 355
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 211/355 (59%), Gaps = 36/355 (10%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMG-NNPLAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + G + AP M N+ L G A + G + L L
Sbjct: 191 GGQDRYSS--GSASYPHTAPSMCLNSDLEGPPQEAYTIQGQY------AIPQPDLTKLHQ 242
Query: 670 SQLKTNHMPRN---------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGA 720
++ +H P + ++ + D +Q T+ E+T+PN+LIG
Sbjct: 243 LAMQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASAQTTSH-------ELTIPNDLIGC 295
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
+IG+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 296 IIGRQGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 347
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 207/347 (59%), Gaps = 36/347 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG +
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSS 198
Query: 176 QFGMQNSLMGAPDMG-NNPLAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
G + AP M N+ L G A + G + L L ++ +H
Sbjct: 199 --GSASYPHTAPSMCLNSDLEGPPQEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 250
Query: 233 PRN---------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTK 283
P + ++ + D +Q T+ E+T+PN+LIG +IG+ G K
Sbjct: 251 PMSHGNTGFSGIESSSPEVKGYWGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAK 303
Query: 284 IFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
I EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 304 INEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 347
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDN-NLPSSAPLA 365
+ + + V +L + G GG+ D +SS + + P +AP
Sbjct: 156 --IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQ---DRYSSGSASYPHTAPSM 210
Query: 366 GLNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFG 422
LN+ P A Q + +P LT L L S G +G SG
Sbjct: 211 CLNSDLEGPPQEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMSHGNTGFSGIES 264
Query: 423 GVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SST 480
P+ Y + + + +G IIG+ G + ++R+ SG++I I++ +
Sbjct: 265 SSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 324
Query: 481 PERIVTVIGSMDSLFRAFSLI 501
+R VT+ GS S+ A LI
Sbjct: 325 TDRQVTITGSAASISLAQYLI 345
Score = 39.7 bits (91), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 209/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ P+ +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSVVPGLD------PAAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R IT+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 276 KIGN---QAEGAGERHITITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PAD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPAPFSPPLTALPTAPP 343
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 206/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P+ +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PAAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R IT+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHITITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPAP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSVVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER + I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHITITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSVVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R + I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHITITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
Score = 40.0 bits (92), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 585 AIYQICL 591
A+ I
Sbjct: 75 AVSMIAF 81
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 209/349 (59%), Gaps = 23/349 (6%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMG-NNPLAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + G + AP M N+ L G A + G + L L
Sbjct: 191 GGQDRYSS--GSASYPHTAPSMCLNSDLEGPPQEAYTIQGQY------AIPQPDLTKLHQ 242
Query: 670 SQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
++ +H P N + + + G + + E+T+PN+LIG +IG+ G
Sbjct: 243 LAMQQSHFPMSHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 302
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 303 AKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 348
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 205/341 (60%), Gaps = 23/341 (6%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG +
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSS 198
Query: 176 QFGMQNSLMGAPDMG-NNPLAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
G + AP M N+ L G A + G + L L ++ +H
Sbjct: 199 --GSASYPHTAPSMCLNSDLEGPPQEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 250
Query: 233 PR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 251 PMSHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 310
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
+SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 311 MSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 348
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 43/266 (16%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDN-NLPSSAPLA 365
+ + + V +L + G GG+ D +SS + + P +AP
Sbjct: 156 --IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQ---DRYSSGSASYPHTAPSM 210
Query: 366 GLNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFG 422
LN+ P A Q + +P LT L L S G +G SG
Sbjct: 211 CLNSDLEGPPQEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMSHGNTGFSGIES 264
Query: 423 GVPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
P+ Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I I++
Sbjct: 265 SSPEVKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIAN 320
Query: 478 --SSTPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 321 PVEGSTDRQVTITGSAASISLAQYLI 346
Score = 39.7 bits (91), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 205/341 (60%), Gaps = 51/341 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I + +EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIEKLEEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGN-NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
G + +Q + PD+ + LA + G + G GG++A+A +
Sbjct: 189 FAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPMGPNNPGFQGGMDASAQTS------- 241
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
+ EMT+PN+LIG +IG+ G+KI EIR
Sbjct: 242 ----------------------------------SHEMTIPNDLIGCIIGRQGSKINEIR 267
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ E S DR +T+TG+ +I+LA+YLIN
Sbjct: 268 QMSGAQIKIANPV---EGSADRQVTITGSAASISLAEYLIN 305
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 201/333 (60%), Gaps = 51/333 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+AFS+I + +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGN-NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+Q + PD+ + LA + G + G GG++A+A +
Sbjct: 197 VQGQHAIPQPDLTKLHQLAMQQSPFPMGPNNPGFQGGMDASAQTS--------------- 241
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ EMT+PN+LIG +IG+ G+KI EIR++SGA I+
Sbjct: 242 --------------------------SHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIK 275
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ E S DR +T+TG+ +I+LA+YLIN
Sbjct: 276 IANPV---EGSADRQVTITGSAASISLAEYLIN 305
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 219/401 (54%), Gaps = 60/401 (14%)
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
SG GG+ + P + + +R +M GKEVGSIIGK GETVK++RE+S ++I IS+
Sbjct: 2 SGSDGGLEEEPELS------ITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
S PERI T+ GS ++F A S+I ++E + GGN + LRL++PASQCG
Sbjct: 56 GSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCG 114
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+ + QIC ++++SP
Sbjct: 115 SLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESP 174
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
PKGATIPY P SL L + L N G + G
Sbjct: 175 PKGATIPYHP-------------------SL------------SLGTVLLSANQGFSVQG 203
Query: 658 GLNAAALAALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
A + QL ++ +P + P +T+ Q E VPN+
Sbjct: 204 QYGAVTPTEVTKLQQLSSHAVPFATPSVVPGLD------PGTQTSSQ------EFLVPND 251
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALAQYLI
Sbjct: 252 LIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALAQYLITAC 308
Query: 777 VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+E ++ GG S+ +D P S PL L + P
Sbjct: 309 LETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 343
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 207/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS-SQLKTNHMPRNQNQN 239
SL L + L N G + G A + QL ++ +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFATPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---ADLPAP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 TPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/377 (40%), Positives = 214/377 (56%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + + GG + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCSAPAN-GGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P + G L NQ
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-SLSLGTVLLSANQ 197
Query: 622 -FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 680
F +Q+ GG+ A + L QL + +P
Sbjct: 198 GFSVQSQY----------------------------GGVTPAEVTKL--QQLSGHAVPFG 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSMVPGLD------PGAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---AD 326
Query: 801 NNLPSSAPLAGLNASNP 817
+ P S PL L + P
Sbjct: 327 LSTPFSPPLTALPTAPP 343
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/373 (40%), Positives = 211/373 (56%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + + GG + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCSAPAN-GGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ-FGM 179
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P + G L NQ F +
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-SLSLGTVLLSANQGFSV 201
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
Q+ GG+ A + L QL + +P
Sbjct: 202 QSQY----------------------------GGVTPAEVTKL--QQLSGHAVPFGSPSM 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PGAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D + P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---ADLSTP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 102/254 (40%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FH-----------KNQ----NKHLGGNGESQLIQLR------ 528
I I E +H NQ GG +++ +L+
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQSQYGGVTPAEVTKLQQLSGHA 223
Query: 529 ----------------------LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFGSPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P + P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLSTPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 98/246 (39%), Gaps = 70/246 (28%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I I
Sbjct: 112 QCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVIL 171
Query: 62 E---------FH-----------KNQ----NKHLGGNGESQLIQLR-------------- 83
E +H NQ GG +++ +L+
Sbjct: 172 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQSQYGGVTPAEVTKLQQLSGHAVPFGSPSM 231
Query: 84 --------------LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+VP G +IG+ GS+I IR+ SGA + + + + ER V
Sbjct: 232 VPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVT 290
Query: 130 IKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---GGPGLIGNQ 176
I G P ++ A Y I CL S P + P+ P P A PGL+G
Sbjct: 291 ITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLSTPFSP-PLTALPTAPPGLLGTP 349
Query: 177 FGMQNS 182
+ + S
Sbjct: 350 YAISLS 355
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICLI----MVDSPPKGATIPYRPL 163
A+ I + +P G T+ P+
Sbjct: 75 AVSMIAFKLDEDLCSAPANGGTVSRPPV 102
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 585 AIYQICLI----MVDSPPKGATIPYRPL 608
A+ I + +P G T+ P+
Sbjct: 75 AVSMIAFKLDEDLCSAPANGGTVSRPPV 102
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 208/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSVVPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PAD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPAPFSPPLTALPTAPP 343
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 205/373 (54%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPAP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 70/246 (28%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I I
Sbjct: 112 QCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVIL 171
Query: 62 E---------FHKN---------QNKHLGGNGE---------SQLIQL------------ 82
E +H + N+ G+ ++L QL
Sbjct: 172 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 231
Query: 83 -------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+VP G +IG+ GS+I IR+ SGA + + + + ER V
Sbjct: 232 VPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVT 290
Query: 130 IKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGLIGNQ 176
I G P ++ A Y I CL S P P+ P P A PGL+G
Sbjct: 291 ITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTAPPGLLGTP 349
Query: 177 FGMQNS 182
+ + S
Sbjct: 350 YAISLS 355
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 210/376 (55%), Gaps = 52/376 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
SL L + L N G + G A A + Q + H
Sbjct: 185 -----SL------------SLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ + D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 228 SPSMVP----GLDPGTQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 276
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D
Sbjct: 277 IGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---TDL 327
Query: 802 NLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 328 PAPFSPPLTALPTAPP 343
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/372 (40%), Positives = 207/372 (55%), Gaps = 52/372 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
SL L + L N G + G A A + Q + H + +
Sbjct: 185 -SL------------SLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 231
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VP----GLDPGTQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 279
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D P
Sbjct: 280 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---TDLPAPF 331
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 332 SPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPTDLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPTDLPAPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 201/340 (59%), Gaps = 49/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I + +EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIEKLEEDISSSMSNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD+ L LA Q
Sbjct: 189 FAGGQAYAVQGQHAIPQPDL---------------------------TKLHQLAMQQSPF 221
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P +Q D +Q + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 222 PLAPSSQGFTAGM------DASAQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQ 268
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ E S+DR +T+TG+P +I+LA+YLIN
Sbjct: 269 MSGAQIKIANPV---EGSSDRQVTITGSPASISLAEYLIN 305
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 197/332 (59%), Gaps = 49/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+AFS+I + +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMSNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD+ L LA Q P +Q
Sbjct: 197 VQGQHAIPQPDL---------------------------TKLHQLAMQQSPFPLAPSSQG 229
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
D +Q + E+T+PN+LIG +IG+ G KI EIR++SGA I+I
Sbjct: 230 FTAGM------DASAQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E S+DR +T+TG+P +I+LA+YLIN
Sbjct: 277 ANPV---EGSSDRQVTITGSPASISLAEYLIN 305
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 200/340 (58%), Gaps = 49/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G S+F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I + +EE + + + +RL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIEKLEEDISTSMTNSTATSKPP-VTIRLVVPASQCGSLIGKGGCKIKEIRESAGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L A+ S
Sbjct: 189 FAGGQAYAVQGQHAIPQPD-----LTKLHQL--------------------AMQQSPFPI 223
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H NQ + D +Q + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 224 AH--------SNQGFQAGMDASAQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQ 268
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ E S DR +T+TG+ +I+LA+YLIN
Sbjct: 269 MSGAQIKIANPV---EGSTDRQVTITGSHASISLAEYLIN 305
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 196/332 (59%), Gaps = 49/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G S+F+AFS+I + +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKAFSMIIEKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + +RL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISTSMTNSTATSKPP-VTIRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD L L L A+ S H
Sbjct: 197 VQGQHAIPQPD-----LTKLHQL--------------------AMQQSPFPIAH------ 225
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
NQ + D +Q + E+T+PN+LIG +IG+ G KI EIR++SGA I+I
Sbjct: 226 --SNQGFQAGMDASAQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E S DR +T+TG+ +I+LA+YLIN
Sbjct: 277 ANPV---EGSTDRQVTITGSHASISLAEYLIN 305
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 199/340 (58%), Gaps = 49/340 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I +EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIDKLEEDISSSMSNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P
Sbjct: 131 VQVAGDMLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVT 188
Query: 618 I--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD+ L LA Q
Sbjct: 189 FAGGQAYAVQGQHAIPQPDL---------------------------TKLHQLAMQQSPF 221
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P +Q D +Q + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 222 PLAPSSQGFTAGM------DATTQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQ 268
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SGA I+I+ E SNDR +T+TG+P +I+LA+YLIN
Sbjct: 269 MSGAQIKIANPV---EGSNDRQVTITGSPASISLAEYLIN 305
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 195/332 (58%), Gaps = 49/332 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+AFS+I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMSNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + I G P ++ + + QIC++M++SPPKG TIPYRP P +G P G +
Sbjct: 139 PNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVTFAGGQAYA 196
Query: 179 MQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+Q + PD+ L LA Q P +Q
Sbjct: 197 VQGQHAIPQPDL---------------------------TKLHQLAMQQSPFPLAPSSQG 229
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
D +Q + E+T+PN+LIG +IG+ G KI EIR++SGA I+I
Sbjct: 230 FTAGM------DATTQTGSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ E SNDR +T+TG+P +I+LA+YLIN
Sbjct: 277 ANPV---EGSNDRQVTITGSPASISLAEYLIN 305
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 208/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSVVPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E + G G +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETANSTSGGTPGSA------PAD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPTPFSPPLTALPTAPP 343
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 205/373 (54%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E + G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETANSTSGGTPGSA------PADLPTP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 102/254 (40%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL + S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETANSTSGGTPGSAPADLPTPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL + S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETANSTSGGTPGSAPADLPTPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 210/376 (55%), Gaps = 52/376 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPTN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------S 185
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
+ L+ A N G S G G + +A + L QL + +P
Sbjct: 186 LSLGTVLLSA----NQ-----------GFSVQGQYGAVTSAEVTKL--QQLSGHAVPFAS 228
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 229 PSMVPGLD------PGAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 276
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 277 IGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGST------PTDL 327
Query: 802 NLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 328 PAPFSPPLTALPTAPP 343
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 207/372 (55%), Gaps = 52/372 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPTN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P +
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------SLSLG 189
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
L+ A N G S G G + +A + L QL + +P
Sbjct: 190 TVLLSA----NQ-----------GFSVQGQYGAVTSAEVTKL--QQLSGHAVPFASPSMV 232
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 233 PGLD------PGAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 279
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGST------PTDLPAPF 331
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 332 SPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSTPTDLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 70/246 (28%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I I
Sbjct: 112 QCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVIL 171
Query: 62 E---------FHKN---------QNKHLGGNGE---------SQLIQL------------ 82
E +H + N+ G+ ++L QL
Sbjct: 172 ESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFASPSM 231
Query: 83 -------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+VP G +IG+ GS+I IR+ SGA + + + + ER V
Sbjct: 232 VPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVT 290
Query: 130 IKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGLIGNQ 176
I G P ++ A Y I CL S P P+ P P A PGL+G
Sbjct: 291 ITGSPVSIALAQYLITACLETAKSTSGGTPGSTPTDLPAPFSP-PLTALPTAPPGLLGTP 349
Query: 177 FGMQNS 182
+ + S
Sbjct: 350 YAISLS 355
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 208/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC +++ SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILGSPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSVVPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PAD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPTPFSPPLTALPTAPP 343
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 205/373 (54%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC +++ SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILGSPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPTP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIE---------EFHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILGSPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 97/250 (38%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIE---------EFHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I +H + N+ G+ ++L QL
Sbjct: 168 AVILGSPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 212/368 (57%), Gaps = 32/368 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-- 611
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 612 ---AGGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALA 665
AGG + P M NP L G L A + G + L
Sbjct: 191 VIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLT 244
Query: 666 ALASSQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 722
L ++ +H P N + + + G + + E+T+PN+LIG +I
Sbjct: 245 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCII 304
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRA 782
G+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 305 GRQGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV------- 354
Query: 783 NLNGEGGG 790
L+ E GG
Sbjct: 355 RLSSETGG 362
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 208/360 (57%), Gaps = 32/360 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-----AGGPG 171
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQD 198
Query: 172 LIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
+ P M NP L G L A + G + L L ++
Sbjct: 199 RYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQ 252
Query: 229 TNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 285
+H P N + + + G + + E+T+PN+LIG +IG+ G KI
Sbjct: 253 QSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 312
Query: 286 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 313 EIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 362
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 118/267 (44%), Gaps = 39/267 (14%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 --ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPL 364
+ Q + M L ++ G GG+ S + P + P
Sbjct: 156 IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPS 215
Query: 365 AGLNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGF 421
LN PL A Q + +P LT L L + G +G SG
Sbjct: 216 MCLNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIE 269
Query: 422 GGVPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS 476
P+ Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I I+
Sbjct: 270 SSSPEVKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIA 325
Query: 477 D--SSTPERIVTVIGSMDSLFRAFSLI 501
+ + +R VT+ GS S+ A LI
Sbjct: 326 NPVEGSTDRQVTITGSAASISLAQYLI 352
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 213/374 (56%), Gaps = 45/374 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-- 611
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 612 ---AGGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALA 665
AGG + P M NP L G L A + G + L
Sbjct: 191 VIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLT 244
Query: 666 ALASSQLKTNHMPRN---------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
L ++ +H P ++ + D +Q T+ E+T+PN+
Sbjct: 245 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSH-------ELTIPND 297
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG +IG+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 298 LIGCIIGRQGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV- 353
Query: 777 VELLRANLNGEGGG 790
L+ E GG
Sbjct: 354 ------RLSSETGG 361
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/366 (40%), Positives = 209/366 (57%), Gaps = 45/366 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-----AGGPG 171
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQD 198
Query: 172 LIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
+ P M NP L G L A + G + L L ++
Sbjct: 199 RYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQ 252
Query: 229 TNHMPRN---------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 279
+H P ++ + D +Q T+ E+T+PN+LIG +IG+
Sbjct: 253 QSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSH-------ELTIPNDLIGCIIGR 305
Query: 280 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L
Sbjct: 306 QGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RL 355
Query: 340 NGEGGG 345
+ E GG
Sbjct: 356 SSETGG 361
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 30/262 (11%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 --ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPL 364
+ Q + M L ++ G GG+ S + P + P
Sbjct: 156 IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPS 215
Query: 365 AGLNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGF 421
LN PL A Q + +P LT L L + G +G SG
Sbjct: 216 MCLNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIE 269
Query: 422 GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SS 479
P+ Y + + + +G IIG+ G + ++R+ SG++I I++
Sbjct: 270 SSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG 329
Query: 480 TPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 330 STDRQVTITGSAASISLAQYLI 351
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 205/357 (57%), Gaps = 45/357 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAMQQSH 220
Query: 677 MPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR
Sbjct: 221 FPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 280
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 281 QMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 327
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 201/349 (57%), Gaps = 45/349 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR---NQ 236
+ PD L L ++ +H P N
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAMQQSHFPMTHGNT 228
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ + + G + + E+T+PN+LIG +IG+ G KI EIR++SGA I+
Sbjct: 229 GFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 288
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 289 IANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 327
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 202/341 (59%), Gaps = 51/341 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I + +EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIEKLEEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD-SPPKGATIPYRPLPQNAGGPG 616
V VA DMLPNSTER + I G P ++ + + QIC++M++ SPPKG TIPYRP P +G P
Sbjct: 131 VQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLEQSPPKGVTIPYRPKP--SGSPV 188
Query: 617 LI--GNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
+ G + +Q + PD+ L LA Q
Sbjct: 189 IFAGGQAYAVQGQHAIPQPDL---------------------------TKLHQLAMQQSP 221
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
P NQ D +Q ++ EMT+PN+LIG +IG+ G+KI EIR
Sbjct: 222 FPIAPNNQ-------GFTGMDASAQTSSH-------EMTIPNDLIGCIIGRQGSKINEIR 267
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ + S DR +T+TG+P +I+LA+YLIN
Sbjct: 268 QMSGAQIKIANPV---DGSADRQVTITGSPASISLAEYLIN 305
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 198/333 (59%), Gaps = 51/333 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+AFS+I + +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIEKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD-SPPKGATIPYRPLPQNAGGPGLI--GNQF 177
PNSTER + I G P ++ + + QIC++M++ SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITIAGTPQSIIECVKQICVVMLEQSPPKGVTIPYRPKP--SGSPVIFAGGQAY 196
Query: 178 GMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+Q + PD+ L LA Q P NQ
Sbjct: 197 AVQGQHAIPQPDL---------------------------TKLHQLAMQQSPFPIAPNNQ 229
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
D +Q ++ EMT+PN+LIG +IG+ G+KI EIR++SGA I+
Sbjct: 230 -------GFTGMDASAQTSSH-------EMTIPNDLIGCIIGRQGSKINEIRQMSGAQIK 275
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ + S DR +T+TG+P +I+LA+YLIN
Sbjct: 276 IANPV---DGSADRQVTITGSPASISLAEYLIN 305
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 212/368 (57%), Gaps = 32/368 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 24 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 83
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 84 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-- 611
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P +
Sbjct: 143 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 202
Query: 612 ---AGGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALA 665
AGG + P M NP L G L A + G + L
Sbjct: 203 VIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLT 256
Query: 666 ALASSQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 722
L ++ +H P N + + + G + + E+T+PN+LIG +I
Sbjct: 257 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCII 316
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRA 782
G+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 317 GRQGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV------- 366
Query: 783 NLNGEGGG 790
L+ E GG
Sbjct: 367 RLSSETGG 374
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 208/360 (57%), Gaps = 32/360 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 32 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 91
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 92 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 150
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-----AGGPG 171
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P + AGG
Sbjct: 151 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQD 210
Query: 172 LIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
+ P M NP L G L A + G + L L ++
Sbjct: 211 RYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQ 264
Query: 229 TNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 285
+H P N + + + G + + E+T+PN+LIG +IG+ G KI
Sbjct: 265 QSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 324
Query: 286 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 325 EIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 374
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 118/267 (44%), Gaps = 39/267 (14%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 110 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 167
Query: 322 --ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPL 364
+ Q + M L ++ G GG+ S + P + P
Sbjct: 168 IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPS 227
Query: 365 AGLNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGF 421
LN PL A Q + +P LT L L + G +G SG
Sbjct: 228 MCLNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIE 281
Query: 422 GGVPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS 476
P+ Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I I+
Sbjct: 282 SSSPEVKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIA 337
Query: 477 D--SSTPERIVTVIGSMDSLFRAFSLI 501
+ + +R VT+ GS S+ A LI
Sbjct: 338 NPVEGSTDRQVTITGSAASISLAQYLI 364
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 82
Query: 140 AIYQI 144
A I
Sbjct: 83 AFAMI 87
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 205/357 (57%), Gaps = 45/357 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAMQQSH 220
Query: 677 MPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR
Sbjct: 221 FPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 280
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
++SGA I K++ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 281 QMSGAQI---KTANPVEGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 327
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 201/349 (57%), Gaps = 45/349 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR---NQ 236
+ PD L L ++ +H P N
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAMQQSHFPMTHGNT 228
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ + + G + + E+T+PN+LIG +IG+ G KI EIR++SGA I
Sbjct: 229 GFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQI- 287
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
K++ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 288 --KTANPVEGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 327
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 200/342 (58%), Gaps = 38/342 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAMQQSH 220
Query: 677 MPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR
Sbjct: 221 FPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 280
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 281 QMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 319
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/334 (40%), Positives = 196/334 (58%), Gaps = 38/334 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR---NQ 236
+ PD L L ++ +H P N
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAMQQSHFPMTHGNT 228
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ + + G + + E+T+PN+LIG +IG+ G KI EIR++SGA I+
Sbjct: 229 GFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 288
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 289 IANPV---EGSTDRQVTITGSAASISLAQYLINV 319
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 200/342 (58%), Gaps = 38/342 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAMQQSH 220
Query: 677 MPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR
Sbjct: 221 FPMSHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 280
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 281 QMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV 319
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/334 (40%), Positives = 196/334 (58%), Gaps = 38/334 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR---NQ 236
+ PD L L ++ +H P N
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAMQQSHFPMSHGNT 228
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ + + G + + E+T+PN+LIG +IG+ G KI EIR++SGA I+
Sbjct: 229 GFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 288
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 289 IANPV---EGSTDRQVTITGSAASISLAQYLINV 319
Score = 39.7 bits (91), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 208/356 (58%), Gaps = 34/356 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + L+ LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTN-STAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + IC++M++SPPKG TIPYRP P ++ P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKHICVVMLESPPKGVTIPYRPKPSSS--PVI 188
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G Q+ D A + G + L L ++ +H
Sbjct: 189 FA---GGQDRYSTGSD---------KAYTIQGQY------AIPQPDLTKLHQLAVQQSHF 230
Query: 678 PR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P N + + + G + + E+T+PN+LIG +IG G KI EI +
Sbjct: 231 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGCQGAKINEICQ 290
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+SGA+I+I+ + E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 291 MSGALIKIANTV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 336
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 140/348 (40%), Positives = 204/348 (58%), Gaps = 34/348 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + L+ LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTN-STAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + IC++M++SPPKG TIPYRP P ++ P + G Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKHICVVMLESPPKGVTIPYRPKPSSS--PVIFA---GGQ 193
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR---NQN 237
+ D A + G + L L ++ +H P N
Sbjct: 194 DRYSTGSD---------KAYTIQGQY------AIPQPDLTKLHQLAVQQSHFPMTHGNTG 238
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ + + G + + E+T+PN+LIG +IG G KI EI ++SGA+I+I
Sbjct: 239 FSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKI 298
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ + E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 299 ANTV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 336
Score = 39.7 bits (91), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|328716031|ref|XP_001944817.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 415
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 218/342 (63%), Gaps = 33/342 (9%)
Query: 444 HIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITK 503
I+ GKE+ +IG+ GE V+ LR +S + I I+DSSTPERIVTV G+++ + +AF+LITK
Sbjct: 24 RILMGKEILPLIGEYGEVVRDLRNQSEATITITDSSTPERIVTVTGNINIIQKAFALITK 83
Query: 504 NIEE---FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+E+ H ++ N + + +LIVPASQCGS+IGKGG +I+ IRE SGA V V
Sbjct: 84 ILEQNSPTHLQNSRKPSSNNSTTI---KLIVPASQCGSLIGKGGVKIREIREASGAMVNV 140
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 620
ASD+L NSTER V+I G +A+T+AI+QIC++M+++P +G T+ YRP G L G
Sbjct: 141 ASDLLQNSTERTVSISGTAEAITEAIHQICIVMLETPGRGPTVAYRPFVSQPGPVVLCGG 200
Query: 621 Q-FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM--GGGLNAAALAALASSQLKTNHM 677
Q + +Q SL P +G+ A AAL + + G GL+ + LAALA SQL+
Sbjct: 201 QAYTLQGSL-AIPAVGDQ-TASNAALNTIASIAPNLIAGSGLDPSVLAALAGSQLRGG-- 256
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
G S KT+QQ IT EM +PN++IG +IGKGGTKI EIR+ISG
Sbjct: 257 -----------------GVSSKTSQQ--HITHEMAIPNDIIGCIIGKGGTKIAEIRRISG 297
Query: 738 AMIRISKSSEEEEDSN-DRTITMTGTPDAIALAQYLINMSVE 778
AMIRIS + E E +R IT++G DA+ +A+ LIN+SV+
Sbjct: 298 AMIRISNTEEHEASGKMERAITISGQADAVNVAKTLINLSVD 339
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 174/419 (41%), Positives = 243/419 (57%), Gaps = 62/419 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ GKE+ +IG+ GE V+ LR +S + I I+DSSTPERIVTV G+++ + +AF+LITK +
Sbjct: 26 LMGKEILPLIGEYGEVVRDLRNQSEATITITDSSTPERIVTVTGNINIIQKAFALITKIL 85
Query: 61 EE---FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E+ H ++ N + + +LIVPASQCGS+IGKGG +I+ IRE SGA V VAS
Sbjct: 86 EQNSPTHLQNSRKPSSNNSTTI---KLIVPASQCGSLIGKGGVKIREIREASGAMVNVAS 142
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ- 176
D+L NSTER V+I G +A+T+AI+QIC++M+++P +G T+ YRP G L G Q
Sbjct: 143 DLLQNSTERTVSISGTAEAITEAIHQICIVMLETPGRGPTVAYRPFVSQPGPVVLCGGQA 202
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM--GGGLNAAALAALASSQLKTNHMPR 234
+ +Q SL P +G+ A AAL + + G GL+ + LAALA SQL+
Sbjct: 203 YTLQGSL-AIPAVGDQ-TASNAALNTIASIAPNLIAGSGLDPSVLAALAGSQLRGG---- 256
Query: 235 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
G S KT+QQ IT EM +PN++IG +IGKGGTKI EIR+ISGAM
Sbjct: 257 ---------------GVSSKTSQQ--HITHEMAIPNDIIGCIIGKGGTKIAEIRRISGAM 299
Query: 295 IRISKSSEEEEDSN-DRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDD-- 351
IRIS + E E +R IT++G DA+ +A+ LIN+SV+ N G + D+
Sbjct: 300 IRISNTEEHEASGKMERAITISGQADAVNVAKTLINLSVD----QYNKSSGESVDYDEEF 355
Query: 352 ---FSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLG 407
F++D ++ SNP N L +L AL GL +LLG
Sbjct: 356 PSNFTADAK--TTTETLATLLSNP------------------NGLGALGALTGLKELLG 394
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 206/359 (57%), Gaps = 48/359 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE ++ + + L L+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDIRSSMTNSTAASRPP-VTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QI ++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQIFVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAIQQSH 220
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++S
Sbjct: 221 FPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMS 270
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMD 795
GA I+I+ E S DR +T+TG+ +I+LAQYLIN+ + L+ G G +N D
Sbjct: 271 GAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINVRLSLVTG---GMGSSYNNAD 323
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 140/351 (39%), Positives = 202/351 (57%), Gaps = 48/351 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE ++ + + L L+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDIRSSMTNSTAASRPP-VTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QI ++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQIFVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ PD L L ++ +H P
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAIQQSHFPMTHG-- 226
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 227 -NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 278
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMD 350
E S DR +T+TG+ +I+LAQYLIN+ + L+ G G +N D
Sbjct: 279 PV---EGSTDRQVTITGSAASISLAQYLINVRLSLVTG---GMGSSYNNAD 323
Score = 39.7 bits (91), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 204/358 (56%), Gaps = 56/358 (15%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAG 613
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 614 GPGLIGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G + +Q + PD L L +
Sbjct: 191 VIFAGGQAYTIQGQYAIPQPD------------------------------LTKLHQLAM 220
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
+ +H P N D +Q T+ E+T+PN+LIG +IG+ G KI EI
Sbjct: 221 QQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEI 270
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
R++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 271 RQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 318
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 200/350 (57%), Gaps = 56/350 (16%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAGGPGLIGNQ 176
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++ G
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQA 198
Query: 177 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+ +Q + PD L L ++ +H P
Sbjct: 199 YTIQGQYAIPQPD------------------------------LTKLHQLAMQQSHFPMT 228
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I
Sbjct: 229 HG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 278
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 279 KIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 318
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 204/358 (56%), Gaps = 56/358 (15%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAG 613
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 614 GPGLIGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G + +Q + PD L L +
Sbjct: 191 VIFAGGQAYTIQGQYAIPQPD------------------------------LTKLHQLAM 220
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
+ +H P N D +Q T+ E+T+PN+LIG +IG+ G KI EI
Sbjct: 221 QQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEI 270
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
R++SGA I K++ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 271 RQMSGAQI---KTANPVEGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 318
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 200/350 (57%), Gaps = 56/350 (16%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAGGPGLIGNQ 176
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++ G
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQA 198
Query: 177 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+ +Q + PD L L ++ +H P
Sbjct: 199 YTIQGQYAIPQPD------------------------------LTKLHQLAMQQSHFPMT 228
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
N D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I
Sbjct: 229 HG---NTGFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 278
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
K++ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 279 ---KTANPVEGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 318
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 205/361 (56%), Gaps = 49/361 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEVFSSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAG 613
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 614 GPGLIGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G + +Q + PD L L +
Sbjct: 191 VIFAGGQAYTIQGQYAIPQPD------------------------------LTKLHQLAM 220
Query: 673 KTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
+ +H P N + + + G + + E+T+PN+LIG +IG+ G KI
Sbjct: 221 QQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 280
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 789
EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E G
Sbjct: 281 NEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETG 330
Query: 790 G 790
G
Sbjct: 331 G 331
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 201/353 (56%), Gaps = 49/353 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEVFSSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAGGPGLIGNQ 176
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++ G
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQA 198
Query: 177 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR- 234
+ +Q + PD L L ++ +H P
Sbjct: 199 YTIQGQYAIPQPD------------------------------LTKLHQLAMQQSHFPMT 228
Query: 235 --NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
N + + + G + + E+T+PN+LIG +IG+ G KI EIR++SG
Sbjct: 229 HGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 288
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
A I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 289 AQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 331
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 204/357 (57%), Gaps = 45/357 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD L L ++ +H
Sbjct: 191 GGQAYTIQGQYAIPQPD------------------------------LTKLHQLAMQQSH 220
Query: 677 MPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
P N + + + G + + E+T+PN+LIG +I + G KI EIR
Sbjct: 221 FPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIRRQGAKINEIR 280
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 281 QMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 327
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 200/349 (57%), Gaps = 45/349 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR---NQ 236
+ PD L L ++ +H P N
Sbjct: 199 GQYAIPQPD------------------------------LTKLHQLAMQQSHFPMTHGNT 228
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ + + G + + E+T+PN+LIG +I + G KI EIR++SGA I+
Sbjct: 229 GFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIK 288
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 289 IANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 327
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 205/355 (57%), Gaps = 46/355 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS+I +EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FSMIIDKLEEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G ++ + + QIC++M++SPPKG TIPYRP P +G P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGTAHSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVI 188
Query: 618 I--GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
G + +Q G A+ +S + L+ L LA Q
Sbjct: 189 FAGGQAYAVQ---------------GQHAIPQPDSSSAAISPQLS--KLHQLAMQQGPFP 231
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
NQ D +Q + EMT+PN+LIG +IG+ G KI EIR++
Sbjct: 232 MATCNQ-------GFTGMDASAQACSH-------EMTIPNDLIGCIIGRQGAKISEIRQM 277
Query: 736 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
SGA I+I+ + S DR +T+TG+P +I LA+YLI +A L+ E G
Sbjct: 278 SGAQIKIANPV---DGSTDRQVTITGSPASIGLAEYLI-------KARLSSEATG 322
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 201/347 (57%), Gaps = 46/347 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G ++F+AFS+I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFSMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + + LR++VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTATSKPP-VTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER + I G ++ + + QIC++M++SPPKG TIPYRP P +G P + G +
Sbjct: 139 PNSTERAITIAGTAHSIIECVKQICVVMLESPPKGVTIPYRPKP--SGSPVIFAGGQAYA 196
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
+Q G A+ +S + L+ L LA Q NQ
Sbjct: 197 VQ---------------GQHAIPQPDSSSAAISPQLS--KLHQLAMQQGPFPMATCNQ-- 237
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
D +Q + EMT+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 238 -----GFTGMDASAQACSH-------EMTIPNDLIGCIIGRQGAKISEIRQMSGAQIKIA 285
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ S DR +T+TG+P +I LA+YLI +A L+ E G
Sbjct: 286 NPV---DGSTDRQVTITGSPASIGLAEYLI-------KARLSSEATG 322
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 201/341 (58%), Gaps = 33/341 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAG 613
V VA DMLPNSTER V I G PDA+ Q + QIC++M++ SPP+G + P P A
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEVQSKSPPRGVSRVVAPKP--AS 188
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
P + G ++ G + + L L L + +G A A ++
Sbjct: 189 TPVIFAG--GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVPFVR 246
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
+ + + + H E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 247 SPWACLDASPPASTH---------------------ELTIPNDLIGCIIGRQGTKINEIR 285
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 286 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 323
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 197/333 (59%), Gaps = 33/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAGGPGLIGNQ 176
PNSTER V I G PDA+ Q + QIC++M++ SPP+G + P P A P +
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLEVQSKSPPRGVSRVVAPKP--ASTPVIFAG- 195
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
G ++ G + + L L L + +G A A +++ +
Sbjct: 196 -GQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVPFVRSPWACLDA 254
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ + H E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 255 SPPASTH---------------------ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 293
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 294 IANAT---EGSSERQITITGTPANISLAQYLIN 323
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 204/349 (58%), Gaps = 33/349 (9%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-- 611
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 612 ---AGGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALA 665
AGG + P M NP L G L A + G + L
Sbjct: 191 VIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLT 244
Query: 666 ALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKG 725
L ++ +H P N + D +Q T+ E+T+PN LIG +IG+
Sbjct: 245 KLHQLAMQQSHFPMTHG---NTGFSASLDASTQTTH--------ELTIPNNLIGCIIGRQ 293
Query: 726 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 294 GANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 339
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 200/341 (58%), Gaps = 33/341 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-----AGGPG 171
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQD 198
Query: 172 LIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
+ P M NP L G L A + G + L L ++
Sbjct: 199 RYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQ 252
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
+H P N + D +Q T+ E+T+PN LIG +IG+ G I EIR
Sbjct: 253 QSHFPMTHG---NTGFSASLDASTQTTH--------ELTIPNNLIGCIIGRQGANINEIR 301
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 302 QMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 339
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 196/337 (58%), Gaps = 50/337 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 1 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 60
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 61 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 119
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAGGPGLIGNQ 176
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++ G
Sbjct: 120 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQA 179
Query: 177 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+ +Q + PD L L ++ +H P
Sbjct: 180 YTIQGQYAIPQPD------------------------------LTKLHQLAMQQSHFPMT 209
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+ D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I
Sbjct: 210 HGNT----GFSGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 258
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+I+ E S DR +T+TG+ +I+LAQYLIN+S
Sbjct: 259 KIANPV---EGSTDRQVTITGSAASISLAQYLINVSC 292
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 196/337 (58%), Gaps = 50/337 (14%)
Query: 446 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 505
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 1 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 60
Query: 506 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 565
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 61 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 119
Query: 566 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAGGPGLIGNQ 621
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++ G
Sbjct: 120 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQA 179
Query: 622 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 680
+ +Q + PD L L ++ +H P
Sbjct: 180 YTIQGQYAIPQPD------------------------------LTKLHQLAMQQSHFPMT 209
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I
Sbjct: 210 HGNT----GFSGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 258
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+I+ E S DR +T+TG+ +I+LAQYLIN+S
Sbjct: 259 KIANPV---EGSTDRQVTITGSAASISLAQYLINVSC 292
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 205/361 (56%), Gaps = 49/361 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAG 613
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 614 GPGLIGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G + +Q + PD L L +
Sbjct: 191 VIFAGGQAYTIQGQYAIPQPD------------------------------LTKLHQLAM 220
Query: 673 KTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
+ +H P N + + + G + + E+T+PN+LIG +IG+ G KI
Sbjct: 221 QQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 280
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 789
EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E G
Sbjct: 281 NEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETG 330
Query: 790 G 790
G
Sbjct: 331 G 331
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 201/353 (56%), Gaps = 49/353 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAGGPGLIGNQ 176
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++ G
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQA 198
Query: 177 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR- 234
+ +Q + PD L L ++ +H P
Sbjct: 199 YTIQGQYAIPQPD------------------------------LTKLHQLAMQQSHFPMT 228
Query: 235 --NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
N + + + G + + E+T+PN+LIG +IG+ G KI EIR++SG
Sbjct: 229 HGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 288
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
A I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 289 AQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 331
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/353 (41%), Positives = 203/353 (57%), Gaps = 28/353 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 24 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 83
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 84 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 142
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-- 611
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P +
Sbjct: 143 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 202
Query: 612 ---AGGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALA 665
AGG + P M NP L G L A + G + L
Sbjct: 203 VIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLT 256
Query: 666 ALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK----TNQQQNQITKEMTVPNELIGAV 721
L ++ +H P + P K + Q T E+T+PN LIG +
Sbjct: 257 KLHQLAMQQSHFP--MTHGNTGFSGIESSSPEVKGYWASLDASTQTTHELTIPNNLIGCI 314
Query: 722 IGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 315 IGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 364
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 199/345 (57%), Gaps = 28/345 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 32 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 91
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 92 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 150
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-----AGGPG 171
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P + AGG
Sbjct: 151 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQD 210
Query: 172 LIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
+ P M NP L G L A + G + L L ++
Sbjct: 211 RYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQ 264
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPSQK----TNQQQNQITKEMTVPNELIGAVIGKGGTKI 284
+H P + P K + Q T E+T+PN LIG +IG+ G I
Sbjct: 265 QSHFP--MTHGNTGFSGIESSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANI 322
Query: 285 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 323 NEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 364
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 110/262 (41%), Gaps = 30/262 (11%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 110 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 167
Query: 322 --ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPL 364
+ Q + M L ++ G GG+ S + P + P
Sbjct: 168 IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPS 227
Query: 365 AGLNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGF 421
LN PL A Q + +P LT L L + G +G SG
Sbjct: 228 MCLNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIE 281
Query: 422 GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SS 479
P+ Y Q + +G IIG+ G + ++R+ SG++I I++
Sbjct: 282 SSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEG 341
Query: 480 TPERIVTVIGSMDSLFRAFSLI 501
+ R VT+ GS S+ A LI
Sbjct: 342 SSGRQVTITGSAASISLAQYLI 363
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 82
Query: 140 AIYQI 144
A I
Sbjct: 83 AFAMI 87
>gi|281341187|gb|EFB16771.1| hypothetical protein PANDA_007698 [Ailuropoda melanoleuca]
Length = 323
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 196/337 (58%), Gaps = 38/337 (11%)
Query: 12 KSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHL 71
+ GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I EE N +
Sbjct: 4 QKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNS 63
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
+ + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DMLPNSTER V I
Sbjct: 64 PATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTIS 122
Query: 132 GVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGMQNSLMGAPDMG 190
G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P + G Q +
Sbjct: 123 GTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVIFAGGQ------------VR 168
Query: 191 NNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG 250
+PLA A L A+ L H Q + N
Sbjct: 169 ADPLAASTA-NLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAF 227
Query: 251 PSQK-----TNQQQNQI-------------TKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P +K + + QN + T E+T+PN+LIG +IG+ GTKI EIR++SG
Sbjct: 228 PGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 287
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
A I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 288 AQIKIANAT---EGSSERQITITGTPANISLAQYLIN 321
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 196/337 (58%), Gaps = 38/337 (11%)
Query: 457 KSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHL 516
+ GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I EE N +
Sbjct: 4 QKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNS 63
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+ + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DMLPNSTER V I
Sbjct: 64 PATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTIS 122
Query: 577 GVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGMQNSLMGAPDMG 635
G PDA+ Q + QIC++M++SPPKGATIPYR P+ A P + G Q +
Sbjct: 123 GTPDAIIQCVKQICVVMLESPPKGATIPYR--PKPASTPVIFAGGQ------------VR 168
Query: 636 NNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG 695
+PLA A L A+ L H Q + N
Sbjct: 169 ADPLAASTA-NLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAF 227
Query: 696 PSQK-----TNQQQNQI-------------TKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
P +K + + QN + T E+T+PN+LIG +IG+ GTKI EIR++SG
Sbjct: 228 PGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 287
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
A I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 288 AQIKIANAT---EGSSERQITITGTPANISLAQYLIN 321
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 71 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 128
Query: 322 ALAQYLINMSVELLRANLNG 341
Q + + V +L + G
Sbjct: 129 --IQCVKQICVVMLESPPKG 146
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 71 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 128
Query: 767 ALAQYLINMSVELLRANLNG 786
Q + + V +L + G
Sbjct: 129 --IQCVKQICVVMLESPPKG 146
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK G +K++RE +G+++ ++ P ER VT+ G+ D++ +
Sbjct: 73 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 132
Query: 499 SLIT 502
I
Sbjct: 133 KQIC 136
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 217/409 (53%), Gaps = 70/409 (17%)
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
SG GG+ + P + + +R +M GKEVGSIIGK GETVK++RE+S ++I IS+
Sbjct: 2 SGSDGGLEEEPELS------ITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
S ERI T+ GS ++F A S+I ++E + GGN + LRL++PASQCG
Sbjct: 56 GSFLERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCG 114
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IG+ G++IK IRET+GA V VA D+ PNSTER V + GVPDA+ + QIC ++++SP
Sbjct: 115 SLIGQAGTKIKEIRETTGAQVQVAGDLFPNSTERAVTVSGVPDAIILCVRQICAVILESP 174
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
PKGATIPY P SL L + L N G + G
Sbjct: 175 PKGATIPYHP-------------------SL------------SLGTVLLSANQGFSVQG 203
Query: 658 GLNAAALAALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
A + QL ++ +P + P +T+ Q E VPN+
Sbjct: 204 QYGAVTQREVTKLQQLSSHAVPFATPSVVPGLD------PGTQTSSQ------EFLVPND 251
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALAQYLI
Sbjct: 252 LIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALAQYLITAC 308
Query: 777 VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQL 825
+E + S+ PSSAP +P ALPQL
Sbjct: 309 LETAK----------------STSGGTPSSAPADLPAPFSPPLTALPQL 341
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 205/381 (53%), Gaps = 64/381 (16%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S ERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSFLERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IG+ G++IK IRET+GA V VA D+
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQVAGDLF 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS-SQLKTNHMPRNQNQN 239
SL L + L N G + G A + QL ++ +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTQREVTKLQQLSSHAVPFATPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E + S+ P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAK----------------STSGGTP 320
Query: 360 SSAPLAGLNASNPLAAALPQL 380
SSAP +P ALPQL
Sbjct: 321 SSAPADLPAPFSPPLTALPQL 341
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 197/331 (59%), Gaps = 28/331 (8%)
Query: 11 GKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKH 70
GK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +EE + +
Sbjct: 22 GKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTN 81
Query: 71 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
+ + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DMLPNSTER + I
Sbjct: 82 STAASKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI 140
Query: 131 KGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGNQFGMQNSLMG 185
G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG +
Sbjct: 141 AGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHT 200
Query: 186 APDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQ 242
P M NP L G L A + G + L L ++ +H P N
Sbjct: 201 TPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHFPMTHG---NT 251
Query: 243 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 302
D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 252 GFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV- 303
Query: 303 EEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
E S DR +T+TG+ +I+LAQYLIN+S+E
Sbjct: 304 --EGSTDRQVTITGSAASISLAQYLINVSLE 332
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 197/331 (59%), Gaps = 28/331 (8%)
Query: 456 GKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKH 515
GK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +EE + +
Sbjct: 22 GKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTN 81
Query: 516 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 575
+ + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DMLPNSTER + I
Sbjct: 82 STAASKPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI 140
Query: 576 KGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGNQFGMQNSLMG 630
G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG +
Sbjct: 141 AGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHT 200
Query: 631 APDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQ 687
P M NP L G L A + G + L L ++ +H P N
Sbjct: 201 TPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHFPMTHG---NT 251
Query: 688 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 747
D +Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 252 GFSAGLDASAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV- 303
Query: 748 EEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
E S DR +T+TG+ +I+LAQYLIN+S+E
Sbjct: 304 --EGSTDRQVTITGSAASISLAQYLINVSLE 332
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 42/265 (15%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA ++++ + +S +R IT+ G P +I
Sbjct: 90 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIAGIPQSI 147
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
+ + + V +L + G GG+ S + P + P
Sbjct: 148 I--ECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMC 205
Query: 367 LNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG 423
LN PL A Q + +P LT L L + G +G S G
Sbjct: 206 LNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHFP--MTHGNTGFSAGLD- 258
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTP 481
A+ QTT + + + + +G IIG+ G + ++R+ SG++I I++ +
Sbjct: 259 -------ASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 307
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIE 506
+R VT+ GS S+ A LI ++E
Sbjct: 308 DRQVTITGSAASISLAQYLINVSLE 332
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 142/194 (73%), Gaps = 10/194 (5%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+A
Sbjct: 16 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA 75
Query: 498 FSLITKNIEE----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
F+LI K EE FH Q+ GG I LRLIVPASQCGS+IGKGGS+IK IRE
Sbjct: 76 FTLICKKFEEWCSQFHDIQS---GGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREV 132
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
+GAS+ VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ G
Sbjct: 133 TGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VG 191
Query: 614 GPGLI--GNQFGMQ 625
GP ++ G + +Q
Sbjct: 192 GPLILAGGQAYTIQ 205
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 138/186 (74%), Gaps = 10/186 (5%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+AF+LI K
Sbjct: 24 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKF 83
Query: 61 EE----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
EE FH Q+ GG I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VA
Sbjct: 84 EEWCSQFHDIQS---GGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA 140
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--G 174
S+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++ G
Sbjct: 141 SEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPLILAGG 199
Query: 175 NQFGMQ 180
+ +Q
Sbjct: 200 QAYTIQ 205
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 125/190 (65%), Gaps = 28/190 (14%)
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 271
GGLN AALAALA SQL+T+ N N+ Q NN+ T EMTVPNE
Sbjct: 336 GGLNPAALAALAGSQLRTS------NTNRQQPAANNQ--------------THEMTVPNE 375
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 331
LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLI+MS
Sbjct: 376 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMS 435
Query: 332 VELLRANL---NGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPG 388
VEL +ANL N + G + + PS+ ++PLA+A+P LAQ+L+KPG
Sbjct: 436 VELQKANLEAQNTQTPGSGTTPGATGASASPSNT----TTTASPLASAIP-LAQLLSKPG 490
Query: 389 ALNALTSLSA 398
ALNAL+SL+A
Sbjct: 491 ALNALSSLTA 500
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 120/190 (63%), Gaps = 28/190 (14%)
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
GGLN AALAALA SQL+T+ N N+ Q NN+ T EMTVPNE
Sbjct: 336 GGLNPAALAALAGSQLRTS------NTNRQQPAANNQ--------------THEMTVPNE 375
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLI+MS
Sbjct: 376 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMS 435
Query: 777 VELLRANL---NGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPA 833
VEL +ANL N + G + + PS+ ++PLA+A+P LAQ+L+KP
Sbjct: 436 VELQKANLEAQNTQTPGSGTTPGATGASASPSNT----TTTASPLASAIP-LAQLLSKPG 490
Query: 834 GLNASNPLAA 843
LNA + L A
Sbjct: 491 ALNALSSLTA 500
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTSEAI 161
Query: 322 ALAQYLI 328
Y I
Sbjct: 162 TQCIYHI 168
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTSEAI 161
Query: 767 ALAQYLI 773
Y I
Sbjct: 162 TQCIYHI 168
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQA 140
+ VP G IIGKGG++I IR+ SGA + + + +T+R + I G PDAV A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 428
Query: 141 IYQICL 146
Y I +
Sbjct: 429 QYLISM 434
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQA 585
+ VP G IIGKGG++I IR+ SGA + + + +T+R + I G PDAV A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 428
Query: 586 IYQICL 591
Y I +
Sbjct: 429 QYLISM 434
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 137 VTQAIYQIC 145
+ +A IC
Sbjct: 72 IFKAFTLIC 80
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 582 VTQAIYQIC 590
+ +A IC
Sbjct: 72 IFKAFTLIC 80
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 213/373 (57%), Gaps = 50/373 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDG-----PSQK-----TNQQQNQITKEMTVPNEL 717
K N + R Q+ H G P K + + E+T+PN+L
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDASAQTTSHELTIPNDL 291
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
IG +IG+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 292 IGCIIGRQGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-- 346
Query: 778 ELLRANLNGEGGG 790
L+ E GG
Sbjct: 347 -----RLSSETGG 354
Score = 229 bits (583), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 209/365 (57%), Gaps = 50/365 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDG-----PSQK-----TNQQQNQITKEMTVPNELIGAVIGKG 280
+ R Q+ H G P K + + E+T+PN+LIG +IG+
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQ 299
Query: 281 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 340
G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+
Sbjct: 300 GAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLS 349
Query: 341 GEGGG 345
E GG
Sbjct: 350 SETGG 354
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 156 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 209
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSSGGGSGNSGGFGGV----PQGP 428
L P L+A + S L L+ + S GF G+ P+
Sbjct: 210 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 268
Query: 429 NY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTP 481
Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I I++ +
Sbjct: 269 GYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 324
Query: 482 ERIVTVIGSMDSLFRAFSLI 501
+R VT+ GS S+ A LI
Sbjct: 325 DRQVTITGSAASISLAQYLI 344
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 141/191 (73%), Gaps = 4/191 (2%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+A
Sbjct: 16 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA 75
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
F+LI K EE+ + G G + I LRLIVPASQCGS+IGKGGS+IK IRE +GA
Sbjct: 76 FTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 135
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
S+ VASDMLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP
Sbjct: 136 SIQVASDMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPV 194
Query: 617 LI--GNQFGMQ 625
++ G + +Q
Sbjct: 195 ILAGGQAYTIQ 205
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 137/183 (74%), Gaps = 4/183 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+AF+LI K
Sbjct: 24 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKF 83
Query: 61 EEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EE+ + G G + I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VASDM
Sbjct: 84 EEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDM 143
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQF 177
LPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++ G +
Sbjct: 144 LPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPVILAGGQAY 202
Query: 178 GMQ 180
+Q
Sbjct: 203 TIQ 205
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 212/432 (49%), Gaps = 83/432 (19%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK G +K++RE +G+ I ++ P ER VT+ G+ +++ + I +
Sbjct: 114 QCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSEAITQCIYHICCVML 173
Query: 62 E-------FHKNQNKHLGG-----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
E +GG G++ IQ VPA S + T+
Sbjct: 174 ESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAH----------SDVSTVLPLP 223
Query: 110 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG 169
+ L T P + A ++ + P P P +A
Sbjct: 224 APAAGPTPPSLNTQTLTTSPFAAHPSSSAFAASHGHPLLSTAHLTTPHHPLHPSPLHASV 283
Query: 170 PGLIGNQF---GMQNSL---------MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 217
GL +Q +L MG +G+NPLAGLAALGLGG + GGLN A
Sbjct: 284 AGLADPLLKSGHLQAALPPAHLVADAMG--KLGSNPLAGLAALGLGGLATPANTGGLNPA 341
Query: 218 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 277
ALAALA SQL+T+ N N+ Q NN+ T EMTVPNELIG +I
Sbjct: 342 ALAALAGSQLRTS------NTNRQQPAANNQ--------------THEMTVPNELIGCII 381
Query: 278 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRA 337
GKGGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA++LAQYLI+MSVEL +A
Sbjct: 382 GKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQYLISMSVELQKA 441
Query: 338 NLNGEGGGESNMDDFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTK 386
NL + + P S G + ++PLA+A+P LAQ+L+K
Sbjct: 442 NLEAQ------------NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSK 488
Query: 387 PGALNALTSLSA 398
PGALNAL+SL+A
Sbjct: 489 PGALNALSSLTA 500
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 218/462 (47%), Gaps = 94/462 (20%)
Query: 420 GFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS 479
G GGVP+ P +R I+ + GS+IGK G +K++RE +G+ I ++
Sbjct: 95 GSGGVPRPP-----------ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDM 143
Query: 480 TP---ERIVTVIGSMDSLFRAFSLITKNIEE-------FHKNQNKHLGG-----NGESQL 524
P ER VT+ G+ +++ + I + E +GG G++
Sbjct: 144 LPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQVGGPVILAGGQAYT 203
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
IQ VPA S + T+ + L T P +
Sbjct: 204 IQGNYAVPAH----------SDVSTVLPLPAPAAGPTPPSLNTQTLTTSPFAAHPSSSAF 253
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQF---GMQNSL---------MGAP 632
A ++ + P P P +A GL +Q +L MG
Sbjct: 254 AASHGHPLLSTAHLTTPHHPLHPSPLHASVAGLADPLLKSGHLQAALPPAHLVADAMG-- 311
Query: 633 DMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNN 692
+G+NPLAGLAALGLGG + GGLN AALAALA SQL+T+ N N+ Q NN
Sbjct: 312 KLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTS------NTNRQQPAANN 365
Query: 693 RDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 752
+ T EMTVPNELIG +IGKGGTKI EIR+ISGAMIRIS E E +
Sbjct: 366 Q--------------THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA 411
Query: 753 NDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGL 812
DRTIT+TG PDA++LAQYLI+MSVEL +ANL + + P S G
Sbjct: 412 TDRTITITGNPDAVSLAQYLISMSVELQKANLEAQ------------NTQTPGSGTTPGA 459
Query: 813 N-----------ASNPLAAALPQLAQILTKPAGLNASNPLAA 843
+ ++PLA+A+P LAQ+L+KP LNA + L A
Sbjct: 460 SGASASPSTTTTTASPLASAIP-LAQLLSKPGALNALSSLTA 500
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI EIR+++GA I++ +S+ +S +R +T++GT +AI
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASDMLPNSTERAVTISGTSEAI 161
Query: 322 ALAQYLI 328
Y I
Sbjct: 162 TQCIYHI 168
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 137 VTQAIYQIC 145
+ +A IC
Sbjct: 72 IFKAFTLIC 80
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER V + G ++
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERIVTVTGPTNS 71
Query: 582 VTQAIYQIC 590
+ +A IC
Sbjct: 72 IFKAFTLIC 80
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 197/342 (57%), Gaps = 50/342 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAG 613
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 614 GPGLIGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G + +Q + PD L L +
Sbjct: 191 VIFAGGQAYTIQGQYAIPQPD------------------------------LTKLHQLAM 220
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
+ +H P N + D +Q T+ E+T+PN LIG +IG+ G I EI
Sbjct: 221 QQSHFPMTHG---NTGFSASLDASTQTTH--------ELTIPNNLIGCIIGRQGANINEI 269
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
R++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 270 RQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 308
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/334 (40%), Positives = 193/334 (57%), Gaps = 50/334 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAGGPGLIGNQ 176
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++ G
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQA 198
Query: 177 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+ +Q + PD L L ++ +H P
Sbjct: 199 YTIQGQYAIPQPD------------------------------LTKLHQLAMQQSHFPMT 228
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
N + D +Q T+ E+T+PN LIG +IG+ G I EIR++SGA I
Sbjct: 229 HG---NTGFSASLDASTQTTH--------ELTIPNNLIGCIIGRQGANINEIRQMSGAQI 277
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 278 KIANPV---EGSSGRQVTITGSAASISLAQYLIN 308
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|90081810|dbj|BAE90186.1| unnamed protein product [Macaca fascicularis]
Length = 300
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/311 (43%), Positives = 187/311 (60%), Gaps = 25/311 (8%)
Query: 20 LREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL 79
+REESG++I IS+ + PERIVT+ G D++F+AF++I EE N + +
Sbjct: 1 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPP- 59
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DMLPNSTER V I G PDA+ Q
Sbjct: 60 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 119
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 199
+ QIC++M++SPPKGATIPYRP P A P + G ++ G + + L L
Sbjct: 120 CVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAG--GQAYTIQGQYAIPHPDLTKLHQ 175
Query: 200 LGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQNQNQHNRNNRDGPSQKTNQQ 258
L + +G +TN P + + N G S +
Sbjct: 176 LAMQQTPFPPLG----------------QTNPAFPGEKLPLHSSEEAQNLMGQSSGLDAS 219
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP
Sbjct: 220 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTP 276
Query: 319 DAIALAQYLIN 329
I+LAQYLIN
Sbjct: 277 ANISLAQYLIN 287
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/311 (43%), Positives = 187/311 (60%), Gaps = 25/311 (8%)
Query: 465 LREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL 524
+REESG++I IS+ + PERIVT+ G D++F+AF++I EE N + +
Sbjct: 1 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPP- 59
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DMLPNSTER V I G PDA+ Q
Sbjct: 60 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 119
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 644
+ QIC++M++SPPKGATIPYRP P A P + G ++ G + + L L
Sbjct: 120 CVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAG--GQAYTIQGQYAIPHPDLTKLHQ 175
Query: 645 LGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQNQNQHNRNNRDGPSQKTNQQ 703
L + +G +TN P + + N G S +
Sbjct: 176 LAMQQTPFPPLG----------------QTNPAFPGEKLPLHSSEEAQNLMGQSSGLDAS 219
Query: 704 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 763
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP
Sbjct: 220 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTP 276
Query: 764 DAIALAQYLIN 774
I+LAQYLIN
Sbjct: 277 ANISLAQYLIN 287
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK G +K++RE +G+++ ++ P ER VT+ G+ D++ +
Sbjct: 62 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 121
Query: 499 SLIT 502
I
Sbjct: 122 KQIC 125
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 208/356 (58%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG G+ G ++ D+ PL + G ++ L
Sbjct: 191 PVICAGGQDRCGDAAGYPHA---THDLEGPPLDAYSIQG--------------QHTISPL 233
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
++L N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 234 DLAKL--NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/348 (40%), Positives = 204/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
G+ G ++ D+ PL + G ++ L ++L N
Sbjct: 199 DRCGDAAGYPHA---THDLEGPPLDAYSIQG--------------QHTISPLDLAKL--N 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 219/385 (56%), Gaps = 52/385 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++R+ESG++I I + + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEE-FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
F++I +EE + + K S+L+ LRL+VPA+QCGS+IGKGG +IK IR+++GA
Sbjct: 72 FAMIIYKLEEDINSSMTK---STAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGA 128
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TI Y+P+P
Sbjct: 129 QVQVAGDMLPNSTERAITIAGVPQSVTKCVKQICLVMLETLSHSPQGKVKTILYQPMPSR 188
Query: 612 -----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAA 666
AGG + G ++ D+ PL + G S LN A
Sbjct: 189 SPVTCAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLNLA---- 235
Query: 667 LASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNEL 717
K N + R Q+ H G + + + QIT E+T+PN L
Sbjct: 236 ------KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQITHELTIPNNL 289
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
IG +IG+ GT I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLI
Sbjct: 290 IGCIIGRQGTNINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLI---- 342
Query: 778 ELLRANLNGEGGGESNMDDFSSDNN 802
+A L+ E G + + S +N
Sbjct: 343 ---KARLSSEKGMGCSWNSVGSLDN 364
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 215/377 (57%), Gaps = 52/377 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++R+ESG++I I + + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIRKESGARIKILEGNCPERIITLTGPTNAIFKAFAMIIYKL 79
Query: 61 EE-FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EE + + K S+L+ LRL+VPA+QCGS+IGKGG +IK IR+++GA V VA DM
Sbjct: 80 EEDINSSMTK---STAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQVAGDM 136
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGG 169
LPNSTER + I GVP +VT+ + QICL+M+++ P+G TI Y+P+P AGG
Sbjct: 137 LPNSTERAITIAGVPQSVTKCVKQICLVMLETLSHSPQGKVKTILYQPMPSRSPVTCAGG 196
Query: 170 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 229
+ G ++ D+ PL + G S LN A K
Sbjct: 197 QDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLNLA----------KL 237
Query: 230 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKG 280
N + R Q+ H G + + + QIT E+T+PN LIG +IG+
Sbjct: 238 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQITHELTIPNNLIGCIIGRQ 297
Query: 281 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 340
GT I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLI +A L+
Sbjct: 298 GTNINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLI-------KARLS 347
Query: 341 GEGGGESNMDDFSSDNN 357
E G + + S +N
Sbjct: 348 SEKGMGCSWNSVGSLDN 364
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IR+ SGA + + P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|47214279|emb|CAG01336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 214/402 (53%), Gaps = 77/402 (19%)
Query: 442 MRHIMQGKEVGSIIGK------------------------SGETVKKLREE--------- 468
+R +M GKEVGSIIGK GETVKK+RE+
Sbjct: 18 IRLLMHGKEVGSIIGKVTPANVAAPDRLCSGSDPCSPLFQKGETVKKMREDVGGRVSTWL 77
Query: 469 -----------------SGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
SG++I IS+ + PERIVT+ G D++F+AF++I EE N
Sbjct: 78 SGRLPLPDARLLLSFQQSGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIIN 137
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 571
+ + + LRL+VPASQCGS+IGKGGS+IK +RE++GA V VA DMLPNSTER
Sbjct: 138 SMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTER 196
Query: 572 EVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFGMQNSL- 628
V I G P+A+ Q + QIC++M++SPPKGATIPYRP P A P + G + +Q
Sbjct: 197 AVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFSGGQAYTIQGQYA 254
Query: 629 MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNA-----AALAALASSQLKTNHMPRNQNQ 683
+ PD L+ L L + +G A QL + +P +
Sbjct: 255 IPHPDQ----LSKLHQLAMQQPPFTPLGQTTPAFPGTYPPTWRPRWPQLLLSFVPADARS 310
Query: 684 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 743
+ + D +Q + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+
Sbjct: 311 SSSVT--AALDAGNQAS-------THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 361
Query: 744 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 785
+ E S++R IT+TGTP I+LAQYLIN + A N
Sbjct: 362 NAM---EGSSERQITITGTPANISLAQYLINARFRDVAAMWN 400
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 211/398 (53%), Gaps = 77/398 (19%)
Query: 1 MQGKEVGSIIGK------------------------SGETVKKLREE------------- 23
M GKEVGSIIGK GETVKK+RE+
Sbjct: 22 MHGKEVGSIIGKVTPANVAAPDRLCSGSDPCSPLFQKGETVKKMREDVGGRVSTWLSGRL 81
Query: 24 -------------SGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKH 70
SG++I IS+ + PERIVT+ G D++F+AF++I EE N +
Sbjct: 82 PLPDARLLLSFQQSGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSN 141
Query: 71 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
+ + LRL+VPASQCGS+IGKGGS+IK +RE++GA V VA DMLPNSTER V I
Sbjct: 142 SPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTI 200
Query: 131 KGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFGMQNSL-MGAP 187
G P+A+ Q + QIC++M++SPPKGATIPYRP P A P + G + +Q + P
Sbjct: 201 SGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFSGGQAYTIQGQYAIPHP 258
Query: 188 DMGNNPLAGLAALGLGGNSGGGMGGGLNA-----AALAALASSQLKTNHMPRNQNQNQNQ 242
D L+ L L + +G A QL + +P + + +
Sbjct: 259 DQ----LSKLHQLAMQQPPFTPLGQTTPAFPGTYPPTWRPRWPQLLLSFVPADARSSSSV 314
Query: 243 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 302
D +Q + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ +
Sbjct: 315 T--AALDAGNQAS-------THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM- 364
Query: 303 EEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 340
E S++R IT+TGTP I+LAQYLIN + A N
Sbjct: 365 --EGSSERQITITGTPANISLAQYLINARFRDVAAMWN 400
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHA---THDLEGTPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHA---THDLEGTPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 141/365 (38%), Positives = 206/365 (56%), Gaps = 32/365 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYR----PLP 609
V VA DMLPNSTER + I G+P ++ + + QIC++M++ +PPK IP+R P
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLEVSPQAPPKLQCIPWRLKSSIYP 190
Query: 610 QNAGGPGLIGNQFGMQN-SLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALA 668
Q+ G F S+ PD+ PL G + L L
Sbjct: 191 QDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQG---------QYAIPQPDLTKLH 241
Query: 669 SSQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKG 725
++ +H P N + + + G + + E+T+PN+LIG +IG+
Sbjct: 242 QLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQ 301
Query: 726 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 785
G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+
Sbjct: 302 GAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLS 351
Query: 786 GEGGG 790
E GG
Sbjct: 352 SETGG 356
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 202/357 (56%), Gaps = 32/357 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYR----PLPQNAGGPGL 172
PNSTER + I G+P ++ + + QIC++M++ +PPK IP+R PQ+ G
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLEVSPQAPPKLQCIPWRLKSSIYPQDRYSTGS 198
Query: 173 IGNQFGMQN-SLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 231
F S+ PD+ PL G + L L ++ +H
Sbjct: 199 DSASFPHTTPSMCLNPDLEGPPLEAYTIQG---------QYAIPQPDLTKLHQLAMQQSH 249
Query: 232 MPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR
Sbjct: 250 FPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 309
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 310 QMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 356
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 229 bits (583), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 197/351 (56%), Gaps = 55/351 (15%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAG 613
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 614 GPGLIGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G + +Q + PD L L +
Sbjct: 191 VIFAGGQAYTIQGQYAIPQPD------------------------------LTKLHQLAM 220
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIG 723
+ +H P H G + + + Q T E+T+PN LIG +IG
Sbjct: 221 QQSHFPMT-------HGNTGFSGIESSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIG 273
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 274 RQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 321
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 193/343 (56%), Gaps = 55/343 (16%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAGGPGLIGNQ 176
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++ G
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQA 198
Query: 177 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+ +Q + PD L L ++ +H P
Sbjct: 199 YTIQGQYAIPQPD------------------------------LTKLHQLAMQQSHFPMT 228
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGGTKIFE 286
H G + + + Q T E+T+PN LIG +IG+ G I E
Sbjct: 229 -------HGNTGFSGIESSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINE 281
Query: 287 IRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
IR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 282 IRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 321
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 205/352 (58%), Gaps = 42/352 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I
Sbjct: 176 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMI 235
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA
Sbjct: 236 IDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA 294
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN----- 611
DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 295 GDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVIC 354
Query: 612 AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ 671
AGG + G ++ D+ PL + G S L+ A
Sbjct: 355 AGGQDRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA--------- 396
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVI 722
K N + R Q+ H G + + + Q T E+T+PN LIG +I
Sbjct: 397 -KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCII 455
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 456 GRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 504
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 180 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 239
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 240 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 298
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 299 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 358
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 359 DRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 399
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 400 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 459
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 460 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 504
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 24/259 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 258 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 315
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 316 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 369
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 370 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 428
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 429 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 488
Query: 487 VIGSMDSLFRAFSLITKNI 505
+ GS S+ A LI +
Sbjct: 489 ITGSAASISLAQYLINARL 507
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 128
+ L +G + + +RL++ + GSIIGK G +K IRE SGA + ++ N ER +
Sbjct: 163 RRLTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG---NCPERII 219
Query: 129 NIKGVPDAVTQAIYQI 144
+ G +A+ +A I
Sbjct: 220 TLTGPTNAIFKAFAMI 235
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 573
+ L +G + + +RL++ + GSIIGK G +K IRE SGA + ++ N ER +
Sbjct: 163 RRLTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG---NCPERII 219
Query: 574 NIKGVPDAVTQAIYQI 589
+ G +A+ +A I
Sbjct: 220 TLTGPTNAIFKAFAMI 235
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAVGYPHA---THDLEGPPLDAYSIQGQHTISP------LDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAVGYPHA---THDLEGPPLDAYSIQGQHTISP------LDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 207/356 (58%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G+ I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGSNINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 203/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 SNINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 156 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 209
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 210 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 268
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 269 GYWASLDASTQTTHELTIPNNLIGCIIGRQGSNINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 329 ITGSAASISLAQYLI 343
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 147/192 (76%), Gaps = 5/192 (2%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV GS +++F+A
Sbjct: 13 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGSTNAIFKA 72
Query: 498 FSLITKNIEEF-HKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
F+LI K EE+ + Q+ + GG+G + I LRLIVPASQCGS+IGKGGS+IK IRE +G
Sbjct: 73 FTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 132
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP 615
AS+ VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP
Sbjct: 133 ASIQVASEMLPNSTERAVTISGTGEAITQCIYHICTVMLESPPKGATIPYRPKPQ-VGGP 191
Query: 616 GLI--GNQFGMQ 625
++ G + +Q
Sbjct: 192 VILAGGQAYTIQ 203
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/184 (63%), Positives = 143/184 (77%), Gaps = 5/184 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV GS +++F+AF+LI K
Sbjct: 21 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGSTNAIFKAFTLICKKF 80
Query: 61 EEF-HKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
EE+ + Q+ + GG+G + I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VAS+
Sbjct: 81 EEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASE 140
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQ 176
MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++ G
Sbjct: 141 MLPNSTERAVTISGTGEAITQCIYHICTVMLESPPKGATIPYRPKPQ-VGGPVILAGGQA 199
Query: 177 FGMQ 180
+ +Q
Sbjct: 200 YTIQ 203
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 82/128 (64%), Gaps = 21/128 (16%)
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 271
GGLN AALAALA SQL+T++ QN NQ H EMTVPNE
Sbjct: 290 GGLNPAALAALAGSQLRTSNSRNQQNSNQQTH---------------------EMTVPNE 328
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 331
LIG +IGKGGTKI EIR+ISGAMIRIS + E DRTIT++G PDA+ALAQYLINM
Sbjct: 329 LIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQYLINMR 388
Query: 332 VELLRANL 339
+ + A L
Sbjct: 389 ISMETAGL 396
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 82/128 (64%), Gaps = 21/128 (16%)
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
GGLN AALAALA SQL+T++ QN NQ H EMTVPNE
Sbjct: 290 GGLNPAALAALAGSQLRTSNSRNQQNSNQQTH---------------------EMTVPNE 328
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG +IGKGGTKI EIR+ISGAMIRIS + E DRTIT++G PDA+ALAQYLINM
Sbjct: 329 LIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQYLINMR 388
Query: 777 VELLRANL 784
+ + A L
Sbjct: 389 ISMETAGL 396
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 102 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTGEAI 159
Query: 767 ALAQYLI 773
Y I
Sbjct: 160 TQCIYHI 166
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 68 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 127
NK++ + + + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 3 NKNMINDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 59
Query: 128 VNIKGVPDAVTQAIYQIC 145
V + G +A+ +A IC
Sbjct: 60 VTVTGSTNAIFKAFTLIC 77
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 513 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 572
NK++ + + + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 3 NKNMINDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 59
Query: 573 VNIKGVPDAVTQAIYQIC 590
V + G +A+ +A IC
Sbjct: 60 VTVTGSTNAIFKAFTLIC 77
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 84 LIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQAI 141
+ VP G IIGKGG++I IR+ SGA + + D T+R + I G PDAV A
Sbjct: 323 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQ 382
Query: 142 YQI 144
Y I
Sbjct: 383 YLI 385
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 529 LIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQAI 586
+ VP G IIGKGG++I IR+ SGA + + D T+R + I G PDAV A
Sbjct: 323 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQ 382
Query: 587 YQI 589
Y I
Sbjct: 383 YLI 385
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 21 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 80
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 81 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 140 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 199
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 200 PVICAGGQDRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA----- 245
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 246 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 300
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 301 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 353
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 29 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 88
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 89 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 148 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 207
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 208 DRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 248
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 249 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 308
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 309 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 353
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 107 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 164
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 165 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 218
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSSGGGSGNSGGFGGV----PQGP 428
L P L+A + S L L+ + S GF G+ P+
Sbjct: 219 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 277
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 278 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 337
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 338 ITGSAASISLAQYLI 352
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ N ER + + G +A+ +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG---NCPERIITLTGPTNAIFK 79
Query: 140 AIYQI 144
A I
Sbjct: 80 AFAMI 84
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 11 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 70
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 71 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 129
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 130 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 189
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 190 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----- 235
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 236 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 290
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R IT+TG+ +I+LAQYLIN
Sbjct: 291 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQITITGSAASISLAQYLIN 343
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 19 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 78
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 79 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 137
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 138 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 197
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 198 DRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 238
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 239 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 298
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R IT+TG+ +I+LAQYLIN
Sbjct: 299 ANINEIRQMSGAQIKIANPV---EGSSGRQITITGSAASISLAQYLIN 343
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 97 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 154
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 155 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 208
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSSGGGSGNSGGFGGV----PQGP 428
L P L+A + S L L+ + S GF G+ P+
Sbjct: 209 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 267
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R +T
Sbjct: 268 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQIT 327
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 328 ITGSAASISLAQYLI 342
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 69
Query: 140 AIYQI 144
A I
Sbjct: 70 AFAMI 74
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 156 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 209
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 210 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 268
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 269 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 329 ITGSAASISLAQYLI 343
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 206/352 (58%), Gaps = 42/352 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I
Sbjct: 115 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMI 174
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA
Sbjct: 175 IDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA 233
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN----- 611
DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 234 GDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVIC 293
Query: 612 AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ 671
AGG + G ++ D+ PL + G ++ L ++
Sbjct: 294 AGGQDRCSDAAGYPHATH---DLEGPPLDAYSIQG--------------QHTISPLDLAK 336
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVI 722
L N + R Q+ H G + + + Q T E+T+PN LIG +I
Sbjct: 337 L--NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCII 394
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 395 GRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 443
Score = 225 bits (574), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 203/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 119 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 178
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 179 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 237
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 238 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 297
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G ++ L ++L N
Sbjct: 298 DRCSDAAGYPHATH---DLEGPPLDAYSIQG--------------QHTISPLDLAKL--N 338
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 339 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 398
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 399 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 443
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 197 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 254
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 255 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 308
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 309 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 367
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 368 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 427
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 428 ITGSAASISLAQYLI 442
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 113 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 169
Query: 140 AIYQI 144
A I
Sbjct: 170 AFAMI 174
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 207/356 (58%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G ++ L
Sbjct: 191 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQG--------------QHTISPL 233
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
++L N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 234 DLAKL--NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 203/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G ++ L ++L N
Sbjct: 199 DRCSDAAGYPHA---THDLEGPPLDAYSIQG--------------QHTISPLDLAKL--N 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 156 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 209
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSSGGGSGNSGGFGGV----PQGP 428
L P L+A + S L L+ + S GF G+ P+
Sbjct: 210 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 268
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 269 GYWAGLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 329 ITGSAASISLAQYLI 343
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 11 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 70
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 71 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 129
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 130 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 189
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 190 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----- 235
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 236 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 290
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 291 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 343
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 19 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 78
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 79 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 137
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 138 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 197
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 198 DRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 238
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 239 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 298
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 299 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 343
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 97 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 154
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 155 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 208
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSSGGGSGNSGGFGGV----PQGP 428
L P L+A + S L L+ + S GF G+ P+
Sbjct: 209 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 267
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 268 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 327
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 328 ITGSAASISLAQYLI 342
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 69
Query: 140 AIYQI 144
A I
Sbjct: 70 AFAMI 74
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 205/352 (58%), Gaps = 42/352 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I
Sbjct: 25 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMI 84
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA
Sbjct: 85 IDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA 143
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN----- 611
DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 144 GDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVIC 203
Query: 612 AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ 671
AGG + G ++ D+ PL + G S L+ A
Sbjct: 204 AGGQDRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA--------- 245
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVI 722
K N + R Q+ H G + + + Q T E+T+PN LIG +I
Sbjct: 246 -KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCII 304
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 305 GRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 353
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 29 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 88
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 89 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 148 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 207
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 208 DRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 248
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 249 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 308
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 309 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 353
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 107 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 164
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 165 TECVKQICL---VMLETLSQSPQGRVMTIPYQP---MPASSPVICAGGQDRCSDAAGYPH 218
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 219 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 277
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 278 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 337
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 338 ITGSAASISLAQYLI 352
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 79
Query: 140 AIYQI 144
A I
Sbjct: 80 AFAMI 84
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 79
Query: 585 AIYQI 589
A I
Sbjct: 80 AFAMI 84
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 138/184 (75%), Gaps = 8/184 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +++F+AFSLI
Sbjct: 17 IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNAIFKAFSLI 76
Query: 502 TKNIEEFHKNQNKHLGGNGESQL----IQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
K EEF + Q+ G G + I LRLIVPASQCGS+IGKGGS+IK IRE +GAS
Sbjct: 77 CKKFEEFQELQS----GGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGAS 132
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ AG L
Sbjct: 133 IQVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQVAGPVIL 192
Query: 618 IGNQ 621
G Q
Sbjct: 193 AGGQ 196
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 135/180 (75%), Gaps = 8/180 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +++F+AFSLI K
Sbjct: 21 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNAIFKAFSLICKKF 80
Query: 61 EEFHKNQNKHLGGNGESQL----IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
EEF + Q+ G G + I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VA
Sbjct: 81 EEFQELQS----GGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA 136
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 176
S+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ AG L G Q
Sbjct: 137 SEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQVAGPVILAGGQ 196
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 100 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTSEAI 157
Query: 322 ALAQYLI 328
Y I
Sbjct: 158 TQCIYHI 164
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 100 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTSEAI 157
Query: 767 ALAQYLI 773
Y I
Sbjct: 158 TQCIYHI 164
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
+++HL + + + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 2 EDRHLLNDDPNITLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ER 58
Query: 127 EVNIKGVPDAVTQAIYQIC 145
V + G +A+ +A IC
Sbjct: 59 IVTVTGPTNAIFKAFSLIC 77
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 571
+++HL + + + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 2 EDRHLLNDDPNITLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ER 58
Query: 572 EVNIKGVPDAVTQAIYQIC 590
V + G +A+ +A IC
Sbjct: 59 IVTVTGPTNAIFKAFSLIC 77
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GYIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGYIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 156 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 209
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSSGGGSGNSGGFGGV----PQGP 428
L P L+A + S L L+ + S GF G+ P+
Sbjct: 210 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 268
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 269 GYWASLDASTQTTHELTIPNNLIGYIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 329 ITGSAASISLAQYLI 343
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 139/361 (38%), Positives = 203/361 (56%), Gaps = 50/361 (13%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK +REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVK-MREESGARINISEGNCPERIITLAGPTNAIFKA 70
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 71 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 129
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAG 613
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPY P P ++
Sbjct: 130 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYWPKPSSSP 189
Query: 614 GPGLIGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G + +Q + PD L L +
Sbjct: 190 VIFAGGQAYTIQGQYAIPQPD------------------------------LTKLHQLAM 219
Query: 673 KTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
+ +H P N + + + G + + E+T+PN+LIG +IG+ G KI
Sbjct: 220 QQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 279
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 789
EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E G
Sbjct: 280 NEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETG 329
Query: 790 G 790
G
Sbjct: 330 G 330
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 137/353 (38%), Positives = 199/353 (56%), Gaps = 50/353 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK +REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVK-MREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 78
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 79 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 137
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNAGGPGLIGNQ 176
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPY P P ++ G
Sbjct: 138 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYWPKPSSSPVIFAGGQA 197
Query: 177 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR- 234
+ +Q + PD L L ++ +H P
Sbjct: 198 YTIQGQYAIPQPD------------------------------LTKLHQLAMQQSHFPMT 227
Query: 235 --NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
N + + + G + + E+T+PN+LIG +IG+ G KI EIR++SG
Sbjct: 228 HGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 287
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
A I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 288 AQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 330
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 121/196 (61%), Positives = 142/196 (72%), Gaps = 9/196 (4%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+A
Sbjct: 16 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA 75
Query: 498 FSLITKNIEE----FHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIR 551
F+LI K EE FH Q GG G I LRLIVPASQCGS+IGKGGS+IK IR
Sbjct: 76 FTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIR 135
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN 611
E +GAS+ VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ
Sbjct: 136 EVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ- 194
Query: 612 AGGPGLI--GNQFGMQ 625
GGP ++ G + +Q
Sbjct: 195 VGGPVILAGGQAYTIQ 210
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 138/188 (73%), Gaps = 9/188 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+AF+LI K
Sbjct: 24 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKF 83
Query: 61 EE----FHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
EE FH Q GG G I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+
Sbjct: 84 EEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQ 143
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI- 173
VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++
Sbjct: 144 VASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPVILA 202
Query: 174 -GNQFGMQ 180
G + +Q
Sbjct: 203 GGQAYTIQ 210
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 81/119 (68%), Gaps = 20/119 (16%)
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 271
GGLN AALAALA SQL+T+ N N+ Q NN+ T EMTVPNE
Sbjct: 341 GGLNPAALAALAGSQLRTS------NTNRQQPAANNQ--------------THEMTVPNE 380
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLINM
Sbjct: 381 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLINM 439
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 81/119 (68%), Gaps = 20/119 (16%)
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
GGLN AALAALA SQL+T+ N N+ Q NN+ T EMTVPNE
Sbjct: 341 GGLNPAALAALAGSQLRTS------NTNRQQPAANNQ--------------THEMTVPNE 380
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLINM
Sbjct: 381 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLINM 439
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 109 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTSEAI 166
Query: 322 ALAQYLI 328
Y I
Sbjct: 167 TQCIYHI 173
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 109 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTSEAI 166
Query: 767 ALAQYLI 773
Y I
Sbjct: 167 TQCIYHI 173
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 68 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 127
NK + + S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 6 NKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 62
Query: 128 VNIKGVPDAVTQAIYQIC 145
V + G +++ +A IC
Sbjct: 63 VTVTGPTNSIFKAFTLIC 80
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 513 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 572
NK + + S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 6 NKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 62
Query: 573 VNIKGVPDAVTQAIYQIC 590
V + G +++ +A IC
Sbjct: 63 VTVTGPTNSIFKAFTLIC 80
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQA 140
+ VP G IIGKGG++I IR+ SGA + + + +T+R + I G PDAV A
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 141 IYQI 144
Y I
Sbjct: 434 QYLI 437
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQA 585
+ VP G IIGKGG++I IR+ SGA + + + +T+R + I G PDAV A
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 586 IYQI 589
Y I
Sbjct: 434 QYLI 437
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 1 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 60
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 61 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 119
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 120 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 179
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 180 DRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 220
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 221 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 280
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 281 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 325
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 446 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 505
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 1 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 60
Query: 506 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 565
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 61 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 119
Query: 566 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 615
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 120 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 179
Query: 616 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
+ G ++ D+ PL + G S L+ A K N
Sbjct: 180 DRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 220
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 726
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 221 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 280
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 281 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 325
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 79 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 136
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 137 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 190
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 191 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 249
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 250 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 309
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 310 ITGSAASISLAQYLI 324
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 208/356 (58%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IR+++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTE+ + I G+P +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTEQAITIAGMPQSVTECVKQICLVMLETISQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG N G ++ D+ PL + G ++ LA L
Sbjct: 191 PVICAGGQDRYSNTAGYPHA---THDLEGPPLDAYSIQG---------QHTISPLHLANL 238
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRN-----NRDGPSQK----TNQQQNQITKEMTVPNELI 718
N + R Q+ H + + P K + Q T E+T+PN LI
Sbjct: 239 -------NQVARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ GT I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGTNINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/348 (40%), Positives = 204/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IR+++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTE+ + I G+P +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTEQAITIAGMPQSVTECVKQICLVMLETISQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
N G ++ D+ PL + G ++ LA L N
Sbjct: 199 DRYSNTAGYPHA---THDLEGPPLDAYSIQG---------QHTISPLHLANL-------N 239
Query: 231 HMPRNQNQNQNQHNRN-----NRDGPSQK----TNQQQNQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H + + P K + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
T I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 TNINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 140/196 (71%), Gaps = 9/196 (4%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+A
Sbjct: 16 VTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA 75
Query: 498 FSLITKNIEE----FHK--NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
F+LI K EE FH GG I LRLIVPASQCGS+IGKGGS+IK IR
Sbjct: 76 FTLICKKFEEWCSQFHDVPGSGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIR 135
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN 611
E +GAS+ VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ
Sbjct: 136 EVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ- 194
Query: 612 AGGPGLI--GNQFGMQ 625
GGP ++ G + +Q
Sbjct: 195 VGGPVILAGGQAYTIQ 210
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 136/188 (72%), Gaps = 9/188 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE VK+ REESG+KI ISD S PERIVTV G +S+F+AF+LI K
Sbjct: 24 MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKF 83
Query: 61 EE----FHK--NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
EE FH GG I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+
Sbjct: 84 EEWCSQFHDVPGSGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQ 143
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI- 173
VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++
Sbjct: 144 VASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPVILA 202
Query: 174 -GNQFGMQ 180
G + +Q
Sbjct: 203 GGQAYTIQ 210
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 212/430 (49%), Gaps = 79/430 (18%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRA-FSLITKNI 60
+ GS+IGK G +K++RE +G+ I ++ P ER VT+ G+ +++ + + + +
Sbjct: 119 QCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVML 178
Query: 61 EEFHK------NQNKHLGG-----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
E K +GG G++ IQ VPA S + T+
Sbjct: 179 ESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAH----------SDVSTVLPLP 228
Query: 110 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG 169
+ L T P + A ++ + P P P +A
Sbjct: 229 APAAGPTPPSLNTQTLTTSPFAAHPSSSAFAASHGHPLLSTAHLTTPHHPLHPSPLHASV 288
Query: 170 PGLIGNQF---GMQNSLMGAP-------DMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 219
GL +Q +L A +G+NPLAGLAALGLGG + GGLN AAL
Sbjct: 289 AGLADPLLKSGHLQAALPPAHLVADAMGKLGSNPLAGLAALGLGGLATPANTGGLNPAAL 348
Query: 220 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 279
AALA SQL+TN N N+ Q NN+ T EMTVPNELIG +IGK
Sbjct: 349 AALAGSQLRTN------NTNRQQPAANNQ--------------THEMTVPNELIGCIIGK 388
Query: 280 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
GGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLINMSVEL +ANL
Sbjct: 389 GGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLINMSVELQKANL 448
Query: 340 NGEGGGESNMDDFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTKPG 388
+ P S G + ++PLA+A+P LAQ+L+KPG
Sbjct: 449 EAH------------NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSKPG 495
Query: 389 ALNALTSLSA 398
ALNAL+SL+A
Sbjct: 496 ALNALSSLTA 505
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 211/438 (48%), Gaps = 79/438 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRA- 497
+R I+ + GS+IGK G +K++RE +G+ I ++ P ER VT+ G+ +++ +
Sbjct: 111 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCI 170
Query: 498 FSLITKNIEEFHK------NQNKHLGG-----NGESQLIQLRLIVPASQCGSIIGKGGSQ 546
+ + +E K +GG G++ IQ VPA S
Sbjct: 171 YHICCVMLESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAH----------SD 220
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 606
+ T+ + L T P + A ++ + P
Sbjct: 221 VSTVLPLPAPAAGPTPPSLNTQTLTTSPFAAHPSSSAFAASHGHPLLSTAHLTTPHHPLH 280
Query: 607 PLPQNAGGPGLIGNQF---GMQNSLMGAP-------DMGNNPLAGLAALGLGGNSGGGMG 656
P P +A GL +Q +L A +G+NPLAGLAALGLGG +
Sbjct: 281 PSPLHASVAGLADPLLKSGHLQAALPPAHLVADAMGKLGSNPLAGLAALGLGGLATPANT 340
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
GGLN AALAALA SQL+TN N N+ Q NN+ T EMTVPNE
Sbjct: 341 GGLNPAALAALAGSQLRTN------NTNRQQPAANNQ--------------THEMTVPNE 380
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLINMS
Sbjct: 381 LIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLINMS 440
Query: 777 VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQL 825
VEL +ANL + P S G + ++PLA+A+P L
Sbjct: 441 VELQKANLEAH------------NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-L 487
Query: 826 AQILTKPAGLNASNPLAA 843
AQ+L+KP LNA + L A
Sbjct: 488 AQLLSKPGALNALSSLTA 505
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 109 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTSEAI 166
Query: 322 ALAQYLI 328
Y I
Sbjct: 167 TQCIYHI 173
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 109 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTSEAI 166
Query: 767 ALAQYLI 773
Y I
Sbjct: 167 TQCIYHI 173
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 68 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 127
NK + + S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 6 NKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 62
Query: 128 VNIKGVPDAVTQAIYQIC 145
V + G +++ +A IC
Sbjct: 63 VTVTGPTNSIFKAFTLIC 80
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 513 NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 572
NK + + S + +RLI+ + GSIIGK G +K RE SGA + ++ P ER
Sbjct: 6 NKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCP---ERI 62
Query: 573 VNIKGVPDAVTQAIYQIC 590
V + G +++ +A IC
Sbjct: 63 VTVTGPTNSIFKAFTLIC 80
>gi|444519891|gb|ELV12903.1| Poly(rC)-binding protein 3 [Tupaia chinensis]
Length = 300
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 180/310 (58%), Gaps = 48/310 (15%)
Query: 23 ESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQL 82
+SG++I IS+ + PERIVT+ G D++F+AF++I EE N + + + L
Sbjct: 23 KSGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPP-VTL 81
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
RL+VPASQCGS+IGKGGS+IK IRE++GA V VA DMLPNSTER V I G PDA+ Q +
Sbjct: 82 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 141
Query: 143 QICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFGMQNSL-MGAPDMGNNPLAGLAA 199
QIC++M++SPPKGATIPYRP P A P + G + +Q + PD L L
Sbjct: 142 QICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYTIQGQYAIPHPDQ----LTKLHQ 195
Query: 200 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ 259
L + +G A L +S + H
Sbjct: 196 LAMQQTPFPPLGQ--TNPAFPGLDASPPASTH---------------------------- 225
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP
Sbjct: 226 -----ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPA 277
Query: 320 AIALAQYLIN 329
I+LAQYLIN
Sbjct: 278 NISLAQYLIN 287
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 180/310 (58%), Gaps = 48/310 (15%)
Query: 468 ESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQL 527
+SG++I IS+ + PERIVT+ G D++F+AF++I EE N + + + L
Sbjct: 23 KSGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPP-VTL 81
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
RL+VPASQCGS+IGKGGS+IK IRE++GA V VA DMLPNSTER V I G PDA+ Q +
Sbjct: 82 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVK 141
Query: 588 QICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFGMQNSL-MGAPDMGNNPLAGLAA 644
QIC++M++SPPKGATIPYRP P A P + G + +Q + PD L L
Sbjct: 142 QICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYTIQGQYAIPHPDQ----LTKLHQ 195
Query: 645 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ 704
L + +G A L +S + H
Sbjct: 196 LAMQQTPFPPLGQ--TNPAFPGLDASPPASTH---------------------------- 225
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP
Sbjct: 226 -----ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPA 277
Query: 765 AIALAQYLIN 774
I+LAQYLIN
Sbjct: 278 NISLAQYLIN 287
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK G +K++RE +G+++ ++ P ER VT+ G+ D++ +
Sbjct: 81 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 140
Query: 499 SLIT 502
I
Sbjct: 141 KQIC 144
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 203/354 (57%), Gaps = 40/354 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M KEVGSIIGK GE+ K+ R+ESG++I IS+ + PERI+T+ G +++F+AF +I
Sbjct: 16 IRLLMHRKEVGSIIGKKGESPKRFRKESGARINISEGNCPERIITLTGPTNAIFKAFVMI 75
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE N + + LRL+VPA QCGS+IGKGG +IK IRE++GA V VA
Sbjct: 76 IDKLEE-DINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGAQVQVA 134
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN----- 611
DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 135 GDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVIC 194
Query: 612 AGGPGLIGNQFGMQNSLMGAPDMGNNPLAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
AGG G G ++ G P + L G L A + G + + LA
Sbjct: 195 AGGQDRWGYAAGYPHA-AGYPH-DTHYLEGPPLDAYSIQGQ---------HTVSPLDLA- 242
Query: 670 SQLKTNHMPRNQNQNQNQHNRN-----NRDGPSQK----TNQQQNQITKEMTVPNELIGA 720
K N + R Q+ H + + P K + Q T E T+PN LIG
Sbjct: 243 ---KLNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLDASTQTTHEFTIPNNLIGC 299
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 IIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 350
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 200/350 (57%), Gaps = 40/350 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M KEVGSIIGK GE+ K+ R+ESG++I IS+ + PERI+T+ G +++F+AF +I +
Sbjct: 20 MHRKEVGSIIGKKGESPKRFRKESGARINISEGNCPERIITLTGPTNAIFKAFVMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
G G ++ G P + L G L A + G + + LA K
Sbjct: 199 DRWGYAAGYPHA-AGYPH-DTHYLEGPPLDAYSIQGQ---------HTVSPLDLA----K 243
Query: 229 TNHMPRNQNQNQNQHNRN-----NRDGPSQK----TNQQQNQITKEMTVPNELIGAVIGK 279
N + R Q+ H + + P K + Q T E T+PN LIG +IG+
Sbjct: 244 LNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLDASTQTTHEFTIPNNLIGCIIGR 303
Query: 280 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 304 QGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 350
>gi|426249910|ref|XP_004018689.1| PREDICTED: poly(rC)-binding protein 4 [Ovis aries]
Length = 425
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 194/359 (54%), Gaps = 54/359 (15%)
Query: 15 ETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN 74
ETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I ++E + GGN
Sbjct: 60 ETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGN 118
Query: 75 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 134
+ LRL++PASQCGS+IGK G++IK IRET+GA V VA D+LPNSTER V + GVP
Sbjct: 119 VSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVP 178
Query: 135 DAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPL 194
DA+ + QIC ++++SPPKGATIPY P SL
Sbjct: 179 DAIILCVRQICAVILESPPKGATIPYHP-------------------SL----------- 208
Query: 195 AGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQNQNQHNRNNRDGPSQ 253
L + L N G + G A A + Q + H +P + PS
Sbjct: 209 -SLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLD------PST 261
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 313
+T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T
Sbjct: 262 QTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVT 312
Query: 314 MTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
+TG+P +IALAQYLI +E ++ G G +D P S PL L + P
Sbjct: 313 ITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDLPAPFSPPLTALPTAPP 365
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 194/359 (54%), Gaps = 54/359 (15%)
Query: 460 ETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN 519
ETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I ++E + GGN
Sbjct: 60 ETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGN 118
Query: 520 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 579
+ LRL++PASQCGS+IGK G++IK IRET+GA V VA D+LPNSTER V + GVP
Sbjct: 119 VSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVP 178
Query: 580 DAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPL 639
DA+ + QIC ++++SPPKGATIPY P SL
Sbjct: 179 DAIILCVRQICAVILESPPKGATIPYHP-------------------SL----------- 208
Query: 640 AGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQNQNQHNRNNRDGPSQ 698
L + L N G + G A A + Q + H +P + PS
Sbjct: 209 -SLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLD------PST 261
Query: 699 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 758
+T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T
Sbjct: 262 QTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVT 312
Query: 759 MTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+TG+P +IALAQYLI +E ++ G G +D P S PL L + P
Sbjct: 313 ITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDLPAPFSPPLTALPTAPP 365
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 100/252 (39%), Gaps = 72/252 (28%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 126 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 185
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 186 RQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHA 245
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 246 VPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 304
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRP----LPQNA 612
+ ER V I G P ++ A Y I CL S P P+ P LP
Sbjct: 305 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSPPLTALP--T 362
Query: 613 GGPGLIGNQFGM 624
PGL+G + +
Sbjct: 363 APPGLLGTPYAI 374
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 72/244 (29%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I I
Sbjct: 134 QCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVIL 193
Query: 62 E---------FHKN---------QNKHLGGNGE---------SQLIQL------------ 82
E +H + N+ G+ ++L QL
Sbjct: 194 ESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 253
Query: 83 -------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+VP G +IG+ GS+I IR+ SGA + + + + ER V
Sbjct: 254 VPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVT 312
Query: 130 IKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRP----LPQNAGGPGLIGN 175
I G P ++ A Y I CL S P P+ P LP PGL+G
Sbjct: 313 ITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSPPLTALP--TAPPGLLGT 370
Query: 176 QFGM 179
+ +
Sbjct: 371 PYAI 374
>gi|281341834|gb|EFB17418.1| hypothetical protein PANDA_012445 [Ailuropoda melanoleuca]
Length = 320
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 191/330 (57%), Gaps = 22/330 (6%)
Query: 12 KSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHL 71
+ GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +EE + +
Sbjct: 1 QKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNS 60
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
+ LRL+VPASQCGS+IGKGG +IK IRE GA V VA DMLPNSTER + I
Sbjct: 61 TAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIREV-GAQVQVAGDMLPNSTERAITIA 118
Query: 132 GVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGNQFGMQNSLMGA 186
G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG +
Sbjct: 119 GIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTT 178
Query: 187 PDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR---NQNQNQ 240
P M NP L G L A + G + L L ++ +H P N +
Sbjct: 179 PSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 232
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ + G + + E+T+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 233 IESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 292
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINM 330
E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 293 V---EGSTDRQVTITGSAASISLAQYLINV 319
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 191/330 (57%), Gaps = 22/330 (6%)
Query: 457 KSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHL 516
+ GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +EE + +
Sbjct: 1 QKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNS 60
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+ LRL+VPASQCGS+IGKGG +IK IRE GA V VA DMLPNSTER + I
Sbjct: 61 TAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIREV-GAQVQVAGDMLPNSTERAITIA 118
Query: 577 GVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGNQFGMQNSLMGA 631
G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG +
Sbjct: 119 GIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTT 178
Query: 632 PDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR---NQNQNQ 685
P M NP L G L A + G + L L ++ +H P N +
Sbjct: 179 PSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 232
Query: 686 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 745
+ + G + + E+T+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 233 IESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 292
Query: 746 SEEEEDSNDRTITMTGTPDAIALAQYLINM 775
E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 293 V---EGSTDRQVTITGSAASISLAQYLINV 319
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 40/265 (15%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR++ GA +++ + + +S +R IT+ G P +I
Sbjct: 68 VTLRLVVPASQCGSLIGKGGCKIKEIREV-GAQVQV--AGDMLPNSTERAITIAGIPQSI 124
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
+ + + V +L + G GG+ S + P + P
Sbjct: 125 --IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMC 182
Query: 367 LNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG 423
LN PL A Q + +P LT L L + G +G SG
Sbjct: 183 LNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIESS 236
Query: 424 VPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD- 477
P+ Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I I++
Sbjct: 237 SPEVKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIANP 292
Query: 478 -SSTPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 293 VEGSTDRQVTITGSAASISLAQYLI 317
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 202/356 (56%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK+ E+VK++REESG++ IS+ + PERI+T+ G ++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSISEGNCPERIITLTGPTCAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F+++ +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMMINKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT-----IPYRPLPQN- 611
V V+ DMLPNSTE+ + + VP +VT+ + QICL+M+++ P+ IPY+P+P +
Sbjct: 131 VQVSGDMLPNSTEQAITVAVVPQSVTECVQQICLVMLETLPQCPQGRVMPIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+G PL + G ++ LA
Sbjct: 191 PVTCAGGQDRGSDAAGYPHATR---DLGVPPLDACSTQG---------QHTISPLHLA-- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHIAMLHGGTGFAGIESSSPEVKGYRASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGVNINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 198/348 (56%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK+ E+VK++REESG++ IS+ + PERI+T+ G ++F+AF+++ +
Sbjct: 20 MHGKEVGSIIGKNEESVKRIREESGARFSISEGNCPERIITLTGPTCAIFKAFAMMINKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V V+ DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVSGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT-----IPYRPLPQN-----AGGP 170
PNSTE+ + + VP +VT+ + QICL+M+++ P+ IPY+P+P + AGG
Sbjct: 139 PNSTEQAITVAVVPQSVTECVQQICLVMLETLPQCPQGRVMPIPYQPMPASSPVTCAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+G PL + G ++ LA K N
Sbjct: 199 DRGSDAAGYPHATR---DLGVPPLDACSTQG---------QHTISPLHLA-------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHIAMLHGGTGFAGIESSSPEVKGYRASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 VNINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 193/338 (57%), Gaps = 45/338 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKE+GSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS D++FRA S+I
Sbjct: 25 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTDAVFRAVSMI 84
Query: 502 TKNIEEFHKNQNKHLGGNGES---QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+EE + G +G + + LRL++PASQCGS+IGK G++I+ IRE++GA V
Sbjct: 85 AFKLEE-----DLGAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQV 139
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG--PG 616
VA D+LPNSTER V + GVPD + + QIC ++++ P + T + P G P
Sbjct: 140 QVAGDLLPNSTERAVTVSGVPDTIIHCVRQICAVILEVPTESPTQAWGAFPHQHGYLPPK 199
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
+ + +P NP +G + M +A + + L +
Sbjct: 200 MTLSLISWSPCTHQSPP---NP-------AVGKHWHPIM---TDAYSYWRPTTPLLTSLS 246
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
+P P T+ Q + ++E VPN+LIG +IG+ G+KI EIR++S
Sbjct: 247 LP-----------------PGLDTSSQNS--SQEFLVPNDLIGCIIGRHGSKISEIRQMS 287
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
GA I+I + E S++R +T+TG+P +I +AQYLI
Sbjct: 288 GAHIKIGN---QTEGSSERHVTITGSPVSITVAQYLIT 322
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 190/334 (56%), Gaps = 45/334 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKE+GSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS D++FRA S+I +
Sbjct: 29 MHGKEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTDAVFRAVSMIAFKL 88
Query: 61 EEFHKNQNKHLGGNGES---QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
EE + G +G + + LRL++PASQCGS+IGK G++I+ IRE++GA V VA
Sbjct: 89 EE-----DLGAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAG 143
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG--PGLIGN 175
D+LPNSTER V + GVPD + + QIC ++++ P + T + P G P + +
Sbjct: 144 DLLPNSTERAVTVSGVPDTIIHCVRQICAVILEVPTESPTQAWGAFPHQHGYLPPKMTLS 203
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+P NP +G + M +A + + L + +P
Sbjct: 204 LISWSPCTHQSPP---NP-------AVGKHWHPIM---TDAYSYWRPTTPLLTSLSLP-- 248
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
P T+ Q + ++E VPN+LIG +IG+ G+KI EIR++SGA I
Sbjct: 249 ---------------PGLDTSSQNS--SQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHI 291
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+I + E S++R +T+TG+P +I +AQYLI
Sbjct: 292 KIGN---QTEGSSERHVTITGSPVSITVAQYLIT 322
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G DAV +
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTDAVFR 79
Query: 140 AIYQICL 146
A+ I
Sbjct: 80 AVSMIAF 86
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G DAV +
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTDAVFR 79
Query: 585 AIYQICL 591
A+ I
Sbjct: 80 AVSMIAF 86
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 130/188 (69%), Gaps = 11/188 (5%)
Query: 432 NIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSM 491
++ T V +R IMQGKEVGSIIGK G+ +KK RE+SG+KI ISD + PERIVTV GS
Sbjct: 4 SVNTPSVTLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCPERIVTVTGST 63
Query: 492 DSLFRAFSLITKNIEEFHK----------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+ + +AFSLI EE N K L G + LRLIVPASQCGS+IG
Sbjct: 64 ECILKAFSLICAKFEEMSSLSGSPTESALNGQKVLPGQTPPP-VTLRLIVPASQCGSLIG 122
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
K GS+I+ IRE +GASV VAS+MLPNSTER V + G DAVT+ IYQIC +M++ PPKGA
Sbjct: 123 KAGSKIREIREITGASVQVASEMLPNSTERTVTVAGTADAVTKCIYQICCVMLECPPKGA 182
Query: 602 TIPYRPLP 609
TIPYRP P
Sbjct: 183 TIPYRPKP 190
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 123/174 (70%), Gaps = 11/174 (6%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK G+ +KK RE+SG+KI ISD + PERIVTV GS + + +AFSLI
Sbjct: 18 MQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCPERIVTVTGSTECILKAFSLICAKF 77
Query: 61 EEFHK----------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
EE N K L G + LRLIVPASQCGS+IGK GS+I+ IRE +G
Sbjct: 78 EEMSSLSGSPTESALNGQKVLPGQTPPP-VTLRLIVPASQCGSLIGKAGSKIREIREITG 136
Query: 111 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
ASV VAS+MLPNSTER V + G DAVT+ IYQIC +M++ PPKGATIPYRP P
Sbjct: 137 ASVQVASEMLPNSTERTVTVAGTADAVTKCIYQICCVMLECPPKGATIPYRPKP 190
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T+EM +PN+LIG VIGKGG KI EIR++SGA I+IS + EE S +R ++++GTP+AI
Sbjct: 306 TQEMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISST---EEGSKERCVSISGTPEAIN 362
Query: 323 LAQYLINMSVELLR 336
LAQYLIN LR
Sbjct: 363 LAQYLINTRQVSLR 376
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T+EM +PN+LIG VIGKGG KI EIR++SGA I+IS + EE S +R ++++GTP+AI
Sbjct: 306 TQEMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISST---EEGSKERCVSISGTPEAIN 362
Query: 768 LAQYLINMSVELLR 781
LAQYLIN LR
Sbjct: 363 LAQYLINTRQVSLR 376
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGK G+KI EIR+I+GA +++ +SE +S +RT+T+ GT DA+
Sbjct: 106 VTLRLIVPASQCGSLIGKAGSKIREIREITGASVQV--ASEMLPNSTERTVTVAGTADAV 163
Query: 322 ALAQYLI 328
Y I
Sbjct: 164 TKCIYQI 170
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGK G+KI EIR+I+GA +++ +SE +S +RT+T+ GT DA+
Sbjct: 106 VTLRLIVPASQCGSLIGKAGSKIREIREITGASVQV--ASEMLPNSTERTVTVAGTADAV 163
Query: 767 ALAQYLI 773
Y I
Sbjct: 164 TKCIYQI 170
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
N S + +R+I+ + GSIIGK G IK RE SGA + ++ P ER V + G
Sbjct: 6 NTPSVTLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCP---ERIVTVTGS 62
Query: 134 PDAVTQAIYQIC 145
+ + +A IC
Sbjct: 63 TECILKAFSLIC 74
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
+P G +IGKGG +I IR+ SGA++ ++S S ER V+I G P+A+ A Y I
Sbjct: 311 IPNDLIGCVIGKGGQKINEIRQLSGATIKISSTE-EGSKERCVSISGTPEAINLAQYLI 368
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+P G +IGKGG +I IR+ SGA++ ++S S ER V+I G P+A+ A Y I
Sbjct: 311 IPNDLIGCVIGKGGQKINEIRQLSGATIKISSTE-EGSKERCVSISGTPEAINLAQYLI 368
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIVNSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 182
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 125/164 (76%), Gaps = 1/164 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIVNSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 182
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 341
Query: 323 LAQYLIN 329
LAQYLIN
Sbjct: 342 LAQYLIN 348
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 341
Query: 768 LAQYLIN 774
LAQYLIN
Sbjct: 342 LAQYLIN 348
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 46/268 (17%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
Q + + V +L + G GG+ D ++ S+A L+
Sbjct: 156 --IQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAA-----STANLSL 208
Query: 367 LNASNPLAAALPQLAQILTKPG--ALNAL----TSLSALGGLSDLLGG-----GSSGGGS 415
L PL A Q + P L+ L T LG + G SS
Sbjct: 209 LLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQANPAFPGEKLPLHSSEEAQ 268
Query: 416 GNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI 475
G G+ P + + T + +G IIG+ G + ++R+ SG++I I
Sbjct: 269 NLMGQSSGLDASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Query: 476 SDSS--TPERIVTVIGSMDSLFRAFSLI 501
++++ + ER +T+ G+ ++ A LI
Sbjct: 320 ANATEGSSERQITITGTPANISLAQYLI 347
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA---GLNASNPLAAALP 823
Q + + V +L + G P+S P+ G ++PLAA+
Sbjct: 156 --IQCVKQICVVMLESPPKGAT---------IPYRPKPASTPVIFAGGQVRADPLAASTA 204
Query: 824 QLAQILTKP 832
L+ +L P
Sbjct: 205 NLSLLLQHP 213
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I G P ++ A Y
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISLAQY 345
Query: 143 QI 144
I
Sbjct: 346 LI 347
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I G P ++ A Y
Sbjct: 287 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISLAQY 345
Query: 588 QI 589
I
Sbjct: 346 LI 347
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 131/175 (74%), Gaps = 1/175 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 612
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P +A
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 185
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 127/167 (76%), Gaps = 1/167 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P +A
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 185
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S T + +T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNG 341
+T++GTPDAI Q + + V +L + G
Sbjct: 146 VTISGTPDAI--IQCVKQICVVMLESPPKG 173
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S T + +T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNG 786
+T++GTPDAI Q + + V +L + G
Sbjct: 146 VTISGTPDAI--IQCVKQICVVMLESPPKG 173
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 199/355 (56%), Gaps = 79/355 (22%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP-YRPLPQNAGGPG 616
V VA DMLPNSTER + I G+P ++ + + QIC++M+++ TI +PQ P
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLEA----YTIQGQYAIPQ----PD 182
Query: 617 LIG-NQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
L +Q MQ S + P+ GN+ G GL+A+A T+
Sbjct: 183 LTKLHQLAMQQS--------HFPMT-------HGNT--GFSAGLDASAQT--------TS 217
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
H E+T+PN+LIG +IG+ G KI EIR++
Sbjct: 218 H---------------------------------ELTIPNDLIGCIIGRQGAKINEIRQM 244
Query: 736 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 245 SGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 289
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 195/347 (56%), Gaps = 79/347 (22%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP-YRPLPQNAGGPGLIG-NQFG 178
PNSTER + I G+P ++ + + QIC++M+++ TI +PQ P L +Q
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLEA----YTIQGQYAIPQ----PDLTKLHQLA 190
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
MQ S + P+ GN+ G GL+A+A T+H
Sbjct: 191 MQQS--------HFPMT-------HGNT--GFSAGLDASAQT--------TSH------- 218
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
E+T+PN+LIG +IG+ G KI EIR++SGA I+I+
Sbjct: 219 --------------------------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 252
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 253 NPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 289
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 182
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 125/164 (76%), Gaps = 1/164 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 182
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA---GLNASNPLAAALP 378
Q + + V +L + G P+S P+ G ++PLAA+
Sbjct: 156 --IQCVKQICVVMLESPPKGAT---------IPYRPKPASTPVIFAGGQVRADPLAASTA 204
Query: 379 QLAQILTKP 387
L+ +L P
Sbjct: 205 NLSLLLQHP 213
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA---GLNASNPLAAALP 823
Q + + V +L + G P+S P+ G ++PLAA+
Sbjct: 156 --IQCVKQICVVMLESPPKGAT---------IPYRPKPASTPVIFAGGQVRADPLAASTA 204
Query: 824 QLAQILTKP 832
L+ +L P
Sbjct: 205 NLSLLLQHP 213
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 182
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 125/164 (76%), Gaps = 1/164 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 182
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S T + +T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNG 341
+T++GTPDAI Q + + V +L + G
Sbjct: 146 VTISGTPDAI--IQCVKQICVVMLESPPKG 173
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S T + +T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERA 145
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNG 786
+T++GTPDAI Q + + V +L + G
Sbjct: 146 VTISGTPDAI--IQCVKQICVVMLESPPKG 173
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 128/168 (76%), Gaps = 1/168 (0%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMI 107
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA
Sbjct: 108 AYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA 166
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 167 GDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 214
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 125/164 (76%), Gaps = 1/164 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 214
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 322 ALAQYLINMSVELLRANLNG 341
Q + + V +L + G
Sbjct: 188 --IQCVKQICVVMLESPPKG 205
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 767 ALAQYLINMSVELLRANLNG 786
Q + + V +L + G
Sbjct: 188 --IQCVKQICVVMLESPPKG 205
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 142/209 (67%), Gaps = 2/209 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++G+
Sbjct: 72 FAMIAYKFEEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P +A
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAPVIFA 190
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAAL 645
G + +Q + PD + P L L
Sbjct: 191 GGQAYSIQGQYAIPHPDEKSCPYILLKKL 219
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 138/201 (68%), Gaps = 2/201 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++G+ V VA DML
Sbjct: 80 EEDIINSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P +A G + +Q
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAPVIFAGGQAYSIQ 198
Query: 181 NSL-MGAPDMGNNPLAGLAAL 200
+ PD + P L L
Sbjct: 199 GQYAIPHPDEKSCPYILLKKL 219
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S T + +T + VP G++IGKGG+KI EIR+ +G+ +++ + + +S +R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQV--AGDMLPNSTERA 145
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNG 341
+T++GTPDAI Q + + V +L + G
Sbjct: 146 VTISGTPDAI--IQCVKQICVVMLESPPKG 173
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S T + +T + VP G++IGKGG+KI EIR+ +G+ +++ + + +S +R
Sbjct: 88 SNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQV--AGDMLPNSTERA 145
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNG 786
+T++GTPDAI Q + + V +L + G
Sbjct: 146 VTISGTPDAI--IQCVKQICVVMLESPPKG 173
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 54 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 113
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 114 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 172
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 173 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 224
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 125/164 (76%), Gaps = 1/164 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 62 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 121
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 122 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 180
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 181 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 224
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 271 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 327
Query: 323 LAQYLIN 329
LAQYLIN
Sbjct: 328 LAQYLIN 334
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 271 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 327
Query: 768 LAQYLIN 774
LAQYLIN
Sbjct: 328 LAQYLIN 334
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK G +K++RE +G+++ ++ P ER VT+ G+ D++ +
Sbjct: 142 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 201
Query: 499 SLITKNIEE--------------------F---------------HKNQNKHLGGNGESQ 523
I + E F H + + H S
Sbjct: 202 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDVSFHFVCLPFSS 261
Query: 524 LIQL-------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+ L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I
Sbjct: 262 CLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITIT 320
Query: 577 GVPDAVTQAIYQI 589
G P ++ A Y I
Sbjct: 321 GTPANISLAQYLI 333
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 46/185 (24%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK G +K++RE +G+++ ++ P ER VT+ G+ D++ + I +
Sbjct: 150 QCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVML 209
Query: 62 E--------------------F---------------HKNQNKHLGGNGESQLIQL---- 82
E F H + + H S +
Sbjct: 210 ESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDVSFHFVCLPFSSCLDASPPA 269
Query: 83 ---RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I G P ++
Sbjct: 270 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISL 328
Query: 140 AIYQI 144
A Y I
Sbjct: 329 AQYLI 333
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 140 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 197
Query: 322 ALAQYLINMSVELLRANLNG 341
Q + + V +L + G
Sbjct: 198 --IQCVKQICVVMLESPPKG 215
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 140 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 197
Query: 767 ALAQYLINMSVELLRANLNG 786
Q + + V +L + G
Sbjct: 198 --IQCVKQICVVMLESPPKG 215
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 63 FHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
F + H G ES++ + +RL++ + GSIIGK G +K +RE SGA +
Sbjct: 31 FSHHLQTHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARIN 90
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
++ N ER V I G DA+ +A I
Sbjct: 91 ISEG---NCPERIVTITGPTDAIFKAFAMI 117
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 508 FHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
F + H G ES++ + +RL++ + GSIIGK G +K +RE SGA +
Sbjct: 31 FSHHLQTHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARIN 90
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
++ N ER V I G DA+ +A I
Sbjct: 91 ISEG---NCPERIVTITGPTDAIFKAFAMI 117
>gi|354475601|ref|XP_003500016.1| PREDICTED: poly(rC)-binding protein 2-like [Cricetulus griseus]
Length = 325
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 134/346 (38%), Positives = 189/346 (54%), Gaps = 55/346 (15%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLIT 502
R +M GKEVGSII K GE+VKK+REESG++ ISD + PERI+T+ G +++F+AF++I
Sbjct: 17 RLLMHGKEVGSIIAKKGESVKKMREESGARTSISDGNCPERIITLAGPTNAIFKAFAMII 76
Query: 503 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 562
+EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA
Sbjct: 77 DKLEEGISSSMTNSTAASRPP-VALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG 135
Query: 563 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGATIPYRPLPQN---- 611
DMLPNSTE + I G+P ++ + + QIC++M+++ PKG TI YRP P +
Sbjct: 136 DMLPNSTEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHPKGLTITYRPKPSSSLVI 195
Query: 612 -AGG-----PGLIGNQF-GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
AGG G F S+ PD+ PL L
Sbjct: 196 FAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPL-----------------------EL 232
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
L L+ +H P N D +Q T+ E+T+ N+LIG +IG+
Sbjct: 233 TKLHQLALQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTISNDLIGCIIGR 282
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
G KI EIR++SGA I K++ E S DR +T+TG+ +I+L Q
Sbjct: 283 QGAKINEIRQMSGAQI---KTANPVEGSTDRQVTITGSAASISLPQ 325
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 187/343 (54%), Gaps = 55/343 (16%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSII K GE+VKK+REESG++ ISD + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIAKKGESVKKMREESGARTSISDGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEGISSSMTNSTAASRPP-VALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGATIPYRPLPQN-----AG 168
PNSTE + I G+P ++ + + QIC++M+++ PKG TI YRP P + AG
Sbjct: 139 PNSTEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHPKGLTITYRPKPSSSLVIFAG 198
Query: 169 G-----PGLIGNQF-GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 222
G G F S+ PD+ PL L L
Sbjct: 199 GQDRYSTGSDSASFPHTTQSMCLNPDLEGPPL-----------------------ELTKL 235
Query: 223 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 282
L+ +H P N D +Q T+ E+T+ N+LIG +IG+ G
Sbjct: 236 HQLALQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTISNDLIGCIIGRQGA 285
Query: 283 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
KI EIR++SGA I K++ E S DR +T+TG+ +I+L Q
Sbjct: 286 KINEIRQMSGAQI---KTANPVEGSTDRQVTITGSAASISLPQ 325
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 14 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKA 73
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA
Sbjct: 74 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQ 132
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
V VA DMLPNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 133 VQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP 184
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 125/164 (76%), Gaps = 1/164 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 22 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFAMIAYKF 81
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA V VA DML
Sbjct: 82 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDML 140
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
PNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 141 PNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP 184
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ + E S++R IT+TGTP I+
Sbjct: 267 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM---EGSSERQITITGTPANIS 323
Query: 323 LAQYLIN 329
LAQYLIN
Sbjct: 324 LAQYLIN 330
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ + E S++R IT+TGTP I+
Sbjct: 267 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM---EGSSERQITITGTPANIS 323
Query: 768 LAQYLIN 774
LAQYLIN
Sbjct: 324 LAQYLIN 330
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI E+R+ +GA +++ + + +S +R +T++GTP+AI
Sbjct: 100 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNSTERAVTISGTPEAI 157
Query: 322 ALAQYLINMSVELLRANLNG 341
Q + + V +L + G
Sbjct: 158 --IQCVKQICVVMLESPPKG 175
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI E+R+ +GA +++ + + +S +R +T++GTP+AI
Sbjct: 100 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNSTERAVTISGTPEAI 157
Query: 767 ALAQYLINMSVELLRANLNG 786
Q + + V +L + G
Sbjct: 158 --IQCVKQICVVMLESPPKG 175
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
L +P G IIG+ G++I IR+ SGA + +A+ M S+ER++ I G P ++ A Y
Sbjct: 269 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM-EGSSERQITITGTPANISLAQY 327
Query: 143 QI 144
I
Sbjct: 328 LI 329
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
L +P G IIG+ G++I IR+ SGA + +A+ M S+ER++ I G P ++ A Y
Sbjct: 269 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM-EGSSERQITITGTPANISLAQY 327
Query: 588 QI 589
I
Sbjct: 328 LI 329
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G D + +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDTIFK 72
Query: 140 AIYQI 144
A I
Sbjct: 73 AFAMI 77
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 134/182 (73%), Gaps = 4/182 (2%)
Query: 431 ANIQTTG---VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV 487
+ +Q+ G V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+
Sbjct: 4 SKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTI 63
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
G D++F+AF++I EE N + + + LRL+VPASQCGS+IGKGGS+I
Sbjct: 64 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKI 122
Query: 548 KTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
K +RE++GA V VA DMLPNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP
Sbjct: 123 KEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRP 182
Query: 608 LP 609
P
Sbjct: 183 KP 184
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 125/164 (76%), Gaps = 1/164 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 22 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 81
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE++GA V VA DML
Sbjct: 82 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDML 140
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
PNSTER V I G P+A+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 141 PNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP 184
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 24/140 (17%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI E+R+ +GA +++ + + +S +R +T++GTP+AI
Sbjct: 100 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNSTERAVTISGTPEAI 157
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
Q + + V +L + G GG+ D ++ S+A L+
Sbjct: 158 --IQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAA-----SAANLSL 210
Query: 367 LNASNPLAAALPQLAQILTK 386
L PL + + + +LT+
Sbjct: 211 LLQHQPLPVSSLRFSHLLTR 230
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 24/140 (17%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI E+R+ +GA +++ + + +S +R +T++GTP+AI
Sbjct: 100 VTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV--AGDMLPNSTERAVTISGTPEAI 157
Query: 767 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 811
Q + + V +L + G GG+ D ++ S+A L+
Sbjct: 158 --IQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADPLAA-----SAANLSL 210
Query: 812 LNASNPLAAALPQLAQILTK 831
L PL + + + +LT+
Sbjct: 211 LLQHQPLPVSSLRFSHLLTR 230
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 72
Query: 140 AIYQI 144
A I
Sbjct: 73 AFAMI 77
>gi|344250764|gb|EGW06868.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 187/343 (54%), Gaps = 55/343 (16%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSII K GE+VKK+REESG++ ISD + PERI+T+ G +++F+AF++I +
Sbjct: 1 MHGKEVGSIIAKKGESVKKMREESGARTSISDGNCPERIITLAGPTNAIFKAFAMIIDKL 60
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 61 EEGISSSMTNSTAASRPP-VALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 119
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGATIPYRPLPQN-----AG 168
PNSTE + I G+P ++ + + QIC++M+++ PKG TI YRP P + AG
Sbjct: 120 PNSTEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHPKGLTITYRPKPSSSLVIFAG 179
Query: 169 G-----PGLIGNQF-GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 222
G G F S+ PD+ PL L L
Sbjct: 180 GQDRYSTGSDSASFPHTTQSMCLNPDLEGPPL-----------------------ELTKL 216
Query: 223 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 282
L+ +H P N D +Q T+ E+T+ N+LIG +IG+ G
Sbjct: 217 HQLALQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTISNDLIGCIIGRQGA 266
Query: 283 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
KI EIR++SGA I K++ E S DR +T+TG+ +I+L Q
Sbjct: 267 KINEIRQMSGAQI---KTANPVEGSTDRQVTITGSAASISLPQ 306
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 187/343 (54%), Gaps = 55/343 (16%)
Query: 446 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 505
M GKEVGSII K GE+VKK+REESG++ ISD + PERI+T+ G +++F+AF++I +
Sbjct: 1 MHGKEVGSIIAKKGESVKKMREESGARTSISDGNCPERIITLAGPTNAIFKAFAMIIDKL 60
Query: 506 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 565
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 61 EEGISSSMTNSTAASRPP-VALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 119
Query: 566 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGATIPYRPLPQN-----AG 613
PNSTE + I G+P ++ + + QIC++M+++ PKG TI YRP P + AG
Sbjct: 120 PNSTEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHPKGLTITYRPKPSSSLVIFAG 179
Query: 614 G-----PGLIGNQF-GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
G G F S+ PD+ PL L L
Sbjct: 180 GQDRYSTGSDSASFPHTTQSMCLNPDLEGPPL-----------------------ELTKL 216
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 727
L+ +H P N D +Q T+ E+T+ N+LIG +IG+ G
Sbjct: 217 HQLALQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTISNDLIGCIIGRQGA 266
Query: 728 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
KI EIR++SGA I K++ E S DR +T+TG+ +I+L Q
Sbjct: 267 KINEIRQMSGAQI---KTANPVEGSTDRQVTITGSAASISLPQ 306
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 193/339 (56%), Gaps = 42/339 (12%)
Query: 10 IGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNK 69
+G+ G +VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +EE N +
Sbjct: 111 LGRKGTSVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLEE-DINSSM 169
Query: 70 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+ LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DMLPNSTER +
Sbjct: 170 TNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAIT 229
Query: 130 IKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGPGLIGNQFGM 179
I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG + G
Sbjct: 230 IAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGY 289
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
++ D+ PL + G S L+ A L N + R Q+
Sbjct: 290 PHATH---DLEGPPLDAYSIQGQHTIS------PLDLAKL----------NQVARQQSHF 330
Query: 240 QNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
H G + + + Q T E+T+PN LIG +IG+ G I EIR++
Sbjct: 331 AMLHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQM 390
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 391 SGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 426
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 193/339 (56%), Gaps = 42/339 (12%)
Query: 455 IGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNK 514
+G+ G +VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +EE N +
Sbjct: 111 LGRKGTSVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLEE-DINSSM 169
Query: 515 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
+ LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DMLPNSTER +
Sbjct: 170 TNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAIT 229
Query: 575 IKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGPGLIGNQFGM 624
I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG + G
Sbjct: 230 IAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGY 289
Query: 625 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 684
++ D+ PL + G S L+ A L N + R Q+
Sbjct: 290 PHATH---DLEGPPLDAYSIQGQHTIS------PLDLAKL----------NQVARQQSHF 330
Query: 685 QNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
H G + + + Q T E+T+PN LIG +IG+ G I EIR++
Sbjct: 331 AMLHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQM 390
Query: 736 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 391 SGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 426
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 109/265 (41%), Gaps = 44/265 (16%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 180 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 237
Query: 322 --ALAQYLINMSVELLRANLNGE-----------------GGGESNMDDFSSDNNLPSSA 362
+ Q + M +E L + G GG+ D +
Sbjct: 238 TECVKQICLVM-LETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDA-------AGY 289
Query: 363 PLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFG 422
P A + P A Q P L L ++ +L GG+ GF
Sbjct: 290 PHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMLHGGT---------GFA 340
Query: 423 GV----PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD- 477
G+ P+ Y Q + +G IIG+ G + ++R+ SG++I I++
Sbjct: 341 GIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP 400
Query: 478 -SSTPERIVTVIGSMDSLFRAFSLI 501
+ R VT+ GS S+ A LI
Sbjct: 401 VEGSSGRQVTITGSAASISLAQYLI 425
>gi|344276217|ref|XP_003409905.1| PREDICTED: poly(rC)-binding protein 4-like [Loxodonta africana]
Length = 362
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 186/353 (52%), Gaps = 54/353 (15%)
Query: 21 REESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLI 80
R S ++I IS+ S PERI T+ GS ++F A S+I ++E + GGN +
Sbjct: 3 RGRSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNISRPPV 61
Query: 81 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
LRL++PASQCGS+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+
Sbjct: 62 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 121
Query: 141 IYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAAL 200
+ QIC ++++SPPKGATIPY P SL L +
Sbjct: 122 VRQICAVILESPPKGATIPYHP-------------------SL------------SLGTV 150
Query: 201 GLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQNQNQHNRNNRDGPSQKTNQQQ 259
L N G + G A A + Q + H +P + PS +T+ Q
Sbjct: 151 LLSANQGFSVQGQYGAVTPAEVTKLQQLSGHTVPFASPSVVAGLD------PSTQTSSQ- 203
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P
Sbjct: 204 -----EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPV 255
Query: 320 AIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
+IALAQYLI +E ++ G G +D P S PL L + P
Sbjct: 256 SIALAQYLITACLETAKSTSGGTPGSA------PADLPAPFSPPLTALPTAPP 302
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 186/353 (52%), Gaps = 54/353 (15%)
Query: 466 REESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLI 525
R S ++I IS+ S PERI T+ GS ++F A S+I ++E + GGN +
Sbjct: 3 RGRSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNISRPPV 61
Query: 526 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
LRL++PASQCGS+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+
Sbjct: 62 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILC 121
Query: 586 IYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAAL 645
+ QIC ++++SPPKGATIPY P SL L +
Sbjct: 122 VRQICAVILESPPKGATIPYHP-------------------SL------------SLGTV 150
Query: 646 GLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQNQNQHNRNNRDGPSQKTNQQQ 704
L N G + G A A + Q + H +P + PS +T+ Q
Sbjct: 151 LLSANQGFSVQGQYGAVTPAEVTKLQQLSGHTVPFASPSVVAGLD------PSTQTSSQ- 203
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P
Sbjct: 204 -----EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPV 255
Query: 765 AIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+IALAQYLI +E ++ G G +D P S PL L + P
Sbjct: 256 SIALAQYLITACLETAKSTSGGTPGSA------PADLPAPFSPPLTALPTAPP 302
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 63 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 122
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 123 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHT 182
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 183 VPFASPSVVAGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 241
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 242 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTA 300
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 301 PPGLLGTPYAISLS 314
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 67 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 126
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 127 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHTVPFA 186
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 187 SPSVVAGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 245
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 246 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTAPPGL 304
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 305 LGTPYAISLS 314
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 128/175 (73%), Gaps = 5/175 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVKK+REESG++I ISD S+PERIVT+ G+ + +F+AF++I
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISDGSSPERIVTITGASEVIFKAFAMI 78
Query: 502 TKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+ EE N + + LRL+ PASQCGS+IGKGGS+IK IRE++GA V
Sbjct: 79 AEKFEEDILASMINSTVTSRPP---VTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQ 135
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG 614
VA D+LP+STER V I G P A+TQ + IC +M++SPPKGATIPYRP P GG
Sbjct: 136 VAGDLLPDSTERAVTISGTPHAITQCVKHICTVMLESPPKGATIPYRPKPSAGGG 190
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 125/171 (73%), Gaps = 5/171 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I ISD S+PERIVT+ G+ + +F+AF++I +
Sbjct: 23 MHGKEVGSIIGKKGETVKKMREESGARINISDGSSPERIVTITGASEVIFKAFAMIAEKF 82
Query: 61 EE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
EE N + + LRL+ PASQCGS+IGKGGS+IK IRE++GA V VA D
Sbjct: 83 EEDILASMINSTVTSRPP---VTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD 139
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG 169
+LP+STER V I G P A+TQ + IC +M++SPPKGATIPYRP P GG
Sbjct: 140 LLPDSTERAVTISGTPHAITQCVKHICTVMLESPPKGATIPYRPKPSAGGG 190
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + P G++IGKGG+KI EIR+ +GA +++ + + DS +R +T++GTP AI
Sbjct: 101 VTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDLLPDSTERAVTISGTPHAI 158
Query: 322 A-LAQYLINMSVE 333
+++ + +E
Sbjct: 159 TQCVKHICTVMLE 171
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + P G++IGKGG+KI EIR+ +GA +++ + + DS +R +T++GTP AI
Sbjct: 101 VTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDLLPDSTERAVTISGTPHAI 158
Query: 767 A-LAQYLINMSVE 778
+++ + +E
Sbjct: 159 TQCVKHICTVMLE 171
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 68 NKHLGGNGESQL---IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 124
N+ GG E L + +RL++ + GSIIGK G +K +RE SGA + ++ +S
Sbjct: 2 NEREGGVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISDG---SSP 58
Query: 125 EREVNIKGVPDAVTQAIYQI 144
ER V I G + + +A I
Sbjct: 59 ERIVTITGASEVIFKAFAMI 78
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 122/160 (76%), Gaps = 1/160 (0%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
EVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I EE
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDI 113
Query: 65 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 124
N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DMLPNST
Sbjct: 114 INSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST 172
Query: 125 EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
ER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 173 ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 212
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 122/160 (76%), Gaps = 1/160 (0%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
EVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I EE
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDI 113
Query: 510 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 569
N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DMLPNST
Sbjct: 114 INSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNST 172
Query: 570 EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
ER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 173 ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 212
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 128 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 185
Query: 322 ALAQYLINMSVELLRANLNG 341
Q + + V +L + G
Sbjct: 186 --IQCVKQICVVMLESPPKG 203
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 128 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 185
Query: 767 ALAQYLINMSVELLRANLNG 786
Q + + V +L + G
Sbjct: 186 --IQCVKQICVVMLESPPKG 203
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK G +K++RE +G+++ ++ P ER VT+ G+ D++ +
Sbjct: 130 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 189
Query: 499 SLIT 502
I
Sbjct: 190 KQIC 193
>gi|9931476|gb|AAG02185.1| RNA binding protein MCG10 [Homo sapiens]
gi|119585575|gb|EAW65171.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585578|gb|EAW65174.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585579|gb|EAW65175.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
Length = 369
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 190/353 (53%), Gaps = 52/353 (14%)
Query: 20 LREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL 79
L +S ++I IS+ S PERI T+ GS ++F A S+I ++E + GGN
Sbjct: 9 LYLQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPP 67
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL++PASQCGS+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+
Sbjct: 68 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 127
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 199
+ QIC ++++SPPKGATIPY P + L+ A N
Sbjct: 128 CVRQICAVILESPPKGATIPYHP-------------SLSLGTVLLSA----NQ------- 163
Query: 200 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ 259
G S G G + A + L QL ++ +P + P +T+ Q
Sbjct: 164 ----GFSVQGQYGAVTPAEVTKL--QQLSSHAVPFATPSVVPGLD------PGTQTSSQ- 210
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P
Sbjct: 211 -----EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPV 262
Query: 320 AIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
+IALAQYLI +E ++ GG S+ +D P S PL L + P
Sbjct: 263 SIALAQYLITACLETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 309
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 190/353 (53%), Gaps = 52/353 (14%)
Query: 465 LREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL 524
L +S ++I IS+ S PERI T+ GS ++F A S+I ++E + GGN
Sbjct: 9 LYLQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPP 67
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LRL++PASQCGS+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+
Sbjct: 68 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 127
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 644
+ QIC ++++SPPKGATIPY P + L+ A N
Sbjct: 128 CVRQICAVILESPPKGATIPYHP-------------SLSLGTVLLSA----NQ------- 163
Query: 645 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ 704
G S G G + A + L QL ++ +P + P +T+ Q
Sbjct: 164 ----GFSVQGQYGAVTPAEVTKL--QQLSSHAVPFATPSVVPGLD------PGTQTSSQ- 210
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P
Sbjct: 211 -----EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPV 262
Query: 765 AIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+IALAQYLI +E ++ GG S+ +D P S PL L + P
Sbjct: 263 SIALAQYLITACLETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 309
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 70 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 129
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 130 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHA 189
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 190 VPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 248
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 249 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTA 307
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 308 PPGLLGTPYAISLS 321
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 74 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 133
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 134 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFA 193
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 194 TPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 252
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 253 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTAPPGL 311
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 312 LGTPYAISLS 321
>gi|194387672|dbj|BAG61249.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 186/335 (55%), Gaps = 66/335 (19%)
Query: 20 LREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL 79
+REESG++I IS+ + PERI+T+ G +++F+AF++I +EE + +
Sbjct: 1 MREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP- 59
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DMLPNSTER + I G+P ++ +
Sbjct: 60 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 119
Query: 140 AIYQICLIMVD----SPPKGATIPYRPLPQN-----AGGPGLIGNQFGMQNSLMGAPDMG 190
+ QIC++M++ SPPKG TIPYRP P + AGG +Q MQ S G
Sbjct: 120 CVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPM-THG 178
Query: 191 NNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG 250
N +G+ + +S ++K D
Sbjct: 179 NTGFSGIES-----------------------SSPEVK---------------GYWGLDA 200
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
+Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+ E S DR
Sbjct: 201 SAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV---EGSTDR 250
Query: 311 TITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 251 QVTITGSAASISLAQYLINV-------RLSSETGG 278
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 186/335 (55%), Gaps = 66/335 (19%)
Query: 465 LREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL 524
+REESG++I IS+ + PERI+T+ G +++F+AF++I +EE + +
Sbjct: 1 MREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP- 59
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DMLPNSTER + I G+P ++ +
Sbjct: 60 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 119
Query: 585 AIYQICLIMVD----SPPKGATIPYRPLPQN-----AGGPGLIGNQFGMQNSLMGAPDMG 635
+ QIC++M++ SPPKG TIPYRP P + AGG +Q MQ S G
Sbjct: 120 CVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPM-THG 178
Query: 636 NNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG 695
N +G+ + +S ++K D
Sbjct: 179 NTGFSGIES-----------------------SSPEVK---------------GYWGLDA 200
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
+Q T+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+ E S DR
Sbjct: 201 SAQTTSH-------ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV---EGSTDR 250
Query: 756 TITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 251 QVTITGSAASISLAQYLINV-------RLSSETGG 278
>gi|390347463|ref|XP_792931.3| PREDICTED: poly(rC)-binding protein 3-like [Strongylocentrotus
purpuratus]
Length = 369
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 161/270 (59%), Gaps = 41/270 (15%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRLIVP SQCGS+IGKGGS+IK IRET+ AS+ VAS+MLP+STER V I G P+A+T+
Sbjct: 18 VSLRLIVPTSQCGSLIGKGGSKIKDIRETTSASITVASEMLPSSTERAVTISGTPEAITK 77
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 199
AIYQ+C +M++SPPKGATIPYRP P A P + G+ M L A
Sbjct: 78 AIYQVCCVMLESPPKGATIPYRPKP--ATAPIIFAG---------GSVSMTEQHLHQQQA 126
Query: 200 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRD--GPSQKTN- 256
+ GN ALA L H + Q + + P+ T
Sbjct: 127 YAVHGNY--------------ALAQPDLTKLHHQLALHHQQTPYAIPGQTPFSPAALTQF 172
Query: 257 ---------QQQNQ-ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
Q Q Q T+E+T+PN LIG VIG+GGTKI EIR++SGA I+I+ S +E
Sbjct: 173 AAQTAAPPPQVQGQATTQEITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANS---QEG 229
Query: 307 SNDRTITMTGTPDAIALAQYLINMSVELLR 336
S DR++T+TG+P+++A+AQ LIN S+EL +
Sbjct: 230 STDRSVTITGSPESVAVAQCLINTSLELAK 259
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 161/270 (59%), Gaps = 41/270 (15%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LRLIVP SQCGS+IGKGGS+IK IRET+ AS+ VAS+MLP+STER V I G P+A+T+
Sbjct: 18 VSLRLIVPTSQCGSLIGKGGSKIKDIRETTSASITVASEMLPSSTERAVTISGTPEAITK 77
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 644
AIYQ+C +M++SPPKGATIPYRP P A P + G+ M L A
Sbjct: 78 AIYQVCCVMLESPPKGATIPYRPKP--ATAPIIFAG---------GSVSMTEQHLHQQQA 126
Query: 645 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRD--GPSQKTN- 701
+ GN ALA L H + Q + + P+ T
Sbjct: 127 YAVHGNY--------------ALAQPDLTKLHHQLALHHQQTPYAIPGQTPFSPAALTQF 172
Query: 702 ---------QQQNQ-ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
Q Q Q T+E+T+PN LIG VIG+GGTKI EIR++SGA I+I+ S +E
Sbjct: 173 AAQTAAPPPQVQGQATTQEITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANS---QEG 229
Query: 752 SNDRTITMTGTPDAIALAQYLINMSVELLR 781
S DR++T+TG+P+++A+AQ LIN S+EL +
Sbjct: 230 STDRSVTITGSPESVAVAQCLINTSLELAK 259
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 144/219 (65%), Gaps = 9/219 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKE+GSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS D++FRA S+I
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTDAVFRAVSMI 80
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE + G + LRL++PASQCGS+IGK G++I+ IRE+SGA V VA
Sbjct: 81 AFKLEEDLGD-----GTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQVA 135
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPD + Q + QIC ++++SPPKGATIPY P + G L NQ
Sbjct: 136 GDLLPNSTERAVTVSGVPDTIIQCVRQICAVILESPPKGATIPYHP-GLSLGTILLSANQ 194
Query: 622 -FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG-GMGGG 658
F MQ G P L+ L +L G + GG MG G
Sbjct: 195 GFSMQGQYSGVPP-AEVSLSQLCSLVHGASPGGVSMGTG 232
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 141/215 (65%), Gaps = 9/215 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKE+GSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS D++FRA S+I +
Sbjct: 25 MHGKEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTDAVFRAVSMIAFKL 84
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + G + LRL++PASQCGS+IGK G++I+ IRE+SGA V VA D+L
Sbjct: 85 EEDLGD-----GTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQVAGDLL 139
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ-FGM 179
PNSTER V + GVPD + Q + QIC ++++SPPKGATIPY P + G L NQ F M
Sbjct: 140 PNSTERAVTVSGVPDTIIQCVRQICAVILESPPKGATIPYHP-GLSLGTILLSANQGFSM 198
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGG-GMGGG 213
Q G P L+ L +L G + GG MG G
Sbjct: 199 QGQYSGVPP-AEVSLSQLCSLVHGASPGGVSMGTG 232
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
+ +T + +P G++IGK GTKI EIR+ SGA +++ + + +S +R +T++G P
Sbjct: 96 RTPVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQV--AGDLLPNSTERAVTVSGVP 153
Query: 319 DAI 321
D I
Sbjct: 154 DTI 156
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 704 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 763
+ +T + +P G++IGK GTKI EIR+ SGA +++ + + +S +R +T++G P
Sbjct: 96 RTPVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQV--AGDLLPNSTERAVTVSGVP 153
Query: 764 DAI 766
D I
Sbjct: 154 DTI 156
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 73 GNGESQL---IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
G E QL + LR+++ + GSIIGK G +K IRE S A + ++ P ER
Sbjct: 9 GPREPQLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCP---ERITT 65
Query: 130 IKGVPDAVTQAIYQI 144
I G DAV +A+ I
Sbjct: 66 ITGSTDAVFRAVSMI 80
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 518 GNGESQL---IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
G E QL + LR+++ + GSIIGK G +K IRE S A + ++ P ER
Sbjct: 9 GPREPQLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCP---ERITT 65
Query: 575 IKGVPDAVTQAIYQI 589
I G DAV +A+ I
Sbjct: 66 ITGSTDAVFRAVSMI 80
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 195 bits (496), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 129/175 (73%), Gaps = 1/175 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 185
Score = 192 bits (488), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 185
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 --ALAQYLINM 330
+ Q + M
Sbjct: 156 IECVKQICVVM 166
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 767 --ALAQYLINM 775
+ Q + M
Sbjct: 156 IECVKQICVVM 166
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 129/175 (73%), Gaps = 1/175 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 185
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 185
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 --ALAQYLINM 330
+ Q + M
Sbjct: 156 IECVKQICVVM 166
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 767 --ALAQYLINM 775
+ Q + M
Sbjct: 156 IECVKQICVVM 166
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 129/175 (73%), Gaps = 1/175 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 185
Score = 192 bits (488), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 185
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 --ALAQYLINM 330
+ Q + M
Sbjct: 156 IECVKQICVVM 166
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 767 --ALAQYLINM 775
+ Q + M
Sbjct: 156 IECVKQICVVM 166
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 122/166 (73%), Gaps = 5/166 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKE+GSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS D++FRA S+I
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTDAVFRAVSMI 80
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE + G + LRL++PASQCGS+IGK G++I+ IRE+SGA V VA
Sbjct: 81 AFKLEEDLGD-----GTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQVA 135
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
D+LPNSTER V + GVPD + Q + QIC ++++SPPKGATIPY P
Sbjct: 136 GDLLPNSTERAVTVSGVPDTIIQCVRQICAVILESPPKGATIPYHP 181
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 119/162 (73%), Gaps = 5/162 (3%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKE+GSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS D++FRA S+I +
Sbjct: 25 MHGKEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTDAVFRAVSMIAFKL 84
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + G + LRL++PASQCGS+IGK G++I+ IRE+SGA V VA D+L
Sbjct: 85 EEDLGD-----GTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQVAGDLL 139
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
PNSTER V + GVPD + Q + QIC ++++SPPKGATIPY P
Sbjct: 140 PNSTERAVTVSGVPDTIIQCVRQICAVILESPPKGATIPYHP 181
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
+ +T + +P G++IGK GTKI EIR+ SGA +++ + + +S +R +T++G P
Sbjct: 96 RTPVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQV--AGDLLPNSTERAVTVSGVP 153
Query: 319 DAI 321
D I
Sbjct: 154 DTI 156
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 704 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 763
+ +T + +P G++IGK GTKI EIR+ SGA +++ + + +S +R +T++G P
Sbjct: 96 RTPVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQV--AGDLLPNSTERAVTVSGVP 153
Query: 764 DAI 766
D I
Sbjct: 154 DTI 156
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 73 GNGESQL---IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
G E QL + LR+++ + GSIIGK G +K IRE S A + ++ P ER
Sbjct: 9 GPREPQLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCP---ERITT 65
Query: 130 IKGVPDAVTQAIYQI 144
I G DAV +A+ I
Sbjct: 66 ITGSTDAVFRAVSMI 80
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 518 GNGESQL---IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
G E QL + LR+++ + GSIIGK G +K IRE S A + ++ P ER
Sbjct: 9 GPREPQLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCP---ERITT 65
Query: 575 IKGVPDAVTQAIYQI 589
I G DAV +A+ I
Sbjct: 66 ITGSTDAVFRAVSMI 80
>gi|355709455|gb|AES03597.1| poly binding protein 4 [Mustela putorius furo]
Length = 206
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 122/166 (73%), Gaps = 1/166 (0%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 29 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 88
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 89 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 147
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 148 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP 193
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 119/162 (73%), Gaps = 1/162 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 33 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 92
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 93 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 151
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 152 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP 193
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 250 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 309
P+ N + +T + +P G++IGK GTKI EIR+ +GA +++ + + +S +
Sbjct: 99 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTE 156
Query: 310 RTITMTGTPDAIALA 324
R +T++G PDAI L
Sbjct: 157 RAVTVSGVPDAIILC 171
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 695 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 754
P+ N + +T + +P G++IGK GTKI EIR+ +GA +++ + + +S +
Sbjct: 99 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTE 156
Query: 755 RTITMTGTPDAIALA 769
R +T++G PDAI L
Sbjct: 157 RAVTVSGVPDAIILC 171
Score = 39.7 bits (91), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 27 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 83
Query: 140 AIYQI 144
A+ I
Sbjct: 84 AVSMI 88
>gi|395516948|ref|XP_003762645.1| PREDICTED: poly(rC)-binding protein 4 [Sarcophilus harrisii]
Length = 338
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 122/166 (73%), Gaps = 1/166 (0%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IM GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMIMHGKEVGSIIGKKGETVKRIREQSCARITISEGSCPERITTITGSTGAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCTGPPN-GGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP 184
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 119/162 (73%), Gaps = 1/162 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSCARITISEGSCPERITTITGSTGAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCTGPPN-GGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP 184
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +P G++IGK GTKI EIR+ +GA +++ + + +S +R +T++G PDAI
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDAI 159
Query: 322 ALA 324
L
Sbjct: 160 ILC 162
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +P G++IGK GTKI EIR+ +GA +++ + + +S +R +T++G PDAI
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDAI 159
Query: 767 ALA 769
L
Sbjct: 160 ILC 162
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+I+ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSCARITISEGSCP---ERITTITGSTGAVFH 74
Query: 140 AIYQICLIMVDS----PPKGATIPYRPL 163
A+ I + + PP G +I P+
Sbjct: 75 AVSMIAFKLDEDLCTGPPNGGSISKPPV 102
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+I+ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSCARITISEGSCP---ERITTITGSTGAVFH 74
Query: 585 AIYQICLIMVDS----PPKGATIPYRPL 608
A+ I + + PP G +I P+
Sbjct: 75 AVSMIAFKLDEDLCTGPPNGGSISKPPV 102
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 122/161 (75%), Gaps = 5/161 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
+EVGSIIGK GETVKK+REESG++I IS+ S+PERIVT+ G+ +++FR F++I + EE
Sbjct: 6 QEVGSIIGKKGETVKKIREESGARINISEGSSPERIVTITGATEAIFRTFAMIAQKFEE- 64
Query: 64 HKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ N + + + + LRL+ P SQCGS+IGKGGS+IK IRET+GA V VA DMLP
Sbjct: 65 --DINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLP 122
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
+STER V I G P A+TQ + IC +M++SPPKGATIPYRP
Sbjct: 123 DSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRP 163
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 122/161 (75%), Gaps = 5/161 (3%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
+EVGSIIGK GETVKK+REESG++I IS+ S+PERIVT+ G+ +++FR F++I + EE
Sbjct: 6 QEVGSIIGKKGETVKKIREESGARINISEGSSPERIVTITGATEAIFRTFAMIAQKFEE- 64
Query: 509 HKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+ N + + + + LRL+ P SQCGS+IGKGGS+IK IRET+GA V VA DMLP
Sbjct: 65 --DINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLP 122
Query: 567 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+STER V I G P A+TQ + IC +M++SPPKGATIPYRP
Sbjct: 123 DSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRP 163
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + P G++IGKGG+KI EIR+ +GA +++ + + DS +R +T++GTP AI
Sbjct: 81 VTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV--AGDMLPDSTERAVTISGTPQAI 138
Query: 322 A-LAQYLINMSVE 333
+++ ++ +E
Sbjct: 139 TQCVRHICSVMLE 151
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + P G++IGKGG+KI EIR+ +GA +++ + + DS +R +T++GTP AI
Sbjct: 81 VTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV--AGDMLPDSTERAVTISGTPQAI 138
Query: 767 A-LAQYLINMSVE 778
+++ ++ +E
Sbjct: 139 TQCVRHICSVMLE 151
>gi|198416446|ref|XP_002119674.1| PREDICTED: similar to rCG61051 [Ciona intestinalis]
Length = 465
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/348 (38%), Positives = 189/348 (54%), Gaps = 20/348 (5%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS-DSSTPERIVTVIGSMDSLFRAFSL 500
+R +M GKE+G IIGK+G + K R ESG++I IS + S PERIVT+ G + +A L
Sbjct: 12 VRMLMIGKEIGGIIGKAGTNIAKFRSESGARITISSEQSVPERIVTITGGRGQIHKAVEL 71
Query: 501 ITKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
I + H + N L + + + +RLIVPASQCGSIIGKGG +IK IR+T+G ++
Sbjct: 72 IAGKM---HSDINSGLSNCATNTVPVTIRLIVPASQCGSIIGKGGVKIKEIRDTTGCAIQ 128
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIG 619
V S+MLPN +ER V + G P + I +C +M+ P K AT+P++P + G P I
Sbjct: 129 VQSEMLPNCSERTVTLSGAPSTILHCIDMLCDVMIQYPAKTATVPFKP---DVGNPTCIF 185
Query: 620 NQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR 679
+Q G L G G G AA A S +
Sbjct: 186 HQ-GKTYMLQGXXXXXXXXXXXXXXXXXXYEFTLGKSG---TAAPMIFARSSGNHQYTDG 241
Query: 680 NQNQNQNQHNRNNRDGPSQKTNQQQNQI-------TKEMTVPNELIGAVIGKGGTKIFEI 732
N N + D P N + N T+E+TV NE +G +IGKGG++I EI
Sbjct: 242 NCNHFTMDAAEDIEDLPCHSVNIEANFPARLISCNTQELTVGNEFMGCIIGKGGSRIKEI 301
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELL 780
R +SGA I+I+K E+E++S DR IT+ G+ +AI+LA YLI +SV +
Sbjct: 302 RMLSGAQIQINK-VEKEDESVDRKITIQGSAEAISLAYYLITLSVNMF 348
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 176/332 (53%), Gaps = 20/332 (6%)
Query: 13 SGETVKKLREESGSKIYIS-DSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHL 71
+G + K R ESG++I IS + S PERIVT+ G + +A LI + H + N L
Sbjct: 28 AGTNIAKFRSESGARITISSEQSVPERIVTITGGRGQIHKAVELIAGKM---HSDINSGL 84
Query: 72 GGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
+ + + +RLIVPASQCGSIIGKGG +IK IR+T+G ++ V S+MLPN +ER V +
Sbjct: 85 SNCATNTVPVTIRLIVPASQCGSIIGKGGVKIKEIRDTTGCAIQVQSEMLPNCSERTVTL 144
Query: 131 KGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMG 190
G P + I +C +M+ P K AT+P++P + G P I +Q G L G
Sbjct: 145 SGAPSTILHCIDMLCDVMIQYPAKTATVPFKP---DVGNPTCIFHQ-GKTYMLQGXXXXX 200
Query: 191 NNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG 250
G G AA A S + N N + D
Sbjct: 201 XXXXXXXXXXXXXYEFTLGKSG---TAAPMIFARSSGNHQYTDGNCNHFTMDAAEDIEDL 257
Query: 251 PSQKTNQQQNQI-------TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
P N + N T+E+TV NE +G +IGKGG++I EIR +SGA I+I+K E+
Sbjct: 258 PCHSVNIEANFPARLISCNTQELTVGNEFMGCIIGKGGSRIKEIRMLSGAQIQINK-VEK 316
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMSVELL 335
E++S DR IT+ G+ +AI+LA YLI +SV +
Sbjct: 317 EDESVDRKITIQGSAEAISLAYYLITLSVNMF 348
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 431 ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTV 487
+N T V +R I+ + GSIIGK G +K++R+ +G I + P ER VT+
Sbjct: 85 SNCATNTVPVTIRLIVPASQCGSIIGKGGVKIKEIRDTTGCAIQVQSEMLPNCSERTVTL 144
Query: 488 IGSMDSLFRAFSLITKNIEEF 508
G+ ++ ++ + ++
Sbjct: 145 SGAPSTILHCIDMLCDVMIQY 165
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 172/306 (56%), Gaps = 39/306 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGK 724
G +IG+
Sbjct: 292 GCIIGR 297
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 168/298 (56%), Gaps = 39/298 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGK 279
+ R Q+ H G + + + Q T E+T+PN LIG +IG+
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGR 297
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG---NCPERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 129/179 (72%), Gaps = 5/179 (2%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNA 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSS 189
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 125/171 (73%), Gaps = 5/171 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQNA 167
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P ++
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSS 189
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 --ALAQYLINM 330
+ Q + M
Sbjct: 156 IECVKQICVVM 166
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 767 --ALAQYLINM 775
+ Q + M
Sbjct: 156 IECVKQICVVM 166
>gi|113931242|ref|NP_001039068.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89273953|emb|CAJ81328.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 157/262 (59%), Gaps = 29/262 (11%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DMLPNSTER V I G PDA+ Q
Sbjct: 12 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 71
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGMQNSLMGAPDMGNNPLAG-- 196
+ QIC++M++SPPKGATIPYRP P A GP + G Q + L A GN+ +
Sbjct: 72 CVKQICVVMLESPPKGATIPYRPKP--ASGPIIFAGGQVRAETILASA---GNHTVLAQP 126
Query: 197 --LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK 254
A + G + L L QL H P Q D S
Sbjct: 127 QPAPAFAIQGQY------AIPHPDLTKL--HQLAMQHTPFTP-LGQTTPGFPGLDATSPT 177
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 314
++ E+T+PN+LIG +IG+ G+KI EIR++SGA I+I+ +S E + +R +T+
Sbjct: 178 SSH-------ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANAS---EGNGERQVTI 227
Query: 315 TGTPDAIALAQYLINMSVELLR 336
TG+P I+LAQYLIN S+E+ +
Sbjct: 228 TGSPANISLAQYLINASLEMAK 249
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 157/262 (59%), Gaps = 29/262 (11%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DMLPNSTER V I G PDA+ Q
Sbjct: 12 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 71
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI-GNQFGMQNSLMGAPDMGNNPLAG-- 641
+ QIC++M++SPPKGATIPYRP P A GP + G Q + L A GN+ +
Sbjct: 72 CVKQICVVMLESPPKGATIPYRPKP--ASGPIIFAGGQVRAETILASA---GNHTVLAQP 126
Query: 642 --LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK 699
A + G + L L QL H P Q D S
Sbjct: 127 QPAPAFAIQGQY------AIPHPDLTKL--HQLAMQHTPFTP-LGQTTPGFPGLDATSPT 177
Query: 700 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 759
++ E+T+PN+LIG +IG+ G+KI EIR++SGA I+I+ +S E + +R +T+
Sbjct: 178 SSH-------ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANAS---EGNGERQVTI 227
Query: 760 TGTPDAIALAQYLINMSVELLR 781
TG+P I+LAQYLIN S+E+ +
Sbjct: 228 TGSPANISLAQYLINASLEMAK 249
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK G +K++RE +G+++ ++ P ER VT+ G+ D++ +
Sbjct: 14 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 73
Query: 499 SLI 501
I
Sbjct: 74 KQI 76
>gi|432857879|ref|XP_004068771.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 453
Score = 189 bits (479), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 160/262 (61%), Gaps = 28/262 (10%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL++PASQCGS+IGKGGS+IK IRET+GA V VA D+LPNSTEREV I G DA+ Q
Sbjct: 83 VTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTEREVTISGGQDAIIQ 142
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 199
+ IC ++++SPPKGATIPYRP P G L+G G Q + A D G++PL +
Sbjct: 143 CVKLICTVILESPPKGATIPYRPSP--TPGSVLLG---GTQ--VFEASDFGSHPLFSMVQ 195
Query: 200 LGLGGNSGGGMGG--GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP-SQKTN 256
G+ + GL+ + LA L +Q Q Q P S ++N
Sbjct: 196 GGVDLQQTYAVQSHYGLHHSELAKL------------HQLSIQQQALSAAHVLPASMESN 243
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q +Q E +PN+LIG++IG+ G+KI EIR++SGA I+I + + ++DR +T+TG
Sbjct: 244 SQTSQ---EFIIPNDLIGSIIGRQGSKINEIRQVSGAQIKI---GSQIDSTSDRHVTITG 297
Query: 317 TPDAIALAQYLINMSVELLRAN 338
TP AI LAQYLI +E ++
Sbjct: 298 TPIAINLAQYLITSCLETAKST 319
Score = 189 bits (479), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 160/262 (61%), Gaps = 28/262 (10%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LRL++PASQCGS+IGKGGS+IK IRET+GA V VA D+LPNSTEREV I G DA+ Q
Sbjct: 83 VTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTEREVTISGGQDAIIQ 142
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 644
+ IC ++++SPPKGATIPYRP P G L+G G Q + A D G++PL +
Sbjct: 143 CVKLICTVILESPPKGATIPYRPSP--TPGSVLLG---GTQ--VFEASDFGSHPLFSMVQ 195
Query: 645 LGLGGNSGGGMGG--GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP-SQKTN 701
G+ + GL+ + LA L +Q Q Q P S ++N
Sbjct: 196 GGVDLQQTYAVQSHYGLHHSELAKL------------HQLSIQQQALSAAHVLPASMESN 243
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q +Q E +PN+LIG++IG+ G+KI EIR++SGA I+I + + ++DR +T+TG
Sbjct: 244 SQTSQ---EFIIPNDLIGSIIGRQGSKINEIRQVSGAQIKI---GSQIDSTSDRHVTITG 297
Query: 762 TPDAIALAQYLINMSVELLRAN 783
TP AI LAQYLI +E ++
Sbjct: 298 TPIAINLAQYLITSCLETAKST 319
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK G +K++RE +G+++ ++ P ER VT+ G D++ +
Sbjct: 85 LRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTEREVTISGGQDAIIQCV 144
Query: 499 SLITKNIEE 507
LI I E
Sbjct: 145 KLICTVILE 153
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK G +K++RE +G+++ ++ P ER VT+ G D++ + LI I
Sbjct: 93 QCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTEREVTISGGQDAIIQCVKLICTVIL 152
Query: 62 E 62
E
Sbjct: 153 E 153
>gi|392894107|ref|NP_497351.3| Protein PES-4 [Caenorhabditis elegans]
gi|373220643|emb|CCD73932.1| Protein PES-4 [Caenorhabditis elegans]
Length = 432
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 128/182 (70%), Gaps = 4/182 (2%)
Query: 428 PNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV 487
P + TT + +R +MQGKEVGSIIGK G+ +KK+REESG+KI ISD S PERIVT+
Sbjct: 60 PRETSPSTTSLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTI 119
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
G++ + +AF+++ EE L + I +R+IVPA+QCGS+IGKGGS+I
Sbjct: 120 TGTLGVIGKAFNMVCNKFEE----DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKI 175
Query: 548 KTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
K IRE +GAS+ VAS+MLP+STER V + G DA+ + Q+C I++++PPKG+TI YRP
Sbjct: 176 KDIREATGASIQVASEMLPHSTERAVTLSGTADAINLCMTQVCQILLEAPPKGSTITYRP 235
Query: 608 LP 609
P
Sbjct: 236 KP 237
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 120/164 (73%), Gaps = 4/164 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK G+ +KK+REESG+KI ISD S PERIVT+ G++ + +AF+++
Sbjct: 78 MQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITGTLGVIGKAFNMVCNKF 137
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE L + I +R+IVPA+QCGS+IGKGGS+IK IRE +GAS+ VAS+ML
Sbjct: 138 EE----DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEML 193
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
P+STER V + G DA+ + Q+C I++++PPKG+TI YRP P
Sbjct: 194 PHSTERAVTLSGTADAINLCMTQVCQILLEAPPKGSTITYRPKP 237
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI +IR+ +GA I++ +SE S +R +T++GT DAI
Sbjct: 153 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQV--ASEMLPHSTERAVTLSGTADAI 210
Query: 322 ALA 324
L
Sbjct: 211 NLC 213
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI +IR+ +GA I++ +SE S +R +T++GT DAI
Sbjct: 153 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQV--ASEMLPHSTERAVTLSGTADAI 210
Query: 767 ALA 769
L
Sbjct: 211 NLC 213
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S ++ +RL++ + GSIIGK G QIK IRE SGA + ++ P ER V I G
Sbjct: 69 SLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCP---ERIVTITGTLGV 125
Query: 137 VTQAIYQIC-------LIMVDSPPK 154
+ +A +C L++ +S PK
Sbjct: 126 IGKAFNMVCNKFEEDMLLLPNSVPK 150
>gi|308460519|ref|XP_003092563.1| CRE-PES-4 protein [Caenorhabditis remanei]
gi|308253083|gb|EFO97035.1| CRE-PES-4 protein [Caenorhabditis remanei]
Length = 436
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 126/175 (72%), Gaps = 4/175 (2%)
Query: 435 TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSL 494
TT + +R +MQGKEVGSIIGK G+ +KK+REESG+KI ISD S PERIVT+ G++ +
Sbjct: 68 TTSLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITGTLGVI 127
Query: 495 FRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
+AF+++ EE L + I +R+IVPA+QCGS+IGKGGS+IK IRE +
Sbjct: 128 GKAFNMVCNKFEE----DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIREAT 183
Query: 555 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
GAS+ VAS+MLP+STER V + G DA+ + Q+C I++++PPKG+TI YRP P
Sbjct: 184 GASIQVASEMLPHSTERAVTLSGTADAINLCMTQVCQILLEAPPKGSTITYRPKP 238
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 120/164 (73%), Gaps = 4/164 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK G+ +KK+REESG+KI ISD S PERIVT+ G++ + +AF+++
Sbjct: 79 MQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITGTLGVIGKAFNMVCNKF 138
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE L + I +R+IVPA+QCGS+IGKGGS+IK IRE +GAS+ VAS+ML
Sbjct: 139 EE----DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEML 194
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
P+STER V + G DA+ + Q+C I++++PPKG+TI YRP P
Sbjct: 195 PHSTERAVTLSGTADAINLCMTQVCQILLEAPPKGSTITYRPKP 238
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI +IR+ +GA I++ +SE S +R +T++GT DAI
Sbjct: 154 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQV--ASEMLPHSTERAVTLSGTADAI 211
Query: 322 ALA 324
L
Sbjct: 212 NLC 214
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI +IR+ +GA I++ +SE S +R +T++GT DAI
Sbjct: 154 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQV--ASEMLPHSTERAVTLSGTADAI 211
Query: 767 ALA 769
L
Sbjct: 212 NLC 214
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S ++ +RL++ + GSIIGK G QIK IRE SGA + ++ P ER V I G
Sbjct: 70 SLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCP---ERIVTITGTLGV 126
Query: 137 VTQAIYQIC-------LIMVDSPPK 154
+ +A +C L++ +S PK
Sbjct: 127 IGKAFNMVCNKFEEDMLLLPNSVPK 151
>gi|17384400|emb|CAD13196.1| hnRNP-E2 protein copy b [Xenopus laevis]
Length = 251
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 169/303 (55%), Gaps = 63/303 (20%)
Query: 50 FRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
F+AFS+I +EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++
Sbjct: 1 FKAFSMIIDKLEEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIREST 59
Query: 110 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG 169
GA V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 60 GAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPV 119
Query: 170 PGLIGNQFGMQNSL-MGAPDMGNNPLAGLAA------LGLGGNSGGGMGGGLNAAALAAL 222
G + +Q + PD+ L LA + GN+ G GG++A+A A
Sbjct: 120 IFAGGQAYTIQGQYAIPQPDLTK--LHQLAMQQSHFPMSHSGNT--GFSGGIDASAQA-- 173
Query: 223 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 282
T+H E+T+PN+LIG +IG+ G
Sbjct: 174 ------TSH---------------------------------ELTIPNDLIGCIIGRQGA 194
Query: 283 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 342
KI EIR++SGA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L+ E
Sbjct: 195 KINEIRQMSGAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RLSSE 244
Query: 343 GGG 345
GG
Sbjct: 245 AGG 247
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 169/303 (55%), Gaps = 63/303 (20%)
Query: 495 FRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
F+AFS+I +EE + + + + + LRL+VPASQCGS+IGKGG +IK IRE++
Sbjct: 1 FKAFSMIIDKLEEDISSSMTNSTASSKPP-VTLRLVVPASQCGSLIGKGGCKIKEIREST 59
Query: 555 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG 614
GA V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 60 GAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPV 119
Query: 615 PGLIGNQFGMQNSL-MGAPDMGNNPLAGLAA------LGLGGNSGGGMGGGLNAAALAAL 667
G + +Q + PD+ L LA + GN+ G GG++A+A A
Sbjct: 120 IFAGGQAYTIQGQYAIPQPDLTK--LHQLAMQQSHFPMSHSGNT--GFSGGIDASAQA-- 173
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 727
T+H E+T+PN+LIG +IG+ G
Sbjct: 174 ------TSH---------------------------------ELTIPNDLIGCIIGRQGA 194
Query: 728 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 787
KI EIR++SGA I+I+ E SNDR +T+TG+ +I+LAQYLIN+ L+ E
Sbjct: 195 KINEIRQMSGAQIKIANPV---EGSNDRQVTITGSTASISLAQYLINV-------RLSSE 244
Query: 788 GGG 790
GG
Sbjct: 245 AGG 247
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 170/304 (55%), Gaps = 39/304 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVI 722
G ++
Sbjct: 292 GCLM 295
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 166/296 (56%), Gaps = 39/296 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHATH---DLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVI 277
+ R Q+ H G + + + Q T E+T+PN LIG ++
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCLM 295
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG---NCPERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|307175339|gb|EFN65358.1| Poly(rC)-binding protein 3 [Camponotus floridanus]
Length = 547
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 126/196 (64%), Gaps = 28/196 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R IMQGK SG+KI ISD S PERIVTV G +S+F+A
Sbjct: 16 VTLTIRLIMQGK-------------------SGAKINISDGSCPERIVTVTGPTNSIFKA 56
Query: 498 FSLITKNIEE----FHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIR 551
F+LI K EE FH Q GG G I LRLIVPASQCGS+IGKGGS+IK IR
Sbjct: 57 FTLICKKFEEWCSQFHDMQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIR 116
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN 611
E +GAS+ VAS+MLPNSTER V I G +A+TQ IY IC +M++SPPKGATIPYRP PQ
Sbjct: 117 EVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKGATIPYRPKPQ- 175
Query: 612 AGGPGLI--GNQFGMQ 625
GGP ++ G + +Q
Sbjct: 176 VGGPVILAGGQAYTIQ 191
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/166 (59%), Positives = 119/166 (71%), Gaps = 9/166 (5%)
Query: 23 ESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE----FHKNQNKHLGGNGESQ 78
+SG+KI ISD S PERIVTV G +S+F+AF+LI K EE FH Q GG G
Sbjct: 27 KSGAKINISDGSCPERIVTVTGPTNSIFKAFTLICKKFEEWCSQFHDMQGGGAGGGGGVS 86
Query: 79 L--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
I LRLIVPASQCGS+IGKGGS+IK IRE +GAS+ VAS+MLPNSTER V I G +A
Sbjct: 87 RPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEA 146
Query: 137 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFGMQ 180
+TQ IY IC +M++SPPKGATIPYRP PQ GGP ++ G + +Q
Sbjct: 147 ITQCIYHICCVMLESPPKGATIPYRPKPQ-VGGPVILAGGQAYTIQ 191
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 213/432 (49%), Gaps = 83/432 (19%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK G +K++RE +G+ I ++ P ER VT+ G+ +++ + I +
Sbjct: 100 QCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVML 159
Query: 62 E-------FHKNQNKHLGG-----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
E +GG G++ IQ VPA S + T+
Sbjct: 160 ESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAH----------SDVSTVLPLP 209
Query: 110 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG 169
+ A L T P + A ++ + P P P +A
Sbjct: 210 APAAGPAPPSLNTQTLATSPFAAHPSSSAFAASHGHPLLSTAHLTTPHHPLHPSPLHASV 269
Query: 170 PGLIGNQF---GMQNSL---------MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 217
GL +Q +L MG +G+NPLAGLAALGLGG + GGLN A
Sbjct: 270 AGLADPLLKSGHLQAALPPAHLVADAMG--KLGSNPLAGLAALGLGGLATPANTGGLNPA 327
Query: 218 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 277
ALAALA SQL+T+ N N+ Q NN+ T EMTVPNELIG +I
Sbjct: 328 ALAALAGSQLRTS------NTNRQQPAANNQ--------------THEMTVPNELIGCII 367
Query: 278 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRA 337
GKGGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLINMSVEL +A
Sbjct: 368 GKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLINMSVELQKA 427
Query: 338 NLNGEGGGESNMDDFSSDNNLPSSAPLAGLN-----------ASNPLAAALPQLAQILTK 386
NL + + P S G + ++PLA+A+P LAQ+L+K
Sbjct: 428 NLEAQ------------NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP-LAQLLSK 474
Query: 387 PGALNALTSLSA 398
PGALNAL+SL+A
Sbjct: 475 PGALNALSSLTA 486
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 212/440 (48%), Gaps = 83/440 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R I+ + GS+IGK G +K++RE +G+ I ++ P ER VT+ G+ +++ +
Sbjct: 92 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCI 151
Query: 499 SLITKNIEE-------FHKNQNKHLGG-----NGESQLIQLRLIVPASQCGSIIGKGGSQ 546
I + E +GG G++ IQ VPA S
Sbjct: 152 YHICCVMLESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAH----------SD 201
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 606
+ T+ + A L T P + A ++ + P
Sbjct: 202 VSTVLPLPAPAAGPAPPSLNTQTLATSPFAAHPSSSAFAASHGHPLLSTAHLTTPHHPLH 261
Query: 607 PLPQNAGGPGLIGNQF---GMQNSL---------MGAPDMGNNPLAGLAALGLGGNSGGG 654
P P +A GL +Q +L MG +G+NPLAGLAALGLGG +
Sbjct: 262 PSPLHASVAGLADPLLKSGHLQAALPPAHLVADAMG--KLGSNPLAGLAALGLGGLATPA 319
Query: 655 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVP 714
GGLN AALAALA SQL+T+ N N+ Q NN+ T EMTVP
Sbjct: 320 NTGGLNPAALAALAGSQLRTS------NTNRQQPAANNQ--------------THEMTVP 359
Query: 715 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
NELIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT+TG PDA+ALAQYLIN
Sbjct: 360 NELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLIN 419
Query: 775 MSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLN-----------ASNPLAAALP 823
MSVEL +ANL + + P S G + ++PLA+A+P
Sbjct: 420 MSVELQKANLEAQ------------NTQTPGSGTTPGASGASASPSTTTTTASPLASAIP 467
Query: 824 QLAQILTKPAGLNASNPLAA 843
LAQ+L+KP LNA + L A
Sbjct: 468 -LAQLLSKPGALNALSSLTA 486
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 90 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTSEAI 147
Query: 322 ALAQYLI 328
Y I
Sbjct: 148 TQCIYHI 154
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI EIR+++GA I++ +SE +S +R +T++GT +AI
Sbjct: 90 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTSEAI 147
Query: 767 ALAQYLI 773
Y I
Sbjct: 148 TQCIYHI 154
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 123/168 (73%), Gaps = 4/168 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +MQGKEVGSIIGK G+ +K +R+ SG+KI ISD S PERIVT+ G++D++ +AFS+I
Sbjct: 25 IRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCPERIVTITGNVDTINKAFSMI 84
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+E + L + I +RLIVPA+QCGS+IGKGGS+IK IRE +GAS+ VA
Sbjct: 85 CNKFQE----DMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVA 140
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
S+MLP+STER V I G DA+ + IC I++++PPKG T+PYRP P
Sbjct: 141 SEMLPSSTERAVTISGSADAIVLCMQHICHILLEAPPKGTTLPYRPKP 188
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 120/164 (73%), Gaps = 4/164 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK G+ +K +R+ SG+KI ISD S PERIVT+ G++D++ +AFS+I
Sbjct: 29 MQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCPERIVTITGNVDTINKAFSMICNKF 88
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + L + I +RLIVPA+QCGS+IGKGGS+IK IRE +GAS+ VAS+ML
Sbjct: 89 QE----DMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVASEML 144
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
P+STER V I G DA+ + IC I++++PPKG T+PYRP P
Sbjct: 145 PSSTERAVTISGSADAIVLCMQHICHILLEAPPKGTTLPYRPKP 188
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI EIR+ +GA I++ +SE S +R +T++G+ DAI
Sbjct: 104 ITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV--ASEMLPSSTERAVTISGSADAI 161
Query: 322 ALA-QYLINMSVE 333
L Q++ ++ +E
Sbjct: 162 VLCMQHICHILLE 174
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI EIR+ +GA I++ +SE S +R +T++G+ DAI
Sbjct: 104 ITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV--ASEMLPSSTERAVTISGSADAI 161
Query: 767 ALA-QYLINMSVE 778
L Q++ ++ +E
Sbjct: 162 VLCMQHICHILLE 174
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S ++ +RL++ + GSIIGK G IK+IR+ SGA + ++ P ER V I G D
Sbjct: 20 SVILTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCP---ERIVTITGNVDT 76
Query: 137 VTQAIYQIC 145
+ +A IC
Sbjct: 77 INKAFSMIC 85
>gi|341891904|gb|EGT47839.1| CBN-PES-4 protein [Caenorhabditis brenneri]
Length = 438
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 123/168 (73%), Gaps = 4/168 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +MQGKEVGSIIGK G+ +KK+REESG+KI ISD S PERIVT+ G++ + +AF+++
Sbjct: 78 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITGTLGVIGKAFNMV 137
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
EE L + I +R+IVPA+QCGS+IGKGGS+IK IRE +GAS+ VA
Sbjct: 138 CNKFEE----DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVA 193
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
S+MLP+STER V + G DA+ + Q+C I++++PPKG+TI YRP P
Sbjct: 194 SEMLPHSTERAVTLSGTADAINLCMTQVCQILLEAPPKGSTITYRPKP 241
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 120/164 (73%), Gaps = 4/164 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK G+ +KK+REESG+KI ISD S PERIVT+ G++ + +AF+++
Sbjct: 82 MQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITGTLGVIGKAFNMVCNKF 141
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE L + I +R+IVPA+QCGS+IGKGGS+IK IRE +GAS+ VAS+ML
Sbjct: 142 EE----DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEML 197
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
P+STER V + G DA+ + Q+C I++++PPKG+TI YRP P
Sbjct: 198 PHSTERAVTLSGTADAINLCMTQVCQILLEAPPKGSTITYRPKP 241
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI +IR+ +GA I++ +SE S +R +T++GT DAI
Sbjct: 157 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQV--ASEMLPHSTERAVTLSGTADAI 214
Query: 322 ALA 324
L
Sbjct: 215 NLC 217
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI +IR+ +GA I++ +SE S +R +T++GT DAI
Sbjct: 157 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQV--ASEMLPHSTERAVTLSGTADAI 214
Query: 767 ALA 769
L
Sbjct: 215 NLC 217
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S ++ +RL++ + GSIIGK G QIK IRE SGA + ++ P ER V I G
Sbjct: 73 SLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCP---ERIVTITGTLGV 129
Query: 137 VTQAIYQIC-------LIMVDSPPK 154
+ +A +C L++ +S PK
Sbjct: 130 IGKAFNMVCNKFEEDMLLLPNSVPK 154
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 123/168 (73%), Gaps = 4/168 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +MQGKEVGSIIGK G+ +K +R+ SG+KI ISD S PERIVT+ G++D++ +AFS+I
Sbjct: 25 IRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCPERIVTITGNVDTINKAFSMI 84
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+E + L + I +RLIVPA+QCGS+IGKGGS+IK IRE +GAS+ VA
Sbjct: 85 CNKFQE----DMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVA 140
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
S+MLP+STER V I G DA+ + IC I++++PPKG T+PYRP P
Sbjct: 141 SEMLPSSTERAVTISGSADAIVLCMQHICHILLEAPPKGTTLPYRPKP 188
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 120/164 (73%), Gaps = 4/164 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK G+ +K +R+ SG+KI ISD S PERIVT+ G++D++ +AFS+I
Sbjct: 29 MQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCPERIVTITGNVDTINKAFSMICNKF 88
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + L + I +RLIVPA+QCGS+IGKGGS+IK IRE +GAS+ VAS+ML
Sbjct: 89 QE----DMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVASEML 144
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
P+STER V I G DA+ + IC I++++PPKG T+PYRP P
Sbjct: 145 PSSTERAVTISGSADAIVLCMQHICHILLEAPPKGTTLPYRPKP 188
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI EIR+ +GA I++ +SE S +R +T++G+ DAI
Sbjct: 104 ITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV--ASEMLPSSTERAVTISGSADAI 161
Query: 322 ALA-QYLINMSVE 333
L Q++ ++ +E
Sbjct: 162 VLCMQHICHILLE 174
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI EIR+ +GA I++ +SE S +R +T++G+ DAI
Sbjct: 104 ITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV--ASEMLPSSTERAVTISGSADAI 161
Query: 767 ALA-QYLINMSVE 778
L Q++ ++ +E
Sbjct: 162 VLCMQHICHILLE 174
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S ++ +RL++ + GSIIGK G IK+IR+ SGA + ++ P ER V I G D
Sbjct: 20 SVILTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCP---ERIVTITGNVDT 76
Query: 137 VTQAIYQIC 145
+ +A IC
Sbjct: 77 INKAFSMIC 85
>gi|195552915|ref|XP_002076565.1| GD17651 [Drosophila simulans]
gi|194202176|gb|EDX15752.1| GD17651 [Drosophila simulans]
Length = 213
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 118/152 (77%), Gaps = 3/152 (1%)
Query: 24 SGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLR 83
SG+KI ISD S PERIVTV G+ +++F AF+LITK EE+ +Q +G G++Q I +R
Sbjct: 1 SGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFEEWC-SQFNDVGKVGKTQ-IPIR 58
Query: 84 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQ 143
LIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+MLPNSTER V + G + +TQ IYQ
Sbjct: 59 LIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQ 118
Query: 144 ICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
ICL+M++SPP+GATIPYRP PQ GP ++ N
Sbjct: 119 ICLVMLESPPRGATIPYRPKPQ-VTGPVILAN 149
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 118/152 (77%), Gaps = 3/152 (1%)
Query: 469 SGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLR 528
SG+KI ISD S PERIVTV G+ +++F AF+LITK EE+ +Q +G G++Q I +R
Sbjct: 1 SGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKFEEWC-SQFNDVGKVGKTQ-IPIR 58
Query: 529 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQ 588
LIVPASQCGS+IGK GS+IK IR+T+G S+ VAS+MLPNSTER V + G + +TQ IYQ
Sbjct: 59 LIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQ 118
Query: 589 ICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 620
ICL+M++SPP+GATIPYRP PQ GP ++ N
Sbjct: 119 ICLVMLESPPRGATIPYRPKPQ-VTGPVILAN 149
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
+ QI + VP G++IGK G+KI EIR+ +G I++ +SE +S +R +T++G+
Sbjct: 52 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV--ASEMLPNSTERAVTLSGSA 109
Query: 319 DAIALAQYLINM 330
+ I Y I +
Sbjct: 110 EQITQCIYQICL 121
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 704 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 763
+ QI + VP G++IGK G+KI EIR+ +G I++ +SE +S +R +T++G+
Sbjct: 52 KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV--ASEMLPNSTERAVTLSGSA 109
Query: 764 DAIALAQYLINM 775
+ I Y I +
Sbjct: 110 EQITQCIYQICL 121
>gi|312370956|gb|EFR19248.1| hypothetical protein AND_22817 [Anopheles darlingi]
Length = 463
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 192/429 (44%), Gaps = 145/429 (33%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RLI+ + GSIIGK G +K RE
Sbjct: 21 LTIRLIMQGKEVGSIIGKKGEIVKRFRE-------------------------------- 48
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 199
+SPPKGATIPYRP PQ GP ++ N G ++ G + +
Sbjct: 49 ----------ESPPKGATIPYRPKPQ-VNGPVIVAN--GQAYTIQGNYAVPAQETCTVFP 95
Query: 200 LGLGGNSGGGMGG---------------------GLNAAALAALASSQLKTNHMPRNQNQ 238
L + G G+ G + LAALA SQL+TN
Sbjct: 96 LAISGGLHAGISGLADPLLKGTHLQGAIPPHHLQPIPDVTLAALAGSQLRTN-------- 147
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
NR+ +Q +Q EMTVPN+LIG +IGKGGTKI EIR+ISGAMIRIS
Sbjct: 148 -------TNRNVATQVQSQSH-----EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRIS 195
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNL 358
E + + DRTIT+TG PD++ALAQYLINMSVEL +ANL E G + +
Sbjct: 196 NCEERDSGNTDRTITITGNPDSVALAQYLINMSVELQKANLGDEAGTTAAAASAQAVGAQ 255
Query: 359 PSSAPLA----------------------------------------GLNASNPLAAALP 378
P+S + + +NPLA A+P
Sbjct: 256 PASTGIVPPSTAATVAAAASAAAAAAANPNVASVSAANTNAAAAAAAAASVTNPLATAIP 315
Query: 379 QLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGV 438
LAQ+L+KPGALNALTSLSALGGL+DLLG SSG + IQTTGV
Sbjct: 316 -LAQLLSKPGALNALTSLSALGGLTDLLGNLSSGTTA--------------VTPIQTTGV 360
Query: 439 QR----RMR 443
R RMR
Sbjct: 361 NRTKTTRMR 369
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 190/448 (42%), Gaps = 164/448 (36%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ +RLI+ + GSIIGK G +K RE
Sbjct: 21 LTIRLIMQGKEVGSIIGKKGEIVKRFRE-------------------------------- 48
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 644
+SPPKGATIPYRP PQ GP ++ N G ++ G + +
Sbjct: 49 ----------ESPPKGATIPYRPKPQ-VNGPVIVAN--GQAYTIQGNYAVPAQETCTVFP 95
Query: 645 LGLGGNSGGGMGG---------------------GLNAAALAALASSQLKTNHMPRNQNQ 683
L + G G+ G + LAALA SQL+TN
Sbjct: 96 LAISGGLHAGISGLADPLLKGTHLQGAIPPHHLQPIPDVTLAALAGSQLRTN-------- 147
Query: 684 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 743
NR+ +Q +Q EMTVPN+LIG +IGKGGTKI EIR+ISGAMIRIS
Sbjct: 148 -------TNRNVATQVQSQSH-----EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRIS 195
Query: 744 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNL 803
E + + DRTIT+TG PD++ALAQYLINMSVEL +ANL E G + +
Sbjct: 196 NCEERDSGNTDRTITITGNPDSVALAQYLINMSVELQKANLGDEAGTTAAAASAQAVGAQ 255
Query: 804 PSSAPLA----------------------------------------GLNASNPLAAALP 823
P+S + + +NPLA A+P
Sbjct: 256 PASTGIVPPSTAATVAAAASAAAAAAANPNVASVSAANTNAAAAAAAAASVTNPLATAIP 315
Query: 824 QLAQILTKPAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGS 883
LAQ+L +KPGALNALTSLSALGGL+DLLG SSG +
Sbjct: 316 -LAQLL-----------------------SKPGALNALTSLSALGGLTDLLGNLSSGTTA 351
Query: 884 GNSGGFGGVPQGPNYANIQTTGVQRRNS 911
IQTTGV R +
Sbjct: 352 --------------VTPIQTTGVNRTKT 365
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSK 472
V +R IMQGKEVGSIIGK GE VK+ REES K
Sbjct: 18 AVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESPPK 53
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ N N+++ +SQ + VP G IIGKGG++I IR+ SGA + +++
Sbjct: 143 QLRTNTNRNVATQVQSQ--SHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEER 200
Query: 122 NS--TEREVNIKGVPDAVTQAIYQI 144
+S T+R + I G PD+V A Y I
Sbjct: 201 DSGNTDRTITITGNPDSVALAQYLI 225
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+ N N+++ +SQ + VP G IIGKGG++I IR+ SGA + +++
Sbjct: 143 QLRTNTNRNVATQVQSQ--SHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEER 200
Query: 567 NS--TEREVNIKGVPDAVTQAIYQI 589
+S T+R + I G PD+V A Y I
Sbjct: 201 DSGNTDRTITITGNPDSVALAQYLI 225
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 22/27 (81%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSK 27
MQGKEVGSIIGK GE VK+ REES K
Sbjct: 27 MQGKEVGSIIGKKGEIVKRFREESPPK 53
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+G IIGK G + ++R+ SG+ I IS DS +R +T+ G+ DS+ A LI ++
Sbjct: 170 IGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLINMSV 229
Query: 61 E 61
E
Sbjct: 230 E 230
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 505
+G IIGK G + ++R+ SG+ I IS DS +R +T+ G+ DS+ A LI ++
Sbjct: 170 IGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLINMSV 229
Query: 506 E 506
E
Sbjct: 230 E 230
>gi|402886179|ref|XP_003906515.1| PREDICTED: poly(rC)-binding protein 2 [Papio anubis]
Length = 340
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 188/366 (51%), Gaps = 54/366 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE + A+
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIREVTEAA 130
Query: 558 V--YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN---- 611
+ Y+ P L + SPPKG TIPYRP P +
Sbjct: 131 LKPYLFLFFSP------------------------LTLSQSPPKGVTIPYRPKPSSSPVI 166
Query: 612 -AGGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + P M NP L G L A + G + L L
Sbjct: 167 FAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKL 220
Query: 668 ASSQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
++ +H P N + + + G + + E+T+PN+LIG +IG+
Sbjct: 221 HQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGR 280
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L
Sbjct: 281 QGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RL 330
Query: 785 NGEGGG 790
+ E GG
Sbjct: 331 SSETGG 336
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 184/358 (51%), Gaps = 54/358 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV--YVASD 118
EE + + + LRL+VPASQCGS+IGKGG +IK IRE + A++ Y+
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIREVTEAALKPYLFLF 138
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLI 173
P L + SPPKG TIPYRP P + AGG
Sbjct: 139 FSP------------------------LTLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRY 174
Query: 174 GNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ P M NP L G L A + G + L L ++ +
Sbjct: 175 STGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQS 228
Query: 231 HMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
H P N + + + G + + E+T+PN+LIG +IG+ G KI EI
Sbjct: 229 HFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEI 288
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
R++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 289 RQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 336
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 117/159 (73%), Gaps = 1/159 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDITNSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
V VA DMLPNSTER V I G PDA+ Q + QIC++M+++
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEA 169
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDITNSMSNSTATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
PNSTER V I G PDA+ Q + QIC++M+++
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLEA 169
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 237 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 293
Query: 323 LAQYLIN 329
LAQYLIN
Sbjct: 294 LAQYLIN 300
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 237 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 293
Query: 768 LAQYLIN 774
LAQYLIN
Sbjct: 294 LAQYLIN 300
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 322 ALAQYLINMSVELLRA 337
Q + + V +L A
Sbjct: 156 --IQCVKQICVVMLEA 169
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 767 ALAQYLINMSVELLRA 782
Q + + V +L A
Sbjct: 156 --IQCVKQICVVMLEA 169
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 85/201 (42%), Gaps = 54/201 (26%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI-------------SDSSTPERIVTVI 488
+R ++ + GS+IGK G +K++RE +G+++ + + S TP+ I+ +
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 159
Query: 489 GSMDSLFRA-------FSLITKNIEEFHK-------------------NQNKHLGGNGES 522
+ + +++ ++ + H+ + L + E+
Sbjct: 160 KQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEA 219
Query: 523 QLIQ--------------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
Q + L +P G IIG+ G++I IR+ SGA + +A + S
Sbjct: 220 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGS 278
Query: 569 TEREVNIKGVPDAVTQAIYQI 589
+ER++ I G P ++ A Y I
Sbjct: 279 SERQITITGTPANISLAQYLI 299
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 81/193 (41%), Gaps = 54/193 (27%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI-------------SDSSTPERIVTVIGSMDSLFR 51
+ GS+IGK G +K++RE +G+++ + + S TP+ I+ + + +
Sbjct: 108 QCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVML 167
Query: 52 A-------FSLITKNIEEFHK-------------------NQNKHLGGNGESQLIQ---- 81
+++ ++ + H+ + L + E+Q +
Sbjct: 168 EAYTIQGQYAIPHPDLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSS 227
Query: 82 ----------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I
Sbjct: 228 GLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITIT 286
Query: 132 GVPDAVTQAIYQI 144
G P ++ A Y I
Sbjct: 287 GTPANISLAQYLI 299
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 129/176 (73%), Gaps = 6/176 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMI 75
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA
Sbjct: 76 IDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA 134
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQNA 612
DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P ++
Sbjct: 135 GDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Score = 180 bits (456), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 126/172 (73%), Gaps = 6/172 (3%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQNA 167
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P ++
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG---NCPERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ +RL++ + GSIIGK G +K IRE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG---NCPERIITLTGPTNAIFK 70
Query: 585 AIYQI 589
A I
Sbjct: 71 AFAMI 75
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 130/180 (72%), Gaps = 6/180 (3%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 21 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 80
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 81 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 139
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQNA 612
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P ++
Sbjct: 140 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 199
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 126/172 (73%), Gaps = 6/172 (3%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 29 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 88
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 89 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 147
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQNA 167
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P ++
Sbjct: 148 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 199
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 107 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 164
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 107 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 164
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ N ER + + G +A+ +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG---NCPERIITLTGPTNAIFK 79
Query: 140 AIYQI 144
A I
Sbjct: 80 AFAMI 84
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 182 bits (462), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 117/159 (73%), Gaps = 1/159 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
V VA DMLPNSTER V I G PDA+ Q + QIC++M+++
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEA 201
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
PNSTER V I G PDA+ Q + QIC++M+++
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLEA 201
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 269 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 325
Query: 323 LAQYLIN 329
LAQYLIN
Sbjct: 326 LAQYLIN 332
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 269 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 325
Query: 768 LAQYLIN 774
LAQYLIN
Sbjct: 326 LAQYLIN 332
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 44/243 (18%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP-SSAPLAGLNASNPLAAALPQL 380
Q + + V +L A +G D + + L P L +NP
Sbjct: 188 --IQCVKQICVVMLEA-YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP-------- 236
Query: 381 AQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 440
PG L S L G S G P +
Sbjct: 237 ----AFPGEKLPLHSSEEAQNL------------MGQSSGLDASPPASTH---------- 270
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+ +G IIG+ G + ++R+ SG++I I++++ + ER +T+ G+ ++ A
Sbjct: 271 --ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQ 328
Query: 499 SLI 501
LI
Sbjct: 329 YLI 331
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 767 ALAQYLINMSVELLRA 782
Q + + V +L A
Sbjct: 188 --IQCVKQICVVMLEA 201
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 85/201 (42%), Gaps = 54/201 (26%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI-------------SDSSTPERIVTVI 488
+R ++ + GS+IGK G +K++RE +G+++ + + S TP+ I+ +
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 191
Query: 489 GSMDSLFRA-------FSLITKNIEEFHK-------------------NQNKHLGGNGES 522
+ + +++ ++ + H+ + L + E+
Sbjct: 192 KQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 251
Query: 523 QLIQ--------------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
Q + L +P G IIG+ G++I IR+ SGA + +A + S
Sbjct: 252 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGS 310
Query: 569 TEREVNIKGVPDAVTQAIYQI 589
+ER++ I G P ++ A Y I
Sbjct: 311 SERQITITGTPANISLAQYLI 331
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 81/193 (41%), Gaps = 54/193 (27%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI-------------SDSSTPERIVTVIGSMDSLFR 51
+ GS+IGK G +K++RE +G+++ + + S TP+ I+ + + +
Sbjct: 140 QCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVML 199
Query: 52 A-------FSLITKNIEEFHK-------------------NQNKHLGGNGESQLIQ---- 81
+++ ++ + H+ + L + E+Q +
Sbjct: 200 EAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSS 259
Query: 82 ----------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I
Sbjct: 260 GLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITIT 318
Query: 132 GVPDAVTQAIYQI 144
G P ++ A Y I
Sbjct: 319 GTPANISLAQYLI 331
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 117/159 (73%), Gaps = 1/159 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
V VA DMLPNSTER V I G PDA+ Q + QIC++M+++
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEA 201
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
PNSTER V I G PDA+ Q + QIC++M+++
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLEA 201
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 269 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 325
Query: 323 LAQYLIN 329
LAQYLIN
Sbjct: 326 LAQYLIN 332
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 269 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 325
Query: 768 LAQYLIN 774
LAQYLIN
Sbjct: 326 LAQYLIN 332
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 44/243 (18%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP-SSAPLAGLNASNPLAAALPQL 380
Q + + V +L A +G D + + L P L +NP
Sbjct: 188 --IQCVKQICVVMLEA-YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP-------- 236
Query: 381 AQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 440
PG L S L G S G P +
Sbjct: 237 ----AFPGEKLPLHSSEEAQNL------------MGQSSGLDASPPASTH---------- 270
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+ +G IIG+ G + ++R+ SG++I I++++ + ER +T+ G+ ++ A
Sbjct: 271 --ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQ 328
Query: 499 SLI 501
LI
Sbjct: 329 YLI 331
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 187
Query: 767 ALAQYLINMSVELLRA 782
Q + + V +L A
Sbjct: 188 --IQCVKQICVVMLEA 201
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 70 HLGGNGESQL--------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
H G ES++ + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 HFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 515 HLGGNGESQL--------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
H G ES++ + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 HFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 85/201 (42%), Gaps = 54/201 (26%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI-------------SDSSTPERIVTVI 488
+R ++ + GS+IGK G +K++RE +G+++ + + S TP+ I+ +
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 191
Query: 489 GSMDSLFRA-------FSLITKNIEEFHK-------------------NQNKHLGGNGES 522
+ + +++ ++ + H+ + L + E+
Sbjct: 192 KQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 251
Query: 523 QLIQ--------------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
Q + L +P G IIG+ G++I IR+ SGA + +A + S
Sbjct: 252 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGS 310
Query: 569 TEREVNIKGVPDAVTQAIYQI 589
+ER++ I G P ++ A Y I
Sbjct: 311 SERQITITGTPANISLAQYLI 331
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 81/193 (41%), Gaps = 54/193 (27%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI-------------SDSSTPERIVTVIGSMDSLFR 51
+ GS+IGK G +K++RE +G+++ + + S TP+ I+ + + +
Sbjct: 140 QCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVML 199
Query: 52 A-------FSLITKNIEEFHK-------------------NQNKHLGGNGESQLIQ---- 81
+++ ++ + H+ + L + E+Q +
Sbjct: 200 EAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSS 259
Query: 82 ----------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I
Sbjct: 260 GLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITIT 318
Query: 132 GVPDAVTQAIYQI 144
G P ++ A Y I
Sbjct: 319 GTPANISLAQYLI 331
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 117/159 (73%), Gaps = 1/159 (0%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 72 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
V VA DMLPNSTER V I G PDA+ Q + QIC++M+++
Sbjct: 131 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEA 169
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 20 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 80 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
PNSTER V I G PDA+ Q + QIC++M+++
Sbjct: 139 PNSTERAVTISGTPDAIIQCVKQICVVMLEA 169
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 237 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 293
Query: 323 LAQYLIN 329
LAQYLIN
Sbjct: 294 LAQYLIN 300
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 237 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 293
Query: 768 LAQYLIN 774
LAQYLIN
Sbjct: 294 LAQYLIN 300
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 44/243 (18%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP-SSAPLAGLNASNPLAAALPQL 380
Q + + V +L A +G D + + L P L +NP
Sbjct: 156 --IQCVKQICVVMLEA-YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP-------- 204
Query: 381 AQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 440
PG L S L G S G P +
Sbjct: 205 ----AFPGEKLPLHSSEEAQNL------------MGQSSGLDASPPASTH---------- 238
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+ +G IIG+ G + ++R+ SG++I I++++ + ER +T+ G+ ++ A
Sbjct: 239 --ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQ 296
Query: 499 SLI 501
LI
Sbjct: 297 YLI 299
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI EIR+ +GA +++ + + +S +R +T++GTPDAI
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLPNSTERAVTISGTPDAI 155
Query: 767 ALAQYLINMSVELLRA 782
Q + + V +L A
Sbjct: 156 --IQCVKQICVVMLEA 169
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 85/201 (42%), Gaps = 54/201 (26%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI-------------SDSSTPERIVTVI 488
+R ++ + GS+IGK G +K++RE +G+++ + + S TP+ I+ +
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 159
Query: 489 GSMDSLFRA-------FSLITKNIEEFHK-------------------NQNKHLGGNGES 522
+ + +++ ++ + H+ + L + E+
Sbjct: 160 KQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEA 219
Query: 523 QLIQ--------------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
Q + L +P G IIG+ G++I IR+ SGA + +A + S
Sbjct: 220 QNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGS 278
Query: 569 TEREVNIKGVPDAVTQAIYQI 589
+ER++ I G P ++ A Y I
Sbjct: 279 SERQITITGTPANISLAQYLI 299
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G DA+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 81/193 (41%), Gaps = 54/193 (27%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI-------------SDSSTPERIVTVIGSMDSLFR 51
+ GS+IGK G +K++RE +G+++ + + S TP+ I+ + + +
Sbjct: 108 QCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVML 167
Query: 52 A-------FSLITKNIEEFHK-------------------NQNKHLGGNGESQLIQ---- 81
+++ ++ + H+ + L + E+Q +
Sbjct: 168 EAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSS 227
Query: 82 ----------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I
Sbjct: 228 GLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITIT 286
Query: 132 GVPDAVTQAIYQI 144
G P ++ A Y I
Sbjct: 287 GTPANISLAQYLI 299
>gi|395835433|ref|XP_003790684.1| PREDICTED: poly(rC)-binding protein 2-like [Otolemur garnettii]
Length = 414
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 178/352 (50%), Gaps = 74/352 (21%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
FS G+Q++
Sbjct: 72 FST-------------------------------------------GAQVQ--------- 79
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 80 --VAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 137
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 138 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 191
Query: 670 SQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
++ +H P N + + + G + + E+T+PN+LIG +IG+ G
Sbjct: 192 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 251
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+S+E
Sbjct: 252 AKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINVSLE 300
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 174/344 (50%), Gaps = 74/344 (21%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AFS
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFST----- 74
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
G+Q++ VA DML
Sbjct: 75 --------------------------------------GAQVQ-----------VAGDML 85
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 86 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 145
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 146 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 199
Query: 233 PR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 200 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 259
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+S+E
Sbjct: 260 MSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINVSLE 300
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 116/288 (40%), Gaps = 66/288 (22%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE--------------------------- 305
+G++IGK G + ++R+ SGA I IS+ + E
Sbjct: 25 VGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFSTGAQVQVAGDM 84
Query: 306 --DSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE---------------GGGESN 348
+S +R IT+ G P +I + + + V +L + G GG+
Sbjct: 85 LPNSTERAITIAGIPQSII--ECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDR 142
Query: 349 MDDFSSDNNLPSSAPLAGLNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDL 405
S + P + P LN PL A Q + +P LT L L
Sbjct: 143 YSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSH 198
Query: 406 LGGGSSGGGSGNSGGFGGVPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGE 460
+ G +G SG P+ Y A+ QTT + + + + +G IIG+ G
Sbjct: 199 FP--MTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGA 252
Query: 461 TVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 506
+ ++R+ SG++I I++ + +R VT+ GS S+ A LI ++E
Sbjct: 253 KINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSLE 300
>gi|326935642|ref|XP_003213877.1| PREDICTED: poly(rC)-binding protein 2-like, partial [Meleagris
gallopavo]
Length = 168
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 121/162 (74%), Gaps = 2/162 (1%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
VGSIIGK G++VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +EE
Sbjct: 1 VGSIIGK-GKSVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDIS 59
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+ + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DMLPNSTE
Sbjct: 60 SSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTE 118
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
R + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 119 RAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 160
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 121/162 (74%), Gaps = 2/162 (1%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHK 510
VGSIIGK G++VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +EE
Sbjct: 1 VGSIIGK-GKSVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDIS 59
Query: 511 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 570
+ + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DMLPNSTE
Sbjct: 60 SSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTE 118
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 612
R + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 119 RAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 160
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 314
T + +T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+
Sbjct: 66 TAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITI 123
Query: 315 TGTPDAI--ALAQYLINM 330
G P +I + Q + M
Sbjct: 124 AGIPQSIIECVKQICVVM 141
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 700 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 759
T + +T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+
Sbjct: 66 TAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITI 123
Query: 760 TGTPDAI--ALAQYLINM 775
G P +I + Q + M
Sbjct: 124 AGIPQSIIECVKQICVVM 141
>gi|224163407|ref|XP_002198626.1| PREDICTED: poly(rC)-binding protein 2-like [Taeniopygia guttata]
Length = 282
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 181/357 (50%), Gaps = 94/357 (26%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +E E++GA
Sbjct: 72 FAMIIDKLE---------------------------------------------ESTGAQ 86
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++
Sbjct: 87 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 146
Query: 618 IGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
G + +Q + PD+ + L L LK +
Sbjct: 147 GGQAYTIQGQYAIPQPDV--------------------------SFYLQLLV---LKIHP 177
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMT---VPNELIGAVIGKGGTKIFEIR 733
P + ++N R ++ T + E+T +P++LIG +IG+ G KI EIR
Sbjct: 178 FPPSPSKN------FLRAFSARLTPSLSSPFPPELTPSLLPSQLIGCIIGRQGAKINEIR 231
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 232 QMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 278
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 177/349 (50%), Gaps = 94/349 (26%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E E++GA V VA DML
Sbjct: 80 E---------------------------------------------ESTGAQVQVAGDML 94
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P ++ G + +Q
Sbjct: 95 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 154
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ PD+ + L L LK + P + ++N
Sbjct: 155 GQYAIPQPDV--------------------------SFYLQLLV---LKIHPFPPSPSKN 185
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMT---VPNELIGAVIGKGGTKIFEIRKISGAMIR 296
R ++ T + E+T +P++LIG +IG+ G KI EIR++SGA I+
Sbjct: 186 ------FLRAFSARLTPSLSSPFPPELTPSLLPSQLIGCIIGRQGAKINEIRQMSGAQIK 239
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 240 IANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 278
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 187/376 (49%), Gaps = 77/376 (20%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + G N + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+ +P++ +A+
Sbjct: 139 GDL-------------LPNSTERAV----------------------------------- 150
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
++ G PD + + A+ L G S G G + A + L QL + +P
Sbjct: 151 -----TVSGVPDAIILCVRQICAVILEGFSVQGQYGAVTPAEVTKL--QQLSGHAVPFAS 203
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 204 PSVVPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 251
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 252 IGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADL 302
Query: 802 NLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 303 PAPFSPPLTALPTAPP 318
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 184/372 (49%), Gaps = 77/372 (20%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + G N + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+
Sbjct: 84 DEDLCAAPAN-GSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDL- 141
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
+P++ +A+
Sbjct: 142 ------------LPNSTERAV--------------------------------------- 150
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
++ G PD + + A+ L G S G G + A + L QL + +P
Sbjct: 151 -TVSGVPDAIILCVRQICAVILEGFSVQGQYGAVTPAEVTKL--QQLSGHAVPFASPSVV 207
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 208 PGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 254
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 255 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPAPF 306
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 307 SPPLTALPTAPP 318
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 45/229 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEEFHKNQNKH-------------LGGNG--------------ESQLIQLRLIV 531
I I E Q ++ L G+ +Q +V
Sbjct: 164 RQICAVILEGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLV 223
Query: 532 PASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI-- 589
P G +IG+ GS+I IR+ SGA + + + + ER V I G P ++ A Y I
Sbjct: 224 PNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITA 282
Query: 590 CLIMVD--------SPPKGATIPYRPLPQNA---GGPGLIGNQFGMQNS 627
CL S P P+ P P A PGL+G + + S
Sbjct: 283 CLETAKSTSGGTPGSAPADLPAPFSP-PLTALPTAPPGLLGTPYAISLS 330
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 45/225 (20%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEEFHKNQNKH-------------LGGNG--------------ESQLIQLRLIVPASQ 90
I E Q ++ L G+ +Q +VP
Sbjct: 168 AVILEGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDL 227
Query: 91 CGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIM 148
G +IG+ GS+I IR+ SGA + + + + ER V I G P ++ A Y I CL
Sbjct: 228 IGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLET 286
Query: 149 VD--------SPPKGATIPYRPLPQNA---GGPGLIGNQFGMQNS 182
S P P+ P P A PGL+G + + S
Sbjct: 287 AKSTSGGTPGSAPADLPAPFSP-PLTALPTAPPGLLGTPYAISLS 330
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 127/199 (63%), Gaps = 15/199 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
++ IMQGK++GSIIGK G T+K+ R+ES + I ISD STPERIV+V G+ D++ AF+LI
Sbjct: 29 LKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTPERIVSVTGTKDAVVTAFALI 88
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+ +E+ K+ +K + + + LRLIVP SQCGSIIGKGG++IK IRE SGASV VA
Sbjct: 89 GQKLEDELKSNSK----SNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVVA 144
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL-----------PQ 610
+ LP S+ER V + G P+A+ I +C +M++ PP+G +PY P PQ
Sbjct: 145 GEFLPGSSERAVTLSGTPEALETCIDLLCGVMIEFPPRGHPMPYTPHKLQQQFGFYGPPQ 204
Query: 611 NAGGPGLIGNQFGMQNSLM 629
G PG G N M
Sbjct: 205 GFGYPGPYGMPHAFPNGFM 223
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 124/195 (63%), Gaps = 15/195 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGK++GSIIGK G T+K+ R+ES + I ISD STPERIV+V G+ D++ AF+LI + +
Sbjct: 33 MQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTPERIVSVTGTKDAVVTAFALIGQKL 92
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E+ K+ +K + + + LRLIVP SQCGSIIGKGG++IK IRE SGASV VA + L
Sbjct: 93 EDELKSNSK----SNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVVAGEFL 148
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL-----------PQNAGG 169
P S+ER V + G P+A+ I +C +M++ PP+G +PY P PQ G
Sbjct: 149 PGSSERAVTLSGTPEALETCIDLLCGVMIEFPPRGHPMPYTPHKLQQQFGFYGPPQGFGY 208
Query: 170 PGLIGNQFGMQNSLM 184
PG G N M
Sbjct: 209 PGPYGMPHAFPNGFM 223
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 254 KTNQQQNQ---ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
K+N + N +T + VP G++IGKGG KI EIR++SGA + + + E S++R
Sbjct: 97 KSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVV--AGEFLPGSSER 154
Query: 311 TITMTGTPDAI 321
+T++GTP+A+
Sbjct: 155 AVTLSGTPEAL 165
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 699 KTNQQQNQ---ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
K+N + N +T + VP G++IGKGG KI EIR++SGA + + + E S++R
Sbjct: 97 KSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVV--AGEFLPGSSER 154
Query: 756 TITMTGTPDAI 766
+T++GTP+A+
Sbjct: 155 AVTLSGTPEAL 165
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
MT+ +G++IG+ G+ I IR++SGA I+I S E + R + +TGT +A+ LAQ
Sbjct: 251 MTILKGAVGSIIGQKGSYITGIRQMSGASIKIGDS---ENGDDKREVLITGTAEAVGLAQ 307
Query: 326 YLIN 329
+LIN
Sbjct: 308 FLIN 311
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
MT+ +G++IG+ G+ I IR++SGA I+I S E + R + +TGT +A+ LAQ
Sbjct: 251 MTILKGAVGSIIGQKGSYITGIRQMSGASIKIGDS---ENGDDKREVLITGTAEAVGLAQ 307
Query: 771 YLIN 774
+LIN
Sbjct: 308 FLIN 311
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 73 GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 132
G G S + L++I+ GSIIGK GS IK R+ S A + ++ P ER V++ G
Sbjct: 20 GRGHSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTP---ERIVSVTG 76
Query: 133 VPDAVTQAIYQI 144
DAV A I
Sbjct: 77 TKDAVVTAFALI 88
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 518 GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 577
G G S + L++I+ GSIIGK GS IK R+ S A + ++ P ER V++ G
Sbjct: 20 GRGHSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTP---ERIVSVTG 76
Query: 578 VPDAVTQAIYQI 589
DAV A I
Sbjct: 77 TKDAVVTAFALI 88
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
+R P++ N + K M + + IG++IGK G+ I + R+ S A I IS S
Sbjct: 10 SRPAESRPAKGRGHSSNLVLK-MIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTP 68
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMSVE 333
E R +++TGT DA+ A LI +E
Sbjct: 69 E-----RIVSVTGTKDAVVTAFALIGQKLE 93
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
+R P++ N + K M + + IG++IGK G+ I + R+ S A I IS S
Sbjct: 10 SRPAESRPAKGRGHSSNLVLK-MIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTP 68
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMSVE 778
E R +++TGT DA+ A LI +E
Sbjct: 69 E-----RIVSVTGTKDAVVTAFALIGQKLE 93
>gi|268570691|ref|XP_002640810.1| C. briggsae CBR-PES-4 protein [Caenorhabditis briggsae]
Length = 447
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 126/192 (65%), Gaps = 21/192 (10%)
Query: 435 TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSL 494
TT + +R +MQGKEVGSIIGK G+ +KK+REESG+KI ISD S PERIVT+ G++ +
Sbjct: 69 TTSLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITGTLGVI 128
Query: 495 FRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
+AF+++ EE L + I +R+IVPA+QCGS+IGKGGS+IK IRE +
Sbjct: 129 GKAFNMVCNKFEE----DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIREAT 184
Query: 555 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD-----------------SP 597
GAS+ VAS+MLP+STER V + G DA+ + Q+C I+++ +P
Sbjct: 185 GASIQVASEMLPHSTERAVTLSGTADAINLCMTQVCQILLEVTRKKLSTENKATFKFQAP 244
Query: 598 PKGATIPYRPLP 609
PKG+TI YRP P
Sbjct: 245 PKGSTITYRPKP 256
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 120/181 (66%), Gaps = 21/181 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK G+ +KK+REESG+KI ISD S PERIVT+ G++ + +AF+++
Sbjct: 80 MQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITGTLGVIGKAFNMVCNKF 139
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE L + I +R+IVPA+QCGS+IGKGGS+IK IRE +GAS+ VAS+ML
Sbjct: 140 EE----DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEML 195
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD-----------------SPPKGATIPYRPL 163
P+STER V + G DA+ + Q+C I+++ +PPKG+TI YRP
Sbjct: 196 PHSTERAVTLSGTADAINLCMTQVCQILLEVTRKKLSTENKATFKFQAPPKGSTITYRPK 255
Query: 164 P 164
P
Sbjct: 256 P 256
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G++IGKGG+KI +IR+ +GA I++ +SE S +R +T++GT DAI
Sbjct: 155 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQV--ASEMLPHSTERAVTLSGTADAI 212
Query: 322 ALAQY-LINMSVELLRANLNGE 342
L + + +E+ R L+ E
Sbjct: 213 NLCMTQVCQILLEVTRKKLSTE 234
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G++IGKGG+KI +IR+ +GA I++ +SE S +R +T++GT DAI
Sbjct: 155 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQV--ASEMLPHSTERAVTLSGTADAI 212
Query: 767 ALAQY-LINMSVELLRANLNGE 787
L + + +E+ R L+ E
Sbjct: 213 NLCMTQVCQILLEVTRKKLSTE 234
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S ++ +RL++ + GSIIGK G QIK IRE SGA + ++ P ER V I G
Sbjct: 71 SLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCP---ERIVTITGTLGV 127
Query: 137 VTQAIYQIC-------LIMVDSPPK 154
+ +A +C L++ +S PK
Sbjct: 128 IGKAFNMVCNKFEEDMLLLPNSVPK 152
>gi|47229298|emb|CAG04050.1| unnamed protein product [Tetraodon nigroviridis]
Length = 455
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 119/185 (64%), Gaps = 25/185 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
+EVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G S+F+AFS+I + +EE
Sbjct: 50 QEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKAFSMIIEKLEED 109
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG------------- 110
+ + + +RL+VPASQCGS+IGKGG +IK IRE SG
Sbjct: 110 ISTSMTNSTATSKPP-VTIRLVVPASQCGSLIGKGGCKIKEIREVSGVAPAGKGFRSLRC 168
Query: 111 -----------ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 159
A V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIP
Sbjct: 169 NPAAVSLQSAGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIP 228
Query: 160 YRPLP 164
YRP P
Sbjct: 229 YRPKP 233
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 119/185 (64%), Gaps = 25/185 (13%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
+EVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G S+F+AFS+I + +EE
Sbjct: 50 QEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKAFSMIIEKLEED 109
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG------------- 555
+ + + +RL+VPASQCGS+IGKGG +IK IRE SG
Sbjct: 110 ISTSMTNSTATSKPP-VTIRLVVPASQCGSLIGKGGCKIKEIREVSGVAPAGKGFRSLRC 168
Query: 556 -----------ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 604
A V VA DMLPNSTER + I G P ++ + + QIC++M++SPPKG TIP
Sbjct: 169 NPAAVSLQSAGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIP 228
Query: 605 YRPLP 609
YRP P
Sbjct: 229 YRPKP 233
>gi|339242773|ref|XP_003377312.1| poly(rC)-binding protein 3 [Trichinella spiralis]
gi|316973900|gb|EFV57443.1| poly(rC)-binding protein 3 [Trichinella spiralis]
Length = 410
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 128/201 (63%), Gaps = 24/201 (11%)
Query: 428 PNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV 487
PN + +QT +R +MQGKEVGSIIGKS +KI ISD + PERIVT+
Sbjct: 34 PNLSLVQT------IRLLMQGKEVGSIIGKSM-----------AKINISDGTCPERIVTI 76
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
GS+ ++ AF +I K EE + + + I RLIVPA+QCG +IG+GGS+I
Sbjct: 77 TGSVQAIDTAFKMICKKFEE----DQQQIPDSVPKPPITFRLIVPATQCGCLIGRGGSKI 132
Query: 548 KTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
K IRE +GAS+ VAS+MLPNSTER V + G +A+ Q + QICLI+++SPPKGA +PYRP
Sbjct: 133 KDIREATGASIQVASEMLPNSTERAVTLSGTAEAIIQCMNQICLILLESPPKGAIVPYRP 192
Query: 608 LPQNAGGPGLIGNQFGMQNSL 628
+P P L N + N++
Sbjct: 193 IP---SIPFLCSNNASVANTI 210
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 119/183 (65%), Gaps = 18/183 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGKS +KI ISD + PERIVT+ GS+ ++ AF +I K
Sbjct: 46 MQGKEVGSIIGKSM-----------AKINISDGTCPERIVTITGSVQAIDTAFKMICKKF 94
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + I RLIVPA+QCG +IG+GGS+IK IRE +GAS+ VAS+ML
Sbjct: 95 EE----DQQQIPDSVPKPPITFRLIVPATQCGCLIGRGGSKIKDIREATGASIQVASEML 150
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + G +A+ Q + QICLI+++SPPKGA +PYRP+P P L N +
Sbjct: 151 PNSTERAVTLSGTAEAIIQCMNQICLILLESPPKGAIVPYRPIP---SIPFLCSNNASVA 207
Query: 181 NSL 183
N++
Sbjct: 208 NTI 210
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G +IG+GG+KI +IR+ +GA I++ +SE +S +R +T++GT +AI
Sbjct: 110 ITFRLIVPATQCGCLIGRGGSKIKDIREATGASIQV--ASEMLPNSTERAVTLSGTAEAI 167
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G +IG+GG+KI +IR+ +GA I++ +SE +S +R +T++GT +AI
Sbjct: 110 ITFRLIVPATQCGCLIGRGGSKIKDIREATGASIQV--ASEMLPNSTERAVTLSGTAEAI 167
>gi|334343559|ref|XP_003341817.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Monodelphis
domestica]
Length = 367
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 191/398 (47%), Gaps = 98/398 (24%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IM GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTGAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 80 AFKLDEDLCTGPPN-GGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRE--------- 129
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
SPPKGATIPY P
Sbjct: 130 ----------------------------------SPPKGATIPYHP-------------S 142
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
+ L+ A N G S G G + A ++ L QL + +P
Sbjct: 143 LSLGTVLLSA----NQ-----------GFSVQGQYGTVTPAEVSKL--QQLSGHPVPFAS 185
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 186 PSVVPGLD------PSAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 233
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E S +R +T+TG+P +IALAQYLI +E ++ G G S D S+
Sbjct: 234 IGN---QAEGSGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG--SGTADLSA-- 286
Query: 802 NLPSSAPLAGLNASNPLAAALPQLAQILTKPAGLNASN 839
P S PLA A L AA P L L P ++ SN
Sbjct: 287 --PFSPPLAPSPALTALPAAPPGL---LGTPYAISLSN 319
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 182/380 (47%), Gaps = 95/380 (25%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTGAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 84 DEDLCTGPPN-GGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------- 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
SPPKGATIPY P +
Sbjct: 130 ------------------------------SPPKGATIPYHP-------------SLSLG 146
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
L+ A N G S G G + A ++ L QL + +P
Sbjct: 147 TVLLSA----NQ-----------GFSVQGQYGTVTPAEVSKL--QQLSGHPVPFASPSVV 189
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 190 PGLD------PSAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 236
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E S +R +T+TG+P +IALAQYLI +E ++ G G S D S+ P
Sbjct: 237 --QAEGSGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG--SGTADLSA----PF 288
Query: 361 SAPLAGLNASNPLAAALPQL 380
S PLA A L AA P L
Sbjct: 289 SPPLAPSPALTALPAAPPGL 308
>gi|119585581|gb|EAW65177.1| poly(rC) binding protein 4, isoform CRA_f [Homo sapiens]
Length = 244
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 122/183 (66%), Gaps = 7/183 (3%)
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
SG GG+ + P + T +R +M GKEVGSIIGK GETVK++RE+S ++I IS+
Sbjct: 2 SGSDGGLEEEPELSITLT------LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
S PERI T+ GS ++F A S+I ++E + GGN + LRL++PASQCG
Sbjct: 56 GSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCG 114
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+ + QIC ++++
Sbjct: 115 SLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILEVL 174
Query: 598 PKG 600
P G
Sbjct: 175 PWG 177
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG 155
PNSTER V + GVPDA+ + QIC ++++ P G
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILEVLPWG 177
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
P+ N + +T + +P G++IGK GTKI EIR+ +GA +++ + + +S +R
Sbjct: 91 PANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTER 148
Query: 311 TITMTGTPDAIALA-QYLINMSVELL 335
+T++G PDAI L + + + +E+L
Sbjct: 149 AVTVSGVPDAIILCVRQICAVILEVL 174
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
P+ N + +T + +P G++IGK GTKI EIR+ +GA +++ + + +S +R
Sbjct: 91 PANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTER 148
Query: 756 TITMTGTPDAIALA-QYLINMSVELL 780
+T++G PDAI L + + + +E+L
Sbjct: 149 AVTVSGVPDAIILCVRQICAVILEVL 174
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQI 144
A+ I
Sbjct: 75 AVSMI 79
>gi|148689196|gb|EDL21143.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689197|gb|EDL21144.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689198|gb|EDL21145.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
Length = 244
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 128/200 (64%), Gaps = 14/200 (7%)
Query: 422 GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP 481
G+ +GP + T +R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S P
Sbjct: 6 AGLEEGPELSITLT------LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP 59
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
ERI T+ GS ++F A S+I ++E + GG+ + LRL++PASQCGS+IG
Sbjct: 60 ERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIG 118
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
K G++IK IRET+GA V VA D+LPNSTER V + GVPDA+ + QIC ++++ P
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILEHHP--- 175
Query: 602 TIPYRPLPQNA---GGPGLI 618
+ PLP+ G PG +
Sbjct: 176 -VSSEPLPRYCPPLGQPGFL 194
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 118/176 (67%), Gaps = 8/176 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA---GGPGLI 173
PNSTER V + GVPDA+ + QIC ++++ P + PLP+ G PG +
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILEHHP----VSSEPLPRYCPPLGQPGFL 194
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +P G++IGK GTKI EIR+ +GA +++ + + +S +R +T++G PDAI
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDAI 159
Query: 322 ALA 324
L
Sbjct: 160 ILC 162
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +P G++IGK GTKI EIR+ +GA +++ + + +S +R +T++G PDAI
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDAI 159
Query: 767 ALA 769
L
Sbjct: 160 ILC 162
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQI 144
A+ I
Sbjct: 75 AVSMI 79
>gi|9931474|gb|AAG02184.1|AF257770_1 RNA binding protein MCG10 [Homo sapiens]
gi|9931478|gb|AAG02186.1| RNA binding protein MCG10 [Homo sapiens]
gi|119585569|gb|EAW65165.1| poly(rC) binding protein 4, isoform CRA_a [Homo sapiens]
gi|119585574|gb|EAW65170.1| poly(rC) binding protein 4, isoform CRA_a [Homo sapiens]
Length = 424
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 190/408 (46%), Gaps = 107/408 (26%)
Query: 20 LREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL 79
L +S ++I IS+ S PERI T+ GS ++F A S+I ++E + GGN
Sbjct: 9 LYLQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPP 67
Query: 80 IQLRLIVPASQCGSIIGKGGS---QIKTIR------------------------------ 106
+ LRL++PASQCGS+IGK G+ +I+ +R
Sbjct: 68 VTLRLVIPASQCGSLIGKAGTKIKEIREVRGEIYHPQGIRGKGAVVRGVLGLWRPPHLES 127
Query: 107 ----------------------ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
+T+GA V VA D+LPNSTER V + GVPDA+ + QI
Sbjct: 128 SEPGQPFSGLWEQPEVAPVLCLQTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 187
Query: 145 CLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGG 204
C ++++SPPKGATIPY P + L+ A N G
Sbjct: 188 CAVILESPPKGATIPYHP-------------SLSLGTVLLSA----NQ-----------G 219
Query: 205 NSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 264
S G G + A + L QL ++ +P + P +T+ Q
Sbjct: 220 FSVQGQYGAVTPAEVTKL--QQLSSHAVPFATPSVVPGLD------PGTQTSSQ------ 265
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALA
Sbjct: 266 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALA 322
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
QYLI +E ++ GG S+ +D P S PL L + P
Sbjct: 323 QYLITACLETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 364
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 190/408 (46%), Gaps = 107/408 (26%)
Query: 465 LREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL 524
L +S ++I IS+ S PERI T+ GS ++F A S+I ++E + GGN
Sbjct: 9 LYLQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPP 67
Query: 525 IQLRLIVPASQCGSIIGKGGS---QIKTIR------------------------------ 551
+ LRL++PASQCGS+IGK G+ +I+ +R
Sbjct: 68 VTLRLVIPASQCGSLIGKAGTKIKEIREVRGEIYHPQGIRGKGAVVRGVLGLWRPPHLES 127
Query: 552 ----------------------ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+T+GA V VA D+LPNSTER V + GVPDA+ + QI
Sbjct: 128 SEPGQPFSGLWEQPEVAPVLCLQTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 187
Query: 590 CLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGG 649
C ++++SPPKGATIPY P + L+ A N G
Sbjct: 188 CAVILESPPKGATIPYHP-------------SLSLGTVLLSA----NQ-----------G 219
Query: 650 NSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 709
S G G + A + L QL ++ +P + P +T+ Q
Sbjct: 220 FSVQGQYGAVTPAEVTKL--QQLSSHAVPFATPSVVPGLD------PGTQTSSQ------ 265
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALA
Sbjct: 266 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALA 322
Query: 770 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
QYLI +E ++ GG S+ +D P S PL L + P
Sbjct: 323 QYLITACLETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 364
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 119/175 (68%), Gaps = 14/175 (8%)
Query: 420 GFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS 479
G GG P+ + T +R +M GKE+GSIIGK GETVK++RE+S ++I IS+ S
Sbjct: 9 GVGGSPEETELSITLT------LRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGS 62
Query: 480 TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQ---LIQLRLIVPASQC 536
PERI T+ GS D++FRA S+I +EE + GG+G S + LRL++PASQC
Sbjct: 63 CPERITTITGSTDAVFRAVSMIAFKLEE-----DLGAGGDGVSAGRAPVTLRLVIPASQC 117
Query: 537 GSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICL 591
GS+IGK G++I+ IRE++GA V VA D+LPNSTER V + GVPD + Q + QICL
Sbjct: 118 GSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSGVPDTIIQCVRQICL 172
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 109/149 (73%), Gaps = 8/149 (5%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKE+GSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS D++FRA S+I +
Sbjct: 29 MHGKEIGSIIGKKGETVKRIREQSTARITISEGSCPERITTITGSTDAVFRAVSMIAFKL 88
Query: 61 EEFHKNQNKHLGGNGESQ---LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
EE + GG+G S + LRL++PASQCGS+IGK G++I+ IRE++GA V VA
Sbjct: 89 EE-----DLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAG 143
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICL 146
D+LPNSTER V + GVPD + Q + QICL
Sbjct: 144 DLLPNSTERAVTVSGVPDTIIQCVRQICL 172
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 47/259 (18%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G DAV +
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGSCP---ERITTITGSTDAVFR 79
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 199
A+ I + + AGG G+ + + L+ P L G A
Sbjct: 80 AVSMIAFKLEED-------------LGAGGDGVSAGRAPVTLRLV-IPASQCGSLIGKA- 124
Query: 200 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQN---------QHNRNNRDG 250
G + + A Q+ + +P + + Q R
Sbjct: 125 -----------GAKIREIRESTGAQVQVAGDLLPNSTERAVTVSGVPDTIIQCVRQICLD 173
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
PS +++ Q E VPN+LIG +IG+ G+KI EIR++SGA I+I + E S++R
Sbjct: 174 PSSQSSSQ------EFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGN---QTEGSSER 224
Query: 311 TITMTGTPDAIALAQYLIN 329
+T+TGTP +I LAQYLI
Sbjct: 225 HVTITGTPVSITLAQYLIT 243
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 47/259 (18%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G DAV +
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGSCP---ERITTITGSTDAVFR 79
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 644
A+ I + + AGG G+ + + L+ P L G A
Sbjct: 80 AVSMIAFKLEED-------------LGAGGDGVSAGRAPVTLRLV-IPASQCGSLIGKA- 124
Query: 645 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQN---------QHNRNNRDG 695
G + + A Q+ + +P + + Q R
Sbjct: 125 -----------GAKIREIRESTGAQVQVAGDLLPNSTERAVTVSGVPDTIIQCVRQICLD 173
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
PS +++ Q E VPN+LIG +IG+ G+KI EIR++SGA I+I + E S++R
Sbjct: 174 PSSQSSSQ------EFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGN---QTEGSSER 224
Query: 756 TITMTGTPDAIALAQYLIN 774
+T+TGTP +I LAQYLI
Sbjct: 225 HVTITGTPVSITLAQYLIT 243
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G ++++RE +G+++ ++ P ER VTV G D++ +
Sbjct: 108 LRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSGVPDTIIQCV 167
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
I + +Q +VP G IIG+ GS+I IR+ SGA +
Sbjct: 168 RQICLDPSSQSSSQE---------------FLVPNDLIGCIIGRHGSKISEIRQMSGAHI 212
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ + S+ER V I G P ++T A Y I
Sbjct: 213 KIG-NQTEGSSERHVTITGTPVSITLAQYLI 242
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ GS+IGK+G ++++RE +G+++ ++ P ER VTV G D++ + I +
Sbjct: 116 QCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSGVPDTIIQCVRQICLDPS 175
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+Q +VP G IIG+ GS+I IR+ SGA + + +
Sbjct: 176 SQSSSQE---------------FLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIG-NQTE 219
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
S+ER V I G P ++T A Y I
Sbjct: 220 GSSERHVTITGTPVSITLAQYLI 242
>gi|291575150|ref|NP_065151.2| poly(rC)-binding protein 4 isoform a [Homo sapiens]
gi|114587204|ref|XP_001170813.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan troglodytes]
gi|16877720|gb|AAH17098.1| PCBP4 protein [Homo sapiens]
gi|119585570|gb|EAW65166.1| poly(rC) binding protein 4, isoform CRA_b [Homo sapiens]
Length = 360
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 188/401 (46%), Gaps = 103/401 (25%)
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
SG GG+ + P + + +R +M GKEVGSIIGK GETVK++RE+S ++I IS+
Sbjct: 2 SGSDGGLEEEPELS------ITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
S PERI T+ GS ++F A S+I ++E + GGN + LRL++PASQCG
Sbjct: 56 GSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCG 114
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IGK G++IK IRE SP
Sbjct: 115 SLIGKAGTKIKEIRE-------------------------------------------SP 131
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
PKGATIPY P SL L + L N G + G
Sbjct: 132 PKGATIPYHP-------------------SL------------SLGTVLLSANQGFSVQG 160
Query: 658 GLNAAALAALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
A A + QL ++ +P + P +T+ Q E VPN+
Sbjct: 161 QYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD------PGTQTSSQ------EFLVPND 208
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALAQYLI
Sbjct: 209 LIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALAQYLITAC 265
Query: 777 VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+E ++ GG S+ +D P S PL L + P
Sbjct: 266 LETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 300
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 176/373 (47%), Gaps = 97/373 (26%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------- 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
SPPKGATIPY P
Sbjct: 130 ------------------------------SPPKGATIPYHP------------------ 141
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS-SQLKTNHMPRNQNQN 239
SL L + L N G + G A A + QL ++ +P
Sbjct: 142 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSV 188
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 189 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 236
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D P
Sbjct: 237 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---ADLPAP 287
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 288 FSPPLTALPTAPP 300
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 33/214 (15%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA-- 497
+R ++ + GS+IGK+G +K++RE G+ I S + + TV+ S + F
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQG 160
Query: 498 -FSLITKNIEEFHKNQNKHL----------GGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
+ +T + + H G + +Q +VP G +IG+ GS+
Sbjct: 161 QYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSK 220
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DS 596
I IR+ SGA + + + + ER V I G P ++ A Y I CL S
Sbjct: 221 ISEIRQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSS 279
Query: 597 PPKGATIPYRPLPQNA---GGPGLIGNQFGMQNS 627
P P+ P P A PGL+G + + S
Sbjct: 280 APADLPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 33/206 (16%)
Query: 5 EVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA---FSLITKN 59
+ GS+IGK+G +K++RE G+ I S + + TV+ S + F + +T
Sbjct: 112 QCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQGQYGAVTPA 168
Query: 60 IEEFHKNQNKHL----------GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
+ + H G + +Q +VP G +IG+ GS+I IR+ S
Sbjct: 169 EVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMS 228
Query: 110 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIP 159
GA + + + + ER V I G P ++ A Y I CL S P P
Sbjct: 229 GAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAP 287
Query: 160 YRPLPQNA---GGPGLIGNQFGMQNS 182
+ P P A PGL+G + + S
Sbjct: 288 FSP-PLTALPTAPPGLLGTPYAISLS 312
>gi|301767224|ref|XP_002919001.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
Length = 360
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 176/376 (46%), Gaps = 95/376 (25%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 80 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE--------- 129
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
SPPKGATIPY P
Sbjct: 130 ----------------------------------SPPKGATIPYHP-------------- 141
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
SL L + L N G + G A A + Q + H
Sbjct: 142 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 184
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ + D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 185 SPSMVP----GLDPGAQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 233
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 234 IGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDL 284
Query: 802 NLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 285 PAPFSPPLTALPTAPP 300
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 173/372 (46%), Gaps = 95/372 (25%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------- 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
SPPKGATIPY P
Sbjct: 130 ------------------------------SPPKGATIPYHP------------------ 141
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
SL L + L N G + G A A + Q + H + +
Sbjct: 142 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 188
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 189 VP----GLDPGAQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 236
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 237 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDLPAPF 288
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 289 SPPLTALPTAPP 300
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 41/218 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA-- 497
+R ++ + GS+IGK+G +K++RE G+ I S + + TV+ S + F
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQG 160
Query: 498 -FSLITKNIEEFHKNQNKHLGGNGE--------------SQLIQLRLIVPASQCGSIIGK 542
+ +T E K Q L G+ +Q +VP G +IG+
Sbjct: 161 QYGAVTP--AEVTKLQ--QLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGR 216
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVD----- 595
GS+I IR+ SGA + + + + ER V I G P ++ A Y I CL
Sbjct: 217 QGSKISEIRQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGG 275
Query: 596 ---SPPKGATIPYRPLPQNA---GGPGLIGNQFGMQNS 627
S P P+ P P A PGL+G + + S
Sbjct: 276 TPGSAPTDLPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 41/210 (19%)
Query: 5 EVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA---FSLITKN 59
+ GS+IGK+G +K++RE G+ I S + + TV+ S + F + +T
Sbjct: 112 QCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQGQYGAVTP- 167
Query: 60 IEEFHKNQNKHLGGNGE--------------SQLIQLRLIVPASQCGSIIGKGGSQIKTI 105
E K Q L G+ +Q +VP G +IG+ GS+I I
Sbjct: 168 -AEVTKLQ--QLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEI 224
Query: 106 RETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKG 155
R+ SGA + + + + ER V I G P ++ A Y I CL S P
Sbjct: 225 RQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTD 283
Query: 156 ATIPYRPLPQNA---GGPGLIGNQFGMQNS 182
P+ P P A PGL+G + + S
Sbjct: 284 LPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
>gi|410951301|ref|XP_003982336.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Felis catus]
Length = 360
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 176/376 (46%), Gaps = 95/376 (25%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 80 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE--------- 129
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
SPPKGATIPY P
Sbjct: 130 ----------------------------------SPPKGATIPYHP-------------- 141
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
SL L + L N G + G A A + Q + H
Sbjct: 142 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 184
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ + D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 185 SPSMVP----GLDPGTQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 233
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 234 IGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDL 284
Query: 802 NLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 285 PAPFSPPLTALPTAPP 300
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 173/372 (46%), Gaps = 95/372 (25%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------- 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
SPPKGATIPY P
Sbjct: 130 ------------------------------SPPKGATIPYHP------------------ 141
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
SL L + L N G + G A A + Q + H + +
Sbjct: 142 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 188
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 189 VP----GLDPGTQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 236
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 237 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDLPAPF 288
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 289 SPPLTALPTAPP 300
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 41/218 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA-- 497
+R ++ + GS+IGK+G +K++RE G+ I S + + TV+ S + F
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQG 160
Query: 498 -FSLITKNIEEFHKNQNKHLGGNGE--------------SQLIQLRLIVPASQCGSIIGK 542
+ +T E K Q L G+ +Q +VP G +IG+
Sbjct: 161 QYGAVTP--AEVTKLQ--QLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGR 216
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVD----- 595
GS+I IR+ SGA + + + + ER V I G P ++ A Y I CL
Sbjct: 217 QGSKISEIRQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGG 275
Query: 596 ---SPPKGATIPYRPLPQNA---GGPGLIGNQFGMQNS 627
S P P+ P P A PGL+G + + S
Sbjct: 276 TPGSAPTDLPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 41/210 (19%)
Query: 5 EVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA---FSLITKN 59
+ GS+IGK+G +K++RE G+ I S + + TV+ S + F + +T
Sbjct: 112 QCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQGQYGAVTP- 167
Query: 60 IEEFHKNQNKHLGGNGE--------------SQLIQLRLIVPASQCGSIIGKGGSQIKTI 105
E K Q L G+ +Q +VP G +IG+ GS+I I
Sbjct: 168 -AEVTKLQ--QLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEI 224
Query: 106 RETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKG 155
R+ SGA + + + + ER V I G P ++ A Y I CL S P
Sbjct: 225 RQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTD 283
Query: 156 ATIPYRPLPQNA---GGPGLIGNQFGMQNS 182
P+ P P A PGL+G + + S
Sbjct: 284 LPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
>gi|348581995|ref|XP_003476762.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Cavia porcellus]
Length = 360
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 177/377 (46%), Gaps = 97/377 (25%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 80 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE--------- 129
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
SPPKGATIPY P
Sbjct: 130 ----------------------------------SPPKGATIPYHP-------------- 141
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 142 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 184
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ P+ +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 185 SPSVVPGLD------PAAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 232
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R IT+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 233 KIGN---QAEGAGERHITITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PAD 283
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 284 LPAPFSPPLTALPTAPP 300
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 174/373 (46%), Gaps = 97/373 (26%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------- 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
SPPKGATIPY P
Sbjct: 130 ------------------------------SPPKGATIPYHP------------------ 141
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 142 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 188
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P+ +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 189 VPGLD------PAAQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 236
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R IT+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 237 ---QAEGAGERHITITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPAP 287
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 288 FSPPLTALPTAPP 300
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 33/214 (15%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA-- 497
+R ++ + GS+IGK+G +K++RE G+ I S + + TV+ S + F
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQG 160
Query: 498 -FSLITKNIEEFHKNQNKHL----------GGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
+ +T + + H G + +Q +VP G +IG+ GS+
Sbjct: 161 QYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSK 220
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------S 596
I IR+ SGA + + + + ER + I G P ++ A Y I CL S
Sbjct: 221 ISEIRQMSGAHIKIG-NQAEGAGERHITITGSPVSIALAQYLITACLETAKSTSGGTPGS 279
Query: 597 PPKGATIPYRPLPQNA---GGPGLIGNQFGMQNS 627
P P+ P P A PGL+G + + S
Sbjct: 280 APADLPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 33/210 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA---FSL 55
+ + GS+IGK+G +K++RE G+ I S + + TV+ S + F +
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQGQYGA 164
Query: 56 ITKNIEEFHKNQNKHL----------GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTI 105
+T + + H G + +Q +VP G +IG+ GS+I I
Sbjct: 165 VTPAEVTKLQQLSGHAVPFASPSVVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKISEI 224
Query: 106 RETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKG 155
R+ SGA + + + + ER + I G P ++ A Y I CL S P
Sbjct: 225 RQMSGAHIKIG-NQAEGAGERHITITGSPVSIALAQYLITACLETAKSTSGGTPGSAPAD 283
Query: 156 ATIPYRPLPQNA---GGPGLIGNQFGMQNS 182
P+ P P A PGL+G + + S
Sbjct: 284 LPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
>gi|426340777|ref|XP_004034304.1| PREDICTED: poly(rC)-binding protein 4 isoform 4 [Gorilla gorilla
gorilla]
Length = 360
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 187/401 (46%), Gaps = 103/401 (25%)
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
SG GG+ + P + + +R +M GKEVGSIIGK GETVK++RE+S ++I IS+
Sbjct: 2 SGSDGGLEEEPELS------ITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
S PERI T+ GS ++F A S+I ++E + GGN + LRL++PASQCG
Sbjct: 56 GSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCG 114
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IGK G++IK IRE SP
Sbjct: 115 SLIGKAGTKIKEIRE-------------------------------------------SP 131
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
PKGATIPY P SL L + L N G + G
Sbjct: 132 PKGATIPYHP-------------------SL------------SLGTVLLSANQGFSVQG 160
Query: 658 GLNAAALAALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
A + QL ++ +P + P +T+ Q E VPN+
Sbjct: 161 QYGAVTPTEVTKLQQLSSHAVPFATPSVVPGLD------PGTQTSSQ------EFLVPND 208
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALAQYLI
Sbjct: 209 LIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALAQYLITAC 265
Query: 777 VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+E ++ GG S+ +D P S PL L + P
Sbjct: 266 LETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 300
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 175/373 (46%), Gaps = 97/373 (26%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------- 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
SPPKGATIPY P
Sbjct: 130 ------------------------------SPPKGATIPYHP------------------ 141
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS-SQLKTNHMPRNQNQN 239
SL L + L N G + G A + QL ++ +P
Sbjct: 142 -SL------------SLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFATPSV 188
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 189 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 236
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D P
Sbjct: 237 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---ADLPAP 287
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 288 FSPPLTALPTAPP 300
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 33/214 (15%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA-- 497
+R ++ + GS+IGK+G +K++RE G+ I S + + TV+ S + F
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQG 160
Query: 498 -FSLITKNIEEFHKNQNKHL----------GGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
+ +T + + H G + +Q +VP G +IG+ GS+
Sbjct: 161 QYGAVTPTEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSK 220
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DS 596
I IR+ SGA + + + + ER V I G P ++ A Y I CL S
Sbjct: 221 ISEIRQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSS 279
Query: 597 PPKGATIPYRPLPQNA---GGPGLIGNQFGMQNS 627
P P+ P P A PGL+G + + S
Sbjct: 280 APADLPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 33/206 (16%)
Query: 5 EVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA---FSLITKN 59
+ GS+IGK+G +K++RE G+ I S + + TV+ S + F + +T
Sbjct: 112 QCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQGQYGAVTPT 168
Query: 60 IEEFHKNQNKHL----------GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
+ + H G + +Q +VP G +IG+ GS+I IR+ S
Sbjct: 169 EVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMS 228
Query: 110 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIP 159
GA + + + + ER V I G P ++ A Y I CL S P P
Sbjct: 229 GAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAP 287
Query: 160 YRPLPQNA---GGPGLIGNQFGMQNS 182
+ P P A PGL+G + + S
Sbjct: 288 FSP-PLTALPTAPPGLLGTPYAISLS 312
>gi|335299140|ref|XP_003358506.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Sus scrofa]
Length = 360
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 178/376 (47%), Gaps = 95/376 (25%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 80 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE--------- 129
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
SPPKGATIPY P
Sbjct: 130 ----------------------------------SPPKGATIPYHP-------------- 141
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
SL L + L N G + G A A + Q + H
Sbjct: 142 -----SL------------SLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 184
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ + D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 185 SPSMVP----GLDPGTQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 233
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D
Sbjct: 234 IGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---TDL 284
Query: 802 NLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 285 PAPFSPPLTALPTAPP 300
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 175/372 (47%), Gaps = 95/372 (25%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------- 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
SPPKGATIPY P
Sbjct: 130 ------------------------------SPPKGATIPYHP------------------ 141
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
SL L + L N G + G A A + Q + H + +
Sbjct: 142 -SL------------SLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 188
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 189 VP----GLDPGTQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 236
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D P
Sbjct: 237 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---TDLPAPF 288
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 289 SPPLTALPTAPP 300
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 41/218 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA-- 497
+R ++ + GS+IGK+G +K++RE G+ I S + + TV+ S + F
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSTNQGFSVQG 160
Query: 498 -FSLITKNIEEFHKNQNKHLGGNGE--------------SQLIQLRLIVPASQCGSIIGK 542
+ +T E K Q L G+ +Q +VP G +IG+
Sbjct: 161 QYGAVTP--AEVTKLQ--QLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGR 216
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMV------ 594
GS+I IR+ SGA + + + + ER V I G P ++ A Y I CL
Sbjct: 217 QGSKISEIRQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGG 275
Query: 595 --DSPPKGATIPYRPLPQNA---GGPGLIGNQFGMQNS 627
S P P+ P P A PGL+G + + S
Sbjct: 276 TPSSAPTDLPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 41/210 (19%)
Query: 5 EVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA---FSLITKN 59
+ GS+IGK+G +K++RE G+ I S + + TV+ S + F + +T
Sbjct: 112 QCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSTNQGFSVQGQYGAVTP- 167
Query: 60 IEEFHKNQNKHLGGNGE--------------SQLIQLRLIVPASQCGSIIGKGGSQIKTI 105
E K Q L G+ +Q +VP G +IG+ GS+I I
Sbjct: 168 -AEVTKLQ--QLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEI 224
Query: 106 RETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKG 155
R+ SGA + + + + ER V I G P ++ A Y I CL S P
Sbjct: 225 RQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPTD 283
Query: 156 ATIPYRPLPQNA---GGPGLIGNQFGMQNS 182
P+ P P A PGL+G + + S
Sbjct: 284 LPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
>gi|149018652|gb|EDL77293.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018654|gb|EDL77295.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018655|gb|EDL77296.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018656|gb|EDL77297.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018658|gb|EDL77299.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018659|gb|EDL77300.1| rCG25644, isoform CRA_a [Rattus norvegicus]
Length = 183
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 112/156 (71%), Gaps = 1/156 (0%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
D+LPNSTER V + GVPDA+ + QIC ++++ P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILEEP 174
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 109/152 (71%), Gaps = 1/152 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
PNSTER V + GVPDA+ + QIC ++++ P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILEEP 174
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +P G++IGK GTKI EIR+ +GA +++ + + +S +R +T++G PDAI
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDAI 159
Query: 322 ALA 324
L
Sbjct: 160 ILC 162
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +P G++IGK GTKI EIR+ +GA +++ + + +S +R +T++G PDAI
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV--AGDLLPNSTERAVTVSGVPDAI 159
Query: 767 ALA 769
L
Sbjct: 160 ILC 162
>gi|338714774|ref|XP_003363150.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Equus
caballus]
Length = 360
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/376 (33%), Positives = 176/376 (46%), Gaps = 95/376 (25%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 80 AFKLDEDLCAAPTN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE--------- 129
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
SPPKGATIPY P
Sbjct: 130 ----------------------------------SPPKGATIPYHP-------------- 141
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
SL L + L N G + G A A + Q + H
Sbjct: 142 -----SL------------SLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFA 184
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
+ + D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+
Sbjct: 185 SPSMVP----GLDPGAQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 233
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 234 IGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGST------PTDL 284
Query: 802 NLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 285 PAPFSPPLTALPTAPP 300
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 173/372 (46%), Gaps = 95/372 (25%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRE
Sbjct: 84 DEDLCAAPTN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------- 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
SPPKGATIPY P
Sbjct: 130 ------------------------------SPPKGATIPYHP------------------ 141
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
SL L + L N G + G A A + Q + H + +
Sbjct: 142 -SL------------SLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFASPSM 188
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
D +Q ++Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 189 VP----GLDPGAQTSSQ-------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN- 236
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 237 --QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGST------PTDLPAPF 288
Query: 361 SAPLAGLNASNP 372
S PL L + P
Sbjct: 289 SPPLTALPTAPP 300
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 41/218 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA-- 497
+R ++ + GS+IGK+G +K++RE G+ I S + + TV+ S + F
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQG 160
Query: 498 -FSLITKNIEEFHKNQNKHLGGNGE--------------SQLIQLRLIVPASQCGSIIGK 542
+ +T E K Q L G+ +Q +VP G +IG+
Sbjct: 161 QYGAVTS--AEVTKLQ--QLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGR 216
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVD----- 595
GS+I IR+ SGA + + + + ER V I G P ++ A Y I CL
Sbjct: 217 QGSKISEIRQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGG 275
Query: 596 ---SPPKGATIPYRPLPQNA---GGPGLIGNQFGMQNS 627
S P P+ P P A PGL+G + + S
Sbjct: 276 TPGSTPTDLPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 41/210 (19%)
Query: 5 EVGSIIGKSGETVKKLREE--SGSKIYISDSSTPERIVTVIGSMDSLFRA---FSLITKN 59
+ GS+IGK+G +K++RE G+ I S + + TV+ S + F + +T
Sbjct: 112 QCGSLIGKAGTKIKEIRESPPKGATIPYHPSLS---LGTVLLSANQGFSVQGQYGAVTS- 167
Query: 60 IEEFHKNQNKHLGGNGE--------------SQLIQLRLIVPASQCGSIIGKGGSQIKTI 105
E K Q L G+ +Q +VP G +IG+ GS+I I
Sbjct: 168 -AEVTKLQ--QLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEI 224
Query: 106 RETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKG 155
R+ SGA + + + + ER V I G P ++ A Y I CL S P
Sbjct: 225 RQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSTPTD 283
Query: 156 ATIPYRPLPQNA---GGPGLIGNQFGMQNS 182
P+ P P A PGL+G + + S
Sbjct: 284 LPAPFSP-PLTALPTAPPGLLGTPYAISLS 312
>gi|196049606|pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 115/155 (74%), Gaps = 1/155 (0%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I
Sbjct: 7 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMI 66
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA
Sbjct: 67 IDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA 125
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
DMLPNSTER + I G+P ++ + + QIC++M+++
Sbjct: 126 GDMLPNSTERAITIAGIPQSIIECVKQICVVMLET 160
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 11 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 70
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 71 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
PNSTER + I G+P ++ + + QIC++M+++
Sbjct: 130 PNSTERAITIAGIPQSIIECVKQICVVMLET 160
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 89 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 146
Query: 322 --ALAQYLINM 330
+ Q + M
Sbjct: 147 IECVKQICVVM 157
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 89 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 146
Query: 767 --ALAQYLINM 775
+ Q + M
Sbjct: 147 IECVKQICVVM 157
>gi|358252903|dbj|GAA50475.1| poly(rC)-binding protein 2/3/4 [Clonorchis sinensis]
Length = 859
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 123/195 (63%), Gaps = 26/195 (13%)
Query: 428 PNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV 487
P + N QT + R+ +M GKEVGSIIGK GE VKK REESG++I ISD S+PERIVT+
Sbjct: 190 PVHPNPQTFVLIVRL--LMSGKEVGSIIGKRGENVKKYREESGARINISDGSSPERIVTI 247
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ--LRLIVPASQCGSIIGKGGS 545
G+ + + AF+L+++ E+ Q LR+ A+QCGSIIGKGGS
Sbjct: 248 TGTTEQISVAFTLMSQKFED---------------DFTQGLLRM---ATQCGSIIGKGGS 289
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
+IK +RE +GAS+ VAS+ LP STER V I G A+++ + +C I VDSP KG IPY
Sbjct: 290 RIKEVRELTGASIQVASEALPASTERTVTISGAAKAISKCVRHLCDIFVDSPAKGPVIPY 349
Query: 606 RPLP----QNAGGPG 616
RP P QN PG
Sbjct: 350 RPKPAFTSQNMTCPG 364
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 114/177 (64%), Gaps = 24/177 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE VKK REESG++I ISD S+PERIVT+ G+ + + AF+L+++
Sbjct: 206 MSGKEVGSIIGKRGENVKKYREESGARINISDGSSPERIVTITGTTEQISVAFTLMSQKF 265
Query: 61 EEFHKNQNKHLGGNGESQLIQ--LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
E+ Q LR+ A+QCGSIIGKGGS+IK +RE +GAS+ VAS+
Sbjct: 266 ED---------------DFTQGLLRM---ATQCGSIIGKGGSRIKEVRELTGASIQVASE 307
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP----QNAGGPG 171
LP STER V I G A+++ + +C I VDSP KG IPYRP P QN PG
Sbjct: 308 ALPASTERTVTISGAAKAISKCVRHLCDIFVDSPAKGPVIPYRPKPAFTSQNMTCPG 364
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 314
T + +T+E+ + NELIG +IG+GGT + EIR IS A I+IS E+ + +R IT+
Sbjct: 666 TTTTEEPVTRELIISNELIGCIIGRGGTTVNEIRNISKAQIKISNC---EDGAKERKITL 722
Query: 315 TGTPDAIALAQYLINMSV 332
+G A+ LAQ+LIN S+
Sbjct: 723 SGPMQAVNLAQFLINNSI 740
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 700 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 759
T + +T+E+ + NELIG +IG+GGT + EIR IS A I+IS E+ + +R IT+
Sbjct: 666 TTTTEEPVTRELIISNELIGCIIGRGGTTVNEIRNISKAQIKISNC---EDGAKERKITL 722
Query: 760 TGTPDAIALAQYLINMSV 777
+G A+ LAQ+LIN S+
Sbjct: 723 SGPMQAVNLAQFLINNSI 740
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA-LAQYLINMS 331
G++IGKGG++I E+R+++GA I++ +SE S +RT+T++G AI+ ++L ++
Sbjct: 280 CGSIIGKGGSRIKEVRELTGASIQV--ASEALPASTERTVTISGAAKAISKCVRHLCDIF 337
Query: 332 VE 333
V+
Sbjct: 338 VD 339
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA-LAQYLINMS 776
G++IGKGG++I E+R+++GA I++ +SE S +RT+T++G AI+ ++L ++
Sbjct: 280 CGSIIGKGGSRIKEVRELTGASIQV--ASEALPASTERTVTISGAAKAISKCVRHLCDIF 337
Query: 777 VE 778
V+
Sbjct: 338 VD 339
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
N ++ ++ +RL++ + GSIIGK G +K RE SGA + ++ +S ER V I G
Sbjct: 194 NPQTFVLIVRLLMSGKEVGSIIGKRGENVKKYREESGARINISDG---SSPERIVTITGT 250
Query: 134 PDAVTQAI 141
+ ++ A
Sbjct: 251 TEQISVAF 258
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G++IGK G + + R+ SGA I IS S E R +T+TGT + I++A L++
Sbjct: 211 VGSIIGKRGENVKKYREESGARINISDGSSPE-----RIVTITGTTEQISVAFTLMSQKF 265
Query: 333 E 333
E
Sbjct: 266 E 266
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+G++IGK G + + R+ SGA I IS S E R +T+TGT + I++A L++
Sbjct: 211 VGSIIGKRGENVKKYREESGARINISDGSSPE-----RIVTITGTTEQISVAFTLMSQKF 265
Query: 778 E 778
E
Sbjct: 266 E 266
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 181/340 (53%), Gaps = 34/340 (10%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKN 504
+++ KE G IIGK G +K RE+S ++I ISD S PERIVTV G +D++ +AF LI +
Sbjct: 51 LVEQKEAGRIIGKGGAKIKSFREQSTARINISDGSLPERIVTVNGPIDAVCKAFKLICQK 110
Query: 505 IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 564
++E + N + I+ L++P C SIIGKGG +K IRE++GA V +AS++
Sbjct: 111 LDEDFRIIN---NSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQVSIASNV 167
Query: 565 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 624
LPNS++R + I G A+++ I ++ ++ + P G +PY+P P N Q G
Sbjct: 168 LPNSSDRVMTITGSSSAISKCIQRLSQLLSEL-PLGQHVPYQPKPPNVPPTAF---QNGQ 223
Query: 625 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 684
+ L A G P+ A L G + + + +P QN
Sbjct: 224 VHELTFAVP-GPFPIPPHAQLPYG-------------PPVPVITQIAPYSVDIPSIVTQN 269
Query: 685 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
+ + S T+ + +P++LIG +IG+GG KI EIR+ISGA I+I
Sbjct: 270 FSAMSNGGTFARS----------TQLLKIPHDLIGCIIGRGGVKINEIRQISGANIKI-- 317
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
+ D+ R +T++GTP++I+ AQYLI+ S + L +
Sbjct: 318 -ASPNGDTTGRQVTISGTPESISAAQYLISQSYKGLHVCI 356
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 180/339 (53%), Gaps = 34/339 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
++ KE G IIGK G +K RE+S ++I ISD S PERIVTV G +D++ +AF LI + +
Sbjct: 52 VEQKEAGRIIGKGGAKIKSFREQSTARINISDGSLPERIVTVNGPIDAVCKAFKLICQKL 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + N + I+ L++P C SIIGKGG +K IRE++GA V +AS++L
Sbjct: 112 DEDFRIIN---NSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQVSIASNVL 168
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNS++R + I G A+++ I ++ ++ + P G +PY+P P N Q G
Sbjct: 169 PNSSDRVMTITGSSSAISKCIQRLSQLLSEL-PLGQHVPYQPKPPNVPPTAF---QNGQV 224
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
+ L A G P+ A L G + + + +P QN
Sbjct: 225 HELTFAVP-GPFPIPPHAQLPYG-------------PPVPVITQIAPYSVDIPSIVTQNF 270
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ + S T+ + +P++LIG +IG+GG KI EIR+ISGA I+I
Sbjct: 271 SAMSNGGTFARS----------TQLLKIPHDLIGCIIGRGGVKINEIRQISGANIKI--- 317
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
+ D+ R +T++GTP++I+ AQYLI+ S + L +
Sbjct: 318 ASPNGDTTGRQVTISGTPESISAAQYLISQSYKGLHVCI 356
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 85 IVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
+V + G IIGKGG++IK+ RE S A + ++ LP ER V + G DAV +A I
Sbjct: 51 LVEQKEAGRIIGKGGAKIKSFREQSTARINISDGSLP---ERIVTVNGPIDAVCKAFKLI 107
Query: 145 C 145
C
Sbjct: 108 C 108
>gi|402590061|gb|EJW83992.1| hypothetical protein WUBG_05097, partial [Wuchereria bancrofti]
Length = 210
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 115/160 (71%), Gaps = 4/160 (2%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
EVGSIIGK G+ +K +R++SG+KI ISD S PERIVT+ GS+ ++ +AF +I +++
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSIGTINKAFGMICAKLQQ-- 58
Query: 65 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 124
+ L + I +RLIVPA+QCG IIGKGG++IK IRE +GAS+ VAS+MLP+ST
Sbjct: 59 --DLQALPNSIPKPPITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPSST 116
Query: 125 EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
ER V I G D++ + IC I++++PPKG T+PYRP P
Sbjct: 117 ERAVTISGSADSIVDCMRNICQILLEAPPKGNTLPYRPKP 156
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 115/160 (71%), Gaps = 4/160 (2%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
EVGSIIGK G+ +K +R++SG+KI ISD S PERIVT+ GS+ ++ +AF +I +++
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSIGTINKAFGMICAKLQQ-- 58
Query: 510 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 569
+ L + I +RLIVPA+QCG IIGKGG++IK IRE +GAS+ VAS+MLP+ST
Sbjct: 59 --DLQALPNSIPKPPITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPSST 116
Query: 570 EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
ER V I G D++ + IC I++++PPKG T+PYRP P
Sbjct: 117 ERAVTISGSADSIVDCMRNICQILLEAPPKGNTLPYRPKP 156
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G +IGKGGTKI EIR+ +GA I++ +SE S +R +T++G+ D+I
Sbjct: 72 ITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQV--ASEMLPSSTERAVTISGSADSI 129
Query: 322 ALAQYLINMSVELLRANLNG 341
+ N+ LL A G
Sbjct: 130 --VDCMRNICQILLEAPPKG 147
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G +IGKGGTKI EIR+ +GA I++ +SE S +R +T++G+ D+I
Sbjct: 72 ITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQV--ASEMLPSSTERAVTISGSADSI 129
Query: 767 ALAQYLINMSVELLRANLNG 786
+ N+ LL A G
Sbjct: 130 --VDCMRNICQILLEAPPKG 147
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
MR I+ + G IIGK G +K++RE +G+ I ++ P ER VT+ GS DS+
Sbjct: 74 MRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPSSTERAVTISGSADSIVDCM 133
Query: 499 SLITKNIEE 507
I + + E
Sbjct: 134 RNICQILLE 142
>gi|393905262|gb|EJD73914.1| hypothetical protein LOAG_18700 [Loa loa]
Length = 228
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 114/161 (70%), Gaps = 4/161 (2%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
KEVGSIIGK G+ +K +R++SG+KI ISD S PERIVT+ GS ++ +AF +I +++
Sbjct: 11 KEVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSTGTINKAFIMICAKLQQ- 69
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
+ L + I +RLIVPA+QCG IIGKGGS+IK IRE +GAS+ VAS+MLP+S
Sbjct: 70 ---DLQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSS 126
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
TER V I G D++ + IC I++++P KG T+PYRP P
Sbjct: 127 TERAVTISGSADSIVDCMRNICQILLEAPAKGNTLPYRPKP 167
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 114/161 (70%), Gaps = 4/161 (2%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
KEVGSIIGK G+ +K +R++SG+KI ISD S PERIVT+ GS ++ +AF +I +++
Sbjct: 11 KEVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSTGTINKAFIMICAKLQQ- 69
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
+ L + I +RLIVPA+QCG IIGKGGS+IK IRE +GAS+ VAS+MLP+S
Sbjct: 70 ---DLQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSS 126
Query: 569 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
TER V I G D++ + IC I++++P KG T+PYRP P
Sbjct: 127 TERAVTISGSADSIVDCMRNICQILLEAPAKGNTLPYRPKP 167
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + VP G +IGKGG+KI EIR+ +GA I++ +SE S +R +T++G+ D+I
Sbjct: 83 ITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQV--ASEMLPSSTERAVTISGSADSI 140
Query: 322 ALAQYLINMSVELLRANLNG 341
+ N+ LL A G
Sbjct: 141 --VDCMRNICQILLEAPAKG 158
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + VP G +IGKGG+KI EIR+ +GA I++ +SE S +R +T++G+ D+I
Sbjct: 83 ITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQV--ASEMLPSSTERAVTISGSADSI 140
Query: 767 ALAQYLINMSVELLRANLNG 786
+ N+ LL A G
Sbjct: 141 --VDCMRNICQILLEAPAKG 158
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
MR I+ + G IIGK G +K++RE +G+ I ++ P ER VT+ GS DS+
Sbjct: 85 MRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSSTERAVTISGSADSIVDCM 144
Query: 499 SLITKNIEE 507
I + + E
Sbjct: 145 RNICQILLE 153
>gi|242764737|ref|XP_002340835.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218724031|gb|EED23448.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 461
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 189/389 (48%), Gaps = 59/389 (15%)
Query: 426 QGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPER 483
Q P + Q +R ++ +E + IGK GE V K+R+ SGSK +SD S ER
Sbjct: 90 QPPQHQTPQDESSWIHIRAVISSQEAATCIGKGGENVSKIRQLSGSKCTVSDYSRGAVER 149
Query: 484 IVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
I+TV G D++ +AF LI + + N+ +S+ LRL++P GSIIGKG
Sbjct: 150 ILTVSGPQDAVAKAFGLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKG 205
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS------- 596
G +I+ I+E SGA + + LP STER + + GV DAV A Y + + +V+
Sbjct: 206 GVRIREIQEASGARLNASDACLPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGG 265
Query: 597 PPKGA-----------------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPL 639
P A +PY +PQ AGG Q+G +S+ N P
Sbjct: 266 PAASAYATRSGGPAGVVPGGMQVVPY--VPQPAGG------QYGHPDSVRRHYPQNNRPG 317
Query: 640 AGL--AALGLGGNSGGG--------MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHN 689
G A GG + GGG A A Q P Q H
Sbjct: 318 PGPYGAPYAHGGPAAQAPVAQPPLHYGGGAARAPYAGAGPHQPAPYGAPHAQ-----PHG 372
Query: 690 RNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 749
+ ++Q IT+++ +PN+++GA+IGKGGTKI EIR +SG++I+I +E +
Sbjct: 373 AGAQPLAGVVSSQ---PITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKI---NEPQ 426
Query: 750 EDSNDRTITMTGTPDAIALAQYLINMSVE 778
E+SN+R +T+TGT + +A Y++ +E
Sbjct: 427 ENSNERLVTITGTQECNQMALYMLYARLE 455
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 182/369 (49%), Gaps = 59/369 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E + IGK GE V K+R+ SGSK +SD S ERI+TV G D++ +AF LI +
Sbjct: 110 ISSQEAATCIGKGGENVSKIRQLSGSKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIR 169
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGG +I+ I+E SGA + +
Sbjct: 170 TL----NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARLNASDA 225
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA--------------- 156
LP STER + + GV DAV A Y + + +V+ P A
Sbjct: 226 CLPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGG 285
Query: 157 --TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGL--AALGLGGNSGGG--- 209
+PY +PQ AGG Q+G +S+ N P G A GG +
Sbjct: 286 MQVVPY--VPQPAGG------QYGHPDSVRRHYPQNNRPGPGPYGAPYAHGGPAAQAPVA 337
Query: 210 -----MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 264
GGG A A Q P Q H + ++Q IT+
Sbjct: 338 QPPLHYGGGAARAPYAGAGPHQPAPYGAPHAQ-----PHGAGAQPLAGVVSSQ---PITQ 389
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +PN+++GA+IGKGGTKI EIR +SG++I+I +E +E+SN+R +T+TGT + +A
Sbjct: 390 QIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMA 446
Query: 325 QYLINMSVE 333
Y++ +E
Sbjct: 447 LYMLYARLE 455
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 128
+H ES I +R ++ + + + IGKGG + IR+ SG+ V SD + ER +
Sbjct: 93 QHQTPQDESSWIHIRAVISSQEAATCIGKGGENVSKIRQLSGSKCTV-SDYSRGAVERIL 151
Query: 129 NIKGVPDAVTQAI 141
+ G DAV +A
Sbjct: 152 TVSGPQDAVAKAF 164
>gi|90086375|dbj|BAE91740.1| unnamed protein product [Macaca fascicularis]
Length = 283
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 149/269 (55%), Gaps = 41/269 (15%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DMLPNSTER + I GVP +VT+
Sbjct: 25 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 84
Query: 140 AIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGPGLIGNQFGMQNSLMGAPDM 189
+ QICL+M+++ P+G TIPY+P+P + AGG + G ++ D+
Sbjct: 85 CVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH---DL 141
Query: 190 GNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRD 249
PL + G S L+ A K N + R Q+ H
Sbjct: 142 EGPPLDAYSIQGQHTIS------PLDLA----------KLNQVARQQSHFAMMHGGTGFA 185
Query: 250 GPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
G + + + Q T E+T+PN LIG +IG+ G I EIR++SGA I+I+
Sbjct: 186 GIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP 245
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLIN 329
E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 246 V---EGSSGRQVTITGSAASISLAQYLIN 271
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 149/269 (55%), Gaps = 41/269 (15%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DMLPNSTER + I GVP +VT+
Sbjct: 25 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 84
Query: 585 AIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGPGLIGNQFGMQNSLMGAPDM 634
+ QICL+M+++ P+G TIPY+P+P + AGG + G ++ D+
Sbjct: 85 CVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH---DL 141
Query: 635 GNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRD 694
PL + G S L+ A K N + R Q+ H
Sbjct: 142 EGPPLDAYSIQGQHTIS------PLDLA----------KLNQVARQQSHFAMMHGGTGFA 185
Query: 695 GPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 745
G + + + Q T E+T+PN LIG +IG+ G I EIR++SGA I+I+
Sbjct: 186 GIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP 245
Query: 746 SEEEEDSNDRTITMTGTPDAIALAQYLIN 774
E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 246 V---EGSSGRQVTITGSAASISLAQYLIN 271
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 25 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 82
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 83 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 136
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 137 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 195
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 196 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 255
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 256 ITGSAASISLAQYLI 270
>gi|170060300|ref|XP_001865740.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167878804|gb|EDS42187.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 294
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 130/217 (59%), Gaps = 36/217 (16%)
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 271
GGLN ALAALA SQL+TN+ NRN +Q Q + EMTVPN+
Sbjct: 30 GGLNPTALAALAGSQLRTNN------------NRNAAV--AQAAAAQVQSQSHEMTVPND 75
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 331
LIG +IGKGGTKI EIR+ISGAMIRIS E + + DRTIT+TG PD++ALAQYLINMS
Sbjct: 76 LIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLINMS 135
Query: 332 VELLRANLNGEG---------------------GGESNMDDFSSDNNLPSSAPLAGLNAS 370
VEL +ANL E GG + + A
Sbjct: 136 VELQKANLGDESAAAAAAAGAGTGSAGNALLVAGGANGGAGGGGAAGSNGGSGAGSAAAG 195
Query: 371 NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLG 407
NPLA+A+P LAQ+L+KPGALNALTSLSALGGL+DLLG
Sbjct: 196 NPLASAIP-LAQLLSKPGALNALTSLSALGGLTDLLG 231
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 149/242 (61%), Gaps = 18/242 (7%)
Query: 634 MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNR 693
+ NPLAGLAALGL G GGLN ALAALA SQL+TN +NRN
Sbjct: 8 LAKNPLAGLAALGLAGAIPTNT-GGLNPTALAALAGSQLRTN------------NNRNAA 54
Query: 694 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
+Q Q + EMTVPN+LIG +IGKGGTKI EIR+ISGAMIRIS E + +
Sbjct: 55 V--AQAAAAQVQSQSHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNT 112
Query: 754 DRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLN 813
DRTIT+TG PD++ALAQYLINMSVEL +ANL E + + + +A L
Sbjct: 113 DRTITITGNPDSVALAQYLINMSVELQKANLGDESAAAAAAAGAGTGSA--GNALLVAGG 170
Query: 814 ASNPLAAALPQLAQILTKPAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDL 873
A+ + + A NPLA+A+P LAQ+L+KPGALNALTSLSALGGL+DL
Sbjct: 171 ANGGAGGGGAAGSNGGSGAGSAAAGNPLASAIP-LAQLLSKPGALNALTSLSALGGLTDL 229
Query: 874 LG 875
LG
Sbjct: 230 LG 231
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 84 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS--TEREVNIKGVPDAVTQAI 141
+ VP G IIGKGG++I IR+ SGA + +++ +S T+R + I G PD+V A
Sbjct: 70 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQ 129
Query: 142 YQI 144
Y I
Sbjct: 130 YLI 132
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 529 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS--TEREVNIKGVPDAVTQAI 586
+ VP G IIGKGG++I IR+ SGA + +++ +S T+R + I G PD+V A
Sbjct: 70 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQ 129
Query: 587 YQI 589
Y I
Sbjct: 130 YLI 132
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+G IIGK G + ++R+ SG+ I IS DS +R +T+ G+ DS+ A LI ++
Sbjct: 77 IGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLINMSV 136
Query: 61 E 61
E
Sbjct: 137 E 137
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 505
+G IIGK G + ++R+ SG+ I IS DS +R +T+ G+ DS+ A LI ++
Sbjct: 77 IGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLINMSV 136
Query: 506 E 506
E
Sbjct: 137 E 137
>gi|350592221|ref|XP_003359061.2| PREDICTED: poly(rC)-binding protein 3-like [Sus scrofa]
Length = 347
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 102/172 (59%), Gaps = 42/172 (24%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 47 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 106
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EEF +++GA
Sbjct: 107 FAMIAYKFEEF------------------------------------------LQSTGAQ 124
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 125 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 176
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 97/164 (59%), Gaps = 42/164 (25%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 55 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMI---- 110
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+ + +++GA V VA DML
Sbjct: 111 --------------------------------------AYKFEEFLQSTGAQVQVAGDML 132
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 133 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 176
>gi|256073934|ref|XP_002573282.1| poly(rc) binding protien [Schistosoma mansoni]
Length = 862
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
Query: 11 GKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKH 70
GK GE V+K REESG++I ISD S+PERIVT+ G+ + ++ AF+L+++ E+
Sbjct: 190 GKRGENVRKYREESGARINISDGSSPERIVTITGTTEQIYIAFTLMSRKFEDDFTQGLLR 249
Query: 71 LGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+G + LRL+VP +QCGSIIGKGGS+IK +RE +GAS+ VAS+ LP STER V
Sbjct: 250 MGDETANCPPVTLRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQVASEALPTSTERTVT 309
Query: 130 IKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI 173
I G D++++ I +C I ++ P KG I YRP P G PGLI
Sbjct: 310 ISGTADSISKCIRLLCDIFLECPNKGPVILYRPKPV-IGNPGLI 352
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
Query: 456 GKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKH 515
GK GE V+K REESG++I ISD S+PERIVT+ G+ + ++ AF+L+++ E+
Sbjct: 190 GKRGENVRKYREESGARINISDGSSPERIVTITGTTEQIYIAFTLMSRKFEDDFTQGLLR 249
Query: 516 LGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
+G + LRL+VP +QCGSIIGKGGS+IK +RE +GAS+ VAS+ LP STER V
Sbjct: 250 MGDETANCPPVTLRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQVASEALPTSTERTVT 309
Query: 575 IKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI 618
I G D++++ I +C I ++ P KG I YRP P G PGLI
Sbjct: 310 ISGTADSISKCIRLLCDIFLECPNKGPVILYRPKPV-IGNPGLI 352
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
N +++ I +EM + N++IG +IG+GGT I EIR S A I+IS E+ + +R IT++
Sbjct: 663 NTEESIIVREMIISNDVIGCIIGRGGTTINEIRNASKAQIKISNC---EDGAKERKITVS 719
Query: 316 GTPDAIALAQYLINMSVELLR 336
G D++ LAQ+LIN S+ + R
Sbjct: 720 GKLDSVNLAQFLINSSIAIHR 740
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 760
N +++ I +EM + N++IG +IG+GGT I EIR S A I+IS E+ + +R IT++
Sbjct: 663 NTEESIIVREMIISNDVIGCIIGRGGTTINEIRNASKAQIKISNC---EDGAKERKITVS 719
Query: 761 GTPDAIALAQYLINMSVELLR 781
G D++ LAQ+LIN S+ + R
Sbjct: 720 GKLDSVNLAQFLINSSIAIHR 740
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI ++R+++GA I++ +SE S +RT+T++GT D+I
Sbjct: 260 VTLRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQV--ASEALPTSTERTVTISGTADSI 317
Query: 322 A 322
+
Sbjct: 318 S 318
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI ++R+++GA I++ +SE S +RT+T++GT D+I
Sbjct: 260 VTLRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQV--ASEALPTSTERTVTISGTADSI 317
Query: 767 A 767
+
Sbjct: 318 S 318
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GSIIGK G +K +RE +G+ I ++ + P ER VT+ G+ DS+ +
Sbjct: 262 LRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQVASEALPTSTERTVTISGTADSISKCI 321
Query: 499 SLIT 502
L+
Sbjct: 322 RLLC 325
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ GSIIGK G +K +RE +G+ I ++ + P ER VT+ G+ DS+ + L+
Sbjct: 270 QCGSIIGKGGSKIKDVRELTGASIQVASEALPTSTERTVTISGTADSISKCIRLLC 325
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 431 ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVI 488
AN + + + R M I+ +G IIG+ G T+ ++R S ++I IS+ ER +TV
Sbjct: 662 ANTEESIIVREM--IISNDVIGCIIGRGGTTINEIRNASKAQIKISNCEDGAKERKITVS 719
Query: 489 GSMDSLFRAFSLITKNI 505
G +DS+ A LI +I
Sbjct: 720 GKLDSVNLAQFLINSSI 736
>gi|360042755|emb|CCD78165.1| putative poly(rc) binding protien [Schistosoma mansoni]
Length = 862
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
Query: 11 GKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKH 70
GK GE V+K REESG++I ISD S+PERIVT+ G+ + ++ AF+L+++ E+
Sbjct: 190 GKRGENVRKYREESGARINISDGSSPERIVTITGTTEQIYIAFTLMSRKFEDDFTQGLLR 249
Query: 71 LGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
+G + LRL+VP +QCGSIIGKGGS+IK +RE +GAS+ VAS+ LP STER V
Sbjct: 250 MGDETANCPPVTLRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQVASEALPTSTERTVT 309
Query: 130 IKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI 173
I G D++++ I +C I ++ P KG I YRP P G PGLI
Sbjct: 310 ISGTADSISKCIRLLCDIFLECPNKGPVILYRPKPV-IGNPGLI 352
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
Query: 456 GKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKH 515
GK GE V+K REESG++I ISD S+PERIVT+ G+ + ++ AF+L+++ E+
Sbjct: 190 GKRGENVRKYREESGARINISDGSSPERIVTITGTTEQIYIAFTLMSRKFEDDFTQGLLR 249
Query: 516 LGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
+G + LRL+VP +QCGSIIGKGGS+IK +RE +GAS+ VAS+ LP STER V
Sbjct: 250 MGDETANCPPVTLRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQVASEALPTSTERTVT 309
Query: 575 IKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI 618
I G D++++ I +C I ++ P KG I YRP P G PGLI
Sbjct: 310 ISGTADSISKCIRLLCDIFLECPNKGPVILYRPKPV-IGNPGLI 352
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
N +++ I +EM + N++IG +IG+GGT I EIR S A I+IS E+ + +R IT++
Sbjct: 663 NTEESIIVREMIISNDVIGCIIGRGGTTINEIRNASKAQIKISNC---EDGAKERKITVS 719
Query: 316 GTPDAIALAQYLINMSVELLR 336
G D++ LAQ+LIN S+ + R
Sbjct: 720 GKLDSVNLAQFLINSSIAIHR 740
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 760
N +++ I +EM + N++IG +IG+GGT I EIR S A I+IS E+ + +R IT++
Sbjct: 663 NTEESIIVREMIISNDVIGCIIGRGGTTINEIRNASKAQIKISNC---EDGAKERKITVS 719
Query: 761 GTPDAIALAQYLINMSVELLR 781
G D++ LAQ+LIN S+ + R
Sbjct: 720 GKLDSVNLAQFLINSSIAIHR 740
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI ++R+++GA I++ +SE S +RT+T++GT D+I
Sbjct: 260 VTLRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQV--ASEALPTSTERTVTISGTADSI 317
Query: 322 A 322
+
Sbjct: 318 S 318
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG+KI ++R+++GA I++ +SE S +RT+T++GT D+I
Sbjct: 260 VTLRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQV--ASEALPTSTERTVTISGTADSI 317
Query: 767 A 767
+
Sbjct: 318 S 318
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GSIIGK G +K +RE +G+ I ++ + P ER VT+ G+ DS+ +
Sbjct: 262 LRLLVPVAQCGSIIGKGGSKIKDVRELTGASIQVASEALPTSTERTVTISGTADSISKCI 321
Query: 499 SLIT 502
L+
Sbjct: 322 RLLC 325
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ GSIIGK G +K +RE +G+ I ++ + P ER VT+ G+ DS+ + L+
Sbjct: 270 QCGSIIGKGGSKIKDVRELTGASIQVASEALPTSTERTVTISGTADSISKCIRLLC 325
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 431 ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVI 488
AN + + + R M I+ +G IIG+ G T+ ++R S ++I IS+ ER +TV
Sbjct: 662 ANTEESIIVREM--IISNDVIGCIIGRGGTTINEIRNASKAQIKISNCEDGAKERKITVS 719
Query: 489 GSMDSLFRAFSLITKNI 505
G +DS+ A LI +I
Sbjct: 720 GKLDSVNLAQFLINSSI 736
>gi|212529012|ref|XP_002144663.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210074061|gb|EEA28148.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 461
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 180/368 (48%), Gaps = 47/368 (12%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 105 HIRAVISSQEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAF 164
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGG +I+ I+E SGA +
Sbjct: 165 GLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARL 220
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + + GV DAV A Y + + +V+ P A
Sbjct: 221 NASDACLPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 280
Query: 602 -------TIPYRPLPQNAGG----PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGN 650
+PY +PQ AGG P + N P P G AA
Sbjct: 281 VVPGGMQVVPY--VPQPAGGQYGHPDSARRHYPQNNRPGPGPYGAPYPHGGPAAQAPVTQ 338
Query: 651 SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKE 710
GGG A A Q P Q H + + ++Q IT++
Sbjct: 339 PPLHYGGGAARAPYAGAGPHQPAPYGAPHAQ-----PHGASTQPLAGVVSSQ---PITQQ 390
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +PN+++GA+IGKGGTKI EIR +SG++I+I +E +E+SN+R +T+TGT + +A
Sbjct: 391 IYIPNDMVGAIIGKGGTKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMAL 447
Query: 771 YLINMSVE 778
Y++ +E
Sbjct: 448 YMLYARLE 455
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 177/363 (48%), Gaps = 47/363 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI +
Sbjct: 110 ISSQEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIR 169
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGG +I+ I+E SGA + +
Sbjct: 170 TL----NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARLNASDA 225
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA--------------- 156
LP STER + + GV DAV A Y + + +V+ P A
Sbjct: 226 CLPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGG 285
Query: 157 --TIPYRPLPQNAGG----PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 210
+PY +PQ AGG P + N P P G AA
Sbjct: 286 MQVVPY--VPQPAGGQYGHPDSARRHYPQNNRPGPGPYGAPYPHGGPAAQAPVTQPPLHY 343
Query: 211 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 270
GGG A A Q P Q H + + ++Q IT+++ +PN
Sbjct: 344 GGGAARAPYAGAGPHQPAPYGAPHAQ-----PHGASTQPLAGVVSSQ---PITQQIYIPN 395
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
+++GA+IGKGGTKI EIR +SG++I+I +E +E+SN+R +T+TGT + +A Y++
Sbjct: 396 DMVGAIIGKGGTKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMALYMLYA 452
Query: 331 SVE 333
+E
Sbjct: 453 RLE 455
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ + + + IGKGG + IR SGA V SD + ER + + G D
Sbjct: 100 ESSWIHIRAVISSQEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 158
Query: 136 AVTQAI 141
AV +A
Sbjct: 159 AVAKAF 164
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES I +R ++ + + + IGKGG + IR SGA V SD + ER + + G D
Sbjct: 100 ESSWIHIRAVISSQEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 158
Query: 581 AVTQAI 586
AV +A
Sbjct: 159 AVAKAF 164
>gi|320591828|gb|EFX04267.1| kh domain containing RNA-binding protein [Grosmannia clavigera
kw1407]
Length = 476
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 191/389 (49%), Gaps = 61/389 (15%)
Query: 427 GPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERI 484
P A+ +T+ + +R ++ E +IIGK GE V K+R+ S +K +SD ERI
Sbjct: 106 APANAHDETSWIH--IRAVISSPEAATIIGKGGENVSKIRQMSNAKCTVSDYQKGAVERI 163
Query: 485 VTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLG--GNGESQLIQLRLIVPASQCGSIIGK 542
+TV G +D++ +AF LI + + N+ LG N S+ LRL++P GSIIGK
Sbjct: 164 LTVSGVVDAVAKAFGLIIRTL------NNEPLGEPSNAHSKTYPLRLLIPHILIGSIIGK 217
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS------ 596
GGS+IK I+E SGA + + LP S+ER + + GV DAV A Y + +++
Sbjct: 218 GGSRIKEIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFG 277
Query: 597 -PPKGA-----------------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNP 638
P A +PY LPQ AGG +G + +P
Sbjct: 278 GPAASAYAARGGGPVGVVPGGMQVVPY--LPQPAGG------SYGRTENY----SRRQDP 325
Query: 639 LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQH---------N 689
A L G G G + G A+ + P+ +QN H
Sbjct: 326 RAQLPPQGYGAPYGAPIAHG-PGPAVPMYGAQAAGAYGAPQLPHQNAAHHGAMPHGPHAG 384
Query: 690 RNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 749
+ GP +T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +
Sbjct: 385 QPPHAGPGGHPAMAGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKI---NEPQ 441
Query: 750 EDSNDRTITMTGTPDAIALAQYLINMSVE 778
++SN+R +T+TGT + +A Y++ +E
Sbjct: 442 DNSNERLVTITGTEECNRMALYMLYSRLE 470
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 180/366 (49%), Gaps = 59/366 (16%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V K+R+ S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 127 EAATIIGKGGENVSKIRQMSNAKCTVSDYQKGAVERILTVSGVVDAVAKAFGLIIRTL-- 184
Query: 63 FHKNQNKHLG--GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
N+ LG N S+ LRL++P GSIIGKGGS+IK I+E SGA + + L
Sbjct: 185 ----NNEPLGEPSNAHSKTYPLRLLIPHILIGSIIGKGGSRIKEIQEASGARLNASDSCL 240
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA----------------- 156
P S+ER + + GV DAV A Y + +++ P A
Sbjct: 241 PMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYAARGGGPVGVVPGGMQ 300
Query: 157 TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNA 216
+PY LPQ AGG +G + +P A L G G G + G
Sbjct: 301 VVPY--LPQPAGG------SYGRTENY----SRRQDPRAQLPPQGYGAPYGAPIAHG-PG 347
Query: 217 AALAALASSQLKTNHMPRNQNQNQNQH---------NRNNRDGPSQKTNQQQNQITKEMT 267
A+ + P+ +QN H + GP +T+++
Sbjct: 348 PAVPMYGAQAAGAYGAPQLPHQNAAHHGAMPHGPHAGQPPHAGPGGHPAMAGAPLTQQIY 407
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
+PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT + +A Y+
Sbjct: 408 IPNDMVGAIIGKGGQKINEIRQVSGSVIKI---NEPQDNSNERLVTITGTEECNRMALYM 464
Query: 328 INMSVE 333
+ +E
Sbjct: 465 LYSRLE 470
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 73 GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 132
+ E+ I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G
Sbjct: 110 AHDETSWIHIRAVISSPEAATIIGKGGENVSKIRQMSNAKCTV-SDYQKGAVERILTVSG 168
Query: 133 VPDAVTQAIYQICLIMVDSP 152
V DAV +A I + + P
Sbjct: 169 VVDAVAKAFGLIIRTLNNEP 188
>gi|367050644|ref|XP_003655701.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
gi|347002965|gb|AEO69365.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
Length = 374
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 191/365 (52%), Gaps = 58/365 (15%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK G+ V LREE+G K +S +R++T+
Sbjct: 45 YAQTQLT-----LRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTI 99
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ------LRLIVPASQCGSIIG 541
G +++ RA++ + +++ E +GG +IQ ++L++ +Q G+IIG
Sbjct: 100 TGGCEAISRAYAAVARSLLEGAPTMG--MGG-----VIQNNGTHPIKLLISHNQMGTIIG 152
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
+ G +IK I++ SG + +MLP STER V ++G P+ + +A+++IC +VD +G
Sbjct: 153 RQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAVWEICKCLVDDWQRGT 212
Query: 602 -TIPYRPL--PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 658
T+ Y P+ Q G PG+ G +Q+ AP GG+ G G
Sbjct: 213 GTVLYNPVVRTQGVGAPGISGGSGYVQDR---AP--------------YGGSRVTRTGNG 255
Query: 659 LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELI 718
+ +N PR+ N+ + + +NR P+ N ++ Q T+ +++P +++
Sbjct: 256 ADF------------SNGGPRSYNRRSDS-DPSNRGPPTHDENGEEIQ-TQNISIPADMV 301
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMS 776
G +IG+ G+KI EIRK SGA I I+K+ +E + +R T+ GT A A +L+ N+
Sbjct: 302 GCIIGRAGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGTSKANETALFLLYENLE 359
Query: 777 VELLR 781
E LR
Sbjct: 360 AEKLR 364
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 183/346 (52%), Gaps = 53/346 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LREE+G K +S +R++T+ G +++ RA++ + +++
Sbjct: 59 KEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTITGGCEAISRAYAAVARSLL 118
Query: 62 EFHKNQNKHLGGNGESQLIQ------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
E +GG +IQ ++L++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 119 EGAPTMG--MGG-----VIQNNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVA 171
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPL--PQNAGGPGL 172
+MLP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ Q G PG+
Sbjct: 172 QKEMLPQSTERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRTQGVGAPGI 231
Query: 173 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
G +Q+ AP GG+ G G + +N
Sbjct: 232 SGGSGYVQDR---AP--------------YGGSRVTRTGNGADF------------SNGG 262
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
PR+ N+ + + +NR P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SG
Sbjct: 263 PRSYNRRSDS-DPSNRGPPTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKTSG 320
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
A I I+K+ +E + +R T+ GT A A +L+ N+ E LR
Sbjct: 321 ARISIAKAPHDE--TGERMFTIMGTSKANETALFLLYENLEAEKLR 364
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 251 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
P+ KT+Q+ Q Q+T V ++ G +IGKGG + ++R+ +G +SK +
Sbjct: 37 PAPKTDQEYAQTQLTLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVV---QGVY 93
Query: 309 DRTITMTGTPDAIALAQYLINMSV 332
DR +T+TG +AI+ A + S+
Sbjct: 94 DRVLTITGGCEAISRAYAAVARSL 117
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 696 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
P+ KT+Q+ Q Q+T V ++ G +IGKGG + ++R+ +G +SK +
Sbjct: 37 PAPKTDQEYAQTQLTLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVV---QGVY 93
Query: 754 DRTITMTGTPDAIALAQYLINMSV 777
DR +T+TG +AI+ A + S+
Sbjct: 94 DRVLTITGGCEAISRAYAAVARSL 117
>gi|302509454|ref|XP_003016687.1| hypothetical protein ARB_04979 [Arthroderma benhamiae CBS 112371]
gi|327303250|ref|XP_003236317.1| KH domain RNA binding protein [Trichophyton rubrum CBS 118892]
gi|291180257|gb|EFE36042.1| hypothetical protein ARB_04979 [Arthroderma benhamiae CBS 112371]
gi|326461659|gb|EGD87112.1| KH domain RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 483
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 181/367 (49%), Gaps = 54/367 (14%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 132 HIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAF 191
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 192 GLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARL 247
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 248 NASDSCLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 307
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA---LGLGGNS 651
+PY +PQ AGG Q+G +SL NNP A AA G+
Sbjct: 308 VVPGGMQVVPY--VPQPAGG------QYGHPDSL-----RRNNPQANRAAPGGYGVPYMQ 354
Query: 652 GGGMGGGLNAAALAALASSQLKTN----HMPRNQNQNQNQHNRN-NRDGPSQKTNQQQNQ 706
+L AS + H P Q H + +GP
Sbjct: 355 QPAPHPHAPQPSLHYGASPRTGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQP 414
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGT +
Sbjct: 415 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTQECN 471
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 472 QMALYML 478
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 177/358 (49%), Gaps = 54/358 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 141 EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 198
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 199 --NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPL 256
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
STER + I GV DAV A Y + + +V+ P A +
Sbjct: 257 STERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVV 316
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA---LGLGGNSGGGMGGGLN 215
PY +PQ AGG Q+G +SL NNP A AA G+
Sbjct: 317 PY--VPQPAGG------QYGHPDSL-----RRNNPQANRAAPGGYGVPYMQQPAPHPHAP 363
Query: 216 AAALAALASSQLKTN----HMPRNQNQNQNQHNRN-NRDGPSQKTNQQQNQITKEMTVPN 270
+L AS + H P Q H + +GP +T+++ +PN
Sbjct: 364 QPSLHYGASPRTGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQPLTQQIYIPN 423
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGT + +A Y++
Sbjct: 424 DMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTQECNQMALYML 478
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 217 RLLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERSLVILGVADAVHIA 274
Query: 325 QYLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 275 TYYVAVTLVEQLTERFGG 292
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 217 RLLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERSLVILGVADAVHIA 274
Query: 770 QYLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 275 TYYVAVTLVEQLTERFGG 292
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ + +R ++ +++ ++IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 127 ETGWVHIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 185
Query: 136 AVTQAIYQICLIMVDSP 152
AV +A I + + P
Sbjct: 186 AVAKAFGLIIRTLNNEP 202
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
E+ + +R ++ +++ ++IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 127 ETGWVHIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 185
Query: 581 AVTQAIYQICLIMVDSP 597
AV +A I + + P
Sbjct: 186 AVAKAFGLIIRTLNNEP 202
>gi|326469510|gb|EGD93519.1| KH domain RNA binding protein [Trichophyton tonsurans CBS 112818]
gi|326478964|gb|EGE02974.1| KH domain RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 483
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 181/367 (49%), Gaps = 54/367 (14%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 132 HIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAF 191
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 192 GLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARL 247
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 248 NASDSCLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 307
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA---LGLGGNS 651
+PY +PQ AGG Q+G +SL NNP A AA G+
Sbjct: 308 VVPGGMQVVPY--VPQPAGG------QYGHPDSL-----RRNNPQANRAAPGGYGVPYMQ 354
Query: 652 GGGMGGGLNAAALAALASSQLKTN----HMPRNQNQNQNQHNRN-NRDGPSQKTNQQQNQ 706
+L AS + H P Q H + +GP
Sbjct: 355 QPAPHPHAPQPSLHYGASPRTGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQP 414
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGT +
Sbjct: 415 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTQECN 471
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 472 QMALYML 478
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 177/358 (49%), Gaps = 54/358 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 141 EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 198
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 199 --NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPL 256
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
STER + I GV DAV A Y + + +V+ P A +
Sbjct: 257 STERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVV 316
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA---LGLGGNSGGGMGGGLN 215
PY +PQ AGG Q+G +SL NNP A AA G+
Sbjct: 317 PY--VPQPAGG------QYGHPDSL-----RRNNPQANRAAPGGYGVPYMQQPAPHPHAP 363
Query: 216 AAALAALASSQLKTN----HMPRNQNQNQNQHNRN-NRDGPSQKTNQQQNQITKEMTVPN 270
+L AS + H P Q H + +GP +T+++ +PN
Sbjct: 364 QPSLHYGASPRTGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQPLTQQIYIPN 423
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGT + +A Y++
Sbjct: 424 DMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTQECNQMALYML 478
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 217 RLLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERSLVILGVADAVHIA 274
Query: 325 QYLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 275 TYYVAVTLVEQLTERFGG 292
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 217 RLLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERSLVILGVADAVHIA 274
Query: 770 QYLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 275 TYYVAVTLVEQLTERFGG 292
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ + +R ++ +++ ++IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 127 ETGWVHIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 185
Query: 136 AVTQAIYQICLIMVDSP 152
AV +A I + + P
Sbjct: 186 AVAKAFGLIIRTLNNEP 202
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
E+ + +R ++ +++ ++IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 127 ETGWVHIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 185
Query: 581 AVTQAIYQICLIMVDSP 597
AV +A I + + P
Sbjct: 186 AVAKAFGLIIRTLNNEP 202
>gi|302655788|ref|XP_003019678.1| hypothetical protein TRV_06307 [Trichophyton verrucosum HKI 0517]
gi|291183415|gb|EFE39033.1| hypothetical protein TRV_06307 [Trichophyton verrucosum HKI 0517]
Length = 483
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 179/381 (46%), Gaps = 82/381 (21%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 132 HIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAF 191
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 192 GLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARL 247
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 248 NASDSCLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 307
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA---------- 644
+PY +PQ AGG Q+G +SL NNP A AA
Sbjct: 308 VVPGGMQVVPY--VPQPAGG------QYGHPDSLRR-----NNPQANRAAPGGYGVPYMQ 354
Query: 645 ------------LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNN 692
L G + G G A L H+P N
Sbjct: 355 QPAPHPHAPQPSLHYGASPRTGYTGAGPHQPAPYGAPQPLHGGHVPPN------------ 402
Query: 693 RDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 752
GP +T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++S
Sbjct: 403 --GPPMGAAVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNS 457
Query: 753 NDRTITMTGTPDAIALAQYLI 773
N+R +T+TGT + +A Y++
Sbjct: 458 NERLVTITGTQECNQMALYML 478
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 175/372 (47%), Gaps = 82/372 (22%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 141 EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 198
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 199 --NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPL 256
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
STER + I GV DAV A Y + + +V+ P A +
Sbjct: 257 STERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVV 316
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA------------------- 199
PY +PQ AGG Q+G +SL NNP A AA
Sbjct: 317 PY--VPQPAGG------QYGHPDSLRR-----NNPQANRAAPGGYGVPYMQQPAPHPHAP 363
Query: 200 ---LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTN 256
L G + G G A L H+P N GP
Sbjct: 364 QPSLHYGASPRTGYTGAGPHQPAPYGAPQPLHGGHVPPN--------------GPPMGAA 409
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TG
Sbjct: 410 VPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITG 466
Query: 317 TPDAIALAQYLI 328
T + +A Y++
Sbjct: 467 TQECNQMALYML 478
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ + +R ++ +++ ++IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 127 ETGWVHIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 185
Query: 136 AVTQAIYQICLIMVDSP 152
AV +A I + + P
Sbjct: 186 AVAKAFGLIIRTLNNEP 202
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
E+ + +R ++ +++ ++IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 127 ETGWVHIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 185
Query: 581 AVTQAIYQICLIMVDSP 597
AV +A I + + P
Sbjct: 186 AVAKAFGLIIRTLNNEP 202
>gi|67523265|ref|XP_659693.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
gi|40745765|gb|EAA64921.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
Length = 745
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 184/377 (48%), Gaps = 57/377 (15%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAF 168
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGG++I+ I++ SGA +
Sbjct: 169 GLIIRTL----NNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGARL 224
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 225 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 284
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G PD G A G G
Sbjct: 285 AVPGGMQVVPY--VPQPAGG------QYGH-------PDTFKRHHPGQARAGAGAYGVPY 329
Query: 655 MGGGLNAAALA--ALASSQLKTNHM---PRNQNQNQNQHNRNNRDGPSQKT----NQQQN 705
+ G A +A + +T + P R GP+
Sbjct: 330 LHGQHAPAPVAPQPMHYGAPQTPYAGAGPHQPTPYGAPQAAQPRGGPTPAAPVGGAMPGQ 389
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT +
Sbjct: 390 PLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQEC 446
Query: 766 IALAQYLINMSVELLRA 782
+A Y++ ++ RA
Sbjct: 447 NQMALYMLYSRLDTYRA 463
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 181/372 (48%), Gaps = 57/372 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI +
Sbjct: 114 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIR 173
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGG++I+ I++ SGA + +
Sbjct: 174 TL----NNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGARLNASDA 229
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA--------------- 156
LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGG 289
Query: 157 --TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
+PY +PQ AGG Q+G PD G A G G + G
Sbjct: 290 MQVVPY--VPQPAGG------QYGH-------PDTFKRHHPGQARAGAGAYGVPYLHGQH 334
Query: 215 NAAALA--ALASSQLKTNHM---PRNQNQNQNQHNRNNRDGPSQKT----NQQQNQITKE 265
A +A + +T + P R GP+ +T++
Sbjct: 335 APAPVAPQPMHYGAPQTPYAGAGPHQPTPYGAPQAAQPRGGPTPAAPVGGAMPGQPLTQQ 394
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A
Sbjct: 395 IYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMAL 451
Query: 326 YLINMSVELLRA 337
Y++ ++ RA
Sbjct: 452 YMLYSRLDTYRA 463
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGGT+I EI+ SGA R++ S S +R++ + G DA+ +A
Sbjct: 195 LLIPHILIGSIIGKGGTRIREIQDASGA--RLNASDACLPLSTERSLVILGVADAVHIAT 252
Query: 326 YLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 253 YYVAVTLVEQLTERFGG 269
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGGT+I EI+ SGA R++ S S +R++ + G DA+ +A
Sbjct: 195 LLIPHILIGSIIGKGGTRIREIQDASGA--RLNASDACLPLSTERSLVILGVADAVHIAT 252
Query: 771 YLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 253 YYVAVTLVEQLTERFGG 269
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
NQ++ ES I +R ++ + + ++IGKGG + IR SGA V SD + E
Sbjct: 94 NQSEQQRPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVE 152
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSP 152
R + + G DAV +A I + + P
Sbjct: 153 RILTVSGPQDAVAKAFGLIIRTLNNEP 179
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
Q+ + N I + ++ VIGKGG + +IR++SGA +S S + +R +
Sbjct: 99 QRPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYS---RGAVERIL 155
Query: 313 TMTGTPDAIALAQYLI 328
T++G DA+A A LI
Sbjct: 156 TVSGPQDAVAKAFGLI 171
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
Q+ + N I + ++ VIGKGG + +IR++SGA +S S + +R +
Sbjct: 99 QRPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYS---RGAVERIL 155
Query: 758 TMTGTPDAIALAQYLI 773
T++G DA+A A LI
Sbjct: 156 TVSGPQDAVAKAFGLI 171
>gi|315050398|ref|XP_003174573.1| Poly(rC)-binding protein 3 [Arthroderma gypseum CBS 118893]
gi|311339888|gb|EFQ99090.1| Poly(rC)-binding protein 3 [Arthroderma gypseum CBS 118893]
Length = 489
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 182/367 (49%), Gaps = 54/367 (14%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 132 HIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAF 191
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 192 GLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARL 247
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 248 NASDSCLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 307
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA---LGLGGNS 651
+PY +PQ AGG Q+G ++L NNP A AA G+
Sbjct: 308 VVPGGMQVVPY--VPQPAGG------QYGHPDTL-----RRNNPQANRAAPGGYGVPYMQ 354
Query: 652 GGGMGGGLNAAALAALASSQLKTN----HMPRNQNQNQNQHNRN-NRDGPSQKTNQQQNQ 706
+L AS + H P Q H + +GP
Sbjct: 355 QPAPHPHAPQPSLHYGASPRAGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQP 414
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 415 LTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTQECN 471
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 472 QMALYML 478
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 178/358 (49%), Gaps = 54/358 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 141 EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 198
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 199 --NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPL 256
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
STER + I GV DAV A Y + + +V+ P A +
Sbjct: 257 STERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVV 316
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA---LGLGGNSGGGMGGGLN 215
PY +PQ AGG Q+G ++L NNP A AA G+
Sbjct: 317 PY--VPQPAGG------QYGHPDTL-----RRNNPQANRAAPGGYGVPYMQQPAPHPHAP 363
Query: 216 AAALAALASSQLKTN----HMPRNQNQNQNQHNRN-NRDGPSQKTNQQQNQITKEMTVPN 270
+L AS + H P Q H + +GP +T+++ +PN
Sbjct: 364 QPSLHYGASPRAGYTGAGPHQPAPYGAPQPPHGGHVPPNGPPMGAAVPGQPLTQQIYIPN 423
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT + +A Y++
Sbjct: 424 DMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTQECNQMALYML 478
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 217 RLLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERSLVILGVADAVHIA 274
Query: 325 QYLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 275 TYYVAVTLVEQLTERFGG 292
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 217 RLLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERSLVILGVADAVHIA 274
Query: 770 QYLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 275 TYYVAVTLVEQLTERFGG 292
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ + +R ++ +++ ++IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 127 ETGWVHIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 185
Query: 136 AVTQAIYQICLIMVDSP 152
AV +A I + + P
Sbjct: 186 AVAKAFGLIIRTLNNEP 202
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
E+ + +R ++ +++ ++IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 127 ETGWVHIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 185
Query: 581 AVTQAIYQICLIMVDSP 597
AV +A I + + P
Sbjct: 186 AVAKAFGLIIRTLNNEP 202
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P + N +N SQ + + + + VIGKGG + +IR++SG
Sbjct: 102 PIQSTASHNDRATSNPPATSQPAQDETGWVHIRAVISSAEAATVIGKGGENVSQIRRLSG 161
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
A +S S + +R +T++G DA+A A LI
Sbjct: 162 AKCTVSDYS---RGAVERILTVSGMQDAVAKAFGLI 194
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
P + N +N SQ + + + + VIGKGG + +IR++SG
Sbjct: 102 PIQSTASHNDRATSNPPATSQPAQDETGWVHIRAVISSAEAATVIGKGGENVSQIRRLSG 161
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
A +S S + +R +T++G DA+A A LI
Sbjct: 162 AKCTVSDYS---RGAVERILTVSGMQDAVAKAFGLI 194
>gi|121710178|ref|XP_001272705.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119400855|gb|EAW11279.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 464
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 181/367 (49%), Gaps = 54/367 (14%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 113 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAF 172
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA +
Sbjct: 173 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARL 228
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV D+V A Y + + +V+ P A
Sbjct: 229 NASDACLPLSTERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 288
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G + N AG A G+ G
Sbjct: 289 AVPGGMQVVPY--VPQPAGG------QYGHPETFKRHHPHPNRAAAG--AYGVPYLHGQP 338
Query: 655 MGGGLNAAALAALASSQLKTN----HMPRNQNQNQNQHNRNNRDGPSQKTN----QQQNQ 706
+ AL A+ H P Q +R P+ T
Sbjct: 339 APAPVAQPALHYGATPHTPYAGAGPHQPAPYGAPQPAQSRG---APTPATPAGGVMPGQP 395
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT +
Sbjct: 396 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECN 452
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 453 QMALYML 459
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 178/362 (49%), Gaps = 54/362 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI +
Sbjct: 118 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIR 177
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA + +
Sbjct: 178 TL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDA 233
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA--------------- 156
LP STER + I GV D+V A Y + + +V+ P A
Sbjct: 234 CLPLSTERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGG 293
Query: 157 --TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
+PY +PQ AGG Q+G + N AG A G+ G +
Sbjct: 294 MQVVPY--VPQPAGG------QYGHPETFKRHHPHPNRAAAG--AYGVPYLHGQPAPAPV 343
Query: 215 NAAALAALASSQLKTN----HMPRNQNQNQNQHNRNNRDGPSQKTN----QQQNQITKEM 266
AL A+ H P Q +R P+ T +T+++
Sbjct: 344 AQPALHYGATPHTPYAGAGPHQPAPYGAPQPAQSRG---APTPATPAGGVMPGQPLTQQI 400
Query: 267 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 326
+PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A Y
Sbjct: 401 YIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMALY 457
Query: 327 LI 328
++
Sbjct: 458 ML 459
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N D PS Q + +P+ LIG++IGKGG++I EI++ SGA R++ S
Sbjct: 180 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDAC 234
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
S +R++ + G D++ +A Y + ++ VE L G
Sbjct: 235 LPLSTERSLVILGVADSVHIATYYVAVTLVEQLTERFGG 273
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N D PS Q + +P+ LIG++IGKGG++I EI++ SGA R++ S
Sbjct: 180 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDAC 234
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S +R++ + G D++ +A Y + ++ VE L G
Sbjct: 235 LPLSTERSLVILGVADSVHIATYYVAVTLVEQLTERFGG 273
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 101 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 152
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
+ ER + + G DAV +A I + + P
Sbjct: 153 GAVERILTVSGPQDAVAKAFGLIIRTLNNEP 183
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 101 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 152
Query: 567 NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ ER + + G DAV +A I + + P
Sbjct: 153 GAVERILTVSGPQDAVAKAFGLIIRTLNNEP 183
Score = 39.3 bits (90), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 238 QNQNQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
Q+ H P Q Q ++ I + ++ VIGKGG + +IR++SGA
Sbjct: 87 QSTASHGDRASSQPEQHRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCT 146
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+S S + +R +T++G DA+A A LI
Sbjct: 147 VSDYS---RGAVERILTVSGPQDAVAKAFGLI 175
Score = 39.3 bits (90), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 683 QNQNQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
Q+ H P Q Q ++ I + ++ VIGKGG + +IR++SGA
Sbjct: 87 QSTASHGDRASSQPEQHRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCT 146
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+S S + +R +T++G DA+A A LI
Sbjct: 147 VSDYS---RGAVERILTVSGPQDAVAKAFGLI 175
>gi|402086578|gb|EJT81476.1| Poly(rC)-binding protein 3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 486
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 186/374 (49%), Gaps = 56/374 (14%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V K+R+ SG+K +SD ERI+TV G +D++ +AF
Sbjct: 127 HIRAVISSPEAATVIGKGGENVSKIRQLSGAKCTVSDYQKGAVERILTVSGIVDAVAKAF 186
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ + S+ LRL++P GSIIGKGG++IK I+E SGA +
Sbjct: 187 GLIIRTL----NNEPLSDASSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARL 242
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP S+ER + + GV DAV A Y + +++ P A
Sbjct: 243 NASDSCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAYATRAGGPVG 302
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY LPQ AGG FG + + PD P+ AA+ +
Sbjct: 303 AVPGGMQVVPY--LPQPAGG------NFGNRENYGRRPDPRAGPVPQGAAVPYAQHYNPH 354
Query: 655 MGGGLNAAALAALAS------SQLKTNHM----PRNQNQNQNQHNRNNRDGPSQKTNQQQ 704
A + + ++ H+ P+ Q + GP +
Sbjct: 355 AAHQPTPAVPVHYGAQGGAYGAHVQPPHVGHAGPQVHGAPHQQPMHSQMPGPGGAQS--- 411
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
+T+++ +PN+++GA+IGKGGTKI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 412 --LTQQIYIPNDMVGAIIGKGGTKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEE 466
Query: 765 AIALAQYLINMSVE 778
+A Y++ +E
Sbjct: 467 CNRMALYMLYSRLE 480
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 182/365 (49%), Gaps = 56/365 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V K+R+ SG+K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 136 EAATVIGKGGENVSKIRQLSGAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 193
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + S+ LRL++P GSIIGKGG++IK I+E SGA + + LP
Sbjct: 194 --NNEPLSDASSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCLPL 251
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
S+ER + + GV DAV A Y + +++ P A +
Sbjct: 252 SSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAYATRAGGPVGAVPGGMQVV 311
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 218
PY LPQ AGG FG + + PD P+ AA+ + A
Sbjct: 312 PY--LPQPAGG------NFGNRENYGRRPDPRAGPVPQGAAVPYAQHYNPHAAHQPTPAV 363
Query: 219 LAALAS------SQLKTNHM----PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTV 268
+ + ++ H+ P+ Q + GP + +T+++ +
Sbjct: 364 PVHYGAQGGAYGAHVQPPHVGHAGPQVHGAPHQQPMHSQMPGPGGAQS-----LTQQIYI 418
Query: 269 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
PN+++GA+IGKGGTKI EIR+ISG++I+I +E +++SN+R +T+TGT + +A Y++
Sbjct: 419 PNDMVGAIIGKGGTKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECNRMALYML 475
Query: 329 NMSVE 333
+E
Sbjct: 476 YSRLE 480
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E+ I +R ++ + + ++IGKGG + IR+ SGA V SD + ER + + G+
Sbjct: 120 HDETAWIHIRAVISSPEAATVIGKGGENVSKIRQLSGAKCTV-SDYQKGAVERILTVSGI 178
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 179 VDAVAKAFGLIIRTLNNEP 197
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ E+ I +R ++ + + ++IGKGG + IR+ SGA V SD + ER + + G+
Sbjct: 120 HDETAWIHIRAVISSPEAATVIGKGGENVSKIRQLSGAKCTV-SDYQKGAVERILTVSGI 178
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 179 VDAVAKAFGLIIRTLNNEP 197
>gi|255932595|ref|XP_002557854.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582473|emb|CAP80658.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 473
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 178/366 (48%), Gaps = 50/366 (13%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF
Sbjct: 108 HIRAVISSPEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAF 167
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA +
Sbjct: 168 GLIIRTL----NNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARL 223
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 224 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVEQLSERYGGPAASAYATRSGGPAG 283
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G ++ N AG A G+ G
Sbjct: 284 AVPGGMQVVPY--VPQPAGG------QYGHPDTFKRHHPHPNR--AGGGAYGVPYLHGQP 333
Query: 655 MGGGLNAAALAALASSQLKTN----HMPRNQ--NQNQNQHNRNNRDGPSQKTNQQQNQ-I 707
+ + A+ Q H P Q R P+ Q +
Sbjct: 334 APAPVPQTPMHFPAAPQAPYGGAGPHQPAPFVGGPQQPTPGRGPPTAPAPVGAAMPGQPL 393
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E SN+R +T+TGT +
Sbjct: 394 TQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQESSNERLVTITGTAECNQ 450
Query: 768 LAQYLI 773
+A Y++
Sbjct: 451 MALYML 456
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 174/357 (48%), Gaps = 50/357 (14%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF LI + +
Sbjct: 117 EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAFGLIIRTL-- 174
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA + + LP
Sbjct: 175 --NNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDACLPL 232
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
STER + I GV DAV A Y + + +V+ P A +
Sbjct: 233 STERSLVILGVADAVHIATYYVAVTLVEQLSERYGGPAASAYATRSGGPAGAVPGGMQVV 292
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 218
PY +PQ AGG Q+G ++ N AG A G+ G +
Sbjct: 293 PY--VPQPAGG------QYGHPDTFKRHHPHPNR--AGGGAYGVPYLHGQPAPAPVPQTP 342
Query: 219 LAALASSQLKTN----HMPRNQ--NQNQNQHNRNNRDGPSQKTNQQQNQ-ITKEMTVPNE 271
+ A+ Q H P Q R P+ Q +T+++ +PN+
Sbjct: 343 MHFPAAPQAPYGGAGPHQPAPFVGGPQQPTPGRGPPTAPAPVGAAMPGQPLTQQIYIPND 402
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
++GA+IGKGG KI EIR +SG++I+I +E +E SN+R +T+TGT + +A Y++
Sbjct: 403 MVGAIIGKGGAKINEIRHLSGSVIKI---NEPQESSNERLVTITGTAECNQMALYML 456
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 113/274 (41%), Gaps = 43/274 (15%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ +P+ LIG++IGKGG++I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 193 RLLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDACLPLSTERSLVILGVADAVHIA 250
Query: 325 QYLINMS-VELLRANLNGE------------------------------GGGESNMDDFS 353
Y + ++ VE L G GG + D F
Sbjct: 251 TYYVAVTLVEQLSERYGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPDTFK 310
Query: 354 SDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGG 413
+ P+ A G P P A + P A + GG GG
Sbjct: 311 RHHPHPNRA--GGGAYGVPYLHGQPAPAPVPQTPMHFPAAPQ-APYGGAGPHQPAPFVGG 367
Query: 414 GSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKI 473
+ G G P P G + + VG+IIGK G + ++R SGS I
Sbjct: 368 PQQPTPGRGP-PTAPAPVGAAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVI 426
Query: 474 YISD--SSTPERIVTVIGSMD----SLFRAFSLI 501
I++ S+ ER+VT+ G+ + +L+ +S +
Sbjct: 427 KINEPQESSNERLVTITGTAECNQMALYMLYSRL 460
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ +P+ LIG++IGKGG++I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 193 RLLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDACLPLSTERSLVILGVADAVHIA 250
Query: 770 QYLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 251 TYYVAVTLVEQLSERYGG 268
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES + +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 103 ESSWVHIRAVISSPEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 161
Query: 136 AVTQAI 141
A +A
Sbjct: 162 AAAKAF 167
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES + +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 103 ESSWVHIRAVISSPEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 161
Query: 581 AVTQAI 586
A +A
Sbjct: 162 AAAKAF 167
>gi|425778068|gb|EKV16213.1| hypothetical protein PDIP_37280 [Penicillium digitatum Pd1]
gi|425780605|gb|EKV18611.1| hypothetical protein PDIG_09250 [Penicillium digitatum PHI26]
Length = 496
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 177/366 (48%), Gaps = 50/366 (13%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF
Sbjct: 111 HIRAVISSPEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAF 170
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA +
Sbjct: 171 GLIIRTL----NNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARL 226
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 227 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVEQLSERYGGPAASAYATRSGGPAG 286
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G + N AG A G+ G
Sbjct: 287 AVPGGMQVVPY--VPQPAGG------QYGHPETFKRHHPHPNR--AGGGAYGVPYLHGQP 336
Query: 655 MGGGLNAAALAALASSQLKT----NHMPRNQ--NQNQNQHNRNNRDGPSQKTNQQQNQ-I 707
+ + A+ Q H P Q R P+ Q +
Sbjct: 337 APAPVPQTPMHFPAAPQAPYGGAGPHQPAPFVGGPQQPTPGRGPPTAPAPVGASMPGQPL 396
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E SN+R +T+TGT +
Sbjct: 397 TQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQESSNERLVTITGTAECNQ 453
Query: 768 LAQYLI 773
+A Y++
Sbjct: 454 MALYML 459
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 173/357 (48%), Gaps = 50/357 (14%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF LI + +
Sbjct: 120 EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAFGLIIRTL-- 177
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA + + LP
Sbjct: 178 --NNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDACLPL 235
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
STER + I GV DAV A Y + + +V+ P A +
Sbjct: 236 STERSLVILGVADAVHIATYYVAVTLVEQLSERYGGPAASAYATRSGGPAGAVPGGMQVV 295
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 218
PY +PQ AGG Q+G + N AG A G+ G +
Sbjct: 296 PY--VPQPAGG------QYGHPETFKRHHPHPNR--AGGGAYGVPYLHGQPAPAPVPQTP 345
Query: 219 LAALASSQLKT----NHMPRNQ--NQNQNQHNRNNRDGPSQKTNQQQNQ-ITKEMTVPNE 271
+ A+ Q H P Q R P+ Q +T+++ +PN+
Sbjct: 346 MHFPAAPQAPYGGAGPHQPAPFVGGPQQPTPGRGPPTAPAPVGASMPGQPLTQQIYIPND 405
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
++GA+IGKGG KI EIR +SG++I+I +E +E SN+R +T+TGT + +A Y++
Sbjct: 406 MVGAIIGKGGAKINEIRHLSGSVIKI---NEPQESSNERLVTITGTAECNQMALYML 459
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 43/273 (15%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG++I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 197 LLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDACLPLSTERSLVILGVADAVHIAT 254
Query: 326 YLINMS-VELLRANLNGE------------------------------GGGESNMDDFSS 354
Y + ++ VE L G GG + + F
Sbjct: 255 YYVAVTLVEQLSERYGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPETFKR 314
Query: 355 DNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGG 414
+ P+ A G P P A + P A + GG GG
Sbjct: 315 HHPHPNRA--GGGAYGVPYLHGQPAPAPVPQTPMHFPAAPQ-APYGGAGPHQPAPFVGGP 371
Query: 415 SGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIY 474
+ G G P P G + + VG+IIGK G + ++R SGS I
Sbjct: 372 QQPTPGRGP-PTAPAPVGASMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIK 430
Query: 475 ISD--SSTPERIVTVIGSMD----SLFRAFSLI 501
I++ S+ ER+VT+ G+ + +L+ +S +
Sbjct: 431 INEPQESSNERLVTITGTAECNQMALYMLYSRL 463
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG++I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 197 LLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDACLPLSTERSLVILGVADAVHIAT 254
Query: 771 YLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 255 YYVAVTLVEQLSERYGG 271
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES + +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 106 ESSWVHIRAVISSPEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 164
Query: 136 AVTQAI 141
A +A
Sbjct: 165 AAAKAF 170
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES + +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 106 ESSWVHIRAVISSPEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 164
Query: 581 AVTQAI 586
A +A
Sbjct: 165 AAAKAF 170
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 71 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
+G + Q + ++ +P G+IIGKGG++I IR SG+ + + ++ +S ER V I
Sbjct: 387 VGASMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI-NEPQESSNERLVTI 445
Query: 131 KGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
G + A+Y + + SP P P P L G FG Q
Sbjct: 446 TGTAECNQMALYMLYSRLGWSP---------PFPDF---PSLPGKTFGAQ 483
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 516 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 575
+G + Q + ++ +P G+IIGKGG++I IR SG+ + + ++ +S ER V I
Sbjct: 387 VGASMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI-NEPQESSNERLVTI 445
Query: 576 KGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 625
G + A+Y + + SP P P P L G FG Q
Sbjct: 446 TGTAECNQMALYMLYSRLGWSP---------PFPDF---PSLPGKTFGAQ 483
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 232 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
+P + Q+ ++ +R G Q + + + + + VIGKGG + +IR++S
Sbjct: 80 LPVDTQPIQSTASQADRTGSDQPPQDESSWVHIRAVISSPEAATVIGKGGENVSQIRRLS 139
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
GA +S S + +R +T++G DA A A LI
Sbjct: 140 GAKCTVSDYS---RGAVERILTVSGPQDAAAKAFGLI 173
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
+P + Q+ ++ +R G Q + + + + + VIGKGG + +IR++S
Sbjct: 80 LPVDTQPIQSTASQADRTGSDQPPQDESSWVHIRAVISSPEAATVIGKGGENVSQIRRLS 139
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
GA +S S + +R +T++G DA A A LI
Sbjct: 140 GAKCTVSDYS---RGAVERILTVSGPQDAAAKAFGLI 173
>gi|259487459|tpe|CBF86155.1| TPA: KH domain RNA binding protein (AFU_orthologue; AFUA_2G04940)
[Aspergillus nidulans FGSC A4]
Length = 465
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 182/373 (48%), Gaps = 57/373 (15%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAF 168
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGG++I+ I++ SGA +
Sbjct: 169 GLIIRTL----NNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGARL 224
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 225 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 284
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G PD G A G G
Sbjct: 285 AVPGGMQVVPY--VPQPAGG------QYGH-------PDTFKRHHPGQARAGAGAYGVPY 329
Query: 655 MGGGLNAAALA--ALASSQLKTNHM---PRNQNQNQNQHNRNNRDGPSQKT----NQQQN 705
+ G A +A + +T + P R GP+
Sbjct: 330 LHGQHAPAPVAPQPMHYGAPQTPYAGAGPHQPTPYGAPQAAQPRGGPTPAAPVGGAMPGQ 389
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT +
Sbjct: 390 PLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQEC 446
Query: 766 IALAQYLINMSVE 778
+A Y++ +E
Sbjct: 447 NQMALYMLYSRLE 459
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 178/365 (48%), Gaps = 57/365 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
+E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 117 QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIRTL- 175
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
N+ +S+ LRL++P GSIIGKGG++I+ I++ SGA + + LP
Sbjct: 176 ---NNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGARLNASDACLP 232
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------T 157
STER + I GV DAV A Y + + +V+ P A
Sbjct: 233 LSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQV 292
Query: 158 IPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 217
+PY +PQ AGG Q+G PD G A G G + G A
Sbjct: 293 VPY--VPQPAGG------QYGH-------PDTFKRHHPGQARAGAGAYGVPYLHGQHAPA 337
Query: 218 ALA--ALASSQLKTNHM---PRNQNQNQNQHNRNNRDGPSQKT----NQQQNQITKEMTV 268
+A + +T + P R GP+ +T+++ +
Sbjct: 338 PVAPQPMHYGAPQTPYAGAGPHQPTPYGAPQAAQPRGGPTPAAPVGGAMPGQPLTQQIYI 397
Query: 269 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A Y++
Sbjct: 398 PNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMALYML 454
Query: 329 NMSVE 333
+E
Sbjct: 455 YSRLE 459
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGGT+I EI+ SGA R++ S S +R++ + G DA+ +A
Sbjct: 195 LLIPHILIGSIIGKGGTRIREIQDASGA--RLNASDACLPLSTERSLVILGVADAVHIAT 252
Query: 326 YLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 253 YYVAVTLVEQLTERFGG 269
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGGT+I EI+ SGA R++ S S +R++ + G DA+ +A
Sbjct: 195 LLIPHILIGSIIGKGGTRIREIQDASGA--RLNASDACLPLSTERSLVILGVADAVHIAT 252
Query: 771 YLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 253 YYVAVTLVEQLTERFGG 269
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
NQ++ ES I +R ++ + + ++IGKGG + IR SGA V SD + E
Sbjct: 94 NQSEQQRPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVE 152
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSP 152
R + + G DAV +A I + + P
Sbjct: 153 RILTVSGPQDAVAKAFGLIIRTLNNEP 179
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
Q+ + N I + ++ VIGKGG + +IR++SGA +S S + +R +
Sbjct: 99 QRPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYS---RGAVERIL 155
Query: 313 TMTGTPDAIALAQYLI 328
T++G DA+A A LI
Sbjct: 156 TVSGPQDAVAKAFGLI 171
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
Q+ + N I + ++ VIGKGG + +IR++SGA +S S + +R +
Sbjct: 99 QRPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYS---RGAVERIL 155
Query: 758 TMTGTPDAIALAQYLI 773
T++G DA+A A LI
Sbjct: 156 TVSGPQDAVAKAFGLI 171
>gi|320588068|gb|EFX00543.1| kh domain protein RNA-binding protein [Grosmannia clavigera kw1407]
Length = 375
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 191/363 (52%), Gaps = 48/363 (13%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T+
Sbjct: 42 YAQTQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI 96
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGS 545
G D++ +A++++ + + E L GNG + +L++ +Q G++IG+GG
Sbjct: 97 TGGCDAISKAYAVVARALLEGVPTMGMGGILQGNGTHPI---KLLISHNQMGTVIGRGGL 153
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + D+LP STER V ++G P+ + +A+++IC +VD +G T+
Sbjct: 154 KIKHIQDVSGVRMVAQKDILPQSTERIVEVQGTPEGIQKAVWEICKCLVDDWQRGTGTVL 213
Query: 605 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG---MGGGLNA 661
Y P+ + G +P +G+ +A + GG S G + N
Sbjct: 214 YNPVVRTQG----------------TSPTLGSGSIAPTSNYNSGGRSEYGNSRVTRTGNG 257
Query: 662 AALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQI-TKEMTVPNELIGA 720
A + ASS+ P N+ + + R GP ++Q N+I T+ +++P +++G
Sbjct: 258 ADFSNGASSR------PNNRRSDSDAAAR----GPPTH-DEQGNEIQTQNISIPADMVGC 306
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVE 778
+IG+ G+KI EIRK SGA I I+K+ +E + +R T+ G+ A A +L+ N+ E
Sbjct: 307 IIGRAGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGSAKANETALFLLYENLEAE 364
Query: 779 LLR 781
+R
Sbjct: 365 KMR 367
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 183/344 (53%), Gaps = 43/344 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ +A++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISKAYAVVARALL 115
Query: 62 EFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
E L GNG + +L++ +Q G++IG+GG +IK I++ SG + D+
Sbjct: 116 EGVPTMGMGGILQGNGTHPI---KLLISHNQMGTVIGRGGLKIKHIQDVSGVRMVAQKDI 172
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFG 178
LP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + G
Sbjct: 173 LPQSTERIVEVQGTPEGIQKAVWEICKCLVDDWQRGTGTVLYNPVVRTQG---------- 222
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGG---MGGGLNAAALAALASSQLKTNHMPRN 235
+P +G+ +A + GG S G + N A + ASS+ P N
Sbjct: 223 ------TSPTLGSGSIAPTSNYNSGGRSEYGNSRVTRTGNGADFSNGASSR------PNN 270
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
+ + + R GP ++Q N+I T+ +++P +++G +IG+ G+KI EIRK SGA
Sbjct: 271 RRSDSDAAAR----GPPTH-DEQGNEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGAR 325
Query: 295 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I I+K+ +E + +R T+ G+ A A +L+ N+ E +R
Sbjct: 326 ISIAKAPHDE--TGERMFTIMGSAKANETALFLLYENLEAEKMR 367
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 254 KTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +DR
Sbjct: 37 KTDEEYAQTQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVHDRV 93
Query: 312 ITMTGTPDAIALAQYLI 328
+T+TG DAI+ A ++
Sbjct: 94 LTITGGCDAISKAYAVV 110
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 699 KTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +DR
Sbjct: 37 KTDEEYAQTQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVHDRV 93
Query: 757 ITMTGTPDAIALAQYLI 773
+T+TG DAI+ A ++
Sbjct: 94 LTITGGCDAISKAYAVV 110
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 55 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
+I K EE+ + Q + LR IV + + G IIGKGG + +R+ +G
Sbjct: 34 IIPKTDEEYAQTQ------------LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAG 81
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
V S ++ +R + I G DA+++A + +++ P
Sbjct: 82 V-SKVVQGVHDRVLTITGGCDAISKAYAVVARALLEGVP 119
>gi|322707130|gb|EFY98709.1| KH domain RNA-binding protein [Metarhizium anisopliae ARSEF 23]
Length = 368
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 186/360 (51%), Gaps = 49/360 (13%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T+
Sbjct: 42 YAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI 96
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQ 546
G D++ RA++++ + + E +GG +S ++L++ +Q G+IIG+ G +
Sbjct: 97 TGECDAISRAYAIVARALLEGAPAMG--MGGIVQSNGTHPIKLLISHNQMGTIIGRQGLK 154
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPY 605
IK I++ SG + +MLP STER V ++G PD + +A+++IC +VD +G T+ Y
Sbjct: 155 IKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPDGIQRAVWEICKCLVDDWQRGTGTVLY 214
Query: 606 RPLPQNAGGPGLIGNQF--GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
P+ + G G +G+ + G S G+P + GN GG+
Sbjct: 215 NPVVRTQAGSGSLGSNYNNGGGRSDYGSPRVMRT-----------GNGADFSNGGVR--- 260
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 723
P ++ + + +R P+ N ++ Q T+ +++P +++G +IG
Sbjct: 261 --------------PFSRRSDSDAASRGP---PTHDENGEEIQ-TQNISIPADMVGCIIG 302
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
+ G+KI EIRK SGA I I+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 303 RAGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 360
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 178/341 (52%), Gaps = 44/341 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGECDAISRAYAIVARALL 115
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 116 EGAPAMG--MGGIVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEML 173
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQF-- 177
P STER V ++G PD + +A+++IC +VD +G T+ Y P+ + G G +G+ +
Sbjct: 174 PQSTERIVEVQGTPDGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRTQAGSGSLGSNYNN 233
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
G S G+P + GN GG+ P ++
Sbjct: 234 GGGRSDYGSPRVMRT-----------GNGADFSNGGVR-----------------PFSRR 265
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ + +R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I I
Sbjct: 266 SDSDAASRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 321
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 322 AKAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 360
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 251 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 34 PAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 90
Query: 309 DRTITMTGTPDAIALAQYLI 328
DR +T+TG DAI+ A ++
Sbjct: 91 DRVLTITGECDAISRAYAIV 110
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 696 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 34 PAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 90
Query: 754 DRTITMTGTPDAIALAQYLI 773
DR +T+TG DAI+ A ++
Sbjct: 91 DRVLTITGECDAISRAYAIV 110
>gi|170060296|ref|XP_001865738.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878802|gb|EDS42185.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 188
Score = 146 bits (368), Expect = 5e-32, Method: Composition-based stats.
Identities = 73/128 (57%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
Query: 23 ESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQL 82
+SG+KI ISD S PERIVTV GS ++++AF+LITK EE+ + G++Q I +
Sbjct: 4 KSGAKINISDGSCPERIVTVSGSRSAIYKAFTLITKKFEEWCSQFQDNTNAQGKTQ-IPI 62
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
RLIVPASQCGS+IGKGGS+IK IRE +G S+ VAS+MLPNSTER V + G D++TQ IY
Sbjct: 63 RLIVPASQCGSLIGKGGSKIKEIREITGCSIQVASEMLPNSTERAVTLSGSADSITQCIY 122
Query: 143 QICLIMVD 150
IC +M++
Sbjct: 123 HICCVMLE 130
Score = 146 bits (368), Expect = 5e-32, Method: Composition-based stats.
Identities = 73/128 (57%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
Query: 468 ESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQL 527
+SG+KI ISD S PERIVTV GS ++++AF+LITK EE+ + G++Q I +
Sbjct: 4 KSGAKINISDGSCPERIVTVSGSRSAIYKAFTLITKKFEEWCSQFQDNTNAQGKTQ-IPI 62
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
RLIVPASQCGS+IGKGGS+IK IRE +G S+ VAS+MLPNSTER V + G D++TQ IY
Sbjct: 63 RLIVPASQCGSLIGKGGSKIKEIREITGCSIQVASEMLPNSTERAVTLSGSADSITQCIY 122
Query: 588 QICLIMVD 595
IC +M++
Sbjct: 123 HICCVMLE 130
Score = 53.9 bits (128), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q + QI + VP G++IGKGG+KI EIR+I+G I++ +SE +S +R +T++G
Sbjct: 55 QGKTQIPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQV--ASEMLPNSTERAVTLSG 112
Query: 317 TPDAIALAQYLI 328
+ D+I Y I
Sbjct: 113 SADSITQCIYHI 124
Score = 53.9 bits (128), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q + QI + VP G++IGKGG+KI EIR+I+G I++ +SE +S +R +T++G
Sbjct: 55 QGKTQIPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQV--ASEMLPNSTERAVTLSG 112
Query: 762 TPDAIALAQYLI 773
+ D+I Y I
Sbjct: 113 SADSITQCIYHI 124
Score = 42.7 bits (99), Expect = 1.0, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLF 495
Q +R I+ + GS+IGK G +K++RE +G I ++ P ER VT+ GS DS+
Sbjct: 59 QIPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQVASEMLPNSTERAVTLSGSADSIT 118
Query: 496 RA-FSLITKNIEEFH 509
+ + + +E FH
Sbjct: 119 QCIYHICCVMLEIFH 133
Score = 39.7 bits (91), Expect = 8.0, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRA-FSLITKNI 60
+ GS+IGK G +K++RE +G I ++ P ER VT+ GS DS+ + + + +
Sbjct: 70 QCGSLIGKGGSKIKEIREITGCSIQVASEMLPNSTERAVTLSGSADSITQCIYHICCVML 129
Query: 61 EEFH 64
E FH
Sbjct: 130 EIFH 133
>gi|164655395|ref|XP_001728827.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
gi|159102713|gb|EDP41613.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
Length = 382
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 177/344 (51%), Gaps = 68/344 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
MR ++ + IIGK G + ++RE S +++ IS+S S PERI+TV G++D++ +AF
Sbjct: 87 MRALIITSDASVIIGKQGRHINEIRELSNARLNISESIPSNPERILTVSGALDAVSKAFG 146
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
L+ + I + +Q G S +R I+P S+ G+IIG+ GS+IK I+E SGA ++
Sbjct: 147 LLVRRINDEPFDQPSLPGSRAAS----IRFIIPNSRMGAIIGRQGSKIKEIQEASGARLH 202
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQN-AGGPGL 617
MLP STER ++I GV DA+ A+Y + +++ P +G+ +PYRP N A P L
Sbjct: 203 AGETMLPGSTERILSITGVADALHIAVYYVGATLLEHPDRGSNNLPYRPAAVNRALTPSL 262
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
+G+ N+P A + AL NS ALA++ + L+T
Sbjct: 263 VGSPL-------------NSPSASMLALS-ATNS---------PKALASVLTPGLQT--- 296
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
+++ +PN+L+G +IGKGG KI EIR++S
Sbjct: 297 -------------------------------QQIFIPNDLVGCIIGKGGQKINEIRQLSA 325
Query: 738 AMIRISKSSEEEE---DSNDRTITMTGTPDAIALAQYLINMSVE 778
+ I+I + + ++R +T+TG P I +A L+ +E
Sbjct: 326 SHIKIMERNAGIAAGGSGSERLVTITGPPPNIQMAVTLLYQRLE 369
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 172/332 (51%), Gaps = 68/332 (20%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G + ++RE S +++ IS+S S PERI+TV G++D++ +AF L+ + I + +
Sbjct: 99 IIGKQGRHINEIRELSNARLNISESIPSNPERILTVSGALDAVSKAFGLLVRRINDEPFD 158
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
Q G S +R I+P S+ G+IIG+ GS+IK I+E SGA ++ MLP STER
Sbjct: 159 QPSLPGSRAAS----IRFIIPNSRMGAIIGRQGSKIKEIQEASGARLHAGETMLPGSTER 214
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQN-AGGPGLIGNQFGMQNSLM 184
++I GV DA+ A+Y + +++ P +G+ +PYRP N A P L+G+
Sbjct: 215 ILSITGVADALHIAVYYVGATLLEHPDRGSNNLPYRPAAVNRALTPSLVGSPL------- 267
Query: 185 GAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHN 244
N+P A + AL NS ALA++ + L+T
Sbjct: 268 ------NSPSASMLALS-ATNS---------PKALASVLTPGLQT--------------- 296
Query: 245 RNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 304
+++ +PN+L+G +IGKGG KI EIR++S + I+I + +
Sbjct: 297 -------------------QQIFIPNDLVGCIIGKGGQKINEIRQLSASHIKIMERNAGI 337
Query: 305 E---DSNDRTITMTGTPDAIALAQYLINMSVE 333
++R +T+TG P I +A L+ +E
Sbjct: 338 AAGGSGSERLVTITGPPPNIQMAVTLLYQRLE 369
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 59/251 (23%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+PN +GA+IG+ G+KI EI++ SGA R+ S +R +++TG DA+ +A
Sbjct: 171 RFIIPNSRMGAIIGRQGSKIKEIQEASGA--RLHAGETMLPGSTERILSITGVADALHIA 228
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
Y + ++ L G +N+ + N + L G ++P A+ L
Sbjct: 229 VYYVGATL------LEHPDRGSNNLPYRPAAVNRALTPSLVGSPLNSPSASML------- 275
Query: 385 TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRH 444
AL+A S AL A++ T G+Q +
Sbjct: 276 ----ALSATNSPKAL-------------------------------ASVLTPGLQTQQIF 300
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--------STPERIVTVIGSMDSLFR 496
I VG IIGK G+ + ++R+ S S I I + S ER+VT+ G ++
Sbjct: 301 I-PNDLVGCIIGKGGQKINEIRQLSASHIKIMERNAGIAAGGSGSERLVTITGPPPNIQM 359
Query: 497 AFSLITKNIEE 507
A +L+ + +E+
Sbjct: 360 AVTLLYQRLEQ 370
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ S IIGK G I IRE S A + + S+ +P++ ER + + G DAV++
Sbjct: 85 IVMRALIITSDASVIIGKQGRHINEIRELSNARLNI-SESIPSNPERILTVSGALDAVSK 143
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
A + + D P ++P G +F + NS MGA
Sbjct: 144 AFGLLVRRINDEPFDQPSLP---------GSRAASIRFIIPNSRMGA 181
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I +R ++ S IIGK G I IRE S A + + S+ +P++ ER + + G DAV++
Sbjct: 85 IVMRALIITSDASVIIGKQGRHINEIRELSNARLNI-SESIPSNPERILTVSGALDAVSK 143
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 631
A + + D P ++P G +F + NS MGA
Sbjct: 144 AFGLLVRRINDEPFDQPSLP---------GSRAASIRFIIPNSRMGA 181
>gi|119480179|ref|XP_001260118.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408272|gb|EAW18221.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 464
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 179/367 (48%), Gaps = 54/367 (14%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 113 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAF 172
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA +
Sbjct: 173 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGARL 228
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP S+ER + I GV D+V A Y + + +V+ P A
Sbjct: 229 NASDSCLPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 288
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G N AG A G+ G
Sbjct: 289 AVPGGMQVVPY--VPQPAGG------QYGHPEHFKRHHPHPNRAAAG--AYGVPYLHGQP 338
Query: 655 MGGGLNAAALAALASSQLKTN----HMPRNQNQNQNQHNRNNRDGPSQKTN----QQQNQ 706
+ AL A+ H P Q R P+ T
Sbjct: 339 APAPVAQPALHYGAAPHAPYAGAGPHQPAPYGAPQPAQARG---APTPATPVGGVMPGQP 395
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT +
Sbjct: 396 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECN 452
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 453 QMALYML 459
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 176/362 (48%), Gaps = 54/362 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI +
Sbjct: 118 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIR 177
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA + +
Sbjct: 178 TL----NNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNASDS 233
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA--------------- 156
LP S+ER + I GV D+V A Y + + +V+ P A
Sbjct: 234 CLPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGG 293
Query: 157 --TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
+PY +PQ AGG Q+G N AG A G+ G +
Sbjct: 294 MQVVPY--VPQPAGG------QYGHPEHFKRHHPHPNRAAAG--AYGVPYLHGQPAPAPV 343
Query: 215 NAAALAALASSQLKTN----HMPRNQNQNQNQHNRNNRDGPSQKTN----QQQNQITKEM 266
AL A+ H P Q R P+ T +T+++
Sbjct: 344 AQPALHYGAAPHAPYAGAGPHQPAPYGAPQPAQARG---APTPATPVGGVMPGQPLTQQI 400
Query: 267 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 326
+PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A Y
Sbjct: 401 YIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMALY 457
Query: 327 LI 328
++
Sbjct: 458 ML 459
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N D PS Q + +P+ LIG++IGKGG++I EI++ SGA R++ S
Sbjct: 180 NNEPLDAPS---TAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGA--RLNASDSC 234
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
S++R++ + G D++ +A Y + ++ VE L G
Sbjct: 235 LPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGG 273
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N D PS Q + +P+ LIG++IGKGG++I EI++ SGA R++ S
Sbjct: 180 NNEPLDAPS---TAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGA--RLNASDSC 234
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S++R++ + G D++ +A Y + ++ VE L G
Sbjct: 235 LPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGG 273
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 108 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 166
Query: 136 AVTQAI 141
AV +A
Sbjct: 167 AVAKAF 172
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES I +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 108 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 166
Query: 581 AVTQAI 586
AV +A
Sbjct: 167 AVAKAF 172
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 238 QNQNQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
Q+ H P Q+ Q ++ I + ++ VIGKGG + +IR++SGA
Sbjct: 87 QSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCT 146
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 356
+S S + +R +T++G DA+A A LI ++ N
Sbjct: 147 VSDYS---RGAVERILTVSGPQDAVAKAFGLIIRTL-----------------------N 180
Query: 357 NLPSSAPLAGLNASNPLAAALPQL 380
N P AP + + PL +P L
Sbjct: 181 NEPLDAPSTAQSKTYPLRLLIPHL 204
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 683 QNQNQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
Q+ H P Q+ Q ++ I + ++ VIGKGG + +IR++SGA
Sbjct: 87 QSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCT 146
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
+S S + +R +T++G DA+A A LI ++ N
Sbjct: 147 VSDYS---RGAVERILTVSGPQDAVAKAFGLIIRTL-----------------------N 180
Query: 802 NLPSSAPLAGLNASNPLAAALPQL 825
N P AP + + PL +P L
Sbjct: 181 NEPLDAPSTAQSKTYPLRLLIPHL 204
>gi|70989551|ref|XP_749625.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
gi|66847256|gb|EAL87587.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
Length = 464
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 179/367 (48%), Gaps = 54/367 (14%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 113 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAF 172
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA +
Sbjct: 173 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGARL 228
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP S+ER + I GV D+V A Y + + +V+ P A
Sbjct: 229 NASDSCLPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 288
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G N AG A G+ G
Sbjct: 289 AVPGGMQVVPY--VPQPAGG------QYGHPEHFKRHHHHPNRAAAG--AYGVPYLHGQP 338
Query: 655 MGGGLNAAALAALASSQLKTN----HMPRNQNQNQNQHNRNNRDGPSQKTN----QQQNQ 706
+ AL A+ H P Q R P+ T
Sbjct: 339 APAPVAQPALHYGAAPHAPYAGAGPHQPAPYGAPQPAQARG---APTPATPVGGVMPGQP 395
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT +
Sbjct: 396 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECN 452
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 453 QMALYML 459
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 176/362 (48%), Gaps = 54/362 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI +
Sbjct: 118 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIR 177
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA + +
Sbjct: 178 TL----NNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNASDS 233
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA--------------- 156
LP S+ER + I GV D+V A Y + + +V+ P A
Sbjct: 234 CLPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGG 293
Query: 157 --TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
+PY +PQ AGG Q+G N AG A G+ G +
Sbjct: 294 MQVVPY--VPQPAGG------QYGHPEHFKRHHHHPNRAAAG--AYGVPYLHGQPAPAPV 343
Query: 215 NAAALAALASSQLKTN----HMPRNQNQNQNQHNRNNRDGPSQKTN----QQQNQITKEM 266
AL A+ H P Q R P+ T +T+++
Sbjct: 344 AQPALHYGAAPHAPYAGAGPHQPAPYGAPQPAQARG---APTPATPVGGVMPGQPLTQQI 400
Query: 267 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 326
+PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A Y
Sbjct: 401 YIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMALY 457
Query: 327 LI 328
++
Sbjct: 458 ML 459
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N D PS Q + +P+ LIG++IGKGG++I EI++ SGA R++ S
Sbjct: 180 NNEPLDAPS---TAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGA--RLNASDSC 234
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
S++R++ + G D++ +A Y + ++ VE L G
Sbjct: 235 LPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGG 273
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N D PS Q + +P+ LIG++IGKGG++I EI++ SGA R++ S
Sbjct: 180 NNEPLDAPS---TAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGA--RLNASDSC 234
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S++R++ + G D++ +A Y + ++ VE L G
Sbjct: 235 LPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGG 273
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 108 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 166
Query: 136 AVTQAIYQICLIMVDSP 152
AV +A I + + P
Sbjct: 167 AVAKAFGLIIRTLNNEP 183
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES I +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 108 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 166
Query: 581 AVTQAIYQICLIMVDSP 597
AV +A I + + P
Sbjct: 167 AVAKAFGLIIRTLNNEP 183
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 238 QNQNQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
Q+ H P Q+ Q ++ I + ++ VIGKGG + +IR++SGA
Sbjct: 87 QSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCT 146
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 356
+S S + +R +T++G DA+A A LI ++ N
Sbjct: 147 VSDYS---RGAVERILTVSGPQDAVAKAFGLIIRTL-----------------------N 180
Query: 357 NLPSSAPLAGLNASNPLAAALPQL 380
N P AP + + PL +P L
Sbjct: 181 NEPLDAPSTAQSKTYPLRLLIPHL 204
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 683 QNQNQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
Q+ H P Q+ Q ++ I + ++ VIGKGG + +IR++SGA
Sbjct: 87 QSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCT 146
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
+S S + +R +T++G DA+A A LI ++ N
Sbjct: 147 VSDYS---RGAVERILTVSGPQDAVAKAFGLIIRTL-----------------------N 180
Query: 802 NLPSSAPLAGLNASNPLAAALPQL 825
N P AP + + PL +P L
Sbjct: 181 NEPLDAPSTAQSKTYPLRLLIPHL 204
>gi|159129031|gb|EDP54145.1| KH domain RNA binding protein [Aspergillus fumigatus A1163]
Length = 464
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 179/367 (48%), Gaps = 54/367 (14%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 113 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAF 172
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA +
Sbjct: 173 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGARL 228
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP S+ER + I GV D+V A Y + + +V+ P A
Sbjct: 229 NASDSCLPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 288
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G N AG A G+ G
Sbjct: 289 AVPGGMQVVPY--VPQPAGG------QYGHPEHFKRHHPHPNRAAAG--AYGVPYLHGQP 338
Query: 655 MGGGLNAAALAALASSQLKTN----HMPRNQNQNQNQHNRNNRDGPSQKTN----QQQNQ 706
+ AL A+ H P Q R P+ T
Sbjct: 339 APAPVAQPALHYGAAPHAPYAGAGPHQPAPYGAPQPAQARG---APTPATPVGGVMPGQP 395
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT +
Sbjct: 396 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECN 452
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 453 QMALYML 459
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 176/362 (48%), Gaps = 54/362 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI +
Sbjct: 118 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIR 177
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGGS+I+ I+E SGA + +
Sbjct: 178 TL----NNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGARLNASDS 233
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA--------------- 156
LP S+ER + I GV D+V A Y + + +V+ P A
Sbjct: 234 CLPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGG 293
Query: 157 --TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
+PY +PQ AGG Q+G N AG A G+ G +
Sbjct: 294 MQVVPY--VPQPAGG------QYGHPEHFKRHHPHPNRAAAG--AYGVPYLHGQPAPAPV 343
Query: 215 NAAALAALASSQLKTN----HMPRNQNQNQNQHNRNNRDGPSQKTN----QQQNQITKEM 266
AL A+ H P Q R P+ T +T+++
Sbjct: 344 AQPALHYGAAPHAPYAGAGPHQPAPYGAPQPAQARG---APTPATPVGGVMPGQPLTQQI 400
Query: 267 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 326
+PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A Y
Sbjct: 401 YIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMALY 457
Query: 327 LI 328
++
Sbjct: 458 ML 459
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N D PS Q + +P+ LIG++IGKGG++I EI++ SGA R++ S
Sbjct: 180 NNEPLDAPS---TAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGA--RLNASDSC 234
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
S++R++ + G D++ +A Y + ++ VE L G
Sbjct: 235 LPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGG 273
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N D PS Q + +P+ LIG++IGKGG++I EI++ SGA R++ S
Sbjct: 180 NNEPLDAPS---TAQSKTYPLRLLIPHLLIGSIIGKGGSRIREIQEASGA--RLNASDSC 234
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S++R++ + G D++ +A Y + ++ VE L G
Sbjct: 235 LPLSSERSLVILGVADSVHIATYYVAVTLVEQLTERFGG 273
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 108 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 166
Query: 136 AVTQAI 141
AV +A
Sbjct: 167 AVAKAF 172
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES I +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 108 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 166
Query: 581 AVTQAI 586
AV +A
Sbjct: 167 AVAKAF 172
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 238 QNQNQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
Q+ H P Q+ Q ++ I + ++ VIGKGG + +IR++SGA
Sbjct: 87 QSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCT 146
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 356
+S S + +R +T++G DA+A A LI ++ N
Sbjct: 147 VSDYS---RGAVERILTVSGPQDAVAKAFGLIIRTL-----------------------N 180
Query: 357 NLPSSAPLAGLNASNPLAAALPQL 380
N P AP + + PL +P L
Sbjct: 181 NEPLDAPSTAQSKTYPLRLLIPHL 204
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 683 QNQNQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
Q+ H P Q+ Q ++ I + ++ VIGKGG + +IR++SGA
Sbjct: 87 QSTASHGERATSQPEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCT 146
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDN 801
+S S + +R +T++G DA+A A LI ++ N
Sbjct: 147 VSDYS---RGAVERILTVSGPQDAVAKAFGLIIRTL-----------------------N 180
Query: 802 NLPSSAPLAGLNASNPLAAALPQL 825
N P AP + + PL +P L
Sbjct: 181 NEPLDAPSTAQSKTYPLRLLIPHL 204
>gi|225681071|gb|EEH19355.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 495
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 187/389 (48%), Gaps = 58/389 (14%)
Query: 426 QGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPER 483
Q P+ Q +R ++ E + IGK GE V ++R SG+K +SD S ER
Sbjct: 123 QPPSQHTTQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVER 182
Query: 484 IVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
I+TV G D++ +AF LI + + N+ +S+ LRL++P GSIIGK
Sbjct: 183 ILTVSGMQDAVAKAFGLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKS 238
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS------- 596
G +I+ I+E SGA + + LP STER + I GV DAV A Y + + +V+
Sbjct: 239 GVRIREIQEASGARLNASDSCLPLSTERTLIILGVADAVHIATYYVAVTLVEQLTERFGG 298
Query: 597 PPKGA-----------------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPL 639
P A +PY +PQ AGG Q+G ++ G +
Sbjct: 299 PAASAYATRSGGPAGVVPGGMQVVPY--IPQPAGG------QYGHPDTFKRHQPQGTRAV 350
Query: 640 AGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK 699
+ G+ G + AL ASS+ P +Q + PSQ
Sbjct: 351 S-TGGYGVPYVHGQPGQPQMPQQALHYGASSR------PGYTGAGPHQPSPYGAPQPSQV 403
Query: 700 TNQQQNQ----------ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 749
+Q +T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +
Sbjct: 404 HGAPSSQPVGGVVPGAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQ 460
Query: 750 EDSNDRTITMTGTPDAIALAQYLINMSVE 778
++SN+R +T+TGTP+ +A Y++ +E
Sbjct: 461 DNSNERLVTITGTPECNQMALYMLYSRLE 489
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 179/365 (49%), Gaps = 58/365 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 147 EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 204
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 205 --NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPL 262
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
STER + I GV DAV A Y + + +V+ P A +
Sbjct: 263 STERTLIILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVV 322
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 218
PY +PQ AGG Q+G ++ G ++ G+ G + A
Sbjct: 323 PY--IPQPAGG------QYGHPDTFKRHQPQGTRAVS-TGGYGVPYVHGQPGQPQMPQQA 373
Query: 219 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ----------ITKEMTV 268
L ASS+ P +Q + PSQ +Q +T+++ +
Sbjct: 374 LHYGASSR------PGYTGAGPHQPSPYGAPQPSQVHGAPSSQPVGGVVPGAPVTQQIFI 427
Query: 269 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+ +A Y++
Sbjct: 428 PNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECNQMALYML 484
Query: 329 NMSVE 333
+E
Sbjct: 485 YSRLE 489
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 224 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLIILGVADAVHIAT 281
Query: 326 YLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 282 YYVAVTLVEQLTERFGG 298
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 224 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLIILGVADAVHIAT 281
Query: 771 YLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 282 YYVAVTLVEQLTERFGG 298
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ +++ + IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 191
Query: 136 AVTQAI 141
AV +A
Sbjct: 192 AVAKAF 197
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 241 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+Q++R + PSQ T Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRASSQPPSQHTTQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 360 SSAPLAGLNASNPLAAALPQL 380
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 686 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
+Q++R + PSQ T Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRASSQPPSQHTTQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 804
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 805 SSAPLAGLNASNPLAAALPQL 825
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
>gi|116192195|ref|XP_001221910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181728|gb|EAQ89196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 375
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 190/362 (52%), Gaps = 49/362 (13%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 44 EYAQTQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVYDRVLT 98
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
+ G +++ RA++++ + + E +GG +S ++L++ +Q G+IIG+ G
Sbjct: 99 ITGGCEAISRAYAVVARALLEGAPTIG--MGGVVQSNGTHPIKLLISHNQMGTIIGRQGL 156
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + +MLP STER V ++G P+ + +AI++IC +VD +GA T+
Sbjct: 157 KIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAIWEICKCLVDDWQRGAGTVL 216
Query: 605 YRPLPQNAG---GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNA 661
Y P+ + G PG+ G +Q+ AP GG+ G G +
Sbjct: 217 YNPVVRTQGAGAAPGVTGTTNFVQDR---AP--------------YGGSRVTRTGNGADF 259
Query: 662 AALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAV 721
+N PR N+ ++ + R P+ N ++ Q T+ +++P +++G +
Sbjct: 260 ------------SNGGPRPYNR-RSDSDAAARGPPTHDENGEEIQ-TQNISIPADMVGCI 305
Query: 722 IGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVEL 779
IG+GG+KI EIRK SGA I I+K+ +E + +R T+ G+ A A +L+ N+ E
Sbjct: 306 IGRGGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGSAKANERALFLLYENLEAEK 363
Query: 780 LR 781
+R
Sbjct: 364 MR 365
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 182/342 (53%), Gaps = 44/342 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G +++ RA++++ + +
Sbjct: 59 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVYDRVLTITGGCEAISRAYAVVARALL 118
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 119 EGAPTIG--MGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEML 176
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAG---GPGLIGNQ 176
P STER V ++G P+ + +AI++IC +VD +GA T+ Y P+ + G PG+ G
Sbjct: 177 PQSTERIVEVQGTPEGIQRAIWEICKCLVDDWQRGAGTVLYNPVVRTQGAGAAPGVTGTT 236
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+Q+ AP GG+ G G + +N PR
Sbjct: 237 NFVQDR---AP--------------YGGSRVTRTGNGADF------------SNGGPRPY 267
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N+ ++ + R P+ N ++ Q T+ +++P +++G +IG+GG+KI EIRK SGA I
Sbjct: 268 NR-RSDSDAAARGPPTHDENGEEIQ-TQNISIPADMVGCIIGRGGSKISEIRKTSGARIS 325
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K+ +E + +R T+ G+ A A +L+ N+ E +R
Sbjct: 326 IAKAPHDE--TGERMFTIMGSAKANERALFLLYENLEAEKMR 365
Score = 39.3 bits (90), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 251 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK +
Sbjct: 37 PAPKTDEEYAQTQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVY 93
Query: 309 DRTITMTGTPDAIALAQYLI 328
DR +T+TG +AI+ A ++
Sbjct: 94 DRVLTITGGCEAISRAYAVV 113
Score = 39.3 bits (90), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 696 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK +
Sbjct: 37 PAPKTDEEYAQTQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVY 93
Query: 754 DRTITMTGTPDAIALAQYLI 773
DR +T+TG +AI+ A ++
Sbjct: 94 DRVLTITGGCEAISRAYAVV 113
>gi|367027192|ref|XP_003662880.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
gi|347010149|gb|AEO57635.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
Length = 374
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 187/366 (51%), Gaps = 58/366 (15%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LREE+G K +S +R++T
Sbjct: 44 EYAQTQLT-----LRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLT 98
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ------LRLIVPASQCGSII 540
+ G +++ RA+S++ +++ E +GG +IQ ++L++ +Q G+II
Sbjct: 99 ISGGCEAISRAYSVVARSLLEGAPTMG--MGG-----VIQNNGTHPIKLLISHNQMGTII 151
Query: 541 GKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG 600
G+ G +IK I++ SG + +MLP STER V ++G P+ + +A+++IC +VD +G
Sbjct: 152 GRQGLKIKYIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAVWEICKCLVDDWQRG 211
Query: 601 A-TIPYRPL--PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
T+ Y P+ Q G PG+ G MQ+ AP G+ + GN GG
Sbjct: 212 TGTVLYNPVVRTQGVGAPGISGGSSYMQDR---APYGGSR-------VTRTGNGADFSGG 261
Query: 658 GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNEL 717
G P + + + R P+ N ++ Q T+ +++P ++
Sbjct: 262 G-----------------SRPYTRRSDSDPAARGP---PTHDENGEEIQ-TQNISIPADM 300
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NM 775
+G +IG+ G+KI EIRK SGA I I+K+ +E + +R T+ G+ A A +L+ N+
Sbjct: 301 VGCIIGRAGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGSAKANETALFLLYENL 358
Query: 776 SVELLR 781
E +R
Sbjct: 359 EAEKMR 364
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 179/346 (51%), Gaps = 53/346 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LREE+G K +S +R++T+ G +++ RA+S++ +++
Sbjct: 59 KEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTISGGCEAISRAYSVVARSLL 118
Query: 62 EFHKNQNKHLGGNGESQLIQ------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
E +GG +IQ ++L++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 119 EGAPTMG--MGG-----VIQNNGTHPIKLLISHNQMGTIIGRQGLKIKYIQDVSGVRMVA 171
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPL--PQNAGGPGL 172
+MLP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ Q G PG+
Sbjct: 172 QKEMLPQSTERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRTQGVGAPGI 231
Query: 173 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
G MQ+ AP G+ + GN GGG
Sbjct: 232 SGGSSYMQDR---APYGGSR-------VTRTGNGADFSGGG-----------------SR 264
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P + + + R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SG
Sbjct: 265 PYTRRSDSDPAARGP---PTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKTSG 320
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
A I I+K+ +E + +R T+ G+ A A +L+ N+ E +R
Sbjct: 321 ARISIAKAPHDE--TGERMFTIMGSAKANETALFLLYENLEAEKMR 364
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 186/356 (52%), Gaps = 49/356 (13%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T+
Sbjct: 45 YAESQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI 99
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKG 543
G DS+ RA+S++ K + E +GG NG + +L++ +Q G+IIG+
Sbjct: 100 SGGCDSISRAYSIVAKALLEGAPQMG--MGGVVSNNGTHPI---KLLISHNQMGTIIGRQ 154
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-T 602
G +IK I++ SG + +MLP STER V ++G P+ + +AI++IC +VD +G T
Sbjct: 155 GLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGNPEGIQKAIWEICKCLVDDWARGTGT 214
Query: 603 IPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 662
+ Y P+ + GN GM +G G G + + GN G + +
Sbjct: 215 VLYNPMVRTQ-----TGNSGGMSQGNVG----GTGREYGSSRVMRTGN-----GADFSES 260
Query: 663 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 722
A PR+ N+ +++ + R P+ N ++ Q T+ +++P +++G +I
Sbjct: 261 A--------------PRSYNR-RSESDAAQRGPPTHDENGEELQ-TQNISIPADMVGCII 304
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
G+ G+KI EIRK SGA I I+KS +E + +R T+ GT A A YL+ ++E
Sbjct: 305 GRAGSKISEIRKTSGARISIAKSPHDE--TGERMFTIMGTAKANDSALYLLYENLE 358
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 178/337 (52%), Gaps = 44/337 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G DS+ RA+S++ K +
Sbjct: 59 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTISGGCDSISRAYSIVAKALL 118
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + +L++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 119 EGAPQMG--MGGVVSNNGTHPI---KLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQK 173
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +AI++IC +VD +G T+ Y P+ + GN
Sbjct: 174 EMLPQSTERIVEVQGNPEGIQKAIWEICKCLVDDWARGTGTVLYNPMVRTQ-----TGNS 228
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
GM +G G G + + GN G + +A PR+
Sbjct: 229 GGMSQGNVG----GTGREYGSSRVMRTGN-----GADFSESA--------------PRSY 265
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N+ +++ + R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I
Sbjct: 266 NR-RSESDAAQRGPPTHDENGEELQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGARIS 323
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I+KS +E + +R T+ GT A A YL+ ++E
Sbjct: 324 IAKSPHDE--TGERMFTIMGTAKANDSALYLLYENLE 358
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 176/363 (48%), Gaps = 60/363 (16%)
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSM 491
+T Q MR ++ + IIGKSG+ + ++R++S +++ IS+ PERI+TV G +
Sbjct: 107 ETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPL 166
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
D++ +AF LI + I + +Q G S+ + +R IVP S+ GS+IGK GS+IK I+
Sbjct: 167 DAVSKAFGLIVRRINDEPFDQPSVPG----SKSVTIRFIVPNSRMGSVIGKQGSKIKEIQ 222
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQ 610
E SGA + MLP STER ++I GV DAV A+Y + I+++ + A +PYRP
Sbjct: 223 EASGARLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGTILLEHQDRNANNLPYRP--- 279
Query: 611 NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASS 670
AGGP P G NP A G G A +
Sbjct: 280 TAGGPS------------TRPPAPGANPYAA---------PQQPFGYGAPAPPFGGAPAG 318
Query: 671 QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
+P P +T Q + +PN+L+G +IGKGG+KI
Sbjct: 319 AGGAPQLP-----------------PGSQTQQ--------IFIPNDLVGCIIGKGGSKIN 353
Query: 731 EIRKISGAMIRISK---SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 787
EIR +S + I+I + N+R +T+TG P I +A L+ +E + L +
Sbjct: 354 EIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLLYQRLEQEKMRL-AQ 412
Query: 788 GGG 790
GG
Sbjct: 413 GGA 415
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 168/343 (48%), Gaps = 60/343 (17%)
Query: 9 IIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGKSG+ + ++R++S +++ IS+ PERI+TV G +D++ +AF LI + I + +
Sbjct: 127 IIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPLDAVSKAFGLIVRRINDEPFD 186
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
Q G S+ + +R IVP S+ GS+IGK GS+IK I+E SGA + MLP STER
Sbjct: 187 QPSVPG----SKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPGSTER 242
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGMQNSLMG 185
++I GV DAV A+Y + I+++ + A +PYRP AGGP
Sbjct: 243 VLSISGVADAVHIAVYYVGTILLEHQDRNANNLPYRP---TAGGPS------------TR 287
Query: 186 APDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNR 245
P G NP A G G A + +P
Sbjct: 288 PPAPGANPYAA---------PQQPFGYGAPAPPFGGAPAGAGGAPQLP------------ 326
Query: 246 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK---SSE 302
P +T Q + +PN+L+G +IGKGG+KI EIR +S + I+I +
Sbjct: 327 -----PGSQTQQ--------IFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIA 373
Query: 303 EEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
N+R +T+TG P I +A L+ +E + L +GG
Sbjct: 374 AGGSGNERLVTITGPPPNIQMAVSLLYQRLEQEKMRL-AQGGA 415
>gi|322698395|gb|EFY90165.1| KH domain RNA-binding protein [Metarhizium acridum CQMa 102]
Length = 367
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 182/368 (49%), Gaps = 66/368 (17%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T+
Sbjct: 42 YAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI 96
Query: 488 IGSMDSLFRAFSLITKNIEE---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGS 538
G D++ RA++++ + + E ++ HL ++L++ +Q G+
Sbjct: 97 TGECDAISRAYAIVARALLEGAPAMGMGGIVQSNGTHLSSTA------IKLLISHNQMGT 150
Query: 539 IIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
IIG+ G +IK I++ SG + +MLP STER V ++G PD + +A+++IC +VD
Sbjct: 151 IIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPDGIQRAVWEICKCLVDDWQ 210
Query: 599 KGA-TIPYRPLPQNAGGPGLIGNQF--GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
+G T+ Y P+ + G G +G+ + G S G+P + GN
Sbjct: 211 RGTGTVLYNPVVRTQAGSGGLGSNYNNGGGRSDYGSPRVMRT-----------GNGADFS 259
Query: 656 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
GG+ P ++ + + +R P+ N ++ Q T+ +++P
Sbjct: 260 NGGVR-----------------PFSRRSDSDAASRGP---PTHDENGEEIQ-TQNISIPA 298
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI-- 773
+++G +IG+ G+KI EIRK SGA I I+K+ E R T+ GT A A +L+
Sbjct: 299 DMVGCIIGRAGSKISEIRKTSGARISIAKTGE-------RMFTIMGTAKANESALFLLYE 351
Query: 774 NMSVELLR 781
N+ E +R
Sbjct: 352 NLEAEKMR 359
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 174/349 (49%), Gaps = 61/349 (17%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGECDAISRAYAIVARALL 115
Query: 62 E---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
E ++ HL ++L++ +Q G+IIG+ G +IK I++ SG
Sbjct: 116 EGAPAMGMGGIVQSNGTHLSSTA------IKLLISHNQMGTIIGRQGLKIKHIQDVSGVR 169
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPG 171
+ +MLP STER V ++G PD + +A+++IC +VD +G T+ Y P+ + G G
Sbjct: 170 MVAQKEMLPQSTERIVEVQGTPDGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRTQAGSG 229
Query: 172 LIGNQF--GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 229
+G+ + G S G+P + GN GG+
Sbjct: 230 GLGSNYNNGGGRSDYGSPRVMRT-----------GNGADFSNGGVR-------------- 264
Query: 230 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
P ++ + + +R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK
Sbjct: 265 ---PFSRRSDSDAASRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRK 317
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
SGA I I+K+ E R T+ GT A A +L+ N+ E +R
Sbjct: 318 TSGARISIAKTGE-------RMFTIMGTAKANESALFLLYENLEAEKMR 359
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 243 HNRNNRDG-PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+R DG P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK
Sbjct: 25 EDRRGPDGEPAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK 84
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+ +DR +T+TG DAI+ A ++
Sbjct: 85 VV---QGVHDRVLTITGECDAISRAYAIV 110
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 688 HNRNNRDG-PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
+R DG P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK
Sbjct: 25 EDRRGPDGEPAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSK 84
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+ +DR +T+TG DAI+ A ++
Sbjct: 85 VV---QGVHDRVLTITGECDAISRAYAIV 110
>gi|407917412|gb|EKG10721.1| K-like protein [Macrophomina phaseolina MS6]
Length = 488
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 182/374 (48%), Gaps = 60/374 (16%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R I+ E ++IGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF
Sbjct: 133 HVRAIISSAEAATVIGKGGENVTQIRRMSGAKCTVSDYSRGAVERILTVSGLVDAVAKAF 192
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N++ + +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 193 GLIIRTL----NNEDLNSPSTPQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARL 248
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + + GV DAV A Y + +V+ P A
Sbjct: 249 NASDSCLPLSTERSLVVLGVADAVHIATYYVGSTLVEQLTERFGGPAASAYATRSGGPAG 308
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLM-GAPDMGNNPLAGLAALGLGGNSGG 653
+PY +PQ AGG Q+G ++ P P AG G
Sbjct: 309 VVPGGMQVVPY--VPQPAGG------QWGPPDTFHRKGPQAQRTPAAGY---------GA 351
Query: 654 GMGGGLNAAALAALASSQLKTNHMPRNQNQNQ-NQHNRNNRDGPSQKTNQQQ-------- 704
M G A L H +Q Q+ + PS Q
Sbjct: 352 PMHGQYPQQPQAPLHYGAGSPRHAYTGAGPHQPQQYGAPHVAQPSHAGQPAQPMQGMMPG 411
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 412 QPMTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTQE 468
Query: 765 AIALAQYLINMSVE 778
+A Y++ +E
Sbjct: 469 CNQMALYMLYSRLE 482
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 178/365 (48%), Gaps = 60/365 (16%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF LI + +
Sbjct: 142 EAATVIGKGGENVTQIRRMSGAKCTVSDYSRGAVERILTVSGLVDAVAKAFGLIIRTL-- 199
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N++ + +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 200 --NNEDLNSPSTPQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPL 257
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
STER + + GV DAV A Y + +V+ P A +
Sbjct: 258 STERSLVVLGVADAVHIATYYVGSTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVV 317
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLM-GAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 217
PY +PQ AGG Q+G ++ P P AG G M G
Sbjct: 318 PY--VPQPAGG------QWGPPDTFHRKGPQAQRTPAAGY---------GAPMHGQYPQQ 360
Query: 218 ALAALASSQLKTNHMPRNQNQNQ-NQHNRNNRDGPSQKTNQQQ--------NQITKEMTV 268
A L H +Q Q+ + PS Q +T+++ +
Sbjct: 361 PQAPLHYGAGSPRHAYTGAGPHQPQQYGAPHVAQPSHAGQPAQPMQGMMPGQPMTQQIFI 420
Query: 269 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT + +A Y++
Sbjct: 421 PNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTQECNQMALYML 477
Query: 329 NMSVE 333
+E
Sbjct: 478 YSRLE 482
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 121/301 (40%), Gaps = 49/301 (16%)
Query: 246 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 305
NN D S T Q + + + +P+ LIG++IGK G +I EI++ SGA R++ S
Sbjct: 200 NNEDLNSPSTPQSKTYPLR-LLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDSCLP 256
Query: 306 DSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNGE---------------------- 342
S +R++ + G DA+ +A Y + + VE L G
Sbjct: 257 LSTERSLVVLGVADAVHIATYYVGSTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQV 316
Query: 343 --------GGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALT 394
GG D F P AG A P+ PQ Q GA +
Sbjct: 317 VPYVPQPAGGQWGPPDTFHRKGPQAQRTPAAGYGA--PMHGQYPQQPQAPLHYGAGSPRH 374
Query: 395 SLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQG--PNYANIQTTGVQRRMRHIMQGKEVG 452
+ + G G ++G QG P Q + M VG
Sbjct: 375 AYTGAGPHQPQQYGAPHVAQPSHAGQPAQPMQGMMPGQPMTQQIFIPNDM--------VG 426
Query: 453 SIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE-EFH 509
+IIGK G + ++R+ SGS I I++ ++ ER+VT+ G+ + A ++ +E E H
Sbjct: 427 AIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTQECNQMALYMLYSRLESEKH 486
Query: 510 K 510
+
Sbjct: 487 R 487
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 691 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 750
NN D S T Q + + + +P+ LIG++IGK G +I EI++ SGA R++ S
Sbjct: 200 NNEDLNSPSTPQSKTYPLR-LLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDSCLP 256
Query: 751 DSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S +R++ + G DA+ +A Y + + VE L G
Sbjct: 257 LSTERSLVVLGVADAVHIATYYVGSTLVEQLTERFGG 293
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
G ES + +R I+ +++ ++IGKGG + IR SGA V SD + ER + +
Sbjct: 124 GHQDESNWLHVRAIISSAEAATVIGKGGENVTQIRRMSGAKCTV-SDYSRGAVERILTVS 182
Query: 132 GVPDAVTQAIYQICLIM----VDSP--PKGATIPYR 161
G+ DAV +A I + ++SP P+ T P R
Sbjct: 183 GLVDAVAKAFGLIIRTLNNEDLNSPSTPQSKTYPLR 218
>gi|156051102|ref|XP_001591512.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980]
gi|154704736|gb|EDO04475.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 371
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 183/359 (50%), Gaps = 55/359 (15%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T+
Sbjct: 45 YAESQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI 99
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKG 543
G DS+ RA+S++ K + E +GG NG + +L++ +Q G+IIG+
Sbjct: 100 SGGCDSISRAYSIVAKALLEGAPQMG--MGGVVSNNGTHPI---KLLISHNQMGTIIGRQ 154
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-T 602
G +IK I++ SG + +MLP STER V ++G P+ + +A+++IC +VD +G T
Sbjct: 155 GLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGNPEGIQKAVWEICKCLVDDWARGTGT 214
Query: 603 IPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG---L 659
+ Y P+ + G G GG S G +GG
Sbjct: 215 VLYNPVVRTQTG-------------------------------GSGGMSQGNLGGTGREY 243
Query: 660 NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 719
++ + + + PR+ N+ + + R P+ N ++ Q T+ +++P++++G
Sbjct: 244 GSSRVMRTGNGADFSEGAPRSYNRRSDS-DAAQRGPPTHDENGEELQ-TQNISIPSDMVG 301
Query: 720 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
+IG+ G+KI EIRK SGA I I+KS +E + +R T+ GT A A YL+ ++E
Sbjct: 302 CIIGRAGSKISEIRKTSGARISIAKSPHDE--TGERMFTIMGTAKANDSALYLLYENLE 358
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 175/340 (51%), Gaps = 50/340 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G DS+ RA+S++ K +
Sbjct: 59 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTISGGCDSISRAYSIVAKALL 118
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + +L++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 119 EGAPQMG--MGGVVSNNGTHPI---KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQK 173
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + G
Sbjct: 174 EMLPQSTERIVEVQGNPEGIQKAVWEICKCLVDDWARGTGTVLYNPVVRTQTG------- 226
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG---LNAAALAALASSQLKTNHMP 233
G GG S G +GG ++ + + + P
Sbjct: 227 ------------------------GSGGMSQGNLGGTGREYGSSRVMRTGNGADFSEGAP 262
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
R+ N+ + + R P+ N ++ Q T+ +++P++++G +IG+ G+KI EIRK SGA
Sbjct: 263 RSYNRRSDS-DAAQRGPPTHDENGEELQ-TQNISIPSDMVGCIIGRAGSKISEIRKTSGA 320
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I I+KS +E + +R T+ GT A A YL+ ++E
Sbjct: 321 RISIAKSPHDE--TGERMFTIMGTAKANDSALYLLYENLE 358
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 54/258 (20%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ + + +G +IG+ G KI I+ +SG +R+ E S +R + + G P+ I A
Sbjct: 139 KLLISHNQMGTIIGRQGLKIKHIQDVSG--VRMVAQKEMLPQSTERIVEVQGNPEGIQKA 196
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
+ I + +DD+ A G NP+ +
Sbjct: 197 VWEICKCL----------------VDDW---------ARGTGTVLYNPV---------VR 222
Query: 385 TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFG-GVPQGPNYANIQTTGVQRRMR 443
T+ G + S LGG G S +GN F G P+ N + +
Sbjct: 223 TQTGGSGGM-SQGNLGGTGREYGS-SRVMRTGNGADFSEGAPRSYNRRSDSDAAQRGPPT 280
Query: 444 HIMQGKE------------VGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVI 488
H G+E VG IIG++G + ++R+ SG++I I+ S T ER+ T++
Sbjct: 281 HDENGEELQTQNISIPSDMVGCIIGRAGSKISEIRKTSGARISIAKSPHDETGERMFTIM 340
Query: 489 GSMDSLFRAFSLITKNIE 506
G+ + A L+ +N+E
Sbjct: 341 GTAKANDSALYLLYENLE 358
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ESQL LR IV + + G IIGKGG + +R+ +G V S ++ +R + I G D
Sbjct: 47 ESQLT-LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGV-SKVVQGVHDRVLTISGGCD 104
Query: 136 AVTQAIYQICLIMVDSPPK 154
++++A + +++ P+
Sbjct: 105 SISRAYSIVAKALLEGAPQ 123
>gi|296420990|ref|XP_002840050.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636260|emb|CAZ84241.1| unnamed protein product [Tuber melanosporum]
Length = 386
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 187/345 (54%), Gaps = 29/345 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LREE+G K +S T P+R++TV G +D + +A++
Sbjct: 54 LRAIVSSKEAGVIIGKAGKNVADLREETGVKAGVSKVVTGIPDRVLTVTGPLDGVAKAYA 113
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
++++ + + + +GG LRL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 114 MVSQTLLDSPPST---IGGGPPPGPGTLRLLISHNQMGTIIGRQGLKIKHIQDVSGTRMT 170
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLI 618
A +MLP STER V++ G P+A+ AI++I +VD +G T+ Y P ++ GG +
Sbjct: 171 AAKEMLPQSTERVVDVAGDPEAIRTAIWEIGKCLVDDWQRGTGTVLYNPAVRSPGGSSSV 230
Query: 619 GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP 678
G GM S + GN A G G + + +S + + P
Sbjct: 231 GMGNGMGGSDRYGGERGNT--RSYARTGNGAD--------------FSDSSPPYRRHDGP 274
Query: 679 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 738
+ +++ + N + P + ++ Q T+ +++P +++G +IG+GGTKI +IR+ SGA
Sbjct: 275 SGRPSDRSPSSSNTQ--PMHTDDGEEIQ-TQNISIPADMVGCIIGRGGTKIQDIRRSSGA 331
Query: 739 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
I I+K+ D+ +R T+ G+ + A YL+ N+ E LR
Sbjct: 332 RISIAKTP--HGDTGERMFTIMGSASSNEKALYLLYENLEAEKLR 374
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 183/338 (54%), Gaps = 29/338 (8%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LREE+G K +S T P+R++TV G +D + +A++++++ +
Sbjct: 61 KEAGVIIGKAGKNVADLREETGVKAGVSKVVTGIPDRVLTVTGPLDGVAKAYAMVSQTLL 120
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ + +GG LRL++ +Q G+IIG+ G +IK I++ SG + A +MLP
Sbjct: 121 DSPPST---IGGGPPPGPGTLRLLISHNQMGTIIGRQGLKIKHIQDVSGTRMTAAKEMLP 177
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGMQ 180
STER V++ G P+A+ AI++I +VD +G T+ Y P ++ GG +G GM
Sbjct: 178 QSTERVVDVAGDPEAIRTAIWEIGKCLVDDWQRGTGTVLYNPAVRSPGGSSSVGMGNGMG 237
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
S + GN A G G + + +S + + P + ++
Sbjct: 238 GSDRYGGERGNT--RSYARTGNGAD--------------FSDSSPPYRRHDGPSGRPSDR 281
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ + N + P + ++ Q T+ +++P +++G +IG+GGTKI +IR+ SGA I I+K+
Sbjct: 282 SPSSSNTQ--PMHTDDGEEIQ-TQNISIPADMVGCIIGRGGTKIQDIRRSSGARISIAKT 338
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
D+ +R T+ G+ + A YL+ N+ E LR
Sbjct: 339 P--HGDTGERMFTIMGSASSNEKALYLLYENLEAEKLR 374
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 47 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ----LRLIVPASQCGSIIGKGGSQI 102
+SLF S N+ + H + + H G E + Q LR IV + + G IIGK G +
Sbjct: 17 ESLFDN-SFQNLNVNDDHHDGD-HEGARTEEEYAQSPLTLRAIVSSKEAGVIIGKAGKNV 74
Query: 103 KTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
+RE +G V S ++ +R + + G D V +A + ++DSPP
Sbjct: 75 ADLREETGVKAGV-SKVVTGIPDRVLTVTGPLDGVAKAYAMVSQTLLDSPP 124
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ----LRLIVPASQCGSIIGKGGSQI 547
+SLF S N+ + H + + H G E + Q LR IV + + G IIGK G +
Sbjct: 17 ESLFDN-SFQNLNVNDDHHDGD-HEGARTEEEYAQSPLTLRAIVSSKEAGVIIGKAGKNV 74
Query: 548 KTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
+RE +G V S ++ +R + + G D V +A + ++DSPP
Sbjct: 75 ADLREETGVKAGV-SKVVTGIPDRVLTVTGPLDGVAKAYAMVSQTLLDSPP 124
>gi|126343878|ref|XP_001381277.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Monodelphis
domestica]
Length = 214
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 124/225 (55%), Gaps = 27/225 (12%)
Query: 108 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
++GA V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A
Sbjct: 1 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--A 58
Query: 168 GGPGLI--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 224
P + G + +Q + PD L L L + +G
Sbjct: 59 STPVIFAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ------------ 102
Query: 225 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 284
T P + + N G S + T E+T+PN+LIG +IG+ GTKI
Sbjct: 103 ---TTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKI 159
Query: 285 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 160 NEIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 201
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 124/225 (55%), Gaps = 27/225 (12%)
Query: 553 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 612
++GA V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A
Sbjct: 1 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--A 58
Query: 613 GGPGLI--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
P + G + +Q + PD L L L + +G
Sbjct: 59 STPVIFAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLGQ------------ 102
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
T P + + N G S + T E+T+PN+LIG +IG+ GTKI
Sbjct: 103 ---TTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKI 159
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
EIR++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 160 NEIRQMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 201
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I G P ++ A Y
Sbjct: 140 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISLAQY 198
Query: 143 QI 144
I
Sbjct: 199 LI 200
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I G P ++ A Y
Sbjct: 140 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISLAQY 198
Query: 588 QI 589
I
Sbjct: 199 LI 200
>gi|119193374|ref|XP_001247293.1| hypothetical protein CIMG_01064 [Coccidioides immitis RS]
gi|303312121|ref|XP_003066072.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105734|gb|EER23927.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320040053|gb|EFW21987.1| KH domain RNA binding protein [Coccidioides posadasii str.
Silveira]
gi|392863461|gb|EAS35786.2| KH domain RNA binding protein [Coccidioides immitis RS]
Length = 489
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 183/372 (49%), Gaps = 56/372 (15%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E + IGK GE V ++R SG+K +SD + ERI+TV G D++ +AF
Sbjct: 134 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTVSGPQDAVAKAF 193
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 194 GLIIRTL----NNEPLDSPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEHSGARL 249
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + +V+ P A
Sbjct: 250 NASDSCLPLSTERSLVILGVADAVHIATYYVAATLVEQLTERFGGPAASAYATRSGGPAG 309
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLA---GLAALGLGGNS 651
+PY +PQ AGG Q+G +S N ++ G+ + G S
Sbjct: 310 VVPGGMQVVPY--VPQPAGG------QYGHPDSFKRHHPQANRAMSTGYGVPYMHGPGPS 361
Query: 652 GGGMGGGLNAAALAALASSQLKTN---HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ--NQ 706
GM ++ A + Q T H P Q H+ P+Q
Sbjct: 362 PHGMQQPIHYNA----SPRQGYTGAGPHQPAPYGAPQPPHSHGT---PAQPMGAPVAGGP 414
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGT +
Sbjct: 415 LTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTQECN 471
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 472 QMALYMLYSRLE 483
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 179/363 (49%), Gaps = 56/363 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R SG+K +SD + ERI+TV G D++ +AF LI + +
Sbjct: 143 EAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTVSGPQDAVAKAFGLIIRTL-- 200
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 201 --NNEPLDSPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEHSGARLNASDSCLPL 258
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
STER + I GV DAV A Y + +V+ P A +
Sbjct: 259 STERSLVILGVADAVHIATYYVAATLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVV 318
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLA---GLAALGLGGNSGGGMGGGLN 215
PY +PQ AGG Q+G +S N ++ G+ + G S GM ++
Sbjct: 319 PY--VPQPAGG------QYGHPDSFKRHHPQANRAMSTGYGVPYMHGPGPSPHGMQQPIH 370
Query: 216 AAALAALASSQLKTN---HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ--NQITKEMTVPN 270
A + Q T H P Q H+ P+Q +T+++ +PN
Sbjct: 371 YNA----SPRQGYTGAGPHQPAPYGAPQPPHSHGT---PAQPMGAPVAGGPLTQQIFIPN 423
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGT + +A Y++
Sbjct: 424 DMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTQECNQMALYMLYS 480
Query: 331 SVE 333
+E
Sbjct: 481 RLE 483
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
G E+ I +R ++ +++ + IGKGG + IR SGA V SD + ER + +
Sbjct: 125 GTQDETGFIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYTRGAVERILTVS 183
Query: 132 GVPDAVTQAIYQICLIMVDSP 152
G DAV +A I + + P
Sbjct: 184 GPQDAVAKAFGLIIRTLNNEP 204
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
G E+ I +R ++ +++ + IGKGG + IR SGA V SD + ER + +
Sbjct: 125 GTQDETGFIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYTRGAVERILTVS 183
Query: 577 GVPDAVTQAIYQICLIMVDSP 597
G DAV +A I + + P
Sbjct: 184 GPQDAVAKAFGLIIRTLNNEP 204
>gi|47220208|emb|CAF98973.1| unnamed protein product [Tetraodon nigroviridis]
Length = 345
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 107/176 (60%), Gaps = 26/176 (14%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 14 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKA 73
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE
Sbjct: 74 FAMIAYKFEEDIINSMSNSLATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMREAELLC 132
Query: 558 VY---VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD-SPPKGATIPYRPLP 609
V ++SD+ + +C+ V SPPKGATIPYRP P
Sbjct: 133 VIKEGISSDIF---------------------FCMCVKSVTASPPKGATIPYRPKP 167
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 26/168 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 22 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFAMIAYKF 81
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY---VAS 117
EE N + + + LRL+VPASQCGS+IGKGGS+IK +RE V ++S
Sbjct: 82 EEDIINSMSNSLATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEMREAELLCVIKEGISS 140
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD-SPPKGATIPYRPLP 164
D+ + +C+ V SPPKGATIPYRP P
Sbjct: 141 DIF---------------------FCMCVKSVTASPPKGATIPYRPKP 167
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ + E S++R IT+TGTP I+
Sbjct: 270 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM---EGSSERQITITGTPANIS 326
Query: 323 LAQYLIN 329
LAQYLIN
Sbjct: 327 LAQYLIN 333
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ + E S++R IT+TGTP I+
Sbjct: 270 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM---EGSSERQITITGTPANIS 326
Query: 768 LAQYLIN 774
LAQYLIN
Sbjct: 327 LAQYLIN 333
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 84 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQ 143
L +P G IIG+ G++I IR+ SGA + +A+ M S+ER++ I G P ++ A Y
Sbjct: 273 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM-EGSSERQITITGTPANISLAQYL 331
Query: 144 I 144
I
Sbjct: 332 I 332
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 529 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQ 588
L +P G IIG+ G++I IR+ SGA + +A+ M S+ER++ I G P ++ A Y
Sbjct: 273 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM-EGSSERQITITGTPANISLAQYL 331
Query: 589 I 589
I
Sbjct: 332 I 332
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER V I G D + +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDTIFK 72
Query: 140 AIYQI 144
A I
Sbjct: 73 AFAMI 77
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 182/380 (47%), Gaps = 74/380 (19%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF
Sbjct: 120 HIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVSDYQKGAVERILTVSGVVDAAAKAF 179
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + +Q +S+ LRL+VP GSIIGKGG +I+ I+E SGA +
Sbjct: 180 GLIIRTLNGEPLDQPS----TPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQSGARL 235
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------P-----------PKG 600
+ LP STER V + GV DAV A Y + +++ P P G
Sbjct: 236 NASDACLPLSTERSVVVLGVADAVHIATYYVASTLLEQLTERFGGPTASAYATRSGGPAG 295
Query: 601 A------TIPYRPLPQ--NAGGPGLIGN-----------QFGMQNSLMGAPDMGNNPLAG 641
+PY P P N G P + + Q+G + G P G
Sbjct: 296 VIPGGMQVVPYVPQPAGGNYGHPDNVRHNDIRSRQTPAAQYGQPYA------QGPGPQQG 349
Query: 642 LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTN 701
A++ GG+ G GG + Q Q + GP +
Sbjct: 350 GASMHYGGSPAAGYGG-------------------VAPQQPQQVGHGGPASHAGPPAQPM 390
Query: 702 Q---QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 758
Q +T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T
Sbjct: 391 QGVVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVT 447
Query: 759 MTGTPDAIALAQYLINMSVE 778
+TGT + +A Y++ +E
Sbjct: 448 ITGTAECNQMALYMLYSRLE 467
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 178/371 (47%), Gaps = 74/371 (19%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF LI + +
Sbjct: 129 EAATVIGKGGENVTLIRKMSGAKCTVSDYQKGAVERILTVSGVVDAAAKAFGLIIRTLNG 188
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+Q +S+ LRL+VP GSIIGKGG +I+ I+E SGA + + LP
Sbjct: 189 EPLDQPS----TPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQSGARLNASDACLPL 244
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------P-----------PKGA------TI 158
STER V + GV DAV A Y + +++ P P G +
Sbjct: 245 STERSVVVLGVADAVHIATYYVASTLLEQLTERFGGPTASAYATRSGGPAGVIPGGMQVV 304
Query: 159 PYRPLPQ--NAGGPGLIGN-----------QFGMQNSLMGAPDMGNNPLAGLAALGLGGN 205
PY P P N G P + + Q+G + G P G A++ GG+
Sbjct: 305 PYVPQPAGGNYGHPDNVRHNDIRSRQTPAAQYGQPYA------QGPGPQQGGASMHYGGS 358
Query: 206 SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQ---QQNQI 262
G GG + Q Q + GP + Q +
Sbjct: 359 PAAGYGG-------------------VAPQQPQQVGHGGPASHAGPPAQPMQGVVPGQPL 399
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 400 TQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTAECNQ 456
Query: 323 LAQYLINMSVE 333
+A Y++ +E
Sbjct: 457 MALYMLYSRLE 467
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ +++ ++IGKGG + IR+ SGA V SD + ER + + GV
Sbjct: 113 HDESSWIHIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTV-SDYQKGAVERILTVSGV 171
Query: 134 PDAVTQAIYQICLIM----VDSP--PKGATIPYRPL 163
DA +A I + +D P P+ T P R L
Sbjct: 172 VDAAAKAFGLIIRTLNGEPLDQPSTPQSRTYPLRLL 207
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ ES I +R ++ +++ ++IGKGG + IR+ SGA V SD + ER + + GV
Sbjct: 113 HDESSWIHIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTV-SDYQKGAVERILTVSGV 171
Query: 579 PDAVTQAIYQICLIM----VDSP--PKGATIPYRPL 608
DA +A I + +D P P+ T P R L
Sbjct: 172 VDAAAKAFGLIIRTLNGEPLDQPSTPQSRTYPLRLL 207
>gi|361123942|gb|EHK96076.1| putative RNA-binding protein rnc1 [Glarea lozoyensis 74030]
Length = 376
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 187/359 (52%), Gaps = 44/359 (12%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T+
Sbjct: 47 YAESQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGCKAGVSKVVQGVHDRVLTI 101
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGSQ 546
G +++ +A++++ K + E +GG +S ++L++ +Q G+IIG+ G +
Sbjct: 102 AGGCEAISKAYAIVAKALLEGAPQMG--MGGVVAQSGSHPIKLLISHNQMGTIIGRQGLK 159
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPY 605
IK I++ SG + +MLP STER V ++G P+ + +A+++IC +VD +G T+ Y
Sbjct: 160 IKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQKAVWEICKCLVDDWQRGTGTVLY 219
Query: 606 RPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
P+ + PG G G Q D GNN + M G N A
Sbjct: 220 NPVVRTQ--PGAAGGMGGGQALGGSPRGDYGNNRV---------------MRTG-NGADF 261
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
+N PR+ N ++ + R P+ N ++ Q T+ +++P++++G +IG+
Sbjct: 262 ---------SNEAPRSYNNRRSDSDAAQRGPPTHDENGEELQ-TQNISIPSDMVGCIIGR 311
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
G+KI EIRK SGA I I+KS +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 312 AGSKISEIRKTSGARISIAKSPHDE--TGERMFTIMGSQKANETALYLLYENLEAEKMR 368
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 179/340 (52%), Gaps = 39/340 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G +++ +A++++ K +
Sbjct: 61 KEAGVIIGKGGKNVADLRDETGCKAGVSKVVQGVHDRVLTIAGGCEAISKAYAIVAKALL 120
Query: 62 EFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 121 EGAPQMG--MGGVVAQSGSHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEML 178
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + PG G G
Sbjct: 179 PQSTERIVEVQGTPEGIQKAVWEICKCLVDDWQRGTGTVLYNPVVRTQ--PGAAGGMGGG 236
Query: 180 QNSLMGAP-DMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
Q D GNN + M G N A +N PR+ N
Sbjct: 237 QALGGSPRGDYGNNRV---------------MRTG-NGADF---------SNEAPRSYNN 271
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
++ + R P+ N ++ Q T+ +++P++++G +IG+ G+KI EIRK SGA I I+
Sbjct: 272 RRSDSDAAQRGPPTHDENGEELQ-TQNISIPSDMVGCIIGRAGSKISEIRKTSGARISIA 330
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
KS +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 331 KSPHDE--TGERMFTIMGSQKANETALYLLYENLEAEKMR 368
>gi|296812925|ref|XP_002846800.1| KH domain RNA binding protein [Arthroderma otae CBS 113480]
gi|238842056|gb|EEQ31718.1| KH domain RNA binding protein [Arthroderma otae CBS 113480]
Length = 477
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 174/374 (46%), Gaps = 78/374 (20%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSL 500
+R ++ E ++IGK GE V ++R SG+K +SD S G+++ + AF L
Sbjct: 132 HIRAVISSAEAATVIGKGGENVSQIRRLSGAKCTVSDYSR--------GAVERILTAFGL 183
Query: 501 ITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
I + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 184 IIRTL----NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNA 239
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA------------ 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 240 SDSCLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVV 299
Query: 602 -----TIPYRPLPQNAGGPGLIGNQFGMQNSL--------------MGAPDM---GNNPL 639
+PY +PQ AGG Q+G +SL G P M G +P
Sbjct: 300 PGGMQVVPY--VPQPAGG------QYGHPDSLRRNNPQANRATPGGYGVPYMQQPGPHPH 351
Query: 640 AGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK 699
A +L G + G G A H+P N GP
Sbjct: 352 APQPSLHYGASPRQGYTGAGPHQPAPYGAPQPPHGGHVPPN--------------GPPMG 397
Query: 700 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 759
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+
Sbjct: 398 AAVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTI 454
Query: 760 TGTPDAIALAQYLI 773
TGT + +A Y++
Sbjct: 455 TGTQECNQMALYML 468
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 170/365 (46%), Gaps = 78/365 (21%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
E ++IGK GE V ++R SG+K +SD S G+++ + AF LI + +
Sbjct: 141 EAATVIGKGGENVSQIRRLSGAKCTVSDYSR--------GAVERILTAFGLIIRTL---- 188
Query: 65 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 124
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP ST
Sbjct: 189 NNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPLST 248
Query: 125 EREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TIPY 160
ER + I GV DAV A Y + + +V+ P A +PY
Sbjct: 249 ERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPY 308
Query: 161 RPLPQNAGGPGLIGNQFGMQNSL--------------MGAPDM---GNNPLAGLAALGLG 203
+PQ AGG Q+G +SL G P M G +P A +L G
Sbjct: 309 --VPQPAGG------QYGHPDSLRRNNPQANRATPGGYGVPYMQQPGPHPHAPQPSLHYG 360
Query: 204 GNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQIT 263
+ G G A H+P N GP +T
Sbjct: 361 ASPRQGYTGAGPHQPAPYGAPQPPHGGHVPPN--------------GPPMGAAVPGQPLT 406
Query: 264 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIAL 323
+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGT + +
Sbjct: 407 QQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTQECNQM 463
Query: 324 AQYLI 328
A Y++
Sbjct: 464 ALYML 468
>gi|258574629|ref|XP_002541496.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901762|gb|EEP76163.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 491
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 182/375 (48%), Gaps = 71/375 (18%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E + IGK GE V ++R SG+K +SD + ERI+TV G D++ +AF
Sbjct: 133 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTVSGPQDAVAKAF 192
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 193 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEHSGARL 248
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------P-----------PKG 600
+ LP STER + I GV DAV A Y + +V+ P P G
Sbjct: 249 NASDSCLPLSTERSLVILGVADAVHIATYYVAATLVEQLTERFGGPAASAYATRSGGPAG 308
Query: 601 A------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G +S ++P A A ++G G
Sbjct: 309 VIPGGMQVVPY--VPQPAGG------QYGHPDSF-----KRHHPQANRAM-----STGYG 350
Query: 655 M-----GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP----SQKTNQQQ- 704
M G G + A+ + N PR H P S T Q
Sbjct: 351 MPYMQGGPGPSPHAM----QQPIHYNASPRQGYTGAGPHQPAPYGAPQPPHSHGTPAQPM 406
Query: 705 ------NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 758
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T
Sbjct: 407 GAPVAGGPLTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVT 463
Query: 759 MTGTPDAIALAQYLI 773
+TGT + +A Y++
Sbjct: 464 ITGTQECNQMALYML 478
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 178/366 (48%), Gaps = 71/366 (19%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R SG+K +SD + ERI+TV G D++ +AF LI + +
Sbjct: 142 EAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTVSGPQDAVAKAFGLIIRTL-- 199
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 200 --NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEHSGARLNASDSCLPL 257
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------P-----------PKGA------TI 158
STER + I GV DAV A Y + +V+ P P G +
Sbjct: 258 STERSLVILGVADAVHIATYYVAATLVEQLTERFGGPAASAYATRSGGPAGVIPGGMQVV 317
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM-----GGG 213
PY +PQ AGG Q+G +S ++P A A ++G GM G G
Sbjct: 318 PY--VPQPAGG------QYGHPDSF-----KRHHPQANRAM-----STGYGMPYMQGGPG 359
Query: 214 LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP----SQKTNQQQ-------NQI 262
+ A+ + N PR H P S T Q +
Sbjct: 360 PSPHAM----QQPIHYNASPRQGYTGAGPHQPAPYGAPQPPHSHGTPAQPMGAPVAGGPL 415
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGT +
Sbjct: 416 TQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTQECNQ 472
Query: 323 LAQYLI 328
+A Y++
Sbjct: 473 MALYML 478
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N D PS Q + +P+ LIG++IGK G +I EI++ SGA R++ S
Sbjct: 200 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEHSGA--RLNASDSC 254
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
S +R++ + G DA+ +A Y + + VE L G
Sbjct: 255 LPLSTERSLVILGVADAVHIATYYVAATLVEQLTERFGG 293
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N D PS Q + +P+ LIG++IGK G +I EI++ SGA R++ S
Sbjct: 200 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEHSGA--RLNASDSC 254
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S +R++ + G DA+ +A Y + + VE L G
Sbjct: 255 LPLSTERSLVILGVADAVHIATYYVAATLVEQLTERFGG 293
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
G E+ I +R ++ +++ + IGKGG + IR SGA V SD + ER + +
Sbjct: 124 GTQDETGFIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYTRGAVERILTVS 182
Query: 132 GVPDAVTQAIYQICLIMVDSP 152
G DAV +A I + + P
Sbjct: 183 GPQDAVAKAFGLIIRTLNNEP 203
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
G E+ I +R ++ +++ + IGKGG + IR SGA V SD + ER + +
Sbjct: 124 GTQDETGFIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYTRGAVERILTVS 182
Query: 577 GVPDAVTQAIYQICLIMVDSP 597
G DAV +A I + + P
Sbjct: 183 GPQDAVAKAFGLIIRTLNNEP 203
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 184/361 (50%), Gaps = 45/361 (12%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 41 EYAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLT 95
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
+ G D++ RA++++ + + E +GG +S ++L++ +Q G+IIG+ G
Sbjct: 96 ITGGCDAISRAYAIVARALLEGAPAMG--MGGVVQSNGTHPIKLLISHNQMGTIIGRQGL 153
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + +MLP STER V ++G P+ + +AI++IC +VD +G T+
Sbjct: 154 KIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTVL 213
Query: 605 YRPLPQNAGGPGLIGNQFGMQ--NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 662
Y P+ + G GN G N G D G +P + G G + G
Sbjct: 214 YNPVVRTQPSSG--GNTSGGAGFNQGSGRSDYGGSPR--VMRTGNGADFSNG-------- 261
Query: 663 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 722
+ P N+ + + R P+ N ++ Q T+ +++P +++G +I
Sbjct: 262 ------------SSRPYNRRSDSDAALRGP---PTHDENGEEIQ-TQNISIPADMVGCII 305
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELL 780
G+ G+KI EIRK SGA I I+K+ +E + +R T+ GT A A +L+ N+ E +
Sbjct: 306 GRAGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKM 363
Query: 781 R 781
R
Sbjct: 364 R 364
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 176/341 (51%), Gaps = 40/341 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRAYAIVARALL 115
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 116 EGAPAMG--MGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEML 173
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P+ + +AI++IC +VD +G T+ Y P+ + G GN G
Sbjct: 174 PQSTERIVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTVLYNPVVRTQPSSG--GNTSGG 231
Query: 180 Q--NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
N G D G +P + G G + G + P N+
Sbjct: 232 AGFNQGSGRSDYGGSPR--VMRTGNGADFSNG--------------------SSRPYNRR 269
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ + R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I I
Sbjct: 270 SDSDAALRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 325
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 326 AKAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 364
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 139/330 (42%), Gaps = 78/330 (23%)
Query: 251 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
P+ KT ++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 34 PAPKTEEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 90
Query: 309 DRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG-----GESNMDDFSSDNNLPSSAP 363
DR +T+TG DAI+ A Y I L A G GG G + S N + +
Sbjct: 91 DRVLTITGGCDAISRA-YAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIG 149
Query: 364 LAGLNASNPLAAA----------LPQLAQIL-----TKPGALNALTSLSAL------GGL 402
GL + A+ LPQ + + T G A+ + G
Sbjct: 150 RQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAIWEICKCLVDDWQRGT 209
Query: 403 SDLL-----------GGGSSGGGSGNSGG----FGGVPQ------GPNYANIQTTGVQRR 441
+L GG +SGG N G +GG P+ G +++N + RR
Sbjct: 210 GTVLYNPVVRTQPSSGGNTSGGAGFNQGSGRSDYGGSPRVMRTGNGADFSNGSSRPYNRR 269
Query: 442 ------MR----HIMQGKE------------VGSIIGKSGETVKKLREESGSKIYISDS- 478
+R H G+E VG IIG++G + ++R+ SG++I I+ +
Sbjct: 270 SDSDAALRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAP 329
Query: 479 --STPERIVTVIGSMDSLFRAFSLITKNIE 506
T ER+ T++G+ + A L+ +N+E
Sbjct: 330 HDETGERMFTIMGTAKANESALFLLYENLE 359
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 696 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
P+ KT ++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 34 PAPKTEEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 90
Query: 754 DRTITMTGTPDAIALAQYLI 773
DR +T+TG DAI+ A ++
Sbjct: 91 DRVLTITGGCDAISRAYAIV 110
>gi|154275678|ref|XP_001538690.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415130|gb|EDN10492.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225556762|gb|EEH05050.1| KH domain RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 363
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 185/369 (50%), Gaps = 49/369 (13%)
Query: 423 GVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SST 480
G P+GP + + +R I+ KE G IIGK+G+ V LR+E+G K +S
Sbjct: 27 GEPEGPPKTDEEYAQSTLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGV 86
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSI 539
+R++TV G + +A++++ K + E +GG + +RL++ +Q G+I
Sbjct: 87 HDRVLTVTGPLQGTAKAYAIVAKGLLEGAPQLG--MGGVASNNGTHPVRLLISHNQMGTI 144
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
IG+ G +IK I++ SG + +MLP STER V ++G P+ + +A+++I ++D +
Sbjct: 145 IGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 204
Query: 600 GA-TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 658
G T+ Y P + + G G + N G +G + G GG S G G
Sbjct: 205 GTGTVLYNPAVRASVGGGPLNNSLG----------------SGASTGGYGGRSYNRTGNG 248
Query: 659 LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVP 714
+ + +Q + R+N D S+ T + T+ +++P
Sbjct: 249 ADFS-------------------DQTGGYNRRSNSDAASRGIPLVTEDGEEVQTQNISIP 289
Query: 715 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI- 773
++++G +IG+GG+KI EIR+ SGA I I+K+ +E + +R T+ G+ A A YL+
Sbjct: 290 SDMVGCIIGRGGSKISEIRRSSGARISIAKAPHDE--TGERMFTIMGSAAANEKALYLLY 347
Query: 774 -NMSVELLR 781
N+ E +R
Sbjct: 348 ENLEAEKMR 356
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 174/343 (50%), Gaps = 49/343 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A++++ K +
Sbjct: 53 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYAIVAKGLL 112
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG + +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 113 EGAPQLG--MGGVASNNGTHPVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P+ + +A+++I ++D +G T+ Y P + + G G + N G
Sbjct: 171 PQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRASVGGGPLNNSLG- 229
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+G + G GG S G G + + +Q
Sbjct: 230 ---------------SGASTGGYGGRSYNRTGNGADFS-------------------DQT 255
Query: 240 QNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+ R+N D S+ T + T+ +++P++++G +IG+GG+KI EIR+ SGA I
Sbjct: 256 GGYNRRSNSDAASRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARI 315
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K+ +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 316 SIAKAPHDE--TGERMFTIMGSAAANEKALYLLYENLEAEKMR 356
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 180/361 (49%), Gaps = 52/361 (14%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V LRE++G + +S +R++T
Sbjct: 36 EYAQAQLT-----LRAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSKVVPGVHDRVLT 90
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGS 545
V G++ + A+ L+ ++ + +GG G +RL++ +Q G+IIG+ G
Sbjct: 91 VTGALTGIADAYGLVADSLVKGAPQMG--MGGVVGNPNTHPIRLLISHNQMGTIIGRQGL 148
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIP 604
+IK I++ SG + +MLP STER V ++G PD + +A+++I +VD +G T+
Sbjct: 149 KIKQIQDASGVRMVAQKEMLPQSTERIVEVQGTPDGIQKAVWEIGKCLVDDEQRGYGTVL 208
Query: 605 YRPLPQ-NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
Y P + GGP L G GAP +G +G G N
Sbjct: 209 YSPAVRVQGGGPPLNGT---------GAP--------------VGPGAGYGAPRSYNRTG 245
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQI-TKEMTVPNELIGAVI 722
A + + PR Q +GP TN+ I T+ +++P +++G +I
Sbjct: 246 NGADFTGAAPAPYSPRRQ------------EGPLPTTNEDGEDIQTQNISIPADMVGCII 293
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELL 780
G+GG+KI EIRK SGA I I+K+ +E + +R T+TG A A YL+ N+ E +
Sbjct: 294 GRGGSKISEIRKSSGARISIAKAPHDE--TGERMFTITGGSAANEKALYLLYENLEAEKM 351
Query: 781 R 781
R
Sbjct: 352 R 352
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 172/341 (50%), Gaps = 47/341 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LRE++G + +S +R++TV G++ + A+ L+ ++
Sbjct: 51 KEAGVIIGKAGQNVADLREKTGVRAGVSKVVPGVHDRVLTVTGALTGIADAYGLVADSLV 110
Query: 62 EFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+ +GG G +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 111 KGAPQMG--MGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEML 168
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQ-NAGGPGLIGNQFG 178
P STER V ++G PD + +A+++I +VD +G T+ Y P + GGP L G
Sbjct: 169 PQSTERIVEVQGTPDGIQKAVWEIGKCLVDDEQRGYGTVLYSPAVRVQGGGPPLNGT--- 225
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
GAP +G +G G N A + + PR Q
Sbjct: 226 ------GAP--------------VGPGAGYGAPRSYNRTGNGADFTGAAPAPYSPRRQ-- 263
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+GP TN+ I T+ +++P +++G +IG+GG+KI EIRK SGA I I
Sbjct: 264 ----------EGPLPTTNEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISI 313
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+K+ +E + +R T+TG A A YL+ N+ E +R
Sbjct: 314 AKAPHDE--TGERMFTITGGSAANEKALYLLYENLEAEKMR 352
>gi|408395856|gb|EKJ75028.1| hypothetical protein FPSE_04740 [Fusarium pseudograminearum CS3096]
Length = 372
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 181/359 (50%), Gaps = 41/359 (11%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 41 EYAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLT 95
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
+ G D++ RA++++ + + E +GG +S ++L++ +Q G+IIG+ G
Sbjct: 96 ITGGCDAISRAYAIVARALLEGAPAMG--MGGVVQSNGTHPIKLLISHNQMGTIIGRQGL 153
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + +MLP STER V ++G P+ + +AI++IC +VD +G T+
Sbjct: 154 KIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTVL 213
Query: 605 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
Y P+ + + N G D G +P + G G + G
Sbjct: 214 YNPVVRTQPSSSGSTSGGAGFNQGSGRSDYGGSPR--VMRTGNGADFSNG---------- 261
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
+ P N+ + + R P+ N ++ Q T+ +++P +++G +IG+
Sbjct: 262 ----------SSRPYNRRSDSDAALRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGR 307
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
G+KI EIRK SGA I I+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 308 AGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 364
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 173/339 (51%), Gaps = 36/339 (10%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRAYAIVARALL 115
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 116 EGAPAMG--MGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEML 173
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P+ + +AI++IC +VD +G T+ Y P+ + +
Sbjct: 174 PQSTERIVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTVLYNPVVRTQPSSSGSTSGGAG 233
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
N G D G +P + G G + G + P N+ +
Sbjct: 234 FNQGSGRSDYGGSPR--VMRTGNGADFSNG--------------------SSRPYNRRSD 271
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I I+K
Sbjct: 272 SDAALRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAK 327
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 328 APHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 364
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 251 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
P+ KT ++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 34 PAPKTEEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 90
Query: 309 DRTITMTGTPDAIALAQYLI 328
DR +T+TG DAI+ A ++
Sbjct: 91 DRVLTITGGCDAISRAYAIV 110
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 696 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
P+ KT ++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 34 PAPKTEEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 90
Query: 754 DRTITMTGTPDAIALAQYLI 773
DR +T+TG DAI+ A ++
Sbjct: 91 DRVLTITGGCDAISRAYAIV 110
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 178/355 (50%), Gaps = 47/355 (13%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V +R+ SG+K +SD ERI+TV G +D++ +AF
Sbjct: 127 HVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVSGVVDAVAKAF 186
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ + S+ LRL++P GSIIGKGG +IK I+E SGA +
Sbjct: 187 GLIIRTL----NNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARL 242
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP--- 615
+ LP STER + + GV DAV A Y + G+T+ + L + GGP
Sbjct: 243 NASDSYLPLSTERSLVVLGVADAVHIATYYV----------GSTL-FEQLTERFGGPAAS 291
Query: 616 -------GLIGNQFG-MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG-GLNAAALAA 666
G G G M N + + N+ L G + GG GG G A
Sbjct: 292 AYASRSGGPAGVVPGAMPNHTVKDRHLTNSQLPLHITGGHASPAVGGYGGVGPQQPQQAG 351
Query: 667 LASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
A Q P Q Q G +T+++ +PN+++GA+IGKGG
Sbjct: 352 HAVPQ------PHGATGPQGQPMPGAIPG---------QPLTQQIFIPNDMVGAIIGKGG 396
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLR 781
KI EIR++SG++I+I +E +++SN+R +T+TGT + +A Y++ +E R
Sbjct: 397 AKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTAECNQMALYMLYSRLESER 448
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 174/346 (50%), Gaps = 47/346 (13%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ SG+K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 136 EAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVSGVVDAVAKAFGLIIRTL-- 193
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + S+ LRL++P GSIIGKGG +IK I+E SGA + + LP
Sbjct: 194 --NNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARLNASDSYLPL 251
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP----------GL 172
STER + + GV DAV A Y + G+T+ + L + GGP G
Sbjct: 252 STERSLVVLGVADAVHIATYYV----------GSTL-FEQLTERFGGPAASAYASRSGGP 300
Query: 173 IGNQFG-MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG-GLNAAALAALASSQLKTN 230
G G M N + + N+ L G + GG GG G A A Q
Sbjct: 301 AGVVPGAMPNHTVKDRHLTNSQLPLHITGGHASPAVGGYGGVGPQQPQQAGHAVPQ---- 356
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
P Q Q G +T+++ +PN+++GA+IGKGG KI EIR++
Sbjct: 357 --PHGATGPQGQPMPGAIPG---------QPLTQQIFIPNDMVGAIIGKGGAKINEIRQL 405
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLR 336
SG++I+I +E +++SN+R +T+TGT + +A Y++ +E R
Sbjct: 406 SGSVIKI---NEPQDNSNERLVTITGTAECNQMALYMLYSRLESER 448
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 51/267 (19%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 213 LLIPHILIGSIIGKGGVRIKEIQEASGA--RLNASDSYLPLSTERSLVVLGVADAVHIAT 270
Query: 326 YLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILT 385
Y + + L L GG + ++S + P AG+
Sbjct: 271 YYVGST---LFEQLTERFGGPA-ASAYASRSGGP-----AGV------------------ 303
Query: 386 KPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGV----PQGPNYANIQTTGVQRR 441
PGA+ T S L + G S GG+GGV PQ +A Q G
Sbjct: 304 VPGAMPNHTVKDRHLTNSQLPLHITGGHASPAVGGYGGVGPQQPQQAGHAVPQPHGATGP 363
Query: 442 MRHIMQG---------------KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERI 484
M G VG+IIGK G + ++R+ SGS I I++ ++ ER+
Sbjct: 364 QGQPMPGAIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERL 423
Query: 485 VTVIGSMDSLFRAFSLITKNIE-EFHK 510
VT+ G+ + A ++ +E E H+
Sbjct: 424 VTITGTAECNQMALYMLYSRLESERHR 450
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ +++ ++IGKGG + +R+ SGA V SD + ER + + GV
Sbjct: 120 HDESGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTV-SDYQKGAVERILTVSGV 178
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 179 VDAVAKAFGLIIRTLNNEP 197
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ ES I +R ++ +++ ++IGKGG + +R+ SGA V SD + ER + + GV
Sbjct: 120 HDESGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTV-SDYQKGAVERILTVSGV 178
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 179 VDAVAKAFGLIIRTLNNEP 197
>gi|402083824|gb|EJT78842.1| hypothetical protein GGTG_03937 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 373
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 182/367 (49%), Gaps = 57/367 (15%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK G+ V LR+E+G + +S +R++T+
Sbjct: 41 YAQAQLT-----VRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVVQGVHDRVLTI 95
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQ 546
G D++ +A++++ + + E +GG +S ++L++ +Q G+IIG+ G +
Sbjct: 96 TGGCDAISKAYAIVARALLEGAPTLG--MGGVVQSNGTHPIKLLISHNQMGTIIGREGLK 153
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPY 605
IK I++ SG + DMLP S ER V ++G P+ + +A+++IC ++D + T+ Y
Sbjct: 154 IKHIQDVSGVRMVAQKDMLPQSNERVVEVQGTPEGIQRAVWEICKCLIDDWQRATGTVLY 213
Query: 606 RPL---------PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
P P GGPG NS D G++P + G G + G
Sbjct: 214 NPAVRTQPGGAPPLTTGGPGY--------NSTGARGDYGSSPR--VTRTGNGADFSNG-- 261
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
PR N+ + + NR P+ N ++ Q T+ +++P
Sbjct: 262 -------------------STPRLYNRRSDS-DAANRGPPTHDENGEEIQ-TQNISIPAN 300
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--N 774
++G +IG+ G+KI EIRK SGA I I+K+ +E + +R T+ G+ A A +L+ N
Sbjct: 301 MVGCIIGRAGSKISEIRKASGARISIAKAPHDE--TGERMFTIMGSAKANESALFLLYEN 358
Query: 775 MSVELLR 781
+ E +R
Sbjct: 359 LEAEKIR 365
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 174/348 (50%), Gaps = 52/348 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G + +S +R++T+ G D++ +A++++ + +
Sbjct: 55 KEAGVIIGKGGKNVADLRDETGVRAGVSKVVQGVHDRVLTITGGCDAISKAYAIVARALL 114
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + DML
Sbjct: 115 EGAPTLG--MGGVVQSNGTHPIKLLISHNQMGTIIGREGLKIKHIQDVSGVRMVAQKDML 172
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPL---------PQNAGGP 170
P S ER V ++G P+ + +A+++IC ++D + T+ Y P P GGP
Sbjct: 173 PQSNERVVEVQGTPEGIQRAVWEICKCLIDDWQRATGTVLYNPAVRTQPGGAPPLTTGGP 232
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
G NS D G++P + G G + G
Sbjct: 233 GY--------NSTGARGDYGSSPR--VTRTGNGADFSNG--------------------- 261
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
PR N+ + + NR P+ N ++ Q T+ +++P ++G +IG+ G+KI EIRK
Sbjct: 262 STPRLYNRRSDS-DAANRGPPTHDENGEEIQ-TQNISIPANMVGCIIGRAGSKISEIRKA 319
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
SGA I I+K+ +E + +R T+ G+ A A +L+ N+ E +R
Sbjct: 320 SGARISIAKAPHDE--TGERMFTIMGSAKANESALFLLYENLEAEKIR 365
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 111/274 (40%), Gaps = 80/274 (29%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ + + +G +IG+ G KI I+ +SG +R+ + SN+R + + GTP+ I A
Sbjct: 135 KLLISHNQMGTIIGREGLKIKHIQDVSG--VRMVAQKDMLPQSNERVVEVQGTPEGIQRA 192
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
+ I + +DD+ G NP +
Sbjct: 193 VWEICKCL----------------IDDWQR---------ATGTVLYNP---------AVR 218
Query: 385 TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQ------GPNYANIQTTGV 438
T+PG LT+ GG +G G +G P+ G +++N T +
Sbjct: 219 TQPGGAPPLTT------------GGPGYNSTGARGDYGSSPRVTRTGNGADFSNGSTPRL 266
Query: 439 QRRMR-----------HIMQGKE------------VGSIIGKSGETVKKLREESGSKIYI 475
R H G+E VG IIG++G + ++R+ SG++I I
Sbjct: 267 YNRRSDSDAANRGPPTHDENGEEIQTQNISIPANMVGCIIGRAGSKISEIRKASGARISI 326
Query: 476 SDS---STPERIVTVIGSMDSLFRAFSLITKNIE 506
+ + T ER+ T++GS + A L+ +N+E
Sbjct: 327 AKAPHDETGERMFTIMGSAKANESALFLLYENLE 360
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 250 GPSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 307
GP+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK +
Sbjct: 32 GPAPKTDEEYAQAQLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVV---QGV 88
Query: 308 NDRTITMTGTPDAIALAQYLI 328
+DR +T+TG DAI+ A ++
Sbjct: 89 HDRVLTITGGCDAISKAYAIV 109
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 695 GPSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 752
GP+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK +
Sbjct: 32 GPAPKTDEEYAQAQLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVV---QGV 88
Query: 753 NDRTITMTGTPDAIALAQYLI 773
+DR +T+TG DAI+ A ++
Sbjct: 89 HDRVLTITGGCDAISKAYAIV 109
>gi|342880804|gb|EGU81822.1| hypothetical protein FOXB_07617 [Fusarium oxysporum Fo5176]
Length = 372
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 181/359 (50%), Gaps = 41/359 (11%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 41 EYAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLT 95
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
+ G D++ RA++++ + + E +GG +S ++L++ +Q G+IIG+ G
Sbjct: 96 ITGGCDAISRAYAIVARALLEGAPAMG--MGGVVQSNGTHPIKLLISHNQMGTIIGRQGL 153
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + +MLP STER V ++G P+ + +AI++IC +VD +G T+
Sbjct: 154 KIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTVL 213
Query: 605 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
Y P+ + + + G D G +P + G G + G
Sbjct: 214 YNPVVRTQPSGSGNASGGAGFSQGSGRSDYGGSPR--VMRTGNGADFSNG---------- 261
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
N P N+ + + R P+ N ++ Q T+ +++P +++G +IG+
Sbjct: 262 ----------NSRPYNRRSDSDAALRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGR 307
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
G+KI EIRK SGA I I+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 308 AGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 364
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 173/339 (51%), Gaps = 36/339 (10%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRAYAIVARALL 115
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 116 EGAPAMG--MGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEML 173
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P+ + +AI++IC +VD +G T+ Y P+ + +
Sbjct: 174 PQSTERIVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTVLYNPVVRTQPSGSGNASGGAG 233
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ G D G +P + G G + G N P N+ +
Sbjct: 234 FSQGSGRSDYGGSPR--VMRTGNGADFSNG--------------------NSRPYNRRSD 271
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I I+K
Sbjct: 272 SDAALRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAK 327
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 328 APHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 364
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 251 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 34 PAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 90
Query: 309 DRTITMTGTPDAIALAQYLI 328
DR +T+TG DAI+ A ++
Sbjct: 91 DRVLTITGGCDAISRAYAIV 110
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 696 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 34 PAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 90
Query: 754 DRTITMTGTPDAIALAQYLI 773
DR +T+TG DAI+ A ++
Sbjct: 91 DRVLTITGGCDAISRAYAIV 110
>gi|389630232|ref|XP_003712769.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|351645101|gb|EHA52962.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|440469705|gb|ELQ38806.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482607|gb|ELQ63080.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 370
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 184/363 (50%), Gaps = 52/363 (14%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T+
Sbjct: 41 YAQAQLT-----VRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI 95
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKG 543
G + + +A++++ + + E + +GG NG + +L++ +Q G+IIG+
Sbjct: 96 TGGCEGISKAYAVVARALLEGAPSMG--MGGVVSNNGTHPI---KLLISHNQMGTIIGRQ 150
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-T 602
G +IK I++ SG + +MLP STER V ++G P+ + +A+++IC ++D +G T
Sbjct: 151 GLKIKHIQDVSGVRMVAQKEMLPQSTERVVEVQGTPEGIQRAVWEICKCLIDDWQRGTGT 210
Query: 603 IPYRPL--PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 660
+ Y P+ Q AG Q G + G + G+ + + G G + G G N
Sbjct: 211 VLYNPVVRTQPAG-----ATQMGSSGAGYGTSNRGDYSSSRVTRTGNGADFSNGGGRSYN 265
Query: 661 AAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGA 720
++ + NR P+ N ++ Q T+ +++P +++G
Sbjct: 266 -----------------------RRSDSDAANRGPPTHDENGEEIQ-TQNISIPADMVGC 301
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVE 778
+IG+ G+KI EIRK SGA I I+K+ +E + +R T+ G+ A A +L+ N+ E
Sbjct: 302 IIGRAGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGSAKANETALFLLYENLEAE 359
Query: 779 LLR 781
+R
Sbjct: 360 KMR 362
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 176/344 (51%), Gaps = 47/344 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G + + +A++++ + +
Sbjct: 55 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEGISKAYAVVARALL 114
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E + +GG NG + +L++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 115 EGAPSMG--MGGVVSNNGTHPI---KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQK 169
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPL--PQNAGGPGLIG 174
+MLP STER V ++G P+ + +A+++IC ++D +G T+ Y P+ Q AG
Sbjct: 170 EMLPQSTERVVEVQGTPEGIQRAVWEICKCLIDDWQRGTGTVLYNPVVRTQPAG-----A 224
Query: 175 NQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR 234
Q G + G + G+ + + G G + G G N
Sbjct: 225 TQMGSSGAGYGTSNRGDYSSSRVTRTGNGADFSNGGGRSYN------------------- 265
Query: 235 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
++ + NR P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA
Sbjct: 266 ----RRSDSDAANRGPPTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGAR 320
Query: 295 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I I+K+ +E + +R T+ G+ A A +L+ N+ E +R
Sbjct: 321 ISIAKAPHDE--TGERMFTIMGSAKANETALFLLYENLEAEKMR 362
>gi|449667206|ref|XP_002160219.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Hydra
magnipapillata]
Length = 393
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 185/380 (48%), Gaps = 68/380 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K G IIGK G+T+K+LR E + + + DS++ ER++++ S ++ A ++
Sbjct: 29 LRFLLMSKHAGGIIGKGGQTIKRLRSEYSATVNVPDSNSSERVLSIAASQEN---AIKIL 85
Query: 502 TKNIEEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+ + FH+ + GG ++Q ++ +V +SQ G IIG+ G +IK +RE + A+V
Sbjct: 86 CECLPLFHEPPYQVSGGGSQNQKNEFEVDFLVHSSQVGGIIGRSGFKIKELREQTNANVK 145
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIG 619
V + LPNSTER V + G + A+ +I IM +SP KG Y P + GG
Sbjct: 146 VFQECLPNSTERVVALGGGEAEIVDALKKILEIMQESPIKGNIALYDPSQEWNGG----- 200
Query: 620 NQFGMQNSLMGAP--DMGNNPLAGLAALGLGGNSGGGMGGGLNA---------------- 661
Q++ G+P +M + PL LG G N G G +
Sbjct: 201 -----QDNYSGSPMNNMRSGPL-----LGRGNNRSGMGRSGGRSGFQGGNFGQQGGGFGR 250
Query: 662 AALAALASSQLKTN-------------------HMPRNQNQNQNQHNR----NNRDGPSQ 698
A +++ S+Q TN N +Q+ N N N D
Sbjct: 251 AVSSSITSNQESTNGGSHGGSFQNDFSGGQEFGGGGFNNSQSFNDFNSQGSGNGGDSIFG 310
Query: 699 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 758
+ + Q Q+T +PN+L GA+IG+GG +I IR+ SGA I+I E + NDR IT
Sbjct: 311 QGDIQTTQVT----IPNDLAGAIIGRGGERIRNIRQRSGADIKIQDPGEGK---NDRVIT 363
Query: 759 MTGTPDAIALAQYLINMSVE 778
+TGT D I Q+L+ SV
Sbjct: 364 ITGTQDQIQYGQFLMQQSVR 383
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 181/373 (48%), Gaps = 68/373 (18%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G IIGK G+T+K+LR E + + + DS++ ER++++ S ++ A ++ + + F
Sbjct: 36 KHAGGIIGKGGQTIKRLRSEYSATVNVPDSNSSERVLSIAASQEN---AIKILCECLPLF 92
Query: 64 HKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
H+ + GG ++Q ++ +V +SQ G IIG+ G +IK +RE + A+V V + LP
Sbjct: 93 HEPPYQVSGGGSQNQKNEFEVDFLVHSSQVGGIIGRSGFKIKELREQTNANVKVFQECLP 152
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQN 181
NSTER V + G + A+ +I IM +SP KG Y P + GG Q+
Sbjct: 153 NSTERVVALGGGEAEIVDALKKILEIMQESPIKGNIALYDPSQEWNGG----------QD 202
Query: 182 SLMGAP--DMGNNPLAGLAALGLGGNSGGGMGGGLNA----------------AALAALA 223
+ G+P +M + PL LG G N G G + A +++
Sbjct: 203 NYSGSPMNNMRSGPL-----LGRGNNRSGMGRSGGRSGFQGGNFGQQGGGFGRAVSSSIT 257
Query: 224 SSQLKTN-------------------HMPRNQNQNQNQHNR----NNRDGPSQKTNQQQN 260
S+Q TN N +Q+ N N N D + + Q
Sbjct: 258 SNQESTNGGSHGGSFQNDFSGGQEFGGGGFNNSQSFNDFNSQGSGNGGDSIFGQGDIQTT 317
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
Q+T +PN+L GA+IG+GG +I IR+ SGA I+I E + NDR IT+TGT D
Sbjct: 318 QVT----IPNDLAGAIIGRGGERIRNIRQRSGADIKIQDPGEGK---NDRVITITGTQDQ 370
Query: 321 IALAQYLINMSVE 333
I Q+L+ SV
Sbjct: 371 IQYGQFLMQQSVR 383
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR ++ + G IIGKGG IK +R A+V V NS+ER ++I + +
Sbjct: 27 VTLRFLLMSKHAGGIIGKGGQTIKRLRSEYSATVNVPD---SNSSERVLSIAASQENAIK 83
Query: 140 AIYQICLIMVDSPP 153
+ + CL + PP
Sbjct: 84 ILCE-CLPLFHEPP 96
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR ++ + G IIGKGG IK +R A+V V NS+ER ++I + +
Sbjct: 27 VTLRFLLMSKHAGGIIGKGGQTIKRLRSEYSATVNVPD---SNSSERVLSIAASQENAIK 83
Query: 585 AIYQICLIMVDSPP 598
+ + CL + PP
Sbjct: 84 ILCE-CLPLFHEPP 96
>gi|378726019|gb|EHY52478.1| hypothetical protein HMPREF1120_00690 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 176/362 (48%), Gaps = 60/362 (16%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
+YA Q T +R I+ KE G IIGK+G+ V LREE+G K +S +R++T
Sbjct: 40 DYAQSQLT-----LRAIVSTKEAGVIIGKAGKNVADLREETGVKAGVSKVVQGVHDRVLT 94
Query: 487 VIGSMDSLFRAFSLITKNIEE---------FHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
V G + + +A+SL+ K + E +N H +RL++ +Q G
Sbjct: 95 VTGPLSGIAKAYSLVAKGLLEGAPQVGMGGVVQNNGTH----------PIRLLISHNQMG 144
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+IIG+ G +IK I++ SG + +MLP STER V ++G P+ + +A+++I +VD
Sbjct: 145 TIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIDKAVWEIGKCLVDDW 204
Query: 598 PKGA-TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
+G T+ Y P + G G + G G GNN + G + GN
Sbjct: 205 QRGTGTVLYNPAVRVQVGSGPLPPAVG------GGLPAGNNYIGGGRSYNRTGN------ 252
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
A + + + N +PR G T + T+ +++P +
Sbjct: 253 -----GADFSESRGYTRGNDLPRG--------------GIPMVTEDGEEVQTQNISIPAD 293
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
++G +IG+GG+KI EIRK SGA I I+K+ +D+ +R T+ G+ A A YL+ +
Sbjct: 294 MVGCIIGRGGSKISEIRKTSGARISIAKAP--HDDTGERMFTIMGSASANERALYLLYEN 351
Query: 777 VE 778
+E
Sbjct: 352 LE 353
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 55/342 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LREE+G K +S +R++TV G + + +A+SL+ K +
Sbjct: 55 KEAGVIIGKAGKNVADLREETGVKAGVSKVVQGVHDRVLTVTGPLSGIAKAYSLVAKGLL 114
Query: 62 E---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
E +N H +RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 115 EGAPQVGMGGVVQNNGTH----------PIRLLISHNQMGTIIGRQGLKIKHIQDVSGVR 164
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPG 171
+ +MLP STER V ++G P+ + +A+++I +VD +G T+ Y P + G G
Sbjct: 165 MVAQKEMLPQSTERIVEVQGTPEGIDKAVWEIGKCLVDDWQRGTGTVLYNPAVRVQVGSG 224
Query: 172 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 231
+ G G GNN + G + GN A + + + N
Sbjct: 225 PLPPAVG------GGLPAGNNYIGGGRSYNRTGN-----------GADFSESRGYTRGND 267
Query: 232 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
+PR G T + T+ +++P +++G +IG+GG+KI EIRK S
Sbjct: 268 LPRG--------------GIPMVTEDGEEVQTQNISIPADMVGCIIGRGGSKISEIRKTS 313
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
GA I I+K+ +D+ +R T+ G+ A A YL+ ++E
Sbjct: 314 GARISIAKAP--HDDTGERMFTIMGSASANERALYLLYENLE 353
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 221 ALASSQLKTNHMPRN-QNQNQNQHNRNNRDGPSQKTNQQ--QNQITKEMTVPNELIGAVI 277
A A S + NH+ N ++ NQ N R+ KT + Q+Q+T V + G +I
Sbjct: 2 ASAESPVNANHVDDNGLAESLNQLNVGERENEQPKTEEDYAQSQLTLRAIVSTKEAGVII 61
Query: 278 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
GK G + ++R+ +G +SK + +DR +T+TG IA A L+
Sbjct: 62 GKAGKNVADLREETGVKAGVSKVV---QGVHDRVLTVTGPLSGIAKAYSLV 109
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 666 ALASSQLKTNHMPRN-QNQNQNQHNRNNRDGPSQKTNQQ--QNQITKEMTVPNELIGAVI 722
A A S + NH+ N ++ NQ N R+ KT + Q+Q+T V + G +I
Sbjct: 2 ASAESPVNANHVDDNGLAESLNQLNVGERENEQPKTEEDYAQSQLTLRAIVSTKEAGVII 61
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
GK G + ++R+ +G +SK + +DR +T+TG IA A L+
Sbjct: 62 GKAGKNVADLREETGVKAGVSKVV---QGVHDRVLTVTGPLSGIAKAYSLV 109
>gi|336469496|gb|EGO57658.1| hypothetical protein NEUTE1DRAFT_116898 [Neurospora tetrasperma
FGSC 2508]
gi|350290860|gb|EGZ72074.1| hypothetical protein NEUTE2DRAFT_144709 [Neurospora tetrasperma
FGSC 2509]
Length = 371
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 181/349 (51%), Gaps = 48/349 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ +A++
Sbjct: 52 LRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDAVSKAYA 111
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
++ +++ E + +GG NG + +L++ +Q G++IG+ G +IK I++ SG
Sbjct: 112 VVARSLLEGAPSVG--MGGVISANGTHPI---KLLISHNQMGTVIGRQGLKIKHIQDVSG 166
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + G
Sbjct: 167 VRMVAQKEMLPQSTERVVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRGGGQ 226
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
P L G++ Q G+ + + G G + GG
Sbjct: 227 P-LGGDRNYPQERSYGS--------SRVTRTGNGADFSSNSGG----------------- 260
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P N+ + + +R P+ N ++ Q T+ +++P +++G +IG+ GTKI EIRK
Sbjct: 261 --RPYNRRSDSDAASRGP---PTHDENGEELQ-TQNISIPADMVGCIIGRQGTKISEIRK 314
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
SGA I I+K +E S +R T+ G+ A A YL+ N+ E R
Sbjct: 315 ASGARISIAKGPHDE--SGERMFTIMGSAKANETALYLLYENLEAEKTR 361
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 177/342 (51%), Gaps = 48/342 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ +A++++ +++
Sbjct: 59 KEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDAVSKAYAVVARSLL 118
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E + +GG NG + +L++ +Q G++IG+ G +IK I++ SG +
Sbjct: 119 EGAPSVG--MGGVISANGTHPI---KLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQK 173
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + G P L G++
Sbjct: 174 EMLPQSTERVVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRGGGQP-LGGDR 232
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
Q G+ + + G G + GG P N+
Sbjct: 233 NYPQERSYGS--------SRVTRTGNGADFSSNSGG-------------------RPYNR 265
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ + +R P+ N ++ Q T+ +++P +++G +IG+ GTKI EIRK SGA I
Sbjct: 266 RSDSDAASRGP---PTHDENGEELQ-TQNISIPADMVGCIIGRQGTKISEIRKASGARIS 321
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K +E S +R T+ G+ A A YL+ N+ E R
Sbjct: 322 IAKGPHDE--SGERMFTIMGSAKANETALYLLYENLEAEKTR 361
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 56 ITKNIEEFHKNQNK-HLGGNGE----------SQLIQLRLIVPASQCGSIIGKGGSQIKT 104
I +N++ + N+ LG +GE + LR IV + + G IIGKGG +
Sbjct: 15 IEENLDHLKLDDNEPRLGPDGEPAPRTDEEYAQTTLTLRAIVSSKEAGVIIGKGGQNVAN 74
Query: 105 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
+R+ +G V S ++ +R + I G DAV++A + +++ P
Sbjct: 75 LRDETGVKAGV-SKVVQGVHDRVLTITGGCDAVSKAYAVVARSLLEGAP 122
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 501 ITKNIEEFHKNQNK-HLGGNGE----------SQLIQLRLIVPASQCGSIIGKGGSQIKT 549
I +N++ + N+ LG +GE + LR IV + + G IIGKGG +
Sbjct: 15 IEENLDHLKLDDNEPRLGPDGEPAPRTDEEYAQTTLTLRAIVSSKEAGVIIGKGGQNVAN 74
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
+R+ +G V S ++ +R + I G DAV++A + +++ P
Sbjct: 75 LRDETGVKAGV-SKVVQGVHDRVLTITGGCDAVSKAYAVVARSLLEGAP 122
>gi|296418898|ref|XP_002839062.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635056|emb|CAZ83253.1| unnamed protein product [Tuber melanosporum]
Length = 354
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 180/364 (49%), Gaps = 43/364 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
MR ++ E ++IGK GE V ++R + +K +SD ERI+TV G++D++ +AF
Sbjct: 1 MRAVITSAEAATVIGKGGENVTQIRRMAEAKCTVSDYQRGAGERILTVSGAVDAVAKAFG 60
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + + N+ + +S+ LRL+VP GSIIGK G +I+ I+E SGA +
Sbjct: 61 LIIRTL----NNEPLEEASSPQSKTYPLRLLVPHILIGSIIGKSGGRIREIQEASGARLN 116
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA----------- 601
+ LP STER + + GV DAV A Y I +V+ P A
Sbjct: 117 ASGSCLPLSTERSLVVLGVADAVHIATYYIANTLVEQLTERFGGPAASAYATRSGGPAGP 176
Query: 602 ------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
+PY+P P + G GN + A NNP G+ L G
Sbjct: 177 MPGGMQVVPYQPQPLH----GSYGNPDTYKRHNNNAQRTPNNPY-GIPYLH-GPAPAPVP 230
Query: 656 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ-ITKEMTVP 714
++ A A ++ H P Q P+ N Q +T+++ +P
Sbjct: 231 QAPIHYADPQAASAYSGAGPHQP---GQAGAGPTPQQGPAPNPMANMLPGQPLTQQIFIP 287
Query: 715 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
N+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT + +A Y++
Sbjct: 288 NDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTQECNQMALYMLY 344
Query: 775 MSVE 778
+E
Sbjct: 345 SRLE 348
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 176/356 (49%), Gaps = 43/356 (12%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R + +K +SD ERI+TV G++D++ +AF LI + +
Sbjct: 9 EAATVIGKGGENVTQIRRMAEAKCTVSDYQRGAGERILTVSGAVDAVAKAFGLIIRTL-- 66
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + +S+ LRL+VP GSIIGK G +I+ I+E SGA + + LP
Sbjct: 67 --NNEPLEEASSPQSKTYPLRLLVPHILIGSIIGKSGGRIREIQEASGARLNASGSCLPL 124
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
STER + + GV DAV A Y I +V+ P A +
Sbjct: 125 STERSLVVLGVADAVHIATYYIANTLVEQLTERFGGPAASAYATRSGGPAGPMPGGMQVV 184
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 218
PY+P P + G GN + A NNP G+ L G ++ A
Sbjct: 185 PYQPQPLH----GSYGNPDTYKRHNNNAQRTPNNPY-GIPYLH-GPAPAPVPQAPIHYAD 238
Query: 219 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ-ITKEMTVPNELIGAVI 277
A ++ H P Q P+ N Q +T+++ +PN+++GA+I
Sbjct: 239 PQAASAYSGAGPHQP---GQAGAGPTPQQGPAPNPMANMLPGQPLTQQIFIPNDMVGAII 295
Query: 278 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
GKGG KI EIR++SG++I+I +E +++SN+R +T+TGT + +A Y++ +E
Sbjct: 296 GKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTQECNQMALYMLYSRLE 348
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 114/285 (40%), Gaps = 55/285 (19%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ VP+ LIG++IGK G +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 85 RLLVPHILIGSIIGKSGGRIREIQEASGA--RLNASGSCLPLSTERSLVVLGVADAVHIA 142
Query: 325 QYLI-NMSVELLRANLNGEG------------------------------GGESNMDDFS 353
Y I N VE L G G N D +
Sbjct: 143 TYYIANTLVEQLTERFGGPAASAYATRSGGPAGPMPGGMQVVPYQPQPLHGSYGNPDTYK 202
Query: 354 SDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGG 413
NN P +NP +P L G A + + SG
Sbjct: 203 RHNNNAQRTP------NNPY--GIPYLH------GPAPAPVPQAPIHYADPQAASAYSGA 248
Query: 414 GSGNSG--GFGGVPQ---GPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREE 468
G G G G PQ PN G + + VG+IIGK G + ++R+
Sbjct: 249 GPHQPGQAGAGPTPQQGPAPNPMANMLPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQL 308
Query: 469 SGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE-EFHK 510
SGS I I++ ++ ER+VT+ G+ + A ++ +E E H+
Sbjct: 309 SGSVIKINEPQDNSNERLVTITGTQECNQMALYMLYSRLESEKHR 353
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ VP+ LIG++IGK G +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 85 RLLVPHILIGSIIGKSGGRIREIQEASGA--RLNASGSCLPLSTERSLVVLGVADAVHIA 142
Query: 770 QYLI-NMSVELLRANLNG 786
Y I N VE L G
Sbjct: 143 TYYIANTLVEQLTERFGG 160
>gi|378731796|gb|EHY58255.1| hypothetical protein HMPREF1120_06267 [Exophiala dermatitidis
NIH/UT8656]
Length = 492
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 176/368 (47%), Gaps = 46/368 (12%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E + IGK GE V ++R+ SG+K +SD S ERI+TV GS +++ +AF
Sbjct: 135 HIRAVISSAEAATCIGKGGENVTQIRKLSGAKCTVSDYSRGAVERILTVSGSQEAVSKAF 194
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 195 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARL 250
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------P-----------PKG 600
+ LP STER + + GV DAV A Y + + +V+ P P G
Sbjct: 251 NASDSCLPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 310
Query: 601 A------TIPYRPLPQNAGGPGLIGNQFGMQNSL----MGAPDMGNNPLAGLAALGLGGN 650
+PY +PQ AGG + + N+L A G + G A
Sbjct: 311 VIPGGMQVVPY--VPQPAGGQYGHPDTYKRHNTLPPQRAPAQPYGAPQVHGAAPQPYAPY 368
Query: 651 SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKE 710
+ AA+ +P Q + P Q QQ
Sbjct: 369 PQPYAATPRTPSYGAAVPQPAGPYGQVPPQPVVPHGQPAQPAHGMPGQPITQQ------- 421
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGT + +A
Sbjct: 422 IFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTQECNQMAL 478
Query: 771 YLINMSVE 778
Y++ +E
Sbjct: 479 YMLYSRLE 486
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 172/359 (47%), Gaps = 46/359 (12%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R+ SG+K +SD S ERI+TV GS +++ +AF LI + +
Sbjct: 144 EAATCIGKGGENVTQIRKLSGAKCTVSDYSRGAVERILTVSGSQEAVSKAFGLIIRTL-- 201
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 202 --NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPL 259
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------P-----------PKGA------TI 158
STER + + GV DAV A Y + + +V+ P P G +
Sbjct: 260 STERSLVVLGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGVIPGGMQVV 319
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSL----MGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
PY +PQ AGG + + N+L A G + G A
Sbjct: 320 PY--VPQPAGGQYGHPDTYKRHNTLPPQRAPAQPYGAPQVHGAAPQPYAPYPQPYAATPR 377
Query: 215 NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 274
+ AA+ +P Q + P Q QQ + +PN+++G
Sbjct: 378 TPSYGAAVPQPAGPYGQVPPQPVVPHGQPAQPAHGMPGQPITQQ-------IFIPNDMVG 430
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
A+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGT + +A Y++ +E
Sbjct: 431 AIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTQECNQMALYMLYSRLE 486
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N D PS Q + +P+ LIG++IGK G +I EI++ SGA R++ S
Sbjct: 202 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDSC 256
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
S +R++ + G DA+ +A Y + ++ VE L G
Sbjct: 257 LPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGG 295
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N D PS Q + +P+ LIG++IGK G +I EI++ SGA R++ S
Sbjct: 202 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEASGA--RLNASDSC 256
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S +R++ + G DA+ +A Y + ++ VE L G
Sbjct: 257 LPLSTERSLVVLGVADAVHIATYYVAVTLVEQLTERFGG 295
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ I +R ++ +++ + IGKGG + IR+ SGA V SD + ER + + G +
Sbjct: 130 ETNWIHIRAVISSAEAATCIGKGGENVTQIRKLSGAKCTV-SDYSRGAVERILTVSGSQE 188
Query: 136 AVTQAI 141
AV++A
Sbjct: 189 AVSKAF 194
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
E+ I +R ++ +++ + IGKGG + IR+ SGA V SD + ER + + G +
Sbjct: 130 ETNWIHIRAVISSAEAATCIGKGGENVTQIRKLSGAKCTV-SDYSRGAVERILTVSGSQE 188
Query: 581 AVTQAI 586
AV++A
Sbjct: 189 AVSKAF 194
>gi|389641821|ref|XP_003718543.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
gi|351641096|gb|EHA48959.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
Length = 483
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 179/382 (46%), Gaps = 75/382 (19%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V K+R+ S +K +SD ERI+TV G +D++ +AF
Sbjct: 127 HIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSGIVDAVAKAF 186
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ + S+ LRL++P GSIIGKGG++IK I+E SGA +
Sbjct: 187 GLIIRTL----NNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARL 242
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP S+ER + + GV DAV A Y + +++ P A
Sbjct: 243 NASDSCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAYATRAGGPVG 302
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPD--------------MGNNPLA 640
+PY LPQ AGG +G +++ PD NP A
Sbjct: 303 AVPGGMQVVPY--LPQPAGG------NYGNRDNYGRRPDPRAGQMPPPAAHPYAPQNPYA 354
Query: 641 ----GLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP 696
A G G G + A + H P + GP
Sbjct: 355 PHQPNPAVPPHYGAQAGAYGAHVPAPHVGHAGPQVHGAPHQPMH----------GQMPGP 404
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
+ QQ + +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R
Sbjct: 405 GGASLTQQ------IYIPNDMVGAIIGKGGQKINEIRQVSGSVIKI---NEPQDNSNERL 455
Query: 757 ITMTGTPDAIALAQYLINMSVE 778
+T+TGT + +A Y++ +E
Sbjct: 456 VTITGTEECNRMALYMLYSRLE 477
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 175/373 (46%), Gaps = 75/373 (20%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V K+R+ S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 136 EAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 193
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + S+ LRL++P GSIIGKGG++IK I+E SGA + + LP
Sbjct: 194 --NNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCLPL 251
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-----------------TI 158
S+ER + + GV DAV A Y + +++ P A +
Sbjct: 252 SSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAYATRAGGPVGAVPGGMQVV 311
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPD--------------MGNNPLA----GLAAL 200
PY LPQ AGG +G +++ PD NP A A
Sbjct: 312 PY--LPQPAGG------NYGNRDNYGRRPDPRAGQMPPPAAHPYAPQNPYAPHQPNPAVP 363
Query: 201 GLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQN 260
G G G + A + H P + GP + QQ
Sbjct: 364 PHYGAQAGAYGAHVPAPHVGHAGPQVHGAPHQPMH----------GQMPGPGGASLTQQ- 412
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 413 -----IYIPNDMVGAIIGKGGQKINEIRQVSGSVIKI---NEPQDNSNERLVTITGTEEC 464
Query: 321 IALAQYLINMSVE 333
+A Y++ +E
Sbjct: 465 NRMALYMLYSRLE 477
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S+ ++ + +P+ LIG++IGKGG +I EI++ SGA R++ S S++R+
Sbjct: 199 SEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSSERS 256
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ + G DA+ +A Y + + L LN GG
Sbjct: 257 LVVMGVADAVHIATYYVGST---LLEQLNDRFGG 287
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S+ ++ + +P+ LIG++IGKGG +I EI++ SGA R++ S S++R+
Sbjct: 199 SEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSSERS 256
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ + G DA+ +A Y + + L LN GG
Sbjct: 257 LVVMGVADAVHIATYYVGST---LLEQLNDRFGG 287
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 120 HDESAWIHIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTV-SDYQKGAVERILTVSGI 178
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 179 VDAVAKAFGLIIRTLNNEP 197
>gi|261197389|ref|XP_002625097.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595727|gb|EEQ78308.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239606718|gb|EEQ83705.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327358051|gb|EGE86908.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 363
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 177/358 (49%), Gaps = 65/358 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A++
Sbjct: 46 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYA 105
Query: 500 LITKNIEE---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTI 550
++ K + E N H +RL++ +Q G+IIG+ G +IK I
Sbjct: 106 IVAKGLLEGAPQLGMGGVVSNTGTH----------PVRLLISHNQMGTIIGRQGLKIKYI 155
Query: 551 RETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLP 609
++ SG + +MLP STER V ++G P+ + +A+++I ++D +G T+ Y P
Sbjct: 156 QDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAV 215
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
+ + G G + N G +G AA G GG S G G + +
Sbjct: 216 RASVGGGPMNNSLG----------------SGTAAGGYGGRSYNRTGNGADFS------- 252
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKG 725
+Q + R+N D ++ T + T+ +++P++++G +IG+G
Sbjct: 253 ------------DQTGGYNRRSNSDAANRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRG 300
Query: 726 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
G+KI EIR+ SGA I I+K+ +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 301 GSKISEIRRSSGARISIAKAPHDE--TGERMFTIMGSAAANEKALYLLYENLEAEKMR 356
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 173/351 (49%), Gaps = 65/351 (18%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A++++ K +
Sbjct: 53 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYAIVAKGLL 112
Query: 62 E---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
E N H +RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 113 EGAPQLGMGGVVSNTGTH----------PVRLLISHNQMGTIIGRQGLKIKYIQDASGVR 162
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPG 171
+ +MLP STER V ++G P+ + +A+++I ++D +G T+ Y P + + G G
Sbjct: 163 MVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRASVGGG 222
Query: 172 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 231
+ N G +G AA G GG S G G + +
Sbjct: 223 PMNNSLG----------------SGTAAGGYGGRSYNRTGNGADFS-------------- 252
Query: 232 MPRNQNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+Q + R+N D ++ T + T+ +++P++++G +IG+GG+KI EI
Sbjct: 253 -----DQTGGYNRRSNSDAANRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEI 307
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
R+ SGA I I+K+ +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 308 RRSSGARISIAKAPHDE--TGERMFTIMGSAAANEKALYLLYENLEAEKMR 356
>gi|440469758|gb|ELQ38855.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482264|gb|ELQ62771.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 490
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 178/379 (46%), Gaps = 79/379 (20%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V K+R+ S +K +SD ERI+TV G +D++ +AF
Sbjct: 127 HIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSGIVDAVAKAF 186
Query: 499 SLITKNI--EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI + + E + + H S+ LRL++P GSIIGKGG++IK I+E SGA
Sbjct: 187 GLIIRTLNNEPLSEPSSAH------SKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA 240
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA-------- 601
+ + LP S+ER + + GV DAV A Y + +++ P A
Sbjct: 241 RLNASDSCLPLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAYATRAGGP 300
Query: 602 ---------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPD--------------MGNNP 638
+PY LPQ AGG +G +++ PD NP
Sbjct: 301 VGAVPGGMQVVPY--LPQPAGG------NYGNRDNYGRRPDPRAGQMPPPAAHPYAPQNP 352
Query: 639 LA----GLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRD 694
A A G G G + A + H P +
Sbjct: 353 YAPHQPNPAVPPHYGAQAGAYGAHVPAPHVGHAGPQVHGAPHQPMH----------GQMP 402
Query: 695 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 754
GP + QQ + +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+
Sbjct: 403 GPGGASLTQQ------IYIPNDMVGAIIGKGGQKINEIRQVSGSVIKI---NEPQDNSNE 453
Query: 755 RTITMTGTPDAIALAQYLI 773
R +T+TGT + +A Y++
Sbjct: 454 RLVTITGTEECNRMALYML 472
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 174/370 (47%), Gaps = 79/370 (21%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI-- 60
E +IIGK GE V K+R+ S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 136 EAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTLNN 195
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + + H S+ LRL++P GSIIGKGG++IK I+E SGA + + L
Sbjct: 196 EPLSEPSSAH------SKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCL 249
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA----------------- 156
P S+ER + + GV DAV A Y + +++ P A
Sbjct: 250 PLSSERSLVVMGVADAVHIATYYVGSTLLEQLNDRFGGPAASAYATRAGGPVGAVPGGMQ 309
Query: 157 TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPD--------------MGNNPLA----GLA 198
+PY LPQ AGG +G +++ PD NP A A
Sbjct: 310 VVPY--LPQPAGG------NYGNRDNYGRRPDPRAGQMPPPAAHPYAPQNPYAPHQPNPA 361
Query: 199 ALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 258
G G G + A + H P + GP + Q
Sbjct: 362 VPPHYGAQAGAYGAHVPAPHVGHAGPQVHGAPHQPMH----------GQMPGPGGASLTQ 411
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
Q + +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT
Sbjct: 412 Q------IYIPNDMVGAIIGKGGQKINEIRQVSGSVIKI---NEPQDNSNERLVTITGTE 462
Query: 319 DAIALAQYLI 328
+ +A Y++
Sbjct: 463 ECNRMALYML 472
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S+ ++ + +P+ LIG++IGKGG +I EI++ SGA R++ S S++R+
Sbjct: 199 SEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSSERS 256
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ + G DA+ +A Y + + L LN GG
Sbjct: 257 LVVMGVADAVHIATYYVGST---LLEQLNDRFGG 287
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S+ ++ + +P+ LIG++IGKGG +I EI++ SGA R++ S S++R+
Sbjct: 199 SEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSSERS 256
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ + G DA+ +A Y + + L LN GG
Sbjct: 257 LVVMGVADAVHIATYYVGST---LLEQLNDRFGG 287
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 120 HDESAWIHIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTV-SDYQKGAVERILTVSGI 178
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 179 VDAVAKAFGLIIRTLNNEP 197
>gi|47223151|emb|CAG11286.1| unnamed protein product [Tetraodon nigroviridis]
Length = 414
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 162/346 (46%), Gaps = 77/346 (22%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR 496
GV +R +M GKEVGSIIGK GETVK++REE + T++ +
Sbjct: 13 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREED--------------LATLVAN------ 52
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
G + LRL++PASQCGS+IGKGG++IK IRE
Sbjct: 53 --------------------GTISTKPPVTLRLVIPASQCGSLIGKGGAKIKEIRE---- 88
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
E + + ++ C+ PP+GATIPYRP P A
Sbjct: 89 ---------------ECPLILIEHG---SVRTDCISQFKVPPQGATIPYRPSPSPAA--V 128
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQLKT 674
LIGNQ L A + ++P+ + GL + G+ + LA L ++
Sbjct: 129 LIGNQ------LFDASEFASHPMYSVTQGGLDLQQAYTLQNQYGIPHSELAKLHQLSMQQ 182
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQK--TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
P Q + ++ SQ+ ++T+ P +LIG++IG+ GTKI EI
Sbjct: 183 GLNPLAQPASAVIPGMDSNSQTSQELLIPNDPKRLTRFAPAPPQLIGSIIGRQGTKINEI 242
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
R++SGA I+I + + ++DR +T+TGTP +I LAQYLI +E
Sbjct: 243 RQVSGAQIKI---GSQLDGTSDRHVTITGTPVSINLAQYLITSCLE 285
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 157/337 (46%), Gaps = 77/337 (22%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++REE + T++ +
Sbjct: 22 MHGKEVGSIIGKKGETVKRIREED--------------LATLVAN--------------- 52
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
G + LRL++PASQCGS+IGKGG++IK IRE
Sbjct: 53 -----------GTISTKPPVTLRLVIPASQCGSLIGKGGAKIKEIRE------------- 88
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
E + + ++ C+ PP+GATIPYRP P A LIGNQ
Sbjct: 89 ------ECPLILIEHG---SVRTDCISQFKVPPQGATIPYRPSPSPAA--VLIGNQ---- 133
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG--GLNAAALAALASSQLKTNHMPRNQNQ 238
L A + ++P+ + GL + G+ + LA L ++ P Q
Sbjct: 134 --LFDASEFASHPMYSVTQGGLDLQQAYTLQNQYGIPHSELAKLHQLSMQQGLNPLAQPA 191
Query: 239 NQNQHNRNNRDGPSQK--TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ ++ SQ+ ++T+ P +LIG++IG+ GTKI EIR++SGA I+
Sbjct: 192 SAVIPGMDSNSQTSQELLIPNDPKRLTRFAPAPPQLIGSIIGRQGTKINEIRQVSGAQIK 251
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I + + ++DR +T+TGTP +I LAQYLI +E
Sbjct: 252 I---GSQLDGTSDRHVTITGTPVSINLAQYLITSCLE 285
>gi|85109816|ref|XP_963102.1| hypothetical protein NCU06251 [Neurospora crassa OR74A]
gi|28924753|gb|EAA33866.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 371
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 181/349 (51%), Gaps = 48/349 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ +A++
Sbjct: 52 LRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDAVSKAYA 111
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
++ +++ E + +GG NG + +L++ +Q G++IG+ G +IK I++ SG
Sbjct: 112 VVARSLLEGAPSVG--MGGVISANGTHPI---KLLISHNQMGTVIGRQGLKIKHIQDVSG 166
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + G
Sbjct: 167 VRMVAQKEMLPQSTERVVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRGGGQ 226
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
P L G++ Q G+ + + G G + GG
Sbjct: 227 P-LGGDRNYPQERSYGS--------SRVTRTGNGADFSSNSGG----------------- 260
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
P N+ + + +R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK
Sbjct: 261 --RPYNRRSDSDAASRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGRQGSKISEIRK 314
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
SGA I I+K +E S +R T+ G+ A A YL+ N+ E R
Sbjct: 315 ASGARISIAKGPHDE--SGERMFTIMGSAKANETALYLLYENLEAEKTR 361
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 177/342 (51%), Gaps = 48/342 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ +A++++ +++
Sbjct: 59 KEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDAVSKAYAVVARSLL 118
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E + +GG NG + +L++ +Q G++IG+ G +IK I++ SG +
Sbjct: 119 EGAPSVG--MGGVISANGTHPI---KLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQK 173
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + G P L G++
Sbjct: 174 EMLPQSTERVVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRGGGQP-LGGDR 232
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
Q G+ + + G G + GG P N+
Sbjct: 233 NYPQERSYGS--------SRVTRTGNGADFSSNSGG-------------------RPYNR 265
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ + +R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I
Sbjct: 266 RSDSDAASRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGRQGSKISEIRKASGARIS 321
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K +E S +R T+ G+ A A YL+ N+ E R
Sbjct: 322 IAKGPHDE--SGERMFTIMGSAKANETALYLLYENLEAEKTR 361
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 56 ITKNIEEFHKNQNK-HLGGNGE----------SQLIQLRLIVPASQCGSIIGKGGSQIKT 104
I +N++ + N+ LG +GE + LR IV + + G IIGKGG +
Sbjct: 15 IEENLDHLKLDDNEPRLGPDGEPAPRTDEEYAQTTLTLRAIVSSKEAGVIIGKGGQNVAN 74
Query: 105 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
+R+ +G V S ++ +R + I G DAV++A + +++ P
Sbjct: 75 LRDETGVKAGV-SKVVQGVHDRVLTITGGCDAVSKAYAVVARSLLEGAP 122
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 501 ITKNIEEFHKNQNK-HLGGNGE----------SQLIQLRLIVPASQCGSIIGKGGSQIKT 549
I +N++ + N+ LG +GE + LR IV + + G IIGKGG +
Sbjct: 15 IEENLDHLKLDDNEPRLGPDGEPAPRTDEEYAQTTLTLRAIVSSKEAGVIIGKGGQNVAN 74
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
+R+ +G V S ++ +R + I G DAV++A + +++ P
Sbjct: 75 LRDETGVKAGV-SKVVQGVHDRVLTITGGCDAVSKAYAVVARSLLEGAP 122
>gi|452978145|gb|EME77909.1| hypothetical protein MYCFIDRAFT_63821 [Pseudocercospora fijiensis
CIRAD86]
Length = 480
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 175/362 (48%), Gaps = 45/362 (12%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R I+ E ++IGK GE V ++R +G+K +S+ + ERI+TV G +D++ +AF
Sbjct: 118 HVRAIISSAEAATVIGKGGENVTQIRRLAGAKCTVSEYTRGAVERILTVSGHVDAVAKAF 177
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + + Q +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 178 GLIIRTLNQEPLEQ----ASTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARL 233
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP------PKGA----------- 601
+ LP STER + + GV DAV A Y + +V+ P +
Sbjct: 234 NASESCLPLSTERSLVVLGVADAVHIATYYVGSTLVEQLTDRFGGPAASNYAGRHGGPQG 293
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQN G G +G+ + G P NP G
Sbjct: 294 VVPGGMQVVPY--VPQNTG--GQMGHPDNFRKHSNGPPRTPANPYGQPYMHGQPPQQHPQ 349
Query: 655 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---NQITKEM 711
AA+ A P H GP Q+ Q IT+++
Sbjct: 350 QPMHYGAASPRAPYVGAGPQQPQPYGHAAPSQAHA-----GPPQQPVQGMVPGQPITQQI 404
Query: 712 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 771
+PN+++GA+IGKGG KI EIR++SG++I+I +E ++++N+R +T+TGT + +A Y
Sbjct: 405 FIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNNNERLVTITGTQECNQMALY 461
Query: 772 LI 773
++
Sbjct: 462 ML 463
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 171/353 (48%), Gaps = 45/353 (12%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R +G+K +S+ + ERI+TV G +D++ +AF LI + + +
Sbjct: 127 EAATVIGKGGENVTQIRRLAGAKCTVSEYTRGAVERILTVSGHVDAVAKAFGLIIRTLNQ 186
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
Q +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 187 EPLEQ----ASTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPL 242
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSP------PKGA------------------TI 158
STER + + GV DAV A Y + +V+ P + +
Sbjct: 243 STERSLVVLGVADAVHIATYYVGSTLVEQLTDRFGGPAASNYAGRHGGPQGVVPGGMQVV 302
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 218
PY +PQN G G +G+ + G P NP G AA+
Sbjct: 303 PY--VPQNTG--GQMGHPDNFRKHSNGPPRTPANPYGQPYMHGQPPQQHPQQPMHYGAAS 358
Query: 219 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---NQITKEMTVPNELIGA 275
A P H GP Q+ Q IT+++ +PN+++GA
Sbjct: 359 PRAPYVGAGPQQPQPYGHAAPSQAHA-----GPPQQPVQGMVPGQPITQQIFIPNDMVGA 413
Query: 276 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+IGKGG KI EIR++SG++I+I +E ++++N+R +T+TGT + +A Y++
Sbjct: 414 IIGKGGAKINEIRQLSGSVIKI---NEPQDNNNERLVTITGTQECNQMALYML 463
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 124/304 (40%), Gaps = 50/304 (16%)
Query: 247 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
N++ Q + Q + +P+ LIG++IGK G +I EI++ SGA + S+S
Sbjct: 185 NQEPLEQASTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPL-- 242
Query: 307 SNDRTITMTGTPDAIALAQYLINMS-VELLRANLNGE----------------------- 342
S +R++ + G DA+ +A Y + + VE L G
Sbjct: 243 STERSLVVLGVADAVHIATYYVGSTLVEQLTDRFGGPAASNYAGRHGGPQGVVPGGMQVV 302
Query: 343 -------GGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTS 395
GG + D+F +N P P +NP P + + +
Sbjct: 303 PYVPQNTGGQMGHPDNFRKHSNGPPRTP------ANPYGQ--PYMHGQPPQQHPQQPM-H 353
Query: 396 LSALGGLSDLLGGGSSG----GGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEV 451
A + +G G G + S G PQ P + + +++ + V
Sbjct: 354 YGAASPRAPYVGAGPQQPQPYGHAAPSQAHAGPPQQPVQGMVPGQPITQQI--FIPNDMV 411
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
G+IIGK G + ++R+ SGS I I++ + ER+VT+ G+ + A ++ + E
Sbjct: 412 GAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQMALYMLYSRLGESS 471
Query: 510 KNQN 513
KN N
Sbjct: 472 KNSN 475
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 692 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
N++ Q + Q + +P+ LIG++IGK G +I EI++ SGA + S+S
Sbjct: 185 NQEPLEQASTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPL-- 242
Query: 752 SNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S +R++ + G DA+ +A Y + + VE L G
Sbjct: 243 STERSLVVLGVADAVHIATYYVGSTLVEQLTDRFGG 278
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES + +R I+ +++ ++IGKGG + IR +GA V S+ + ER + + G D
Sbjct: 113 ESNWLHVRAIISSAEAATVIGKGGENVTQIRRLAGAKCTV-SEYTRGAVERILTVSGHVD 171
Query: 136 AVTQAIYQICLIMVDSP------PKGATIPYR 161
AV +A I + P P+ T P R
Sbjct: 172 AVAKAFGLIIRTLNQEPLEQASTPQSKTYPLR 203
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES + +R I+ +++ ++IGKGG + IR +GA V S+ + ER + + G D
Sbjct: 113 ESNWLHVRAIISSAEAATVIGKGGENVTQIRRLAGAKCTV-SEYTRGAVERILTVSGHVD 171
Query: 581 AVTQAIYQICLIMVDSP------PKGATIPYR 606
AV +A I + P P+ T P R
Sbjct: 172 AVAKAFGLIIRTLNQEPLEQASTPQSKTYPLR 203
>gi|398397391|ref|XP_003852153.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
gi|339472034|gb|EGP87129.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
Length = 362
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 182/359 (50%), Gaps = 46/359 (12%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V LR+++G + +S +R++T
Sbjct: 35 EYAQAQLT-----LRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLT 89
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGS 545
V G++ + A+ L+ ++ + +GG G +RL++ +Q G+IIG+ G
Sbjct: 90 VTGALTGIADAYGLVADSLVKGAPQMG--MGGVVGSPNTHPIRLLISHNQMGTIIGRQGL 147
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIP 604
+IK I++ SG + +MLP STER V ++G P+ + +++++I ++D +G T+
Sbjct: 148 KIKQIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQKSVWEIGKCLIDDEQRGYGTVL 207
Query: 605 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
Y P + G GAP N G + +G GG + N A
Sbjct: 208 YSPAVRVQG----------------GAPPAIN----GASPVGFGGGAPRSFARTGNGADF 247
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
+ A + +++ PR N + GP ++ T+ +++P +++G +IG+
Sbjct: 248 TSGAPA---SSYPPR--------RNGGSDAGPPPVVEDGEDIQTQNISIPADMVGCIIGR 296
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
GG+KI EIRK SGA I I+K+ +E S +R T+TG P A A YL+ N+ E +R
Sbjct: 297 GGSKISEIRKSSGARISIAKAPHDE--SGERMFTITGGPSANEKALYLLYENLEAEKMR 353
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 174/339 (51%), Gaps = 41/339 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+++G + +S +R++TV G++ + A+ L+ ++
Sbjct: 50 KEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGALTGIADAYGLVADSLV 109
Query: 62 EFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+ +GG G +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 110 KGAPQMG--MGGVVGSPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEML 167
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P+ + +++++I ++D +G T+ Y P + G
Sbjct: 168 PQSTERIVEVQGTPEGIQKSVWEIGKCLIDDEQRGYGTVLYSPAVRVQG----------- 216
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
GAP N G + +G GG + N A + A + +++ PR
Sbjct: 217 -----GAPPAIN----GASPVGFGGGAPRSFARTGNGADFTSGAPA---SSYPPR----- 259
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
N + GP ++ T+ +++P +++G +IG+GG+KI EIRK SGA I I+K
Sbjct: 260 ---RNGGSDAGPPPVVEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAK 316
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+ +E S +R T+TG P A A YL+ N+ E +R
Sbjct: 317 APHDE--SGERMFTITGGPSANEKALYLLYENLEAEKMR 353
>gi|315055291|ref|XP_003177020.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
gi|311338866|gb|EFQ98068.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
Length = 367
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 179/350 (51%), Gaps = 49/350 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYS 109
Query: 500 LITKNIEEFHKNQNKHLGGNGESQ---LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
++ K++ E +G G Q +RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 110 IVAKSLLEGAP----QMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGV 165
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNA--G 613
+ +MLP STER V ++G P+ + +AI++I ++D +G T+ Y P + +
Sbjct: 166 RMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRASVGS 225
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
GPG P G+NP S GG N A S
Sbjct: 226 GPGQ-------------GPVAGSNP------------SYGGSSRSYNRTGNGADFSDH-- 258
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
P + N+ N N NR P + ++ Q T+ +++P++++G +IG+GGTKI EIR
Sbjct: 259 ----PGSYNRRGNNDN-PNRGIPLVTEDGEEVQ-TQNISIPSDMVGCIIGRGGTKISEIR 312
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
+ SGA I I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 313 RSSGARISIAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 360
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 175/343 (51%), Gaps = 49/343 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S++ K++
Sbjct: 57 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYSIVAKSLL 116
Query: 62 EFHKNQNKHLGGNGESQ---LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
E +G G Q +RL++ +Q G+IIG+ G +IK I++ SG + +
Sbjct: 117 EGAP----QMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKE 172
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNA--GGPGLIGN 175
MLP STER V ++G P+ + +AI++I ++D +G T+ Y P + + GPG
Sbjct: 173 MLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRASVGSGPGQ--- 229
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
P G+NP S GG N A S P +
Sbjct: 230 ----------GPVAGSNP------------SYGGSSRSYNRTGNGADFSDH------PGS 261
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
N+ N N NR P + ++ Q T+ +++P++++G +IG+GGTKI EIR+ SGA I
Sbjct: 262 YNRRGNNDN-PNRGIPLVTEDGEEVQ-TQNISIPSDMVGCIIGRGGTKISEIRRSSGARI 319
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 320 SIAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 360
>gi|302916853|ref|XP_003052237.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733176|gb|EEU46524.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 183/365 (50%), Gaps = 53/365 (14%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 42 EYAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLT 96
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
+ G D++ RA++++ + + E +GG +S ++L++ +Q G+IIG+ G
Sbjct: 97 ITGGCDAISRAYAIVARALLEGAPAMG--MGGIVQSNGTHPIKLLISHNQMGTIIGRQGL 154
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + +MLP STER V ++G P+ + +A+++IC +VD +G T+
Sbjct: 155 KIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVL 214
Query: 605 YRPLPQN------AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 658
Y P+ + + G G G G S G+P + G G + G
Sbjct: 215 YNPVVRTQPASSTSVGSGGAGYSQGSGRSEYGSPR--------VMRTGNGADFSNG---- 262
Query: 659 LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELI 718
+ P N+ + + R P+ N ++ Q T+ +++P +++
Sbjct: 263 ----------------SSRPYNRRSDSDAAIRGP---PTHDENGEEIQ-TQNISIPADMV 302
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMS 776
G +IG+ G+KI EIRK SGA I I+K+ +E + +R T+ GT A A +L+ N+
Sbjct: 303 GCIIGRAGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGTAKANESALFLLYENLE 360
Query: 777 VELLR 781
E +R
Sbjct: 361 AEKMR 365
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 175/345 (50%), Gaps = 48/345 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 57 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRAYAIVARALL 116
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 117 EGAPAMG--MGGIVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEML 174
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQN------AGGPGLI 173
P STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + + G G
Sbjct: 175 PQSTERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRTQPASSTSVGSGGA 234
Query: 174 GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP 233
G G S G+P + G G + G + P
Sbjct: 235 GYSQGSGRSEYGSPR--------VMRTGNGADFSNG--------------------SSRP 266
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
N+ + + R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA
Sbjct: 267 YNRRSDSDAAIRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGA 322
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I I+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 323 RISIAKAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 365
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 251 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 35 PAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 91
Query: 309 DRTITMTGTPDAIALAQYLI 328
DR +T+TG DAI+ A ++
Sbjct: 92 DRVLTITGGCDAISRAYAIV 111
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 696 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 35 PAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 91
Query: 754 DRTITMTGTPDAIALAQYLI 773
DR +T+TG DAI+ A ++
Sbjct: 92 DRVLTITGGCDAISRAYAIV 111
>gi|425769369|gb|EKV07864.1| hypothetical protein PDIP_71440 [Penicillium digitatum Pd1]
gi|425770994|gb|EKV09451.1| hypothetical protein PDIG_62050 [Penicillium digitatum PHI26]
Length = 364
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 175/344 (50%), Gaps = 45/344 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + SL RA++
Sbjct: 47 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLRSLARAYA 106
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
++ K + E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 107 IVAKGLLEGAPQMG--MGGIVSNNGTHPI---RLLISHNQMGTIIGRQGLKIKHIQDASG 161
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +AI++I ++D +G T+ Y P
Sbjct: 162 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLLDDWQRGTGTVLYNP------- 214
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
++ SL G+ + +NP AG G N A S
Sbjct: 215 --------AVRASLSGSQPLNSNPPAG------NGYQNNANSRQYNRTGNGADFSDG--- 257
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
N+ N + NR G Q T + T+ +++P +++G +IG+GGTKI EIR+
Sbjct: 258 ---SYNRRSNSDAGNR----GYPQVTEDGEEIQTQNISIPADMVGCIIGRGGTKITEIRR 310
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
SGA I I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 311 SSGARISIAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 352
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 171/337 (50%), Gaps = 45/337 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + SL RA++++ K +
Sbjct: 54 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLRSLARAYAIVAKGLL 113
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 114 EGAPQMG--MGGIVSNNGTHPI---RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQK 168
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +AI++I ++D +G T+ Y P
Sbjct: 169 EMLPQSTERIVEVQGTPEGIEKAIWEIGKCLLDDWQRGTGTVLYNP-------------- 214
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
++ SL G+ + +NP AG G N A S N+
Sbjct: 215 -AVRASLSGSQPLNSNPPAG------NGYQNNANSRQYNRTGNGADFSDG------SYNR 261
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + NR G Q T + T+ +++P +++G +IG+GGTKI EIR+ SGA I
Sbjct: 262 RSNSDAGNR----GYPQVTEDGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARIS 317
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 318 IAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 352
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 61/352 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + SL RA++
Sbjct: 49 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLRSLARAYA 108
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
++ K + E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 109 IVAKGLLEGAPQMG--MGGIVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASG 163
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +AI++I ++D +G T+ Y P
Sbjct: 164 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLLDDWQRGTGTVLYNP------- 216
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAG--------LAALGLGGNSGGGMGGGLNAAALAA 666
++ SL G+ + NNP AG GN GG N
Sbjct: 217 --------AVRASLSGSQPLNNNPPAGNGYQNNTSSRQYNRTGNGADFSDGGYN------ 262
Query: 667 LASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
R N + NR P + ++ Q T+ +++P +++G +IG+GG
Sbjct: 263 ------------RRSNSDA-----GNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRGG 304
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
TKI EIR+ SGA I I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 305 TKITEIRRSSGARISIAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 354
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 172/345 (49%), Gaps = 61/345 (17%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + SL RA++++ K +
Sbjct: 56 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLRSLARAYAIVAKGLL 115
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 116 EGAPQMG--MGGIVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQK 170
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +AI++I ++D +G T+ Y P
Sbjct: 171 EMLPQSTERIVEVQGTPEGIEKAIWEIGKCLLDDWQRGTGTVLYNP-------------- 216
Query: 177 FGMQNSLMGAPDMGNNPLAG--------LAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
++ SL G+ + NNP AG GN GG N
Sbjct: 217 -AVRASLSGSQPLNNNPPAGNGYQNNTSSRQYNRTGNGADFSDGGYN------------- 262
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
R N + NR P + ++ Q T+ +++P +++G +IG+GGTKI EIR
Sbjct: 263 -----RRSNSDA-----GNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRGGTKITEIR 311
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+ SGA I I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 312 RSSGARISIAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 354
>gi|258566349|ref|XP_002583919.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
gi|237907620|gb|EEP82021.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
Length = 366
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 60/355 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYG 109
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQ------LRLIVPASQCGSIIGKGGSQIKTIRET 553
++ K++ E +GG +IQ +RL++ +Q G+IIG+ G +IK I++
Sbjct: 110 MVAKSLLEGAPQVG--MGG-----IIQNNGTHPVRLLISHNQMGTIIGRQGLKIKYIQDA 162
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNA 612
SG + +MLP STER V ++G P+ + +A+++I ++D +G T+ Y P +
Sbjct: 163 SGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRAN 222
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G G + + F +G NP GG S G G A S Q
Sbjct: 223 VGGGQMNSSF-----------LGPNP-------NYGGRSYNRTGNG-------ADFSDQP 257
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGTK 728
+ + + R+N D P++ T + T+ +++P++++G +IG+GG+K
Sbjct: 258 SSGY-----------NRRHNSDAPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSK 306
Query: 729 IFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
I EIR+ SGA I I+K+S +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 307 ISEIRRSSGARISIAKASHDE--TGERMFTIMGSAQANEKALYLLYENLEAEKMR 359
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 178/348 (51%), Gaps = 60/348 (17%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+ ++ K++
Sbjct: 57 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYGMVAKSLL 116
Query: 62 EFHKNQNKHLGGNGESQLIQ------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
E +GG +IQ +RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 117 EGAPQVG--MGG-----IIQNNGTHPVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVA 169
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIG 174
+MLP STER V ++G P+ + +A+++I ++D +G T+ Y P + G G +
Sbjct: 170 QKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRANVGGGQMN 229
Query: 175 NQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR 234
+ F +G NP GG S G G A S Q + +
Sbjct: 230 SSF-----------LGPNP-------NYGGRSYNRTGNG-------ADFSDQPSSGY--- 261
Query: 235 NQNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
+ R+N D P++ T + T+ +++P++++G +IG+GG+KI EIR+
Sbjct: 262 --------NRRHNSDAPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRS 313
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
SGA I I+K+S +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 314 SGARISIAKASHDE--TGERMFTIMGSAQANEKALYLLYENLEAEKMR 359
>gi|340959534|gb|EGS20715.1| hypothetical protein CTHT_0025510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 373
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 181/360 (50%), Gaps = 62/360 (17%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R ++ KE G IIGK G+ V LREE+G K +S +R++T+
Sbjct: 46 YAQTQLT-----LRALVSSKEAGVIIGKGGQNVANLREETGVKAGVSKVVQGVYDRVLTI 100
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQ 546
G D++ RA++++ + + E + +GG + ++L++ +Q G+IIG+ G +
Sbjct: 101 TGGCDAVSRAYAVVARALLEGAPAVS--MGGVVQHNGTHPIKLLISHNQMGTIIGRQGQR 158
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPY 605
IK I++ SG + +MLP STER V ++G P+ + +A+++IC +VD +G T+ Y
Sbjct: 159 IKYIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVFY 218
Query: 606 RP-LPQNAGGPGLIGNQFGMQNSLMG-APDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
P + GG +++G + G D N G + G +S GG
Sbjct: 219 NPAVRTQVGG---FHDRYGSRVLRTGNGADFSN----GSRSYGRRSDSEGG--------- 262
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 723
PR P+ N ++ Q T+ +++P +++G +IG
Sbjct: 263 --------------PRGP--------------PTHDENGEEIQ-TQNISIPADMVGCIIG 293
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
+GG+KI EIRK SGA I I+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 294 RGGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGTAKANETALFLLYENLEAEKMR 351
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 173/341 (50%), Gaps = 57/341 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LREE+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 60 KEAGVIIGKGGQNVANLREETGVKAGVSKVVQGVYDRVLTITGGCDAVSRAYAVVARALL 119
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + +GG + ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 120 EGAPAVS--MGGVVQHNGTHPIKLLISHNQMGTIIGRQGQRIKYIQDVSGVRMVAQKEML 177
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP-LPQNAGGPGLIGNQFG 178
P STER V ++G P+ + +A+++IC +VD +G T+ Y P + GG +++G
Sbjct: 178 PQSTERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVFYNPAVRTQVGG---FHDRYG 234
Query: 179 MQNSLMG-APDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+ G D N G + G +S GG PR
Sbjct: 235 SRVLRTGNGADFSN----GSRSYGRRSDSEGG-----------------------PRGP- 266
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
P+ N ++ Q T+ +++P +++G +IG+GG+KI EIRK SGA I I
Sbjct: 267 -------------PTHDENGEEIQ-TQNISIPADMVGCIIGRGGSKISEIRKTSGARISI 312
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 313 AKAPHDE--TGERMFTIMGTAKANETALFLLYENLEAEKMR 351
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 51/250 (20%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ + + +G +IG+ G +I I+ +SG +R+ E S +R + + GTP+ I A
Sbjct: 140 KLLISHNQMGTIIGRQGQRIKYIQDVSG--VRMVAQKEMLPQSTERIVEVQGTPEGIQRA 197
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
+ I + +DD+ G NP A Q+
Sbjct: 198 VWEICKCL----------------VDDWQRGT---------GTVFYNP--AVRTQVGGFH 230
Query: 385 TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGP-----NYANIQTTGVQ 439
+ G+ T G +D G S G +S G P+GP N IQT +
Sbjct: 231 DRYGSRVLRT-----GNGADFSNGSRSYGRRSDSEGG---PRGPPTHDENGEEIQTQNIS 282
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFR 496
+ VG IIG+ G + ++R+ SG++I I+ + T ER+ T++G+ +
Sbjct: 283 ------IPADMVGCIIGRGGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANET 336
Query: 497 AFSLITKNIE 506
A L+ +N+E
Sbjct: 337 ALFLLYENLE 346
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 231 HMPRNQNQNQNQHNRNNRDG-PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEI 287
HM N N+ R DG P+ KT+++ Q Q+T V ++ G +IGKGG + +
Sbjct: 22 HMHINDNEP-----RLGPDGEPAPKTDEEYAQTQLTLRALVSSKEAGVIIGKGGQNVANL 76
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
R+ +G +SK + DR +T+TG DA++ A ++
Sbjct: 77 REETGVKAGVSKVV---QGVYDRVLTITGGCDAVSRAYAVV 114
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 676 HMPRNQNQNQNQHNRNNRDG-PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEI 732
HM N N+ R DG P+ KT+++ Q Q+T V ++ G +IGKGG + +
Sbjct: 22 HMHINDNEP-----RLGPDGEPAPKTDEEYAQTQLTLRALVSSKEAGVIIGKGGQNVANL 76
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
R+ +G +SK + DR +T+TG DA++ A ++
Sbjct: 77 REETGVKAGVSKVV---QGVYDRVLTITGGCDAVSRAYAVV 114
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 60 IEEFHKNQNK-HLGGNGE-----------SQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
I H N N+ LG +GE +QL LR +V + + G IIGKGG + +RE
Sbjct: 20 IGHMHINDNEPRLGPDGEPAPKTDEEYAQTQLT-LRALVSSKEAGVIIGKGGQNVANLRE 78
Query: 108 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
+G V S ++ +R + I G DAV++A + +++ P
Sbjct: 79 ETGVKAGV-SKVVQGVYDRVLTITGGCDAVSRAYAVVARALLEGAP 123
>gi|453080702|gb|EMF08752.1| hypothetical protein SEPMUDRAFT_151698 [Mycosphaerella populorum
SO2202]
Length = 518
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 187/394 (47%), Gaps = 74/394 (18%)
Query: 425 PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPE 482
PQG + Q +R I+ E ++IGK GE V ++R+ +G+K +S+ + E
Sbjct: 137 PQGAQSYHQQDESQWLHVRAIISSAEAATVIGKGGENVSQIRKLAGAKCTVSEYTRGAVE 196
Query: 483 RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
R++TV G +D++ +AF LI + + + + +S+ LRL++P GSIIGK
Sbjct: 197 RVLTVSGQVDAVAKAFGLIIRTLNQEPLEEPS----TPQSKTYPLRLLIPHILIGSIIGK 252
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP----- 597
G +I+ I+E SGA + + LP STER + + GV DAV A Y + +V+
Sbjct: 253 QGVRIREIQEASGARLNASESCLPLSTERSLVVLGVADAVHIATYYVGSTLVEQLTDRFG 312
Query: 598 -PKGA------------------TIPYRPLPQNAGGPGLIGNQFGMQNS----------- 627
P + +PY +PQN GG Q G ++
Sbjct: 313 GPAASNYAGRHGGPQGVVPGGMQVVPY--VPQNTGG------QVGQPDNNRRHNGPPSRG 364
Query: 628 ---LMGAPDM-GNNPL----AGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR 679
GAP M G +P G G G G + A A+ Q H
Sbjct: 365 PPVPYGAPSMHGQSPYPQQPVAPVHYGAGSPRAPYAGAGPHQAHPYGHAAPQPGPGHAGP 424
Query: 680 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 739
Q Q GP Q IT+++ +PN+++GA+IGKGG KI EIR++SG++
Sbjct: 425 PQQPVQGV-------GPGQP-------ITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSV 470
Query: 740 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
I+I +E ++++N+R +T+TGT + +A Y++
Sbjct: 471 IKI---NEPQDNNNERLVTITGTQECNQMALYML 501
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 178/369 (48%), Gaps = 74/369 (20%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R+ +G+K +S+ + ER++TV G +D++ +AF LI + + +
Sbjct: 162 EAATVIGKGGENVSQIRKLAGAKCTVSEYTRGAVERVLTVSGQVDAVAKAFGLIIRTLNQ 221
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 222 EPLEEPS----TPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPL 277
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSP------PKGA------------------TI 158
STER + + GV DAV A Y + +V+ P + +
Sbjct: 278 STERSLVVLGVADAVHIATYYVGSTLVEQLTDRFGGPAASNYAGRHGGPQGVVPGGMQVV 337
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNS--------------LMGAPDM-GNNPL----AGLAA 199
PY +PQN GG Q G ++ GAP M G +P
Sbjct: 338 PY--VPQNTGG------QVGQPDNNRRHNGPPSRGPPVPYGAPSMHGQSPYPQQPVAPVH 389
Query: 200 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ 259
G G G G + A A+ Q H Q Q GP Q
Sbjct: 390 YGAGSPRAPYAGAGPHQAHPYGHAAPQPGPGHAGPPQQPVQGV-------GPGQP----- 437
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
IT+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E ++++N+R +T+TGT +
Sbjct: 438 --ITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNNNERLVTITGTQE 492
Query: 320 AIALAQYLI 328
+A Y++
Sbjct: 493 CNQMALYML 501
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 55/308 (17%)
Query: 247 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
N++ + + Q + +P+ LIG++IGK G +I EI++ SGA + S+S
Sbjct: 220 NQEPLEEPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPL-- 277
Query: 307 SNDRTITMTGTPDAIALAQYLINMS-VELLRANLNGE----------------------- 342
S +R++ + G DA+ +A Y + + VE L G
Sbjct: 278 STERSLVVLGVADAVHIATYYVGSTLVEQLTDRFGGPAASNYAGRHGGPQGVVPGGMQVV 337
Query: 343 -------GGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTS 395
GG D+ N PS P P+ P + P A
Sbjct: 338 PYVPQNTGGQVGQPDNNRRHNGPPSRGP--------PVPYGAPSMHGQSPYPQQPVAPVH 389
Query: 396 LSALGGLSDLLGGGSS-----GGGSGNSG-GFGGVPQGPNYANIQTTGVQRRMRH--IMQ 447
A + G G G + G G G PQ P +Q G + + +
Sbjct: 390 YGAGSPRAPYAGAGPHQAHPYGHAAPQPGPGHAGPPQQP----VQGVGPGQPITQQIFIP 445
Query: 448 GKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNI 505
VG+IIGK G + ++R+ SGS I I++ + ER+VT+ G+ + A ++ +
Sbjct: 446 NDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQMALYMLYSRL 505
Query: 506 EEFHKNQN 513
E KN N
Sbjct: 506 GESSKNSN 513
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ESQ + +R I+ +++ ++IGKGG + IR+ +GA V S+ + ER + + G D
Sbjct: 148 ESQWLHVRAIISSAEAATVIGKGGENVSQIRKLAGAKCTV-SEYTRGAVERVLTVSGQVD 206
Query: 136 AVTQAIYQICLIMVDSP------PKGATIPYR 161
AV +A I + P P+ T P R
Sbjct: 207 AVAKAFGLIIRTLNQEPLEEPSTPQSKTYPLR 238
>gi|451997944|gb|EMD90409.1| hypothetical protein COCHEDRAFT_1225891 [Cochliobolus
heterostrophus C5]
Length = 365
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 180/365 (49%), Gaps = 56/365 (15%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V LR+E+G + +S +R+++
Sbjct: 39 EYAEAQLT-----LRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLS 93
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
V GS+ + +A+ L K + E +GG + +RL++ +Q G+IIG+ G
Sbjct: 94 VTGSLSGISKAYGLAAKGLLEGAPAMG--MGGVIRTDGTHPIRLLISHNQMGTIIGRQGL 151
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIP 604
+IK I++ SG + +MLP STER V ++G P + +A+++I ++D +G T+
Sbjct: 152 KIKQIQDASGVRMVAQKEMLPQSTERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVL 211
Query: 605 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNS-GGGMGGGLNAAA 663
Y P ++ P +G P A GG++ GGMGGG
Sbjct: 212 YNP-------------------AVRVQPGVGPGPAAN------GGSAPAGGMGGG----- 241
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDG-----PSQKTNQQQNQITKEMTVPNELI 718
S +T H + R+ D P T + T+ +++P++++
Sbjct: 242 -----RSYNRTGHGADFSDSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMV 296
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMS 776
G +IG+GG+KI EIRK S A I I+K+ +D+ +R T+TG+ A A YL+ N+
Sbjct: 297 GCIIGRGGSKISEIRKTSNARISIAKAP--HDDTGERMFTITGSASANEKALYLLYENLE 354
Query: 777 VELLR 781
E +R
Sbjct: 355 AEKMR 359
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 172/345 (49%), Gaps = 51/345 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G + +S +R+++V GS+ + +A+ L K +
Sbjct: 54 KEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGISKAYGLAAKGLL 113
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG + +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 114 EGAPAMG--MGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEML 171
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P + +A+++I ++D +G T+ Y P
Sbjct: 172 PQSTERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNP----------------- 214
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNS-GGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
++ P +G P A GG++ GGMGGG S +T H +
Sbjct: 215 --AVRVQPGVGPGPAAN------GGSAPAGGMGGG----------RSYNRTGHGADFSDS 256
Query: 239 NQNQHNRNNRDG-----PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
R+ D P T + T+ +++P++++G +IG+GG+KI EIRK S A
Sbjct: 257 PPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNA 316
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I I+K+ +D+ +R T+TG+ A A YL+ N+ E +R
Sbjct: 317 RISIAKAP--HDDTGERMFTITGSASANEKALYLLYENLEAEKMR 359
>gi|336273542|ref|XP_003351525.1| hypothetical protein SMAC_00067 [Sordaria macrospora k-hell]
gi|380095805|emb|CCC05851.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 372
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 178/349 (51%), Gaps = 47/349 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ +A++
Sbjct: 52 LRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDAVSKAYA 111
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
+ +++ E + +GG NG L +L++ +Q G++IG+ G +IK I++ SG
Sbjct: 112 AVARSLLEGAPSVG--MGGVISANGTHPL---KLLISHNQMGTVIGRQGLKIKHIQDVSG 166
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + G
Sbjct: 167 VRMVAQKEMLPQSTERVVEVQGTPEGIERAVWEICKCLVDDWQRGTGTVLYNPVVRGPGA 226
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
P G + Q G+ + + G G + GG
Sbjct: 227 PVSGGERNYPQERSYGS--------SRVTRTGNGADFSSNSGG----------------- 261
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
R N+ + + +R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK
Sbjct: 262 ----RAYNRRSDS-DAASRGPPTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRK 315
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
SGA I I+K +E S +R T+ G+ A A YL+ N+ E R
Sbjct: 316 QSGARISIAKGPHDE--SGERMFTIMGSAKANETALYLLYENLEAEKTR 362
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 174/342 (50%), Gaps = 47/342 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ +A++ + +++
Sbjct: 59 KEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDAVSKAYAAVARSLL 118
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E + +GG NG L +L++ +Q G++IG+ G +IK I++ SG +
Sbjct: 119 EGAPSVG--MGGVISANGTHPL---KLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQK 173
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + G P G +
Sbjct: 174 EMLPQSTERVVEVQGTPEGIERAVWEICKCLVDDWQRGTGTVLYNPVVRGPGAPVSGGER 233
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
Q G+ + + G G + GG R
Sbjct: 234 NYPQERSYGS--------SRVTRTGNGADFSSNSGG---------------------RAY 264
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N+ + + +R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I
Sbjct: 265 NRRSDS-DAASRGPPTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKQSGARIS 322
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K +E S +R T+ G+ A A YL+ N+ E R
Sbjct: 323 IAKGPHDE--SGERMFTIMGSAKANETALYLLYENLEAEKTR 362
>gi|400593892|gb|EJP61786.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 373
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 179/360 (49%), Gaps = 41/360 (11%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 40 EYAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLT 94
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGG 544
+ G D++ RA++++ + + E L GNG + +L++ +Q G++IG+ G
Sbjct: 95 ITGGCDAISRAYAIVARALLEGAPAMGMGGILQGNGTHPI---KLLISHNQMGTVIGRQG 151
Query: 545 SQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TI 603
+IK I++ SG + +MLP STER V ++G P+ + +A+++IC +VD +G T+
Sbjct: 152 LKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRALWEICKCLVDDWQRGTGTV 211
Query: 604 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
Y P+ + PG GA G + + G S GGG
Sbjct: 212 LYNPVVRTQ--PGT--TGGTGSTGSFGATGNGRAEYSSPRVMRTGNGSDFSNGGG----- 262
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 723
T R + + +R P+ N ++ Q T+ +++P +++G +IG
Sbjct: 263 ---------GTRPFSRRSDSDA-----ASRGPPTHDENGEEIQ-TQNISIPADMVGCIIG 307
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
+ G+KI EIRK SGA I I+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 308 RAGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 365
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 171/340 (50%), Gaps = 36/340 (10%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 55 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRAYAIVARALL 114
Query: 62 EFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
E L GNG + +L++ +Q G++IG+ G +IK I++ SG + +M
Sbjct: 115 EGAPAMGMGGILQGNGTHPI---KLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEM 171
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFG 178
LP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + PG
Sbjct: 172 LPQSTERIVEVQGTPEGIQRALWEICKCLVDDWQRGTGTVLYNPVVRTQ--PGT--TGGT 227
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
GA G + + G S GGG T R +
Sbjct: 228 GSTGSFGATGNGRAEYSSPRVMRTGNGSDFSNGGG--------------GTRPFSRRSDS 273
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
+ +R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I I+
Sbjct: 274 DA-----ASRGPPTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGARISIA 327
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 328 KAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 365
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 251 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 33 PAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 89
Query: 309 DRTITMTGTPDAIALAQYLI 328
DR +T+TG DAI+ A ++
Sbjct: 90 DRVLTITGGCDAISRAYAIV 109
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 696 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 33 PAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 89
Query: 754 DRTITMTGTPDAIALAQYLI 773
DR +T+TG DAI+ A ++
Sbjct: 90 DRVLTITGGCDAISRAYAIV 109
>gi|310792993|gb|EFQ28454.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 384
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 181/359 (50%), Gaps = 29/359 (8%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V LR+E+G K +S +R++T
Sbjct: 41 EYAMAQLT-----LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLT 95
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
+ G S+ A++++ K + E + +GG ++ ++L++ +Q G+IIG+ G
Sbjct: 96 ITGGCQSVAEAYAIVAKALLEGAPSMG--MGGVVQNNGTHPIKLLISHNQMGTIIGRQGL 153
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + +MLP STER V ++G P+ + AI++IC +VD +G T+
Sbjct: 154 KIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIKGAIWEICKCLVDDWQRGTGTVL 213
Query: 605 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
Y P+ + G S G+ N G + G G + +A
Sbjct: 214 YNPVVRTQPG----------TTSTAGSGSTPNYSSGGGRSSDYSAPRVMRTGNGADFSAS 263
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
++ P + + + +R P+ N ++ Q T+ +++P +++G +IG+
Sbjct: 264 NTNNNNNNGGGGRPYGRRSDSDAASRGP---PTHDENGEELQ-TQNISIPADMVGCIIGR 319
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
G+KI EIRK SGA I I+K+ +D+ +R T+ GT A A +L+ N+ E +R
Sbjct: 320 AGSKISEIRKTSGARISIAKAP--HDDTGERMFTIMGTAKANESALFLLYENLEAEKMR 376
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 173/339 (51%), Gaps = 24/339 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++T+ G S+ A++++ K +
Sbjct: 56 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCQSVAEAYAIVAKALL 115
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + +GG ++ ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 116 EGAPSMG--MGGVVQNNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEML 173
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P+ + AI++IC +VD +G T+ Y P+ + G
Sbjct: 174 PQSTERIVEVQGTPEGIKGAIWEICKCLVDDWQRGTGTVLYNPVVRTQPG---------- 223
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
S G+ N G + G G + +A ++ P + +
Sbjct: 224 TTSTAGSGSTPNYSSGGGRSSDYSAPRVMRTGNGADFSASNTNNNNNNGGGGRPYGRRSD 283
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ +R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I I+K
Sbjct: 284 SDAASRGP---PTHDENGEELQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAK 339
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+ +D+ +R T+ GT A A +L+ N+ E +R
Sbjct: 340 AP--HDDTGERMFTIMGTAKANESALFLLYENLEAEKMR 376
>gi|389751124|gb|EIM92197.1| hypothetical protein STEHIDRAFT_89021 [Stereum hirsutum FP-91666
SS1]
Length = 339
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 172/340 (50%), Gaps = 52/340 (15%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V LR+++G K +S ER++TV G++DS+ +A++
Sbjct: 31 LRALVSTKDAGVIIGKAGKNVADLRDQTGVKAGVSKVIPGVHERVLTVTGAVDSVAKAYA 90
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + E N + +RL++ + G+IIG+ G +IK I++ SGA +
Sbjct: 91 LIIAQLVE--ANPASPSVSSSSGSHTSIRLLISHNLMGTIIGRNGLKIKAIQDGSGARMV 148
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLI 618
+ DMLP STER V+++G P+++ +AI +I +++ +G T+ Y P
Sbjct: 149 ASKDMLPQSTERVVDVQGSPESIGRAIEEIGRCLLEDWERGLGTVLYHP----------- 197
Query: 619 GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP 678
G D SGG MGG A + ++
Sbjct: 198 -----------GVADE---------------RSGGSMGG-------AGRRAHNYSGSYSG 224
Query: 679 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 738
R N + R + +Q N T+ +++P++++G +IG+GGTKI EIR++SG+
Sbjct: 225 RRSNAGE-MSTRATSPPSPESPSQAANLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGS 283
Query: 739 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
I I+K+ +E + +R T+ GTP+A A +L+ +E
Sbjct: 284 KISIAKAPHDE--TGERMFTIVGTPEANEKALFLLYNQLE 321
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 168/333 (50%), Gaps = 52/333 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V LR+++G K +S ER++TV G++DS+ +A++LI +
Sbjct: 38 KDAGVIIGKAGKNVADLRDQTGVKAGVSKVIPGVHERVLTVTGAVDSVAKAYALIIAQLV 97
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E N + +RL++ + G+IIG+ G +IK I++ SGA + + DMLP
Sbjct: 98 E--ANPASPSVSSSSGSHTSIRLLISHNLMGTIIGRNGLKIKAIQDGSGARMVASKDMLP 155
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGMQ 180
STER V+++G P+++ +AI +I +++ +G T+ Y P
Sbjct: 156 QSTERVVDVQGSPESIGRAIEEIGRCLLEDWERGLGTVLYHP------------------ 197
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
G D SGG MGG A + ++ R N +
Sbjct: 198 ----GVADE---------------RSGGSMGG-------AGRRAHNYSGSYSGRRSNAGE 231
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
R + +Q N T+ +++P++++G +IG+GGTKI EIR++SG+ I I+K+
Sbjct: 232 -MSTRATSPPSPESPSQAANLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKA 290
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+E + +R T+ GTP+A A +L+ +E
Sbjct: 291 PHDE--TGERMFTIVGTPEANEKALFLLYNQLE 321
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
++ LR +V G IIGK G + +R+ +G V S ++P ER + + G D+V
Sbjct: 28 VLTLRALVSTKDAGVIIGKAGKNVADLRDQTGVKAGV-SKVIPGVHERVLTVTGAVDSVA 86
Query: 139 QAIYQICLIMVDSPP 153
+A I +V++ P
Sbjct: 87 KAYALIIAQLVEANP 101
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
++ LR +V G IIGK G + +R+ +G V S ++P ER + + G D+V
Sbjct: 28 VLTLRALVSTKDAGVIIGKAGKNVADLRDQTGVKAGV-SKVIPGVHERVLTVTGAVDSVA 86
Query: 584 QAIYQICLIMVDSPP 598
+A I +V++ P
Sbjct: 87 KAYALIIAQLVEANP 101
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 129/319 (40%), Gaps = 65/319 (20%)
Query: 247 NRDGPSQKTNQQ-----QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSS 301
NRD S ++ Q+ +T V + G +IGK G + ++R +G +SK
Sbjct: 9 NRDSASPHQSRSPSPAGQDVLTLRALVSTKDAGVIIGKAGKNVADLRDQTGVKAGVSKVI 68
Query: 302 EEEEDSNDRTITMTGTPDAIALAQYLINMS-VE--------------------LLRANLN 340
++R +T+TG D++A A LI VE L+ NL
Sbjct: 69 P---GVHERVLTVTGAVDSVAKAYALIIAQLVEANPASPSVSSSSGSHTSIRLLISHNLM 125
Query: 341 G-------------EGGGESNMDDFSSDNNLPSSAPLAGLNASNP--LAAALPQLAQILT 385
G + G + M +S + LP S +P + A+ ++ + L
Sbjct: 126 GTIIGRNGLKIKAIQDGSGARM--VASKDMLPQSTERVVDVQGSPESIGRAIEEIGRCLL 183
Query: 386 KPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQG--PNYANIQTTGVQR--- 440
+ L ++ G++D GGS GG + + G G N + T
Sbjct: 184 EDWE-RGLGTVLYHPGVADERSGGSMGGAGRRAHNYSGSYSGRRSNAGEMSTRATSPPSP 242
Query: 441 ---------RMRHI-MQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTV 487
R ++I + VG IIG+ G + ++R SGSKI I+ + T ER+ T+
Sbjct: 243 ESPSQAANLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKAPHDETGERMFTI 302
Query: 488 IGSMDSLFRAFSLITKNIE 506
+G+ ++ +A L+ +E
Sbjct: 303 VGTPEANEKALFLLYNQLE 321
>gi|296825084|ref|XP_002850758.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
gi|238838312|gb|EEQ27974.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
Length = 367
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 178/354 (50%), Gaps = 57/354 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYS 109
Query: 500 LITKNIEEFHKNQNKHLGGNGESQ---LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
++ K++ E +G G Q +RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 110 IVAKSLLEGAP----QMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGV 165
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNA--G 613
+ +MLP STER V ++G P+ + +AI++I ++D +G T+ Y P + +
Sbjct: 166 RMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRASVGS 225
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
GPG A G+NP GGNS S +
Sbjct: 226 GPGQ-------------ASAAGSNP-------SYGGNS-----------------RSYNR 248
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
T + + + R N D P++ T + T+ +++P++++G +IG+GGTKI
Sbjct: 249 TGNGADFSDHPGSYGRRGNNDNPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKI 308
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
EIR+ SGA I I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 309 SEIRRSSGARISIAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 360
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 174/347 (50%), Gaps = 57/347 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S++ K++
Sbjct: 57 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYSIVAKSLL 116
Query: 62 EFHKNQNKHLGGNGESQ---LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
E +G G Q +RL++ +Q G+IIG+ G +IK I++ SG + +
Sbjct: 117 EGAP----QMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKE 172
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNA--GGPGLIGN 175
MLP STER V ++G P+ + +AI++I ++D +G T+ Y P + + GPG
Sbjct: 173 MLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRASVGSGPGQ--- 229
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
A G+NP GGNS S +T +
Sbjct: 230 ----------ASAAGSNP-------SYGGNS-----------------RSYNRTGNGADF 255
Query: 236 QNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
+ + R N D P++ T + T+ +++P++++G +IG+GGTKI EIR+ S
Sbjct: 256 SDHPGSYGRRGNNDNPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSS 315
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
GA I I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 316 GARISIAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 360
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 182/362 (50%), Gaps = 54/362 (14%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V LR+++G + +S +R++T
Sbjct: 35 EYAQSQLT-----LRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLT 89
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGS 545
V G++ + A+ L+ ++ + +GG G +RL++ +Q G+IIG+ G
Sbjct: 90 VTGALTGISDAYGLVADSLVKGVPQMG--MGGVVGNPNTHPIRLLISHNQMGTIIGRQGL 147
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIP 604
+IK I++ SG + +MLP STER V ++G P+ V +A+++I ++D +G T+
Sbjct: 148 KIKQIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGVQKAVWEIGKCLIDDEQRGYGTVL 207
Query: 605 YRPLPQNAGG---PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNA 661
Y P + GG P L G + GAP N G G + GG
Sbjct: 208 YSPAVRVQGGAPAPPLNGT-----GASYGAPRSYNR-------TGNGADFTGG------- 248
Query: 662 AALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAV 721
Q +++ PR N + GP + ++ T+ +++P +++G +
Sbjct: 249 ---------QSPSSYPPR--------RNGPSDGGPPPRPEDGEDIQTQNISIPADMVGCI 291
Query: 722 IGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVEL 779
IG+GG+KI EIRK SGA I I+K+ +E + +R T+TG P A A YL+ N+ E
Sbjct: 292 IGRGGSKISEIRKSSGARISIAKAPHDE--TGERMFTITGGPAANEKALYLLYENLEAEK 349
Query: 780 LR 781
+R
Sbjct: 350 MR 351
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 174/342 (50%), Gaps = 49/342 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+++G + +S +R++TV G++ + A+ L+ ++
Sbjct: 50 KEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGALTGISDAYGLVADSLV 109
Query: 62 EFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+ +GG G +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 110 KGVPQMG--MGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEML 167
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGG---PGLIGNQ 176
P STER V ++G P+ V +A+++I ++D +G T+ Y P + GG P L G
Sbjct: 168 PQSTERIVEVQGTPEGVQKAVWEIGKCLIDDEQRGYGTVLYSPAVRVQGGAPAPPLNGT- 226
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+ GAP N G G + GG Q +++ PR
Sbjct: 227 ----GASYGAPRSYNR-------TGNGADFTGG----------------QSPSSYPPR-- 257
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + GP + ++ T+ +++P +++G +IG+GG+KI EIRK SGA I
Sbjct: 258 ------RNGPSDGGPPPRPEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARIS 311
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K+ +E + +R T+TG P A A YL+ N+ E +R
Sbjct: 312 IAKAPHDE--TGERMFTITGGPAANEKALYLLYENLEAEKMR 351
>gi|451847129|gb|EMD60437.1| hypothetical protein COCSADRAFT_99089 [Cochliobolus sativus ND90Pr]
Length = 364
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 179/365 (49%), Gaps = 57/365 (15%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V LR+E+G + +S +R+++
Sbjct: 39 EYAEAQLT-----LRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLS 93
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
V GS+ + +A+ L K + E +GG + +RL++ +Q G+IIG+ G
Sbjct: 94 VTGSLSGISKAYGLAAKGLLEGAPAMG--MGGVIRTDGTHPIRLLISHNQMGTIIGRQGL 151
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIP 604
+IK I++ SG + +MLP STER V ++G P + +A+++I ++D +G T+
Sbjct: 152 KIKQIQDASGVRMVAQKEMLPQSTERVVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVL 211
Query: 605 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNS-GGGMGGGLNAAA 663
Y P ++ P +G P A GG++ GGMGG
Sbjct: 212 YNP-------------------AVRVQPGVGPGPAAN------GGSAPAGGMGG------ 240
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDG-----PSQKTNQQQNQITKEMTVPNELI 718
S +T H + R+ D P T + T+ +++P++++
Sbjct: 241 -----RSYNRTGHGADFSDSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMV 295
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMS 776
G +IG+GG+KI EIRK S A I I+K+ +D+ +R T+TG+ A A YL+ N+
Sbjct: 296 GCIIGRGGSKISEIRKTSNARISIAKAP--HDDTGERMFTITGSASANEKALYLLYENLE 353
Query: 777 VELLR 781
E +R
Sbjct: 354 AEKMR 358
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 171/345 (49%), Gaps = 52/345 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G + +S +R+++V GS+ + +A+ L K +
Sbjct: 54 KEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGISKAYGLAAKGLL 113
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG + +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 114 EGAPAMG--MGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEML 171
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P + +A+++I ++D +G T+ Y P
Sbjct: 172 PQSTERVVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNP----------------- 214
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNS-GGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
++ P +G P A GG++ GGMGG S +T H +
Sbjct: 215 --AVRVQPGVGPGPAAN------GGSAPAGGMGG-----------RSYNRTGHGADFSDS 255
Query: 239 NQNQHNRNNRDG-----PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
R+ D P T + T+ +++P++++G +IG+GG+KI EIRK S A
Sbjct: 256 PPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNA 315
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I I+K+ +D+ +R T+TG+ A A YL+ N+ E +R
Sbjct: 316 RISIAKAP--HDDTGERMFTITGSASANEKALYLLYENLEAEKMR 358
>gi|189194345|ref|XP_001933511.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979075|gb|EDU45701.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 434
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 168/338 (49%), Gaps = 41/338 (12%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF
Sbjct: 127 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAF 186
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + + ++ S+ +RL++P GSIIGK G +I+ I+E S A +
Sbjct: 187 GLIVRTLNQ----EDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKL 242
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI 618
+ +LPNS ER + + GV DAV A+Y + +V+ L + GGP
Sbjct: 243 NASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVEQ-----------LTERFGGPA-- 289
Query: 619 GNQFGMQNSLMG--AP-DMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
+Q+ ++ + P M P A G G S G GG A + +
Sbjct: 290 ASQYATRSGMAANVVPGGMSVQPYVPQPA-GAGSPSRGPYGG--------PAAPTPYGAH 340
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
+ P Q QQ + +PN+++GA+IGKGG KI EIR++
Sbjct: 341 PAAAPVAHGGAAPHAAVGAMPGQPLTQQ-------IFIPNDMVGAIIGKGGAKINEIRQL 393
Query: 736 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
SG++I+I +E ++SN+R +T+TGT + +A Y++
Sbjct: 394 SGSVIKI---NEPTDNSNERLVTITGTQECNQMALYML 428
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 165/329 (50%), Gaps = 41/329 (12%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF LI + + +
Sbjct: 136 EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFGLIVRTLNQ 195
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ S+ +RL++P GSIIGK G +I+ I+E S A + + +LPN
Sbjct: 196 ----EDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLPN 251
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNS 182
S ER + + GV DAV A+Y + +V+ L + GGP +Q+ ++
Sbjct: 252 SGERSLIVLGVADAVHIAVYYVAQTLVEQ-----------LTERFGGPA--ASQYATRSG 298
Query: 183 LMG--AP-DMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ P M P A G G S G GG A + +
Sbjct: 299 MAANVVPGGMSVQPYVPQPA-GAGSPSRGPYGG--------PAAPTPYGAHPAAAPVAHG 349
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P Q QQ + +PN+++GA+IGKGG KI EIR++SG++I+I
Sbjct: 350 GAAPHAAVGAMPGQPLTQQ-------IFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-- 400
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+E ++SN+R +T+TGT + +A Y++
Sbjct: 401 -NEPTDNSNERLVTITGTQECNQMALYML 428
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
NQN+ + E+ + +R + S+ +IIGKGG + IR SGA V SD + E
Sbjct: 115 NQNQQVD---ETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTV-SDYSRGAVE 170
Query: 126 REVNIKGVPDAVTQAI 141
R + + G DAV++A
Sbjct: 171 RILTVSGQVDAVSKAF 186
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N+ + + PS T++ + +P+ LIG++IGK G +I EI++ S A +++ S
Sbjct: 194 NQEDLETPSTSTSKA---YPMRLLIPHILIGSIIGKAGVRIREIQEASNA--KLNASDTL 248
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
+S +R++ + G DA+ +A Y + + VE L G
Sbjct: 249 LPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGG 287
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N+ + + PS T++ + +P+ LIG++IGK G +I EI++ S A +++ S
Sbjct: 194 NQEDLETPSTSTSKA---YPMRLLIPHILIGSIIGKAGVRIREIQEASNA--KLNASDTL 248
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
+S +R++ + G DA+ +A Y + + VE L G
Sbjct: 249 LPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGG 287
>gi|312085525|ref|XP_003144713.1| hypothetical protein LOAG_09137 [Loa loa]
Length = 327
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 170/340 (50%), Gaps = 71/340 (20%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ + G+IIGK GE+VK ++ E + + + DS TPER+V ++ +++++ R +I
Sbjct: 42 LRLLVTSRGAGAIIGKKGESVKNIQAECDATVSVPDSQTPERVVQLVATVENVVRCVEMI 101
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
I+E H NQ++ +L+++V S G++IG+GGS+IK +RE +G + V
Sbjct: 102 IARIDEVHDNQDRDS---------ELKVLVHQSHAGAVIGRGGSRIKELREENGVDLKVY 152
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
S+ P STER + I G P+ + + I + + P KG + PY + + ++ N+
Sbjct: 153 SECCPQSTERIIQINGKPEKIVACLVTIISTLKEIPIKGPSRPYESIFFDP----VVANE 208
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG-GMGGGLNAAALAALASSQLKTNHMPRN 680
+G G G+ GG GM G + PR+
Sbjct: 209 YG----------------------GYAGDHGGRGMRG------------------YGPRS 228
Query: 681 Q--NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 738
+ DGP + T ++TVPNEL G +IG+GG +I IR SGA
Sbjct: 229 RIPLPPYGPVPPAYDDGPLE---------TAQVTVPNELGGTIIGRGGERIRRIRDESGA 279
Query: 739 MIRISKSSEEEEDSN-DRTITMTGTPDAIALAQYLINMSV 777
I+I EEED N +R IT++GTP I +AQ+L+ V
Sbjct: 280 HIKI-----EEEDPNGERIITISGTPSQIEMAQFLLQQCV 314
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 165/330 (50%), Gaps = 71/330 (21%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G+IIGK GE+VK ++ E + + + DS TPER+V ++ +++++ R +I I+E H N
Sbjct: 52 GAIIGKKGESVKNIQAECDATVSVPDSQTPERVVQLVATVENVVRCVEMIIARIDEVHDN 111
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
Q++ +L+++V S G++IG+GGS+IK +RE +G + V S+ P STER
Sbjct: 112 QDRDS---------ELKVLVHQSHAGAVIGRGGSRIKELREENGVDLKVYSECCPQSTER 162
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
+ I G P+ + + I + + P KG + PY + + ++ N++G
Sbjct: 163 IIQINGKPEKIVACLVTIISTLKEIPIKGPSRPYESIFFDP----VVANEYG-------- 210
Query: 187 PDMGNNPLAGLAALGLGGNSGG-GMGGGLNAAALAALASSQLKTNHMPRNQ--NQNQNQH 243
G G+ GG GM G + PR++
Sbjct: 211 --------------GYAGDHGGRGMRG------------------YGPRSRIPLPPYGPV 238
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
DGP + T ++TVPNEL G +IG+GG +I IR SGA I+I E
Sbjct: 239 PPAYDDGPLE---------TAQVTVPNELGGTIIGRGGERIRRIRDESGAHIKI-----E 284
Query: 304 EEDSN-DRTITMTGTPDAIALAQYLINMSV 332
EED N +R IT++GTP I +AQ+L+ V
Sbjct: 285 EEDPNGERIITISGTPSQIEMAQFLLQQCV 314
>gi|195348691|ref|XP_002040881.1| GM22416 [Drosophila sechellia]
gi|194122391|gb|EDW44434.1| GM22416 [Drosophila sechellia]
Length = 302
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 150/291 (51%), Gaps = 56/291 (19%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 137 V-------TQAIYQICLIMV----DSPPKGAT-IPYR--------------PLPQNA-GG 169
+ T+ ++C+ + D G T IP R P PQ
Sbjct: 78 IFSAFTLITKKFEEVCVRVCSQFNDVGKVGKTQIPIRLIVPGQSMWNCLMAPEPQRRRCT 137
Query: 170 PGLI-GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
P LI N F L + NPLA LAALGL G + GG + AALAALA SQL+
Sbjct: 138 PNLIQSNPFRTFVPL--CEQVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLR 195
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
T + P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR
Sbjct: 196 TAN-------------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIR 232
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
+ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 233 QISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 283
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 150/291 (51%), Gaps = 56/291 (19%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S + +RLI+ + GSIIGK G + RE SGA + ++ P ER V + G +A
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNA 77
Query: 582 V-------TQAIYQICLIMV----DSPPKGAT-IPYR--------------PLPQNA-GG 614
+ T+ ++C+ + D G T IP R P PQ
Sbjct: 78 IFSAFTLITKKFEEVCVRVCSQFNDVGKVGKTQIPIRLIVPGQSMWNCLMAPEPQRRRCT 137
Query: 615 PGLI-GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
P LI N F L + NPLA LAALGL G + GG + AALAALA SQL+
Sbjct: 138 PNLIQSNPFRTFVPL--CEQVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLR 195
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
T + P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR
Sbjct: 196 TAN-------------------PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIR 232
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
+ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM + + A L
Sbjct: 233 QISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISMETAGL 283
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 68/94 (72%), Gaps = 4/94 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R IMQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LI
Sbjct: 26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLI 85
Query: 502 TKNIEEFH---KNQNKHLGGNGESQLIQLRLIVP 532
TK EE +Q +G G++Q I +RLIVP
Sbjct: 86 TKKFEEVCVRVCSQFNDVGKVGKTQ-IPIRLIVP 118
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 65/90 (72%), Gaps = 4/90 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
MQGKEVGSIIGK GE V + REESG+KI ISD S PERIVTV G+ +++F AF+LITK
Sbjct: 30 MQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLITKKF 89
Query: 61 EEFH---KNQNKHLGGNGESQLIQLRLIVP 87
EE +Q +G G++Q I +RLIVP
Sbjct: 90 EEVCVRVCSQFNDVGKVGKTQ-IPIRLIVP 118
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 110/278 (39%), Gaps = 35/278 (12%)
Query: 250 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 309
G S K +T + + + +G++IGK G + R+ SGA I IS S E
Sbjct: 12 GASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPE----- 66
Query: 310 RTITMTGTPDAIALAQYLINMSVE--LLRANLNGEGGGESNMDDF---------SSDNNL 358
R +T++GT +AI A LI E +R G+ S N L
Sbjct: 67 RIVTVSGTTNAIFSAFTLITKKFEEVCVRVCSQFNDVGKVGKTQIPIRLIVPGQSMWNCL 126
Query: 359 PSSAP-----LAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGG 413
+ P L SNP +P Q+ P A A L+ + +S G
Sbjct: 127 MAPEPQRRRCTPNLIQSNPFRTFVPLCEQVAKNPLASLAALGLAGM--------NPASTG 178
Query: 414 GSGNSGGFGGVP-QGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSK 472
G ++ + AN Q++ + +G IIGK G + ++R+ SG+
Sbjct: 179 GINHTAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAM 238
Query: 473 IYISDSSTPE-----RIVTVIGSMDSLFRAFSLITKNI 505
I IS+ E R +T+ G+ DS+ A LI I
Sbjct: 239 IRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRI 276
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 75/194 (38%), Gaps = 33/194 (17%)
Query: 695 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 754
G S K +T + + + +G++IGK G + R+ SGA I IS S E
Sbjct: 12 GASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPE----- 66
Query: 755 RTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSS--DNNLPSSAPLAGL 812
R +T++GT +AI A LI E + + S +D +P + G
Sbjct: 67 RIVTVSGTTNAIFSAFTLITKKFEEVCVRVC------SQFNDVGKVGKTQIPIRLIVPGQ 120
Query: 813 NASNPLAAALPQLAQILTKPAGLNASNPLAAALPQLAQILTKP----------------- 855
+ N L A PQ + L SNP +P Q+ P
Sbjct: 121 SMWNCLMAPEPQRRRCT---PNLIQSNPFRTFVPLCEQVAKNPLASLAALGLAGMNPAST 177
Query: 856 GALNALTSLSALGG 869
G +N +L+AL G
Sbjct: 178 GGINHTAALAALAG 191
>gi|403174064|ref|XP_003333074.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375170814|gb|EFP88655.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 365
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 183/361 (50%), Gaps = 58/361 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ KE G IIGK G+TV ++RE++G+K +S + +RI +V G ++ + +A++
Sbjct: 23 LRALVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRIFSVSGGLEGVSKAYA 82
Query: 500 LITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
++ + I + + +R++V + GSIIG+ GS+IK I++TSG
Sbjct: 83 IVAEAILQNPLAATDPALTVPPPTATTTIIRVLVSHNLMGSIIGRQGSKIKEIQDTSGVR 142
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLPQNAGGP 615
+ + +MLP STER V ++G PDA+ AI++I CL M D T+ Y+P A GP
Sbjct: 143 MVASKEMLPQSTERVVEVQGAPDAIRVAIHEIGKCL-MDDWERAHGTVLYQPGALGAEGP 201
Query: 616 G------------LIGNQFGMQNSLMGAPDMGN---NPLAGLAALGLGGNSGGGMGGGLN 660
NQ G N + +GN NPL SGG
Sbjct: 202 SAAYPGGVLAGGFGGANQ-GFSNGRRSSAPLGNANGNPL-----------SGG------- 242
Query: 661 AAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG---PSQKTNQQQNQITKEMTVPNEL 717
A AS+ TN +N +R G P T+Q T+ +++P+++
Sbjct: 243 ----ARRASNYNSTNI------ENPPHRSREGSLGASLPPASTDQVLR--TQNISIPSDM 290
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+G +IGKGG KI EIR++SG+ I I+K+ +E S +R T+ G+P+A A +L+ +
Sbjct: 291 VGCIIGKGGAKINEIRRLSGSKISIAKTPHDE--SGERMFTIIGSPEANEKALFLLYNQL 348
Query: 778 E 778
E
Sbjct: 349 E 349
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 179/354 (50%), Gaps = 58/354 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+TV ++RE++G+K +S + +RI +V G ++ + +A++++ + I
Sbjct: 30 KEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRIFSVSGGLEGVSKAYAIVAEAIL 89
Query: 62 E--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
+ + +R++V + GSIIG+ GS+IK I++TSG + + +M
Sbjct: 90 QNPLAATDPALTVPPPTATTTIIRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEM 149
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLPQNAGGPG------ 171
LP STER V ++G PDA+ AI++I CL M D T+ Y+P A GP
Sbjct: 150 LPQSTERVVEVQGAPDAIRVAIHEIGKCL-MDDWERAHGTVLYQPGALGAEGPSAAYPGG 208
Query: 172 ------LIGNQFGMQNSLMGAPDMGN---NPLAGLAALGLGGNSGGGMGGGLNAAALAAL 222
NQ G N + +GN NPL SGG A
Sbjct: 209 VLAGGFGGANQ-GFSNGRRSSAPLGNANGNPL-----------SGG-----------ARR 245
Query: 223 ASSQLKTNHMPRNQNQNQNQHNRNNRDG---PSQKTNQQQNQITKEMTVPNELIGAVIGK 279
AS+ TN +N +R G P T+Q T+ +++P++++G +IGK
Sbjct: 246 ASNYNSTNI------ENPPHRSREGSLGASLPPASTDQVLR--TQNISIPSDMVGCIIGK 297
Query: 280 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
GG KI EIR++SG+ I I+K+ +E S +R T+ G+P+A A +L+ +E
Sbjct: 298 GGAKINEIRRLSGSKISIAKTPHDE--SGERMFTIIGSPEANEKALFLLYNQLE 349
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 35/256 (13%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ V + L+G++IG+ G+KI EI+ SG +R+ S E S +R + + G PDAI +A
Sbjct: 114 VLVSHNLMGSIIGRQGSKIKEIQDTSG--VRMVASKEMLPQSTERVVEVQGAPDAIRVAI 171
Query: 326 YLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILT 385
+ I G+ MDD+ + P A L A P +AA P
Sbjct: 172 HEI----------------GKCLMDDWERAHGTVLYQPGA-LGAEGP-SAAYPGGVLAGG 213
Query: 386 KP----GALNALTSLSALGGLS-DLLGGGSSGGGSGNSGGFGGVPQ-------GPNYANI 433
G N S + LG + + L GG+ + NS P G +
Sbjct: 214 FGGANQGFSNGRRSSAPLGNANGNPLSGGARRASNYNSTNIENPPHRSREGSLGASLPPA 273
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGS 490
T V R + VG IIGK G + ++R SGSKI I+ + + ER+ T+IGS
Sbjct: 274 STDQVLRTQNISIPSDMVGCIIGKGGAKINEIRRLSGSKISIAKTPHDESGERMFTIIGS 333
Query: 491 MDSLFRAFSLITKNIE 506
++ +A L+ +E
Sbjct: 334 PEANEKALFLLYNQLE 349
>gi|189188542|ref|XP_001930610.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972216|gb|EDU39715.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 364
Score = 132 bits (333), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 178/367 (48%), Gaps = 61/367 (16%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V LR+E+G + +S +R+++
Sbjct: 39 EYAESQLT-----LRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLS 93
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
V GS+ + +A+ L K + E +GG + +RL++ +Q G+IIG+ G
Sbjct: 94 VTGSLSGISKAYGLAAKGLLEGAPAMG--MGGVIRTDGTHPIRLLISHNQMGTIIGRQGL 151
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIP 604
+IK I++ SG + +MLP STER V ++G P + +A+++I ++D +G T+
Sbjct: 152 KIKQIQDASGVRMVAQKEMLPQSTERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVL 211
Query: 605 YRPLP--QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNS-GGGMGGGLNA 661
Y P+ Q GPG + N GG++ G MGG
Sbjct: 212 YNPVVRVQPGAGPGPLSN---------------------------GGSAPSGSMGG---- 240
Query: 662 AALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG-----PSQKTNQQQNQITKEMTVPNE 716
S +T H + R+ D P T + T+ +++P++
Sbjct: 241 -------RSYNRTGHGADFSDSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSD 293
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--N 774
++G +IG+GGTKI EIRK S A I I+K+ +D+ +R T+TG+ A A YL+ N
Sbjct: 294 MVGCIIGRGGTKISEIRKTSNARISIAKAP--HDDTGERMFTITGSASANEKALYLLYEN 351
Query: 775 MSVELLR 781
+ E +R
Sbjct: 352 LEAEKMR 358
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 170/347 (48%), Gaps = 56/347 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G + +S +R+++V GS+ + +A+ L K +
Sbjct: 54 KEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGISKAYGLAAKGLL 113
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG + +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 114 EGAPAMG--MGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEML 171
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLP--QNAGGPGLIGNQF 177
P STER V ++G P + +A+++I ++D +G T+ Y P+ Q GPG + N
Sbjct: 172 PQSTERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPVVRVQPGAGPGPLSN-- 229
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNS-GGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
GG++ G MGG S +T H
Sbjct: 230 -------------------------GGSAPSGSMGG-----------RSYNRTGHGADFS 253
Query: 237 NQNQNQHNRNNRDG-----PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
+ R+ D P T + T+ +++P++++G +IG+GGTKI EIRK S
Sbjct: 254 DSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGTKISEIRKTS 313
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
A I I+K+ +D+ +R T+TG+ A A YL+ N+ E +R
Sbjct: 314 NARISIAKAP--HDDTGERMFTITGSASANEKALYLLYENLEAEKMR 358
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 132 bits (333), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 176/344 (51%), Gaps = 48/344 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G++ RA++
Sbjct: 229 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGALSGTARAYA 288
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
L+ K + E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 289 LVAKGLLEGAPQMG--MGGIVSNNGTHPI---RLLISHNQMGTIIGRQGLKIKHIQDASG 343
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +AI++I ++D +G TI Y P +++ G
Sbjct: 344 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTILYNPAVRSSVG 403
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G I + G +S P A + + GG G
Sbjct: 404 SGSIQHNGGNSDSYNSRPYNRTGNGADFS------DQSGGYG------------------ 439
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
R N + +NR P + ++ Q T+ +++P +++G +IG+GGTKI EIR+
Sbjct: 440 ----RRSNPDT-----SNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRGGTKITEIRR 489
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
SGA I I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 490 SSGARISIAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 531
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 172/337 (51%), Gaps = 48/337 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G++ RA++L+ K +
Sbjct: 236 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGALSGTARAYALVAKGLL 295
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 296 EGAPQMG--MGGIVSNNGTHPI---RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQK 350
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +AI++I ++D +G TI Y P +++ G G I +
Sbjct: 351 EMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTILYNPAVRSSVGSGSIQHN 410
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
G +S P A + + GG G R
Sbjct: 411 GGNSDSYNSRPYNRTGNGADFS------DQSGGYG----------------------RRS 442
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + +NR P + ++ Q T+ +++P +++G +IG+GGTKI EIR+ SGA I
Sbjct: 443 NPDT-----SNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRGGTKITEIRRSSGARIS 496
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 497 IAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 531
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 58/250 (23%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G +IG+ G KI I+ SG +R+ E S +R + + GTP+ I A + I
Sbjct: 324 MGTIIGRQGLKIKHIQDASG--VRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEI---- 377
Query: 333 ELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNA 392
G+ +DD+ IL P ++
Sbjct: 378 ------------GKCLIDDWQRGT------------------------GTILYNPAVRSS 401
Query: 393 LTS--LSALGGLSDLLGG------GSSGGGSGNSGGFGGV--PQGPN--YANIQTTGVQR 440
+ S + GG SD G+ S SGG+G P N Y + G +
Sbjct: 402 VGSGSIQHNGGNSDSYNSRPYNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEI 461
Query: 441 RMRHI-MQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFR 496
+ ++I + VG IIG+ G + ++R SG++I I+ + T ER+ T++GS + +
Sbjct: 462 QTQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEK 521
Query: 497 AFSLITKNIE 506
A L+ +N+E
Sbjct: 522 ALYLLYENLE 531
>gi|346971553|gb|EGY15005.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 514
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 194/390 (49%), Gaps = 48/390 (12%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 41 EYAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLT 95
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
+ G +++ RA++++ + + E + +GG +S ++L++ +Q G+IIG+ G
Sbjct: 96 ITGGCEAISRAYAIVAQALLEGAPSLG--MGGVPQSNGTHPIKLLISHNQMGTIIGRQGL 153
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + +MLP STER V ++G PD + AI++I +VD +G T+
Sbjct: 154 KIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPDGIRAAIWEISKCLVDDWQRGTGTVL 213
Query: 605 YRPLPQNAGG--PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 662
Y P+ + G P + G ++ G ++P G +S GG
Sbjct: 214 YNPVVRTQPGSTPAVGGTSPSYPSTGGGRSQEYSSPRVLRTGNGADFSSNGG-------- 265
Query: 663 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 722
P ++ + + +R P+ N ++ Q T+ +++P +++G +I
Sbjct: 266 ------------GQRPYSRRSDSDAASRGP---PTHDENGEELQ-TQNISIPADMVGCII 309
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELL 780
G+ G+KI EIRK SGA I I+K+ +E + +R T+ GT A A +L+ N+ E +
Sbjct: 310 GRAGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGTSKANESALFLLYENLEAEKM 367
Query: 781 RANLNGEGGGESNMDDFSSDNNLPSSAPLA 810
R + ++ + S ++LP P+
Sbjct: 368 RRS-------QAQTSEAISRSDLPRGCPIC 390
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 186/370 (50%), Gaps = 43/370 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G +++ RA++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEAISRAYAIVAQALL 115
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 116 EGAPSLG--MGGVPQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEML 173
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG--PGLIGNQF 177
P STER V ++G PD + AI++I +VD +G T+ Y P+ + G P + G
Sbjct: 174 PQSTERIVEVQGTPDGIRAAIWEISKCLVDDWQRGTGTVLYNPVVRTQPGSTPAVGGTSP 233
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
++ G ++P G +S GG P ++
Sbjct: 234 SYPSTGGGRSQEYSSPRVLRTGNGADFSSNGG--------------------GQRPYSRR 273
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ + +R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I I
Sbjct: 274 SDSDAASRGP---PTHDENGEELQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 329
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLRANLNGEGGGESNMDDFSSD 355
+K+ +E + +R T+ GT A A +L+ N+ E +R + ++ + S
Sbjct: 330 AKAPHDE--TGERMFTIMGTSKANESALFLLYENLEAEKMRRS-------QAQTSEAISR 380
Query: 356 NNLPSSAPLA 365
++LP P+
Sbjct: 381 SDLPRGCPIC 390
>gi|358387038|gb|EHK24633.1| hypothetical protein TRIVIDRAFT_54511 [Trichoderma virens Gv29-8]
Length = 369
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 184/359 (51%), Gaps = 44/359 (12%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 41 EYAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLT 95
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
+ G D++ RA++++ + + E +GG +S ++L++ +Q G+IIG+ G
Sbjct: 96 ITGGCDAISRAYAIVARALLEGAPAVG--MGGVIQSNGTHPIKLLISHNQMGTIIGRQGL 153
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + +MLP STER V ++G P+ + +AI++I +VD +G T+
Sbjct: 154 KIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAIWEISKCLVDDWQRGTGTVL 213
Query: 605 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
Y P+ + P G+ G + G D G +P G ++GG
Sbjct: 214 YNPVVRTQ--PSGSGSLGGSGYNGGGRGDYG-SPRVMRTGNGADFSNGGS---------- 260
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
P ++ + + NR P+ N ++ Q T+ +++P +++G +IG+
Sbjct: 261 ------------RPFSRRSDSDAANRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGR 304
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
GG+KI +IRK SGA I I+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 305 GGSKISDIRKTSGARISIAKAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 361
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 176/339 (51%), Gaps = 39/339 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRAYAIVARALL 115
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 116 EGAPAVG--MGGVIQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEML 173
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P+ + +AI++I +VD +G T+ Y P+ + P G+ G
Sbjct: 174 PQSTERIVEVQGTPEGIQRAIWEISKCLVDDWQRGTGTVLYNPVVRTQ--PSGSGSLGGS 231
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ G D G +P G ++GG P ++ +
Sbjct: 232 GYNGGGRGDYG-SPRVMRTGNGADFSNGGS----------------------RPFSRRSD 268
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ NR P+ N ++ Q T+ +++P +++G +IG+GG+KI +IRK SGA I I+K
Sbjct: 269 SDAANRGP---PTHDENGEEIQ-TQNISIPADMVGCIIGRGGSKISDIRKTSGARISIAK 324
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 325 APHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 361
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 241 NQHNRNNRDGP----SQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
+Q + R GP + KT+++ Q Q+T V ++ G +IGKGG + ++R +G
Sbjct: 20 DQLKMDERLGPDGELAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVK 79
Query: 295 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+SK + +DR +T+TG DAI+ A ++
Sbjct: 80 AGVSKVV---QGVHDRVLTITGGCDAISRAYAIV 110
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 686 NQHNRNNRDGP----SQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 739
+Q + R GP + KT+++ Q Q+T V ++ G +IGKGG + ++R +G
Sbjct: 20 DQLKMDERLGPDGELAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVK 79
Query: 740 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+SK + +DR +T+TG DAI+ A ++
Sbjct: 80 AGVSKVV---QGVHDRVLTITGGCDAISRAYAIV 110
>gi|322708646|gb|EFZ00223.1| hypothetical protein MAA_04000 [Metarhizium anisopliae ARSEF 23]
Length = 456
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 185/409 (45%), Gaps = 66/409 (16%)
Query: 405 LLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKK 464
+ GGS +G S N A +R ++ E +IIGK GE V
Sbjct: 73 VTDGGSDTKAAGASNATASSDTAANSAAAHDETSWIHIRAVISSPEAATIIGKGGENVSN 132
Query: 465 LREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLG--GNG 520
+R+ S +K +SD ERI+TV G AF LI + + N+ LG
Sbjct: 133 IRKMSNAKCTVSDYQKGAVERILTVSGI------AFGLIIRTL------NNEPLGEASTA 180
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
S+ LRL++P GSIIGKGG++I+ I+E SGA + + LP S+ER + + GV D
Sbjct: 181 SSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPMSSERSLVVMGVAD 240
Query: 581 AVTQAIYQICLIMVDS------------------PPKGA------TIPYRPLPQ--NAGG 614
AV A Y + +++ P G+ +PY P P + G
Sbjct: 241 AVHIATYYVGSTLLEQLNERFGGPAASAYATRSGAPAGSIPGGMQVVPYSPQPASGHYGR 300
Query: 615 PGLIGNQFGMQNSLMG----APDMGNNPLAGLAALGLG-GNSGGGMGGGLNAAALAALAS 669
P G + M P +N A+ + G GG +A
Sbjct: 301 PENYGRHQDRRAHHMPPATYPPHYPHNAAPPNPAMPMQYGGQQAAYGGAPHA-------- 352
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
T HMP + + GP + +T+++ +PN+++GA+IGKGG KI
Sbjct: 353 ----TQHMPPHVGPQPH----GGPQGPPMQHGMPGGPLTQQIFIPNDMVGAIIGKGGQKI 404
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
EIR+ISG++I+I +E +++SN+R +T+TGT + +A Y++ +E
Sbjct: 405 NEIRQISGSVIKI---NEPQDNSNERLVTITGTEECNRMALYMLYSRLE 450
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 172/364 (47%), Gaps = 66/364 (18%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V +R+ S +K +SD ERI+TV G AF LI + +
Sbjct: 118 EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGI------AFGLIIRTL-- 169
Query: 63 FHKNQNKHLG--GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
N+ LG S+ LRL++P GSIIGKGG++I+ I+E SGA + + L
Sbjct: 170 ----NNEPLGEASTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCL 225
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS------------------PPKGA------ 156
P S+ER + + GV DAV A Y + +++ P G+
Sbjct: 226 PMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSGAPAGSIPGGMQ 285
Query: 157 TIPYRPLPQ--NAGGPGLIGNQFGMQNSLMG----APDMGNNPLAGLAALGLG-GNSGGG 209
+PY P P + G P G + M P +N A+ + G
Sbjct: 286 VVPYSPQPASGHYGRPENYGRHQDRRAHHMPPATYPPHYPHNAAPPNPAMPMQYGGQQAA 345
Query: 210 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVP 269
GG +A T HMP + + GP + +T+++ +P
Sbjct: 346 YGGAPHA------------TQHMPPHVGPQPH----GGPQGPPMQHGMPGGPLTQQIFIP 389
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
N+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT + +A Y++
Sbjct: 390 NDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECNRMALYMLY 446
Query: 330 MSVE 333
+E
Sbjct: 447 SRLE 450
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 189 LLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 246
Query: 326 YLINMSVELLRANLNGEGGG 345
Y + + L LN GG
Sbjct: 247 YYVGST---LLEQLNERFGG 263
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 189 LLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 246
Query: 771 YLINMSVELLRANLNGEGGG 790
Y + + L LN GG
Sbjct: 247 YYVGST---LLEQLNERFGG 263
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E+ I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 102 HDETSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTV-SDYQKGAVERILTVSGI 160
>gi|171686672|ref|XP_001908277.1| hypothetical protein [Podospora anserina S mat+]
gi|170943297|emb|CAP68950.1| unnamed protein product [Podospora anserina S mat+]
Length = 386
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 176/361 (48%), Gaps = 48/361 (13%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK+G+ V LR+E+G K +S +R++T+
Sbjct: 53 YAQTQMT-----LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVYDRVLTI 107
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKG 543
G +++ +A++ + + E +GG NG + +L++ +Q G++IG+
Sbjct: 108 TGGCEAISKAYAKVASALMEGAPAMG--MGGVVAANGTHPI---KLLISHNQMGTVIGRQ 162
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-AT 602
G +IK I++ SG + +MLP STER V ++G P+ + +A ++IC +VD +G T
Sbjct: 163 GLKIKHIQDVSGVRMVAQKEMLPQSTERVVEVQGTPEGIQRATWEICKCLVDDWQRGQGT 222
Query: 603 IPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 662
+ Y P+ + + P G + + GN GG
Sbjct: 223 VLYNPVVRTG------TGAGAPAMGGASSYPQERAPYGGSSRVTRTGNGADFSNGG---- 272
Query: 663 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 722
PR N+ + + R P+ N ++ Q T+ +++P +++G +I
Sbjct: 273 ---------------PRQYNRRSDS-DAAQRGPPTHDENGEEIQ-TQNISIPADMVGCII 315
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELL 780
G+ G+KI EIRK SGA I I+K+ +D+ +R T+ G+ A A YL+ N+ E +
Sbjct: 316 GRAGSKISEIRKTSGARISIAKAP--HDDTGERMFTIMGSAKANETALYLLYENLEAEKI 373
Query: 781 R 781
R
Sbjct: 374 R 374
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 168/342 (49%), Gaps = 43/342 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++T+ G +++ +A++ + +
Sbjct: 67 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVYDRVLTITGGCEAISKAYAKVASALM 126
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + +L++ +Q G++IG+ G +IK I++ SG +
Sbjct: 127 EGAPAMG--MGGVVAANGTHPI---KLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQK 181
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A ++IC +VD +G T+ Y P+ +
Sbjct: 182 EMLPQSTERVVEVQGTPEGIQRATWEICKCLVDDWQRGQGTVLYNPVVRTG------TGA 235
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+ P G + + GN GG PR
Sbjct: 236 GAPAMGGASSYPQERAPYGGSSRVTRTGNGADFSNGG-------------------PRQY 276
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N+ + + R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK SGA I
Sbjct: 277 NRRSDS-DAAQRGPPTHDENGEEIQ-TQNISIPADMVGCIIGRAGSKISEIRKTSGARIS 334
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 335 IAKAP--HDDTGERMFTIMGSAKANETALYLLYENLEAEKIR 374
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 36 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE----------SQLIQLRLI 85
P I+ + DS+ + + ++ ++ N LG +GE + LR I
Sbjct: 4 PNPILNMSAPQDSVPSNGADLNESFDQLKLNDEPRLGPDGEPAPKTDEEYAQTQMTLRAI 63
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC 145
V + + G IIGK G + +R+ +G V S ++P +R + I G +A+++A ++
Sbjct: 64 VSSKEAGVIIGKAGKNVADLRDETGVKAGV-SKVVPGVYDRVLTITGGCEAISKAYAKVA 122
Query: 146 LIMVDSPP 153
+++ P
Sbjct: 123 SALMEGAP 130
>gi|119195161|ref|XP_001248184.1| hypothetical protein CIMG_01955 [Coccidioides immitis RS]
gi|303310665|ref|XP_003065344.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105006|gb|EER23199.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|392862573|gb|EAS36772.2| KH domain RNA-binding protein [Coccidioides immitis RS]
Length = 366
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 182/356 (51%), Gaps = 62/356 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+
Sbjct: 50 LRAIVSTKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYG 109
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQ------LRLIVPASQCGSIIGKGGSQIKTIRET 553
++ K++ E +GG +IQ +RL++ +Q G+IIG+ G +IK I++
Sbjct: 110 MVAKSLLEGAPQMG--MGG-----IIQNNGTHPVRLLISHNQMGTIIGRNGLKIKCIQDA 162
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP-LPQN 611
SG + +MLP STER V ++G P+ + +A+++I ++D +G T+ Y P + N
Sbjct: 163 SGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRAN 222
Query: 612 AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ 671
GG + M + +G NP G G G +
Sbjct: 223 VGG------------ASMNSAFVGPNPNT------YSGRPYNRTGNGADF---------- 254
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGT 727
++H P N+ R+N D P++ T + T+ +++P++++G +IG+GG+
Sbjct: 255 --SDH-PGTYNR------RHNSDAPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGS 305
Query: 728 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
KI EIR+ SGA I I+K++ +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 306 KISEIRRSSGARISIAKAAHDE--TGERMFTIMGSAQANEKALYLLYENLEAEKMR 359
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 178/349 (51%), Gaps = 62/349 (17%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+ ++ K++
Sbjct: 57 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYGMVAKSLL 116
Query: 62 EFHKNQNKHLGGNGESQLIQ------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
E +GG +IQ +RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 117 EGAPQMG--MGG-----IIQNNGTHPVRLLISHNQMGTIIGRNGLKIKCIQDASGVRMVA 169
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP-LPQNAGGPGLI 173
+MLP STER V ++G P+ + +A+++I ++D +G T+ Y P + N GG
Sbjct: 170 QKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRANVGG---- 225
Query: 174 GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP 233
+ M + +G NP G G G + ++H P
Sbjct: 226 --------ASMNSAFVGPNPNT------YSGRPYNRTGNGADF------------SDH-P 258
Query: 234 RNQNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
N+ R+N D P++ T + T+ +++P++++G +IG+GG+KI EIR+
Sbjct: 259 GTYNR------RHNSDAPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRR 312
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
SGA I I+K++ +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 313 SSGARISIAKAAHDE--TGERMFTIMGSAQANEKALYLLYENLEAEKMR 359
>gi|302654659|ref|XP_003019130.1| hypothetical protein TRV_06814 [Trichophyton verrucosum HKI 0517]
gi|291182834|gb|EFE38485.1| hypothetical protein TRV_06814 [Trichophyton verrucosum HKI 0517]
Length = 379
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 179/353 (50%), Gaps = 55/353 (15%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S
Sbjct: 62 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYS 121
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
++ K++ E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 122 IVAKSLLEGAPQMG--MGGVVQNNGTHSV---RLLISHNQMGTIIGRQGLKIKYIQDASG 176
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +AI++I ++D +G T+ Y P
Sbjct: 177 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNP------- 229
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
A A++G G SG G G N++ + S +T
Sbjct: 230 -------------------------AVRASVGSG--SGQGAVTGTNSSYGGSSRSYN-RT 261
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
+ + + R N D P++ T + T+ +++P++++G +IG+GGTKI
Sbjct: 262 GNGADFSDHPSSYSRRGNNDNPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKIS 321
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
EIR+ SGA I I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 322 EIRRSSGARISIAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 372
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 175/346 (50%), Gaps = 55/346 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S++ K++
Sbjct: 69 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYSIVAKSLL 128
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 129 EGAPQMG--MGGVVQNNGTHSV---RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQK 183
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +AI++I ++D +G T+ Y P
Sbjct: 184 EMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNP-------------- 229
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
A A++G G SG G G N++ + S +T +
Sbjct: 230 ------------------AVRASVGSG--SGQGAVTGTNSSYGGSSRSYN-RTGNGADFS 268
Query: 237 NQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
+ + R N D P++ T + T+ +++P++++G +IG+GGTKI EIR+ SG
Sbjct: 269 DHPSSYSRRGNNDNPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSG 328
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
A I I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 329 ARISIAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 372
>gi|260949329|ref|XP_002618961.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
gi|238846533|gb|EEQ35997.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
Length = 488
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 186/374 (49%), Gaps = 49/374 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R KE +++GK GE + +RE++ +IY+S++ + PER+++V GS + + RAF
Sbjct: 116 VRMYCPVKEAAAVVGKKGEKITHIREKANVRIYVSENLKNVPERVISVKGSAEDVARAFG 175
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LIT+ I E +++ + S+ L+L+VP G IIGK GS+ + I E S A +
Sbjct: 176 LITRAILEEPEDEPASIT----SKQYNLKLLVPHPMVGYIIGKSGSKFREIEENSAAKLK 231
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRP------LPQ 610
A LP ST+R +++ GV DA+ A+Y IC +M+ D K I Y P LP
Sbjct: 232 AAEQALPYSTDRVLSVTGVGDAIHIAVYYICSVMLAHRDCLKKHKIIYYNPSNFRPQLP- 290
Query: 611 NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA-----LA 665
A P + + QN++ P M NP+ + +G G N G +
Sbjct: 291 -AANPIMNMSIAPQQNAV---PYMTGNPMQ-MQQMGPGPNLKDAHGSYSQVPKPYNFQMM 345
Query: 666 ALASSQLKTN---HMPRNQNQNQNQHNRNNRDG-----------PSQKTNQQQNQITKEM 711
S++ + N +MP Q Q Q++ + G P Q + ++ ++++
Sbjct: 346 FQPSARPQFNGPSNMPNTQIQIGAQNSFTDEHGNTIIGDVITQMPVQ-ISSSPDKFSEDV 404
Query: 712 TVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEE-------EEDSNDRTITMTGTP 763
V N IG+VIGKGG I +IR+ SG ++I + + +N R +T+TG+
Sbjct: 405 FVANSNIGSVIGKGGNNIKQIRESSGCTYVKIEPDQNQSILLGGGKGLTNIRKLTLTGSY 464
Query: 764 DAIALAQYLINMSV 777
++I A YLIN +
Sbjct: 465 NSIQTAIYLINQRI 478
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 184/367 (50%), Gaps = 49/367 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +++GK GE + +RE++ +IY+S++ + PER+++V GS + + RAF LIT+ I
Sbjct: 123 KEAAAVVGKKGEKITHIREKANVRIYVSENLKNVPERVISVKGSAEDVARAFGLITRAIL 182
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E +++ + S+ L+L+VP G IIGK GS+ + I E S A + A LP
Sbjct: 183 EEPEDEPASIT----SKQYNLKLLVPHPMVGYIIGKSGSKFREIEENSAAKLKAAEQALP 238
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRP------LPQNAGGPGL 172
ST+R +++ GV DA+ A+Y IC +M+ D K I Y P LP A P +
Sbjct: 239 YSTDRVLSVTGVGDAIHIAVYYICSVMLAHRDCLKKHKIIYYNPSNFRPQLP--AANPIM 296
Query: 173 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA-----LAALASSQL 227
+ QN++ P M NP+ + +G G N G + S++
Sbjct: 297 NMSIAPQQNAV---PYMTGNPMQ-MQQMGPGPNLKDAHGSYSQVPKPYNFQMMFQPSARP 352
Query: 228 KTN---HMPRNQNQNQNQHNRNNRDG-----------PSQKTNQQQNQITKEMTVPNELI 273
+ N +MP Q Q Q++ + G P Q + ++ ++++ V N I
Sbjct: 353 QFNGPSNMPNTQIQIGAQNSFTDEHGNTIIGDVITQMPVQ-ISSSPDKFSEDVFVANSNI 411
Query: 274 GAVIGKGGTKIFEIRKISGA-MIRISKSSEE-------EEDSNDRTITMTGTPDAIALAQ 325
G+VIGKGG I +IR+ SG ++I + + +N R +T+TG+ ++I A
Sbjct: 412 GSVIGKGGNNIKQIRESSGCTYVKIEPDQNQSILLGGGKGLTNIRKLTLTGSYNSIQTAI 471
Query: 326 YLINMSV 332
YLIN +
Sbjct: 472 YLINQRI 478
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ++ + +R+ P + +++GK G +I IRE + +YV S+ L N ER +++KG
Sbjct: 108 DDDASTVSVRMYCPVKEAAAVVGKKGEKITHIREKANVRIYV-SENLKNVPERVISVKGS 166
Query: 134 PDAVTQAIYQICLIMVDSP 152
+ V +A I +++ P
Sbjct: 167 AEDVARAFGLITRAILEEP 185
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ ++ + +R+ P + +++GK G +I IRE + +YV S+ L N ER +++KG
Sbjct: 108 DDDASTVSVRMYCPVKEAAAVVGKKGEKITHIREKANVRIYV-SENLKNVPERVISVKGS 166
Query: 579 PDAVTQAIYQICLIMVDSP 597
+ V +A I +++ P
Sbjct: 167 AEDVARAFGLITRAILEEP 185
>gi|380479025|emb|CCF43264.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 384
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 180/368 (48%), Gaps = 48/368 (13%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V LR+E+G K +S +R++T
Sbjct: 42 EYAQAQLT-----LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLT 96
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQ---LIQLRLIVPASQCGSIIGKG 543
+ G S+ A+S++ + + E + LG G Q ++L++ +Q G+IIG+
Sbjct: 97 ITGGCQSVSEAYSIVARALLEGAPS----LGMGGVVQNNGTHPIKLLISHNQMGTIIGRQ 152
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-T 602
G +IK I++ SG + +MLP STER V ++G P+ + A+++IC +VD +G T
Sbjct: 153 GLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIKGAVWEICKCLVDDWQRGTGT 212
Query: 603 IPYRPL----PQNAGGPGLIGNQF---GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
+ Y P P G F G +++ AP +
Sbjct: 213 VLYNPAVRTQPGTTSTTGGSTATFSSGGGRSNDYSAPRVMRT------------------ 254
Query: 656 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
G G + + + + P + + + +R P+ N ++ Q T+ +++P
Sbjct: 255 GNGADFSTNSNSNNGGGGGGGRPYGRRSDSDAASRGP---PTHDENGEELQ-TQNISIPA 310
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI-- 773
+++G +IG+ G+KI EIRK SGA I I+K+ +D+ +R T+ GT A A +L+
Sbjct: 311 DMVGCIIGRAGSKISEIRKTSGARISIAKAP--HDDTGERMFTIMGTAKANESALFLLYE 368
Query: 774 NMSVELLR 781
N+ E +R
Sbjct: 369 NLEAEKMR 376
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 172/348 (49%), Gaps = 43/348 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++T+ G S+ A+S++ + +
Sbjct: 57 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCQSVSEAYSIVARALL 116
Query: 62 EFHKNQNKHLGGNGESQ---LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
E + LG G Q ++L++ +Q G+IIG+ G +IK I++ SG + +
Sbjct: 117 EGAPS----LGMGGVVQNNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKE 172
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPL----PQNAGGPGLI 173
MLP STER V ++G P+ + A+++IC +VD +G T+ Y P P G
Sbjct: 173 MLPQSTERIVEVQGTPEGIKGAVWEICKCLVDDWQRGTGTVLYNPAVRTQPGTTSTTGGS 232
Query: 174 GNQF---GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
F G +++ AP + G G + + + +
Sbjct: 233 TATFSSGGGRSNDYSAPRVMRT------------------GNGADFSTNSNSNNGGGGGG 274
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
P + + + +R P+ N ++ Q T+ +++P +++G +IG+ G+KI EIRK
Sbjct: 275 GRPYGRRSDSDAASRGP---PTHDENGEELQ-TQNISIPADMVGCIIGRAGSKISEIRKT 330
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
SGA I I+K+ +D+ +R T+ GT A A +L+ N+ E +R
Sbjct: 331 SGARISIAKAP--HDDTGERMFTIMGTAKANESALFLLYENLEAEKMR 376
>gi|346324545|gb|EGX94142.1| KH domain RNA-binding protein [Cordyceps militaris CM01]
Length = 420
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 174/359 (48%), Gaps = 42/359 (11%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T+
Sbjct: 42 YAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI 96
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNK--HLGGNGESQLIQLRLIVPASQCGSIIGKGGS 545
G D++ RA++++ + + E + GNG + +L++ +Q G++IG+ G
Sbjct: 97 TGGCDAISRAYAIVARALLEGAPAMGMGGVVQGNGTHPI---KLLISHNQMGTVIGRQGL 153
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + +MLP STER V ++G P+ + +A+++IC +VD +G T+
Sbjct: 154 KIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRALWEICKCLVDDWQRGTGTVL 213
Query: 605 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
Y P+ + G A + + G S GGG
Sbjct: 214 YNPVVRTQAG----TTGSTGSTGSFAATGNTRAEYSTPRVMRTGNGSDFSNGGGSR---- 265
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
P ++ + + +R GP + T+ +++P +++G +IG+
Sbjct: 266 -------------PFSRRSDSDAASR----GPPTHDENGEEIQTQNISIPADMVGCIIGR 308
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
G+KI EIRK SGA I I+K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 309 AGSKISEIRKTSGARISIAKAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 365
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 166/340 (48%), Gaps = 37/340 (10%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRAYAIVARALL 115
Query: 62 EFHKNQNK--HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
E + GNG + +L++ +Q G++IG+ G +IK I++ SG + +M
Sbjct: 116 EGAPAMGMGGVVQGNGTHPI---KLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEM 172
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFG 178
LP STER V ++G P+ + +A+++IC +VD +G T+ Y P+ + G
Sbjct: 173 LPQSTERIVEVQGTPEGIQRALWEICKCLVDDWQRGTGTVLYNPVVRTQAG----TTGST 228
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
A + + G S GGG P ++
Sbjct: 229 GSTGSFAATGNTRAEYSTPRVMRTGNGSDFSNGGGSR-----------------PFSRRS 271
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
+ + +R GP + T+ +++P +++G +IG+ G+KI EIRK SGA I I+
Sbjct: 272 DSDAASR----GPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIA 327
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
K+ +E + +R T+ GT A A +L+ N+ E +R
Sbjct: 328 KAPHDE--TGERMFTIMGTAKANESALFLLYENLEAEKMR 365
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 33/250 (13%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ + + +G VIG+ G KI I+ +SG +R+ E S +R + + GTP+ I A
Sbjct: 136 KLLISHNQMGTVIGRQGLKIKHIQDVSG--VRMVAQKEMLPQSTERIVEVQGTPEGIQRA 193
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
+ I + +DD+ P+ A +
Sbjct: 194 LWEICKCL----------------VDDWQRGTGTVLYNPVVRTQAGTTGSTGSTGSFAAT 237
Query: 385 TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGP-----NYANIQTTGVQ 439
A + + G SD GG S S S +GP N IQT +
Sbjct: 238 GNTRAEYSTPRVMRTGNGSDFSNGGGSRPFSRRSDS-DAASRGPPTHDENGEEIQTQNIS 296
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFR 496
+ VG IIG++G + ++R+ SG++I I+ + T ER+ T++G+ +
Sbjct: 297 ------IPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANES 350
Query: 497 AFSLITKNIE 506
A L+ +N+E
Sbjct: 351 ALFLLYENLE 360
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 251 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 34 PAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 90
Query: 309 DRTITMTGTPDAIALAQYLI 328
DR +T+TG DAI+ A ++
Sbjct: 91 DRVLTITGGCDAISRAYAIV 110
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 696 PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
P+ KT+++ Q Q+T V ++ G +IGKGG + ++R +G +SK + +
Sbjct: 34 PAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV---QGVH 90
Query: 754 DRTITMTGTPDAIALAQYLI 773
DR +T+TG DAI+ A ++
Sbjct: 91 DRVLTITGGCDAISRAYAIV 110
>gi|170592745|ref|XP_001901125.1| KH domain containing protein [Brugia malayi]
gi|158591192|gb|EDP29805.1| KH domain containing protein [Brugia malayi]
Length = 354
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 170/337 (50%), Gaps = 65/337 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ + G+IIGK GE+VK ++ E + + + DS TPER+V ++ +++++ + +I
Sbjct: 69 LRLLVTSRGAGAIIGKKGESVKNIQTECDATVSVPDSQTPERVVQLVAAVENVVKCVEMI 128
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
I+E H NQN+ +L+++V S G++IG+GGS+IK +RE +G + V
Sbjct: 129 IARIDEVHDNQNRDS---------ELKVLVHQSHAGAVIGRGGSRIKELREENGVDLKVY 179
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
S+ P STER + I G P+ + + I + + P KG + PY + + ++ N+
Sbjct: 180 SECCPQSTERIIQINGKPEKIVACLVTIINTLKEIPIKGPSRPYESIFFDP----MVANE 235
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
+G G A G +SG G+ G + + + +
Sbjct: 236 YG-----------------GYA----GDHSGRGIRGYGPRGRIPLPSYGSVPPAY----- 269
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
DGP + T ++TVPNEL G +IG+GG +I IR SGA I+
Sbjct: 270 -----------DDGPLE---------TAQVTVPNELGGTIIGRGGERIRRIRDESGAHIK 309
Query: 742 ISKSSEEEEDSN-DRTITMTGTPDAIALAQYLINMSV 777
I EEED N +R IT++GTP I +AQ+L+ V
Sbjct: 310 I-----EEEDPNGERIITISGTPSQIEMAQFLLQQCV 341
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 165/327 (50%), Gaps = 65/327 (19%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G+IIGK GE+VK ++ E + + + DS TPER+V ++ +++++ + +I I+E H N
Sbjct: 79 GAIIGKKGESVKNIQTECDATVSVPDSQTPERVVQLVAAVENVVKCVEMIIARIDEVHDN 138
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
QN+ +L+++V S G++IG+GGS+IK +RE +G + V S+ P STER
Sbjct: 139 QNRDS---------ELKVLVHQSHAGAVIGRGGSRIKELREENGVDLKVYSECCPQSTER 189
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
+ I G P+ + + I + + P KG + PY + + ++ N++G
Sbjct: 190 IIQINGKPEKIVACLVTIINTLKEIPIKGPSRPYESIFFDP----MVANEYG-------- 237
Query: 187 PDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRN 246
G A G +SG G+ G + + + +
Sbjct: 238 ---------GYA----GDHSGRGIRGYGPRGRIPLPSYGSVPPAY--------------- 269
Query: 247 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
DGP + T ++TVPNEL G +IG+GG +I IR SGA I+I EEED
Sbjct: 270 -DDGPLE---------TAQVTVPNELGGTIIGRGGERIRRIRDESGAHIKI-----EEED 314
Query: 307 SN-DRTITMTGTPDAIALAQYLINMSV 332
N +R IT++GTP I +AQ+L+ V
Sbjct: 315 PNGERIITISGTPSQIEMAQFLLQQCV 341
>gi|328850348|gb|EGF99514.1| hypothetical protein MELLADRAFT_73383 [Melampsora larici-populina
98AG31]
Length = 383
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 176/353 (49%), Gaps = 40/353 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ KE G IIGK G+TV ++RE++G+K +S + +R+++V G ++ + +A+S
Sbjct: 39 LRSLVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRVLSVSGGLEGVSKAYS 98
Query: 500 LITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
++ I + + +R++V + GSIIG+ GS+IK I++ SG
Sbjct: 99 IVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSIIGRQGSKIKEIQDISGVR 158
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLPQNAGGP 615
+ + +MLP STER V ++G P+A+ AI++I CL M D T+ Y+P A GP
Sbjct: 159 MVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWERAHGTVLYQP---GALGP 214
Query: 616 -GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G+ G + G G G SGG M G L
Sbjct: 215 DGVTAAYPGGVLAGGFGVGGQGYGNGGARRAGSGVPSGGHMAGDL--------------- 259
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------ITKEMTVPNELIGAVIGKG 725
P + N H+ N +G + N + T+ +++P +++G +IGKG
Sbjct: 260 ---PGRRPHNGTYHSNGNENGHRSRENSLASAPAPVADRLLRTQNISIPADMVGCIIGKG 316
Query: 726 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
G KI EIR++SG+ I I+K+ +D+ +R T+TG+ +A A +L+ +E
Sbjct: 317 GAKINEIRRMSGSRISIAKTP--HDDTGERMFTITGSSEANEKALFLLYNQLE 367
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 172/346 (49%), Gaps = 40/346 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+TV ++RE++G+K +S + +R+++V G ++ + +A+S++ I
Sbjct: 46 KEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRVLSVSGGLEGVSKAYSIVADAIL 105
Query: 62 E--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
+ + +R++V + GSIIG+ GS+IK I++ SG + + +M
Sbjct: 106 QNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSIIGRQGSKIKEIQDISGVRMVASKEM 165
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLPQNAGGP-GLIGNQ 176
LP STER V ++G P+A+ AI++I CL M D T+ Y+P A GP G+
Sbjct: 166 LPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWERAHGTVLYQP---GALGPDGVTAAY 221
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
G + G G G SGG M G L P +
Sbjct: 222 PGGVLAGGFGVGGQGYGNGGARRAGSGVPSGGHMAGDL------------------PGRR 263
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQ---------ITKEMTVPNELIGAVIGKGGTKIFEI 287
N H+ N +G + N + T+ +++P +++G +IGKGG KI EI
Sbjct: 264 PHNGTYHSNGNENGHRSRENSLASAPAPVADRLLRTQNISIPADMVGCIIGKGGAKINEI 323
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
R++SG+ I I+K+ +D+ +R T+TG+ +A A +L+ +E
Sbjct: 324 RRMSGSRISIAKTP--HDDTGERMFTITGSSEANEKALFLLYNQLE 367
>gi|302508471|ref|XP_003016196.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
gi|291179765|gb|EFE35551.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
Length = 531
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 175/348 (50%), Gaps = 45/348 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S
Sbjct: 214 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYS 273
Query: 500 LITKNIEEFHKNQNKHLGGNGESQ---LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
++ K++ E +G G Q +RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 274 IVAKSLLE----GAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGV 329
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGP 615
+ +MLP STER V ++G P+ + +AI++I ++D +G T+ Y P
Sbjct: 330 RMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNP-------- 381
Query: 616 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
+ + + G NP GG+S G N A + SS +
Sbjct: 382 ---AVRASVGSGSGQGSVTGTNP-------SYGGSSRSYNRTG-NGADFSDHPSSYSR-- 428
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
R N N N+ G T + T+ +++P++++G +IG+GGTKI EIR+
Sbjct: 429 ---RGNNDNPNR-------GIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRS 478
Query: 736 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
SGA I I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 479 SGARISIAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 524
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 45/341 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S++ K++
Sbjct: 221 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYSIVAKSLL 280
Query: 62 EFHKNQNKHLGGNGESQ---LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
E +G G Q +RL++ +Q G+IIG+ G +IK I++ SG + +
Sbjct: 281 E----GAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKE 336
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQF 177
MLP STER V ++G P+ + +AI++I ++D +G T+ Y P +
Sbjct: 337 MLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNP-----------AVRA 385
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+ + G NP GG+S G N A + SS + R N
Sbjct: 386 SVGSGSGQGSVTGTNP-------SYGGSSRSYNRTG-NGADFSDHPSSYSR-----RGNN 432
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
N N+ G T + T+ +++P++++G +IG+GGTKI EIR+ SGA I I
Sbjct: 433 DNPNR-------GIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISI 485
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 486 AKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 524
>gi|226289821|gb|EEH45305.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 364
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 192/368 (52%), Gaps = 47/368 (12%)
Query: 423 GVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SST 480
G P+GP + + +R I+ KE G IIGK+G+ V LR+E+G K +S
Sbjct: 28 GDPEGPPKSEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGV 87
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQC 536
+R++TV G + +A++++ K++ E +GG NG + RL++ +Q
Sbjct: 88 HDRVLTVTGPLQGAAKAYAIVAKSLLEGAPQLG--MGGVVSNNGTHPV---RLLISHNQM 142
Query: 537 GSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
G+IIG+ G +IK I++ SG + +MLP STER V ++G P+ + +A+++I ++D
Sbjct: 143 GTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDD 202
Query: 597 PPKGA-TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
+G T+ Y P ++ S+ GAP + N+ +G ++ G GG S
Sbjct: 203 WQRGTGTVLYNP---------------AVRASVGGAP-INNSLGSGGSSGGYGGRSYNRT 246
Query: 656 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
G G A +T R N + NR P + ++ Q T+ +++P+
Sbjct: 247 GNG---------ADFSDQTGGYSRRSNSDA-----ANRGIPLVTEDGEEVQ-TQNISIPS 291
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI-- 773
+++G +IG+GG+KI EIR++SGA I I+K+ +E + +R T+ G+ A A YL+
Sbjct: 292 DMVGCIIGRGGSKISEIRRVSGARISIAKAPHDE--TGERMFTIMGSAAANEKALYLLYE 349
Query: 774 NMSVELLR 781
N+ E +R
Sbjct: 350 NLEAEKMR 357
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 181/342 (52%), Gaps = 47/342 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A++++ K++
Sbjct: 54 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGAAKAYAIVAKSLL 113
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 114 EGAPQLG--MGGVVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQK 168
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++I ++D +G T+ Y P
Sbjct: 169 EMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNP-------------- 214
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
++ S+ GAP + N+ +G ++ G GG S G G A +T R
Sbjct: 215 -AVRASVGGAP-INNSLGSGGSSGGYGGRSYNRTGNG---------ADFSDQTGGYSRRS 263
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + NR P + ++ Q T+ +++P++++G +IG+GG+KI EIR++SGA I
Sbjct: 264 NSDA-----ANRGIPLVTEDGEEVQ-TQNISIPSDMVGCIIGRGGSKISEIRRVSGARIS 317
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K+ +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 318 IAKAPHDE--TGERMFTIMGSAAANEKALYLLYENLEAEKMR 357
>gi|453088188|gb|EMF16228.1| KH domain RNA-binding protein [Mycosphaerella populorum SO2202]
Length = 369
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 178/359 (49%), Gaps = 43/359 (11%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV 487
YA Q T +R I+ KE G IIGK+G+ V LR+++G + +S +R++TV
Sbjct: 38 YAQSQLT-----LRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTV 92
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGS 545
G ++ + A+ L+ + + +GG+ +RL++ +Q G+IIG+ G
Sbjct: 93 TGILNGIADAYGLVADCLVKGAPQMG--IGGSVAAAPNTHPIRLLISHNQMGTIIGRQGL 150
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIP 604
+IK I++ SG + +MLP STER V ++G PD + +A+++I +VD +G T+
Sbjct: 151 KIKQIQDASGVRMVAQKEMLPQSTERIVEVQGTPDGIQKAVWEIGKCLVDDEQRGYGTVL 210
Query: 605 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 664
Y P + GG P A L G G + G N
Sbjct: 211 YSPSVRVGGGA----------------------PAAPLN--GTGESRGYNAPRSYNRTGN 246
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
A +S ++ PR +N GP + + ++ T+ +++P +++G +IG+
Sbjct: 247 GADFTSGAPASYPPR---RNGASEGGGGGSGPPPRVEEGEDIQTQNISIPADMVGCIIGR 303
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
GG+KI EIRK SGA I I+K+ +D+ +R T+TG P A A YL+ N+ E +R
Sbjct: 304 GGSKISEIRKSSGARISIAKAP--HDDTGERMFTITGGPQANEKALYLLYENLEQEKMR 360
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 170/340 (50%), Gaps = 38/340 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+++G + +S +R++TV G ++ + A+ L+ +
Sbjct: 52 KEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGILNGIADAYGLVADCLV 111
Query: 62 EFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
+ +GG+ +RL++ +Q G+IIG+ G +IK I++ SG + +M
Sbjct: 112 KGAPQMG--IGGSVAAAPNTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEM 169
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFG 178
LP STER V ++G PD + +A+++I +VD +G T+ Y P + GG
Sbjct: 170 LPQSTERIVEVQGTPDGIQKAVWEIGKCLVDDEQRGYGTVLYSPSVRVGGGA-------- 221
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
P A L G G + G N A +S ++ PR +
Sbjct: 222 --------------PAAPLN--GTGESRGYNAPRSYNRTGNGADFTSGAPASYPPR---R 262
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
N GP + + ++ T+ +++P +++G +IG+GG+KI EIRK SGA I I+
Sbjct: 263 NGASEGGGGGSGPPPRVEEGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIA 322
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
K+ +D+ +R T+TG P A A YL+ N+ E +R
Sbjct: 323 KAP--HDDTGERMFTITGGPQANEKALYLLYENLEQEKMR 360
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 45/256 (17%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ + + +G +IG+ G KI +I+ SG +R+ E S +R + + GTPD I A
Sbjct: 133 RLLISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLPQSTERIVEVQGTPDGIQKA 190
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
+ E+ + ++ E G + +S + AP A LN +
Sbjct: 191 VW------EIGKCLVDDEQRGYGTVL-YSPSVRVGGGAPAAPLNGTG------------- 230
Query: 385 TKPGALNALTSLSALGGLSDLLGG----------GSSGGGSGNSGGFGGVPQGPNYANIQ 434
+ NA S + G +D G G+S GG G SG V +G +IQ
Sbjct: 231 -ESRGYNAPRSYNRTGNGADFTSGAPASYPPRRNGASEGGGGGSGPPPRVEEG---EDIQ 286
Query: 435 TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSM 491
T + + VG IIG+ G + ++R+ SG++I I+ + T ER+ T+ G
Sbjct: 287 TQNIS------IPADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDDTGERMFTITGGP 340
Query: 492 DSLFRAFSLITKNIEE 507
+ +A L+ +N+E+
Sbjct: 341 QANEKALYLLYENLEQ 356
>gi|238487586|ref|XP_002375031.1| KH domain RNA binding protein [Aspergillus flavus NRRL3357]
gi|317143475|ref|XP_001819500.2| KH domain RNA binding protein [Aspergillus oryzae RIB40]
gi|220699910|gb|EED56249.1| KH domain RNA binding protein [Aspergillus flavus NRRL3357]
Length = 468
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 180/368 (48%), Gaps = 47/368 (12%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 112 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAF 171
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGG +I+ I+E SGA +
Sbjct: 172 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGGRIREIQEASGARL 227
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 228 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 287
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G ++ N AG A G+ G
Sbjct: 288 AVPGGMQVVPY--VPQPAGG------QYGHPDTFKRHHPHPNRAAAG--AYGVPYLHGQP 337
Query: 655 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKT----NQQQNQITKE 710
+ A+ + Q P R GP+ +T++
Sbjct: 338 APAPVAQPAMHYGGAPQPYAGAGPHQPAPYGAPQAAPARGGPTPVAPVGGAMPGQPLTQQ 397
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A
Sbjct: 398 IYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMAL 454
Query: 771 YLINMSVE 778
Y++ +E
Sbjct: 455 YMLYSRLE 462
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 177/363 (48%), Gaps = 47/363 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI +
Sbjct: 117 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIR 176
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGG +I+ I+E SGA + +
Sbjct: 177 TL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGGRIREIQEASGARLNASDA 232
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA--------------- 156
LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 233 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGG 292
Query: 157 --TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
+PY +PQ AGG Q+G ++ N AG A G+ G +
Sbjct: 293 MQVVPY--VPQPAGG------QYGHPDTFKRHHPHPNRAAAG--AYGVPYLHGQPAPAPV 342
Query: 215 NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKT----NQQQNQITKEMTVPN 270
A+ + Q P R GP+ +T+++ +PN
Sbjct: 343 AQPAMHYGGAPQPYAGAGPHQPAPYGAPQAAPARGGPTPVAPVGGAMPGQPLTQQIYIPN 402
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A Y++
Sbjct: 403 DMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMALYMLYS 459
Query: 331 SVE 333
+E
Sbjct: 460 RLE 462
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 100 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 151
Query: 122 NSTEREVNIKGVPDAVTQAI 141
+ ER + + G DAV +A
Sbjct: 152 GAVERILTVSGPQDAVAKAF 171
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 100 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 151
Query: 567 NSTEREVNIKGVPDAVTQAI 586
+ ER + + G DAV +A
Sbjct: 152 GAVERILTVSGPQDAVAKAF 171
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 171/344 (49%), Gaps = 47/344 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + RA++
Sbjct: 40 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARAYA 99
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
L+ K + E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 100 LVAKGLLEGAPQMG--MGGIVNNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASG 154
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +A+++I ++D +G TI Y P + + G
Sbjct: 155 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVG 214
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
N + N P G G + G GG
Sbjct: 215 GSTSMNTSSVGNGYSSRP---------YNRTGNGADFSDGQSGGYG-------------- 251
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
R N + +NR P + ++ Q T+ +++P +++G +IG+GG+KI EIR+
Sbjct: 252 ----RRSNPDT-----SNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRGGSKITEIRR 301
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
SGA I I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 302 SSGARISIAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 343
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 167/337 (49%), Gaps = 47/337 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + RA++L+ K +
Sbjct: 47 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARAYALVAKGLL 106
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 107 EGAPQMG--MGGIVNNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQK 161
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++I ++D +G TI Y P + + G N
Sbjct: 162 EMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVGGSTSMNT 221
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+ N P G G + G GG R
Sbjct: 222 SSVGNGYSSRP---------YNRTGNGADFSDGQSGGYG------------------RRS 254
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + +NR P + ++ Q T+ +++P +++G +IG+GG+KI EIR+ SGA I
Sbjct: 255 NPDT-----SNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRGGSKITEIRRSSGARIS 308
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 309 IAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 343
>gi|407924223|gb|EKG17277.1| K-like protein [Macrophomina phaseolina MS6]
Length = 357
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 178/361 (49%), Gaps = 57/361 (15%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V LR+E+G + +S +R++T
Sbjct: 39 EYAQAQLT-----LRAIVSSKEAGVIIGKAGQNVANLRDETGVRAGVSKVVPGVHDRVLT 93
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGS 545
V G++ + +A+ L+ K + E + +GG S +RL++ +Q G+IIG+ G
Sbjct: 94 VTGALSGISKAYHLVAKGLLEGAPSVG--MGGVINTSGTHPVRLLISHNQMGTIIGRAGL 151
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIP 604
+IK I++ SG + +MLP STER V I+G P+ + +A ++I ++D +G T+
Sbjct: 152 KIKQIQDASGVRMVAQKEMLPQSTERIVEIQGTPEGIEKATWEIGKCLIDDHERGYGTVL 211
Query: 605 YRPLPQ-NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
Y P + AG G + N G GN G N +
Sbjct: 212 YNPAVRVQAGTTGPVTN-------------------------GFTGNRSYNRTGHGNDFS 246
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQI-TKEMTVPNELIGAVI 722
+ S + ++ R P T + +I T+ +++P++++G +I
Sbjct: 247 DSPTYSRRSGSDAASRP---------------PMPTTTEDGEEIQTQNISIPSDMVGCII 291
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELL 780
G+GG+KI EIRK SGA I I+K+ +E + +R T+ G+P + A YL+ N+ E +
Sbjct: 292 GRGGSKISEIRKSSGARISIAKAPHDE--TGERMFTIMGSPSSNEKALYLLYENLEAEKM 349
Query: 781 R 781
R
Sbjct: 350 R 350
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 170/341 (49%), Gaps = 52/341 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G + +S +R++TV G++ + +A+ L+ K +
Sbjct: 54 KEAGVIIGKAGQNVANLRDETGVRAGVSKVVPGVHDRVLTVTGALSGISKAYHLVAKGLL 113
Query: 62 EFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + +GG S +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 114 EGAPSVG--MGGVINTSGTHPVRLLISHNQMGTIIGRAGLKIKQIQDASGVRMVAQKEML 171
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQ-NAGGPGLIGNQFG 178
P STER V I+G P+ + +A ++I ++D +G T+ Y P + AG G + N
Sbjct: 172 PQSTERIVEIQGTPEGIEKATWEIGKCLIDDHERGYGTVLYNPAVRVQAGTTGPVTN--- 228
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
G GN G N + + S + ++ R
Sbjct: 229 ----------------------GFTGNRSYNRTGHGNDFSDSPTYSRRSGSDAASRP--- 263
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
P T + +I T+ +++P++++G +IG+GG+KI EIRK SGA I I
Sbjct: 264 ------------PMPTTTEDGEEIQTQNISIPSDMVGCIIGRGGSKISEIRKSSGARISI 311
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
+K+ +E + +R T+ G+P + A YL+ N+ E +R
Sbjct: 312 AKAPHDE--TGERMFTIMGSPSSNEKALYLLYENLEAEKMR 350
>gi|349802451|gb|AEQ16698.1| putative poly(rC)-binding protein 2 isoform g [Pipa carvalhoi]
Length = 207
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 72/88 (81%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DMLPNSTER + I G+P ++ +
Sbjct: 16 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 75
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNA 167
+ QIC++M++SPPKG TIPYRP P ++
Sbjct: 76 CVKQICVVMLESPPKGVTIPYRPKPSSS 103
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 72/88 (81%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DMLPNSTER + I G+P ++ +
Sbjct: 16 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 75
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNA 612
+ QIC++M++SPPKG TIPYRP P ++
Sbjct: 76 CVKQICVVMLESPPKGVTIPYRPKPSSS 103
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+
Sbjct: 131 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN---PVEGSTDRQVTITGSTASIS 187
Query: 323 LAQYLINM 330
LAQYLIN+
Sbjct: 188 LAQYLINV 195
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+
Sbjct: 131 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN---PVEGSTDRQVTITGSTASIS 187
Query: 768 LAQYLINM 775
LAQYLIN+
Sbjct: 188 LAQYLINV 195
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 30/177 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK G +K++RE +G+++ ++ P ER +T+ G S+
Sbjct: 18 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 77
Query: 499 SLIT--------KNIEEFHKNQNK-----HLGG-------------NGESQLIQLRLIVP 532
I K + ++ + GG + +Q L +P
Sbjct: 78 KQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGAYTIQGQAIPQPIDASAQTTSHELTIP 137
Query: 533 ASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
G IIG+ G++I IR+ SGA + +A + + ST+R+V I G +++ A Y I
Sbjct: 138 NDLIGCIIGRQGAKINEIRQMSGAQIKIA-NPVEGSTDRQVTITGSTASISLAQYLI 193
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 30/169 (17%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT---- 57
+ GS+IGK G +K++RE +G+++ ++ P ER +T+ G S+ I
Sbjct: 26 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 85
Query: 58 ----KNIEEFHKNQNK-----HLGG-------------NGESQLIQLRLIVPASQCGSII 95
K + ++ + GG + +Q L +P G II
Sbjct: 86 ESPPKGVTIPYRPKPSSSPVIFAGGAYTIQGQAIPQPIDASAQTTSHELTIPNDLIGCII 145
Query: 96 GKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
G+ G++I IR+ SGA + +A + + ST+R+V I G +++ A Y I
Sbjct: 146 GRQGAKINEIRQMSGAQIKIA-NPVEGSTDRQVTITGSTASISLAQYLI 193
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 16 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 73
Query: 322 --ALAQYLINM 330
+ Q + M
Sbjct: 74 IECVKQICVVM 84
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 16 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 73
Query: 767 --ALAQYLINM 775
+ Q + M
Sbjct: 74 IECVKQICVVM 84
>gi|83767359|dbj|BAE57498.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864064|gb|EIT73362.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 482
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 178/363 (49%), Gaps = 47/363 (12%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 112 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAF 171
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGG +I+ I+E SGA +
Sbjct: 172 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGGRIREIQEASGARL 227
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 228 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 287
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G ++ N AG A G+ G
Sbjct: 288 AVPGGMQVVPY--VPQPAGG------QYGHPDTFKRHHPHPNRAAAG--AYGVPYLHGQP 337
Query: 655 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKT----NQQQNQITKE 710
+ A+ + Q P R GP+ +T++
Sbjct: 338 APAPVAQPAMHYGGAPQPYAGAGPHQPAPYGAPQAAPARGGPTPVAPVGGAMPGQPLTQQ 397
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A
Sbjct: 398 IYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMAL 454
Query: 771 YLI 773
Y++
Sbjct: 455 YML 457
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 175/358 (48%), Gaps = 47/358 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI +
Sbjct: 117 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIR 176
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGG +I+ I+E SGA + +
Sbjct: 177 TL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGGRIREIQEASGARLNASDA 232
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA--------------- 156
LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 233 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGG 292
Query: 157 --TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
+PY +PQ AGG Q+G ++ N AG A G+ G +
Sbjct: 293 MQVVPY--VPQPAGG------QYGHPDTFKRHHPHPNRAAAG--AYGVPYLHGQPAPAPV 342
Query: 215 NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKT----NQQQNQITKEMTVPN 270
A+ + Q P R GP+ +T+++ +PN
Sbjct: 343 AQPAMHYGGAPQPYAGAGPHQPAPYGAPQAAPARGGPTPVAPVGGAMPGQPLTQQIYIPN 402
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A Y++
Sbjct: 403 DMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMALYML 457
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 100 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 151
Query: 122 NSTEREVNIKGVPDAVTQAI 141
+ ER + + G DAV +A
Sbjct: 152 GAVERILTVSGPQDAVAKAF 171
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 100 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 151
Query: 567 NSTEREVNIKGVPDAVTQAI 586
+ ER + + G DAV +A
Sbjct: 152 GAVERILTVSGPQDAVAKAF 171
>gi|402592326|gb|EJW86255.1| hypothetical protein WUBG_02833 [Wuchereria bancrofti]
Length = 313
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 168/334 (50%), Gaps = 65/334 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ + G+IIGK GE+VK ++ E + + + DS TPER+V ++ +++++ + +I
Sbjct: 42 LRLLVTSRGAGAIIGKKGESVKNIQTECDATVSVPDSQTPERVVQLVAAVENVVKCVEMI 101
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
I+E H NQ++ +L+++V S G++IG+GGS+IK +RE +G + V
Sbjct: 102 IARIDEVHDNQDRDS---------ELKVLVHQSHAGAVIGRGGSRIKELREENGVDLKVY 152
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
S+ P STER + I G P+ + + I + + P KG + PY + + ++ N+
Sbjct: 153 SECCPQSTERIIQINGKPEKIVACLVTIINTLKEIPIKGPSRPYESIFFDP----MVANE 208
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
+G G A G +SG GM G + + +
Sbjct: 209 YG-----------------GYA----GDHSGRGMRGYGPRGRIPLPPYGSVPPAY----- 242
Query: 682 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
DGP + T ++TVPNEL G +IG+GG +I IR SGA I+
Sbjct: 243 -----------DDGPLE---------TAQVTVPNELGGTIIGRGGERIRRIRDESGAHIK 282
Query: 742 ISKSSEEEEDSN-DRTITMTGTPDAIALAQYLIN 774
I EEED N +R IT++GTP I +AQ+L+
Sbjct: 283 I-----EEEDPNGERIITISGTPSQIEMAQFLLQ 311
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 163/324 (50%), Gaps = 65/324 (20%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G+IIGK GE+VK ++ E + + + DS TPER+V ++ +++++ + +I I+E H N
Sbjct: 52 GAIIGKKGESVKNIQTECDATVSVPDSQTPERVVQLVAAVENVVKCVEMIIARIDEVHDN 111
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
Q++ +L+++V S G++IG+GGS+IK +RE +G + V S+ P STER
Sbjct: 112 QDRDS---------ELKVLVHQSHAGAVIGRGGSRIKELREENGVDLKVYSECCPQSTER 162
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
+ I G P+ + + I + + P KG + PY + + ++ N++G
Sbjct: 163 IIQINGKPEKIVACLVTIINTLKEIPIKGPSRPYESIFFDP----MVANEYG-------- 210
Query: 187 PDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRN 246
G A G +SG GM G + + +
Sbjct: 211 ---------GYA----GDHSGRGMRGYGPRGRIPLPPYGSVPPAY--------------- 242
Query: 247 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
DGP + T ++TVPNEL G +IG+GG +I IR SGA I+I EEED
Sbjct: 243 -DDGPLE---------TAQVTVPNELGGTIIGRGGERIRRIRDESGAHIKI-----EEED 287
Query: 307 SN-DRTITMTGTPDAIALAQYLIN 329
N +R IT++GTP I +AQ+L+
Sbjct: 288 PNGERIITISGTPSQIEMAQFLLQ 311
>gi|392558575|gb|EIW51762.1| hypothetical protein TRAVEDRAFT_156921 [Trametes versicolor
FP-101664 SS1]
Length = 378
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 172/362 (47%), Gaps = 74/362 (20%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK+G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 64 HMRCLIVTQDASIIIGKAGSHVNEIREKSGARVVVSESIPGNPERILNVSGPLDAVSKAF 123
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I + ++ G S+ + ++ ++P S+ GS+IGKGG++IK I+E SGA +
Sbjct: 124 GLIVRRINDEPFDKPSVPG----SRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEASGARL 179
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI---PYRPLPQNAGGP 615
+ MLP STER +++ GV DA+ A Y I I++++ + T YRP
Sbjct: 180 NASETMLPGSTERLLSVSGVADAIHIATYYIGNILIEANERMPTTNNSSYRP-------- 231
Query: 616 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
+ + ++ + G P +G ++
Sbjct: 232 ----SSYQASSAPPSSTPRGRPPYSG--------------------------------SS 255
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
++P QN P + Q QI +PN+L+G +IGKGG KI EIR +
Sbjct: 256 YVPGGYGQNPYAPAAPAAPAPGPPSQLQTQQI----YIPNDLVGCIIGKGGAKINEIRHM 311
Query: 736 SGAMIRISK----------SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 785
S + I+I + ++ +R + +TG P I M+V+LL + L
Sbjct: 312 SASQIKIMEPGAVGVGLNGAAAPAGSEGERLVVITGQPAN-------IQMAVQLLYSRLE 364
Query: 786 GE 787
E
Sbjct: 365 QE 366
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 166/349 (47%), Gaps = 74/349 (21%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK+G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 77 IIGKAGSHVNEIREKSGARVVVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 136
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
+ G S+ + ++ ++P S+ GS+IGKGG++IK I+E SGA + + MLP STER
Sbjct: 137 KPSVPG----SRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEASGARLNASETMLPGSTER 192
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGATI---PYRPLPQNAGGPGLIGNQFGMQNSL 183
+++ GV DA+ A Y I I++++ + T YRP + + ++
Sbjct: 193 LLSVSGVADAIHIATYYIGNILIEANERMPTTNNSSYRP------------SSYQASSAP 240
Query: 184 MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQH 243
+ G P +G ++++P QN
Sbjct: 241 PSSTPRGRPPYSG--------------------------------SSYVPGGYGQNPYAP 268
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK---- 299
P + Q QI +PN+L+G +IGKGG KI EIR +S + I+I +
Sbjct: 269 AAPAAPAPGPPSQLQTQQI----YIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAV 324
Query: 300 ------SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 342
++ +R + +TG P I M+V+LL + L E
Sbjct: 325 GVGLNGAAAPAGSEGERLVVITGQPAN-------IQMAVQLLYSRLEQE 366
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGK GS + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 63 IHMRCLIVTQDASIIIGKAGSHVNEIREKSGARV-VVSESIPGNPERILNVSGPLDAVSK 121
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
A I + D P ++P G + +F + NS MG+
Sbjct: 122 AFGLIVRRINDEPFDKPSVP---------GSRAVTIKFMIPNSRMGS 159
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 171/344 (49%), Gaps = 47/344 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + RA++
Sbjct: 45 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARAYA 104
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
L+ K + E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 105 LVAKGLLEGAPQMG--MGGIVNNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASG 159
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +A+++I ++D +G TI Y P + + G
Sbjct: 160 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVG 219
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
N + N P G G + G GG
Sbjct: 220 GSTSMNTSSVGNGYNSRP---------YNRTGNGADFSDGQSGGYG-------------- 256
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
R N + +NR P + ++ Q T+ +++P +++G +IG+GG+KI EIR+
Sbjct: 257 ----RRSNPDT-----SNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRGGSKITEIRR 306
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
SGA I I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 307 SSGARISIAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 348
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 167/337 (49%), Gaps = 47/337 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + RA++L+ K +
Sbjct: 52 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARAYALVAKGLL 111
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 112 EGAPQMG--MGGIVNNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQK 166
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++I ++D +G TI Y P + + G N
Sbjct: 167 EMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVGGSTSMNT 226
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+ N P G G + G GG R
Sbjct: 227 SSVGNGYNSRP---------YNRTGNGADFSDGQSGGYG------------------RRS 259
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + +NR P + ++ Q T+ +++P +++G +IG+GG+KI EIR+ SGA I
Sbjct: 260 NPDT-----SNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRGGSKITEIRRSSGARIS 313
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 314 IAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 348
>gi|355733298|gb|AES10985.1| poly binding protein 2 [Mustela putorius furo]
Length = 148
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMI 87
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA
Sbjct: 88 IDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA 146
Query: 562 SD 563
D
Sbjct: 147 GD 148
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 32 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 91
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA D
Sbjct: 92 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 148
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 82
Query: 140 AIYQI 144
A I
Sbjct: 83 AFAMI 87
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 82
Query: 585 AIYQI 589
A I
Sbjct: 83 AFAMI 87
>gi|449304748|gb|EMD00755.1| hypothetical protein BAUCODRAFT_60994 [Baudoinia compniacensis UAMH
10762]
Length = 333
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 169/367 (46%), Gaps = 68/367 (18%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V +LR+++G + +S +R++T
Sbjct: 12 EYAQAQIT-----LRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSKVVPGVHDRVLT 66
Query: 487 VIGSMDSLFRAFSLITKNIEE---------FHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
V G + + A+ L+ + + N N H +RL++ +Q G
Sbjct: 67 VTGPLTGISEAYGLVADGLVKGAPQMGMGGVVANPNTH----------PIRLLISHNQMG 116
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+IIG+ G +IK I++ SG + +MLP STER V I+G PD V +A+++I ++D
Sbjct: 117 TIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEIQGTPDGVQKAVWEIGKCLIDDQ 176
Query: 598 PKG-ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
+G T+ Y P + G P + G G G
Sbjct: 177 ERGYGTVLYSPAVRVQGA----------------------APTPAMNGTGYGAPRGYNRT 214
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
G N A + + + P + GP ++ T+ +++P +
Sbjct: 215 G--NGADFTGSGAPYQRRSTGPSDT-------------GPPPAVEDGEDIQTQNISIPAD 259
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--N 774
++G +IG+GG+KI EIRK SGA I I+K+ +D+ +R T+TG A A YL+ N
Sbjct: 260 MVGCIIGRGGSKISEIRKSSGARISIAKAP--HDDTGERMFTITGGQTANEKALYLLYEN 317
Query: 775 MSVELLR 781
+ E +R
Sbjct: 318 LEAEKMR 324
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 161/347 (46%), Gaps = 63/347 (18%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V +LR+++G + +S +R++TV G + + A+ L+ +
Sbjct: 27 KEAGVIIGKAGQNVAELRDKTGVRAGVSKVVPGVHDRVLTVTGPLTGISEAYGLVADGLV 86
Query: 62 E---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
+ N N H +RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 87 KGAPQMGMGGVVANPNTH----------PIRLLISHNQMGTIIGRQGLKIKQIQDASGVR 136
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPG 171
+ +MLP STER V I+G PD V +A+++I ++D +G T+ Y P + G
Sbjct: 137 MVAQKEMLPQSTERIVEIQGTPDGVQKAVWEIGKCLIDDQERGYGTVLYSPAVRVQGA-- 194
Query: 172 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 231
P + G G G G N A + + +
Sbjct: 195 --------------------APTPAMNGTGYGAPRGYNRTG--NGADFTGSGAPYQRRST 232
Query: 232 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
P + GP ++ T+ +++P +++G +IG+GG+KI EIRK S
Sbjct: 233 GPSDT-------------GPPPAVEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSS 279
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
GA I I+K+ +D+ +R T+TG A A YL+ N+ E +R
Sbjct: 280 GARISIAKAP--HDDTGERMFTITGGQTANEKALYLLYENLEAEKMR 324
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 246 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 305
N +DGP + Q QIT V ++ G +IGK G + E+R +G +SK
Sbjct: 2 NTQDGPRTEEEYAQAQITLRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSKVV---P 58
Query: 306 DSNDRTITMTGTPDAIALAQYLI 328
+DR +T+TG I+ A L+
Sbjct: 59 GVHDRVLTVTGPLTGISEAYGLV 81
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 691 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 750
N +DGP + Q QIT V ++ G +IGK G + E+R +G +SK
Sbjct: 2 NTQDGPRTEEEYAQAQITLRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSKVV---P 58
Query: 751 DSNDRTITMTGTPDAIALAQYLI 773
+DR +T+TG I+ A L+
Sbjct: 59 GVHDRVLTVTGPLTGISEAYGLV 81
>gi|326470883|gb|EGD94892.1| KH domain RNA-binding protein [Trichophyton tonsurans CBS 112818]
gi|326478447|gb|EGE02457.1| KH domain RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 367
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 173/349 (49%), Gaps = 47/349 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYS 109
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
++ K++ E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 110 IVAKSLLEGAPQMG--MGGVVQNNGTHSV---RLLISHNQMGTIIGRQGLKIKYIQDASG 164
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +AI++I ++D +G T+ Y P + +
Sbjct: 165 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRAS-- 222
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
A GG+S G N A + SS
Sbjct: 223 ----------------VGSSSGQGSVTGTATSYGGSSRSYNRTG-NGADFSDHPSS---- 261
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ R N N N+ G T + T+ +++P++++G +IG+GGTKI EIR+
Sbjct: 262 -YSRRGNNDNPNR-------GIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRR 313
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
SGA I I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 314 SSGARISIAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 360
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 169/342 (49%), Gaps = 47/342 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S++ K++
Sbjct: 57 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYSIVAKSLL 116
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 117 EGAPQMG--MGGVVQNNGTHSV---RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQK 171
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +AI++I ++D +G T+ Y P + +
Sbjct: 172 EMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRAS--------- 222
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
A GG+S G N A + SS + R
Sbjct: 223 ---------VGSSSGQGSVTGTATSYGGSSRSYNRTG-NGADFSDHPSS-----YSRRGN 267
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N N N+ G T + T+ +++P++++G +IG+GGTKI EIR+ SGA I
Sbjct: 268 NDNPNR-------GIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARIS 320
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 321 IAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 360
>gi|327307466|ref|XP_003238424.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326458680|gb|EGD84133.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 367
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 171/349 (48%), Gaps = 47/349 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYS 109
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
++ K++ E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 110 IVAKSLLEGAPQMG--MGGVVQNNGTHSV---RLLISHNQMGTIIGRQGLKIKYIQDASG 164
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +AI++I ++D +G T+ Y P + + G
Sbjct: 165 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRASVG 224
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
N G N N A + SS
Sbjct: 225 SSSGQGSVTGTNPSYGGSSRSYNRTG-------------------NGADFSDHPSS---- 261
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ R N N N+ G T + T+ +++P++++G +IG+GGTKI EIR+
Sbjct: 262 -YSRRGNNDNPNR-------GIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRR 313
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
SGA I I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 314 SSGARISIAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 360
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 47/342 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+S++ K++
Sbjct: 57 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKAYSIVAKSLL 116
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 117 EGAPQMG--MGGVVQNNGTHSV---RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQK 171
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +AI++I ++D +G T+ Y P + + G
Sbjct: 172 EMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRASVGSSSGQGS 231
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
N G N N A + SS + R
Sbjct: 232 VTGTNPSYGGSSRSYNRTG-------------------NGADFSDHPSS-----YSRRGN 267
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N N N+ G T + T+ +++P++++G +IG+GGTKI EIR+ SGA I
Sbjct: 268 NDNPNR-------GIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARIS 320
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K+ +D+ +R T+ G+ A A YL+ N+ E +R
Sbjct: 321 IAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLEAEKMR 360
>gi|115399196|ref|XP_001215187.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192070|gb|EAU33770.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 459
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 182/369 (49%), Gaps = 49/369 (13%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 103 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAF 162
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGG +I+ I+E SGA +
Sbjct: 163 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGGRIREIQEASGARL 218
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA---------- 601
+ LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 219 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAG 278
Query: 602 -------TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+PY +PQ AGG Q+G ++ N AG A G+ G
Sbjct: 279 AVPGGMQVVPY--VPQPAGG------QYGHPDTFKRHHPHPNRGAAG--AYGVPYLHGQA 328
Query: 655 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTN-----QQQNQITK 709
+ A+ A+ P +Q R GP+ +T+
Sbjct: 329 APTPVAQPAMHYGAAPTPYAGAGP-HQPAPYPPQVPQPRGGPTPVAPVAGGAMPGQPLTQ 387
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A
Sbjct: 388 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMA 444
Query: 770 QYLINMSVE 778
Y++ +E
Sbjct: 445 LYMLYSRLE 453
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 179/364 (49%), Gaps = 49/364 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI +
Sbjct: 108 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAVAKAFGLIIR 167
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGG +I+ I+E SGA + +
Sbjct: 168 TL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGGRIREIQEASGARLNASDA 223
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS-------PPKGA--------------- 156
LP STER + I GV DAV A Y + + +V+ P A
Sbjct: 224 CLPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGG 283
Query: 157 --TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
+PY +PQ AGG Q+G ++ N AG A G+ G +
Sbjct: 284 MQVVPY--VPQPAGG------QYGHPDTFKRHHPHPNRGAAG--AYGVPYLHGQAAPTPV 333
Query: 215 NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTN-----QQQNQITKEMTVP 269
A+ A+ P +Q R GP+ +T+++ +P
Sbjct: 334 AQPAMHYGAAPTPYAGAGP-HQPAPYPPQVPQPRGGPTPVAPVAGGAMPGQPLTQQIYIP 392
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
N+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT + +A Y++
Sbjct: 393 NDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECNQMALYMLY 449
Query: 330 MSVE 333
+E
Sbjct: 450 SRLE 453
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 98 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 156
Query: 136 AVTQAI 141
AV +A
Sbjct: 157 AVAKAF 162
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES I +R ++ + + ++IGKGG + IR SGA V SD + ER + + G D
Sbjct: 98 ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGPQD 156
Query: 581 AVTQAI 586
AV +A
Sbjct: 157 AVAKAF 162
Score = 39.7 bits (91), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 242 QHNRNNRDGPSQKTNQQQNQ-----ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
Q ++ D + +T QQ+ Q I + ++ VIGKGG + +IR++SGA
Sbjct: 77 QSTASHADAGASQTEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCT 136
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+S S + +R +T++G DA+A A LI
Sbjct: 137 VSDYS---RGAVERILTVSGPQDAVAKAFGLI 165
Score = 39.7 bits (91), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 687 QHNRNNRDGPSQKTNQQQNQ-----ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 741
Q ++ D + +T QQ+ Q I + ++ VIGKGG + +IR++SGA
Sbjct: 77 QSTASHADAGASQTEQQRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCT 136
Query: 742 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+S S + +R +T++G DA+A A LI
Sbjct: 137 VSDYS---RGAVERILTVSGPQDAVAKAFGLI 165
>gi|157116844|ref|XP_001652871.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108883399|gb|EAT47624.1| AAEL001245-PA, partial [Aedes aegypti]
Length = 190
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 114/212 (53%), Gaps = 55/212 (25%)
Query: 151 SPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLA------------ 198
SPPKGATIPYRP PQ GP ++ N G ++ G + + GLA
Sbjct: 1 SPPKGATIPYRPKPQ-MNGPVIVAN--GQAYTIQGNYAVPAQEVGGLAKNPLAGLAALGL 57
Query: 199 ALGLGGNSGGGMGGG--------------------LNAAALAALASSQLKTNHMPRNQNQ 238
A + N+GG G ++ ALAALA SQL+TN
Sbjct: 58 AGAIPTNTGGLNPTGNFVELSPIYLHHPHSSPPSSVSPVALAALAGSQLRTN-------- 109
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
NNR+ SQ +Q + EMTVPN+LIG +IGKGGTKI EIR+ISGAMIRIS
Sbjct: 110 -------NNRNVQSQVQSQ-----SHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRIS 157
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
E + + DRTIT+TG PD++ALAQYLINM
Sbjct: 158 NCEERDSGNTDRTITITGNPDSVALAQYLINM 189
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 114/212 (53%), Gaps = 55/212 (25%)
Query: 596 SPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLA------------ 643
SPPKGATIPYRP PQ GP ++ N G ++ G + + GLA
Sbjct: 1 SPPKGATIPYRPKPQ-MNGPVIVAN--GQAYTIQGNYAVPAQEVGGLAKNPLAGLAALGL 57
Query: 644 ALGLGGNSGGGMGGG--------------------LNAAALAALASSQLKTNHMPRNQNQ 683
A + N+GG G ++ ALAALA SQL+TN
Sbjct: 58 AGAIPTNTGGLNPTGNFVELSPIYLHHPHSSPPSSVSPVALAALAGSQLRTN-------- 109
Query: 684 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 743
NNR+ SQ +Q + EMTVPN+LIG +IGKGGTKI EIR+ISGAMIRIS
Sbjct: 110 -------NNRNVQSQVQSQ-----SHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRIS 157
Query: 744 KSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
E + + DRTIT+TG PD++ALAQYLINM
Sbjct: 158 NCEERDSGNTDRTITITGNPDSVALAQYLINM 189
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ N N+++ +SQ + VP G IIGKGG++I IR+ SGA + +++
Sbjct: 105 QLRTNNNRNVQSQVQSQ--SHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEER 162
Query: 122 NS--TEREVNIKGVPDAVTQAIYQI 144
+S T+R + I G PD+V A Y I
Sbjct: 163 DSGNTDRTITITGNPDSVALAQYLI 187
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+ N N+++ +SQ + VP G IIGKGG++I IR+ SGA + +++
Sbjct: 105 QLRTNNNRNVQSQVQSQ--SHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEER 162
Query: 567 NS--TEREVNIKGVPDAVTQAIYQI 589
+S T+R + I G PD+V A Y I
Sbjct: 163 DSGNTDRTITITGNPDSVALAQYLI 187
>gi|322698027|gb|EFY89801.1| hypothetical protein MAC_04233 [Metarhizium acridum CQMa 102]
Length = 456
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 173/368 (47%), Gaps = 56/368 (15%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V +R+ S +K +SD ERI+TV G AF
Sbjct: 109 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGI------AF 162
Query: 499 SLITKNIEEFHKNQNKHLG--GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI + + N+ LG S+ LRL++P GSIIGKGG++I+ I+E SGA
Sbjct: 163 GLIIRTL------NNEPLGEASTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA 216
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS------------------PP 598
+ + LP S+ER + + GV DAV A Y + +++ P
Sbjct: 217 RLNASDSCLPMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSGAP 276
Query: 599 KGA------TIPYRPLPQ--NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGN 650
G+ +PY P P + G P G + M + A N
Sbjct: 277 AGSIPGGMQVVPYSPQPASGHYGRPENYGRHQDRRAHHMPPAAYPPHYPHNAAP----PN 332
Query: 651 SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKE 710
M G AA + T HMP + + GP + +T++
Sbjct: 333 PAMPMQYGGQQAAYGGAPHA---TQHMPPHVGPQPH----GGPQGPPMQHGMPGGPLTQQ 385
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT + +A
Sbjct: 386 IYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI---NEPQDNSNERLVTITGTEECNRMAL 442
Query: 771 YLINMSVE 778
Y++ +E
Sbjct: 443 YMLYSRLE 450
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 169/359 (47%), Gaps = 56/359 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V +R+ S +K +SD ERI+TV G AF LI + +
Sbjct: 118 EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGI------AFGLIIRTL-- 169
Query: 63 FHKNQNKHLG--GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
N+ LG S+ LRL++P GSIIGKGG++I+ I+E SGA + + L
Sbjct: 170 ----NNEPLGEASTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCL 225
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS------------------PPKGA------ 156
P S+ER + + GV DAV A Y + +++ P G+
Sbjct: 226 PMSSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSGAPAGSIPGGMQ 285
Query: 157 TIPYRPLPQ--NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
+PY P P + G P G + M + A N M G
Sbjct: 286 VVPYSPQPASGHYGRPENYGRHQDRRAHHMPPAAYPPHYPHNAAP----PNPAMPMQYGG 341
Query: 215 NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 274
AA + T HMP + + GP + +T+++ +PN+++G
Sbjct: 342 QQAAYGGAPHA---TQHMPPHVGPQPH----GGPQGPPMQHGMPGGPLTQQIYIPNDMVG 394
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
A+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT + +A Y++ +E
Sbjct: 395 AIIGKGGQKINEIRQMSGSVIKI---NEPQDNSNERLVTITGTEECNRMALYMLYSRLE 450
>gi|225682425|gb|EEH20709.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 364
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 191/368 (51%), Gaps = 47/368 (12%)
Query: 423 GVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SST 480
G P+GP + + +R I+ KE G IIGK+G+ V LR+E+G K +S
Sbjct: 28 GDPEGPPKSEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGV 87
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQC 536
+R++TV G + +A++++ K++ E +GG NG + RL++ +Q
Sbjct: 88 HDRVLTVTGPLQGAAKAYAIVAKSLLEGAPQLG--MGGVVSNNGTHPV---RLLISHNQM 142
Query: 537 GSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
G+IIG+ G +IK I++ SG + +MLP STER V ++G P+ + +A+++I ++D
Sbjct: 143 GTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDD 202
Query: 597 PPKGA-TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
+G T+ Y P ++ S+ GAP + N+ +G ++ G GG S
Sbjct: 203 WQRGTGTVLYNP---------------AVRASVGGAP-INNSLGSGGSSGGYGGRSYNRT 246
Query: 656 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
G G A +T R N + NR P + ++ Q T+ +++P+
Sbjct: 247 GNG---------ADFSDQTGGYSRRSNSDA-----ANRGIPLVTEDGEEVQ-TQNISIPS 291
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI-- 773
+++G +IG+GG+KI EIR+ SGA I I+K+ +E + +R T+ G+ A A YL+
Sbjct: 292 DMVGCIIGRGGSKISEIRRSSGARISIAKAPHDE--TGERMFTIMGSAAANEKALYLLYE 349
Query: 774 NMSVELLR 781
N+ E +R
Sbjct: 350 NLEAEKMR 357
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 180/342 (52%), Gaps = 47/342 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A++++ K++
Sbjct: 54 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGAAKAYAIVAKSLL 113
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 114 EGAPQLG--MGGVVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQK 168
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++I ++D +G T+ Y P
Sbjct: 169 EMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNP-------------- 214
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
++ S+ GAP + N+ +G ++ G GG S G G A +T R
Sbjct: 215 -AVRASVGGAP-INNSLGSGGSSGGYGGRSYNRTGNG---------ADFSDQTGGYSRRS 263
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + NR P + ++ Q T+ +++P++++G +IG+GG+KI EIR+ SGA I
Sbjct: 264 NSDA-----ANRGIPLVTEDGEEVQ-TQNISIPSDMVGCIIGRGGSKISEIRRSSGARIS 317
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K+ +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 318 IAKAPHDE--TGERMFTIMGSAAANEKALYLLYENLEAEKMR 357
>gi|295660901|ref|XP_002791006.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280933|gb|EEH36499.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 364
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 191/368 (51%), Gaps = 47/368 (12%)
Query: 423 GVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SST 480
G P+GP + + +R I+ KE G IIGK+G+ V LR+E+G K +S
Sbjct: 28 GDPEGPPKSEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGV 87
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQC 536
+R++TV G + +A++++ K++ E +GG NG + RL++ +Q
Sbjct: 88 HDRVLTVTGPLQGAAKAYAIVAKSLLEGAPQLG--MGGVVSNNGTHPV---RLLISHNQM 142
Query: 537 GSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
G+IIG+ G +IK I++ SG + +MLP STER V ++G P+ + +A+++I ++D
Sbjct: 143 GTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDD 202
Query: 597 PPKGA-TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
+G T+ Y P ++ S+ GAP + N+ +G ++ G GG S
Sbjct: 203 WQRGTGTVLYNP---------------AVRASVGGAP-INNSLGSGASSGGYGGRSYNRT 246
Query: 656 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
G G A +T R N + NR P + ++ Q T+ +++P+
Sbjct: 247 GNG---------ADFSDQTGGYSRRSNSDA-----ANRGIPLVTEDGEEVQ-TQNISIPS 291
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI-- 773
+++G +IG+GG+KI EIR+ SGA I I+K+ +E + +R T+ G+ A A YL+
Sbjct: 292 DMVGCIIGRGGSKISEIRRSSGARISIAKAPHDE--TGERMFTIMGSAAANEKALYLLYE 349
Query: 774 NMSVELLR 781
N+ E +R
Sbjct: 350 NLEAEKMR 357
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 180/342 (52%), Gaps = 47/342 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A++++ K++
Sbjct: 54 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGAAKAYAIVAKSLL 113
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 114 EGAPQLG--MGGVVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQK 168
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++I ++D +G T+ Y P
Sbjct: 169 EMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNP-------------- 214
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
++ S+ GAP + N+ +G ++ G GG S G G A +T R
Sbjct: 215 -AVRASVGGAP-INNSLGSGASSGGYGGRSYNRTGNG---------ADFSDQTGGYSRRS 263
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + NR P + ++ Q T+ +++P++++G +IG+GG+KI EIR+ SGA I
Sbjct: 264 NSDA-----ANRGIPLVTEDGEEVQ-TQNISIPSDMVGCIIGRGGSKISEIRRSSGARIS 317
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
I+K+ +E + +R T+ G+ A A YL+ N+ E +R
Sbjct: 318 IAKAPHDE--TGERMFTIMGSAAANEKALYLLYENLEAEKMR 357
>gi|345566886|gb|EGX49826.1| hypothetical protein AOL_s00076g710 [Arthrobotrys oligospora ATCC
24927]
Length = 379
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 175/353 (49%), Gaps = 45/353 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G++D + +A++
Sbjct: 51 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGNLDGVAKAYA 110
Query: 500 LITKNIEEFHKNQ--NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
++ + + + +G + +RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 111 MVAQTLVDSPPGAIPTTPMGTH------PVRLLISHNQMGTIIGRQGLKIKHIQDVSGVR 164
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQN----- 611
+ +MLP STER V ++G D + QAI++I +VD +G TI Y P ++
Sbjct: 165 MVAQKEMLPQSTERIVEVQGSADGIRQAIWEIGKCLVDDWQRGTGTILYNPAVRSNTSHG 224
Query: 612 -AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASS 670
P +I N G S G D N + G N + + S
Sbjct: 225 TGSSPSVISNG-GAGTS--GPTDRFTNERPNRGPVRTG-----------NGTDFSEPSPS 270
Query: 671 QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
PR + + + P+ T + T+ +++P +++G +IG+GG+KI
Sbjct: 271 ------FPRRGHSDST----SRASAPAPNTENGEELQTQNISIPADMVGCIIGRGGSKIS 320
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 781
EIRK SGA I I+K+ +D+ +R T+ G+P + A YL+ N+ E R
Sbjct: 321 EIRKSSGARISIAKAP--HDDTGERMFTIVGSPQSNEKALYLLYENLEAEKTR 371
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 171/346 (49%), Gaps = 45/346 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G++D + +A++++ + +
Sbjct: 58 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGNLDGVAKAYAMVAQTLV 117
Query: 62 EFHKNQ--NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
+ +G + +RL++ +Q G+IIG+ G +IK I++ SG + +M
Sbjct: 118 DSPPGAIPTTPMGTH------PVRLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEM 171
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQN------AGGPGL 172
LP STER V ++G D + QAI++I +VD +G TI Y P ++ P +
Sbjct: 172 LPQSTERIVEVQGSADGIRQAIWEIGKCLVDDWQRGTGTILYNPAVRSNTSHGTGSSPSV 231
Query: 173 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
I N G S G D N + G N + + S
Sbjct: 232 ISNG-GAGTS--GPTDRFTNERPNRGPVRTG-----------NGTDFSEPSPS------F 271
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
PR + + + P+ T + T+ +++P +++G +IG+GG+KI EIRK SG
Sbjct: 272 PRRGHSDST----SRASAPAPNTENGEELQTQNISIPADMVGCIIGRGGSKISEIRKSSG 327
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLR 336
A I I+K+ +D+ +R T+ G+P + A YL+ N+ E R
Sbjct: 328 ARISIAKAP--HDDTGERMFTIVGSPQSNEKALYLLYENLEAEKTR 371
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR IV + + G IIGK G + +R+ +G V S ++P +R + + G D V +
Sbjct: 49 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGV-SKVVPGVHDRVLTVTGNLDGVAK 107
Query: 140 AIYQICLIMVDSPPKGATIPYRPL 163
A + +VDSPP IP P+
Sbjct: 108 AYAMVAQTLVDSPP--GAIPTTPM 129
>gi|58266068|ref|XP_570190.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134110914|ref|XP_775921.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258587|gb|EAL21274.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226423|gb|AAW42883.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 365
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 173/346 (50%), Gaps = 37/346 (10%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFR 496
Q +R ++ KE G IIGKSG T+ +R+ +G K +S +R+++V G ++ +
Sbjct: 30 QLSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEGVAS 89
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
A++ + + + E + + L +RL++ + G++IG+ G +IK I++ SGA
Sbjct: 90 AYAEVARLLLETPLS-DSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQDMSGA 148
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGP 615
+ + +MLP STER V ++G DA+ A+ +I +++ +GA T+ Y P
Sbjct: 149 RMVASKEMLPQSTERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAGTVLYH--------P 200
Query: 616 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
G G+ AG+ A GLG + G GG+ ++AA
Sbjct: 201 GAAGD-------------------AGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDR 241
Query: 676 HMPRN---QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
R + R +GP N N T+ +++P++++G +IG+GG+KI EI
Sbjct: 242 RPSRGGSISGPSGVSGERRPSEGPQVNLN-DPNLRTQNISIPSDMVGCIIGRGGSKITEI 300
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
R++SG+ I I+K +E + +R T+ GTP+A A L+ +E
Sbjct: 301 RRLSGSRISIAKVPHDE--TGERMFTIQGTPEATERALMLLYSQLE 344
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 168/336 (50%), Gaps = 37/336 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGKSG T+ +R+ +G K +S +R+++V G ++ + A++ + + +
Sbjct: 40 KEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEGVASAYAEVARLLL 99
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E + + L +RL++ + G++IG+ G +IK I++ SGA + + +MLP
Sbjct: 100 ETPLS-DSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQDMSGARMVASKEMLP 158
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGMQ 180
STER V ++G DA+ A+ +I +++ +GA T+ Y PG G+
Sbjct: 159 QSTERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAGTVLYH--------PGAAGD----- 205
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN---QN 237
AG+ A GLG + G GG+ ++AA R
Sbjct: 206 --------------AGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDRRPSRGGSISG 251
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ R +GP N N T+ +++P++++G +IG+GG+KI EIR++SG+ I I
Sbjct: 252 PSGVSGERRPSEGPQVNLN-DPNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSRISI 310
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+K +E + +R T+ GTP+A A L+ +E
Sbjct: 311 AKVPHDE--TGERMFTIQGTPEATERALMLLYSQLE 344
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 52 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
A +L K ++E + + H G + LR +V + G IIGK G+ I TIR+++G
Sbjct: 7 ADNLSPKAVQEQLPSPDAH----GAEHQLSLRSLVSTKEAGIIIGKSGATIATIRDSTGV 62
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
V S ++ +R +++ G + V A ++ +++++P +++P P+
Sbjct: 63 KAGV-SKVVQGVQDRVLSVTGDLEGVASAYAEVARLLLETPLSDSSLPPPPV 113
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
A +L K ++E + + H G + LR +V + G IIGK G+ I TIR+++G
Sbjct: 7 ADNLSPKAVQEQLPSPDAH----GAEHQLSLRSLVSTKEAGIIIGKSGATIATIRDSTGV 62
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
V S ++ +R +++ G + V A ++ +++++P +++P P+
Sbjct: 63 KAGV-SKVVQGVQDRVLSVTGDLEGVASAYAEVARLLLETPLSDSSLPPPPV 113
>gi|405120191|gb|AFR94962.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 365
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 173/346 (50%), Gaps = 37/346 (10%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFR 496
Q +R ++ KE G IIGKSG T+ +R+ +G K +S +R+++V G ++ +
Sbjct: 30 QLSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEGVAS 89
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
A++ + + + E + + L +RL++ + G++IG+ G +IK I++ SGA
Sbjct: 90 AYAEVARLLLETPLS-DSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQDMSGA 148
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGP 615
+ + +MLP STER V ++G DA+ A+ +I +++ +GA T+ Y P
Sbjct: 149 RMVASKEMLPQSTERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAGTVLYH--------P 200
Query: 616 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
G G+ AG+ A GLG + G GG+ ++AA
Sbjct: 201 GAAGD-------------------AGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDR 241
Query: 676 HMPRN---QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
R + R +GP N N T+ +++P++++G +IG+GG+KI EI
Sbjct: 242 RPSRGGSISGPSGVSGERRPSEGPQVNLN-DPNLRTQNISIPSDMVGCIIGRGGSKITEI 300
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
R++SG+ I I+K +E + +R T+ GTP+A A L+ +E
Sbjct: 301 RRLSGSRISIAKVPHDE--TGERMFTIQGTPEATERALMLLYSQLE 344
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 168/336 (50%), Gaps = 37/336 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGKSG T+ +R+ +G K +S +R+++V G ++ + A++ + + +
Sbjct: 40 KEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEGVASAYAEVARLLL 99
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E + + L +RL++ + G++IG+ G +IK I++ SGA + + +MLP
Sbjct: 100 ETPLS-DSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQDMSGARMVASKEMLP 158
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGMQ 180
STER V ++G DA+ A+ +I +++ +GA T+ Y PG G+
Sbjct: 159 QSTERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAGTVLYH--------PGAAGD----- 205
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN---QN 237
AG+ A GLG + G GG+ ++AA R
Sbjct: 206 --------------AGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDRRPSRGGSISG 251
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ R +GP N N T+ +++P++++G +IG+GG+KI EIR++SG+ I I
Sbjct: 252 PSGVSGERRPSEGPQVNLN-DPNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSRISI 310
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+K +E + +R T+ GTP+A A L+ +E
Sbjct: 311 AKVPHDE--TGERMFTIQGTPEATERALMLLYSQLE 344
Score = 42.7 bits (99), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
G + LR +V + G IIGK G+ I TIR+++G V S ++ +R +++ G
Sbjct: 25 QGAEHQLSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGV-SKVVQGVQDRVLSVTGD 83
Query: 134 PDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
+ V A ++ +++++P +++P P+
Sbjct: 84 LEGVASAYAEVARLLLETPLSDSSLPPPPV 113
Score = 42.7 bits (99), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
G + LR +V + G IIGK G+ I TIR+++G V S ++ +R +++ G
Sbjct: 25 QGAEHQLSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGV-SKVVQGVQDRVLSVTGD 83
Query: 579 PDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
+ V A ++ +++++P +++P P+
Sbjct: 84 LEGVASAYAEVARLLLETPLSDSSLPPPPV 113
>gi|393907134|gb|EFO25357.2| hypothetical protein LOAG_03127 [Loa loa]
Length = 341
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 159/321 (49%), Gaps = 54/321 (16%)
Query: 15 ETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN 74
E +K+LR E + + + DS TPERI T++ +++++ +++T+ I + ++
Sbjct: 59 ENIKRLRSEYDANVTVPDSQTPERIATIVATIENVL---AIVTEIIPKLDDSRE------ 109
Query: 75 GES-QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
G+S + I+LR++V +S G++IG+ GS+IK ++E G + V + P STER V+IKG
Sbjct: 110 GDSNRPIELRVLVHSSHAGAVIGRQGSKIKEMKEELGVQMKVFAQCPPQSTERVVSIKGA 169
Query: 134 PDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNP 193
PD + + I ++ + P KG T PY + + G + + G M P
Sbjct: 170 PDKIIACVNHIMNMLKEIPIKGVTKPYESMFYDPSYSAEYGG-YPPDRNYRGP--MIRGP 226
Query: 194 LAGLAALGLGGNSGGGMGGG--LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP 251
+A + G N +GG L+A AL GP
Sbjct: 227 MAMTSYGNYGRNFPRQIGGRGPLSAVALPPYM--------------------------GP 260
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
+ T ++T+PNEL G +IGKGG +I +R+ SGA I + +++S +R
Sbjct: 261 EEST---------QVTIPNELGGTIIGKGGERINRVREESGAQIVVGP----QQESGERI 307
Query: 312 ITMTGTPDAIALAQYLINMSV 332
IT+TGT AI AQYL+ V
Sbjct: 308 ITITGTSTAIQTAQYLLQQCV 328
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 159/321 (49%), Gaps = 54/321 (16%)
Query: 460 ETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN 519
E +K+LR E + + + DS TPERI T++ +++++ +++T+ I + ++
Sbjct: 59 ENIKRLRSEYDANVTVPDSQTPERIATIVATIENVL---AIVTEIIPKLDDSRE------ 109
Query: 520 GES-QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
G+S + I+LR++V +S G++IG+ GS+IK ++E G + V + P STER V+IKG
Sbjct: 110 GDSNRPIELRVLVHSSHAGAVIGRQGSKIKEMKEELGVQMKVFAQCPPQSTERVVSIKGA 169
Query: 579 PDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNP 638
PD + + I ++ + P KG T PY + + G + + G M P
Sbjct: 170 PDKIIACVNHIMNMLKEIPIKGVTKPYESMFYDPSYSAEYGG-YPPDRNYRGP--MIRGP 226
Query: 639 LAGLAALGLGGNSGGGMGGG--LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP 696
+A + G N +GG L+A AL GP
Sbjct: 227 MAMTSYGNYGRNFPRQIGGRGPLSAVALPPYM--------------------------GP 260
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
+ T ++T+PNEL G +IGKGG +I +R+ SGA I + +++S +R
Sbjct: 261 EEST---------QVTIPNELGGTIIGKGGERINRVREESGAQIVVGP----QQESGERI 307
Query: 757 ITMTGTPDAIALAQYLINMSV 777
IT+TGT AI AQYL+ V
Sbjct: 308 ITITGTSTAIQTAQYLLQQCV 328
>gi|402593291|gb|EJW87218.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 359
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 162/329 (49%), Gaps = 50/329 (15%)
Query: 15 ETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN 74
E +K+LR E + + + DS TPERI T++ +++++ S++T+ I + + G+
Sbjct: 59 ENIKRLRSEYDANVTVPDSQTPERIATIVATVENVL---SIVTEIIPKLDDRTLQSREGD 115
Query: 75 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 134
++ I+LR++V +S G++IG+ GS+IK ++E G + V + P STER V+IKG P
Sbjct: 116 S-NRPIELRVLVHSSHAGAVIGRQGSKIKEMKEELGVQMKVFAQCPPQSTERVVSIKGAP 174
Query: 135 DAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPL 194
D + + I ++ + P KG T PY + + G + + G M P+
Sbjct: 175 DKILACVNHIMNMLKEIPIKGVTKPYESMFYDPSYSSEYGG-YPPDRNYRGP--MIRGPM 231
Query: 195 AGLAALGLGGNSGGGMGGG---LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP 251
A + + G G S GG L+A AL GP
Sbjct: 232 A-VTSYGNYGRSFQRQIGGRGPLSAVALPPYM--------------------------GP 264
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
+ T ++T+PNEL G +IGKGG +I +R+ SGA I + +++S +R
Sbjct: 265 EEST---------QVTIPNELGGTIIGKGGERINRVREESGAQIVVGP----QQESGERI 311
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLN 340
IT+TGT AI AQYL+ + L+ L
Sbjct: 312 ITITGTSTAIQTAQYLLQQWLVLVSLGLK 340
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 162/329 (49%), Gaps = 50/329 (15%)
Query: 460 ETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN 519
E +K+LR E + + + DS TPERI T++ +++++ S++T+ I + + G+
Sbjct: 59 ENIKRLRSEYDANVTVPDSQTPERIATIVATVENVL---SIVTEIIPKLDDRTLQSREGD 115
Query: 520 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 579
++ I+LR++V +S G++IG+ GS+IK ++E G + V + P STER V+IKG P
Sbjct: 116 S-NRPIELRVLVHSSHAGAVIGRQGSKIKEMKEELGVQMKVFAQCPPQSTERVVSIKGAP 174
Query: 580 DAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPL 639
D + + I ++ + P KG T PY + + G + + G M P+
Sbjct: 175 DKILACVNHIMNMLKEIPIKGVTKPYESMFYDPSYSSEYGG-YPPDRNYRGP--MIRGPM 231
Query: 640 AGLAALGLGGNSGGGMGGG---LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP 696
A + + G G S GG L+A AL GP
Sbjct: 232 A-VTSYGNYGRSFQRQIGGRGPLSAVALPPYM--------------------------GP 264
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
+ T ++T+PNEL G +IGKGG +I +R+ SGA I + +++S +R
Sbjct: 265 EEST---------QVTIPNELGGTIIGKGGERINRVREESGAQIVVGP----QQESGERI 311
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLN 785
IT+TGT AI AQYL+ + L+ L
Sbjct: 312 ITITGTSTAIQTAQYLLQQWLVLVSLGLK 340
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 171/345 (49%), Gaps = 48/345 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + RA++
Sbjct: 46 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARAYA 105
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
L+ K + E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 106 LVAKGLLEGAPQMG--MGGIVNNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASG 160
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +A+++I ++D +G TI Y P + + G
Sbjct: 161 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVG 220
Query: 615 PG-LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
G I N P G G + G G +
Sbjct: 221 TGSSINTNTTASNGYNSRP---------YNRTGNGADFSDGQSAGYS------------- 258
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
R N + +NR P + ++ Q T+ +++P +++G +IG+GG+KI EIR
Sbjct: 259 -----RRSNPDT-----SNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRGGSKITEIR 307
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
+ SGA I I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 308 RSSGARISIAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 350
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 167/338 (49%), Gaps = 48/338 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + RA++L+ K +
Sbjct: 53 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARAYALVAKGLL 112
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 113 EGAPQMG--MGGIVNNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQK 167
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPG-LIGN 175
+MLP STER V ++G P+ + +A+++I ++D +G TI Y P + + G G I
Sbjct: 168 EMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVGTGSSINT 227
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
N P G G + G G + R
Sbjct: 228 NTTASNGYNSRP---------YNRTGNGADFSDGQSAGYS------------------RR 260
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
N + +NR P + ++ Q T+ +++P +++G +IG+GG+KI EIR+ SGA I
Sbjct: 261 SNPDT-----SNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRGGSKITEIRRSSGARI 314
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 315 SIAKAPHDE--TGERMFTIMGSAQANEKALYLLYENLE 350
>gi|115442854|ref|XP_001218234.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
gi|114188103|gb|EAU29803.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
Length = 355
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 171/344 (49%), Gaps = 51/344 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + RA++
Sbjct: 44 LRAIVSSKEAGIIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLHGTARAYA 103
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
L+ K + E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 104 LVAKGLLEGAPQMG--MGGIVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASG 158
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +A+++I ++D +G TI Y P + + G
Sbjct: 159 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVG 218
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G +MGN G G G G + + + SS
Sbjct: 219 SGSTNT------------NMGN---------GYGSRPYNRTGNGADFSDQSGGYSS---- 253
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
R N + + DG +T QN +++P +++G +IG+ G+KI EIR+
Sbjct: 254 ----RRSNSDAGRFPMVAEDGDEIQT---QN-----ISIPADMVGCIIGRAGSKITEIRR 301
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
SGA I I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 302 SSGARISIAKAPHDE--TGERMFTIMGSAAANEKALYLLYENLE 343
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 167/337 (49%), Gaps = 51/337 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + RA++L+ K +
Sbjct: 51 KEAGIIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLHGTARAYALVAKGLL 110
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 111 EGAPQMG--MGGIVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQK 165
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++I ++D +G TI Y P + + G G
Sbjct: 166 EMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVGSGSTNT- 224
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+MGN G G G G + + + SS R
Sbjct: 225 -----------NMGN---------GYGSRPYNRTGNGADFSDQSGGYSS--------RRS 256
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + + DG +T QN +++P +++G +IG+ G+KI EIR+ SGA I
Sbjct: 257 NSDAGRFPMVAEDGDEIQT---QN-----ISIPADMVGCIIGRAGSKITEIRRSSGARIS 308
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I+K+ +E + +R T+ G+ A A YL+ ++E
Sbjct: 309 IAKAPHDE--TGERMFTIMGSAAANEKALYLLYENLE 343
>gi|358056167|dbj|GAA97907.1| hypothetical protein E5Q_04587 [Mixia osmundae IAM 14324]
Length = 531
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 187/390 (47%), Gaps = 39/390 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
MR ++ +E G +IG+ G+ V +RE++ K +S ER++TV G + + RAF
Sbjct: 145 MRALVSSREAGIVIGRQGKNVADIREKAQVKAGVSKLVPGVSERVLTVTGQISGVARAFG 204
Query: 500 LITKNIEE-----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
LI + I + + + + + G +G + + LRL++ ++Q G +IGK G++IK+I++TS
Sbjct: 205 LICQTIMDNSSGIPNDSPSTYTGLSGST--LTLRLLISSAQMGGVIGKAGTKIKSIQQTS 262
Query: 555 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAG 613
G + + ++LP STER V I G P+ V +A+ +I +V+ K TI + P N
Sbjct: 263 GTRMAASKELLPQSTERLVEISGRPEQVEKAVAEIAKALVEDEAKAVGTIAFHPANLNPE 322
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ-- 671
GL M++S G G A + + AA A A
Sbjct: 323 LSGLQSIPPIMRSSSSGTASRAPAASDGRAPGMMSMQQPHQQPQHMYPAAYAQHAQPAPA 382
Query: 672 --------LKTNHMPRNQNQNQNQHNRNN--RDGPSQKTNQ-----------QQNQITKE 710
+H P + Q R N R+ P + N T+
Sbjct: 383 PAAAPLYGYTNDHAPPPRRYVPPQGYRANDPRNTPQDRYRANASIASAAHAPDPNLRTQN 442
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+++P++++G +IGKGG KI +IRK SG+ I I+K++ +E + +R T+TGT A
Sbjct: 443 ISIPSDMVGCIIGKGGQKINDIRKSSGSKISIAKTAHDE--TGERMFTITGTAQNNETAL 500
Query: 771 YLINMSVE---LLRANLNGEGG-GESNMDD 796
+L+ +E R ++ EGG G DD
Sbjct: 501 FLLYGQLENEKERRLRMDEEGGVGRQRRDD 530
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 183/383 (47%), Gaps = 39/383 (10%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
+E G +IG+ G+ V +RE++ K +S ER++TV G + + RAF LI + I
Sbjct: 152 REAGIVIGRQGKNVADIREKAQVKAGVSKLVPGVSERVLTVTGQISGVARAFGLICQTIM 211
Query: 62 E-----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
+ + + + + G +G + + LRL++ ++Q G +IGK G++IK+I++TSG + +
Sbjct: 212 DNSSGIPNDSPSTYTGLSGST--LTLRLLISSAQMGGVIGKAGTKIKSIQQTSGTRMAAS 269
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGN 175
++LP STER V I G P+ V +A+ +I +V+ K TI + P N GL
Sbjct: 270 KELLPQSTERLVEISGRPEQVEKAVAEIAKALVEDEAKAVGTIAFHPANLNPELSGLQSI 329
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ--------- 226
M++S G G A + + AA A A
Sbjct: 330 PPIMRSSSSGTASRAPAASDGRAPGMMSMQQPHQQPQHMYPAAYAQHAQPAPAPAAAPLY 389
Query: 227 -LKTNHMPRNQNQNQNQHNRNN--RDGPSQKTNQ-----------QQNQITKEMTVPNEL 272
+H P + Q R N R+ P + N T+ +++P+++
Sbjct: 390 GYTNDHAPPPRRYVPPQGYRANDPRNTPQDRYRANASIASAAHAPDPNLRTQNISIPSDM 449
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G +IGKGG KI +IRK SG+ I I+K++ +E + +R T+TGT A +L+ +
Sbjct: 450 VGCIIGKGGQKINDIRKSSGSKISIAKTAHDE--TGERMFTITGTAQNNETALFLLYGQL 507
Query: 333 E---LLRANLNGEGG-GESNMDD 351
E R ++ EGG G DD
Sbjct: 508 ENEKERRLRMDEEGGVGRQRRDD 530
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
D PS T + +T + + + +G VIGK GTKI I++ SG R++ S E S
Sbjct: 220 DSPSTYTGLSGSTLTLRLLISSAQMGGVIGKAGTKIKSIQQTSGT--RMAASKELLPQST 277
Query: 309 DRTITMTGTPDAI-----ALAQYLINM------SVELLRANLNGEGGGESNMDDF--SSD 355
+R + ++G P+ + +A+ L+ ++ ANLN E G ++ SS
Sbjct: 278 ERLVEISGRPEQVEKAVAEIAKALVEDEAKAVGTIAFHPANLNPELSGLQSIPPIMRSSS 337
Query: 356 NNLPSSAPLA 365
+ S AP A
Sbjct: 338 SGTASRAPAA 347
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 694 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
D PS T + +T + + + +G VIGK GTKI I++ SG R++ S E S
Sbjct: 220 DSPSTYTGLSGSTLTLRLLISSAQMGGVIGKAGTKIKSIQQTSGT--RMAASKELLPQST 277
Query: 754 DRTITMTGTPDAI-----ALAQYLINM------SVELLRANLNGEGGGESNMDDF--SSD 800
+R + ++G P+ + +A+ L+ ++ ANLN E G ++ SS
Sbjct: 278 ERLVEISGRPEQVEKAVAEIAKALVEDEAKAVGTIAFHPANLNPELSGLQSIPPIMRSSS 337
Query: 801 NNLPSSAPLA 810
+ S AP A
Sbjct: 338 SGTASRAPAA 347
>gi|409083451|gb|EKM83808.1| hypothetical protein AGABI1DRAFT_117279 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 340
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 172/343 (50%), Gaps = 55/343 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V LRE++G K +S ER++TV GS+D++ +A++
Sbjct: 27 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSGSVDAVAKAYT 86
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + + + + + +RL++ + G+IIG+ G +IK I++ SGA +
Sbjct: 87 LIITQL--VTASPASPVVSSPSTVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMV 144
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLI 618
+ +MLP STER V ++G P+A+ +A+ +I +++ +G T+ + PG +
Sbjct: 145 ASKEMLPQSTERIVEVQGAPEAIGRAVEEIGKCLLEDWERGLGTVLFH--------PGTV 196
Query: 619 GNQFG---MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
++ G Q S +P G A N G + A AS
Sbjct: 197 DDRSGGNRRQGSYSASPQYGAQRRA---------NGDGN---------VRARASPPASPT 238
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
H P + N +N +++P++++G +IG+ GTKI EIR++
Sbjct: 239 HSPISSQPPANLRTQN-------------------ISIPSDMVGCIIGRSGTKITEIRRL 279
Query: 736 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
SG+ I I+K+ +E + +R T+ GTP+A A +L+ +E
Sbjct: 280 SGSKISIAKAPHDE--TGERMFTIVGTPEANEKALFLLYNQLE 320
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 168/336 (50%), Gaps = 55/336 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V LRE++G K +S ER++TV GS+D++ +A++LI +
Sbjct: 34 KDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSGSVDAVAKAYTLIITQL- 92
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ + + + +RL++ + G+IIG+ G +IK I++ SGA + + +MLP
Sbjct: 93 -VTASPASPVVSSPSTVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMVASKEMLP 151
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFG-- 178
STER V ++G P+A+ +A+ +I +++ +G T+ + PG + ++ G
Sbjct: 152 QSTERIVEVQGAPEAIGRAVEEIGKCLLEDWERGLGTVLFH--------PGTVDDRSGGN 203
Query: 179 -MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
Q S +P G A N G + A AS H P +
Sbjct: 204 RRQGSYSASPQYGAQRRA---------NGDGN---------VRARASPPASPTHSPISSQ 245
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
N +N +++P++++G +IG+ GTKI EIR++SG+ I I
Sbjct: 246 PPANLRTQN-------------------ISIPSDMVGCIIGRSGTKITEIRRLSGSKISI 286
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+K+ +E + +R T+ GTP+A A +L+ +E
Sbjct: 287 AKAPHDE--TGERMFTIVGTPEANEKALFLLYNQLE 320
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 105/260 (40%), Gaps = 70/260 (26%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ + + L+G +IG+ G KI I+ SGA R+ S E S +R + + G P+AI A
Sbjct: 113 RLLISHNLMGTIIGRNGLKIKAIQDNSGA--RMVASKEMLPQSTERIVEVQGAPEAIGRA 170
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
VE + G+ ++D+ L +L
Sbjct: 171 -------VEEI---------GKCLLEDWERG------------------------LGTVL 190
Query: 385 TKPGALNALT-------SLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNY------- 430
PG ++ + S SA S G G GN P P +
Sbjct: 191 FHPGTVDDRSGGNRRQGSYSA----SPQYGAQRRANGDGNVRARASPPASPTHSPISSQP 246
Query: 431 -ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVT 486
AN++T + + VG IIG+SG + ++R SGSKI I+ + T ER+ T
Sbjct: 247 PANLRTQNIS------IPSDMVGCIIGRSGTKITEIRRLSGSKISIAKAPHDETGERMFT 300
Query: 487 VIGSMDSLFRAFSLITKNIE 506
++G+ ++ +A L+ +E
Sbjct: 301 IVGTPEANEKALFLLYNQLE 320
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR +V G IIGK G + +RE +G V S ++P ER + + G DAV +
Sbjct: 25 LTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGV-SKVIPGVHERVLTVSGSVDAVAK 83
Query: 140 AIYQICLIMVDSPPKGATI 158
A I +V + P +
Sbjct: 84 AYTLIITQLVTASPASPVV 102
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR +V G IIGK G + +RE +G V S ++P ER + + G DAV +
Sbjct: 25 LTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGV-SKVIPGVHERVLTVSGSVDAVAK 83
Query: 585 AIYQICLIMVDSPPKGATI 603
A I +V + P +
Sbjct: 84 AYTLIITQLVTASPASPVV 102
>gi|353243541|emb|CCA75070.1| related to poly(rC)-binding protein 3 [Piriformospora indica DSM
11827]
Length = 631
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 176/355 (49%), Gaps = 40/355 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V LRE++G K +S + ER+++V GS+ + +A++
Sbjct: 280 LRALVGTKDAGIIIGKAGKNVADLREQTGVKAGVSKVVAGVHERVLSVTGSVQGVAKAYT 339
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
I + + + +I RL++ + G+IIG+ G +IK I+++SGA +
Sbjct: 340 TILQQLVTSSPSSTTAPANPSNHTII--RLLISHNLMGTIIGRNGLKIKNIQDSSGARMV 397
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLI 618
DMLP STER V ++G P+A+ +AI +I +++ +G T+ Y+P AGGP I
Sbjct: 398 AQKDMLPQSTERIVEVQGSPEAIGKAIEEIGKCLLEDWERGLGTVLYQP---GAGGPDAI 454
Query: 619 GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP 678
N S G+ NP S + +L S N
Sbjct: 455 TNILAGSASRRGS---YANP------------SVNALTESARRLSLVDFTPSVGSANSRS 499
Query: 679 RNQNQNQNQHNRNNRDGPS-QKTNQQQNQI--------------TKEMTVPNELIGAVIG 723
N + + ++ PS Q + Q I T+ +++P++++G +IG
Sbjct: 500 TNGSSAASSGATSSVVAPSVQSQSSQATAIPPSNAPPGSGQPLRTQSISIPSDMVGCIIG 559
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
+ GTKI EIR++SG+ I I+K +E + +R T+ GTP++ A YL+ +E
Sbjct: 560 RAGTKITEIRRLSGSKISIAKGPHDE--TGERMFTIVGTPESNEKALYLLYNQLE 612
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 172/348 (49%), Gaps = 40/348 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V LRE++G K +S + ER+++V GS+ + +A++ I + +
Sbjct: 287 KDAGIIIGKAGKNVADLREQTGVKAGVSKVVAGVHERVLSVTGSVQGVAKAYTTILQQLV 346
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ +I RL++ + G+IIG+ G +IK I+++SGA + DMLP
Sbjct: 347 TSSPSSTTAPANPSNHTII--RLLISHNLMGTIIGRNGLKIKNIQDSSGARMVAQKDMLP 404
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGMQ 180
STER V ++G P+A+ +AI +I +++ +G T+ Y+P AGGP I N
Sbjct: 405 QSTERIVEVQGSPEAIGKAIEEIGKCLLEDWERGLGTVLYQP---GAGGPDAITNILAGS 461
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
S G+ NP S + +L S N N +
Sbjct: 462 ASRRGS---YANP------------SVNALTESARRLSLVDFTPSVGSANSRSTNGSSAA 506
Query: 241 NQHNRNNRDGPS-QKTNQQQNQI--------------TKEMTVPNELIGAVIGKGGTKIF 285
+ ++ PS Q + Q I T+ +++P++++G +IG+ GTKI
Sbjct: 507 SSGATSSVVAPSVQSQSSQATAIPPSNAPPGSGQPLRTQSISIPSDMVGCIIGRAGTKIT 566
Query: 286 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
EIR++SG+ I I+K +E + +R T+ GTP++ A YL+ +E
Sbjct: 567 EIRRLSGSKISIAKGPHDE--TGERMFTIVGTPESNEKALYLLYNQLE 612
>gi|426201505|gb|EKV51428.1| hypothetical protein AGABI2DRAFT_182391 [Agaricus bisporus var.
bisporus H97]
Length = 340
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 172/343 (50%), Gaps = 55/343 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V LRE++G K +S ER++TV GS+D++ +A++
Sbjct: 27 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSGSVDAVAKAYT 86
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + + + + + +RL++ + G+IIG+ G +IK I++ SGA +
Sbjct: 87 LIITQL--VTASPASPVVSSPSTIHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMV 144
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLI 618
+ +MLP STER V ++G P+A+ +A+ +I +++ +G T+ + PG +
Sbjct: 145 ASKEMLPQSTERIVEVQGAPEAIGRAVEEIGKCLLEDWERGLGTVLFH--------PGTV 196
Query: 619 GNQFG---MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
++ G Q S +P G A N G + A AS
Sbjct: 197 DDRSGGNRRQGSYSASPQYGAQRRA---------NGDGN---------VRARASPPASPT 238
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
H P + N +N +++P++++G +IG+ GTKI EIR++
Sbjct: 239 HSPISSQPPANLRTQN-------------------ISIPSDMVGCIIGRSGTKITEIRRL 279
Query: 736 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
SG+ I I+K+ +E + +R T+ GTP+A A +L+ +E
Sbjct: 280 SGSKISIAKAPHDE--TGERMFTIVGTPEANEKALFLLYNQLE 320
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 168/336 (50%), Gaps = 55/336 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V LRE++G K +S ER++TV GS+D++ +A++LI +
Sbjct: 34 KDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSGSVDAVAKAYTLIITQL- 92
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ + + + +RL++ + G+IIG+ G +IK I++ SGA + + +MLP
Sbjct: 93 -VTASPASPVVSSPSTIHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMVASKEMLP 151
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFG-- 178
STER V ++G P+A+ +A+ +I +++ +G T+ + PG + ++ G
Sbjct: 152 QSTERIVEVQGAPEAIGRAVEEIGKCLLEDWERGLGTVLFH--------PGTVDDRSGGN 203
Query: 179 -MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
Q S +P G A N G + A AS H P +
Sbjct: 204 RRQGSYSASPQYGAQRRA---------NGDGN---------VRARASPPASPTHSPISSQ 245
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
N +N +++P++++G +IG+ GTKI EIR++SG+ I I
Sbjct: 246 PPANLRTQN-------------------ISIPSDMVGCIIGRSGTKITEIRRLSGSKISI 286
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+K+ +E + +R T+ GTP+A A +L+ +E
Sbjct: 287 AKAPHDE--TGERMFTIVGTPEANEKALFLLYNQLE 320
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 105/260 (40%), Gaps = 70/260 (26%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ + + L+G +IG+ G KI I+ SGA R+ S E S +R + + G P+AI A
Sbjct: 113 RLLISHNLMGTIIGRNGLKIKAIQDNSGA--RMVASKEMLPQSTERIVEVQGAPEAIGRA 170
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
VE + G+ ++D+ L +L
Sbjct: 171 -------VEEI---------GKCLLEDWERG------------------------LGTVL 190
Query: 385 TKPGALNALT-------SLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNY------- 430
PG ++ + S SA S G G GN P P +
Sbjct: 191 FHPGTVDDRSGGNRRQGSYSA----SPQYGAQRRANGDGNVRARASPPASPTHSPISSQP 246
Query: 431 -ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVT 486
AN++T + + VG IIG+SG + ++R SGSKI I+ + T ER+ T
Sbjct: 247 PANLRTQNIS------IPSDMVGCIIGRSGTKITEIRRLSGSKISIAKAPHDETGERMFT 300
Query: 487 VIGSMDSLFRAFSLITKNIE 506
++G+ ++ +A L+ +E
Sbjct: 301 IVGTPEANEKALFLLYNQLE 320
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR +V G IIGK G + +RE +G V S ++P ER + + G DAV +
Sbjct: 25 LTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGV-SKVIPGVHERVLTVSGSVDAVAK 83
Query: 140 AIYQICLIMVDSPPKGATI 158
A I +V + P +
Sbjct: 84 AYTLIITQLVTASPASPVV 102
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR +V G IIGK G + +RE +G V S ++P ER + + G DAV +
Sbjct: 25 LTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGV-SKVIPGVHERVLTVSGSVDAVAK 83
Query: 585 AIYQICLIMVDSPPKGATI 603
A I +V + P +
Sbjct: 84 AYTLIITQLVTASPASPVV 102
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 171/344 (49%), Gaps = 50/344 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + RA++
Sbjct: 45 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARAYA 104
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
L+ K + E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 105 LVAKGLLEGAPQMG--MGGVVSNNGTHPV---RLLISHNQMGTIIGRSGLKIKHIQDASG 159
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGG 614
+ +MLP STER V ++G P+ + +A+++I ++D +G TI Y P + + G
Sbjct: 160 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVG 219
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
+ G S GN A + + GG G
Sbjct: 220 TAPVNQNVGNGYSSRPYNRTGNG--ADFS------DQSGGYG------------------ 253
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
R N + +NR P + ++ Q T+ +++P +++G +IG+ G+KI EIR+
Sbjct: 254 ----RRSNPDT-----SNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRAGSKITEIRR 303
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
SGA I I+K+ +D+ +R T+ G+ A A YL+ ++E
Sbjct: 304 SSGARISIAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLE 345
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 167/337 (49%), Gaps = 50/337 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + RA++L+ K +
Sbjct: 52 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARAYALVAKGLL 111
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 112 EGAPQMG--MGGVVSNNGTHPV---RLLISHNQMGTIIGRSGLKIKHIQDASGVRMVAQK 166
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQ 176
+MLP STER V ++G P+ + +A+++I ++D +G TI Y P + + G +
Sbjct: 167 EMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVGTAPVNQN 226
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
G S GN A + + GG G R
Sbjct: 227 VGNGYSSRPYNRTGNG--ADFS------DQSGGYG----------------------RRS 256
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + +NR P + ++ Q T+ +++P +++G +IG+ G+KI EIR+ SGA I
Sbjct: 257 NPDT-----SNRGYPLVTEDGEEIQ-TQNISIPADMVGCIIGRAGSKITEIRRSSGARIS 310
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I+K+ +D+ +R T+ G+ A A YL+ ++E
Sbjct: 311 IAKAP--HDDTGERMFTIMGSAQANEKALYLLYENLE 345
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 44/242 (18%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G +IG+ G KI I+ SG +R+ E S +R + + GTP+ I A + I
Sbjct: 140 MGTIIGRSGLKIKHIQDASG--VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEI---- 193
Query: 333 ELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNA 392
G+ +DD+ G NP A A + G +
Sbjct: 194 ------------GKCLIDDWQRGT---------GTILYNPAVRASVGTAPVNQNVGNGYS 232
Query: 393 LTSLSALGGLSDLLGGGSSGGGSGNSGGFGGV--PQGPN--YANIQTTGVQRRMRHI-MQ 447
+ G +D S SGG+G P N Y + G + + ++I +
Sbjct: 233 SRPYNRTGNGADF---------SDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIP 283
Query: 448 GKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKN 504
VG IIG++G + ++R SG++I I+ + T ER+ T++GS + +A L+ +N
Sbjct: 284 ADMVGCIIGRAGSKITEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYEN 343
Query: 505 IE 506
+E
Sbjct: 344 LE 345
>gi|19075184|ref|NP_587684.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|74626925|sp|O74919.1|RNC1_SCHPO RecName: Full=RNA-binding protein rnc1; AltName: Full=RNA-binding
protein that suppresses calcineurin deletion 1
gi|3702642|emb|CAA21234.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces pombe]
Length = 398
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 171/356 (48%), Gaps = 57/356 (16%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVT 486
YA Q T +R ++ +E G IIGK+G+ V +LR + K ++ + + +R++T
Sbjct: 88 TYATQQLT-----LRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLT 142
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLI-QLRLIVPASQCGSIIGKGGS 545
+ G ++++ RA+ I I+ F KN G ++ +LRL++ S GSIIG+ G
Sbjct: 143 ISGPLENVVRAYRFI---IDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGL 199
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ + + DMLP STER V I G D + AI++I ++D +GA T+
Sbjct: 200 RIKLIQDKCSCRMIASKDMLPQSTERTVEIHGTVDNLHAAIWEIGKCLIDDWERGAGTVF 259
Query: 605 YRPLPQ-NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
Y P+ + P L Q S AP SG + +
Sbjct: 260 YNPVSRLTQPLPSLASTASPQQVSPPAAP---------------STTSGEAIPENFVSYG 304
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 723
++Q MP QQ ++T+ +++P +++G +IG
Sbjct: 305 AQVFPATQ-----MP----------------------FLQQPKVTQNISIPADMVGCIIG 337
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVEL 779
+GG+KI EIR+ SG+ I I+K E +++ +R T+TGT + A +L+ +E+
Sbjct: 338 RGGSKISEIRRTSGSKISIAK--EPHDETGERMFTITGTHEENEKALFLLYQQLEM 391
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 164/339 (48%), Gaps = 52/339 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITK 58
+ +E G IIGK+G+ V +LR + K ++ + + +R++T+ G ++++ RA+ I
Sbjct: 100 LSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISGPLENVVRAYRFI-- 157
Query: 59 NIEEFHKNQNKHLGGNGESQLI-QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
I+ F KN G ++ +LRL++ S GSIIG+ G +IK I++ + +
Sbjct: 158 -IDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIASK 216
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQ-NAGGPGLIGN 175
DMLP STER V I G D + AI++I ++D +GA T+ Y P+ + P L
Sbjct: 217 DMLPQSTERTVEIHGTVDNLHAAIWEIGKCLIDDWERGAGTVFYNPVSRLTQPLPSLAST 276
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
Q S AP SG + + ++Q MP
Sbjct: 277 ASPQQVSPPAAP---------------STTSGEAIPENFVSYGAQVFPATQ-----MP-- 314
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
QQ ++T+ +++P +++G +IG+GG+KI EIR+ SG+ I
Sbjct: 315 --------------------FLQQPKVTQNISIPADMVGCIIGRGGSKISEIRRTSGSKI 354
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVEL 334
I+K E +++ +R T+TGT + A +L+ +E+
Sbjct: 355 SIAK--EPHDETGERMFTITGTHEENEKALFLLYQQLEM 391
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 51/279 (18%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR-KISGAMIRISKSSE 302
N N DG N + + + + L+G++IG+ G +I I+ K S MI S +
Sbjct: 164 NSTNPDGTPSDANTPRKL---RLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMI---ASKD 217
Query: 303 EEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSA 362
S +RT+ + GT D + A + I G+ +DD+
Sbjct: 218 MLPQSTERTVEIHGTVDNLHAAIWEI----------------GKCLIDDWERG------- 254
Query: 363 PLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGS--GNSGG 420
AG NP++ LT+P L +L S ++ +S ++ G + N
Sbjct: 255 --AGTVFYNPVSR--------LTQP--LPSLASTASPQQVSPPAAPSTTSGEAIPENFVS 302
Query: 421 FGG-VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--- 476
+G V +Q V + + + VG IIG+ G + ++R SGSKI I+
Sbjct: 303 YGAQVFPATQMPFLQQPKVTQNIS--IPADMVGCIIGRGGSKISEIRRTSGSKISIAKEP 360
Query: 477 DSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKH 515
T ER+ T+ G+ + +A L+ + + E K++ H
Sbjct: 361 HDETGERMFTITGTHEENEKALFLLYQQL-EMEKDRRSH 398
>gi|242021848|ref|XP_002431355.1| heterogeneous nuclear ribonucleoprotein, putative [Pediculus
humanus corporis]
gi|212516623|gb|EEB18617.1| heterogeneous nuclear ribonucleoprotein, putative [Pediculus
humanus corporis]
Length = 126
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 92/139 (66%), Gaps = 21/139 (15%)
Query: 192 NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP 251
NPLAGLAALGL + GG LN AALAALA SQL+TN+ RNQ N Q
Sbjct: 8 NPLAGLAALGLPALNTTNTGG-LNPAALAALAGSQLRTNNPSRNQQGNSQQ--------- 57
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
T EMTVPNELIG +IGKGGTKI EIR++SGAMIRIS S E E + DRT
Sbjct: 58 -----------THEMTVPNELIGCIIGKGGTKIAEIRQLSGAMIRISNSEEREGGNTDRT 106
Query: 312 ITMTGTPDAIALAQYLINM 330
IT+ G P+A+ALAQYLINM
Sbjct: 107 ITIAGNPEAVALAQYLINM 125
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 92/139 (66%), Gaps = 21/139 (15%)
Query: 637 NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP 696
NPLAGLAALGL + GG LN AALAALA SQL+TN+ RNQ N Q
Sbjct: 8 NPLAGLAALGLPALNTTNTGG-LNPAALAALAGSQLRTNNPSRNQQGNSQQ--------- 57
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
T EMTVPNELIG +IGKGGTKI EIR++SGAMIRIS S E E + DRT
Sbjct: 58 -----------THEMTVPNELIGCIIGKGGTKIAEIRQLSGAMIRISNSEEREGGNTDRT 106
Query: 757 ITMTGTPDAIALAQYLINM 775
IT+ G P+A+ALAQYLINM
Sbjct: 107 ITIAGNPEAVALAQYLINM 125
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 84 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAI 141
+ VP G IIGKGG++I IR+ SGA + +++ + +T+R + I G P+AV A
Sbjct: 61 MTVPNELIGCIIGKGGTKIAEIRQLSGAMIRISNSEEREGGNTDRTITIAGNPEAVALAQ 120
Query: 142 YQI 144
Y I
Sbjct: 121 YLI 123
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 529 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAI 586
+ VP G IIGKGG++I IR+ SGA + +++ + +T+R + I G P+AV A
Sbjct: 61 MTVPNELIGCIIGKGGTKIAEIRQLSGAMIRISNSEEREGGNTDRTITIAGNPEAVALAQ 120
Query: 587 YQI 589
Y I
Sbjct: 121 YLI 123
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 113/185 (61%), Gaps = 10/185 (5%)
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSM 491
+T Q MR ++ + IIGKSG+ + ++R++S +++ IS+ PERI+TV G +
Sbjct: 541 ETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPL 600
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
D++ +AF LI + I ++ L S+ + +R IVP S+ GS+IGK GS+IK I+
Sbjct: 601 DAVSKAFGLIVRRI----NDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQ 656
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQ 610
E SGA + MLP STER ++I GV DAV A+Y + I+++ P + A +PYRP
Sbjct: 657 EASGARLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGSILLEHPDRNANNLPYRP--- 713
Query: 611 NAGGP 615
AGGP
Sbjct: 714 TAGGP 718
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 105/165 (63%), Gaps = 10/165 (6%)
Query: 9 IIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGKSG+ + ++R++S +++ IS+ PERI+TV G +D++ +AF LI + I +
Sbjct: 561 IIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPLDAVSKAFGLIVRRI----ND 616
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
+ L S+ + +R IVP S+ GS+IGK GS+IK I+E SGA + MLP STER
Sbjct: 617 EPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPGSTER 676
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGP 170
++I GV DAV A+Y + I+++ P + A +PYRP AGGP
Sbjct: 677 VLSISGVADAVHIAVYYVGSILLEHPDRNANNLPYRP---TAGGP 718
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 137/321 (42%), Gaps = 53/321 (16%)
Query: 71 LGGNGESQLIQ--LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 128
+G + E+Q Q +R ++ S IIGK G I IR+ S A + + S+++P + ER +
Sbjct: 536 VGDSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNI-SEIIPGNPERIL 594
Query: 129 NIKGVPDAVTQAIYQICLIMVDSPPKGATIP------YRPLPQNAGGPGLIGNQFGMQNS 182
+ G DAV++A I + D P A++P R + N+ +IG Q
Sbjct: 595 TVSGPLDAVSKAFGLIVRRINDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKE 654
Query: 183 LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQ 242
+ A G AG A L + G +A +A + H RN N N
Sbjct: 655 IQEAS--GARLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGSILLEHPDRNAN---NL 709
Query: 243 HNRNNRDGPSQKTN----------QQ--------------------QNQI-----TKEMT 267
R GPS + QQ Q+ T+++
Sbjct: 710 PYRPTAGGPSTRAGAAGANPYAAPQQPFGYGAPAAGFGGAPAGAGGAPQLPPGSQTQQIF 769
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISK---SSEEEEDSNDRTITMTGTPDAIALA 324
+PN+L+G +IGKGG+KI EIR +S + I+I + N+R +T+TG P I +A
Sbjct: 770 IPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMA 829
Query: 325 QYLINMSVELLRANLNGEGGG 345
L+ +E + L +GG
Sbjct: 830 VSLLYQRLEQEKMRL-AQGGA 849
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 137/321 (42%), Gaps = 53/321 (16%)
Query: 516 LGGNGESQLIQ--LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 573
+G + E+Q Q +R ++ S IIGK G I IR+ S A + + S+++P + ER +
Sbjct: 536 VGDSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNI-SEIIPGNPERIL 594
Query: 574 NIKGVPDAVTQAIYQICLIMVDSPPKGATIP------YRPLPQNAGGPGLIGNQFGMQNS 627
+ G DAV++A I + D P A++P R + N+ +IG Q
Sbjct: 595 TVSGPLDAVSKAFGLIVRRINDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKE 654
Query: 628 LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQ 687
+ A G AG A L + G +A +A + H RN N N
Sbjct: 655 IQEAS--GARLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGSILLEHPDRNAN---NL 709
Query: 688 HNRNNRDGPSQKTN----------QQ--------------------QNQI-----TKEMT 712
R GPS + QQ Q+ T+++
Sbjct: 710 PYRPTAGGPSTRAGAAGANPYAAPQQPFGYGAPAAGFGGAPAGAGGAPQLPPGSQTQQIF 769
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISK---SSEEEEDSNDRTITMTGTPDAIALA 769
+PN+L+G +IGKGG+KI EIR +S + I+I + N+R +T+TG P I +A
Sbjct: 770 IPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMA 829
Query: 770 QYLINMSVELLRANLNGEGGG 790
L+ +E + L +GG
Sbjct: 830 VSLLYQRLEQEKMRL-AQGGA 849
>gi|321257616|ref|XP_003193652.1| cytoplasm protein [Cryptococcus gattii WM276]
gi|317460122|gb|ADV21865.1| Cytoplasm protein, putative [Cryptococcus gattii WM276]
Length = 367
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 181/369 (49%), Gaps = 40/369 (10%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFR 496
Q +R ++ KE G IIGKSG T+ +R+ +G K +S +R+++V G ++ +
Sbjct: 30 QLSLRSLVSTKEAGIIIGKSGATIAAIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEGVAS 89
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
A++ + + + E + + L +RL++ + G++IG+ G +IK I++ SGA
Sbjct: 90 AYAEVARLLLETPLS-DSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQDMSGA 148
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGP 615
+ + +MLP STER V ++G DA+ A+ +I +++ +GA T+ Y P
Sbjct: 149 RMVASKEMLPQSTERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAGTVLYH--------P 200
Query: 616 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
G G+ AG+ A GLG + G GG+ ++AA
Sbjct: 201 GAAGD-------------------AGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDR 241
Query: 676 HMPRN---QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI--GKGGTKIF 730
R + R +GP N N T+ +++P++++G +I G+GG+KI
Sbjct: 242 RPSRGGSISGPSGVSGERKPSEGPQVNLN-DPNLRTQNISIPSDMVGCIIISGRGGSKIT 300
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRA-NLNGEGG 789
EIR++SG+ I I+K +E + +R T+ GTP+A A L+ +E + +NG G
Sbjct: 301 EIRRLSGSRISIAKVPHDE--TGERMFTIQGTPEATERALMLLYSQLESEKERRVNGSGS 358
Query: 790 GESNMDDFS 798
DF+
Sbjct: 359 EAPASADFA 367
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 176/359 (49%), Gaps = 40/359 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGKSG T+ +R+ +G K +S +R+++V G ++ + A++ + + +
Sbjct: 40 KEAGIIIGKSGATIAAIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEGVASAYAEVARLLL 99
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E + + L +RL++ + G++IG+ G +IK I++ SGA + + +MLP
Sbjct: 100 ETPLS-DSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLKIKQIQDMSGARMVASKEMLP 158
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGMQ 180
STER V ++G DA+ A+ +I +++ +GA T+ Y PG G+
Sbjct: 159 QSTERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAGTVLYH--------PGAAGD----- 205
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN---QN 237
AG+ A GLG + G GG+ ++AA R
Sbjct: 206 --------------AGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDRRPSRGGSISG 251
Query: 238 QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI--GKGGTKIFEIRKISGAMI 295
+ R +GP N N T+ +++P++++G +I G+GG+KI EIR++SG+ I
Sbjct: 252 PSGVSGERKPSEGPQVNLN-DPNLRTQNISIPSDMVGCIIISGRGGSKITEIRRLSGSRI 310
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRA-NLNGEGGGESNMDDFS 353
I+K +E + +R T+ GTP+A A L+ +E + +NG G DF+
Sbjct: 311 SIAKVPHDE--TGERMFTIQGTPEATERALMLLYSQLESEKERRVNGSGSEAPASADFA 367
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
G + LR +V + G IIGK G+ I IR+++G V S ++ +R +++ G
Sbjct: 25 QGAEHQLSLRSLVSTKEAGIIIGKSGATIAAIRDSTGVKAGV-SKVVQGVQDRVLSVTGD 83
Query: 134 PDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
+ V A ++ +++++P +++P P+
Sbjct: 84 LEGVASAYAEVARLLLETPLSDSSLPPPPV 113
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
G + LR +V + G IIGK G+ I IR+++G V S ++ +R +++ G
Sbjct: 25 QGAEHQLSLRSLVSTKEAGIIIGKSGATIAAIRDSTGVKAGV-SKVVQGVQDRVLSVTGD 83
Query: 579 PDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
+ V A ++ +++++P +++P P+
Sbjct: 84 LEGVASAYAEVARLLLETPLSDSSLPPPPV 113
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 175/376 (46%), Gaps = 53/376 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L+ E+G+ I +S S T ER+ V GS +SL
Sbjct: 36 LKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAESLLS 95
Query: 497 AFSLITKNIEEFHKNQNKHLGG---------NGESQLIQLRLIVPASQCGSIIGKGGSQI 547
+ I + + E + K+ G N E + Q +LIVP + G IIGKGG+ +
Sbjct: 96 VHNFIAEKVREVPQGGTKNDLGVLLPPQTTINAE-RAKQAKLIVPNTTAGLIIGKGGATV 154
Query: 548 KTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT---I 603
++I E SGA V ++ PN ER V + G P V +AI I + PP+G T I
Sbjct: 155 RSIMEESGAWVQLSQKPAGPNLHERVVTVSGEPSQVQKAIRSIIHKSREDPPQGTTHLNI 214
Query: 604 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDM---------------GNNPLAGLAALGLG 648
Y N+ GP N G + A + G + LA AAL
Sbjct: 215 SY----TNSQGPVANSNPTGSPYAGGSAEQVLTPFQPAPPAPPAITGGDLLAISAALNTL 270
Query: 649 GNSG--GGMG-----GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTN 701
+ G GMG GG++ AA+ LAS + + G T
Sbjct: 271 ASYGYSTGMGFNPLVGGVHPAAVNLLASYTGEAGPA----LGLGGGGILLEKMGAESVTG 326
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
++ T EM VP L+GA++GKGG + E ++++GA I+ISK E + R +T+TG
Sbjct: 327 KE----TLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITG 382
Query: 762 TPDAIALAQYLINMSV 777
P A AQYLI V
Sbjct: 383 PPGATQAAQYLIGQRV 398
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 171/366 (46%), Gaps = 53/366 (14%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L+ E+G+ I +S S T ER+ V GS +SL + I + +
Sbjct: 46 GSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAESLLSVHNFIAEKVR 105
Query: 62 EFHKNQNKHLGG---------NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
E + K+ G N E + Q +LIVP + G IIGKGG+ +++I E SGA
Sbjct: 106 EVPQGGTKNDLGVLLPPQTTINAE-RAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAW 164
Query: 113 VYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT---IPYRPLPQNAG 168
V ++ PN ER V + G P V +AI I + PP+G T I Y N+
Sbjct: 165 VQLSQKPAGPNLHERVVTVSGEPSQVQKAIRSIIHKSREDPPQGTTHLNISY----TNSQ 220
Query: 169 GPGLIGNQFGMQNSLMGAPDM---------------GNNPLAGLAALGLGGNSG--GGMG 211
GP N G + A + G + LA AAL + G GMG
Sbjct: 221 GPVANSNPTGSPYAGGSAEQVLTPFQPAPPAPPAITGGDLLAISAALNTLASYGYSTGMG 280
Query: 212 -----GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEM 266
GG++ AA+ LAS + + G T ++ T EM
Sbjct: 281 FNPLVGGVHPAAVNLLASYTGEAGPA----LGLGGGGILLEKMGAESVTGKE----TLEM 332
Query: 267 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 326
VP L+GA++GKGG + E ++++GA I+ISK E + R +T+TG P A AQY
Sbjct: 333 AVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGATQAAQY 392
Query: 327 LINMSV 332
LI V
Sbjct: 393 LIGQRV 398
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 75 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKG 132
GE + L++++P+ GSIIGKGG I ++ +GA++ + + D P +TER ++G
Sbjct: 29 GEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQG 88
Query: 133 VPDAVTQAIYQICLIMVDSPPKGAT 157
+++ +++ V P+G T
Sbjct: 89 SAESLL-SVHNFIAEKVREVPQGGT 112
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 520 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKG 577
GE + L++++P+ GSIIGKGG I ++ +GA++ + + D P +TER ++G
Sbjct: 29 GEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQG 88
Query: 578 VPDAVTQAIYQICLIMVDSPPKGAT 602
+++ +++ V P+G T
Sbjct: 89 SAESLL-SVHNFIAEKVREVPQGGT 112
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 113/268 (42%), Gaps = 35/268 (13%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
P Q T + ++ VPN G +IGKGG + I + SGA +++S+ + ++R
Sbjct: 121 PPQTTINAERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQKP-AGPNLHER 179
Query: 311 TITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD----NNLPSSAPLAG 366
+T++G P + Q I + R + +G N+ +S N+ P+ +P AG
Sbjct: 180 VVTVSGEPSQV---QKAIRSIIHKSRED-PPQGTTHLNISYTNSQGPVANSNPTGSPYAG 235
Query: 367 LNAS---NPLAAALPQLAQI-----LTKPGALNALTSLSALGGLS-DLLGGGSSGGGSGN 417
+A P A P I L ALN L S G+ + L GG
Sbjct: 236 GSAEQVLTPFQPAPPAPPAITGGDLLAISAALNTLASYGYSTGMGFNPLVGGVHPAAVNL 295
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRM-RHIMQGKE----------VGSIIGKSGETVKKLR 466
+ G GP + +M + GKE VG+I+GK G+T+ + +
Sbjct: 296 LASYTG-EAGPALGLGGGGILLEKMGAESVTGKETLEMAVPETLVGAILGKGGKTLVEYQ 354
Query: 467 EESGSKIYISDS-----STPERIVTVIG 489
E +G++I IS T R VT+ G
Sbjct: 355 ELTGARIQISKKGEFVPGTRSRKVTITG 382
>gi|443924046|gb|ELU43123.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 386
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 174/373 (46%), Gaps = 80/373 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMD------- 492
+R ++ KE G IIGK G+ V LRE++G K +S ER+++V G+++
Sbjct: 44 LRALVTTKEAGVIIGKGGKNVADLREQTGVKAGVSKVVQGVNERVLSVSGTVEDVAKARY 103
Query: 493 SLFR------AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
SL R A++LI + + + S LRL++ + G+IIG+GG +
Sbjct: 104 SLHRPAILHFAYTLIITQLLQSAPSSPGAPPPPPSSTHTSLRLLISHNLMGTIIGRGGLK 163
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPY 605
IK I++ SGA + + +MLP STER V ++G +++ +AI +I +++ +G T+ Y
Sbjct: 164 IKAIQDNSGARMVASKEMLPQSTERVVEVQGSSESIGRAIAEIGRCLLEDWERGLGTVLY 223
Query: 606 RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALA 665
P GPG G +PL GG G N+ A A
Sbjct: 224 HP------GPG-----------------TGADPL-------------GGTGARRNSGAFA 247
Query: 666 ALASSQLKTNHMPRN-----QNQNQNQHNRNNRDGPSQKTNQQQNQI------------- 707
T+ PR N NR + G SQ
Sbjct: 248 P------STSTTPRRISSAADNVYSGASNRRSVSGISQVVGNNSPPSRSPPPSQTPPAAA 301
Query: 708 --TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
T+ +++P++++G +IG+ G+KI EIR++SG+ I I+K+ +E + +R T+ GTPDA
Sbjct: 302 LRTQNISIPSDMVGCIIGRAGSKITEIRRLSGSKISIAKTPHDE--TGERMFTIVGTPDA 359
Query: 766 IALAQYLINMSVE 778
A +L+ +E
Sbjct: 360 NEKALFLLYNQLE 372
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 170/366 (46%), Gaps = 80/366 (21%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMD-------SLFR--- 51
KE G IIGK G+ V LRE++G K +S ER+++V G+++ SL R
Sbjct: 51 KEAGVIIGKGGKNVADLREQTGVKAGVSKVVQGVNERVLSVSGTVEDVAKARYSLHRPAI 110
Query: 52 ---AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 108
A++LI + + + S LRL++ + G+IIG+GG +IK I++
Sbjct: 111 LHFAYTLIITQLLQSAPSSPGAPPPPPSSTHTSLRLLISHNLMGTIIGRGGLKIKAIQDN 170
Query: 109 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNA 167
SGA + + +MLP STER V ++G +++ +AI +I +++ +G T+ Y P
Sbjct: 171 SGARMVASKEMLPQSTERVVEVQGSSESIGRAIAEIGRCLLEDWERGLGTVLYHP----- 225
Query: 168 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
GPG G +PL GG G N+ A A
Sbjct: 226 -GPG-----------------TGADPL-------------GGTGARRNSGAFAP------ 248
Query: 228 KTNHMPRN-----QNQNQNQHNRNNRDGPSQKTNQQQNQI---------------TKEMT 267
T+ PR N NR + G SQ T+ ++
Sbjct: 249 STSTTPRRISSAADNVYSGASNRRSVSGISQVVGNNSPPSRSPPPSQTPPAAALRTQNIS 308
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
+P++++G +IG+ G+KI EIR++SG+ I I+K+ +E + +R T+ GTPDA A +L
Sbjct: 309 IPSDMVGCIIGRAGSKITEIRRLSGSKISIAKTPHDE--TGERMFTIVGTPDANEKALFL 366
Query: 328 INMSVE 333
+ +E
Sbjct: 367 LYNQLE 372
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 238 QNQNQHNR--NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
++QN H+R + DG +Q + +T V + G +IGKGG + ++R+ +G
Sbjct: 16 EDQNNHSRPGSPADGTAQNNGPDSDTLTLRALVTTKEAGVIIGKGGKNVADLREQTGVKA 75
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+SK + N+R ++++GT + +A A+Y ++
Sbjct: 76 GVSKVV---QGVNERVLSVSGTVEDVAKARYSLH 106
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 683 QNQNQHNR--NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
++QN H+R + DG +Q + +T V + G +IGKGG + ++R+ +G
Sbjct: 16 EDQNNHSRPGSPADGTAQNNGPDSDTLTLRALVTTKEAGVIIGKGGKNVADLREQTGVKA 75
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+SK + N+R ++++GT + +A A+Y ++
Sbjct: 76 GVSKVV---QGVNERVLSVSGTVEDVAKARYSLH 106
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
+S + LR +V + G IIGKGG + +RE +G V S ++ ER +++ G +
Sbjct: 38 DSDTLTLRALVTTKEAGVIIGKGGKNVADLREQTGVKAGV-SKVVQGVNERVLSVSGTVE 96
Query: 136 AVTQAIYQI 144
V +A Y +
Sbjct: 97 DVAKARYSL 105
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
+S + LR +V + G IIGKGG + +RE +G V S ++ ER +++ G +
Sbjct: 38 DSDTLTLRALVTTKEAGVIIGKGGKNVADLREQTGVKAGV-SKVVQGVNERVLSVSGTVE 96
Query: 581 AVTQAIYQI 589
V +A Y +
Sbjct: 97 DVAKARYSL 105
>gi|336376793|gb|EGO05128.1| hypothetical protein SERLA73DRAFT_174106 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389739|gb|EGO30882.1| hypothetical protein SERLADRAFT_455154 [Serpula lacrymans var.
lacrymans S7.9]
Length = 335
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 169/340 (49%), Gaps = 55/340 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ KE G IIGK+G+ V LRE++G K +S ER++ + GS++++ +A++
Sbjct: 32 LRALVSTKEAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLAISGSVEAVAKAYT 91
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+IT + + + +I RL++ + G+IIG+ G +IK I++ SGA +
Sbjct: 92 IITSQLVTSSSSLVSSPPPSLSHTVI--RLLISHNLMGTIIGRSGLKIKAIQDVSGARMV 149
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLI 618
+ DMLP STER V ++G P+A+ +AI +I +++ +G T+ + P
Sbjct: 150 ASKDMLPQSTERIVEVQGTPEAIGRAIEEIGRCLLEDWERGLGTVLFHP----------- 198
Query: 619 GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP 678
G+ + + + N L G+ G G
Sbjct: 199 ----GLGDDMSRSRKTANL---------LSGSGGSG------------------------ 221
Query: 679 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 738
R ++ N + P Q N T+ +++P++++G +IG+ G+KI EIR++SG+
Sbjct: 222 RTHEESTNNLASSPVSPPPASPVQPANLRTQNISIPSDMVGCIIGRSGSKITEIRRLSGS 281
Query: 739 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
I I+K+ +E + +R T+ GTP+A A +L+ +E
Sbjct: 282 KISIAKAPHDE--TGERMFTIVGTPEANEKALFLLYNQLE 319
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 165/333 (49%), Gaps = 55/333 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LRE++G K +S ER++ + GS++++ +A+++IT +
Sbjct: 39 KEAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLAISGSVEAVAKAYTIITSQLV 98
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ + +I RL++ + G+IIG+ G +IK I++ SGA + + DMLP
Sbjct: 99 TSSSSLVSSPPPSLSHTVI--RLLISHNLMGTIIGRSGLKIKAIQDVSGARMVASKDMLP 156
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGMQ 180
STER V ++G P+A+ +AI +I +++ +G T+ + P G+
Sbjct: 157 QSTERIVEVQGTPEAIGRAIEEIGRCLLEDWERGLGTVLFHP---------------GLG 201
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
+ + + N L G+ G G R ++
Sbjct: 202 DDMSRSRKTANL---------LSGSGGSG------------------------RTHEEST 228
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
N + P Q N T+ +++P++++G +IG+ G+KI EIR++SG+ I I+K+
Sbjct: 229 NNLASSPVSPPPASPVQPANLRTQNISIPSDMVGCIIGRSGSKITEIRRLSGSKISIAKA 288
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+E + +R T+ GTP+A A +L+ +E
Sbjct: 289 PHDE--TGERMFTIVGTPEANEKALFLLYNQLE 319
>gi|392597310|gb|EIW86632.1| cytoplasmic protein [Coniophora puteana RWD-64-598 SS2]
Length = 328
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 171/340 (50%), Gaps = 61/340 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ KE G IIGK+G+ V LR+++G K +S ER++TV GS++++ +A++
Sbjct: 28 LRALVSTKEAGVIIGKAGKNVADLRDQTGVKAGVSKVIPGVHERVLTVGGSVEAVAKAYT 87
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI I + ++ + + S +RL++ + G+IIG+ G +IK I++ +G +
Sbjct: 88 LI---IAQLVESNPTSVSMSSPSPHTSIRLLISHNLMGTIIGRNGLKIKAIQDVTGVRMV 144
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLI 618
A DMLP STER V ++G P+++ +AI +I +++ +G T+ Y PG +
Sbjct: 145 AAKDMLPQSTERIVEVQGAPESIGRAIEEIGKCLLEDWERGLGTVLYH--------PGTV 196
Query: 619 GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP 678
++ G + + G GG
Sbjct: 197 DDRSGSKRT-------------------------NGYAGG-------------------- 211
Query: 679 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 738
R N + + + S ++ Q N T+ +++P++++G +IG+ GTKI EIR++SG+
Sbjct: 212 RRSNGDTAREQLSPSSPQSPTSSPQTNLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGS 271
Query: 739 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
I I+K +E + +R T+ GTP+A A +L+ +E
Sbjct: 272 KISIAKVPHDE--TGERMFTIIGTPEANEKALFLLYNQLE 309
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 167/333 (50%), Gaps = 61/333 (18%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+++G K +S ER++TV GS++++ +A++LI I
Sbjct: 35 KEAGVIIGKAGKNVADLRDQTGVKAGVSKVIPGVHERVLTVGGSVEAVAKAYTLI---IA 91
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ ++ + + S +RL++ + G+IIG+ G +IK I++ +G + A DMLP
Sbjct: 92 QLVESNPTSVSMSSPSPHTSIRLLISHNLMGTIIGRNGLKIKAIQDVTGVRMVAAKDMLP 151
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGMQ 180
STER V ++G P+++ +AI +I +++ +G T+ Y PG + ++ G +
Sbjct: 152 QSTERIVEVQGAPESIGRAIEEIGKCLLEDWERGLGTVLYH--------PGTVDDRSGSK 203
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
+ G GG R N +
Sbjct: 204 RT-------------------------NGYAGG--------------------RRSNGDT 218
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ + S ++ Q N T+ +++P++++G +IG+ GTKI EIR++SG+ I I+K
Sbjct: 219 AREQLSPSSPQSPTSSPQTNLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGSKISIAKV 278
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+E + +R T+ GTP+A A +L+ +E
Sbjct: 279 PHDE--TGERMFTIIGTPEANEKALFLLYNQLE 309
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 45/209 (21%)
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP-- 481
V P ++ + +R ++ +G+IIG++G +K +++ +G ++ + P
Sbjct: 94 VESNPTSVSMSSPSPHTSIRLLISHNLMGTIIGRNGLKIKAIQDVTGVRMVAAKDMLPQS 153
Query: 482 -ERIVTVIGSMDSLFRAFSLITKNIEE----------FH----------KNQNKHLGG-- 518
ERIV V G+ +S+ RA I K + E +H K N + GG
Sbjct: 154 TERIVEVQGAPESIGRAIEEIGKCLLEDWERGLGTVLYHPGTVDDRSGSKRTNGYAGGRR 213
Query: 519 -NGESQLIQLR-------------------LIVPASQCGSIIGKGGSQIKTIRETSGASV 558
NG++ QL + +P+ G IIG+ G++I IR SG+ +
Sbjct: 214 SNGDTAREQLSPSSPQSPTSSPQTNLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGSKI 273
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+A + ER I G P+A +A++
Sbjct: 274 SIAKVPHDETGERMFTIIGTPEANEKALF 302
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR +V + G IIGK G + +R+ +G V S ++P ER + + G +AV +
Sbjct: 26 LTLRALVSTKEAGVIIGKAGKNVADLRDQTGVKAGV-SKVIPGVHERVLTVGGSVEAVAK 84
Query: 140 AIYQICLIMVDSPPKGATI 158
A I +V+S P ++
Sbjct: 85 AYTLIIAQLVESNPTSVSM 103
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LR +V + G IIGK G + +R+ +G V S ++P ER + + G +AV +
Sbjct: 26 LTLRALVSTKEAGVIIGKAGKNVADLRDQTGVKAGV-SKVIPGVHERVLTVGGSVEAVAK 84
Query: 585 AIYQICLIMVDSPPKGATI 603
A I +V+S P ++
Sbjct: 85 AYTLIIAQLVESNPTSVSM 103
>gi|325087770|gb|EGC41080.1| KH domain RNA-binding protein [Ajellomyces capsulatus H88]
Length = 321
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 167/332 (50%), Gaps = 46/332 (13%)
Query: 423 GVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SST 480
G P+GP + + +R I+ KE G IIGK+G+ V LR+E+G K +S
Sbjct: 27 GEPEGPPKTDEEYAQSTLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGV 86
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSI 539
+R++TV G + +A++++ K + E +GG + +RL++ +Q G+I
Sbjct: 87 HDRVLTVTGPLQGTAKAYAIVAKGLLEGAPQLG--MGGVASNNGTHPVRLLISHNQMGTI 144
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
IG+ G +IK I++ SG + +MLP STER V ++G P+ + +A+++I ++D +
Sbjct: 145 IGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 204
Query: 600 GA-TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 658
G T+ Y P ++ S+ G P NN L G S GG GG
Sbjct: 205 GTGTVLYNP---------------AVRASVGGGPP--NNSLGS-------GASTGGYGG- 239
Query: 659 LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQ----KTNQQQNQITKEMTVP 714
S +T + +Q + R+N D S+ T + T+ +++P
Sbjct: 240 ----------RSYNRTGNGADFSDQTGGYNRRSNSDATSRGIPLVTEDGEEVQTQNISIP 289
Query: 715 NELIGAVIGKGGTKIFEIRKISGAMIRISKSS 746
++++G +IG+GG+KI EIR+ S A++ +S+ S
Sbjct: 290 SDMVGCIIGRGGSKISEIRR-SSALVFLSQGS 320
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 156/306 (50%), Gaps = 46/306 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A++++ K +
Sbjct: 53 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYAIVAKGLL 112
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG + +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 113 EGAPQLG--MGGVASNNGTHPVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFGM 179
P STER V ++G P+ + +A+++I ++D +G T+ Y P +
Sbjct: 171 PQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNP---------------AV 215
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ S+ G P NN L G S GG GG S +T + +Q
Sbjct: 216 RASVGGGPP--NNSLGS-------GASTGGYGG-----------RSYNRTGNGADFSDQT 255
Query: 240 QNQHNRNNRDGPSQ----KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+ R+N D S+ T + T+ +++P++++G +IG+GG+KI EIR+ S A++
Sbjct: 256 GGYNRRSNSDATSRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRR-SSALV 314
Query: 296 RISKSS 301
+S+ S
Sbjct: 315 FLSQGS 320
>gi|406608142|emb|CCH40576.1| Poly(rC)-binding protein 2 [Wickerhamomyces ciferrii]
Length = 457
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 169/374 (45%), Gaps = 63/374 (16%)
Query: 436 TGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDS 493
T V RM + Q KE ++GK GE + ++E SG++I +S++ ER++ V G ++
Sbjct: 85 TYVHFRM--LCQVKEAALVVGKGGEKISHIKEVSGTRINVSENIRGVTERVIHVRGPAEN 142
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
+ +AF L+T+ I + +N + +S L+L++P G +IGK G + K I E
Sbjct: 143 VAKAFGLMTRAILDEEEN----VPSTVDSHHFALQLLIPHQVIGYVIGKQGGKFKEIEEN 198
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP--KGATIPYRP---- 607
S A + +S +P ST+R + I GV D++ A Y + ++ P KG I Y P
Sbjct: 199 SAAKLNASSHSMPFSTDRCLTIAGVADSIHIATYYVAQTVLTHKPNFKGKVIFYDPGQQH 258
Query: 608 -LPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAA 666
Q L Q +Q+ G P NPL G +N L
Sbjct: 259 QHHQQQQQQHLNLPQHHLQHHQPGLPP---NPLL--------------FNGMMNFGQLPQ 301
Query: 667 LASSQ-LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQN-------------------- 705
Q L+ N+ R QHNRN+ Q+ N
Sbjct: 302 FDQRQLLQFNNFAR------PQHNRNHNGKFQQRPPFSMNVPINPLTLPLASSTGGVGGS 355
Query: 706 -QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
QIT+E+ +PNE +G VIGK G I I+ SG+ I+I+ + E S +R IT+ GT
Sbjct: 356 PQITQEIFIPNEYVGNVIGKSGKNIKLIKDTSGSKIQIADPNPE---SKERKITLVGTSA 412
Query: 765 AIALAQYLINMSVE 778
A +LIN +E
Sbjct: 413 GNQTAIFLINNRIE 426
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 164/363 (45%), Gaps = 61/363 (16%)
Query: 2 QGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKN 59
Q KE ++GK GE + ++E SG++I +S++ ER++ V G +++ +AF L+T+
Sbjct: 94 QVKEAALVVGKGGEKISHIKEVSGTRINVSENIRGVTERVIHVRGPAENVAKAFGLMTRA 153
Query: 60 IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
I + +N + +S L+L++P G +IGK G + K I E S A + +S
Sbjct: 154 ILDEEEN----VPSTVDSHHFALQLLIPHQVIGYVIGKQGGKFKEIEENSAAKLNASSHS 209
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP--KGATIPYRP-----LPQNAGGPGL 172
+P ST+R + I GV D++ A Y + ++ P KG I Y P Q L
Sbjct: 210 MPFSTDRCLTIAGVADSIHIATYYVAQTVLTHKPNFKGKVIFYDPGQQHQHHQQQQQQHL 269
Query: 173 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ-LKTNH 231
Q +Q+ G P NPL G +N L Q L+ N+
Sbjct: 270 NLPQHHLQHHQPGLPP---NPLL--------------FNGMMNFGQLPQFDQRQLLQFNN 312
Query: 232 MPRNQNQNQNQHNRNNRDGPSQKTNQQQN---------------------QITKEMTVPN 270
R QHNRN+ Q+ N QIT+E+ +PN
Sbjct: 313 FAR------PQHNRNHNGKFQQRPPFSMNVPINPLTLPLASSTGGVGGSPQITQEIFIPN 366
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
E +G VIGK G I I+ SG+ I+I+ + E S +R IT+ GT A +LIN
Sbjct: 367 EYVGNVIGKSGKNIKLIKDTSGSKIQIADPNPE---SKERKITLVGTSAGNQTAIFLINN 423
Query: 331 SVE 333
+E
Sbjct: 424 RIE 426
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+++IG VIGK G K EI + S A +++ SS S DR +T+ G D+I +A
Sbjct: 173 QLLIPHQVIGYVIGKQGGKFKEIEENSAA--KLNASSHSMPFSTDRCLTIAGVADSIHIA 230
Query: 325 QYLINMSVELLRANLNGE 342
Y + +V + N G+
Sbjct: 231 TYYVAQTVLTHKPNFKGK 248
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P+++IG VIGK G K EI + S A +++ SS S DR +T+ G D+I +A
Sbjct: 173 QLLIPHQVIGYVIGKQGGKFKEIEENSAA--KLNASSHSMPFSTDRCLTIAGVADSIHIA 230
Query: 770 QYLINMSVELLRANLNGE 787
Y + +V + N G+
Sbjct: 231 TYYVAQTVLTHKPNFKGK 248
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+G+ + R++ + ++GKGG +I I+E SG + V S+ + TER ++++G
Sbjct: 81 DGDPTYVHFRMLCQVKEAALVVGKGGEKISHIKEVSGTRINV-SENIRGVTERVIHVRGP 139
Query: 134 PDAVTQAI 141
+ V +A
Sbjct: 140 AENVAKAF 147
>gi|392573629|gb|EIW66768.1| hypothetical protein TREMEDRAFT_65168 [Tremella mesenterica DSM
1558]
Length = 350
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 168/344 (48%), Gaps = 38/344 (11%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFR 496
Q +R ++ KE G +IGK G+T+ +R ++ K +S +R+ +V G++D +
Sbjct: 24 QLSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVPGVQDRVFSVSGAVDHVAA 83
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF+ + + + E + + L +RL++ + G++IG+ G++IK I++ SGA
Sbjct: 84 AFAEVARLLLETPLS-DSSLPPPPVGAFTSVRLLISHNLMGTVIGRSGAKIKQIQDESGA 142
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLPQNAGG 614
+ + +MLP STER V I+G +A+ A+ +I CL M D T+ Y P AG
Sbjct: 143 RMVASKEMLPQSTERVVEIQGSVEAIKTAVLEIGKCL-MEDWERNTGTVLYHP--GAAGD 199
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G++ G Q G + + +A + G GG
Sbjct: 200 AGVLAGGLGAQTVTGGLGGIRRSSVA--PSFGFGGE------------------------ 233
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
M + + R D P + N T+ +++P++++G +IG+GGTKI EIR+
Sbjct: 234 RRMSGRPSISAPSETRRVSDAPPMVNDP--NLRTQNISIPSDMVGCIIGRGGTKITEIRR 291
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
+SG+ I I+K+ +E + +R T+ GT DA A L+ +E
Sbjct: 292 LSGSRISIAKAPHDE--TGERMFTIVGTADATERALMLLYSQLE 333
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 163/334 (48%), Gaps = 38/334 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G +IGK G+T+ +R ++ K +S +R+ +V G++D + AF+ + + +
Sbjct: 34 KEAGILIGKGGQTIADIRAKTNVKAGVSKVVPGVQDRVFSVSGAVDHVAAAFAEVARLLL 93
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E + + L +RL++ + G++IG+ G++IK I++ SGA + + +MLP
Sbjct: 94 ETPLS-DSSLPPPPVGAFTSVRLLISHNLMGTVIGRSGAKIKQIQDESGARMVASKEMLP 152
Query: 122 NSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
STER V I+G +A+ A+ +I CL M D T+ Y P AG G++ G
Sbjct: 153 QSTERVVEIQGSVEAIKTAVLEIGKCL-MEDWERNTGTVLYHP--GAAGDAGVLAGGLGA 209
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
Q G + + +A + G GG M + +
Sbjct: 210 QTVTGGLGGIRRSSVA--PSFGFGGE------------------------RRMSGRPSIS 243
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
R D P + N T+ +++P++++G +IG+GGTKI EIR++SG+ I I+K
Sbjct: 244 APSETRRVSDAPPMVNDP--NLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSRISIAK 301
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+ +E + +R T+ GT DA A L+ +E
Sbjct: 302 APHDE--TGERMFTIVGTADATERALMLLYSQLE 333
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
G + E QL LR +V + G +IGKGG I IR + V S ++P +R ++
Sbjct: 18 GHSDEPQL-SLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGV-SKVVPGVQDRVFSVS 75
Query: 132 GVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
G D V A ++ +++++P +++P P+
Sbjct: 76 GAVDHVAAAFAEVARLLLETPLSDSSLPPPPV 107
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
G + E QL LR +V + G +IGKGG I IR + V S ++P +R ++
Sbjct: 18 GHSDEPQL-SLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGV-SKVVPGVQDRVFSVS 75
Query: 577 GVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
G D V A ++ +++++P +++P P+
Sbjct: 76 GAVDHVAAAFAEVARLLLETPLSDSSLPPPPV 107
>gi|358342308|dbj|GAA49803.1| poly(rC)-binding protein 2/3/4 [Clonorchis sinensis]
Length = 528
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 142/311 (45%), Gaps = 57/311 (18%)
Query: 68 NKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
N H Q I LRL+VP CGS+IGKGG +IK +R+++GA++ VAS+ LPNS++
Sbjct: 26 NSHTVDKAAKQYPPITLRLLVPTIHCGSLIGKGGKRIKFLRQSTGAAIQVASESLPNSSD 85
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMG 185
R + I G AV ++ +CL + P+ P P + G I + S M
Sbjct: 86 RTITITGSARAVALCVHHVCLKTLRF--IYGYYPFSP-PSMSSAQGSILRTARIHESTMA 142
Query: 186 APDMGNNPLAGLAALGLGGNSGGGMGGGL------NAAALAALA-SSQLKTNHM------ 232
P +P AA + G L +A L A A SQL+TN +
Sbjct: 143 LP----SPKCFEAA---DSQNATEFLGSLKLVIPNDADQLKAQAIRSQLQTNSLFSEAST 195
Query: 233 ---------------PRNQNQN--------------QNQHNRNNRDGPSQKTNQQQNQIT 263
P N +Q NQ + + Q Q
Sbjct: 196 AVCQSLLSAAQTGLTPNNHDQTATMQKLLNTPVLQVSNQPTVSTYPKAPVRLTQSVTQHK 255
Query: 264 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIAL 323
EM +PN+L+G +IG+GG KI EIR+ S A I+IS EE+ +R IT+TG+ A+
Sbjct: 256 AEMYIPNDLVGCIIGRGGNKINEIRQTSQANIKISSG---EENLCERRITITGSFPAVQK 312
Query: 324 AQYLINMSVEL 334
AQ +IN SVEL
Sbjct: 313 AQTMINNSVEL 323
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 142/311 (45%), Gaps = 57/311 (18%)
Query: 513 NKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 570
N H Q I LRL+VP CGS+IGKGG +IK +R+++GA++ VAS+ LPNS++
Sbjct: 26 NSHTVDKAAKQYPPITLRLLVPTIHCGSLIGKGGKRIKFLRQSTGAAIQVASESLPNSSD 85
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMG 630
R + I G AV ++ +CL + P+ P P + G I + S M
Sbjct: 86 RTITITGSARAVALCVHHVCLKTLRF--IYGYYPFSP-PSMSSAQGSILRTARIHESTMA 142
Query: 631 APDMGNNPLAGLAALGLGGNSGGGMGGGL------NAAALAALA-SSQLKTNHM------ 677
P +P AA + G L +A L A A SQL+TN +
Sbjct: 143 LP----SPKCFEAA---DSQNATEFLGSLKLVIPNDADQLKAQAIRSQLQTNSLFSEAST 195
Query: 678 ---------------PRNQNQN--------------QNQHNRNNRDGPSQKTNQQQNQIT 708
P N +Q NQ + + Q Q
Sbjct: 196 AVCQSLLSAAQTGLTPNNHDQTATMQKLLNTPVLQVSNQPTVSTYPKAPVRLTQSVTQHK 255
Query: 709 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIAL 768
EM +PN+L+G +IG+GG KI EIR+ S A I+IS EE+ +R IT+TG+ A+
Sbjct: 256 AEMYIPNDLVGCIIGRGGNKINEIRQTSQANIKISSG---EENLCERRITITGSFPAVQK 312
Query: 769 AQYLINMSVEL 779
AQ +IN SVEL
Sbjct: 313 AQTMINNSVEL 323
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 130/302 (43%), Gaps = 51/302 (16%)
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 313
K +Q IT + VP G++IGKGG +I +R+ +GA I++ +SE +S+DRTIT
Sbjct: 32 KAAKQYPPITLRLLVPTIHCGSLIGKGGKRIKFLRQSTGAAIQV--ASESLPNSSDRTIT 89
Query: 314 MTGTPDAIALAQYLINMSVELLR-----------ANLNGEGGGESNMDDFSSDNNLPSSA 362
+TG+ A+AL + ++ ++ LR + + +G S LPS
Sbjct: 90 ITGSARAVALCVH--HVCLKTLRFIYGYYPFSPPSMSSAQGSILRTARIHESTMALPSPK 147
Query: 363 PLAGLNASNP------LAAALP----QL-AQILTKPGALNALTSLSALGGLSDLLGGGSS 411
++ N L +P QL AQ + N+L S ++ LL +
Sbjct: 148 CFEAADSQNATEFLGSLKLVIPNDADQLKAQAIRSQLQTNSLFSEASTAVCQSLLSAAQT 207
Query: 412 GGGSGNSG--------------------GFGGVPQGPNYANIQTTGVQRRMRHIMQGKEV 451
G N P+ P + + Q + + V
Sbjct: 208 GLTPNNHDQTATMQKLLNTPVLQVSNQPTVSTYPKAP--VRLTQSVTQHKAEMYIPNDLV 265
Query: 452 GSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
G IIG+ G + ++R+ S + I IS + + ER +T+ GS ++ +A ++I ++ E H
Sbjct: 266 GCIIGRGGNKINEIRQTSQANIKISSGEENLCERRITITGSFPAVQKAQTMINNSV-ELH 324
Query: 510 KN 511
K+
Sbjct: 325 KH 326
>gi|388854780|emb|CCF51673.1| related to PBP2-PAB1 binding protein [Ustilago hordei]
Length = 446
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 112/185 (60%), Gaps = 10/185 (5%)
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSM 491
+T Q MR ++ + IIGKSG+ + ++R++S +++ IS+ PERI+TV G +
Sbjct: 134 ETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPL 193
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
D++ +AF LI + I + +Q G S+ + +R IVP S+ GS+IGK GS+IK I+
Sbjct: 194 DAVSKAFGLIVRRINDEPFDQPSVPG----SKSVTIRFIVPNSRMGSVIGKQGSKIKEIQ 249
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQ 610
E SGA + MLP STER ++I GV DAV A+Y + I+++ + A + YRP
Sbjct: 250 EASGARLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGTILLEHQDRNANNLAYRP--- 306
Query: 611 NAGGP 615
AGGP
Sbjct: 307 TAGGP 311
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 104/165 (63%), Gaps = 10/165 (6%)
Query: 9 IIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGKSG+ + ++R++S +++ IS+ PERI+TV G +D++ +AF LI + I + +
Sbjct: 154 IIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPLDAVSKAFGLIVRRINDEPFD 213
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
Q G S+ + +R IVP S+ GS+IGK GS+IK I+E SGA + MLP STER
Sbjct: 214 QPSVPG----SKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPGSTER 269
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGP 170
++I GV DAV A+Y + I+++ + A + YRP AGGP
Sbjct: 270 VLSISGVADAVHIAVYYVGTILLEHQDRNANNLAYRP---TAGGP 311
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 133/324 (41%), Gaps = 56/324 (17%)
Query: 71 LGGNGESQLIQ--LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 128
+G + E+Q Q +R ++ S IIGK G I IR+ S A + + S+++P + ER +
Sbjct: 129 VGDSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNI-SEIIPGNPERIL 187
Query: 129 NIKGVPDAVTQAIYQICLIMVDSP------PKGATIPYRPLPQNAGGPGLIGNQFGMQNS 182
+ G DAV++A I + D P P ++ R + N+ +IG Q
Sbjct: 188 TVSGPLDAVSKAFGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKE 247
Query: 183 LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQ 242
+ A G AG A L + G +A +A + H RN N N
Sbjct: 248 IQEA--SGARLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGTILLEHQDRNAN---NL 302
Query: 243 HNRNNRDGPSQKTNQQQNQI--------------------------------------TK 264
R GPS + N T+
Sbjct: 303 AYRPTAGGPSTRPPAPANPYAAAQQPFGYGAHAPPFAGAAAPAVGAGAGAPQLPPGSQTQ 362
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK---SSEEEEDSNDRTITMTGTPDAI 321
++ +PN+L+G +IGKGG+KI EIR +S + I+I + N+R +T+TG P I
Sbjct: 363 QIFIPNDLVGCIIGKGGSKINEIRSMSASQIKIMEPGAGIAAGGGGNERLVTITGPPPNI 422
Query: 322 ALAQYLINMSVELLRANLNGEGGG 345
+A L+ +E + L +GG
Sbjct: 423 QMAVSLLYQRLEQEKMRL-AQGGA 445
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 133/324 (41%), Gaps = 56/324 (17%)
Query: 516 LGGNGESQLIQ--LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 573
+G + E+Q Q +R ++ S IIGK G I IR+ S A + + S+++P + ER +
Sbjct: 129 VGDSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNI-SEIIPGNPERIL 187
Query: 574 NIKGVPDAVTQAIYQICLIMVDSP------PKGATIPYRPLPQNAGGPGLIGNQFGMQNS 627
+ G DAV++A I + D P P ++ R + N+ +IG Q
Sbjct: 188 TVSGPLDAVSKAFGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKE 247
Query: 628 LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQ 687
+ A G AG A L + G +A +A + H RN N N
Sbjct: 248 IQEA--SGARLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGTILLEHQDRNAN---NL 302
Query: 688 HNRNNRDGPSQKTNQQQNQI--------------------------------------TK 709
R GPS + N T+
Sbjct: 303 AYRPTAGGPSTRPPAPANPYAAAQQPFGYGAHAPPFAGAAAPAVGAGAGAPQLPPGSQTQ 362
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK---SSEEEEDSNDRTITMTGTPDAI 766
++ +PN+L+G +IGKGG+KI EIR +S + I+I + N+R +T+TG P I
Sbjct: 363 QIFIPNDLVGCIIGKGGSKINEIRSMSASQIKIMEPGAGIAAGGGGNERLVTITGPPPNI 422
Query: 767 ALAQYLINMSVELLRANLNGEGGG 790
+A L+ +E + L +GG
Sbjct: 423 QMAVSLLYQRLEQEKMRL-AQGGA 445
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 171/375 (45%), Gaps = 51/375 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L+ E+G+ I +S S T ER+ V GS ++L
Sbjct: 36 LKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAEALLS 95
Query: 497 AFSLITKNIEEFHKNQNKHLGG---------NGESQLIQLRLIVPASQCGSIIGKGGSQI 547
+ I + + E + K+ G N E + Q +LIVP + G IIGKGG+ +
Sbjct: 96 VHNFIAEKVREVPQGAPKNDLGVLLPPQSTINAE-RAKQAKLIVPNTTAGLIIGKGGATV 154
Query: 548 KTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT---I 603
+ I E SGA V ++ N ER V + G P V +AI+ I + PP+G T I
Sbjct: 155 RNIMEESGAWVQLSQKPAGSNLHERVVTVSGEPSQVQKAIHSIIHKSREDPPQGTTHLNI 214
Query: 604 PY--------------RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGG 649
Y P A P L Q + G + LA AAL
Sbjct: 215 SYINTQGPVANSNPTGSPYAGGAAEPVLTPFQPAPPAPPAIS---GGDLLAISAALNTLA 271
Query: 650 NSG--GGMG-----GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQ 702
+ G GMG GG++ AA+ LAS + + G T +
Sbjct: 272 SYGYSTGMGYNPLVGGVHPAAVNLLASYTGEAG----PSLGLGGGGILLEKMGAESVTGK 327
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
+ T EM VP L+GA++GKGG + E ++++GA I+ISK E + R +T+TG
Sbjct: 328 E----TLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGP 383
Query: 763 PDAIALAQYLINMSV 777
P A AQYLI V
Sbjct: 384 PGATQAAQYLIGQRV 398
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 167/365 (45%), Gaps = 51/365 (13%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L+ E+G+ I +S S T ER+ V GS ++L + I + +
Sbjct: 46 GSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAEALLSVHNFIAEKVR 105
Query: 62 EFHKNQNKHLGG---------NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
E + K+ G N E + Q +LIVP + G IIGKGG+ ++ I E SGA
Sbjct: 106 EVPQGAPKNDLGVLLPPQSTINAE-RAKQAKLIVPNTTAGLIIGKGGATVRNIMEESGAW 164
Query: 113 VYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT---IPY-------- 160
V ++ N ER V + G P V +AI+ I + PP+G T I Y
Sbjct: 165 VQLSQKPAGSNLHERVVTVSGEPSQVQKAIHSIIHKSREDPPQGTTHLNISYINTQGPVA 224
Query: 161 ------RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSG--GGMG- 211
P A P L Q + G + LA AAL + G GMG
Sbjct: 225 NSNPTGSPYAGGAAEPVLTPFQPAPPAPPAIS---GGDLLAISAALNTLASYGYSTGMGY 281
Query: 212 ----GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMT 267
GG++ AA+ LAS + + G T ++ T EM
Sbjct: 282 NPLVGGVHPAAVNLLASYTGEAG----PSLGLGGGGILLEKMGAESVTGKE----TLEMA 333
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
VP L+GA++GKGG + E ++++GA I+ISK E + R +T+TG P A AQYL
Sbjct: 334 VPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGATQAAQYL 393
Query: 328 INMSV 332
I V
Sbjct: 394 IGQRV 398
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I ++ +GA++ + + D P +TER ++G +A+
Sbjct: 36 LKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAEALL- 94
Query: 140 AIYQICLIMVDSPPKGA 156
+++ V P+GA
Sbjct: 95 SVHNFIAEKVREVPQGA 111
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 37/269 (13%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
P Q T + ++ VPN G +IGKGG + I + SGA +++S+ + ++R
Sbjct: 121 PPQSTINAERAKQAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQKP-AGSNLHER 179
Query: 311 TITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD----NNLPSSAPLAG 366
+T++G P + Q I+ + R + +G N+ ++ N+ P+ +P AG
Sbjct: 180 VVTVSGEPSQV---QKAIHSIIHKSRED-PPQGTTHLNISYINTQGPVANSNPTGSPYAG 235
Query: 367 LNASNPLAAALPQLA---------QILTKPGALNALTSLSALGGL-SDLLGGGSSGGGSG 416
A+ P+ +L ALN L S G+ + L GG
Sbjct: 236 -GAAEPVLTPFQPAPPAPPAISGGDLLAISAALNTLASYGYSTGMGYNPLVGGVHPAAVN 294
Query: 417 NSGGFGGVPQGPNYANIQTTGVQRRM-RHIMQGKE----------VGSIIGKSGETVKKL 465
+ G GP+ + +M + GKE VG+I+GK G+T+ +
Sbjct: 295 LLASYTG-EAGPSLGLGGGGILLEKMGAESVTGKETLEMAVPETLVGAILGKGGKTLVEY 353
Query: 466 REESGSKIYISDS-----STPERIVTVIG 489
+E +G++I IS T R VT+ G
Sbjct: 354 QELTGARIQISKKGEFVPGTRSRKVTITG 382
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 314
T + ++ ++ +P+ G++IGKGG I ++++ +GA I++SKS + + +R +
Sbjct: 27 TAAEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLV 86
Query: 315 TGTPDAIALAQYLINMSV 332
G+ +A+ I V
Sbjct: 87 QGSAEALLSVHNFIAEKV 104
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 700 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 759
T + ++ ++ +P+ G++IGKGG I ++++ +GA I++SKS + + +R +
Sbjct: 27 TAAEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLV 86
Query: 760 TGTPDAIALAQYLINMSV 777
G+ +A+ I V
Sbjct: 87 QGSAEALLSVHNFIAEKV 104
>gi|430813652|emb|CCJ29027.1| unnamed protein product [Pneumocystis jirovecii]
Length = 383
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 177/360 (49%), Gaps = 45/360 (12%)
Query: 421 FGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS-- 478
F G +G Y G Q +R ++ KE G IIG+ G+ V +LR +G K +S
Sbjct: 55 FDGEGRGEEYDGY--GGSQVTLRALVSTKEAGIIIGRQGKNVAELRGANGIKAGVSKVVP 112
Query: 479 STPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGS 538
+ +R++T+ GS+D + +A++ I + + + + + +RL++ + G+
Sbjct: 113 NIHDRVLTISGSLDGVSKAYAAIAQAFIDNPIGHSTNHASSSSEPQSSIRLLISHNMMGT 172
Query: 539 IIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
IIG+ G +IK I++ SGA + ++LP STER V ++GV ++ AI++I ++D
Sbjct: 173 IIGRQGLKIKHIQDLSGARMIAFKEILPQSTERIVEVQGVVSSIQTAIWEIGKCLIDDWE 232
Query: 599 KGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 658
+G IG F NP L++ + G+ G +
Sbjct: 233 RG-----------------IGTVF-------------YNPSLRLSSTLVPGHQGNSI--- 259
Query: 659 LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELI 718
L+ A Q +++ M ++ N H + D +Q Q +++P++++
Sbjct: 260 LSGAQPGHYLQYQRQSSQMNYSRLGNMPSHFQEPLDTSNQDIRVQN------ISIPSDMV 313
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
G +IG+GG+KI EIR+ISG+ I I+K+ +E + +R T+ GT + A Y++ ++E
Sbjct: 314 GCIIGRGGSKISEIRRISGSKISIAKAPHDE--TGERMFTIQGTASSNEKALYMLFQTLE 371
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 166/332 (50%), Gaps = 43/332 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIG+ G+ V +LR +G K +S + +R++T+ GS+D + +A++ I +
Sbjct: 81 KEAGIIIGRQGKNVAELRGANGIKAGVSKVVPNIHDRVLTISGSLDGVSKAYAAIAQAFI 140
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ + + + +RL++ + G+IIG+ G +IK I++ SGA + ++LP
Sbjct: 141 DNPIGHSTNHASSSSEPQSSIRLLISHNMMGTIIGRQGLKIKHIQDLSGARMIAFKEILP 200
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQN 181
STER V ++GV ++ AI++I ++D +G IG F
Sbjct: 201 QSTERIVEVQGVVSSIQTAIWEIGKCLIDDWERG-----------------IGTVF---- 239
Query: 182 SLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQN 241
NP L++ + G+ G + L+ A Q +++ M ++ N
Sbjct: 240 ---------YNPSLRLSSTLVPGHQGNSI---LSGAQPGHYLQYQRQSSQMNYSRLGNMP 287
Query: 242 QHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSS 301
H + D +Q Q +++P++++G +IG+GG+KI EIR+ISG+ I I+K+
Sbjct: 288 SHFQEPLDTSNQDIRVQN------ISIPSDMVGCIIGRGGSKISEIRRISGSKISIAKAP 341
Query: 302 EEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+E + +R T+ GT + A Y++ ++E
Sbjct: 342 HDE--TGERMFTIQGTASSNEKALYMLFQTLE 371
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 163/351 (46%), Gaps = 46/351 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV-IGSMDSLFRAFSL 500
+R ++ K G++IGK GE +K+LR + + + I DSSTPER++ + ++ +L S
Sbjct: 284 LRLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPDSSTPERVLNISCANVATLTDCVSD 343
Query: 501 ITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+ +++ G Q ++R++V SQ G+IIG+ G +IK +R+ +GA + V
Sbjct: 344 LIPRLDD----------GKSGPQEAEVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRV 393
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 620
S+ P STER + G + + AI + I ++P KG Y N
Sbjct: 394 YSECAPLSTERVIQFSGDKEKIVNAIRHVKEICEETPIKGVERLYD------------AN 441
Query: 621 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 680
+ M +L D G NS G+++++ AA N +
Sbjct: 442 NYDMSYAL----DYG----GYTTDRNWRSNSTTRRSSGIHSSSPAASTPHFTGVNEISPM 493
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 739
Q G S + +N I T ++T+P EL G +IGKGG +I IR+ SGA
Sbjct: 494 QAL-----------GYSPMSLYAENLIATVQVTIPKELGGTIIGKGGERINRIREESGAQ 542
Query: 740 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
I + + DS++R IT++GT I L QYL+ + + GG
Sbjct: 543 IVVDPPT---PDSDERIITISGTTSQIKLGQYLLQQCIPCPETHYTDMSGG 590
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 159/344 (46%), Gaps = 46/344 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV-IGSMDSLFRAFSLITKNIEE 62
K G++IGK GE +K+LR + + + I DSSTPER++ + ++ +L S + +++
Sbjct: 291 KSAGAVIGKGGENIKRLRSQYCASVNIPDSSTPERVLNISCANVATLTDCVSDLIPRLDD 350
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
G Q ++R++V SQ G+IIG+ G +IK +R+ +GA + V S+ P
Sbjct: 351 ----------GKSGPQEAEVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRVYSECAPL 400
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNS 182
STER + G + + AI + I ++P KG Y N + M +
Sbjct: 401 STERVIQFSGDKEKIVNAIRHVKEICEETPIKGVERLYD------------ANNYDMSYA 448
Query: 183 LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQ 242
L D G NS G+++++ AA N + Q
Sbjct: 449 L----DYG----GYTTDRNWRSNSTTRRSSGIHSSSPAASTPHFTGVNEISPMQAL---- 496
Query: 243 HNRNNRDGPSQKTNQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSS 301
G S + +N I T ++T+P EL G +IGKGG +I IR+ SGA I + +
Sbjct: 497 -------GYSPMSLYAENLIATVQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPPT 549
Query: 302 EEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
DS++R IT++GT I L QYL+ + + GG
Sbjct: 550 ---PDSDERIITISGTTSQIKLGQYLLQQCIPCPETHYTDMSGG 590
>gi|125660102|gb|ABN49279.1| IP17411p [Drosophila melanogaster]
Length = 300
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 70/89 (78%), Gaps = 4/89 (4%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAMIRIS E E + DR
Sbjct: 38 PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDR 93
Query: 311 TITMTGTPDAIALAQYLINMSVELLRANL 339
TIT++G PD++ALAQYLINMSVEL +ANL
Sbjct: 94 TITISGNPDSVALAQYLINMSVELQKANL 122
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 70/89 (78%), Gaps = 4/89 (4%)
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
P+ + QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAMIRIS E E + DR
Sbjct: 38 PANRAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDR 93
Query: 756 TITMTGTPDAIALAQYLINMSVELLRANL 784
TIT++G PD++ALAQYLINMSVEL +ANL
Sbjct: 94 TITISGNPDSVALAQYLINMSVELQKANL 122
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGV 133
+Q Q + V G IIGKGG++I IR+ SGA + +++ + +T+R + I G
Sbjct: 41 RAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGN 100
Query: 134 PDAVTQAIYQI 144
PD+V A Y I
Sbjct: 101 PDSVALAQYLI 111
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGV 578
+Q Q + V G IIGKGG++I IR+ SGA + +++ + +T+R + I G
Sbjct: 41 RAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGN 100
Query: 579 PDAVTQAIYQI 589
PD+V A Y I
Sbjct: 101 PDSVALAQYLI 111
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 11/63 (17%)
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRR 441
Q+LTKPGAL+AL++LSAL DLL + GN+ G G P GP +QTTGV R
Sbjct: 222 QLLTKPGALSALSNLSAL----DLLNLTT----LGNTNGAGANPGGP---PVQTTGVNRA 270
Query: 442 MRH 444
H
Sbjct: 271 KGH 273
>gi|312079807|ref|XP_003142332.1| hypothetical protein LOAG_06748 [Loa loa]
gi|307762504|gb|EFO21738.1| hypothetical protein LOAG_06748 [Loa loa]
Length = 342
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 154/318 (48%), Gaps = 38/318 (11%)
Query: 15 ETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN 74
E +K+LR E + + + DS TPER++T+ + +++ I ++E ++ + G
Sbjct: 50 ENIKRLRSEFDANLTVPDSQTPERVLTLTATTENISNCLREIIPRLDENREDDHDRRGKK 109
Query: 75 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 134
+ +++++V S G++IG+GGS+IK +RE +GA + V S P STER V + G
Sbjct: 110 ADRPDSEMKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTERIVLLNGEV 169
Query: 135 DAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPL 194
+ + I I ++ + P KG PY P+ + P +I + G PD
Sbjct: 170 EKIIDCINIIIDVLKEIPIKGPVRPYDPMYYD---PDIISDYGGY------VPDRNF--- 217
Query: 195 AGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK 254
++ +G G + G GG + + P ++ + R P
Sbjct: 218 --ISRVGRGRDY--GFGGSVIPS-------------RYPGRDDRYSGMRDMIGRYSPIPA 260
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 314
T ++T+P+EL GA+IGKGG++I +R+ SGA I + ++ DR IT+
Sbjct: 261 MQ------TTQVTIPDELGGAIIGKGGSRINRVREESGAQIEVEP---HRDNGGDRIITI 311
Query: 315 TGTPDAIALAQYLINMSV 332
+GT + I AQYL+ V
Sbjct: 312 SGTREQIQAAQYLLQQCV 329
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 154/318 (48%), Gaps = 38/318 (11%)
Query: 460 ETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN 519
E +K+LR E + + + DS TPER++T+ + +++ I ++E ++ + G
Sbjct: 50 ENIKRLRSEFDANLTVPDSQTPERVLTLTATTENISNCLREIIPRLDENREDDHDRRGKK 109
Query: 520 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 579
+ +++++V S G++IG+GGS+IK +RE +GA + V S P STER V + G
Sbjct: 110 ADRPDSEMKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTERIVLLNGEV 169
Query: 580 DAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPL 639
+ + I I ++ + P KG PY P+ + P +I + G PD
Sbjct: 170 EKIIDCINIIIDVLKEIPIKGPVRPYDPMYYD---PDIISDYGGY------VPDRNF--- 217
Query: 640 AGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK 699
++ +G G + G GG + + P ++ + R P
Sbjct: 218 --ISRVGRGRDY--GFGGSVIPS-------------RYPGRDDRYSGMRDMIGRYSPIPA 260
Query: 700 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 759
T ++T+P+EL GA+IGKGG++I +R+ SGA I + ++ DR IT+
Sbjct: 261 MQ------TTQVTIPDELGGAIIGKGGSRINRVREESGAQIEVEP---HRDNGGDRIITI 311
Query: 760 TGTPDAIALAQYLINMSV 777
+GT + I AQYL+ V
Sbjct: 312 SGTREQIQAAQYLLQQCV 329
>gi|328768620|gb|EGF78666.1| hypothetical protein BATDEDRAFT_26534 [Batrachochytrium
dendrobatidis JAM81]
Length = 493
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 117/204 (57%), Gaps = 9/204 (4%)
Query: 409 GSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR-RMRHIMQGKEVGSIIGKSGETVKKLRE 467
GS G +GG G P+ +N +T + RMR ++ KE G +IGK G V ++R+
Sbjct: 91 GSHGNNYSGNGGQSGRTTAPSDSNAETRESRPIRMRSLISPKEAGVVIGKGGSHVVEIRD 150
Query: 468 ESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLI-TKNIEEFHKNQNKHLGGNGESQL 524
+GS++ +S +R+VTV+G+ ++ RA+ +I TK + H NQN + +S+
Sbjct: 151 TTGSRVTVSGQVPGVFDRVVTVLGAAEANGRAYMMISTKLAGQQHDNQNT----DPQSRT 206
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LRL+VP S+ G IIG+ G +IK I+E SG V D LPNSTER V + G P +
Sbjct: 207 VTLRLLVPQSRIGYIIGRQGVRIKEIQEVSGCRVLAQGDPLPNSTERVVTVIGTPSCLEI 266
Query: 585 AIYQICLIMVDSPPKGA-TIPYRP 607
A+ +ICL++ + K TI Y P
Sbjct: 267 AVTRICLLVGEVNDKHTDTILYSP 290
Score = 106 bits (264), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 98/163 (60%), Gaps = 8/163 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLI-TKNI 60
KE G +IGK G V ++R+ +GS++ +S +R+VTV+G+ ++ RA+ +I TK
Sbjct: 132 KEAGVVIGKGGSHVVEIRDTTGSRVTVSGQVPGVFDRVVTVLGAAEANGRAYMMISTKLA 191
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+ H NQN + +S+ + LRL+VP S+ G IIG+ G +IK I+E SG V D L
Sbjct: 192 GQQHDNQNT----DPQSRTVTLRLLVPQSRIGYIIGRQGVRIKEIQEVSGCRVLAQGDPL 247
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
PNSTER V + G P + A+ +ICL++ + K TI Y P
Sbjct: 248 PNSTERVVTVIGTPSCLEIAVTRICLLVGEVNDKHTDTILYSP 290
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES+ I++R ++ + G +IGKGGS + IR+T+G+ V V S +P +R V + G +
Sbjct: 119 ESRPIRMRSLISPKEAGVVIGKGGSHVVEIRDTTGSRVTV-SGQVPGVFDRVVTVLGAAE 177
Query: 136 AVTQAIYQICLIMV-------DSPPKGATIPYRPL-PQNAGGPGLIGNQ 176
A +A I + ++ P+ T+ R L PQ+ G +IG Q
Sbjct: 178 ANGRAYMMISTKLAGQQHDNQNTDPQSRTVTLRLLVPQSRIGY-IIGRQ 225
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 100/166 (60%), Gaps = 5/166 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ + G++IGK GE++K+LR E + + I DS TPERIVT++ +D++ R + I
Sbjct: 40 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTPERIVTIVAEIDNVIRCVNEI 99
Query: 502 TKNIEEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
++E K ++ G+ GES+L RL+V S G+IIG+GG +IK +RE + +
Sbjct: 100 IPRLDECLKTRDSDDEGSARGESEL---RLLVHQSHAGAIIGRGGYRIKELREETSTQLK 156
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
V S P STER + I GVP+ + + I ++ + P KG + PY
Sbjct: 157 VYSQCCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSRPY 202
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 5/156 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK GE++K+LR E + + I DS TPERIVT++ +D++ R + I ++E K
Sbjct: 50 GAVIGKGGESIKRLRAECDATLTIPDSQTPERIVTIVAEIDNVIRCVNEIIPRLDECLKT 109
Query: 67 QNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 124
++ G+ GES+L RL+V S G+IIG+GG +IK +RE + + V S P ST
Sbjct: 110 RDSDDEGSARGESEL---RLLVHQSHAGAIIGRGGYRIKELREETSTQLKVYSQCCPQST 166
Query: 125 EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
ER + I GVP+ + + I ++ + P KG + PY
Sbjct: 167 ERVIQIIGVPEKIIACVILIINMLKEIPIKGPSRPY 202
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T ++T+PNEL G +IGKGG +I IR+ SGA I + E ++ +++R IT++G+ I
Sbjct: 270 TTQVTIPNELGGTIIGKGGERINRIREESGAHIVV----EPQQPNSERIITISGSHAQIQ 325
Query: 323 LAQYLINMSV 332
AQYL+ +
Sbjct: 326 TAQYLLQQWI 335
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T ++T+PNEL G +IGKGG +I IR+ SGA I + E ++ +++R IT++G+ I
Sbjct: 270 TTQVTIPNELGGTIIGKGGERINRIREESGAHIVV----EPQQPNSERIITISGSHAQIQ 325
Query: 768 LAQYLINMSV 777
AQYL+ +
Sbjct: 326 TAQYLLQQWI 335
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 81 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
+LRL+VP+ G++IGKGG IK +R A++ + P ER V I D V +
Sbjct: 39 ELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTP---ERIVTIVAEIDNVIRC 95
Query: 141 IYQI------CLIMVDSPPKGA 156
+ +I CL DS +G+
Sbjct: 96 VNEIIPRLDECLKTRDSDDEGS 117
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 7 GSIIGKSGETVKKLREESGSKIYIS-DSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
G+IIGK GE + ++REESG+ I + ERI+T+ GS + A L+ + I F
Sbjct: 281 GTIIGKGGERINRIREESGAHIVVEPQQPNSERIITISGSHAQIQTAQYLLQQWIVRF 338
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 452 GSIIGKSGETVKKLREESGSKIYIS-DSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
G+IIGK GE + ++REESG+ I + ERI+T+ GS + A L+ + I F
Sbjct: 281 GTIIGKGGERINRIREESGAHIVVEPQQPNSERIITISGSHAQIQTAQYLLQQWIVRF 338
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 100/166 (60%), Gaps = 5/166 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ + G++IGK GE++K+LR E + + I DS TPERIVT++ +D++ R + I
Sbjct: 107 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTPERIVTIVAEIDNVIRCVNEI 166
Query: 502 TKNIEEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
++E K ++ G+ GES+L RL+V S G+IIG+GG +IK +RE + +
Sbjct: 167 IPRLDECLKTRDSDDEGSARGESEL---RLLVHQSHAGAIIGRGGYRIKELREETSTQLK 223
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
V S P STER + I GVP+ + + I ++ + P KG + PY
Sbjct: 224 VYSQCCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSRPY 269
Score = 113 bits (283), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 5/156 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK GE++K+LR E + + I DS TPERIVT++ +D++ R + I ++E K
Sbjct: 117 GAVIGKGGESIKRLRAECDATLTIPDSQTPERIVTIVAEIDNVIRCVNEIIPRLDECLKT 176
Query: 67 QNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 124
++ G+ GES+L RL+V S G+IIG+GG +IK +RE + + V S P ST
Sbjct: 177 RDSDDEGSARGESEL---RLLVHQSHAGAIIGRGGYRIKELREETSTQLKVYSQCCPQST 233
Query: 125 EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
ER + I GVP+ + + I ++ + P KG + PY
Sbjct: 234 ERVIQIIGVPEKIIACVILIINMLKEIPIKGPSRPY 269
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T ++T+PNEL G +IGKGG +I IR+ SGA I + E ++ +++R IT++G+ I
Sbjct: 337 TTQVTIPNELGGTIIGKGGERINRIREESGAHIVV----EPQQPNSERIITISGSHAQIQ 392
Query: 323 LAQYLINMSV 332
AQYL+ V
Sbjct: 393 TAQYLLQQCV 402
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T ++T+PNEL G +IGKGG +I IR+ SGA I + E ++ +++R IT++G+ I
Sbjct: 337 TTQVTIPNELGGTIIGKGGERINRIREESGAHIVV----EPQQPNSERIITISGSHAQIQ 392
Query: 768 LAQYLINMSV 777
AQYL+ V
Sbjct: 393 TAQYLLQQCV 402
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 81 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
+LRL+VP+ G++IGKGG IK +R A++ + P ER V I D V +
Sbjct: 106 ELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTP---ERIVTIVAEIDNVIRC 162
Query: 141 IYQI------CLIMVDSPPKGA 156
+ +I CL DS +G+
Sbjct: 163 VNEIIPRLDECLKTRDSDDEGS 184
>gi|346473549|gb|AEO36619.1| hypothetical protein [Amblyomma maculatum]
Length = 320
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 5/166 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q + G+IIGK G + LR+E + I + D PERI++++ +D+L I
Sbjct: 41 VRFLLQSRNAGAIIGKGGTNINSLRKEFKASISVPDCPGPERILSIVADLDTLGDILLNI 100
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+++F +H G NG S+ ++RL++ S G IIG+ G +IK +RE++GA++ V
Sbjct: 101 IPKLDDF----AQHTGQNGGSES-EMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVH 155
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
P STER V + G P V I QIC I+ +P KG PY P
Sbjct: 156 GSCCPGSTERIVKVTGSPAVVVDCIKQICDIIGVAPIKGLNKPYDP 201
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q + G+IIGK G + LR+E + I + D PERI++++ +D+L I +
Sbjct: 45 LQSRNAGAIIGKGGTNINSLRKEFKASISVPDCPGPERILSIVADLDTLGDILLNIIPKL 104
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
++F +H G NG S+ ++RL++ S G IIG+ G +IK +RE++GA++ V
Sbjct: 105 DDF----AQHTGQNGGSES-EMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGSCC 159
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P STER V + G P V I QIC I+ +P KG PY P
Sbjct: 160 PGSTERIVKVTGSPAVVVDCIKQICDIIGVAPIKGLNKPYDP 201
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGS 490
Q G + MR +M G IIG++G +K+LRE +G+ I + S P ERIV V GS
Sbjct: 113 QNGGSESEMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGSCCPGSTERIVKVTGS 172
>gi|313229517|emb|CBY18332.1| unnamed protein product [Oikopleura dioica]
Length = 488
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 107/185 (57%), Gaps = 10/185 (5%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS-DSSTPERIVTVIGSMDSLFRAFSL 500
+R + +G +VG++IG+ G + ++REESG ++ I + ERIV+V GS + RA
Sbjct: 25 IRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKIKGNEKDIERIVSVSGSPAGVTRAIGK 84
Query: 501 ITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+ + +E + N L G + L +IVP QCGSIIGKGG +IK IRE +G +V +
Sbjct: 85 VGEFVE---ADLNDGLTGRTTKIPVTLHMIVPTGQCGSIIGKGGFRIKEIREKTGCNVKI 141
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 620
A+++LP STE+ + + G P + Q + IC +M++ + PY P + GP +
Sbjct: 142 ANELLPASTEKLITLYGEPRVIQQCVGSICQVMIEEGQERKCTPYTPA---SYGPSPV-- 196
Query: 621 QFGMQ 625
FGM+
Sbjct: 197 -FGME 200
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 104/181 (57%), Gaps = 10/181 (5%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYIS-DSSTPERIVTVIGSMDSLFRAFSLITKN 59
+G +VG++IG+ G + ++REESG ++ I + ERIV+V GS + RA + +
Sbjct: 29 FKGNQVGTLIGRKGSKIMQIREESGCEVKIKGNEKDIERIVSVSGSPAGVTRAIGKVGEF 88
Query: 60 IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
+E + N L G + L +IVP QCGSIIGKGG +IK IRE +G +V +A+++
Sbjct: 89 VE---ADLNDGLTGRTTKIPVTLHMIVPTGQCGSIIGKGGFRIKEIREKTGCNVKIANEL 145
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
LP STE+ + + G P + Q + IC +M++ + PY P + GP + FGM
Sbjct: 146 LPASTEKLITLYGEPRVIQQCVGSICQVMIEEGQERKCTPYTPA---SYGPSPV---FGM 199
Query: 180 Q 180
+
Sbjct: 200 E 200
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+ +Q LG + + + +RL+ +Q G++IG+ GS+I IRE SG V + +
Sbjct: 8 YDNSQQDELGDD--TICVTIRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKIKGNE--K 63
Query: 123 STEREVNIKGVPDAVTQAI 141
ER V++ G P VT+AI
Sbjct: 64 DIERIVSVSGSPAGVTRAI 82
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
+ +Q LG + + + +RL+ +Q G++IG+ GS+I IRE SG V + +
Sbjct: 8 YDNSQQDELGDD--TICVTIRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKIKGNE--K 63
Query: 568 STEREVNIKGVPDAVTQAI 586
ER V++ G P VT+AI
Sbjct: 64 DIERIVSVSGSPAGVTRAI 82
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ V +GAVIG+GG++I E+R +S I+I E + DS R IT++G + I A
Sbjct: 306 EVHVDKTCMGAVIGRGGSRIGEVRMLSTHDIKI---HEVDGDSTFRRITISGDKNHIDKA 362
Query: 325 QYLINMSVELL 335
L+++ V +
Sbjct: 363 VLLLHVCVNVF 373
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ V +GAVIG+GG++I E+R +S I+I E + DS R IT++G + I A
Sbjct: 306 EVHVDKTCMGAVIGRGGSRIGEVRMLSTHDIKI---HEVDGDSTFRRITISGDKNHIDKA 362
Query: 770 QYLINMSVELL 780
L+++ V +
Sbjct: 363 VLLLHVCVNVF 373
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T M VP G++IGKGG +I EIR+ +G ++I ++E S ++ IT+ G P I
Sbjct: 106 VTLHMIVPTGQCGSIIGKGGFRIKEIREKTGCNVKI--ANELLPASTEKLITLYGEPRVI 163
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T M VP G++IGKGG +I EIR+ +G ++I ++E S ++ IT+ G P I
Sbjct: 106 VTLHMIVPTGQCGSIIGKGGFRIKEIREKTGCNVKI--ANELLPASTEKLITLYGEPRVI 163
>gi|427784321|gb|JAA57612.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Rhipicephalus
pulchellus]
Length = 334
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q + G+IIGK G + LR+E + I + D PERI++++ +D+L I
Sbjct: 40 VRFLLQSRNAGAIIGKGGSNINSLRKEFKASISVPDCPGPERILSIVADLDTLGEILLNI 99
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+++ +H G NG S+ ++RL++ S G IIG+ G +IK +RE++GA++ V
Sbjct: 100 IPKLDDRSMQFAQHTGQNGGSES-EMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVH 158
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
P STER V + G P V I QIC I+ +P KG PY P
Sbjct: 159 GSCCPGSTERIVKVTGSPSVVVDCIKQICDIVGVAPIKGLNKPYDP 204
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q + G+IIGK G + LR+E + I + D PERI++++ +D+L I +
Sbjct: 44 LQSRNAGAIIGKGGSNINSLRKEFKASISVPDCPGPERILSIVADLDTLGEILLNIIPKL 103
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
++ +H G NG S+ ++RL++ S G IIG+ G +IK +RE++GA++ V
Sbjct: 104 DDRSMQFAQHTGQNGGSES-EMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGSCC 162
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P STER V + G P V I QIC I+ +P KG PY P
Sbjct: 163 PGSTERIVKVTGSPSVVVDCIKQICDIVGVAPIKGLNKPYDP 204
>gi|195592300|ref|XP_002085873.1| GD15007 [Drosophila simulans]
gi|194197882|gb|EDX11458.1| GD15007 [Drosophila simulans]
Length = 180
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 83/129 (64%), Gaps = 24/129 (18%)
Query: 212 GGLN-AAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 270
GG+N AALAALA SQL+T + P+ + QQQ+ EMTV N
Sbjct: 56 GGINHTAALAALAGSQLRTAN-------------------PANRAQQQQH----EMTVSN 92
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
+LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM
Sbjct: 93 DLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINM 152
Query: 331 SVELLRANL 339
+ + A L
Sbjct: 153 RISMETAGL 161
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 83/129 (64%), Gaps = 24/129 (18%)
Query: 657 GGLN-AAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
GG+N AALAALA SQL+T + P+ + QQQ+ EMTV N
Sbjct: 56 GGINHTAALAALAGSQLRTAN-------------------PANRAQQQQH----EMTVSN 92
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
+LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM
Sbjct: 93 DLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINM 152
Query: 776 SVELLRANL 784
+ + A L
Sbjct: 153 RISMETAGL 161
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGV 133
+Q Q + V G IIGKGG++I IR+ SGA + + + +T+R + I G
Sbjct: 80 RAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGN 139
Query: 134 PDAVTQAIYQI 144
PD+V A Y I
Sbjct: 140 PDSVALAQYLI 150
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGV 578
+Q Q + V G IIGKGG++I IR+ SGA + + + +T+R + I G
Sbjct: 80 RAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGN 139
Query: 579 PDAVTQAIYQI 589
PD+V A Y I
Sbjct: 140 PDSVALAQYLI 150
>gi|331232797|ref|XP_003329060.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308050|gb|EFP84641.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 106/170 (62%), Gaps = 7/170 (4%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAF 498
+MR ++ ++ IIGK G + ++RE+SG++ IS++ ERI++V G +D++ +AF
Sbjct: 107 QMRALIVTQDASIIIGKGGRHINEVREKSGARATISEAVPGNAERILSVAGPLDAVSKAF 166
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I + + G S+ + +R IVP S+ GS+IGK GS+IK I++ SGA V
Sbjct: 167 GLIVRRINDEPFDVPSVPG----SRAVTIRFIVPNSRMGSVIGKAGSKIKEIQDMSGARV 222
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK-GATIPYRP 607
+ +LP STER ++I GV DAV A+Y + +I+VD+ + A YRP
Sbjct: 223 QASEALLPGSTERVLSISGVADAVHIAVYYVGMILVDNQERMPANTSYRP 272
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 7/157 (4%)
Query: 9 IIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G + ++RE+SG++ IS++ ERI++V G +D++ +AF LI + I + +
Sbjct: 120 IIGKGGRHINEVREKSGARATISEAVPGNAERILSVAGPLDAVSKAFGLIVRRINDEPFD 179
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + +R IVP S+ GS+IGK GS+IK I++ SGA V + +LP STER
Sbjct: 180 VPSVPG----SRAVTIRFIVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEALLPGSTER 235
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPK-GATIPYRP 162
++I GV DAV A+Y + +I+VD+ + A YRP
Sbjct: 236 VLSISGVADAVHIAVYYVGMILVDNQERMPANTSYRP 272
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T VPN +G+VIGK G+KI EI+ +SGA R+ S S +R ++++G DA+
Sbjct: 189 VTIRFIVPNSRMGSVIGKAGSKIKEIQDMSGA--RVQASEALLPGSTERVLSISGVADAV 246
Query: 322 ALAQYLINM 330
+A Y + M
Sbjct: 247 HIAVYYVGM 255
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T VPN +G+VIGK G+KI EI+ +SGA R+ S S +R ++++G DA+
Sbjct: 189 VTIRFIVPNSRMGSVIGKAGSKIKEIQDMSGA--RVQASEALLPGSTERVLSISGVADAV 246
Query: 767 ALAQYLINM 775
+A Y + M
Sbjct: 247 HIAVYYVGM 255
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
+Q IQ+R ++ IIGKGG I +RE SGA + S+ +P + ER +++ G DA
Sbjct: 103 TQTIQMRALIVTQDASIIIGKGGRHINEVREKSGARATI-SEAVPGNAERILSVAGPLDA 161
Query: 137 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
V++A I + D P ++P G + +F + NS MG+
Sbjct: 162 VSKAFGLIVRRINDEPFDVPSVP---------GSRAVTIRFIVPNSRMGS 202
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
+Q IQ+R ++ IIGKGG I +RE SGA + S+ +P + ER +++ G DA
Sbjct: 103 TQTIQMRALIVTQDASIIIGKGGRHINEVREKSGARATI-SEAVPGNAERILSVAGPLDA 161
Query: 582 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 631
V++A I + D P ++P G + +F + NS MG+
Sbjct: 162 VSKAFGLIVRRINDEPFDVPSVP---------GSRAVTIRFIVPNSRMGS 202
>gi|405957027|gb|EKC23265.1| Heterogeneous nuclear ribonucleoprotein K [Crassostrea gigas]
Length = 594
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 7/172 (4%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR 496
G + +R ++ K G+IIGK G +K+LR++ + + + DS++PER++T+ ++ +
Sbjct: 75 GPKVELRFLLASKNAGAIIGKGGSNIKRLRQDYKASVTVPDSTSPERVLTIGANLGTALE 134
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
I +E++ +N ++RL+V SQ G IIG+ G +IK +RE +GA
Sbjct: 135 CVLDIIPKLEDYKNYKNNDFD-------CEMRLLVHQSQAGCIIGRAGFKIKELRERTGA 187
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
+ V S P STER V I G P V I I ++ +PPKG PY PL
Sbjct: 188 QIKVYSQCCPESTERVVAIGGKPKIVVDCIETIHDLLQTAPPKGPNQPYDPL 239
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ K G+IIGK G +K+LR++ + + + DS++PER++T+ ++ + I +
Sbjct: 84 LASKNAGAIIGKGGSNIKRLRQDYKASVTVPDSTSPERVLTIGANLGTALECVLDIIPKL 143
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E++ +N ++RL+V SQ G IIG+ G +IK +RE +GA + V S
Sbjct: 144 EDYKNYKNNDFD-------CEMRLLVHQSQAGCIIGRAGFKIKELRERTGAQIKVYSQCC 196
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
P STER V I G P V I I ++ +PPKG PY PL
Sbjct: 197 PESTERVVAIGGKPKIVVDCIETIHDLLQTAPPKGPNQPYDPL 239
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 243 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 302
+++N G Q + N + ++T+P +L GA+IGKGG +I EIR+ S A I I E
Sbjct: 452 FSQDNSGGMGQMFGNEGNLPSTQVTIPKDLAGAIIGKGGARIQEIRRQSNAQIVI---DE 508
Query: 303 EEEDSNDRTITMTGTPDAIALAQYLI 328
SNDR IT+TGT + I AQ+L+
Sbjct: 509 GLPGSNDRIITITGTHEQIQSAQFLL 534
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 688 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 747
+++N G Q + N + ++T+P +L GA+IGKGG +I EIR+ S A I I E
Sbjct: 452 FSQDNSGGMGQMFGNEGNLPSTQVTIPKDLAGAIIGKGGARIQEIRRQSNAQIVI---DE 508
Query: 748 EEEDSNDRTITMTGTPDAIALAQYLI 773
SNDR IT+TGT + I AQ+L+
Sbjct: 509 GLPGSNDRIITITGTHEQIQSAQFLL 534
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP-- 481
+P+ +Y N + MR ++ + G IIG++G +K+LRE +G++I + P
Sbjct: 140 IPKLEDYKNYKNNDFDCEMRLLVHQSQAGCIIGRAGFKIKELRERTGAQIKVYSQCCPES 199
Query: 482 -ERIVTV 487
ER+V +
Sbjct: 200 TERVVAI 206
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E L ++ +P G+IIGKGG++I+ IR S A + V + LP S +R + I G +
Sbjct: 467 EGNLPSTQVTIPKDLAGAIIGKGGARIQEIRRQSNAQI-VIDEGLPGSNDRIITITGTHE 525
Query: 136 AVTQAIY 142
+ A +
Sbjct: 526 QIQSAQF 532
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
E L ++ +P G+IIGKGG++I+ IR S A + V + LP S +R + I G +
Sbjct: 467 EGNLPSTQVTIPKDLAGAIIGKGGARIQEIRRQSNAQI-VIDEGLPGSNDRIITITGTHE 525
Query: 581 AVTQAIY 587
+ A +
Sbjct: 526 QIQSAQF 532
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 70 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 127
H G+ ++LR ++ + G+IIGKGGS IK +R+ ASV V P+ST E
Sbjct: 68 HKRRRGDGPKVELRFLLASKNAGAIIGKGGSNIKRLRQDYKASVTV-----PDSTSPE 120
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 515 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 572
H G+ ++LR ++ + G+IIGKGGS IK +R+ ASV V P+ST E
Sbjct: 68 HKRRRGDGPKVELRFLLASKNAGAIIGKGGSNIKRLRQDYKASVTV-----PDSTSPE 120
>gi|260814700|ref|XP_002602052.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
gi|229287357|gb|EEN58064.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
Length = 499
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 96/167 (57%), Gaps = 3/167 (1%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G+IIGK G +K+LR E + + + D + PERI+T+ +++ I
Sbjct: 45 LRILLQSKNAGAIIGKQGLNIKRLRSEYKATVTVPDCTGPERILTISADLNTACACLLDI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+E++ K+ +H N +L R++V SQ G IIG+ G +IK +RE + A++ V
Sbjct: 105 IPVLEDYQKHYQEHKDLNFNCEL---RMLVHQSQAGCIIGRAGFKIKELREQTEANIKVY 161
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
S+ +P STER V + G P+ AI +I ++ +P KG IPY P
Sbjct: 162 SECMPGSTERVVALTGKPEKCVGAIKKIIELLQKAPIKGQNIPYDPF 208
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 93/163 (57%), Gaps = 3/163 (1%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G+IIGK G +K+LR E + + + D + PERI+T+ +++ I +
Sbjct: 49 LQSKNAGAIIGKQGLNIKRLRSEYKATVTVPDCTGPERILTISADLNTACACLLDIIPVL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E++ K+ +H N +L R++V SQ G IIG+ G +IK +RE + A++ V S+ +
Sbjct: 109 EDYQKHYQEHKDLNFNCEL---RMLVHQSQAGCIIGRAGFKIKELREQTEANIKVYSECM 165
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
P STER V + G P+ AI +I ++ +P KG IPY P
Sbjct: 166 PGSTERVVALTGKPEKCVGAIKKIIELLQKAPIKGQNIPYDPF 208
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
N + ++T+P EL G++IG+GG++I IR+ S A I+I E S DR IT++G D
Sbjct: 406 NITSTQVTIPKELAGSIIGRGGSRIRTIRERSEAQIKI---DEPLPGSTDRIITISGDND 462
Query: 320 AIALAQYLINMSVEL 334
I AQ+L+ S +
Sbjct: 463 QIRNAQFLLQESCSV 477
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
N + ++T+P EL G++IG+GG++I IR+ S A I+I E S DR IT++G D
Sbjct: 406 NITSTQVTIPKELAGSIIGRGGSRIRTIRERSEAQIKI---DEPLPGSTDRIITISGDND 462
Query: 765 AIALAQYLINMSVEL 779
I AQ+L+ S +
Sbjct: 463 QIRNAQFLLQESCSV 477
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 84 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+ +P GSIIG+GGS+I+TIRE S A + + + LP ST+R + I G D + A +
Sbjct: 412 VTIPKELAGSIIGRGGSRIRTIRERSEAQIKI-DEPLPGSTDRIITISGDNDQIRNAQF 469
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 529 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+ +P GSIIG+GGS+I+TIRE S A + + + LP ST+R + I G D + A +
Sbjct: 412 VTIPKELAGSIIGRGGSRIRTIRERSEAQIKI-DEPLPGSTDRIITISGDNDQIRNAQF 469
>gi|401885149|gb|EJT49276.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 2479]
gi|406694587|gb|EKC97911.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 8904]
Length = 351
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 171/346 (49%), Gaps = 40/346 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
+R ++ KE G IIGK G T+ +R+ + K +S +R+++V G +++ A++
Sbjct: 21 LRSLVSTKEAGIIIGKGGATIANIRQVANCKAGVSKVVPGVQDRVLSVSGDPEAIAAAYA 80
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+ + + E + + + +Q +RL++ + G++IG+ G +IK I++ SGA +
Sbjct: 81 EVARLLLETPLS-DSSMPPPPVNQFTSIRLLISHNLMGTVIGRAGVKIKQIQDMSGARMV 139
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ +MLP STER V ++G DA+ AI++I CL + D T+ Y PG
Sbjct: 140 ASKEMLPQSTERVVEVQGAQDAIKTAIFEIAKCL-LEDWERNTGTVQYH--------PGA 190
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G+ AG+ A GLG + G GG+ ++ S N
Sbjct: 191 AGD-------------------AGVLAGGLGAQAVTGPTGGIRRTSMGGFGSGSPGPNFN 231
Query: 678 PRNQNQNQNQ-----HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
++ ++ + R SQ N T+ +++P++++G +IG+GGTKI EI
Sbjct: 232 NSDRRVSRGSISGGTSGQERRVSESQPVLNDPNLRTQNISIPSDMVGCIIGRGGTKITEI 291
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
R++SG+ I I+K +E + +R T+ GT ++ A L+ +E
Sbjct: 292 RRLSGSRISIAKVPHDE--TGERMFTIVGTAESTERALMLLYSQLE 335
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 167/339 (49%), Gaps = 40/339 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G T+ +R+ + K +S +R+++V G +++ A++ + + +
Sbjct: 28 KEAGIIIGKGGATIANIRQVANCKAGVSKVVPGVQDRVLSVSGDPEAIAAAYAEVARLLL 87
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E + + + +Q +RL++ + G++IG+ G +IK I++ SGA + + +MLP
Sbjct: 88 ETPLS-DSSMPPPPVNQFTSIRLLISHNLMGTVIGRAGVKIKQIQDMSGARMVASKEMLP 146
Query: 122 NSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
STER V ++G DA+ AI++I CL + D T+ Y PG G+
Sbjct: 147 QSTERVVEVQGAQDAIKTAIFEIAKCL-LEDWERNTGTVQYH--------PGAAGD---- 193
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
AG+ A GLG + G GG+ ++ S N ++ +
Sbjct: 194 ---------------AGVLAGGLGAQAVTGPTGGIRRTSMGGFGSGSPGPNFNNSDRRVS 238
Query: 240 QNQ-----HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
+ + R SQ N T+ +++P++++G +IG+GGTKI EIR++SG+
Sbjct: 239 RGSISGGTSGQERRVSESQPVLNDPNLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSR 298
Query: 295 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I I+K +E + +R T+ GT ++ A L+ +E
Sbjct: 299 ISIAKVPHDE--TGERMFTIVGTAESTERALMLLYSQLE 335
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 112/289 (38%), Gaps = 76/289 (26%)
Query: 260 NQITK-EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
NQ T + + + L+G VIG+ G KI +I+ +SGA R+ S E S +R + + G
Sbjct: 102 NQFTSIRLLISHNLMGTVIGRAGVKIKQIQDMSGA--RMVASKEMLPQSTERVVEVQGAQ 159
Query: 319 DAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALP 378
DAI A + I + ++D+ +
Sbjct: 160 DAIKTAIFEIAKCL----------------LEDWERNT---------------------- 181
Query: 379 QLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNS----------GGFGGVPQGP 428
+ PGA L+ GGL G +GG S F +
Sbjct: 182 --GTVQYHPGAAGDAGVLA--GGLGAQAVTGPTGGIRRTSMGGFGSGSPGPNFNNSDRRV 237
Query: 429 NYANIQ--TTGVQRRMRH---------------IMQGKEVGSIIGKSGETVKKLREESGS 471
+ +I T+G +RR+ + VG IIG+ G + ++R SGS
Sbjct: 238 SRGSISGGTSGQERRVSESQPVLNDPNLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGS 297
Query: 472 KIYISD---SSTPERIVTVIGSMDSLFRAFSLITKNIE-EFHKNQNKHL 516
+I I+ T ER+ T++G+ +S RA L+ +E E + N+ +
Sbjct: 298 RISIAKVPHDETGERMFTIVGTAESTERALMLLYSQLESEKERRVNQSI 346
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 201/451 (44%), Gaps = 88/451 (19%)
Query: 374 AAALPQLAQIL----TKPGALNALTSLSALGGLSDLLGGGSSGGGS--------GNSGGF 421
++AL QL ++ T A+N +T+ G+S +G +S G S N +
Sbjct: 128 SSALGQLGSLINAYGTSTPAINPITN----SGVSQAIGTTTSYGTSQAYDPVPFANHLDY 183
Query: 422 GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--S 479
P + A ++ R KE +IGK G+ + LRE++ ++I +S++
Sbjct: 184 TSRPMANHQAERESDPTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKD 243
Query: 480 TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
ERI++V G +++ +AF LIT+ I E +++ + S+ L++++P G I
Sbjct: 244 VQERIISVKGPAENVAKAFGLITRAILEEPEDEPASIM----SRQYNLKVLIPHPMVGYI 299
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV---DS 596
IGKGGS+ + I E S A + A LPNST+R +++ GV DA+ AIY I +++ D
Sbjct: 300 IGKGGSKFREIEENSAAKLKAAEQPLPNSTDRVLSVLGVGDAIHIAIYYISQVIIEHKDI 359
Query: 597 PPKGATIPYRPLPQNAGGPGLIGNQFGM--QNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
K + Y P G L+ N G+ N+ +GN+P+ G A
Sbjct: 360 LKKHKIVYYTP-----GNNQLMNNTMGLIPNNTYGNTGIIGNDPIQGGAPF--------- 405
Query: 655 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------- 704
++ R + HN+ P+Q +
Sbjct: 406 -------------------QHNYQRQFQPSAPSHNQITTPVPTQSYTDEHGNTMIGDVIT 446
Query: 705 ----------NQITKEMTVPNELIGAVIGKGGTKIFEIRKISG-AMIRISKSSEE----- 748
++ ++++ V N IG+VIGKGG I +IR+ SG + ++I +
Sbjct: 447 SVPVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVKIEPDQHQTIMLG 506
Query: 749 --EEDSNDRTITMTGTPDAIALAQYLINMSV 777
++ R +T+TG+ ++I A YLIN +
Sbjct: 507 RGRGLTSIRKLTLTGSINSIQTAIYLINQRI 537
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 169/364 (46%), Gaps = 72/364 (19%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +IGK G+ + LRE++ ++I +S++ ERI++V G +++ +AF LIT+ I
Sbjct: 211 KEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIISVKGPAENVAKAFGLITRAIL 270
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E +++ + S+ L++++P G IIGKGGS+ + I E S A + A LP
Sbjct: 271 EEPEDEPASIM----SRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKAAEQPLP 326
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
NST+R +++ GV DA+ AIY I +++ D K + Y P G L+ N G
Sbjct: 327 NSTDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKHKIVYYTP-----GNNQLMNNTMG 381
Query: 179 M--QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+ N+ +GN+P+ G A ++ R
Sbjct: 382 LIPNNTYGNTGIIGNDPIQGGAPF----------------------------QHNYQRQF 413
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQ--------------------NQITKEMTVPNELIGAV 276
+ HN+ P+Q + ++ ++++ V N IG+V
Sbjct: 414 QPSAPSHNQITTPVPTQSYTDEHGNTMIGDVITSVPVPAGTGTDKFSEDVFVANTNIGSV 473
Query: 277 IGKGGTKIFEIRKISG-AMIRISKSSEE-------EEDSNDRTITMTGTPDAIALAQYLI 328
IGKGG I +IR+ SG + ++I + ++ R +T+TG+ ++I A YLI
Sbjct: 474 IGKGGNNIKQIRESSGCSYVKIEPDQHQTIMLGRGRGLTSIRKLTLTGSINSIQTAIYLI 533
Query: 329 NMSV 332
N +
Sbjct: 534 NQRI 537
>gi|406697218|gb|EKD00483.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 8904]
Length = 793
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 119/217 (54%), Gaps = 28/217 (12%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFR 496
Q MR ++ ++ IIG++G V ++RE+SG+++ IS+S PERI+ V G++D++ +
Sbjct: 87 QISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGALDAVSK 146
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF LI + I ++ + S+ + ++ I+P S+ GS+IG+GGS+IK I++ SGA
Sbjct: 147 AFGLIVRRI----NDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGA 202
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP-----PKGATIPYRPLPQ- 610
+ + MLP STER +++ GV DA+ A+Y I I+++ P YR PQ
Sbjct: 203 RLNASEVMLPGSTERILSVSGVADAIHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQG 262
Query: 611 ----------------NAGGPGLIGNQFGMQNSLMGA 631
A PG Q + NSL+GA
Sbjct: 263 MAAAQPSFTGVAPGAGGASAPGSQTQQIFIPNSLVGA 299
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 114/207 (55%), Gaps = 28/207 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
++ IIG++G V ++RE+SG+++ IS+S PERI+ V G++D++ +AF LI + I
Sbjct: 97 QDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGALDAVSKAFGLIVRRI- 155
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
++ + S+ + ++ I+P S+ GS+IG+GGS+IK I++ SGA + + MLP
Sbjct: 156 ---NDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLP 212
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSP-----PKGATIPYRPLPQ----------- 165
STER +++ GV DA+ A+Y I I+++ P YR PQ
Sbjct: 213 GSTERILSVSGVADAIHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTG 272
Query: 166 ------NAGGPGLIGNQFGMQNSLMGA 186
A PG Q + NSL+GA
Sbjct: 273 VAPGAGGASAPGSQTQQIFIPNSLVGA 299
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-----EEEDSNDRTITMTGT 317
T+++ +PN L+GA+IGK G+KI EIR S IR+++ + + ++R +T+TG
Sbjct: 287 TQQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPDERLVTITGQ 346
Query: 318 PDAIALAQYLINMSVELLRANLNGEGGGE 346
P I +A ++ +E +A G GGG+
Sbjct: 347 PVNINIAVQMLYHRLEAEKAKAAGMGGGQ 375
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-----EEEDSNDRTITMTGT 762
T+++ +PN L+GA+IGK G+KI EIR S IR+++ + + ++R +T+TG
Sbjct: 287 TQQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPDERLVTITGQ 346
Query: 763 PDAIALAQYLINMSVELLRANLNGEGGGE 791
P I +A ++ +E +A G GGG+
Sbjct: 347 PVNINIAVQMLYHRLEAEKAKAAGMGGGQ 375
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
+Q I +R ++ IIG+ G+ + IRE SGA V + S+ +P + ER +N+ G DA
Sbjct: 85 AQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTI-SESIPGNPERILNVFGALDA 143
Query: 137 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
V++A I + D P A++P G + +F + NS MG+
Sbjct: 144 VSKAFGLIVRRINDEPFDVASVP---------GSRAVTIKFIIPNSRMGS 184
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
+Q I +R ++ IIG+ G+ + IRE SGA V + S+ +P + ER +N+ G DA
Sbjct: 85 AQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTI-SESIPGNPERILNVFGALDA 143
Query: 582 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 631
V++A I + D P A++P G + +F + NS MG+
Sbjct: 144 VSKAFGLIVRRINDEPFDVASVP---------GSRAVTIKFIIPNSRMGS 184
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIG+GG+KI EI+ SGA R++ S S +R ++++G DAI
Sbjct: 171 VTIKFIIPNSRMGSVIGRGGSKIKEIQDASGA--RLNASEVMLPGSTERILSVSGVADAI 228
Query: 322 ALAQYLI 328
+A Y I
Sbjct: 229 HIAVYYI 235
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G+VIG+GG+KI EI+ SGA R++ S S +R ++++G DAI
Sbjct: 171 VTIKFIIPNSRMGSVIGRGGSKIKEIQDASGA--RLNASEVMLPGSTERILSVSGVADAI 228
Query: 767 ALAQYLI 773
+A Y I
Sbjct: 229 HIAVYYI 235
>gi|401880798|gb|EJT45110.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 2479]
Length = 793
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 119/217 (54%), Gaps = 28/217 (12%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFR 496
Q MR ++ ++ IIG++G V ++RE+SG+++ IS+S PERI+ V G++D++ +
Sbjct: 87 QISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGALDAVSK 146
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF LI + I ++ + S+ + ++ I+P S+ GS+IG+GGS+IK I++ SGA
Sbjct: 147 AFGLIVRRI----NDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGA 202
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP-----PKGATIPYRPLPQ- 610
+ + MLP STER +++ GV DA+ A+Y I I+++ P YR PQ
Sbjct: 203 RLNASEVMLPGSTERILSVSGVADAIHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQG 262
Query: 611 ----------------NAGGPGLIGNQFGMQNSLMGA 631
A PG Q + NSL+GA
Sbjct: 263 MAAAQPSFTGVAPGAGGASAPGSQTQQIFIPNSLVGA 299
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 114/207 (55%), Gaps = 28/207 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
++ IIG++G V ++RE+SG+++ IS+S PERI+ V G++D++ +AF LI + I
Sbjct: 97 QDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGALDAVSKAFGLIVRRI- 155
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
++ + S+ + ++ I+P S+ GS+IG+GGS+IK I++ SGA + + MLP
Sbjct: 156 ---NDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLP 212
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSP-----PKGATIPYRPLPQ----------- 165
STER +++ GV DA+ A+Y I I+++ P YR PQ
Sbjct: 213 GSTERILSVSGVADAIHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTG 272
Query: 166 ------NAGGPGLIGNQFGMQNSLMGA 186
A PG Q + NSL+GA
Sbjct: 273 VAPGAGGASAPGSQTQQIFIPNSLVGA 299
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-----EEEDSNDRTITMTGT 317
T+++ +PN L+GA+IGK G+KI EIR S IR+++ + + ++R +T+TG
Sbjct: 287 TQQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPDERLVTITGQ 346
Query: 318 PDAIALAQYLINMSVELLRANLNGEGGGE 346
P I +A ++ +E +A G GGG+
Sbjct: 347 PVNINIAVQMLYHRLEAEKAKAAGMGGGQ 375
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-----EEEDSNDRTITMTGT 762
T+++ +PN L+GA+IGK G+KI EIR S IR+++ + + ++R +T+TG
Sbjct: 287 TQQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPDERLVTITGQ 346
Query: 763 PDAIALAQYLINMSVELLRANLNGEGGGE 791
P I +A ++ +E +A G GGG+
Sbjct: 347 PVNINIAVQMLYHRLEAEKAKAAGMGGGQ 375
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
+Q I +R ++ IIG+ G+ + IRE SGA V + S+ +P + ER +N+ G DA
Sbjct: 85 AQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTI-SESIPGNPERILNVFGALDA 143
Query: 137 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
V++A I + D P A++P G + +F + NS MG+
Sbjct: 144 VSKAFGLIVRRINDEPFDVASVP---------GSRAVTIKFIIPNSRMGS 184
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
+Q I +R ++ IIG+ G+ + IRE SGA V + S+ +P + ER +N+ G DA
Sbjct: 85 AQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTI-SESIPGNPERILNVFGALDA 143
Query: 582 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 631
V++A I + D P A++P G + +F + NS MG+
Sbjct: 144 VSKAFGLIVRRINDEPFDVASVP---------GSRAVTIKFIIPNSRMGS 184
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIG+GG+KI EI+ SGA R++ S S +R ++++G DAI
Sbjct: 171 VTIKFIIPNSRMGSVIGRGGSKIKEIQDASGA--RLNASEVMLPGSTERILSVSGVADAI 228
Query: 322 ALAQYLI 328
+A Y I
Sbjct: 229 HIAVYYI 235
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G+VIG+GG+KI EI+ SGA R++ S S +R ++++G DAI
Sbjct: 171 VTIKFIIPNSRMGSVIGRGGSKIKEIQDASGA--RLNASEVMLPGSTERILSVSGVADAI 228
Query: 767 ALAQYLI 773
+A Y I
Sbjct: 229 HIAVYYI 235
>gi|170578788|ref|XP_001894545.1| KH domain containing protein [Brugia malayi]
gi|158598797|gb|EDP36609.1| KH domain containing protein [Brugia malayi]
Length = 377
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 50/308 (16%)
Query: 28 IYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVP 87
+ + DS TPERI T++ +++++ + I +++ Q++ N + I+LR++V
Sbjct: 104 VTVPDSQTPERIATIVATVENVLAIVTEIIPKLDD-RTLQSRESDLN---RPIELRVLVH 159
Query: 88 ASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLI 147
+S G++IG+ GS+IK ++E G + V + P STER V+IKG PD + + I +
Sbjct: 160 SSHAGAVIGRQGSKIKEMKEELGVQMKVFAQCPPQSTERVVSIKGAPDKILACVNHIMNM 219
Query: 148 MVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSG 207
+ + P KG T PY + + G + + G M P+A + + G G S
Sbjct: 220 LKEIPIKGVTKPYESMFYDPSYSSEYGG-YPPDRNYRGP--MIRGPMA-VTSYGNYGRSF 275
Query: 208 GGMGGG---LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 264
GG L+A AL GP + T
Sbjct: 276 QRQIGGRGPLSAVALPPYM--------------------------GPEEST--------- 300
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++T+PNEL G +IGKGG +I +R+ SGA I + +++S +R IT+TGT AI A
Sbjct: 301 QVTIPNELGGTIIGKGGERINRVREESGAQIVVGP----QQESGERIITITGTSTAIQTA 356
Query: 325 QYLINMSV 332
QYL+ V
Sbjct: 357 QYLLQQCV 364
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 157/353 (44%), Gaps = 82/353 (23%)
Query: 460 ETVKKLREE--------------------------------SGSKIYISDSSTPERIVTV 487
E +K+LR E + + + DS TPERI T+
Sbjct: 59 ENIKRLRSEPLLPVTILISNPDARSPSSSPATPCCCWMVQYYDANVTVPDSQTPERIATI 118
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
+ +++++ + I +++ Q++ N + I+LR++V +S G++IG+ GS+I
Sbjct: 119 VATVENVLAIVTEIIPKLDD-RTLQSRESDLN---RPIELRVLVHSSHAGAVIGRQGSKI 174
Query: 548 KTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
K ++E G + V + P STER V+IKG PD + + I ++ + P KG T PY
Sbjct: 175 KEMKEELGVQMKVFAQCPPQSTERVVSIKGAPDKILACVNHIMNMLKEIPIKGVTKPYES 234
Query: 608 LPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG---LNAAAL 664
+ + G + + G M P+A + + G G S GG L+A AL
Sbjct: 235 MFYDPSYSSEYGG-YPPDRNYRGP--MIRGPMA-VTSYGNYGRSFQRQIGGRGPLSAVAL 290
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
GP + T ++T+PNEL G +IGK
Sbjct: 291 PPYM--------------------------GPEEST---------QVTIPNELGGTIIGK 315
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
GG +I +R+ SGA I + +++S +R IT+TGT AI AQYL+ V
Sbjct: 316 GGERINRVREESGAQIVVGP----QQESGERIITITGTSTAIQTAQYLLQQCV 364
>gi|321258532|ref|XP_003193987.1| telomere length regulating RNA binding protein; Pbp2p [Cryptococcus
gattii WM276]
gi|317460457|gb|ADV22200.1| Telomere length regulating RNA binding protein, putative; Pbp2p
[Cryptococcus gattii WM276]
Length = 357
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFR 496
Q MR ++ ++ IIG+ G V ++RE+S +++ +S+S PERI+ V G +D++ +
Sbjct: 79 QISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDAVAK 138
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF LI + I + + G S+ + ++ I+P S+ GS+IGKGGS+IK I+E SGA
Sbjct: 139 AFGLIVRRINDEPFDVPSVPG----SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGA 194
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYR 606
+ + MLP STER +++ GV DAV A+Y I I++ D P AT YR
Sbjct: 195 RLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTILLEYQDRYPANATGSYR 247
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 98/158 (62%), Gaps = 9/158 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIG+ G V ++RE+S +++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 94 IIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDAVAKAFGLIVRRINDEPFD 153
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ I+P S+ GS+IGKGGS+IK I+E SGA + + MLP STER
Sbjct: 154 VPSVPG----SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTER 209
Query: 127 EVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYR 161
+++ GV DAV A+Y I I++ D P AT YR
Sbjct: 210 VLSVSGVADAVHIAVYYIGTILLEYQDRYPANATGSYR 247
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE-----EEDSNDRTITMTGT 317
T+++ +PN L+GA+IG+GG+KI EIR S IR++ + +R +T+TG
Sbjct: 268 TQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGY 327
Query: 318 PDAIALAQYLINMSVELLRANLNGEGGG 345
PD I A L+ VE RA L + G
Sbjct: 328 PDNINAAVALLYSRVEAERAKLVEQNAG 355
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE-----EEDSNDRTITMTGT 762
T+++ +PN L+GA+IG+GG+KI EIR S IR++ + +R +T+TG
Sbjct: 268 TQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGY 327
Query: 763 PDAIALAQYLINMSVELLRANLNGEGGG 790
PD I A L+ VE RA L + G
Sbjct: 328 PDNINAAVALLYSRVEAERAKLVEQNAG 355
>gi|221114013|ref|XP_002155770.1| PREDICTED: poly(rC)-binding protein 3-like [Hydra magnipapillata]
Length = 313
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 101/174 (58%), Gaps = 7/174 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+ I+ ++ G IIGK G ++++R+ESG+ I +S S+ ERI+ + G+ + A ++
Sbjct: 8 LHFIILSQDAGGIIGKEGRNIRQMRDESGANINVSGSTGVERILNIKGTSSEVKSAVRMV 67
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+ ++E N N + LRL+VP SQCG +IGKGG +IK IRE SGA++ +
Sbjct: 68 AEKLQEILSGSN-----NEYVPPVTLRLLVPNSQCGPLIGKGGQRIKEIREASGATITIP 122
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP--LPQNAG 613
S+ LP S+ER V + G P+A+ I +I I + P + + Y P P++ G
Sbjct: 123 SETLPGSSERSVTLAGSPEALGLCIAKIWDIFEEFPARQNNVQYFPNMYPRSMG 176
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 98/167 (58%), Gaps = 7/167 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
++ G IIGK G ++++R+ESG+ I +S S+ ERI+ + G+ + A ++ + ++E
Sbjct: 15 QDAGGIIGKEGRNIRQMRDESGANINVSGSTGVERILNIKGTSSEVKSAVRMVAEKLQEI 74
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
N N + LRL+VP SQCG +IGKGG +IK IRE SGA++ + S+ LP S
Sbjct: 75 LSGSN-----NEYVPPVTLRLLVPNSQCGPLIGKGGQRIKEIREASGATITIPSETLPGS 129
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP--LPQNAG 168
+ER V + G P+A+ I +I I + P + + Y P P++ G
Sbjct: 130 SERSVTLAGSPEALGLCIAKIWDIFEEFPARQNNVQYFPNMYPRSMG 176
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 85/173 (49%), Gaps = 26/173 (15%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + G +IGK G+ +K++RE SG+ I I + P ER VT+ GS ++L
Sbjct: 88 LRLLVPNSQCGPLIGKGGQRIKEIREASGATITIPSETLPGSSERSVTLAGSPEALGLCI 147
Query: 499 SLITKNIEEFHKNQNK----------------------HLGGNGESQLIQLRLIVPASQC 536
+ I EEF QN L G S+ + ++ +P++
Sbjct: 148 AKIWDIFEEFPARQNNVQYFPNMYPRSMGPHQLSVMSGQLSFTGLSRRSEQKVRLPSNVI 207
Query: 537 GSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
GS+IGKGG I IR+ SGA+V+V N +V I G P+AV+ A + I
Sbjct: 208 GSLIGKGGCHINEIRQFSGATVHVEESKKDNRMS-DVIIAGTPEAVSCATFLI 259
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+ G +IGK G+ +K++RE SG+ I I + P ER VT+ GS ++L + I E
Sbjct: 96 QCGPLIGKGGQRIKEIREASGATITIPSETLPGSSERSVTLAGSPEALGLCIAKIWDIFE 155
Query: 62 EFHKNQNK----------------------HLGGNGESQLIQLRLIVPASQCGSIIGKGG 99
EF QN L G S+ + ++ +P++ GS+IGKGG
Sbjct: 156 EFPARQNNVQYFPNMYPRSMGPHQLSVMSGQLSFTGLSRRSEQKVRLPSNVIGSLIGKGG 215
Query: 100 SQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
I IR+ SGA+V+V N +V I G P+AV+ A + I
Sbjct: 216 CHINEIRQFSGATVHVEESKKDNRMS-DVIIAGTPEAVSCATFLI 259
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 29/270 (10%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
++L I+ + G IIGK G I+ +R+ SGA++ V+ ER +NIKG V
Sbjct: 6 LELHFIILSQDAGGIIGKEGRNIRQMRDESGANINVSGS---TGVERILNIKGTSSEVKS 62
Query: 140 AIYQICLIMVDSPPKGATIPYRP-------LPQNAGGPGLIGNQFGMQNSLMGAPDMGNN 192
A+ + + + G+ Y P +P + GP LIG + A +
Sbjct: 63 AVRMVAEKLQEIL-SGSNNEYVPPVTLRLLVPNSQCGP-LIGKGGQRIKEIREA----SG 116
Query: 193 PLAGLAALGLGGNSGGGMGGGLNAAALA-ALASSQLKTNHMPRNQNQNQNQHNRNNRD-G 250
+ + L G+S + + AL +A P QN Q N R G
Sbjct: 117 ATITIPSETLPGSSERSVTLAGSPEALGLCIAKIWDIFEEFPARQNNVQYFPNMYPRSMG 176
Query: 251 PSQKTNQQ--------QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 302
P Q + + +++ +P+ +IG++IGKGG I EIR+ SGA + + +S +
Sbjct: 177 PHQLSVMSGQLSFTGLSRRSEQKVRLPSNVIGSLIGKGGCHINEIRQFSGATVHVEESKK 236
Query: 303 EEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+ S+ + + GTP+A++ A +LIN +
Sbjct: 237 DNRMSD---VIIAGTPEAVSCATFLINARI 263
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 29/270 (10%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
++L I+ + G IIGK G I+ +R+ SGA++ V+ ER +NIKG V
Sbjct: 6 LELHFIILSQDAGGIIGKEGRNIRQMRDESGANINVSGS---TGVERILNIKGTSSEVKS 62
Query: 585 AIYQICLIMVDSPPKGATIPYRP-------LPQNAGGPGLIGNQFGMQNSLMGAPDMGNN 637
A+ + + + G+ Y P +P + GP LIG + A +
Sbjct: 63 AVRMVAEKLQEIL-SGSNNEYVPPVTLRLLVPNSQCGP-LIGKGGQRIKEIREA----SG 116
Query: 638 PLAGLAALGLGGNSGGGMGGGLNAAALA-ALASSQLKTNHMPRNQNQNQNQHNRNNRD-G 695
+ + L G+S + + AL +A P QN Q N R G
Sbjct: 117 ATITIPSETLPGSSERSVTLAGSPEALGLCIAKIWDIFEEFPARQNNVQYFPNMYPRSMG 176
Query: 696 PSQKTNQQ--------QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 747
P Q + + +++ +P+ +IG++IGKGG I EIR+ SGA + + +S +
Sbjct: 177 PHQLSVMSGQLSFTGLSRRSEQKVRLPSNVIGSLIGKGGCHINEIRQFSGATVHVEESKK 236
Query: 748 EEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+ S+ + + GTP+A++ A +LIN +
Sbjct: 237 DNRMSD---VIIAGTPEAVSCATFLINARI 263
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 163/372 (43%), Gaps = 81/372 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 67
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 68 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 127
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT--I 603
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P + I
Sbjct: 128 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNI 185
Query: 604 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPD-----------------MGNNPLAGLAAL- 645
Y N GP N G S +P +G LAG+ A
Sbjct: 186 SYA----NVAGPVANSNPTG---SPYASPADVLPAAAAASAAAASGLLGPAGLAGVGAFP 238
Query: 646 GLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQN 705
G GG L A LAA ++ +L
Sbjct: 239 AXXXXXAGAAGGFLTAEKLAAESAKEL--------------------------------- 265
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A
Sbjct: 266 ---VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAA 322
Query: 766 IALAQYLINMSV 777
AQYLI+ V
Sbjct: 323 TQAAQYLISQRV 334
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 159/362 (43%), Gaps = 81/362 (22%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 18 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 77
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 78 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 137
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT--IPYRPLPQNAG 168
++ P N ER V + G P+ V +A+ I + + P + I Y N
Sbjct: 138 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYA----NVA 191
Query: 169 GPGLIGNQFGMQNSLMGAPD-----------------MGNNPLAGLAAL-GLGGNSGGGM 210
GP N G S +P +G LAG+ A G
Sbjct: 192 GPVANSNPTG---SPYASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPAXXXXXAGAA 248
Query: 211 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 270
GG L A LAA ++ +L E+ VP
Sbjct: 249 GGFLTAEKLAAESAKEL------------------------------------VEIAVPE 272
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A AQYLI+
Sbjct: 273 NLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQ 332
Query: 331 SV 332
V
Sbjct: 333 RV 334
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 86/248 (34%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+ G++IGKGG I +++K +GA I++SK S D GT + + L
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK-------SKD---FYPGTTERVCLV 58
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP-LAAALPQLAQI 383
Q G E+ LNA + +A + ++ Q
Sbjct: 59 Q-----------------GTAEA-------------------LNAVHSFIAEKVREIPQA 82
Query: 384 LTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMR 443
+TKP +N L + + P+ A ++ +
Sbjct: 83 MTKPEVVNILQPQTTMN---------------------------PDRA--------KQAK 107
Query: 444 HIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGSMDSLFRAFS 499
I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G + + +A S
Sbjct: 108 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVS 167
Query: 500 LITKNIEE 507
I + ++E
Sbjct: 168 AIVQKVQE 175
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN- 66
Query: 140 AIYQICLIMVDSPPKGATIP 159
A++ V P+ T P
Sbjct: 67 AVHSFIAEKVREIPQAMTKP 86
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 110/248 (44%), Gaps = 27/248 (10%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ VPN G +IGKGG + + + SGA +++S+ E + +R +T++G P+ + A
Sbjct: 107 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-EGINLQERVVTVSGEPEQVHKA 165
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
I V+ E S+ + S N + P+A SNP + A +L
Sbjct: 166 VSAIVQKVQ--------EDPQSSSCLNISYAN---VAGPVAN---SNPTGSPYASPADVL 211
Query: 385 TKPGALNALTSLSALG--GLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRM 442
A +A + LG GL+ + G +G GG A + +
Sbjct: 212 PAAAAASAAAASGLLGPAGLAGV--GAFPAXXXXXAGAAGGFLTAEKLA---AESAKELV 266
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS-----STPERIVTVIGSMDSLFRA 497
+ VG+I+GK G+T+ + +E +G++I IS T R VT+ GS + A
Sbjct: 267 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 326
Query: 498 FSLITKNI 505
LI++ +
Sbjct: 327 QYLISQRV 334
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 16/191 (8%)
Query: 425 PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPE 482
P P ANI MR ++ ++ IIGK G V ++RE+SG+++ +S+S PE
Sbjct: 56 PAVPPSANIH-------MRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPE 108
Query: 483 RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
RI+ V G +D++ +AF LI + I + + G S+ + ++ ++P S+ GS+IGK
Sbjct: 109 RILNVSGPLDAVSKAFGLIVRRINDEPFDVPSVPG----SRAVTIKFMIPNSRMGSVIGK 164
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP---PK 599
GGS+IK I++ SGA + + MLP STER +++ GV DA+ A Y I I++++ P
Sbjct: 165 GGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIHIATYYIGTILIEAQERMPS 224
Query: 600 GATIPYRPLPQ 610
+ YRP Q
Sbjct: 225 TSNSTYRPSSQ 235
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 100/162 (61%), Gaps = 9/162 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 137
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGKGGS+IK I++ SGA + + MLP STER
Sbjct: 138 VPSVPG----SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTER 193
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRPLPQ 165
+++ GV DA+ A Y I I++++ P + YRP Q
Sbjct: 194 VLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPSSQ 235
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 136/312 (43%), Gaps = 59/312 (18%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSK 122
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAGLA 198
A I + D P ++P G + +F + NS MG+ G + + +
Sbjct: 123 AFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQ 173
Query: 199 -ALGLGGNSGGGMGGG-----LNAAALA---ALASSQLKT------NHMPRNQNQNQNQH 243
A G N+ GM G L+ A +A +A+ + T MP N
Sbjct: 174 DASGAKLNASEGMLPGSTERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPS 233
Query: 244 NRNNRD------------------GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 285
++ R GP QQ T+++ +PN+L+G +IGKGG+KI
Sbjct: 234 SQPRRPTQGGGSSYVPGYSHHAPYGPPHNPPQQLQ--TQQIYIPNDLVGCIIGKGGSKIN 291
Query: 286 EIRKISGAMIRISKSSEEEEDSN--------DRTITMTGTPDAIALAQYLINMSVE---- 333
EIR +S + I+I + N +R + +TG P I +A L+ +E
Sbjct: 292 EIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVITGQPANIQMAVQLLYHRLEQEKQ 351
Query: 334 -LLRANLNGEGG 344
LRA G G
Sbjct: 352 KQLRAQQGGSSG 363
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 136/312 (43%), Gaps = 59/312 (18%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSK 122
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAGLA 643
A I + D P ++P G + +F + NS MG+ G + + +
Sbjct: 123 AFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQ 173
Query: 644 -ALGLGGNSGGGMGGG-----LNAAALA---ALASSQLKT------NHMPRNQNQNQNQH 688
A G N+ GM G L+ A +A +A+ + T MP N
Sbjct: 174 DASGAKLNASEGMLPGSTERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPS 233
Query: 689 NRNNRD------------------GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
++ R GP QQ T+++ +PN+L+G +IGKGG+KI
Sbjct: 234 SQPRRPTQGGGSSYVPGYSHHAPYGPPHNPPQQLQ--TQQIYIPNDLVGCIIGKGGSKIN 291
Query: 731 EIRKISGAMIRISKSSEEEEDSN--------DRTITMTGTPDAIALAQYLINMSVE---- 778
EIR +S + I+I + N +R + +TG P I +A L+ +E
Sbjct: 292 EIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVITGQPANIQMAVQLLYHRLEQEKQ 351
Query: 779 -LLRANLNGEGG 789
LRA G G
Sbjct: 352 KQLRAQQGGSSG 363
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 104/265 (39%), Gaps = 72/265 (27%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIGKGG+KI EI+ SGA +++ S S +R +++ G DAI
Sbjct: 147 VTIKFMIPNSRMGSVIGKGGSKIKEIQDASGA--KLNASEGMLPGSTERVLSVAGVADAI 204
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
+A Y I L+ A + M S+ PSS P
Sbjct: 205 HIATYYIG--TILIEA--------QERMPSTSNSTYRPSSQP------------------ 236
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFG-GVPQGPNYANIQTTGVQR 440
+P + GGGS G+ P GP + Q Q+
Sbjct: 237 ---RRP----------------------TQGGGSSYVPGYSHHAPYGPPHNPPQQLQTQQ 271
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS-------------STPERIVTV 487
+ VG IIGK G + ++R S S+I I + S ER+V +
Sbjct: 272 IY---IPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVI 328
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQ 512
G ++ A L+ +E+ + Q
Sbjct: 329 TGQPANIQMAVQLLYHRLEQEKQKQ 353
>gi|388579892|gb|EIM20211.1| hypothetical protein WALSEDRAFT_33458 [Wallemia sebi CBS 633.66]
Length = 349
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ ++ IIGK G+ + K+RE SG K+ +S S + PER++T G +D++ +AF
Sbjct: 40 VRSLIDTRDASIIIGKGGQNIAKIRETSGIKLVVSGSIPNNPERLLTATGQLDAVSKAFG 99
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
L+ + I + NQ G S+ + L+ +P + G IIG+ G++IK I+E SGA +
Sbjct: 100 LVVRTINDEDFNQPSLPG----SKAVTLKFAIPNMKMGFIIGRAGAKIKEIQEASGAKIS 155
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ +LPNSTER ++I GV DAV AIY + +I+ D
Sbjct: 156 TSDYVLPNSTERVLSIDGVADAVHIAIYHVGMILAD 191
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
++ IIGK G+ + K+RE SG K+ +S S + PER++T G +D++ +AF L+ + I
Sbjct: 47 RDASIIIGKGGQNIAKIRETSGIKLVVSGSIPNNPERLLTATGQLDAVSKAFGLVVRTIN 106
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ NQ G S+ + L+ +P + G IIG+ G++IK I+E SGA + + +LP
Sbjct: 107 DEDFNQPSLPG----SKAVTLKFAIPNMKMGFIIGRAGAKIKEIQEASGAKISTSDYVLP 162
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVD 150
NSTER ++I GV DAV AIY + +I+ D
Sbjct: 163 NSTERVLSIDGVADAVHIAIYHVGMILAD 191
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G +IG+ G KI EI++ SGA +IS S +S +R +++ G DA+
Sbjct: 121 VTLKFAIPNMKMGFIIGRAGAKIKEIQEASGA--KISTSDYVLPNSTERVLSIDGVADAV 178
Query: 322 ALAQYLINM 330
+A Y + M
Sbjct: 179 HIAIYHVGM 187
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G +IG+ G KI EI++ SGA +IS S +S +R +++ G DA+
Sbjct: 121 VTLKFAIPNMKMGFIIGRAGAKIKEIQEASGA--KISTSDYVLPNSTERVLSIDGVADAV 178
Query: 767 ALAQYLINM 775
+A Y + M
Sbjct: 179 HIAIYHVGM 187
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED---SNDRTITMTGTPD 319
++++ VPN L+G +IGKGG+KI +IR S I+I + E E+ S +R + ++G
Sbjct: 267 SQKIYVPNNLVGGLIGKGGSKINQIRYTSQCSIKILEPGEGEQTEGPSIERLVLISGPAS 326
Query: 320 AIALAQYLINMSVEL 334
I +A INM E+
Sbjct: 327 GIQIA---INMLSEV 338
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED---SNDRTITMTGTPD 764
++++ VPN L+G +IGKGG+KI +IR S I+I + E E+ S +R + ++G
Sbjct: 267 SQKIYVPNNLVGGLIGKGGSKINQIRYTSQCSIKILEPGEGEQTEGPSIERLVLISGPAS 326
Query: 765 AIALAQYLINMSVEL 779
I +A INM E+
Sbjct: 327 GIQIA---INMLSEV 338
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+ +R ++ IIGKGG I IRETSG + V S +PN+ ER + G DAV+
Sbjct: 37 YLTVRSLIDTRDASIIIGKGGQNIAKIRETSGIKL-VVSGSIPNNPERLLTATGQLDAVS 95
Query: 139 QAI 141
+A
Sbjct: 96 KAF 98
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+ +R ++ IIGKGG I IRETSG + V S +PN+ ER + G DAV+
Sbjct: 37 YLTVRSLIDTRDASIIIGKGGQNIAKIRETSGIKL-VVSGSIPNNPERLLTATGQLDAVS 95
Query: 584 QAI 586
+A
Sbjct: 96 KAF 98
>gi|358055492|dbj|GAA98612.1| hypothetical protein E5Q_05299 [Mixia osmundae IAM 14324]
Length = 549
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 7/169 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ ++ IIGK G+++K++RE++G K+ +S+S + PERI+ V G +D + +AF
Sbjct: 190 LRALIVTQDASIIIGKGGQSIKEIREKAGVKVLVSESIPNNPERILNVSGLLDGVSKAFG 249
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + I + + G S+ + +R IVP + GSIIGK G++IK I++ SGA +
Sbjct: 250 LIVRRINDEPFDVPSVPG----SRAVTIRFIVPNHRMGSIIGKQGAKIKEIQDASGARLQ 305
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 607
MLP STER ++I GV DA+ A+Y I+ + + PYRP
Sbjct: 306 ATESMLPGSTERILSISGVADAIHIAVYYTGAILAEHSDRAVNNTPYRP 354
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 96/157 (61%), Gaps = 7/157 (4%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G+++K++RE++G K+ +S+S + PERI+ V G +D + +AF LI + I + +
Sbjct: 202 IIGKGGQSIKEIREKAGVKVLVSESIPNNPERILNVSGLLDGVSKAFGLIVRRINDEPFD 261
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + +R IVP + GSIIGK G++IK I++ SGA + MLP STER
Sbjct: 262 VPSVPG----SRAVTIRFIVPNHRMGSIIGKQGAKIKEIQDASGARLQATESMLPGSTER 317
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
++I GV DA+ A+Y I+ + + PYRP
Sbjct: 318 ILSISGVADAIHIAVYYTGAILAEHSDRAVNNTPYRP 354
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN-DRTITMTGTPDAI 321
T+++ +PNEL+G +IGKGG KI E+R SGA I+I + SE + N +R + ++G P I
Sbjct: 464 TQQVYIPNELVGPIIGKGGLKINELRNNSGAHIKIMEPSEGGLNPNGERLVNVSGQPANI 523
Query: 322 ALAQYLINMSVELLRANLNGEG 343
+A ++ +E +AN +G
Sbjct: 524 QMAVQMLYQRLEQEKANKMNQG 545
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN-DRTITMTGTPDAI 766
T+++ +PNEL+G +IGKGG KI E+R SGA I+I + SE + N +R + ++G P I
Sbjct: 464 TQQVYIPNELVGPIIGKGGLKINELRNNSGAHIKIMEPSEGGLNPNGERLVNVSGQPANI 523
Query: 767 ALAQYLINMSVELLRANLNGEG 788
+A ++ +E +AN +G
Sbjct: 524 QMAVQMLYQRLEQEKANKMNQG 545
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR ++ IIGKGG IK IRE +G V V S+ +PN+ ER +N+ G+ D V++
Sbjct: 188 VTLRALIVTQDASIIIGKGGQSIKEIREKAGVKVLV-SESIPNNPERILNVSGLLDGVSK 246
Query: 140 AIYQICLIMVDSPPKGATIP 159
A I + D P ++P
Sbjct: 247 AFGLIVRRINDEPFDVPSVP 266
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T VPN +G++IGK G KI EI+ SGA R+ + S +R ++++G DAI
Sbjct: 271 VTIRFIVPNHRMGSIIGKQGAKIKEIQDASGA--RLQATESMLPGSTERILSISGVADAI 328
Query: 322 ALAQYL 327
+A Y
Sbjct: 329 HIAVYY 334
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T VPN +G++IGK G KI EI+ SGA R+ + S +R ++++G DAI
Sbjct: 271 VTIRFIVPNHRMGSIIGKQGAKIKEIQDASGA--RLQATESMLPGSTERILSISGVADAI 328
Query: 767 ALAQYL 772
+A Y
Sbjct: 329 HIAVYY 334
>gi|443926268|gb|ELU44971.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 389
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFR 496
Q MR ++ ++ IIGK+G+ V ++RE+SG+++ +S+S PERI+ V G +D++ +
Sbjct: 68 QIHMRCLIVTQDASIIIGKAGKHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSK 127
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
+F LI + I + + G S+ + ++ I+P S+ GS+IG+GGS+IK I++ SGA
Sbjct: 128 SFGLIVRRINDEPFDTPSVPG----SRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGA 183
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS----PPKGATIPYRPLPQNA 612
+ + MLP STER +++ GV DA+ A Y + I++++ P +T YRP ++
Sbjct: 184 KLNASEGMLPGSTERILSVSGVADAIHIATYYVGNILIEAAERQPHSSSTSTYRPSGTSS 243
Query: 613 GGP 615
GP
Sbjct: 244 RGP 246
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 106/168 (63%), Gaps = 10/168 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK+G+ V ++RE+SG+++ +S+S PERI+ V G +D++ ++F LI + I + +
Sbjct: 83 IIGKAGKHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKSFGLIVRRINDEPFD 142
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ I+P S+ GS+IG+GGS+IK I++ SGA + + MLP STER
Sbjct: 143 TPSVPG----SRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKLNASEGMLPGSTER 198
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDS----PPKGATIPYRPLPQNAGGP 170
+++ GV DA+ A Y + I++++ P +T YRP ++ GP
Sbjct: 199 ILSVSGVADAIHIATYYVGNILIEAAERQPHSSSTSTYRPSGTSSRGP 246
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE------EEDSNDRTITMTG 316
T+++ +PN+L+G +IGKGG+KI EIR +S + IRI + + + + N+R + +TG
Sbjct: 276 TQQIYIPNDLVGCIIGKGGSKINEIRSLSASQIRIMEPGVQGPPGTAQGNPNERLVIITG 335
Query: 317 TPDAIALAQYLI 328
P I +A L+
Sbjct: 336 QPQNIQMAVNLL 347
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE------EEDSNDRTITMTG 761
T+++ +PN+L+G +IGKGG+KI EIR +S + IRI + + + + N+R + +TG
Sbjct: 276 TQQIYIPNDLVGCIIGKGGSKINEIRSLSASQIRIMEPGVQGPPGTAQGNPNERLVIITG 335
Query: 762 TPDAIALAQYLI 773
P I +A L+
Sbjct: 336 QPQNIQMAVNLL 347
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGK G + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 69 IHMRCLIVTQDASIIIGKAGKHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSK 127
Query: 140 AIYQICLIMVDSPPKGATIP 159
+ I + D P ++P
Sbjct: 128 SFGLIVRRINDEPFDTPSVP 147
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +P+ +G+VIG+GG+KI EI+ SGA +++ S S +R ++++G DAI
Sbjct: 152 VTIKFIIPHSRMGSVIGRGGSKIKEIQDASGA--KLNASEGMLPGSTERILSVSGVADAI 209
Query: 322 ALAQYLI-NMSVE 333
+A Y + N+ +E
Sbjct: 210 HIATYYVGNILIE 222
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +P+ +G+VIG+GG+KI EI+ SGA +++ S S +R ++++G DAI
Sbjct: 152 VTIKFIIPHSRMGSVIGRGGSKIKEIQDASGA--KLNASEGMLPGSTERILSVSGVADAI 209
Query: 767 ALAQYLI-NMSVE 778
+A Y + N+ +E
Sbjct: 210 HIATYYVGNILIE 222
>gi|313224203|emb|CBY43618.1| unnamed protein product [Oikopleura dioica]
Length = 331
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 159/351 (45%), Gaps = 59/351 (16%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVI 488
+Y++I T +R +M K+ IIG++ +K LRE++ I +S +R++T+
Sbjct: 2 DYSDIDLT-----LRFLMNQKQASQIIGRNASNIKNLREQTECNITLSSREHEKRLLTIA 56
Query: 489 GSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
+ S + E + +N G + + I L L++P + CG IIGKGG +K
Sbjct: 57 AKKSISMKTVS----RLGEILEAENNEYGKSTKLVPITLTLVIPKNICGMIIGKGGEALK 112
Query: 549 TIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
+R SGA + +++D LP S ER I G +VTQAI + IM+ + +
Sbjct: 113 DLRVKSGAQINMSADCLPKSDERTCQITGNNISVTQAIDLLIGIMIKA----------AI 162
Query: 609 PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALA 668
++ G + P A + A N+ G L +A
Sbjct: 163 DESKG-------------------EFKGTPSAEIRAYD-PKNAEEPAGRSEKDDKLMQMA 202
Query: 669 SSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTK 728
++ + N M N P + +Q Q E+ VPN+ +GA+IGKGG +
Sbjct: 203 TAFMTANQMI----------NPTLEYSPIEINDQLQ-----ELRVPNQHMGAIIGKGGKR 247
Query: 729 IFEIRKISGAMIRISKSSEEEEDSND--RTITMTGTPDAIALAQYLINMSV 777
I EIR +SG I + +S + DS R +T+ GT I +A YL+N ++
Sbjct: 248 IGEIRMMSGCNIHVERS---DADSKYGMRRLTLKGTKQQITMAAYLVNQTI 295
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 54/334 (16%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M K+ IIG++ +K LRE++ I +S +R++T+ + S +
Sbjct: 14 MNQKQASQIIGRNASNIKNLREQTECNITLSSREHEKRLLTIAAKKSISMKTVS----RL 69
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + +N G + + I L L++P + CG IIGKGG +K +R SGA + +++D L
Sbjct: 70 GEILEAENNEYGKSTKLVPITLTLVIPKNICGMIIGKGGEALKDLRVKSGAQINMSADCL 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
P S ER I G +VTQAI + IM+ + + ++ G
Sbjct: 130 PKSDERTCQITGNNISVTQAIDLLIGIMIKA----------AIDESKG------------ 167
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
+ P A + A N+ G L +A++ + N M
Sbjct: 168 -------EFKGTPSAEIRAYD-PKNAEEPAGRSEKDDKLMQMATAFMTANQMI------- 212
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
N P + +Q Q E+ VPN+ +GA+IGKGG +I EIR +SG I + +S
Sbjct: 213 ---NPTLEYSPIEINDQLQ-----ELRVPNQHMGAIIGKGGKRIGEIRMMSGCNIHVERS 264
Query: 301 SEEEEDSND--RTITMTGTPDAIALAQYLINMSV 332
+ DS R +T+ GT I +A YL+N ++
Sbjct: 265 ---DADSKYGMRRLTLKGTKQQITMAAYLVNQTI 295
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 106/175 (60%), Gaps = 9/175 (5%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 65 HMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAF 124
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I + + G S+ + ++ ++P S+ GS+IGKGGS+IK I++ SGA +
Sbjct: 125 GLIVRRINDEPFDVPSVPG----SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKL 180
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRPLPQ 610
+ MLP STER +++ GV DA+ A Y I I++++ P + YRP Q
Sbjct: 181 NASEGMLPGSTERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPSSQ 235
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 100/162 (61%), Gaps = 9/162 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 137
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGKGGS+IK I++ SGA + + MLP STER
Sbjct: 138 VPSVPG----SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTER 193
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRPLPQ 165
+++ GV DA+ A Y I I++++ P + YRP Q
Sbjct: 194 VLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPSSQ 235
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 136/312 (43%), Gaps = 59/312 (18%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSK 122
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAGLA 198
A I + D P ++P G + +F + NS MG+ G + + +
Sbjct: 123 AFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQ 173
Query: 199 -ALGLGGNSGGGMGGG-----LNAAALA---ALASSQLKT------NHMPRNQNQNQNQH 243
A G N+ GM G L+ A +A +A+ + T MP N
Sbjct: 174 DASGAKLNASEGMLPGSTERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPS 233
Query: 244 NRNNRD------------------GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 285
++ R GP QQ T+++ +PN+L+G +IGKGG+KI
Sbjct: 234 SQPRRPTQGGGSSYVPGYSHHAPYGPPHNPPQQLQ--TQQIYIPNDLVGCIIGKGGSKIN 291
Query: 286 EIRKISGAMIRISKSSEEEEDSN--------DRTITMTGTPDAIALAQYLINMSVE---- 333
EIR +S + I+I + N +R + +TG P I +A L+ +E
Sbjct: 292 EIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVITGQPANIQMAVQLLYHRLEQEKQ 351
Query: 334 -LLRANLNGEGG 344
LRA G G
Sbjct: 352 KQLRAQQGGSSG 363
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 136/312 (43%), Gaps = 59/312 (18%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSK 122
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAGLA 643
A I + D P ++P G + +F + NS MG+ G + + +
Sbjct: 123 AFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQ 173
Query: 644 -ALGLGGNSGGGMGGG-----LNAAALA---ALASSQLKT------NHMPRNQNQNQNQH 688
A G N+ GM G L+ A +A +A+ + T MP N
Sbjct: 174 DASGAKLNASEGMLPGSTERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPS 233
Query: 689 NRNNRD------------------GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
++ R GP QQ T+++ +PN+L+G +IGKGG+KI
Sbjct: 234 SQPRRPTQGGGSSYVPGYSHHAPYGPPHNPPQQLQ--TQQIYIPNDLVGCIIGKGGSKIN 291
Query: 731 EIRKISGAMIRISKSSEEEEDSN--------DRTITMTGTPDAIALAQYLINMSVE---- 778
EIR +S + I+I + N +R + +TG P I +A L+ +E
Sbjct: 292 EIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVITGQPANIQMAVQLLYHRLEQEKQ 351
Query: 779 -LLRANLNGEGG 789
LRA G G
Sbjct: 352 KQLRAQQGGSSG 363
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 104/265 (39%), Gaps = 72/265 (27%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIGKGG+KI EI+ SGA +++ S S +R +++ G DAI
Sbjct: 147 VTIKFMIPNSRMGSVIGKGGSKIKEIQDASGA--KLNASEGMLPGSTERVLSVAGVADAI 204
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
+A Y I L+ A + M S+ PSS P
Sbjct: 205 HIATYYIG--TILIEA--------QERMPSTSNSTYRPSSQP------------------ 236
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFG-GVPQGPNYANIQTTGVQR 440
+P + GGGS G+ P GP + Q Q+
Sbjct: 237 ---RRP----------------------TQGGGSSYVPGYSHHAPYGPPHNPPQQLQTQQ 271
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS-------------STPERIVTV 487
+ VG IIGK G + ++R S S+I I + S ER+V +
Sbjct: 272 IY---IPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVI 328
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQ 512
G ++ A L+ +E+ + Q
Sbjct: 329 TGQPANIQMAVQLLYHRLEQEKQKQ 353
>gi|402225510|gb|EJU05571.1| hypothetical protein DACRYDRAFT_20011 [Dacryopinax sp. DJM-731 SS1]
Length = 413
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 100/160 (62%), Gaps = 6/160 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK G V ++RE+SG++I +S+S PERI+ V G +D++ +AF
Sbjct: 123 HMRALIVTQDASIIIGKGGSHVNEIREKSGARITVSESIPGNPERILNVTGPLDAVAKAF 182
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I + Q G S+ + ++ I+P S+ G++IGK GS+IK I+E SGA +
Sbjct: 183 GLIVRQINDEPFEQPSVPG----SRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKL 238
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
+ + +LP STER +N+ GV DA+ A Y + +++S P
Sbjct: 239 HASEGLLPGSTERVLNVSGVADAIHIATYYVGNSLLNSHP 278
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 94/147 (63%), Gaps = 6/147 (4%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+SG++I +S+S PERI+ V G +D++ +AF LI + I +
Sbjct: 136 IIGKGGSHVNEIREKSGARITVSESIPGNPERILNVTGPLDAVAKAFGLIVRQINDEPFE 195
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
Q G S+ + ++ I+P S+ G++IGK GS+IK I+E SGA ++ + +LP STER
Sbjct: 196 QPSVPG----SRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGLLPGSTER 251
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPP 153
+N+ GV DA+ A Y + +++S P
Sbjct: 252 VLNVSGVADAIHIATYYVGNSLLNSHP 278
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
Q I +R ++ IIGKGGS + IRE SGA + V S+ +P + ER +N+ G DAV
Sbjct: 120 QNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITV-SESIPGNPERILNVTGPLDAV 178
Query: 138 TQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMG 185
+A I + D P + ++P G + +F + NS MG
Sbjct: 179 AKAFGLIVRQINDEPFEQPSVP---------GSRAVTIKFIIPNSRMG 217
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
Q I +R ++ IIGKGGS + IRE SGA + V S+ +P + ER +N+ G DAV
Sbjct: 120 QNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITV-SESIPGNPERILNVTGPLDAV 178
Query: 583 TQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMG 630
+A I + D P + ++P G + +F + NS MG
Sbjct: 179 AKAFGLIVRQINDEPFEQPSVP---------GSRAVTIKFIIPNSRMG 217
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE---------EEEDSNDRT 311
Q T+ +PN+L+G++IGKGG KI EIR +SG I+I + + + +R
Sbjct: 324 QQTQNFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQPMSETERM 383
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGE 342
+T+TG +A I M+V+LL + + E
Sbjct: 384 VTITG-----GIAN--IQMAVQLLASRIEQE 407
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE---------EEEDSNDRT 756
Q T+ +PN+L+G++IGKGG KI EIR +SG I+I + + + +R
Sbjct: 324 QQTQNFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQPMSETERM 383
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNGE 787
+T+TG +A I M+V+LL + + E
Sbjct: 384 VTITG-----GIAN--IQMAVQLLASRIEQE 407
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G +IGK G+KI EI++ SGA + S+ S +R + ++G DAI
Sbjct: 205 VTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGL--LPGSTERVLNVSGVADAI 262
Query: 322 ALAQYLI 328
+A Y +
Sbjct: 263 HIATYYV 269
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G +IGK G+KI EI++ SGA + S+ S +R + ++G DAI
Sbjct: 205 VTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGL--LPGSTERVLNVSGVADAI 262
Query: 767 ALAQYLI 773
+A Y +
Sbjct: 263 HIATYYV 269
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 34/187 (18%)
Query: 164 PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALG-----LGGNSGGGMGGGLNAAA 218
P +AG P ++ +N + D + P+ LA + L ++ G L +
Sbjct: 11 PSDAGSPSGHTSKRANRNEVNPEDDTYHEPIDSLAQIPADQPMLDADTPAAADGSLTPTS 70
Query: 219 LAALASSQLK-----------------TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ 261
LA S ++ T+ P +N+ R+ P Q + +
Sbjct: 71 LAPADSVSVQPSNSSPGAVQATITAPPTDATPTADKDEENEDG--TREPPPQNIHMRALI 128
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T++ ++ +IGKGG+ + EIR+ SGA I +S+S + +R + +TG DA+
Sbjct: 129 VTQDASI-------IIGKGGSHVNEIREKSGARITVSESI---PGNPERILNVTGPLDAV 178
Query: 322 ALAQYLI 328
A A LI
Sbjct: 179 AKAFGLI 185
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 34/187 (18%)
Query: 609 PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALG-----LGGNSGGGMGGGLNAAA 663
P +AG P ++ +N + D + P+ LA + L ++ G L +
Sbjct: 11 PSDAGSPSGHTSKRANRNEVNPEDDTYHEPIDSLAQIPADQPMLDADTPAAADGSLTPTS 70
Query: 664 LAALASSQLK-----------------TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ 706
LA S ++ T+ P +N+ R+ P Q + +
Sbjct: 71 LAPADSVSVQPSNSSPGAVQATITAPPTDATPTADKDEENEDG--TREPPPQNIHMRALI 128
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T++ ++ +IGKGG+ + EIR+ SGA I +S+S + +R + +TG DA+
Sbjct: 129 VTQDASI-------IIGKGGSHVNEIREKSGARITVSESI---PGNPERILNVTGPLDAV 178
Query: 767 ALAQYLI 773
A A LI
Sbjct: 179 AKAFGLI 185
>gi|58259741|ref|XP_567283.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134116752|ref|XP_773048.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229333|gb|AAW45766.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFR 496
Q MR ++ ++ IIG+ G V ++RE+S +++ +S+S PERI+ V G +D++ +
Sbjct: 79 QISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDAVAK 138
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF LI + I + + G S+ + ++ I+P S+ GS+IGKGGS+IK I+E SGA
Sbjct: 139 AFGLIVRRINDEPFDVPSVPG----SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGA 194
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYR 606
+ + MLP STER +++ GV DAV A+Y I I++ D P AT Y+
Sbjct: 195 RLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTILLEYQDRYPSNATGSYK 247
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 98/158 (62%), Gaps = 9/158 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIG+ G V ++RE+S +++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 94 IIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDAVAKAFGLIVRRINDEPFD 153
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ I+P S+ GS+IGKGGS+IK I+E SGA + + MLP STER
Sbjct: 154 VPSVPG----SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTER 209
Query: 127 EVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYR 161
+++ GV DAV A+Y I I++ D P AT Y+
Sbjct: 210 VLSVSGVADAVHIAVYYIGTILLEYQDRYPSNATGSYK 247
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 30/288 (10%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
Q I +R ++ IIG+GG+ + IRE S A V V S+ +P + ER +N+ G DAV
Sbjct: 78 QQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTV-SESIPGNPERILNVSGPLDAV 136
Query: 138 TQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAG 196
+A I + D P ++P G + +F + NS MG+ G + +
Sbjct: 137 AKAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFIIPNSRMGSVIGKGGSKIKE 187
Query: 197 L-AALGLGGNSGGGM-----------GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHN 244
+ A G N+ M G +A +A + + R + +
Sbjct: 188 IQEASGARLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTILLEYQDRYPSNATGSYK 247
Query: 245 RNNRDGPSQKTNQQQN--QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 302
++ GP +N T+++ +PN L+GA+IG+GG+KI EIR S IR++
Sbjct: 248 QSQSRGPPPNSNAPPPPGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGT 307
Query: 303 E-----EEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ +R +T+TG PD I A L+ VE RA L + G
Sbjct: 308 TVPGGAAANPEERLVTITGYPDNINAAVALLYSRVEAERAKLVEQNAG 355
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 30/288 (10%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
Q I +R ++ IIG+GG+ + IRE S A V V S+ +P + ER +N+ G DAV
Sbjct: 78 QQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTV-SESIPGNPERILNVSGPLDAV 136
Query: 583 TQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAG 641
+A I + D P ++P G + +F + NS MG+ G + +
Sbjct: 137 AKAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFIIPNSRMGSVIGKGGSKIKE 187
Query: 642 L-AALGLGGNSGGGM-----------GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHN 689
+ A G N+ M G +A +A + + R + +
Sbjct: 188 IQEASGARLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTILLEYQDRYPSNATGSYK 247
Query: 690 RNNRDGPSQKTNQQQN--QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 747
++ GP +N T+++ +PN L+GA+IG+GG+KI EIR S IR++
Sbjct: 248 QSQSRGPPPNSNAPPPPGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGT 307
Query: 748 E-----EEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ +R +T+TG PD I A L+ VE RA L + G
Sbjct: 308 TVPGGAAANPEERLVTITGYPDNINAAVALLYSRVEAERAKLVEQNAG 355
>gi|385305943|gb|EIF49885.1| kh domain rna binding protein [Dekkera bruxellensis AWRI1499]
Length = 541
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 173/392 (44%), Gaps = 88/392 (22%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
R + E +++GK GET+KK++E S ++I +SD+ PER+++V G + + +AF
Sbjct: 157 HFRMLCTISEAATVVGKGGETIKKIKELSNARINVSDNLKGVPERVISVRGPAEYVAKAF 216
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + ++ + ESQ LRL+ P + G IIGK GS+ + I E+S A++
Sbjct: 217 GLIVR----MQLGEPLNVPSSLESQQYNLRLLFPHTIMGYIIGKKGSRFREIEESSAAAL 272
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP--- 615
+LP ST+R +NI GV DA+ A Y I +++ + + Y P N P
Sbjct: 273 KANDQILPASTDRVLNINGVADAIHIATYYIAQTVIEHKQQMSKAIYYN-PANFAQPTIP 331
Query: 616 -------------------GLIGNQFGMQ---NSLMGAPDM---------------GNNP 638
G +G QFG Q +MG P G +P
Sbjct: 332 LVNSSARRFQHRMMGDFRGGRMGRQFGPQPGFGPMMGMPSQMMGMYGQMSPQGNANGQSP 391
Query: 639 LAGLAALGLGGNSGGG---MGG--------GLNAAALAALASSQLKTNHMPRNQNQNQNQ 687
+G +G GG MGG N AA+A+ ++ T
Sbjct: 392 ESGDGQSNMGRIPGGKPPQMGGYFPPQYAPQFNPAAVASNTRAETVTT------------ 439
Query: 688 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 747
G K NQ ++ VP + IG +IG+GG + +IR+ +G ++I ++
Sbjct: 440 -------GADGKLNQ-------DIFVPQKHIGLIIGRGGRNLKDIRQQTGCYVKI---ND 482
Query: 748 EEEDSNDRTIT-MTGTPDAIALAQYLINMSVE 778
E S +R +T M+ I A LIN +E
Sbjct: 483 EVPGSTERKLTLMSNNMYGIQNALLLINNKIE 514
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 171/383 (44%), Gaps = 88/383 (22%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +++GK GET+KK++E S ++I +SD+ PER+++V G + + +AF LI +
Sbjct: 166 EAATVVGKGGETIKKIKELSNARINVSDNLKGVPERVISVRGPAEYVAKAFGLIVR---- 221
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+ ++ + ESQ LRL+ P + G IIGK GS+ + I E+S A++ +LP
Sbjct: 222 MQLGEPLNVPSSLESQQYNLRLLFPHTIMGYIIGKKGSRFREIEESSAAALKANDQILPA 281
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP------------ 170
ST+R +NI GV DA+ A Y I +++ + + Y P N P
Sbjct: 282 STDRVLNINGVADAIHIATYYIAQTVIEHKQQMSKAIYYN-PANFAQPTIPLVNSSARRF 340
Query: 171 ----------GLIGNQFGMQ---NSLMGAPDM---------------GNNPLAGLAALGL 202
G +G QFG Q +MG P G +P +G +
Sbjct: 341 QHRMMGDFRGGRMGRQFGPQPGFGPMMGMPSQMMGMYGQMSPQGNANGQSPESGDGQSNM 400
Query: 203 GGNSGGG---MGG--------GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP 251
G GG MGG N AA+A+ ++ T G
Sbjct: 401 GRIPGGKPPQMGGYFPPQYAPQFNPAAVASNTRAETVTT-------------------GA 441
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
K NQ ++ VP + IG +IG+GG + +IR+ +G ++I ++E S +R
Sbjct: 442 DGKLNQ-------DIFVPQKHIGLIIGRGGRNLKDIRQQTGCYVKI---NDEVPGSTERK 491
Query: 312 IT-MTGTPDAIALAQYLINMSVE 333
+T M+ I A LIN +E
Sbjct: 492 LTLMSNNMYGIQNALLLINNKIE 514
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+ R++ S+ +++GKGG IK I+E S A + V SD L ER ++++G + V
Sbjct: 155 YVHFRMLCTISEAATVVGKGGETIKKIKELSNARINV-SDNLKGVPERVISVRGPAEYVA 213
Query: 139 QAIYQICLIMVDSP 152
+A I + + P
Sbjct: 214 KAFGLIVRMQLGEP 227
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+ R++ S+ +++GKGG IK I+E S A + V SD L ER ++++G + V
Sbjct: 155 YVHFRMLCTISEAATVVGKGGETIKKIKELSNARINV-SDNLKGVPERVISVRGPAEYVA 213
Query: 584 QAIYQICLIMVDSP 597
+A I + + P
Sbjct: 214 KAFGLIVRMQLGEP 227
>gi|405122865|gb|AFR97631.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 357
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFR 496
Q MR ++ ++ IIG+ G V ++RE+S +++ +S+S PERI+ V G +D++ +
Sbjct: 79 QISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDAVAK 138
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF LI + I + + G S+ + ++ I+P S+ GS+IGKGGS+IK I+E SGA
Sbjct: 139 AFGLIVRRINDEPFDVPSVPG----SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGA 194
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYR 606
+ + MLP STER +++ GV DAV A+Y I I++ D P AT Y+
Sbjct: 195 RLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTILLEYQDRYPANATGSYK 247
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 98/158 (62%), Gaps = 9/158 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIG+ G V ++RE+S +++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 94 IIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDAVAKAFGLIVRRINDEPFD 153
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ I+P S+ GS+IGKGGS+IK I+E SGA + + MLP STER
Sbjct: 154 VPSVPG----SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTER 209
Query: 127 EVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYR 161
+++ GV DAV A+Y I I++ D P AT Y+
Sbjct: 210 VLSVSGVADAVHIAVYYIGTILLEYQDRYPANATGSYK 247
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE-----EEDSNDRTITMTGT 317
T+++ +PN L+GA+IG+GG+KI EIR S IR++ + +R +T+TG
Sbjct: 268 TQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGY 327
Query: 318 PDAIALAQYLINMSVELLRANLNGEGGG 345
PD I A L+ VE RA L + G
Sbjct: 328 PDNINAAVALLYSRVEAERAKLVEQNAG 355
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE-----EEDSNDRTITMTGT 762
T+++ +PN L+GA+IG+GG+KI EIR S IR++ + +R +T+TG
Sbjct: 268 TQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGY 327
Query: 763 PDAIALAQYLINMSVELLRANLNGEGGG 790
PD I A L+ VE RA L + G
Sbjct: 328 PDNINAAVALLYSRVEAERAKLVEQNAG 355
>gi|32564028|ref|NP_491825.2| Protein F26B1.2, isoform c [Caenorhabditis elegans]
gi|373218907|emb|CCD64193.1| Protein F26B1.2, isoform c [Caenorhabditis elegans]
Length = 380
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 154/348 (44%), Gaps = 28/348 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K G+IIGK GE +K+LR E + + + DS+TPER+ TV ++ +
Sbjct: 35 VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDV 94
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+E+ E ++R++V S G++IG+ GS+IK +RE A + +
Sbjct: 95 LPRLEDNFS----------ERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIF 144
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
+ P ST+R + G V I ++ + + P KG+ PY LP P I +
Sbjct: 145 TGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPY--LPAFNYDPSNISDY 202
Query: 622 FGMQNSL-MGAPDMGNNP---LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G ++ G P P G G + GG + G + A Q +
Sbjct: 203 GGFPGNMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEAGDFQQFRGGPG 262
Query: 678 P--------RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
P Q Q N G T ++T+P++L G +IG+GG +I
Sbjct: 263 PVPGYAMSAPGYPPQQGQFGAPNNAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGERI 322
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
IR+ SGA I + +S+ + E R IT+ GT I AQYL+ V
Sbjct: 323 ARIRQESGAQITLEQSNGQPE----RIITIKGTEQQIHSAQYLLQQCV 366
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 150/341 (43%), Gaps = 28/341 (8%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G+IIGK GE +K+LR E + + + DS+TPER+ TV ++ + +E+
Sbjct: 42 KSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDN 101
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
E ++R++V S G++IG+ GS+IK +RE A + + + P S
Sbjct: 102 FS----------ERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGS 151
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSL 183
T+R + G V I ++ + + P KG+ PY LP P I + G ++
Sbjct: 152 TDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPY--LPAFNYDPSNISDYGGFPGNM 209
Query: 184 -MGAPDMGNNP---LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP------ 233
G P P G G + GG + G + A Q + P
Sbjct: 210 PAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEAGDFQQFRGGPGPVPGYAM 269
Query: 234 --RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
Q Q N G T ++T+P++L G +IG+GG +I IR+ S
Sbjct: 270 SAPGYPPQQGQFGAPNNAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQES 329
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
GA I + +S+ + E R IT+ GT I AQYL+ V
Sbjct: 330 GAQITLEQSNGQPE----RIITIKGTEQQIHSAQYLLQQCV 366
>gi|25144314|ref|NP_740869.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
gi|373218905|emb|CCD64191.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
Length = 397
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 154/348 (44%), Gaps = 28/348 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K G+IIGK GE +K+LR E + + + DS+TPER+ TV ++ +
Sbjct: 52 VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDV 111
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+E+ E ++R++V S G++IG+ GS+IK +RE A + +
Sbjct: 112 LPRLEDNFS----------ERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIF 161
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
+ P ST+R + G V I ++ + + P KG+ PY LP P I +
Sbjct: 162 TGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPY--LPAFNYDPSNISDY 219
Query: 622 FGMQNSL-MGAPDMGNNP---LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G ++ G P P G G + GG + G + A Q +
Sbjct: 220 GGFPGNMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEAGDFQQFRGGPG 279
Query: 678 P--------RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
P Q Q N G T ++T+P++L G +IG+GG +I
Sbjct: 280 PVPGYAMSAPGYPPQQGQFGAPNNAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGERI 339
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
IR+ SGA I + +S+ + E R IT+ GT I AQYL+ V
Sbjct: 340 ARIRQESGAQITLEQSNGQPE----RIITIKGTEQQIHSAQYLLQQCV 383
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 150/341 (43%), Gaps = 28/341 (8%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G+IIGK GE +K+LR E + + + DS+TPER+ TV ++ + +E+
Sbjct: 59 KSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDN 118
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
E ++R++V S G++IG+ GS+IK +RE A + + + P S
Sbjct: 119 FS----------ERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGS 168
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSL 183
T+R + G V I ++ + + P KG+ PY LP P I + G ++
Sbjct: 169 TDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPY--LPAFNYDPSNISDYGGFPGNM 226
Query: 184 -MGAPDMGNNP---LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP------ 233
G P P G G + GG + G + A Q + P
Sbjct: 227 PAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEAGDFQQFRGGPGPVPGYAM 286
Query: 234 --RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
Q Q N G T ++T+P++L G +IG+GG +I IR+ S
Sbjct: 287 SAPGYPPQQGQFGAPNNAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQES 346
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
GA I + +S+ + E R IT+ GT I AQYL+ V
Sbjct: 347 GAQITLEQSNGQPE----RIITIKGTEQQIHSAQYLLQQCV 383
>gi|328851244|gb|EGG00400.1| hypothetical protein MELLADRAFT_39696 [Melampsora larici-populina
98AG31]
Length = 420
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 106/170 (62%), Gaps = 7/170 (4%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+MR ++ ++ IIGK G + ++RE+SG++ IS++ ERI++V G +D++ +AF
Sbjct: 91 QMRALIVTQDASIIIGKGGRHINEIREKSGARATISEAVPGNAERILSVGGPLDAVSKAF 150
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I + + G S+ + +R +VP S+ GS+IGK GS+IK I++ SGA V
Sbjct: 151 GLIVRRINDEPFDVPSVPG----SRAVTIRFVVPNSRMGSVIGKAGSKIKEIQDMSGARV 206
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK-GATIPYRP 607
+ MLP STER +++ GV DAV A+Y + +I+V++ + A YRP
Sbjct: 207 QASEAMLPGSTERVLSVSGVADAVHIAVYYVGMILVENQDRMPANTTYRP 256
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 99/157 (63%), Gaps = 7/157 (4%)
Query: 9 IIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G + ++RE+SG++ IS++ ERI++V G +D++ +AF LI + I + +
Sbjct: 104 IIGKGGRHINEIREKSGARATISEAVPGNAERILSVGGPLDAVSKAFGLIVRRINDEPFD 163
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + +R +VP S+ GS+IGK GS+IK I++ SGA V + MLP STER
Sbjct: 164 VPSVPG----SRAVTIRFVVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEAMLPGSTER 219
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPK-GATIPYRP 162
+++ GV DAV A+Y + +I+V++ + A YRP
Sbjct: 220 VLSVSGVADAVHIAVYYVGMILVENQDRMPANTTYRP 256
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
+Q IQ+R ++ IIGKGG I IRE SGA + S+ +P + ER +++ G DA
Sbjct: 87 TQTIQMRALIVTQDASIIIGKGGRHINEIREKSGARATI-SEAVPGNAERILSVGGPLDA 145
Query: 137 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
V++A I + D P ++P G + +F + NS MG+
Sbjct: 146 VSKAFGLIVRRINDEPFDVPSVP---------GSRAVTIRFVVPNSRMGS 186
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
+Q IQ+R ++ IIGKGG I IRE SGA + S+ +P + ER +++ G DA
Sbjct: 87 TQTIQMRALIVTQDASIIIGKGGRHINEIREKSGARATI-SEAVPGNAERILSVGGPLDA 145
Query: 582 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 631
V++A I + D P ++P G + +F + NS MG+
Sbjct: 146 VSKAFGLIVRRINDEPFDVPSVP---------GSRAVTIRFVVPNSRMGS 186
>gi|393236643|gb|EJD44191.1| eukaryotic type KH-domain (KH-domain type I) [Auricularia delicata
TFB-10046 SS5]
Length = 450
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 106/180 (58%), Gaps = 10/180 (5%)
Query: 436 TGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDS 493
TG MR ++ ++ IIGK G V ++RE+SG+++ +S+S PERI+ V G +D+
Sbjct: 93 TGAMIHMRCLIVTQDASIIIGKGGAHVNEIREKSGARVVVSESIPGNPERILNVSGPLDA 152
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
+ +AF LI + I + + G S+ + ++ ++P S+ GS+IGKGG +IK I+E
Sbjct: 153 VSKAFGLIVRRINDEPFDVPSVPG----SRAVTIKFMIPNSRMGSVIGKGGVKIKEIQEA 208
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP----PKGATIPYRPLP 609
SGA + + +LP STER +++ GV DA+ A Y I I++++ P YRP P
Sbjct: 209 SGARLNASEGVLPGSTERVLSVAGVADAIHIATYYIGNILLEAQAHGGPHSNHASYRPAP 268
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 98/162 (60%), Gaps = 10/162 (6%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 111 IIGKGGAHVNEIREKSGARVVVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 170
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGKGG +IK I+E SGA + + +LP STER
Sbjct: 171 VPSVPG----SRAVTIKFMIPNSRMGSVIGKGGVKIKEIQEASGARLNASEGVLPGSTER 226
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSP----PKGATIPYRPLP 164
+++ GV DA+ A Y I I++++ P YRP P
Sbjct: 227 VLSVAGVADAIHIATYYIGNILLEAQAHGGPHSNHASYRPAP 268
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK---SSEEEEDSNDRTITMTGTPD 319
T+++ +PN+L+G +IGKGG+KI EIR +S + I+I + + + N+R +T+TG P
Sbjct: 364 TQQIFIPNDLVGCIIGKGGSKINEIRHLSASAIKIMEPGVAGDAGGGPNERLVTITGAPH 423
Query: 320 AIALAQYLINMSVE 333
I +A L+ +E
Sbjct: 424 NIQMAVSLLYQRLE 437
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK---SSEEEEDSNDRTITMTGTPD 764
T+++ +PN+L+G +IGKGG+KI EIR +S + I+I + + + N+R +T+TG P
Sbjct: 364 TQQIFIPNDLVGCIIGKGGSKINEIRHLSASAIKIMEPGVAGDAGGGPNERLVTITGAPH 423
Query: 765 AIALAQYLINMSVE 778
I +A L+ +E
Sbjct: 424 NIQMAVSLLYQRLE 437
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I +R ++ IIGKGG+ + IRE SGA V V S+ +P + ER +N+ G DAV+
Sbjct: 96 MIHMRCLIVTQDASIIIGKGGAHVNEIREKSGARV-VVSESIPGNPERILNVSGPLDAVS 154
Query: 139 QAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
+A I + D P ++P G + +F + NS MG+
Sbjct: 155 KAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGS 193
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIGKGG KI EI++ SGA R++ S S +R +++ G DAI
Sbjct: 180 VTIKFMIPNSRMGSVIGKGGVKIKEIQEASGA--RLNASEGVLPGSTERVLSVAGVADAI 237
Query: 322 ALAQYLI-NMSVELLRANLNGEGGGESNMDDF 352
+A Y I N+ LL A GG SN +
Sbjct: 238 HIATYYIGNI---LLEA--QAHGGPHSNHASY 264
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G+VIGKGG KI EI++ SGA R++ S S +R +++ G DAI
Sbjct: 180 VTIKFMIPNSRMGSVIGKGGVKIKEIQEASGA--RLNASEGVLPGSTERVLSVAGVADAI 237
Query: 767 ALAQYLI-NMSVELLRANLNGEGGGESNMDDF 797
+A Y I N+ LL A GG SN +
Sbjct: 238 HIATYYIGNI---LLEA--QAHGGPHSNHASY 264
>gi|395333911|gb|EJF66288.1| hypothetical protein DICSQDRAFT_159257 [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 120/222 (54%), Gaps = 11/222 (4%)
Query: 401 GLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGE 460
G SD G G+S P G + + MR ++ ++ IIGK G
Sbjct: 64 GPSDAAASGDGAESRGDSATASTAPGGTGSGSTPAANIH--MRCLIVTQDASIIIGKGGS 121
Query: 461 TVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGG 518
V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + ++ G
Sbjct: 122 HVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFDKPSVPG- 180
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
S+ + ++ ++P S+ GS+IGKGG++IK I++ SGA + + MLP STER +++ GV
Sbjct: 181 ---SRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERLLSVSGV 237
Query: 579 PDAVTQAIYQICLIMVDS---PPKGATIPYRPLPQNAGGPGL 617
DA+ A Y I I++++ P YRP Q+ P +
Sbjct: 238 ADAIHIATYYIGNILIEANERMPSSNHSTYRPTSQSRRPPYM 279
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 103/169 (60%), Gaps = 9/169 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 115 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 174
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
+ G S+ + ++ ++P S+ GS+IGKGG++IK I++ SGA + + MLP STER
Sbjct: 175 KPSVPG----SRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTER 230
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDS---PPKGATIPYRPLPQNAGGPGL 172
+++ GV DA+ A Y I I++++ P YRP Q+ P +
Sbjct: 231 LLSVSGVADAIHIATYYIGNILIEANERMPSSNHSTYRPTSQSRRPPYM 279
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 101 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSK 159
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
A I + D P ++P G + +F + NS MG+
Sbjct: 160 AFGLIVRRINDEPFDKPSVP---------GSRAVTIKFMIPNSRMGS 197
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIGKGGTKI EI+ SGA R++ S S +R ++++G DAI
Sbjct: 184 VTIKFMIPNSRMGSVIGKGGTKIKEIQDASGA--RLNASEGMLPGSTERLLSVSGVADAI 241
Query: 322 ALAQYLI-NMSVE 333
+A Y I N+ +E
Sbjct: 242 HIATYYIGNILIE 254
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G+VIGKGGTKI EI+ SGA R++ S S +R ++++G DAI
Sbjct: 184 VTIKFMIPNSRMGSVIGKGGTKIKEIQDASGA--RLNASEGMLPGSTERLLSVSGVADAI 241
Query: 767 ALAQYLI-NMSVE 778
+A Y I N+ +E
Sbjct: 242 HIATYYIGNILIE 254
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK----------SSEEEEDSNDRTI 312
T+++ +PN+L+G +IGKGG KI EIR +S + I+I + + +R +
Sbjct: 311 TQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNGAPAPAGSEGERLV 370
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGE 342
+TG P I M+V+LL + L E
Sbjct: 371 VITGQPAN-------IQMAVQLLYSRLEQE 393
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK----------SSEEEEDSNDRTI 757
T+++ +PN+L+G +IGKGG KI EIR +S + I+I + + +R +
Sbjct: 311 TQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNGAPAPAGSEGERLV 370
Query: 758 TMTGTPDAIALAQYLINMSVELLRANLNGE 787
+TG P I M+V+LL + L E
Sbjct: 371 VITGQPAN-------IQMAVQLLYSRLEQE 393
>gi|294655167|ref|XP_457273.2| DEHA2B07238p [Debaryomyces hansenii CBS767]
gi|199429743|emb|CAG85274.2| DEHA2B07238p [Debaryomyces hansenii CBS767]
Length = 486
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 170/367 (46%), Gaps = 46/367 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +++GK GE + +R+++ +I +S++ + PERIV+V G +++ RAF LIT+ I
Sbjct: 119 KEASTVVGKKGEKINHIRDKANVRINVSENLKNVPERIVSVRGPAENVARAFGLITRTIL 178
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E +++ + S+ L+L++P G IIGK G + + I E S A + A LP
Sbjct: 179 EEPEDEPASML----SRQYNLKLLIPHPMVGYIIGKQGVKFREIEENSAAKLKAAEQPLP 234
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
ST+R ++I GV DA+ AIY I +++ D K + Y P N + N
Sbjct: 235 YSTDRILSITGVGDAIHIAIYYISQVVIEHKDCLKKNKVVFYNPA--NYHHTNVNNNMNN 292
Query: 179 MQNSLMGAPDMGN-------NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 231
++ P N NPLA + N+ + + H
Sbjct: 293 NMVNMSMMPSNSNMMAMGGANPLAMQGMASMKDNANPYTQQPKQPYNFQMMFQPSIHPQH 352
Query: 232 -------------MPRNQNQNQNQHNRNNRDG-----PSQKTNQQQNQITKEMTVPNELI 273
+P QNQ ++H NN G P + ++ +++ V N I
Sbjct: 353 QYVATPAPTSSMTLPP-QNQYTDEHG-NNMIGDVITSPPVQVGSTTDKFNEDVFVANANI 410
Query: 274 GAVIGKGGTKIFEIRKISGA-MIRISKSSEE-------EEDSNDRTITMTGTPDAIALAQ 325
G+VIGKGG I +IR+ SG ++I + + +N R +T+TG+ +I +A
Sbjct: 411 GSVIGKGGNNIKQIRENSGCTYVKIEPDQRQSLMLGGGKGLTNIRKLTLTGSLQSIQMAI 470
Query: 326 YLINMSV 332
YLIN +
Sbjct: 471 YLINQRI 477
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 170/367 (46%), Gaps = 46/367 (12%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 506
KE +++GK GE + +R+++ +I +S++ + PERIV+V G +++ RAF LIT+ I
Sbjct: 119 KEASTVVGKKGEKINHIRDKANVRINVSENLKNVPERIVSVRGPAENVARAFGLITRTIL 178
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E +++ + S+ L+L++P G IIGK G + + I E S A + A LP
Sbjct: 179 EEPEDEPASML----SRQYNLKLLIPHPMVGYIIGKQGVKFREIEENSAAKLKAAEQPLP 234
Query: 567 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRPLPQNAGGPGLIGNQFG 623
ST+R ++I GV DA+ AIY I +++ D K + Y P N + N
Sbjct: 235 YSTDRILSITGVGDAIHIAIYYISQVVIEHKDCLKKNKVVFYNPA--NYHHTNVNNNMNN 292
Query: 624 MQNSLMGAPDMGN-------NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
++ P N NPLA + N+ + + H
Sbjct: 293 NMVNMSMMPSNSNMMAMGGANPLAMQGMASMKDNANPYTQQPKQPYNFQMMFQPSIHPQH 352
Query: 677 -------------MPRNQNQNQNQHNRNNRDG-----PSQKTNQQQNQITKEMTVPNELI 718
+P QNQ ++H NN G P + ++ +++ V N I
Sbjct: 353 QYVATPAPTSSMTLPP-QNQYTDEHG-NNMIGDVITSPPVQVGSTTDKFNEDVFVANANI 410
Query: 719 GAVIGKGGTKIFEIRKISGA-MIRISKSSEE-------EEDSNDRTITMTGTPDAIALAQ 770
G+VIGKGG I +IR+ SG ++I + + +N R +T+TG+ +I +A
Sbjct: 411 GSVIGKGGNNIKQIRENSGCTYVKIEPDQRQSLMLGGGKGLTNIRKLTLTGSLQSIQMAI 470
Query: 771 YLINMSV 777
YLIN +
Sbjct: 471 YLINQRI 477
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 70 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
H + + R+ P + +++GK G +I IR+ + + V S+ L N ER V+
Sbjct: 100 HREKERDPTYVMFRMYCPVKEASTVVGKKGEKINHIRDKANVRINV-SENLKNVPERIVS 158
Query: 130 IKGVPDAVTQAIYQICLIMVDSP 152
++G + V +A I +++ P
Sbjct: 159 VRGPAENVARAFGLITRTILEEP 181
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 515 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
H + + R+ P + +++GK G +I IR+ + + V S+ L N ER V+
Sbjct: 100 HREKERDPTYVMFRMYCPVKEASTVVGKKGEKINHIRDKANVRINV-SENLKNVPERIVS 158
Query: 575 IKGVPDAVTQAIYQICLIMVDSP 597
++G + V +A I +++ P
Sbjct: 159 VRGPAENVARAFGLITRTILEEP 181
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 169/349 (48%), Gaps = 49/349 (14%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ K GS+IGK+G T+ +++ SG+K+ +S +S T +RIV + G +++
Sbjct: 35 QMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKVET 94
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
+ A ++ I E +++ N + + ++ + +++PA+ CG +IGKGG +I ++RE
Sbjct: 95 VLSAAKMV---ISEMYRDPNSGRVPDDVNAVMTVSIVIPAAACGLVIGKGGEKINSLREE 151
Query: 554 SGASVYV-ASD--MLPNSTEREVNIKG-VPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
+ A + + A D +P ER V I+G +P A T + LI D I Y L
Sbjct: 152 TQAKIQLQAKDKVAIPGLNERIVTIQGTLPQAQTAVEKIVHLIHED-----GNIRYENLG 206
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
N G G++G G MG P+ G AA M GG+ +AS
Sbjct: 207 TNYGMSGMMGKGLGQ------GYGMGMMPMQGAAA----------MYGGMQMPMGMDMAS 250
Query: 670 SQLKT-----NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 724
+ +P + +QH G T ++++ ++ +G ++GK
Sbjct: 251 QGMGMAPGMPGVVPGQEYWGMSQHGL----GTDMHT-------VLKLSITDDAVGPLLGK 299
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
GG + E +SGA I++S+ + +N+R IT+ GT A+ AQ L+
Sbjct: 300 GGCNLKEYISVSGANIKVSQRGDTIPGTNNRYITIQGTAAAVQYAQLLV 348
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 164/339 (48%), Gaps = 49/339 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITK 58
K GS+IGK+G T+ +++ SG+K+ +S +S T +RIV + G ++++ A ++
Sbjct: 45 KSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKVETVLSAAKMV-- 102
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-AS 117
I E +++ N + + ++ + +++PA+ CG +IGKGG +I ++RE + A + + A
Sbjct: 103 -ISEMYRDPNSGRVPDDVNAVMTVSIVIPAAACGLVIGKGGEKINSLREETQAKIQLQAK 161
Query: 118 D--MLPNSTEREVNIKG-VPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIG 174
D +P ER V I+G +P A T + LI D I Y L N G G++G
Sbjct: 162 DKVAIPGLNERIVTIQGTLPQAQTAVEKIVHLIHED-----GNIRYENLGTNYGMSGMMG 216
Query: 175 NQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT----- 229
G MG P+ G AA M GG+ +AS +
Sbjct: 217 KGLGQ------GYGMGMMPMQGAAA----------MYGGMQMPMGMDMASQGMGMAPGMP 260
Query: 230 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
+P + +QH G T ++++ ++ +G ++GKGG + E
Sbjct: 261 GVVPGQEYWGMSQHGL----GTDMHT-------VLKLSITDDAVGPLLGKGGCNLKEYIS 309
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+SGA I++S+ + +N+R IT+ GT A+ AQ L+
Sbjct: 310 VSGANIKVSQRGDTIPGTNNRYITIQGTAAAVQYAQLLV 348
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDMLPNSTEREVNIK 131
+G+ + L++++ GS+IGK G+ I +I++TSGA V V+ S+ P + +R V I
Sbjct: 30 SGDETQMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLIS 89
Query: 132 GVPDAVTQAIYQICLIMVDSPPKG 155
G + V A + M P G
Sbjct: 90 GKVETVLSAAKMVISEMYRDPNSG 113
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDMLPNSTEREVNIK 576
+G+ + L++++ GS+IGK G+ I +I++TSGA V V+ S+ P + +R V I
Sbjct: 30 SGDETQMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLIS 89
Query: 577 GVPDAVTQAIYQICLIMVDSPPKG 600
G + V A + M P G
Sbjct: 90 GKVETVLSAAKMVISEMYRDPNSG 113
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
+ Q+ ++ + N+ G+VIGK G I I+ SGA +++S +SE + DR + ++G
Sbjct: 33 ETQMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKV 92
Query: 319 DAIALAQYLI 328
+ + A ++
Sbjct: 93 ETVLSAAKMV 102
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%)
Query: 704 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 763
+ Q+ ++ + N+ G+VIGK G I I+ SGA +++S +SE + DR + ++G
Sbjct: 33 ETQMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKV 92
Query: 764 DAIALAQYLI 773
+ + A ++
Sbjct: 93 ETVLSAAKMV 102
>gi|449546975|gb|EMD37943.1| hypothetical protein CERSUDRAFT_82176 [Ceriporiopsis subvermispora
B]
Length = 433
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 102/160 (63%), Gaps = 10/160 (6%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 113 HMRCLIVTQDASIIIGKGGSHVNEIREQSGARVVVSESIPGNPERILNVSGPLDAVSKAF 172
Query: 499 SLITKNI--EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI + I E F K + G S+ + ++ ++P S+ GS+IGKGG++IK I++ SGA
Sbjct: 173 GLIVRRINDEPFDK---PSVPG---SRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGA 226
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
+ + MLP STER +++ GV DA+ A Y I I++++
Sbjct: 227 RLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNILIEA 266
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 96/147 (65%), Gaps = 10/147 (6%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNI--EEFH 64
IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I E F
Sbjct: 126 IIGKGGSHVNEIREQSGARVVVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 185
Query: 65 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 124
K + G S+ + ++ ++P S+ GS+IGKGG++IK I++ SGA + + MLP ST
Sbjct: 186 K---PSVPG---SRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGST 239
Query: 125 EREVNIKGVPDAVTQAIYQICLIMVDS 151
ER +++ GV DA+ A Y I I++++
Sbjct: 240 ERVLSVSGVADAIHIATYYIGNILIEA 266
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 112 IHMRCLIVTQDASIIIGKGGSHVNEIREQSGARV-VVSESIPGNPERILNVSGPLDAVSK 170
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
A I + D P ++P G + +F + NS MG+
Sbjct: 171 AFGLIVRRINDEPFDKPSVP---------GSRAVTIKFMIPNSRMGS 208
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIGKGGTKI EI+ SGA R++ S S +R ++++G DAI
Sbjct: 195 VTIKFMIPNSRMGSVIGKGGTKIKEIQDASGA--RLNASEGMLPGSTERVLSVSGVADAI 252
Query: 322 ALAQYLI-NMSVE 333
+A Y I N+ +E
Sbjct: 253 HIATYYIGNILIE 265
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G+VIGKGGTKI EI+ SGA R++ S S +R ++++G DAI
Sbjct: 195 VTIKFMIPNSRMGSVIGKGGTKIKEIQDASGA--RLNASEGMLPGSTERVLSVSGVADAI 252
Query: 767 ALAQYLI-NMSVE 778
+A Y I N+ +E
Sbjct: 253 HIATYYIGNILIE 265
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 89/166 (53%), Gaps = 16/166 (9%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K GSIIGK G + KLR E + + + D PERI+TV +D++ R S I
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVPDCPGPERILTVAADLDTMLRVVSEI 84
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
N+E+ +I +R++V SQ G IIGKGG +IK +RE +GA + +
Sbjct: 85 LPNLED----------------VIDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIY 128
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
S+ P ST+R V I G + AI + ++ SP KG PY P
Sbjct: 129 SNCCPQSTDRIVQINGKGNLCVDAIRECMELLKTSPIKGMNNPYDP 174
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K GSIIGK G + KLR E + + + D PERI+TV +D++ R S I N+E+
Sbjct: 32 KVAGSIIGKGGHNISKLRTEHNASVTVPDCPGPERILTVAADLDTMLRVVSEILPNLED- 90
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
+I +R++V SQ G IIGKGG +IK +RE +GA + + S+ P S
Sbjct: 91 ---------------VIDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSNCCPQS 135
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
T+R V I G + AI + ++ SP KG PY P
Sbjct: 136 TDRIVQINGKGNLCVDAIRECMELLKTSPIKGMNNPYDP 174
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 107/170 (62%), Gaps = 5/170 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK G+ V ++R+ S +++ ISD ERI+TV+G + ++ +A++
Sbjct: 81 LRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVGPVSAVAKAYA 140
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
L+ + I E + + G Q + +++++ A++ GSIIGK GS I++I+ETSGA V
Sbjct: 141 LVAEKIIEENTLAEDNKGPI--QQDVTIKILILANRMGSIIGKSGSVIRSIQETSGAKVS 198
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP-PKGATIPYRPL 608
+ LP STER V I G PDA+ QA+ +I I+VD P G + Y+P+
Sbjct: 199 AQEEPLPLSTERVVTIHGTPDAIEQAVKKIGDILVDQPNHHGNYMLYKPI 248
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK G+ V ++R+ S +++ ISD ERI+TV+G + ++ +A++L+ + I
Sbjct: 88 KDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVGPVSAVAKAYALVAEKII 147
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E + + G Q + +++++ A++ GSIIGK GS I++I+ETSGA V + LP
Sbjct: 148 EENTLAEDNKGPI--QQDVTIKILILANRMGSIIGKSGSVIRSIQETSGAKVSAQEEPLP 205
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSP-PKGATIPYRPL 163
STER V I G PDA+ QA+ +I I+VD P G + Y+P+
Sbjct: 206 LSTERVVTIHGTPDAIEQAVKKIGDILVDQPNHHGNYMLYKPI 248
Score = 47.0 bits (110), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 413 GGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKE-------VGSIIGKSGETVKKL 465
GGSG G +P P +N+ G M Q ++ VG IIGK G + ++
Sbjct: 315 GGSGGRQGDYPLPMMPGLSNLSMMGGLSNMMPATQSQQIYIPNEMVGCIIGKGGMKINEI 374
Query: 466 REESGSKIYISDSSTP--ERIVTVIGSMDSLFRAFSLITKNIEEFHK 510
R+ SGS I I+D ST ER++T+ G+ +S A L+ +E K
Sbjct: 375 RQTSGSHIKIADPSTDSHERLITITGTPESNQMALYLLYSRLEAEQK 421
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP--ERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG IIGK G + ++R+ SGS I I+D ST ER++T+ G+ +S A L+ +E
Sbjct: 360 VGCIIGKGGMKINEIRQTSGSHIKIADPSTDSHERLITITGTPESNQMALYLLYSRLEAE 419
Query: 64 HK 65
K
Sbjct: 420 QK 421
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I LR +V G IIGKGG + IR++S A V + SD++P + ER + + G AV +
Sbjct: 79 ISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNI-SDIVPGAAERILTVVGPVSAVAK 137
Query: 140 A 140
A
Sbjct: 138 A 138
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I LR +V G IIGKGG + IR++S A V + SD++P + ER + + G AV +
Sbjct: 79 ISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNI-SDIVPGAAERILTVVGPVSAVAK 137
Query: 585 A 585
A
Sbjct: 138 A 138
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 196/449 (43%), Gaps = 88/449 (19%)
Query: 376 ALPQLAQIL----TKPGALNALTSLSALGGLSDLLGGGSSGGGS--------GNSGGFGG 423
AL QL ++ T A+N +T+ G+S +G +S G S N +
Sbjct: 130 ALGQLGSLINAYGTSTPAINPITN----SGVSQAIGTTTSYGTSQAYDPVPFANHLDYTS 185
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STP 481
P + A + R KE +IGK G+ + LRE++ ++I +S++
Sbjct: 186 RPMANHQAERELDPTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQ 245
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
ERI+ V G +++ +AF LIT+ I E +++ + S+ L++++P G IIG
Sbjct: 246 ERIILVKGPAENVAKAFGLITRAILEEPEDEPASIM----SRQYNLKVLIPHPMVGYIIG 301
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV---DSPP 598
KGGS+ + I E S A + A LPNST+R +++ GV DA+ AIY I +++ D
Sbjct: 302 KGGSKFREIEENSAAKLKAAEQPLPNSTDRVLSVLGVGDAIHIAIYYISQVIIEHKDILK 361
Query: 599 KGATIPYRPLPQNAGGPGLIGNQFGM--QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
K + Y P G L+ N G+ N+ +GN+P+ G A
Sbjct: 362 KHKIVYYTP-----GNNQLMNNTMGLIPNNTYGNTGIIGNDPIQGGAPF----------- 405
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ------------ 704
++ R + HN+ P+Q +
Sbjct: 406 -----------------QHNYQRQFQPSAPSHNQITTPVPTQLYTDEHGNTMIGDVITSV 448
Query: 705 --------NQITKEMTVPNELIGAVIGKGGTKIFEIRKISG-AMIRISKSSEE------- 748
++ ++++ V N IG+VIGKGG I +IR+ SG + ++I +
Sbjct: 449 PVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVKIEPDQHQTIMLGRG 508
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMSV 777
++ R +T+TG+ + I A YLIN +
Sbjct: 509 RGLTSIRKLTLTGSINLIQTAIYLINQRI 537
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 167/364 (45%), Gaps = 72/364 (19%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +IGK G+ + LRE++ ++I +S++ ERI+ V G +++ +AF LIT+ I
Sbjct: 211 KEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIILVKGPAENVAKAFGLITRAIL 270
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E +++ + S+ L++++P G IIGKGGS+ + I E S A + A LP
Sbjct: 271 EEPEDEPASIM----SRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKAAEQPLP 326
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
NST+R +++ GV DA+ AIY I +++ D K + Y P G L+ N G
Sbjct: 327 NSTDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKHKIVYYTP-----GNNQLMNNTMG 381
Query: 179 M--QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+ N+ +GN+P+ G A ++ R
Sbjct: 382 LIPNNTYGNTGIIGNDPIQGGAPF----------------------------QHNYQRQF 413
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQ--------------------NQITKEMTVPNELIGAV 276
+ HN+ P+Q + ++ ++++ V N IG+V
Sbjct: 414 QPSAPSHNQITTPVPTQLYTDEHGNTMIGDVITSVPVPAGTGTDKFSEDVFVANTNIGSV 473
Query: 277 IGKGGTKIFEIRKISG-AMIRISKSSEE-------EEDSNDRTITMTGTPDAIALAQYLI 328
IGKGG I +IR+ SG + ++I + ++ R +T+TG+ + I A YLI
Sbjct: 474 IGKGGNNIKQIRESSGCSYVKIEPDQHQTIMLGRGRGLTSIRKLTLTGSINLIQTAIYLI 533
Query: 329 NMSV 332
N +
Sbjct: 534 NQRI 537
>gi|268567874|ref|XP_002640100.1| Hypothetical protein CBG12588 [Caenorhabditis briggsae]
Length = 398
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 150/349 (42%), Gaps = 29/349 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K G+IIGK GE +K+LR E + + + DS+TPER+ TV ++ +
Sbjct: 52 VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDV 111
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+E+ E ++R+++ S G++IG+ G++IK +RE A + +
Sbjct: 112 LPRLED----------NFSERDPCEVRVLIHQSHAGALIGRNGTKIKELREKCSARLKIF 161
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
+ P ST+R + G V I ++ + + P KG+ PY LP P I
Sbjct: 162 TGCAPGSTDRVLITSGEQKNVLAIIEEVMKELKEIPIKGSATPY--LPSFHYDPSNISEY 219
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA----ALAALASSQLKTNHM 677
G ++ G N A GG + + A Q + +
Sbjct: 220 GGFPGNVSGGGPQNNRGPAPPRGGQGPPGGPRSYGGAITPGGGPRSFEAGDFHQFRGGPV 279
Query: 678 PRNQNQN---------QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTK 728
P + N Q Q G T ++T+P++L G +IG+GG +
Sbjct: 280 PGQYSMNAPGYAQGPPQGQFGAPANAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGER 339
Query: 729 IFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
I IR+ SGA I + S+ + E R IT+ GT I AQYL+ V
Sbjct: 340 IARIRQESGAQITLEPSNGQPE----RIITIKGTEQQIHSAQYLLQQCV 384
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 146/342 (42%), Gaps = 29/342 (8%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G+IIGK GE +K+LR E + + + DS+TPER+ TV ++ + +E+
Sbjct: 59 KSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLED- 117
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
E ++R+++ S G++IG+ G++IK +RE A + + + P S
Sbjct: 118 ---------NFSERDPCEVRVLIHQSHAGALIGRNGTKIKELREKCSARLKIFTGCAPGS 168
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSL 183
T+R + G V I ++ + + P KG+ PY LP P I G ++
Sbjct: 169 TDRVLITSGEQKNVLAIIEEVMKELKEIPIKGSATPY--LPSFHYDPSNISEYGGFPGNV 226
Query: 184 MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA----ALAALASSQLKTNHMPRNQNQN 239
G N A GG + + A Q + +P + N
Sbjct: 227 SGGGPQNNRGPAPPRGGQGPPGGPRSYGGAITPGGGPRSFEAGDFHQFRGGPVPGQYSMN 286
Query: 240 ---------QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
Q Q G T ++T+P++L G +IG+GG +I IR+
Sbjct: 287 APGYAQGPPQGQFGAPANAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQE 346
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
SGA I + S+ + E R IT+ GT I AQYL+ V
Sbjct: 347 SGAQITLEPSNGQPE----RIITIKGTEQQIHSAQYLLQQCV 384
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-TPERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
G+IIG+ GE + ++R+ESG++I + S+ PERI+T+ G+ + A L+ + + +
Sbjct: 330 GTIIGRGGERIARIRQESGAQITLEPSNGQPERIITIKGTEQQIHSAQYLLQQCVRNSTQ 389
Query: 66 NQNKHLGGN 74
+ + GGN
Sbjct: 390 GRER-FGGN 397
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-TPERIVTVIGSMDSLFRAFSLITKNIEEFHK 510
G+IIG+ GE + ++R+ESG++I + S+ PERI+T+ G+ + A L+ + + +
Sbjct: 330 GTIIGRGGERIARIRQESGAQITLEPSNGQPERIITIKGTEQQIHSAQYLLQQCVRNSTQ 389
Query: 511 NQNKHLGGN 519
+ + GGN
Sbjct: 390 GRER-FGGN 397
>gi|156368623|ref|XP_001627792.1| predicted protein [Nematostella vectensis]
gi|156214712|gb|EDO35692.1| predicted protein [Nematostella vectensis]
Length = 390
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 170/345 (49%), Gaps = 35/345 (10%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+ + ++++ +G++I +S ++ T ERI ++G ++++ + + I
Sbjct: 58 GSIIGKGGQNIAQVQQTTGARIKLSPNNQYYPGTQERIGLIMGEVENIVQMLDFVIDKIR 117
Query: 62 EFHKNQNKHLGGNGESQLI-QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-SDM 119
+ + + + + + Q+++IVP S G IIGK GS IK+I E +GA + ++ D
Sbjct: 118 QEPQGIKASMSISFDRERAKQMKIIVPNSTAGMIIGKAGSAIKSISEQTGARIQISQKDA 177
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
+ ER V + G + VT A C+I+ K P L N GL ++ G
Sbjct: 178 ESVAGERIVCVGGSQEQVTAA----CVIITS---KVQEDPEHALNNNIMYSGLTTSRAGH 230
Query: 180 QNSLMGAPDMGN----NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
N + + + L+GL+ALGL A ++ TNH+
Sbjct: 231 TNGQLAGSAFSSGLPFSALSGLSALGL-------------TNTATAQNTTTSATNHI-LA 276
Query: 236 QNQNQNQHNRNNRDGPSQKT---NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
Q + N NN P T + Q+ T E+TVP+ELIGA++GKGG I E + SG
Sbjct: 277 QAALMSGSNLNNPMAPPTSTATSSSIQSSATLEITVPDELIGAILGKGGKTITEFMQYSG 336
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRA 337
A I++S+ E +++R + +TG A LA +L+ ++ + A
Sbjct: 337 ARIQVSQKGEFVPGTSNRKVVITGDVPAAQLAHFLVTQRIQQVEA 381
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 170/345 (49%), Gaps = 35/345 (10%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
GSIIGK G+ + ++++ +G++I +S ++ T ERI ++G ++++ + + I
Sbjct: 58 GSIIGKGGQNIAQVQQTTGARIKLSPNNQYYPGTQERIGLIMGEVENIVQMLDFVIDKIR 117
Query: 507 EFHKNQNKHLGGNGESQLI-QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-SDM 564
+ + + + + + Q+++IVP S G IIGK GS IK+I E +GA + ++ D
Sbjct: 118 QEPQGIKASMSISFDRERAKQMKIIVPNSTAGMIIGKAGSAIKSISEQTGARIQISQKDA 177
Query: 565 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 624
+ ER V + G + VT A C+I+ K P L N GL ++ G
Sbjct: 178 ESVAGERIVCVGGSQEQVTAA----CVIITS---KVQEDPEHALNNNIMYSGLTTSRAGH 230
Query: 625 QNSLMGAPDMGN----NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 680
N + + + L+GL+ALGL A ++ TNH+
Sbjct: 231 TNGQLAGSAFSSGLPFSALSGLSALGL-------------TNTATAQNTTTSATNHI-LA 276
Query: 681 QNQNQNQHNRNNRDGPSQKT---NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
Q + N NN P T + Q+ T E+TVP+ELIGA++GKGG I E + SG
Sbjct: 277 QAALMSGSNLNNPMAPPTSTATSSSIQSSATLEITVPDELIGAILGKGGKTITEFMQYSG 336
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRA 782
A I++S+ E +++R + +TG A LA +L+ ++ + A
Sbjct: 337 ARIQVSQKGEFVPGTSNRKVVITGDVPAAQLAHFLVTQRIQQVEA 381
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS----DSSTPERIVTVIGSMDSLF 495
++M+ I+ G IIGK+G +K + E++G++I IS +S ERIV V GS + +
Sbjct: 137 KQMKIIVPNSTAGMIIGKAGSAIKSISEQTGARIQISQKDAESVAGERIVCVGGSQEQVT 196
Query: 496 RAFSLITKNIEE 507
A +IT ++E
Sbjct: 197 AACVIITSKVQE 208
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 114/275 (41%), Gaps = 64/275 (23%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ VPN G +IGK G+ I I + +GA I+IS+ + E + +R + + G+ + + A
Sbjct: 140 KIIVPNSTAGMIIGKAGSAIKSISEQTGARIQISQK-DAESVAGERIVCVGGSQEQVTAA 198
Query: 325 QYLINMSVE----------LLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLA 374
+I V+ ++ + L G +N G A + +
Sbjct: 199 CVIITSKVQEDPEHALNNNIMYSGLTTSRAGHTN-----------------GQLAGSAFS 241
Query: 375 AALPQLAQILTKPGALNALTSLSALG-------------GLSDLLGGGSSGGGSGNSGGF 421
+ LP +AL+ LSALG + +L + GS +
Sbjct: 242 SGLP-----------FSALSGLSALGLTNTATAQNTTTSATNHILAQAALMSGSNLNN-- 288
Query: 422 GGVPQGPNYANIQTTGVQRR--MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS- 478
P P + ++ +Q + + + +G+I+GK G+T+ + + SG++I +S
Sbjct: 289 ---PMAPPTSTATSSSIQSSATLEITVPDELIGAILGKGGKTITEFMQYSGARIQVSQKG 345
Query: 479 ----STPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
T R V + G + + A L+T+ I++
Sbjct: 346 EFVPGTSNRKVVITGDVPAAQLAHFLVTQRIQQVE 380
>gi|241956872|ref|XP_002421156.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223644499|emb|CAX41315.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 533
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 173/392 (44%), Gaps = 67/392 (17%)
Query: 436 TGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDS 493
T +Q RM KE +I+G+ GET+ LRE++ +I +S++ PERIV V G ++
Sbjct: 158 TFIQLRM--YCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKGPAEN 215
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
+ RAF LIT+ I E +++ + SQ L+L++P G IIGK G + + I E
Sbjct: 216 VARAFGLITRVILEEPEDEPASIT----SQQYNLKLLIPHPMIGFIIGKQGLKFREIEEN 271
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRPL-P 609
S A + A + LP ST+R +++ GV DA+ A+Y I +M++ K + Y P
Sbjct: 272 SAAKLKAAENPLPYSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKNKVVLYNPANY 331
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
Q L G Q N+ NNP+ A L + + +
Sbjct: 332 QPTDHQNLGGRQRHPPNNSY------NNPMGYQAKLPPFSKPPHHSQHQQSPYNFSMMFQ 385
Query: 670 SQLKTNHM--PRNQNQN---------------QNQHNR---NNRDG------PSQKTNQQ 703
++ H P N N QNQ+ N G P Q +
Sbjct: 386 PAVQPQHFGTPVTSNPNAISPVGMQPSINVPPQNQYTDEFGNTIVGEVITTPPVQAGQDK 445
Query: 704 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEED----------- 751
NQ ++ V N IG+VIGKGG I IR+ S ++I E D
Sbjct: 446 YNQ---DVFVANSSIGSVIGKGGNNIKHIRETSACTYVKI------EPDKGQSMMLGGGK 496
Query: 752 --SNDRTITMTGTPDAIALAQYLINMSVELLR 781
+N R +T+TG+ ++I A YLIN + R
Sbjct: 497 GMTNIRKLTLTGSLNSIQTAIYLINQRINADR 528
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 168/379 (44%), Gaps = 65/379 (17%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +I+G+ GET+ LRE++ +I +S++ PERIV V G +++ RAF LIT+ I
Sbjct: 169 KEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKGPAENVARAFGLITRVIL 228
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E +++ + SQ L+L++P G IIGK G + + I E S A + A + LP
Sbjct: 229 EEPEDEPASIT----SQQYNLKLLIPHPMIGFIIGKQGLKFREIEENSAAKLKAAENPLP 284
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRPL-PQNAGGPGLIGNQF 177
ST+R +++ GV DA+ A+Y I +M++ K + Y P Q L G Q
Sbjct: 285 YSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKNKVVLYNPANYQPTDHQNLGGRQR 344
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM--PRN 235
N+ NNP+ A L + + + ++ H P
Sbjct: 345 HPPNNSY------NNPMGYQAKLPPFSKPPHHSQHQQSPYNFSMMFQPAVQPQHFGTPVT 398
Query: 236 QNQN---------------QNQHNR---NNRDG------PSQKTNQQQNQITKEMTVPNE 271
N N QNQ+ N G P Q + NQ ++ V N
Sbjct: 399 SNPNAISPVGMQPSINVPPQNQYTDEFGNTIVGEVITTPPVQAGQDKYNQ---DVFVANS 455
Query: 272 LIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEED-------------SNDRTITMTGT 317
IG+VIGKGG I IR+ S ++I E D +N R +T+TG+
Sbjct: 456 SIGSVIGKGGNNIKHIRETSACTYVKI------EPDKGQSMMLGGGKGMTNIRKLTLTGS 509
Query: 318 PDAIALAQYLINMSVELLR 336
++I A YLIN + R
Sbjct: 510 LNSIQTAIYLINQRINADR 528
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
IQLR+ P + +I+G+ G I +RE + + V S+ L ER V +KG + V
Sbjct: 159 FIQLRMYCPVKEASTIVGRKGETINHLREKANVRITV-SENLKGVPERIVAVKGPAENVA 217
Query: 139 QAIYQICLIMVDSP 152
+A I ++++ P
Sbjct: 218 RAFGLITRVILEEP 231
>gi|170586586|ref|XP_001898060.1| KH domain containing protein [Brugia malayi]
gi|158594455|gb|EDP33039.1| KH domain containing protein [Brugia malayi]
Length = 451
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 149/305 (48%), Gaps = 37/305 (12%)
Query: 30 ISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPAS 89
+ DS TPER++T+ + +++ I ++E ++ + + +++++V S
Sbjct: 169 VPDSQTPERVLTLTATTENIANCLREIIPRLDENREDDHDRRMKKADRSDSEMKVLVHES 228
Query: 90 QCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV 149
G++IG+GGS+IK +RE +GA + V S P STER V + G + + I I ++
Sbjct: 229 HAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTERIVLLNGEVEKIIDCINIIIDVLK 288
Query: 150 DSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 209
+ P KG PY P+ + P +I + G PD ++ +G G + G
Sbjct: 289 EIPIKGPVRPYDPMYYD---PDIISDYGGY------VPDRNF-----ISRVGRGRDFG-- 332
Query: 210 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG--PSQKTNQQQNQITKEMT 267
SS + + P ++ + R P+ +T Q + T ++T
Sbjct: 333 -------------FSSGIIPSRYPGRDDRYGGMRDMMGRYSPIPAMQTTQVE---TTDVT 376
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
+P+EL GA+IGKGG++I +R+ SGA I + ++ DR IT++GT + I AQYL
Sbjct: 377 IPDELGGAIIGKGGSRINRVREESGAQIEVEP---HRDNGGDRIITISGTREQIQAAQYL 433
Query: 328 INMSV 332
+ V
Sbjct: 434 LQQCV 438
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 149/305 (48%), Gaps = 37/305 (12%)
Query: 475 ISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPAS 534
+ DS TPER++T+ + +++ I ++E ++ + + +++++V S
Sbjct: 169 VPDSQTPERVLTLTATTENIANCLREIIPRLDENREDDHDRRMKKADRSDSEMKVLVHES 228
Query: 535 QCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV 594
G++IG+GGS+IK +RE +GA + V S P STER V + G + + I I ++
Sbjct: 229 HAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTERIVLLNGEVEKIIDCINIIIDVLK 288
Query: 595 DSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGG 654
+ P KG PY P+ + P +I + G PD ++ +G G + G
Sbjct: 289 EIPIKGPVRPYDPMYYD---PDIISDYGGY------VPDRNF-----ISRVGRGRDFG-- 332
Query: 655 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG--PSQKTNQQQNQITKEMT 712
SS + + P ++ + R P+ +T Q + T ++T
Sbjct: 333 -------------FSSGIIPSRYPGRDDRYGGMRDMMGRYSPIPAMQTTQVE---TTDVT 376
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 772
+P+EL GA+IGKGG++I +R+ SGA I + ++ DR IT++GT + I AQYL
Sbjct: 377 IPDELGGAIIGKGGSRINRVREESGAQIEVEP---HRDNGGDRIITISGTREQIQAAQYL 433
Query: 773 INMSV 777
+ V
Sbjct: 434 LQQCV 438
>gi|390597786|gb|EIN07185.1| hypothetical protein PUNSTDRAFT_53562 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 356
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 100/158 (63%), Gaps = 6/158 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK G V ++R++SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 55 HMRCLIVTQDASIIIGKGGAHVNEIRQKSGARVVVSESIPGNPERILNVSGPLDAVSKAF 114
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I + + G S+ + ++ ++P S+ GS+IGKGGS+IK I+E SGA +
Sbjct: 115 GLIVRRINDEPFDSASVPG----SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGARL 170
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
+ MLP STER +++ GV DA+ A Y I I++++
Sbjct: 171 NASEGMLPGSTERVLSVSGVADAIHIATYYIGNILIEA 208
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 94/145 (64%), Gaps = 6/145 (4%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++R++SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 68 IIGKGGAHVNEIRQKSGARVVVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 127
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGKGGS+IK I+E SGA + + MLP STER
Sbjct: 128 SASVPG----SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGARLNASEGMLPGSTER 183
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDS 151
+++ GV DA+ A Y I I++++
Sbjct: 184 VLSVSGVADAIHIATYYIGNILIEA 208
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGKGG+ + IR+ SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 54 IHMRCLIVTQDASIIIGKGGAHVNEIRQKSGARV-VVSESIPGNPERILNVSGPLDAVSK 112
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
A I + D P A++P G + +F + NS MG+
Sbjct: 113 AFGLIVRRINDEPFDSASVP---------GSRAVTIKFMIPNSRMGS 150
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIGKGG+KI EI++ SGA R++ S S +R ++++G DAI
Sbjct: 137 VTIKFMIPNSRMGSVIGKGGSKIKEIQEASGA--RLNASEGMLPGSTERVLSVSGVADAI 194
Query: 322 ALAQYLI-NMSVE 333
+A Y I N+ +E
Sbjct: 195 HIATYYIGNILIE 207
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G+VIGKGG+KI EI++ SGA R++ S S +R ++++G DAI
Sbjct: 137 VTIKFMIPNSRMGSVIGKGGSKIKEIQEASGA--RLNASEGMLPGSTERVLSVSGVADAI 194
Query: 767 ALAQYLI-NMSVE 778
+A Y I N+ +E
Sbjct: 195 HIATYYIGNILIE 207
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE---------DSNDRTIT 313
T+++ +PN+L+G +IGKGG KI EIR +S + I+I + + N+R +
Sbjct: 262 TQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGATGQAGADGAPAGSENERLVV 321
Query: 314 MTGTPDAIALAQYLINMSVELLRANLNGE 342
+TG P I M+V+LL + L E
Sbjct: 322 ITGAPAN-------IQMAVQLLYSRLEQE 343
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE---------DSNDRTIT 758
T+++ +PN+L+G +IGKGG KI EIR +S + I+I + + N+R +
Sbjct: 262 TQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGATGQAGADGAPAGSENERLVV 321
Query: 759 MTGTPDAIALAQYLINMSVELLRANLNGE 787
+TG P I M+V+LL + L E
Sbjct: 322 ITGAPAN-------IQMAVQLLYSRLEQE 343
>gi|409045569|gb|EKM55049.1| hypothetical protein PHACADRAFT_95060 [Phanerochaete carnosa
HHB-10118-sp]
Length = 409
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 103/160 (64%), Gaps = 10/160 (6%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK+G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 111 HMRCLIVTQDASIIIGKAGTHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAF 170
Query: 499 SLITKNI--EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI + I E F K + G S+ + ++ ++P S+ GS+IGKGG++IK I++ SGA
Sbjct: 171 GLIVRRINDEPFDK---PSVPG---SRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGA 224
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
+ + MLP STER +++ GV DA+ A Y I I++++
Sbjct: 225 RLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNILIEA 264
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 97/147 (65%), Gaps = 10/147 (6%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNI--EEFH 64
IIGK+G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I E F
Sbjct: 124 IIGKAGTHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 183
Query: 65 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 124
K + G S+ + ++ ++P S+ GS+IGKGG++IK I++ SGA + + MLP ST
Sbjct: 184 K---PSVPG---SRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGST 237
Query: 125 EREVNIKGVPDAVTQAIYQICLIMVDS 151
ER +++ GV DA+ A Y I I++++
Sbjct: 238 ERVLSVSGVADAIHIATYYIGNILIEA 264
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 131/320 (40%), Gaps = 87/320 (27%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGK G+ + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 110 IHMRCLIVTQDASIIIGKAGTHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSK 168
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 199
A I + D P ++P G + +F + NS MG +
Sbjct: 169 AFGLIVRRINDEPFDKPSVP---------GSRAVTIKFMIPNSRMG------------SV 207
Query: 200 LGLGG--------------NSGGGMGGGLNAAALAA--------LASSQL------KTNH 231
+G GG N+ GM G L+ +A+ +
Sbjct: 208 IGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNILIEANER 267
Query: 232 MPRNQNQNQNQHNRNNRDGPSQKTNQ------------------QQNQITKEMTVPNELI 273
MP QN + + + P Q ++ Q Q T+++ +PN+L+
Sbjct: 268 MPSYQNSSYRPSSTSRSRAPYQGSSYVPIGHASALLQPHAPPPGAQLQ-TQQIYIPNDLV 326
Query: 274 GAVIGKGGTKIFEIRKISGAMIRI-----------SKSSEEEEDSNDRTITMTGTPDAIA 322
G +IGKGG+KI EIR +S + I+I + + +R + +TG P+ I
Sbjct: 327 GCIIGKGGSKINEIRHVSASQIKIMEPGAVGVGMNGQPAPAAAHEGERLVVITGAPNNIQ 386
Query: 323 LAQYLINMSVELLRANLNGE 342
+A V+LL + L E
Sbjct: 387 IA-------VQLLYSRLEQE 399
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 131/320 (40%), Gaps = 87/320 (27%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I +R ++ IIGK G+ + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 110 IHMRCLIVTQDASIIIGKAGTHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSK 168
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 644
A I + D P ++P G + +F + NS MG+
Sbjct: 169 AFGLIVRRINDEPFDKPSVP---------GSRAVTIKFMIPNSRMGS------------V 207
Query: 645 LGLGG--------------NSGGGMGGGLNAAALAA--------LASSQL------KTNH 676
+G GG N+ GM G L+ +A+ +
Sbjct: 208 IGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNILIEANER 267
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQ------------------QQNQITKEMTVPNELI 718
MP QN + + + P Q ++ Q Q T+++ +PN+L+
Sbjct: 268 MPSYQNSSYRPSSTSRSRAPYQGSSYVPIGHASALLQPHAPPPGAQLQ-TQQIYIPNDLV 326
Query: 719 GAVIGKGGTKIFEIRKISGAMIRI-----------SKSSEEEEDSNDRTITMTGTPDAIA 767
G +IGKGG+KI EIR +S + I+I + + +R + +TG P+ I
Sbjct: 327 GCIIGKGGSKINEIRHVSASQIKIMEPGAVGVGMNGQPAPAAAHEGERLVVITGAPNNIQ 386
Query: 768 LAQYLINMSVELLRANLNGE 787
+A V+LL + L E
Sbjct: 387 IA-------VQLLYSRLEQE 399
>gi|302692864|ref|XP_003036111.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
gi|300109807|gb|EFJ01209.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
Length = 282
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 106/171 (61%), Gaps = 9/171 (5%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
MR ++ ++ IIG++G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 4 MRCLIVTQDASIIIGRAGAHVNEIREKSGARVVVSESIPGNPERILNVSGPLDAVSKAFG 63
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + I + + G S+ + ++ ++P S+ GS+IGKGGS+IK I++ SGA +
Sbjct: 64 LIVRRINDEPFDVPSLPG----SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLN 119
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRP 607
+ MLP STER +++ GV DA+ A Y + I++++ P A YRP
Sbjct: 120 ASEGMLPGSTERVLSVAGVADAIHIATYYVGNILIEAQERMPSTANASYRP 170
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 100/159 (62%), Gaps = 9/159 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIG++G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 16 IIGRAGAHVNEIREKSGARVVVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 75
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGKGGS+IK I++ SGA + + MLP STER
Sbjct: 76 VPSLPG----SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTER 131
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRP 162
+++ GV DA+ A Y + I++++ P A YRP
Sbjct: 132 VLSVAGVADAIHIATYYVGNILIEAQERMPSTANASYRP 170
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 40/282 (14%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I +R ++ IIG+ G+ + IRE SGA V V S+ +P + ER +N+ G DAV+
Sbjct: 1 MIHMRCLIVTQDASIIIGRAGAHVNEIREKSGARV-VVSESIPGNPERILNVSGPLDAVS 59
Query: 139 QAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAGL 197
+A I + D P ++P G + +F + NS MG+ G + + +
Sbjct: 60 KAFGLIVRRINDEPFDVPSLP---------GSRAVTIKFMIPNSRMGSVIGKGGSKIKEI 110
Query: 198 A-ALGLGGNSGGGM--GGGLNAAALAALASS-QLKTNH-----------MPRNQNQNQNQ 242
A G N+ GM G ++A +A + + T + MP N +
Sbjct: 111 QDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYVGNILIEAQERMPSTANASYRP 170
Query: 243 HNRNNR---DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
N R + P + Q T+++ +PN+L+G +IGKGG+KI EIR +S + I+I +
Sbjct: 171 GNPTRRPITNAPYPGSTYVQ---TQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIME 227
Query: 300 SSEEEE--------DSNDRTITMTGTPDAIALAQYLINMSVE 333
+R + +TG P I +A ++ +E
Sbjct: 228 PGAVATGMPAGAAGSEGERLVVITGQPANIQMAVQMLYHRLE 269
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 40/282 (14%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I +R ++ IIG+ G+ + IRE SGA V V S+ +P + ER +N+ G DAV+
Sbjct: 1 MIHMRCLIVTQDASIIIGRAGAHVNEIREKSGARV-VVSESIPGNPERILNVSGPLDAVS 59
Query: 584 QAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAGL 642
+A I + D P ++P G + +F + NS MG+ G + + +
Sbjct: 60 KAFGLIVRRINDEPFDVPSLP---------GSRAVTIKFMIPNSRMGSVIGKGGSKIKEI 110
Query: 643 A-ALGLGGNSGGGM--GGGLNAAALAALASS-QLKTNH-----------MPRNQNQNQNQ 687
A G N+ GM G ++A +A + + T + MP N +
Sbjct: 111 QDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYVGNILIEAQERMPSTANASYRP 170
Query: 688 HNRNNR---DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
N R + P + Q T+++ +PN+L+G +IGKGG+KI EIR +S + I+I +
Sbjct: 171 GNPTRRPITNAPYPGSTYVQ---TQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIME 227
Query: 745 SSEEEE--------DSNDRTITMTGTPDAIALAQYLINMSVE 778
+R + +TG P I +A ++ +E
Sbjct: 228 PGAVATGMPAGAAGSEGERLVVITGQPANIQMAVQMLYHRLE 269
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 20/139 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSL---- 494
++ ++ +GS+IGK G +K++++ SG+++ S+ P ER+++V G D++
Sbjct: 87 IKFMIPNSRMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIAT 146
Query: 495 FRAFSLITKNIEEFHKNQN-KHLGGN------------GESQLIQLRLIVPASQCGSIIG 541
+ +++ + E N + GN G + + ++ +P G IIG
Sbjct: 147 YYVGNILIEAQERMPSTANASYRPGNPTRRPITNAPYPGSTYVQTQQIYIPNDLVGCIIG 206
Query: 542 KGGSQIKTIRETSGASVYV 560
KGGS+I IR S + + +
Sbjct: 207 KGGSKINEIRHMSASQIKI 225
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 20/131 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSL----FRAFSLIT 57
+GS+IGK G +K++++ SG+++ S+ P ER+++V G D++ + +++
Sbjct: 95 RMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYVGNILI 154
Query: 58 KNIEEFHKNQN-KHLGGN------------GESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
+ E N + GN G + + ++ +P G IIGKGGS+I
Sbjct: 155 EAQERMPSTANASYRPGNPTRRPITNAPYPGSTYVQTQQIYIPNDLVGCIIGKGGSKINE 214
Query: 105 IRETSGASVYV 115
IR S + + +
Sbjct: 215 IRHMSASQIKI 225
>gi|195161145|ref|XP_002021430.1| GL24805 [Drosophila persimilis]
gi|194118543|gb|EDW40586.1| GL24805 [Drosophila persimilis]
Length = 180
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 80/129 (62%), Gaps = 24/129 (18%)
Query: 212 GGLN-AAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 270
GG+N A LAALA SQL+T N NR QQQ EMTV +
Sbjct: 56 GGINHTAGLAALAGSQLRT----------ANAANRA----------QQQRH---EMTVSD 92
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
+LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM
Sbjct: 93 DLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINM 152
Query: 331 SVELLRANL 339
+ + A L
Sbjct: 153 RISMETAGL 161
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 80/129 (62%), Gaps = 24/129 (18%)
Query: 657 GGLN-AAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
GG+N A LAALA SQL+T N NR QQQ EMTV +
Sbjct: 56 GGINHTAGLAALAGSQLRT----------ANAANRA----------QQQRH---EMTVSD 92
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
+LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT++G PD++ALAQYLINM
Sbjct: 93 DLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINM 152
Query: 776 SVELLRANL 784
+ + A L
Sbjct: 153 RISMETAGL 161
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 92 GSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
G IIGKGG++I IR+ SGA + + + +T+R + I G PD+V A Y I
Sbjct: 96 GCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI 150
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 537 GSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
G IIGKGG++I IR+ SGA + + + +T+R + I G PD+V A Y I
Sbjct: 96 GCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLI 150
>gi|340914749|gb|EGS18090.1| putative pab1-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 484
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 99/166 (59%), Gaps = 12/166 (7%)
Query: 428 PNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIV 485
P A+ +T+ + +R ++ E +IIGK GE V K+R+ SG++ +SD ERI+
Sbjct: 115 PPAAHDETSWIH--IRAVISSPEAATIIGKGGENVTKIRQMSGARCTVSDYQKGAVERIL 172
Query: 486 TVIGSMDSLFRAFSLITKNI--EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
TV G +D++ +AF LI + + E ++ N+H S+ LRL++P GSIIGKG
Sbjct: 173 TVSGIVDAVAKAFGLIIRTLNNEPLNEPSNQH------SKTYPLRLLIPHVLIGSIIGKG 226
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
G++IK I+E SGA + + LP STER + + GV DAV A Y +
Sbjct: 227 GARIKEIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATYYV 272
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 10/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI-- 60
E +IIGK GE V K+R+ SG++ +SD ERI+TV G +D++ +AF LI + +
Sbjct: 135 EAATIIGKGGENVTKIRQMSGARCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTLNN 194
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E ++ N+H S+ LRL++P GSIIGKGG++IK I+E SGA + + L
Sbjct: 195 EPLNEPSNQH------SKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDSCL 248
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
P STER + + GV DAV A Y +
Sbjct: 249 PLSTERSLVVMGVADAVHIATYYV 272
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 410 ITQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 466
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 467 RMALYMLYSRLE 478
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 410 ITQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 466
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 467 RMALYMLYSRLE 478
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
+ +NQ + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++
Sbjct: 199 EPSNQHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERSL 256
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ G DA+ +A Y + + L LN GG
Sbjct: 257 VVMGVADAVHIATYYVGST---LLEQLNERFGG 286
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
+ +NQ + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++
Sbjct: 199 EPSNQHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERSL 256
Query: 758 TMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ G DA+ +A Y + + L LN GG
Sbjct: 257 VVMGVADAVHIATYYVGST---LLEQLNERFGG 286
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
+ E+ I +R ++ + + +IIGKGG + IR+ SGA V SD + ER + +
Sbjct: 117 AAHDETSWIHIRAVISSPEAATIIGKGGENVTKIRQMSGARCTV-SDYQKGAVERILTVS 175
Query: 132 GVPDAVTQAIYQICLIMVDSP 152
G+ DAV +A I + + P
Sbjct: 176 GIVDAVAKAFGLIIRTLNNEP 196
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 64 HKNQNKHLGGNGES--------QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
H + H+G +G+ Q I ++ +P G+IIGKGG +I IR+ SG SV
Sbjct: 386 HPAAHPHVGPHGQPVAGAHMPGQTITQQIYIPNDMVGAIIGKGGQKINEIRQISG-SVIK 444
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
++ NS ER V I G + A+Y +
Sbjct: 445 INEPQDNSNERLVTITGTEECNRMALYML 473
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 509 HKNQNKHLGGNGES--------QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
H + H+G +G+ Q I ++ +P G+IIGKGG +I IR+ SG SV
Sbjct: 386 HPAAHPHVGPHGQPVAGAHMPGQTITQQIYIPNDMVGAIIGKGGQKINEIRQISG-SVIK 444
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
++ NS ER V I G + A+Y +
Sbjct: 445 INEPQDNSNERLVTITGTEECNRMALYML 473
>gi|171687621|ref|XP_001908751.1| hypothetical protein [Podospora anserina S mat+]
gi|170943772|emb|CAP69424.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 90/153 (58%), Gaps = 10/153 (6%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V K+R+ SG+K +SD ERI+TV G +D+ +AF
Sbjct: 136 HIRAVISSPEAATIIGKGGENVSKIRQSSGAKCTVSDYQKGAVERILTVSGVVDAAAKAF 195
Query: 499 SLI--TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI T N E + N+H S+ LRL++P GSIIGKGGS+IK I+E SGA
Sbjct: 196 GLIIRTLNNEPLSEPSNQH------SKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEASGA 249
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ + LP S+ER + + GV DAV A Y +
Sbjct: 250 RLNASDSCLPASSERSLVVTGVADAVHIATYYV 282
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 86/144 (59%), Gaps = 10/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLI--TKNI 60
E +IIGK GE V K+R+ SG+K +SD ERI+TV G +D+ +AF LI T N
Sbjct: 145 EAATIIGKGGENVSKIRQSSGAKCTVSDYQKGAVERILTVSGVVDAAAKAFGLIIRTLNN 204
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + N+H S+ LRL++P GSIIGKGGS+IK I+E SGA + + L
Sbjct: 205 EPLSEPSNQH------SKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEASGARLNASDSCL 258
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
P S+ER + + GV DAV A Y +
Sbjct: 259 PASSERSLVVTGVADAVHIATYYV 282
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S+ +NQ + +P+ LIG++IGKGG++I EI++ SGA R++ S S++R+
Sbjct: 208 SEPSNQHSKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEASGA--RLNASDSCLPASSERS 265
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ +TG DA+ +A Y + + L LN GG
Sbjct: 266 LVVTGVADAVHIATYYVGST---LLEQLNERFGG 296
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S+ +NQ + +P+ LIG++IGKGG++I EI++ SGA R++ S S++R+
Sbjct: 208 SEPSNQHSKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEASGA--RLNASDSCLPASSERS 265
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ +TG DA+ +A Y + + L LN GG
Sbjct: 266 LVVTGVADAVHIATYYVGST---LLEQLNERFGG 296
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ I +R ++ + + +IIGKGG + IR++SGA V SD + ER + + GV D
Sbjct: 131 ETAWIHIRAVISSPEAATIIGKGGENVSKIRQSSGAKCTV-SDYQKGAVERILTVSGVVD 189
Query: 136 AVTQAIYQICLIMVDSP 152
A +A I + + P
Sbjct: 190 AAAKAFGLIIRTLNNEP 206
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
E+ I +R ++ + + +IIGKGG + IR++SGA V SD + ER + + GV D
Sbjct: 131 ETAWIHIRAVISSPEAATIIGKGGENVSKIRQSSGAKCTV-SDYQKGAVERILTVSGVVD 189
Query: 581 AVTQAIYQICLIMVDSP 597
A +A I + + P
Sbjct: 190 AAAKAFGLIIRTLNNEP 206
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G+IIGKGG +I IR+ SG SV ++ NS ER V I G + A+Y
Sbjct: 429 QIYIPNDMVGAIIGKGGQKINEIRQISG-SVIKINEPQDNSNERLVTITGTDECNKMALY 487
Query: 143 QI 144
+
Sbjct: 488 ML 489
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G+IIGKGG +I IR+ SG SV ++ NS ER V I G + A+Y
Sbjct: 429 QIYIPNDMVGAIIGKGGQKINEIRQISG-SVIKINEPQDNSNERLVTITGTDECNKMALY 487
Query: 588 QI 589
+
Sbjct: 488 ML 489
>gi|367019960|ref|XP_003659265.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
gi|347006532|gb|AEO54020.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
Length = 482
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 106/181 (58%), Gaps = 16/181 (8%)
Query: 414 GSGNSG-GFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSK 472
SGN+ G G P G A+ +T+ + +R ++ E +IIGK GE V K+R+ SG+K
Sbjct: 101 ASGNAAQGQSGPPPG---AHDETSWIH--VRAVISSPEAATIIGKGGENVSKIRQMSGAK 155
Query: 473 IYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI--EEFHKNQNKHLGGNGESQLIQLR 528
+SD ERI+TV G +D++ +AF LI + + E ++ ++H S+ LR
Sbjct: 156 CTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTLNNEPLNEPSSQH------SKTYPLR 209
Query: 529 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQ 588
L++P GSIIGKGG++IK I+E SGA + + LP STER + + GV DAV A Y
Sbjct: 210 LLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATYY 269
Query: 589 I 589
+
Sbjct: 270 V 270
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 10/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI-- 60
E +IIGK GE V K+R+ SG+K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 133 EAATIIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTLNN 192
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E ++ ++H S+ LRL++P GSIIGKGG++IK I+E SGA + + L
Sbjct: 193 EPLNEPSSQH------SKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCL 246
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
P STER + + GV DAV A Y +
Sbjct: 247 PLSTERSLVVMGVADAVHIATYYV 270
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 408 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 464
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 465 RMALYMLYSRLE 476
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 408 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 464
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 465 RMALYMLYSRLE 476
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
G + E+ I +R ++ + + +IIGKGG + IR+ SGA V SD + ER + +
Sbjct: 115 GAHDETSWIHVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTV-SDYQKGAVERILTVS 173
Query: 132 GVPDAVTQAIYQICLIMVDSP 152
G+ DAV +A I + + P
Sbjct: 174 GIVDAVAKAFGLIIRTLNNEP 194
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
+ ++Q + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++
Sbjct: 197 EPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERSL 254
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ G DA+ +A Y + + L LN GG
Sbjct: 255 VVMGVADAVHIATYYVGST---LLEQLNERFGG 284
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
+ ++Q + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++
Sbjct: 197 EPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERSL 254
Query: 758 TMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ G DA+ +A Y + + L LN GG
Sbjct: 255 VVMGVADAVHIATYYVGST---LLEQLNERFGG 284
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G+IIGKGG +I IR+ SG SV ++ NS ER V I G + A+Y
Sbjct: 411 QIYIPNDMVGAIIGKGGQKINEIRQISG-SVIKINEPQDNSNERLVTITGTEECNRMALY 469
Query: 143 QI 144
+
Sbjct: 470 ML 471
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G+IIGKGG +I IR+ SG SV ++ NS ER V I G + A+Y
Sbjct: 411 QIYIPNDMVGAIIGKGGQKINEIRQISG-SVIKINEPQDNSNERLVTITGTEECNRMALY 469
Query: 588 QI 589
+
Sbjct: 470 ML 471
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 97/166 (58%), Gaps = 8/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K GSIIGK G+ + KLR + + I + D PER++T+ + ++ + + +
Sbjct: 77 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTISSDLPTVLQVLNEV 136
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
N+EE N ++H G+ E I +R++V SQ G IIGKGG +IK +RE +GA + +
Sbjct: 137 VPNLEE---NGSRH--GSDE---IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIY 188
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
S P+ST+R ++I G P+ + I ++ + SP KG PY P
Sbjct: 189 SHCCPHSTDRLISICGKPNTCIECIRELIATIKTSPLKGVNNPYDP 234
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 8/159 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K GSIIGK G+ + KLR + + I + D PER++T+ + ++ + + + N+EE
Sbjct: 84 KVAGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTISSDLPTVLQVLNEVVPNLEE- 142
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
N ++H G+ E I +R++V SQ G IIGKGG +IK +RE +GA + + S P+S
Sbjct: 143 --NGSRH--GSDE---IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHS 195
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
T+R ++I G P+ + I ++ + SP KG PY P
Sbjct: 196 TDRLISICGKPNTCIECIRELIATIKTSPLKGVNNPYDP 234
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+ T ++T+P +L GA+IGKGG +I ++R SGA I I E SNDR IT+TG P
Sbjct: 364 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI---DEPLSGSNDRIITITGLPSQ 420
Query: 321 IALAQYLINMSVE 333
I +AQYL+ SV
Sbjct: 421 IQMAQYLLQQSVH 433
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
+ T ++T+P +L GA+IGKGG +I ++R SGA I I E SNDR IT+TG P
Sbjct: 364 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI---DEPLSGSNDRIITITGLPSQ 420
Query: 766 IALAQYLINMSVE 778
I +AQYL+ SV
Sbjct: 421 IQMAQYLLQQSVH 433
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
++I M V G +IGKGG KI E+R+ +GA I+I S S DR I++ G P
Sbjct: 150 DEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKI--YSHCCPHSTDRLISICGKP- 206
Query: 320 AIALAQYLINMSVELLR 336
N +E +R
Sbjct: 207 ---------NTCIECIR 214
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G+IIGKGG++I+ +R SGA + + + L S +R + I G+P + A Y
Sbjct: 368 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-DEPLSGSNDRIITITGLPSQIQMAQY 426
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G+IIGKGG++I+ +R SGA + + + L S +R + I G+P + A Y
Sbjct: 368 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-DEPLSGSNDRIITITGLPSQIQMAQY 426
>gi|367043886|ref|XP_003652323.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
gi|346999585|gb|AEO65987.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
Length = 482
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 92/153 (60%), Gaps = 10/153 (6%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V K+R+ SG+K +SD ERI+TV G +D++ +AF
Sbjct: 124 HIRAVISSPEAATVIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGIVDAVAKAF 183
Query: 499 SLITKNI--EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI + + E ++ N+H S+ LRL++P GSIIGKGG++IK I+E SGA
Sbjct: 184 GLIIRTLNNEPLNEPSNQH------SKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA 237
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ + LP STER + + GV DAV A Y +
Sbjct: 238 RLNASDSCLPLSTERSLVVMGVADAVHIATYYV 270
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 10/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI-- 60
E ++IGK GE V K+R+ SG+K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 133 EAATVIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTLNN 192
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E ++ N+H S+ LRL++P GSIIGKGG++IK I+E SGA + + L
Sbjct: 193 EPLNEPSNQH------SKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCL 246
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
P STER + + GV DAV A Y +
Sbjct: 247 PLSTERSLVVMGVADAVHIATYYV 270
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 408 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 464
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 465 RIALYMLYSRLE 476
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 408 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 464
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 465 RIALYMLYSRLE 476
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
+ +NQ + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++
Sbjct: 197 EPSNQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERSL 254
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ G DA+ +A Y + + L LN GG
Sbjct: 255 VVMGVADAVHIATYYVGST---LLEQLNERFGG 284
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
+ +NQ + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++
Sbjct: 197 EPSNQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERSL 254
Query: 758 TMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ G DA+ +A Y + + L LN GG
Sbjct: 255 VVMGVADAVHIATYYVGST---LLEQLNERFGG 284
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E+ I +R ++ + + ++IGKGG + IR+ SGA V SD + ER + + G+
Sbjct: 117 HDETAWIHIRAVISSPEAATVIGKGGENVSKIRQMSGAKCTV-SDYQKGAVERILTVSGI 175
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 176 VDAVAKAFGLIIRTLNNEP 194
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ E+ I +R ++ + + ++IGKGG + IR+ SGA V SD + ER + + G+
Sbjct: 117 HDETAWIHIRAVISSPEAATVIGKGGENVSKIRQMSGAKCTV-SDYQKGAVERILTVSGI 175
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 176 VDAVAKAFGLIIRTLNNEP 194
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 160/354 (45%), Gaps = 57/354 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 43 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 102
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 103 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 162
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT--I 603
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P + I
Sbjct: 163 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNI 220
Query: 604 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
Y N GP N G + + AA GL G +G G G AA
Sbjct: 221 SY----ANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAGLA-GVGAFPAA 275
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 723
L A + + L + E+ VP L+GA++G
Sbjct: 276 LPAFSGTDLAKELV--------------------------------EIAVPENLVGAILG 303
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
KGG + E ++++GA I+ISK E + +R +T+TG+P A AQYLI+ V
Sbjct: 304 KGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 357
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 156/344 (45%), Gaps = 57/344 (16%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 53 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 112
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 113 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 172
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT--IPYRPLPQNAG 168
++ P N ER V + G P+ V +A+ I + + P + I Y N
Sbjct: 173 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISY----ANVA 226
Query: 169 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
GP N G + + AA GL G +G G G AAL A + + L
Sbjct: 227 GPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAGLA-GVGAFPAALPAFSGTDLA 285
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
+ E+ VP L+GA++GKGG + E +
Sbjct: 286 KELV--------------------------------EIAVPENLVGAILGKGGKTLVEYQ 313
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+++GA I+ISK E + +R +T+TG+P A AQYLI+ V
Sbjct: 314 ELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 357
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 93/267 (34%)
Query: 246 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 305
++RDG ++ + ++ +P+ G++IGKGG I +++K +GA I++SKS +
Sbjct: 32 SDRDG-------EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--- 81
Query: 306 DSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA 365
GT + + L Q G E+
Sbjct: 82 -------FYPGTTERVCLVQ-----------------GTAEA------------------ 99
Query: 366 GLNASNP-LAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGV 424
LNA + +A + ++ Q +TKP +N L + +
Sbjct: 100 -LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMN------------------------ 134
Query: 425 PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----ST 480
P+ A ++ + I+ G IIGK G TVK + E+SG+ + +S +
Sbjct: 135 ---PDRA--------KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINL 183
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEE 507
ER+VTV G + + +A S I + ++E
Sbjct: 184 QERVVTVSGEPEQVHKAVSAIVQKVQE 210
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
+GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 35 DGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 94
Query: 132 GVPDAVTQAIYQICLIMVDSPPKGATIP 159
G +A+ A++ V P+ T P
Sbjct: 95 GTAEALN-AVHSFIAEKVREIPQAMTKP 121
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
+GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 35 DGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 94
Query: 577 GVPDAVTQAIYQICLIMVDSPPKGATIP 604
G +A+ A++ V P+ T P
Sbjct: 95 GTAEALN-AVHSFIAEKVREIPQAMTKP 121
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 691 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 750
++RDG ++ + ++ +P+ G++IGKGG I +++K +GA I++SKS +
Sbjct: 32 SDRDG-------EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 84
Query: 751 DSNDRTITMTGTPDAIALAQYLINMSV 777
+ +R + GT +A+ I V
Sbjct: 85 GTTERVCLVQGTAEALNAVHSFIAEKV 111
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 43/250 (17%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ VPN G +IGKGG + + + SGA +++S+ E + +R +T++G P+ + A
Sbjct: 142 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-EGINLQERVVTVSGEPEQVHKA 200
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
I V+ E S+ + S N + P+A SNP + A +L
Sbjct: 201 VSAIVQKVQ--------EDPQSSSCLNISYAN---VAGPVAN---SNPTGSPYASPADVL 246
Query: 385 TKPGALNALTSLSALG--GLSDLLGGGSSGGGSGNSGGFGGVPQG-PNYANIQTTGVQRR 441
A +A + LG GL+ G G P P ++ T + +
Sbjct: 247 PAAAAASAAAASGLLGPAGLA----------------GVGAFPAALPAFSG---TDLAKE 287
Query: 442 MRHIMQGKE-VGSIIGKSGETVKKLREESGSKIYISDS-----STPERIVTVIGSMDSLF 495
+ I + VG+I+GK G+T+ + +E +G++I IS T R VT+ GS +
Sbjct: 288 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQ 347
Query: 496 RAFSLITKNI 505
A LI++ +
Sbjct: 348 AAQYLISQRV 357
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 97/166 (58%), Gaps = 8/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K GSIIGK G+ + KLR + + I + D PER++T+ + ++ + + +
Sbjct: 63 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTISSDLPTVLQVLNEV 122
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
N+EE N ++H G+ E I +R++V SQ G IIGKGG +IK +RE +GA + +
Sbjct: 123 VPNLEE---NGSRH--GSDE---IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIY 174
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
S P+ST+R ++I G P+ + I ++ + SP KG PY P
Sbjct: 175 SHCCPHSTDRLISICGKPNTCIECIRELIATIKTSPLKGVNNPYDP 220
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 8/159 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K GSIIGK G+ + KLR + + I + D PER++T+ + ++ + + + N+EE
Sbjct: 70 KVAGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTISSDLPTVLQVLNEVVPNLEE- 128
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
N ++H G+ E I +R++V SQ G IIGKGG +IK +RE +GA + + S P+S
Sbjct: 129 --NGSRH--GSDE---IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHS 181
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
T+R ++I G P+ + I ++ + SP KG PY P
Sbjct: 182 TDRLISICGKPNTCIECIRELIATIKTSPLKGVNNPYDP 220
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+ T ++T+P +L GA+IGKGG +I ++R SGA I I E SNDR IT+TG P
Sbjct: 391 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI---DEPLSGSNDRIITITGLPSQ 447
Query: 321 IALAQYLINMSVE 333
I +AQYL+ SV
Sbjct: 448 IQMAQYLLQQSVH 460
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
+ T ++T+P +L GA+IGKGG +I ++R SGA I I E SNDR IT+TG P
Sbjct: 391 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI---DEPLSGSNDRIITITGLPSQ 447
Query: 766 IALAQYLINMSVE 778
I +AQYL+ SV
Sbjct: 448 IQMAQYLLQQSVH 460
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G+IIGKGG++I+ +R SGA + + + L S +R + I G+P + A Y
Sbjct: 395 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-DEPLSGSNDRIITITGLPSQIQMAQY 453
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G+IIGKGG++I+ +R SGA + + + L S +R + I G+P + A Y
Sbjct: 395 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-DEPLSGSNDRIITITGLPSQIQMAQY 453
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 8/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K GSIIGK G+ + KLR + + I + D PER++T+ + ++ + + +
Sbjct: 49 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTISSDLPTVLQVLNEV 108
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
N+EE N ++H G+ E I +R++V SQ G IIGKGG +IK +RE +GA + +
Sbjct: 109 VPNLEE---NGSRH--GSDE---IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIY 160
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
S P+ST+R ++I G P I ++ + SP KG PY P
Sbjct: 161 SHCCPHSTDRLISICGKPSTCIDCIRELIATIKTSPLKGMNNPYDP 206
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 8/159 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K GSIIGK G+ + KLR + + I + D PER++T+ + ++ + + + N+EE
Sbjct: 56 KVAGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTISSDLPTVLQVLNEVVPNLEE- 114
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
N ++H G+ E I +R++V SQ G IIGKGG +IK +RE +GA + + S P+S
Sbjct: 115 --NGSRH--GSDE---IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHS 167
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
T+R ++I G P I ++ + SP KG PY P
Sbjct: 168 TDRLISICGKPSTCIDCIRELIATIKTSPLKGMNNPYDP 206
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
N N+ + ++T+P +L GA+IGKGG +I +IR SGA I I E SNDR IT+T
Sbjct: 380 NMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITI---DEPLPGSNDRIITIT 436
Query: 316 GTPDAIALAQYLINMSVE 333
G P I +AQYL+ SV
Sbjct: 437 GLPSQIQMAQYLLQQSVH 454
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 760
N N+ + ++T+P +L GA+IGKGG +I +IR SGA I I E SNDR IT+T
Sbjct: 380 NMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITI---DEPLPGSNDRIITIT 436
Query: 761 GTPDAIALAQYLINMSVE 778
G P I +AQYL+ SV
Sbjct: 437 GLPSQIQMAQYLLQQSVH 454
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 73 GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 132
GN S ++ +P G+IIGKGG++I+ IR SGA + + + LP S +R + I G
Sbjct: 379 GNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITI-DEPLPGSNDRIITITG 437
Query: 133 VPDAVTQAIY 142
+P + A Y
Sbjct: 438 LPSQIQMAQY 447
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 518 GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 577
GN S ++ +P G+IIGKGG++I+ IR SGA + + + LP S +R + I G
Sbjct: 379 GNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITI-DEPLPGSNDRIITITG 437
Query: 578 VPDAVTQAIY 587
+P + A Y
Sbjct: 438 LPSQIQMAQY 447
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
++I M V G +IGKGG KI E+R+ +GA I+I S S DR I++ G P
Sbjct: 122 DEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKI--YSHCCPHSTDRLISICGKPS 179
Query: 320 AI--ALAQYLINMSVELLRANLNGEGGGESNMDDF 352
+ + + + L+ N N DDF
Sbjct: 180 TCIDCIRELIATIKTSPLKGMNNPY--DPHNFDDF 212
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
++I M V G +IGKGG KI E+R+ +GA I+I S S DR I++ G P
Sbjct: 122 DEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKI--YSHCCPHSTDRLISICGKPS 179
Query: 765 AI--ALAQYLINMSVELLRANLNGEGGGESNMDDF 797
+ + + + L+ N N DDF
Sbjct: 180 TCIDCIRELIATIKTSPLKGMNNPY--DPHNFDDF 212
>gi|170087462|ref|XP_001874954.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650154|gb|EDR14395.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 339
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 108/185 (58%), Gaps = 16/185 (8%)
Query: 428 PNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIV 485
P ANI MR ++ ++ IIGK G V ++RE+SG+++ +S+S PERI+
Sbjct: 52 PPSANIH-------MRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERIL 104
Query: 486 TVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 545
V G +D++ +AF LI + I + + G S+ + ++ ++P S+ GS+IGK GS
Sbjct: 105 NVSGPLDAVSKAFGLIVRRINDEPFDVPSVPG----SRAVTIKFMIPNSRMGSVIGKQGS 160
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP---PKGAT 602
+IK I++ SGA + + MLP STER +++ GV DA+ A Y I I++++ P A
Sbjct: 161 KIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPSSAN 220
Query: 603 IPYRP 607
YRP
Sbjct: 221 STYRP 225
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 98/159 (61%), Gaps = 9/159 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 71 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 130
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGK GS+IK I++ SGA + + MLP STER
Sbjct: 131 VPSVPG----SRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTER 186
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRP 162
+++ GV DA+ A Y I I++++ P A YRP
Sbjct: 187 VLSVAGVADAIHIATYYIGNILIEAQERMPSSANSTYRP 225
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 125/280 (44%), Gaps = 36/280 (12%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 57 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSK 115
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP--DMGNNPLAGL 197
A I + D P ++P G + +F + NS MG+ G+
Sbjct: 116 AFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQ 166
Query: 198 AALGLGGNSGGGM--GGGLNAAALAALASS-QLKTNH-----------MPRNQNQNQNQH 243
A G N+ GM G ++A +A + + T + MP + N
Sbjct: 167 DASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPSSANSTYRPS 226
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
+ P Q T+++ +PN+L+G +IGKGG+KI EIR +S + I+I +
Sbjct: 227 RYASNPYPPPHNPPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAV 286
Query: 304 EEDSN----------DRTITMTGTPDAIALAQYLINMSVE 333
N +R + +TG P I +A L+ +E
Sbjct: 287 GVGMNGAPAPAGGEGERLVVITGQPANIQMAVQLLYHRLE 326
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 125/280 (44%), Gaps = 36/280 (12%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV++
Sbjct: 57 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSK 115
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP--DMGNNPLAGL 642
A I + D P ++P G + +F + NS MG+ G+
Sbjct: 116 AFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQ 166
Query: 643 AALGLGGNSGGGM--GGGLNAAALAALASS-QLKTNH-----------MPRNQNQNQNQH 688
A G N+ GM G ++A +A + + T + MP + N
Sbjct: 167 DASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPSSANSTYRPS 226
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
+ P Q T+++ +PN+L+G +IGKGG+KI EIR +S + I+I +
Sbjct: 227 RYASNPYPPPHNPPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAV 286
Query: 749 EEDSN----------DRTITMTGTPDAIALAQYLINMSVE 778
N +R + +TG P I +A L+ +E
Sbjct: 287 GVGMNGAPAPAGGEGERLVVITGQPANIQMAVQLLYHRLE 326
>gi|403417714|emb|CCM04414.1| predicted protein [Fibroporia radiculosa]
Length = 420
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 106/175 (60%), Gaps = 14/175 (8%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK G V ++RE+S +++ +S+S PERI+ V G +D++ +AF
Sbjct: 121 HMRCLIVTQDASIIIGKGGSHVNEIREKSSARVMVSESIPGNPERILNVSGPLDAVSKAF 180
Query: 499 SLITKNI--EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI + I E F K + G S+ + ++ ++P S+ GS+IGKGG++IK I++ SGA
Sbjct: 181 GLIVRRINDEPFDK---PSVPG---SRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGA 234
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS----PPKGATIPYRP 607
+ + MLP STER +++ GV DA+ A Y I I++++ P + YRP
Sbjct: 235 RLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNILIEANERLPSYNNSSYYRP 289
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 100/162 (61%), Gaps = 14/162 (8%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNI--EEFH 64
IIGK G V ++RE+S +++ +S+S PERI+ V G +D++ +AF LI + I E F
Sbjct: 134 IIGKGGSHVNEIREKSSARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 193
Query: 65 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 124
K + G S+ + ++ ++P S+ GS+IGKGG++IK I++ SGA + + MLP ST
Sbjct: 194 K---PSVPG---SRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGST 247
Query: 125 EREVNIKGVPDAVTQAIYQICLIMVDS----PPKGATIPYRP 162
ER +++ GV DA+ A Y I I++++ P + YRP
Sbjct: 248 ERVLSVSGVADAIHIATYYIGNILIEANERLPSYNNSSYYRP 289
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 128/308 (41%), Gaps = 77/308 (25%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGKGGS + IRE S A V V S+ +P + ER +N+ G DAV++
Sbjct: 120 IHMRCLIVTQDASIIIGKGGSHVNEIREKSSARVMV-SESIPGNPERILNVSGPLDAVSK 178
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 199
A I + D P ++P G + +F + NS MG +
Sbjct: 179 AFGLIVRRINDEPFDKPSVP---------GSRAVTIKFMIPNSRMG------------SV 217
Query: 200 LGLGG--------------NSGGGMGGGLNAAALAA--------LASSQL------KTNH 231
+G GG N+ GM G L+ +A+ +
Sbjct: 218 IGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNILIEANER 277
Query: 232 MPRNQNQNQNQHNRNNRDGP----------------SQKTNQQQNQITKEMTVPNELIGA 275
+P N + + + N+R P S QQ Q T+++ +PN+L+G
Sbjct: 278 LPSYNNSSYYRPSSNSRRPPPNGSSYVPGYSNTYPGSSHGPPQQLQ-TQQIYIPNDLVGC 336
Query: 276 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN----------DRTITMTGTPDAIALAQ 325
+IGKGG+KI EIR +S + I+I + N +R + +TG P I +A
Sbjct: 337 IIGKGGSKINEIRHMSASNIKIMEPGAVGVGMNGAPAPAGGEGERLVVITGQPANIQMAV 396
Query: 326 YLINMSVE 333
L+ +E
Sbjct: 397 QLLYHRLE 404
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 128/308 (41%), Gaps = 77/308 (25%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I +R ++ IIGKGGS + IRE S A V V S+ +P + ER +N+ G DAV++
Sbjct: 120 IHMRCLIVTQDASIIIGKGGSHVNEIREKSSARVMV-SESIPGNPERILNVSGPLDAVSK 178
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 644
A I + D P ++P G + +F + NS MG+
Sbjct: 179 AFGLIVRRINDEPFDKPSVP---------GSRAVTIKFMIPNSRMGS------------V 217
Query: 645 LGLGG--------------NSGGGMGGGLNAAALAA--------LASSQL------KTNH 676
+G GG N+ GM G L+ +A+ +
Sbjct: 218 IGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNILIEANER 277
Query: 677 MPRNQNQNQNQHNRNNRDGP----------------SQKTNQQQNQITKEMTVPNELIGA 720
+P N + + + N+R P S QQ Q T+++ +PN+L+G
Sbjct: 278 LPSYNNSSYYRPSSNSRRPPPNGSSYVPGYSNTYPGSSHGPPQQLQ-TQQIYIPNDLVGC 336
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN----------DRTITMTGTPDAIALAQ 770
+IGKGG+KI EIR +S + I+I + N +R + +TG P I +A
Sbjct: 337 IIGKGGSKINEIRHMSASNIKIMEPGAVGVGMNGAPAPAGGEGERLVVITGQPANIQMAV 396
Query: 771 YLINMSVE 778
L+ +E
Sbjct: 397 QLLYHRLE 404
>gi|387915114|gb|AFK11166.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 436
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ S I
Sbjct: 50 LRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSVPDSSGPERILSINADIETIGDILSKI 109
Query: 502 TKNIEE-----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
+EE FH Q + G+ +LR++V SQ GSIIG G +IK +RE++
Sbjct: 110 IPTLEEVRCVHFHHLQESYQHYKGKDFDCELRMLVHQSQAGSIIGVKGVKIKELRESTQT 169
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
++ + + P+ST+R V + G PD V + I I ++ +SP KG PY P
Sbjct: 170 TIKLFQECCPHSTDRVVLLGGKPDRVVECIKIIMGLLSESPVKGRAQPYDP 220
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 5/167 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ S I +
Sbjct: 54 LQSKNAGAVIGKGGKNIKSLRTDYNASVSVPDSSGPERILSINADIETIGDILSKIIPTL 113
Query: 61 EE-----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
EE FH Q + G+ +LR++V SQ GSIIG G +IK +RE++ ++ +
Sbjct: 114 EEVRCVHFHHLQESYQHYKGKDFDCELRMLVHQSQAGSIIGVKGVKIKELRESTQTTIKL 173
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
+ P+ST+R V + G PD V + I I ++ +SP KG PY P
Sbjct: 174 FQECCPHSTDRVVLLGGKPDRVVECIKIIMGLLSESPVKGRAQPYDP 220
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 362 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 418
Query: 322 ALAQYLINMSV 332
AQYL+ S
Sbjct: 419 QNAQYLLQNSC 429
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 362 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 418
Query: 767 ALAQYLINMSV 777
AQYL+ S
Sbjct: 419 QNAQYLLQNSC 429
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 361 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 419
Query: 139 QAIY 142
A Y
Sbjct: 420 NAQY 423
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 361 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 419
Query: 584 QAIY 587
A Y
Sbjct: 420 NAQY 423
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ + F
Sbjct: 374 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSCSSF 432
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ + F
Sbjct: 374 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSCSSF 432
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 96/166 (57%), Gaps = 8/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K GSIIGK G+ + KLR + + I + D PER++T+ + ++ + + +
Sbjct: 84 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTISSDLPTVLQVLNEV 143
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
N+EE N ++H G+ E I +R++V SQ G IIGKGG +IK +RE +GA + +
Sbjct: 144 VPNLEE---NGSRH--GSDE---IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIY 195
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
S P+ST+R ++I G P + I ++ + SP KG PY P
Sbjct: 196 SHCCPHSTDRLISICGKPTTCIECIRELIATIKTSPLKGVNNPYDP 241
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K GSIIGK G+ + KLR + + I + D PER++T+ + ++ + + + N+EE
Sbjct: 91 KVAGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTISSDLPTVLQVLNEVVPNLEE- 149
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
N ++H G+ E I +R++V SQ G IIGKGG +IK +RE +GA + + S P+S
Sbjct: 150 --NGSRH--GSDE---IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHS 202
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
T+R ++I G P + I ++ + SP KG PY P
Sbjct: 203 TDRLISICGKPTTCIECIRELIATIKTSPLKGVNNPYDP 241
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+ T ++T+P +L GA+IGKGG +I ++R SGA I I E SNDR IT+TG P
Sbjct: 407 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI---DEPLSGSNDRIITITGLPSQ 463
Query: 321 IALAQYLINMSVE 333
I +AQYL+ SV
Sbjct: 464 IQMAQYLLQQSVH 476
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
+ T ++T+P +L GA+IGKGG +I ++R SGA I I E SNDR IT+TG P
Sbjct: 407 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI---DEPLSGSNDRIITITGLPSQ 463
Query: 766 IALAQYLINMSVE 778
I +AQYL+ SV
Sbjct: 464 IQMAQYLLQQSVH 476
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G+IIGKGG++I+ +R SGA + + + L S +R + I G+P + A Y
Sbjct: 411 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-DEPLSGSNDRIITITGLPSQIQMAQY 469
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G+IIGKGG++I+ +R SGA + + + L S +R + I G+P + A Y
Sbjct: 411 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-DEPLSGSNDRIITITGLPSQIQMAQY 469
>gi|134079139|emb|CAK45951.1| unnamed protein product [Aspergillus niger]
Length = 421
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAF 168
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGGS+I+ I++ SGA +
Sbjct: 169 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARL 224
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ LP STER + I GV DAV A Y + + +V+
Sbjct: 225 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVE 261
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF LI +
Sbjct: 114 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAFGLIIR 173
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGGS+I+ I++ SGA + +
Sbjct: 174 TL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARLNASDA 229
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 150
LP STER + I GV DAV A Y + + +V+
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVE 261
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N D PS Q + +P+ LIG++IGKGG++I EI+ SGA R++ S
Sbjct: 176 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGA--RLNASDAC 230
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
S +R++ + G DA+ +A Y + ++ VE L G
Sbjct: 231 LPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGG 269
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N D PS Q + +P+ LIG++IGKGG++I EI+ SGA R++ S
Sbjct: 176 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGA--RLNASDAC 230
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S +R++ + G DA+ +A Y + ++ VE L G
Sbjct: 231 LPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGG 269
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 97 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 148
Query: 122 NSTEREVNIKGVPDAVTQAI 141
+ ER + + G DA +A
Sbjct: 149 GAVERILTVSGPQDAAAKAF 168
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 97 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 148
Query: 567 NSTEREVNIKGVPDAVTQAI 586
+ ER + + G DA +A
Sbjct: 149 GAVERILTVSGPQDAAAKAF 168
>gi|317032830|ref|XP_001394456.2| KH domain RNA binding protein [Aspergillus niger CBS 513.88]
Length = 444
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAF 168
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGGS+I+ I++ SGA +
Sbjct: 169 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARL 224
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ LP STER + I GV DAV A Y + + +V+
Sbjct: 225 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVE 261
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF LI +
Sbjct: 114 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAFGLIIR 173
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGGS+I+ I++ SGA + +
Sbjct: 174 TL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARLNASDA 229
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 150
LP STER + I GV DAV A Y + + +V+
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVE 261
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 97 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 148
Query: 122 NSTEREVNIKGVPDAVTQAI 141
+ ER + + G DA +A
Sbjct: 149 GAVERILTVSGPQDAAAKAF 168
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 97 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 148
Query: 567 NSTEREVNIKGVPDAVTQAI 586
+ ER + + G DA +A
Sbjct: 149 GAVERILTVSGPQDAAAKAF 168
>gi|350631260|gb|EHA19631.1| hypothetical protein ASPNIDRAFT_52961 [Aspergillus niger ATCC 1015]
Length = 462
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAF 168
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGGS+I+ I++ SGA +
Sbjct: 169 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARL 224
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ LP STER + I GV DAV A Y + + +V+
Sbjct: 225 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVE 261
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF LI +
Sbjct: 114 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAFGLIIR 173
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGGS+I+ I++ SGA + +
Sbjct: 174 TL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARLNASDA 229
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 150
LP STER + I GV DAV A Y + + +V+
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVE 261
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT +
Sbjct: 394 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECN 450
Query: 322 ALAQYLI 328
+A Y++
Sbjct: 451 QMALYML 457
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT +
Sbjct: 394 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECN 450
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 451 QMALYML 457
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N D PS Q + +P+ LIG++IGKGG++I EI+ SGA R++ S
Sbjct: 176 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGA--RLNASDAC 230
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
S +R++ + G DA+ +A Y + ++ VE L G
Sbjct: 231 LPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGG 269
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N D PS Q + +P+ LIG++IGKGG++I EI+ SGA R++ S
Sbjct: 176 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGA--RLNASDAC 230
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S +R++ + G DA+ +A Y + ++ VE L G
Sbjct: 231 LPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGG 269
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 97 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 148
Query: 122 NSTEREVNIKGVPDAVTQAI 141
+ ER + + G DA +A
Sbjct: 149 GAVERILTVSGPQDAAAKAF 168
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 97 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 148
Query: 567 NSTEREVNIKGVPDAVTQAI 586
+ ER + + G DA +A
Sbjct: 149 GAVERILTVSGPQDAAAKAF 168
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 71 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
+GG Q + ++ +P G+IIGKGG++I IR SG+ + + ++ NS ER V I
Sbjct: 385 VGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI-NEPQENSNERLVTI 443
Query: 131 KGVPDAVTQAIYQICLIMVDS 151
G TQ Q+ L M+ S
Sbjct: 444 TG-----TQECNQMALYMLYS 459
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 516 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 575
+GG Q + ++ +P G+IIGKGG++I IR SG+ + + ++ NS ER V I
Sbjct: 385 VGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI-NEPQENSNERLVTI 443
Query: 576 KGVPDAVTQAIYQICLIMVDS 596
G TQ Q+ L M+ S
Sbjct: 444 TG-----TQECNQMALYMLYS 459
>gi|85111179|ref|XP_963814.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|28925551|gb|EAA34578.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|38566984|emb|CAE76284.1| related to hnRNP protein E2 [Neurospora crassa]
Length = 489
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 89/153 (58%), Gaps = 10/153 (6%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V K+RE S +K +SD ERI+TV G +D++ +AF
Sbjct: 126 HVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGVVDAVAKAF 185
Query: 499 SLI--TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI T N E + N H S+ LRL++P GSIIGKGG++IK I+E SGA
Sbjct: 186 GLIIRTLNNEPLAEPSNTH------SKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA 239
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ + LP STER + + GV DAV A Y +
Sbjct: 240 RLNASDSCLPLSTERSLVVMGVADAVHIATYYV 272
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 85/144 (59%), Gaps = 10/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLI--TKNI 60
E +IIGK GE V K+RE S +K +SD ERI+TV G +D++ +AF LI T N
Sbjct: 135 EAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGVVDAVAKAFGLIIRTLNN 194
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + N H S+ LRL++P GSIIGKGG++IK I+E SGA + + L
Sbjct: 195 EPLAEPSNTH------SKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDSCL 248
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
P STER + + GV DAV A Y +
Sbjct: 249 PLSTERSLVVMGVADAVHIATYYV 272
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 58/77 (75%), Gaps = 3/77 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 407 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 463
Query: 322 ALAQYLINMSVELLRAN 338
+A YL+ + L+ N
Sbjct: 464 RMALYLLYQRLGELQNN 480
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 58/77 (75%), Gaps = 3/77 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 407 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 463
Query: 767 ALAQYLINMSVELLRAN 783
+A YL+ + L+ N
Sbjct: 464 RMALYLLYQRLGELQNN 480
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
++ +N + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R+
Sbjct: 198 AEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERS 255
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ + G DA+ +A Y + + L LN GG
Sbjct: 256 LVVMGVADAVHIATYYVGST---LLEQLNERFGG 286
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
++ +N + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R+
Sbjct: 198 AEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERS 255
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ + G DA+ +A Y + + L LN GG
Sbjct: 256 LVVMGVADAVHIATYYVGST---LLEQLNERFGG 286
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E+ I +R ++ + + +IIGKGG + IRE S A V SD + ER + + GV
Sbjct: 119 HDETAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTV-SDYQKGAVERILTVSGV 177
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 178 VDAVAKAFGLIIRTLNNEP 196
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ E+ I +R ++ + + +IIGKGG + IRE S A V SD + ER + + GV
Sbjct: 119 HDETAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTV-SDYQKGAVERILTVSGV 177
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 178 VDAVAKAFGLIIRTLNNEP 196
Score = 39.7 bits (91), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G+IIGKGG +I IR+ SG+ + + ++ NS ER V I G + A+Y
Sbjct: 410 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI-NEPQDNSNERLVTITGTEECNRMALY 468
Score = 39.7 bits (91), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G+IIGKGG +I IR+ SG+ + + ++ NS ER V I G + A+Y
Sbjct: 410 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI-NEPQDNSNERLVTITGTEECNRMALY 468
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG+IIGK G+ + ++R+ SGS I I++ ++ ER+VT+ G+ + A L+ + + E
Sbjct: 418 VGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYLLYQRLGEL 477
Query: 64 HKN 66
N
Sbjct: 478 QNN 480
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG+IIGK G+ + ++R+ SGS I I++ ++ ER+VT+ G+ + A L+ + + E
Sbjct: 418 VGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYLLYQRLGEL 477
Query: 509 HKN 511
N
Sbjct: 478 QNN 480
>gi|358367184|dbj|GAA83803.1| KH domain RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 468
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF
Sbjct: 109 HIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAF 168
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGKGGS+I+ I++ SGA +
Sbjct: 169 GLIIRTL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARL 224
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ LP STER + I GV DAV A Y + + +V+
Sbjct: 225 NASDACLPLSTERSLVILGVADAVHIATYYVAVTLVE 261
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ +E ++IGK GE V ++R SG+K +SD S ERI+TV G D+ +AF LI +
Sbjct: 114 ISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGPQDAAAKAFGLIIR 173
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ N+ +S+ LRL++P GSIIGKGGS+I+ I++ SGA + +
Sbjct: 174 TL----NNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGARLNASDA 229
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 150
LP STER + I GV DAV A Y + + +V+
Sbjct: 230 CLPLSTERSLVILGVADAVHIATYYVAVTLVE 261
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT +
Sbjct: 394 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECN 450
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 451 QMALYMLYSRLE 462
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +E+SN+R +T+TGT +
Sbjct: 394 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQENSNERLVTITGTQECN 450
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 451 QMALYMLYSRLE 462
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N D PS Q + +P+ LIG++IGKGG++I EI+ SGA R++ S
Sbjct: 176 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGA--RLNASDAC 230
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
S +R++ + G DA+ +A Y + ++ VE L G
Sbjct: 231 LPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGG 269
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N D PS Q + +P+ LIG++IGKGG++I EI+ SGA R++ S
Sbjct: 176 NNEPLDAPS---TAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQDASGA--RLNASDAC 230
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S +R++ + G DA+ +A Y + ++ VE L G
Sbjct: 231 LPLSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGG 269
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 97 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 148
Query: 122 NSTEREVNIKGVPDAVTQAI 141
+ ER + + G DA +A
Sbjct: 149 GAVERILTVSGPQDAAAKAF 168
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E H+ Q+ ES I +R ++ + + ++IGKGG + IR SGA V SD
Sbjct: 97 EQHRPQD-------ESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTV-SDYSR 148
Query: 567 NSTEREVNIKGVPDAVTQAI 586
+ ER + + G DA +A
Sbjct: 149 GAVERILTVSGPQDAAAKAF 168
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 71 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
+GG Q + ++ +P G+IIGKGG++I IR SG SV ++ NS ER V I
Sbjct: 385 VGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSG-SVIKINEPQENSNERLVTI 443
Query: 131 KGVPDAVTQAIYQICLIMVDS 151
G TQ Q+ L M+ S
Sbjct: 444 TG-----TQECNQMALYMLYS 459
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 516 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 575
+GG Q + ++ +P G+IIGKGG++I IR SG SV ++ NS ER V I
Sbjct: 385 VGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSG-SVIKINEPQENSNERLVTI 443
Query: 576 KGVPDAVTQAIYQICLIMVDS 596
G TQ Q+ L M+ S
Sbjct: 444 TG-----TQECNQMALYMLYS 459
>gi|336465527|gb|EGO53767.1| hypothetical protein NEUTE1DRAFT_119308 [Neurospora tetrasperma
FGSC 2508]
gi|350295174|gb|EGZ76151.1| eukaryotic type KH-domain (KH-domain type I) [Neurospora
tetrasperma FGSC 2509]
Length = 481
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 89/153 (58%), Gaps = 10/153 (6%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V K+RE S +K +SD ERI+TV G +D++ +AF
Sbjct: 126 HVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGVVDAVAKAF 185
Query: 499 SLITKNI--EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI + + E + N H S+ LRL++P GSIIGKGG++IK I+E SGA
Sbjct: 186 GLIIRTLNNEPLAEPSNTH------SKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA 239
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ + LP STER + + GV DAV A Y +
Sbjct: 240 RLNASDSCLPLSTERSLVVMGVADAVHIATYYV 272
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 85/144 (59%), Gaps = 10/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI-- 60
E +IIGK GE V K+RE S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 135 EAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGVVDAVAKAFGLIIRTLNN 194
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + N H S+ LRL++P GSIIGKGG++IK I+E SGA + + L
Sbjct: 195 EPLAEPSNTH------SKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDSCL 248
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
P STER + + GV DAV A Y +
Sbjct: 249 PLSTERSLVVMGVADAVHIATYYV 272
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 407 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 463
Query: 322 ALAQYLINMSVE 333
+A YL+ +E
Sbjct: 464 RMALYLLYQRLE 475
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 407 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 463
Query: 767 ALAQYLINMSVE 778
+A YL+ +E
Sbjct: 464 RMALYLLYQRLE 475
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
++ +N + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R+
Sbjct: 198 AEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERS 255
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ + G DA+ +A Y + + L LN GG
Sbjct: 256 LVVMGVADAVHIATYYVGST---LLEQLNERFGG 286
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
++ +N + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R+
Sbjct: 198 AEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERS 255
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ + G DA+ +A Y + + L LN GG
Sbjct: 256 LVVMGVADAVHIATYYVGST---LLEQLNERFGG 286
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E+ I +R ++ + + +IIGKGG + IRE S A V SD + ER + + GV
Sbjct: 119 HDETAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTV-SDYQKGAVERILTVSGV 177
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 178 VDAVAKAFGLIIRTLNNEP 196
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ E+ I +R ++ + + +IIGKGG + IRE S A V SD + ER + + GV
Sbjct: 119 HDETAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTV-SDYQKGAVERILTVSGV 177
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 178 VDAVAKAFGLIIRTLNNEP 196
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE-E 62
VG+IIGK G+ + ++R+ SGS I I++ ++ ER+VT+ G+ + A L+ + +E E
Sbjct: 418 VGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYLLYQRLESE 477
Query: 63 FHKN 66
H++
Sbjct: 478 KHRS 481
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE-E 507
VG+IIGK G+ + ++R+ SGS I I++ ++ ER+VT+ G+ + A L+ + +E E
Sbjct: 418 VGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYLLYQRLESE 477
Query: 508 FHKN 511
H++
Sbjct: 478 KHRS 481
>gi|291221774|ref|XP_002730893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Saccoglossus kowalevskii]
Length = 437
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 7/167 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G+IIGK G + +LR + + + + D S PERI+TV + ++ +
Sbjct: 50 LRILLQSKNAGAIIGKGGNNIHRLRTQYNATVTVPDCSGPERILTVTTNQETALSCLLDV 109
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ Q K L + E +R++V SQ G+IIG+ G +IK +RE +GA++ V
Sbjct: 110 IPVLEEYQ--QYKDLDFDCE-----MRMLVHQSQAGAIIGRAGFKIKELREQTGANIKVY 162
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
S++ PNSTER V + G P+ V + I ++ +P KG Y P
Sbjct: 163 SEVCPNSTERVVQMNGSPEVVINCMRMILDVLNQTPIKGPVQLYDPY 209
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G+IIGK G + +LR + + + + D S PERI+TV + ++ + +
Sbjct: 54 LQSKNAGAIIGKGGNNIHRLRTQYNATVTVPDCSGPERILTVTTNQETALSCLLDVIPVL 113
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ Q K L + E +R++V SQ G+IIG+ G +IK +RE +GA++ V S++
Sbjct: 114 EEYQ--QYKDLDFDCE-----MRMLVHQSQAGAIIGRAGFKIKELREQTGANIKVYSEVC 166
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
PNSTER V + G P+ V + I ++ +P KG Y P
Sbjct: 167 PNSTERVVQMNGSPEVVINCMRMILDVLNQTPIKGPVQLYDPY 209
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T ++T+P +L G++IGKGG++I +IR+ SGA+I+I E SNDR IT+ GTP+ I
Sbjct: 356 TTQVTIPKDLAGSIIGKGGSRIGQIREDSGALIKI---DEPLPGSNDRIITIKGTPEQIQ 412
Query: 323 LAQYLINMSV 332
AQYL+ V
Sbjct: 413 NAQYLLQNRV 422
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T ++T+P +L G++IGKGG++I +IR+ SGA+I+I E SNDR IT+ GTP+ I
Sbjct: 356 TTQVTIPKDLAGSIIGKGGSRIGQIREDSGALIKI---DEPLPGSNDRIITIKGTPEQIQ 412
Query: 768 LAQYLINMSV 777
AQYL+ V
Sbjct: 413 NAQYLLQNRV 422
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
SQ ++ +P GSIIGKGGS+I IRE SGA + + + LP S +R + IKG P+
Sbjct: 352 SQFTTTQVTIPKDLAGSIIGKGGSRIGQIREDSGALIKI-DEPLPGSNDRIITIKGTPEQ 410
Query: 137 VTQAIY 142
+ A Y
Sbjct: 411 IQNAQY 416
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
SQ ++ +P GSIIGKGGS+I IRE SGA + + + LP S +R + IKG P+
Sbjct: 352 SQFTTTQVTIPKDLAGSIIGKGGSRIGQIREDSGALIKI-DEPLPGSNDRIITIKGTPEQ 410
Query: 582 VTQAIY 587
+ A Y
Sbjct: 411 IQNAQY 416
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP-- 481
+P Y + MR ++ + G+IIG++G +K+LRE++G+ I + P
Sbjct: 110 IPVLEEYQQYKDLDFDCEMRMLVHQSQAGAIIGRAGFKIKELREQTGANIKVYSEVCPNS 169
Query: 482 -ERIVTVIGSMDSLFRAFSLI 501
ER+V + GS + + +I
Sbjct: 170 TERVVQMNGSPEVVINCMRMI 190
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
M V GA+IG+ G KI E+R+ +GA I++ SE +S +R + M G+P+ +
Sbjct: 130 MLVHQSQAGAIIGRAGFKIKELREQTGANIKV--YSEVCPNSTERVVQMNGSPEVVINCM 187
Query: 326 YLI 328
+I
Sbjct: 188 RMI 190
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
M V GA+IG+ G KI E+R+ +GA I++ SE +S +R + M G+P+ +
Sbjct: 130 MLVHQSQAGAIIGRAGFKIKELREQTGANIKV--YSEVCPNSTERVVQMNGSPEVVINCM 187
Query: 771 YLI 773
+I
Sbjct: 188 RMI 190
>gi|336265613|ref|XP_003347577.1| hypothetical protein SMAC_04885 [Sordaria macrospora k-hell]
gi|380096444|emb|CCC06492.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 469
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 426 QGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPER 483
Q P A +R ++ E +IIGK GE V K+RE S +K +SD ER
Sbjct: 111 QPPVSAQPHDETAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVER 170
Query: 484 IVTVIGSMDSLFRAFSLITKNI--EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
I+TV G +D++ +AF LI + + E + N H S+ LRL++P GSIIG
Sbjct: 171 ILTVSGVVDAVAKAFGLIIRTLNNEPLAEPSNTH------SKTYPLRLLIPHVLIGSIIG 224
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
KGG++IK I+E SGA + + LP STER + + GV DAV A Y +
Sbjct: 225 KGGARIKEIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATYYV 272
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 85/144 (59%), Gaps = 10/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI-- 60
E +IIGK GE V K+RE S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 135 EAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGVVDAVAKAFGLIIRTLNN 194
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + N H S+ LRL++P GSIIGKGG++IK I+E SGA + + L
Sbjct: 195 EPLAEPSNTH------SKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDSCL 248
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
P STER + + GV DAV A Y +
Sbjct: 249 PLSTERSLVVMGVADAVHIATYYV 272
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 387 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 443
Query: 322 ALAQYLI 328
+A YL+
Sbjct: 444 RMALYLL 450
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 387 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 443
Query: 767 ALAQYLI 773
+A YL+
Sbjct: 444 RMALYLL 450
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 18/277 (6%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
++ +N + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R+
Sbjct: 198 AEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERS 255
Query: 312 ITMTGTPDAIALAQYLINMS-VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNAS 370
+ + G DA+ +A Y + + +E L G ++ +
Sbjct: 256 LVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYAHPLLAAALATAITTSATAAPTP 315
Query: 371 NPLAAALPQ-----LAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVP 425
P A P + ++ L + G++G G P
Sbjct: 316 GPSTACRPASTLRPMVHLIRPSPTLPSPMHYGGHAAAGYGAAAPHVAPHVGHAGP-GPHP 374
Query: 426 QGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPER 483
GP+ A + + +++ + VG+IIGK G+ + ++R+ SGS I I++ ++ ER
Sbjct: 375 AGPHGAPVAGAALTQQI--YIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNER 432
Query: 484 IVTVIGSMDSLFRAFSLITKNIEEFHKN-----QNKH 515
+VT+ G+ + A L+ + + E N Q KH
Sbjct: 433 LVTITGTEECNRMALYLLYQRLGELQNNARDSQQPKH 469
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
++ +N + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R+
Sbjct: 198 AEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTERS 255
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ + G DA+ +A Y + + L LN GG
Sbjct: 256 LVVMGVADAVHIATYYVGST---LLEQLNERFGG 286
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E+ I +R ++ + + +IIGKGG + IRE S A V SD + ER + + GV
Sbjct: 119 HDETAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTV-SDYQKGAVERILTVSGV 177
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 178 VDAVAKAFGLIIRTLNNEP 196
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ E+ I +R ++ + + +IIGKGG + IRE S A V SD + ER + + GV
Sbjct: 119 HDETAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTV-SDYQKGAVERILTVSGV 177
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 178 VDAVAKAFGLIIRTLNNEP 196
Score = 39.3 bits (90), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G+IIGKGG +I IR+ SG SV ++ NS ER V I G + A+Y
Sbjct: 390 QIYIPNDMVGAIIGKGGQKINEIRQISG-SVIKINEPQDNSNERLVTITGTEECNRMALY 448
Score = 39.3 bits (90), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G+IIGKGG +I IR+ SG SV ++ NS ER V I G + A+Y
Sbjct: 390 QIYIPNDMVGAIIGKGGQKINEIRQISG-SVIKINEPQDNSNERLVTITGTEECNRMALY 448
>gi|146197849|dbj|BAF57636.1| hnRNP K protein [Dugesia japonica]
Length = 337
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 163/340 (47%), Gaps = 39/340 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K GS+IGKSGE ++ LR ++I ISD+S PERI+++ +D++ ++
Sbjct: 22 LRFLIPSKAAGSVIGKSGENIRNLRRMFMARINISDNSGPERILSLEADLDTI---LEIL 78
Query: 502 TKNIEEFHKNQNKHLGGNGES----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
T+ +E+ G+G+ + LR++V S G++IG+GG +I +RE
Sbjct: 79 TQCLEKMEGCIPLPRAGSGDCNDSINHVDLRMLVNQSLVGALIGRGGGRINDLREKCDLR 138
Query: 558 VY-VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V V + P+ST+R V + G V I +I + ++P + + Y QN
Sbjct: 139 VLKVYQTVCPDSTDRIVQLVGAIPLVIDCIGKIVDMCKETPVREPKVNYD--AQNYDHAA 196
Query: 617 LIGNQFG--MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
N +G QN++ P L LG + G + + K
Sbjct: 197 --ANHYGGWAQNAI--------RPNNNLTTRSLGFSRPGFLK-----------HQASYKN 235
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
H + N + + + R+ ++Q N +E+ +P++++GA+IG GG++I ++R
Sbjct: 236 EHYDYSYPNNYREMDTSFRNS---HYDEQDNNEVQEIRLPHKVVGAIIGPGGSRIQQVRM 292
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
SGA I IS + + +R +T++G + A +IN
Sbjct: 293 DSGAHITISSP---DRNPQERVVTISGNTQDVKRAFSMIN 329
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 159/333 (47%), Gaps = 39/333 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K GS+IGKSGE ++ LR ++I ISD+S PERI+++ +D++ ++T+ +E+
Sbjct: 29 KAAGSVIGKSGENIRNLRRMFMARINISDNSGPERILSLEADLDTI---LEILTQCLEKM 85
Query: 64 HKNQNKHLGGNGES----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY-VASD 118
G+G+ + LR++V S G++IG+GG +I +RE V V
Sbjct: 86 EGCIPLPRAGSGDCNDSINHVDLRMLVNQSLVGALIGRGGGRINDLREKCDLRVLKVYQT 145
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
+ P+ST+R V + G V I +I + ++P + + Y QN N +G
Sbjct: 146 VCPDSTDRIVQLVGAIPLVIDCIGKIVDMCKETPVREPKVNYD--AQNYDHAA--ANHYG 201
Query: 179 --MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
QN++ P L LG + G + + K H +
Sbjct: 202 GWAQNAI--------RPNNNLTTRSLGFSRPGFLK-----------HQASYKNEHYDYSY 242
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N + + + R+ ++Q N +E+ +P++++GA+IG GG++I ++R SGA I
Sbjct: 243 PNNYREMDTSFRNS---HYDEQDNNEVQEIRLPHKVVGAIIGPGGSRIQQVRMDSGAHIT 299
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
IS + + +R +T++G + A +IN
Sbjct: 300 ISSP---DRNPQERVVTISGNTQDVKRAFSMIN 329
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 110/268 (41%), Gaps = 45/268 (16%)
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDSNDRTIT 313
N N + M V L+GA+IG+GG +I ++R+ +R+ K + DS DR +
Sbjct: 99 CNDSINHVDLRMLVNQSLVGALIGRGGGRINDLRE--KCDLRVLKVYQTVCPDSTDRIVQ 156
Query: 314 MTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPL 373
+ G AI L I V++ + P P +A N
Sbjct: 157 LVG---AIPLVIDCIGKIVDMCKET--------------------PVREPKVNYDAQNYD 193
Query: 374 AAALPQ---LAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGS-------GNSGGFGG 423
AA AQ +P N LT+ S L +S N
Sbjct: 194 HAAANHYGGWAQNAIRPN--NNLTTRSLGFSRPGFLKHQASYKNEHYDYSYPNNYREMDT 251
Query: 424 VPQGPNYANIQTTGVQR-RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSST 480
+ +Y VQ R+ H K VG+IIG G ++++R +SG+ I IS D +
Sbjct: 252 SFRNSHYDEQDNNEVQEIRLPH----KVVGAIIGPGGSRIQQVRMDSGAHITISSPDRNP 307
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEEF 508
ER+VT+ G+ + RAFS+I + + ++
Sbjct: 308 QERVVTISGNTQDVKRAFSMINECLGKY 335
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFSLITKNIE 61
K VG+IIG G ++++R +SG+ I IS D + ER+VT+ G+ + RAFS+I + +
Sbjct: 274 KVVGAIIGPGGSRIQQVRMDSGAHITISSPDRNPQERVVTISGNTQDVKRAFSMINECLG 333
Query: 62 EF 63
++
Sbjct: 334 KY 335
>gi|72164650|ref|XP_794805.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 341
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 12/181 (6%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGS-----MDS 493
Q R ++ + G +IGK G+ +K+LR E + + I DSS P+R++ ++ + +D
Sbjct: 8 QVTFRLLVSSNKAGGVIGKGGQNIKRLRSEYNATVNIPDSSGPDRVLQIVANSRENGLDI 67
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
+ LI + + F G + L ++V SQ G+IIG+GGS+IK +R++
Sbjct: 68 IKELIPLIREEVSPFSD-------GEADPYTTTLSVLVQTSQVGAIIGRGGSKIKELRQS 120
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
+ V V + LP STER V I G PDAV AI +I + ++P KG+ + Y P Q+
Sbjct: 121 TETKVKVLQECLPYSTERRVQINGAPDAVLLAIGEIYVTCSEAPIKGSVLLYDPSQQDPS 180
Query: 614 G 614
G
Sbjct: 181 G 181
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 12/168 (7%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGS-----MDSLFRAFSLITKNIE 61
G +IGK G+ +K+LR E + + I DSS P+R++ ++ + +D + LI + +
Sbjct: 21 GGVIGKGGQNIKRLRSEYNATVNIPDSSGPDRVLQIVANSRENGLDIIKELIPLIREEVS 80
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
F G + L ++V SQ G+IIG+GGS+IK +R+++ V V + LP
Sbjct: 81 PFSD-------GEADPYTTTLSVLVQTSQVGAIIGRGGSKIKELRQSTETKVKVLQECLP 133
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG 169
STER V I G PDAV AI +I + ++P KG+ + Y P Q+ G
Sbjct: 134 YSTERRVQINGAPDAVLLAIGEIYVTCSEAPIKGSVLLYDPSQQDPSG 181
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T ++T+PN+L+GAVIG+GG +I IR S A I I+ E E DR IT+ GT + ++
Sbjct: 267 TTQVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIANPLPEAE---DRVITIRGTQEQVS 323
Query: 323 LAQYLINMSVE 333
AQ+L+ ++
Sbjct: 324 HAQFLLQNCIQ 334
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T ++T+PN+L+GAVIG+GG +I IR S A I I+ E E DR IT+ GT + ++
Sbjct: 267 TTQVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIANPLPEAE---DRVITIRGTQEQVS 323
Query: 768 LAQYLINMSVE 778
AQ+L+ ++
Sbjct: 324 HAQFLLQNCIQ 334
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G++IG+GG +I+ IR S A + +A + LP + +R + I+G + V+ A +
Sbjct: 269 QVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIA-NPLPEAEDRVITIRGTQEQVSHAQF 327
Query: 143 --QICL 146
Q C+
Sbjct: 328 LLQNCI 333
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G++IG+GG +I+ IR S A + +A + LP + +R + I+G + V+ A +
Sbjct: 269 QVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIA-NPLPEAEDRVITIRGTQEQVSHAQF 327
Query: 588 --QICL 591
Q C+
Sbjct: 328 LLQNCI 333
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 158/348 (45%), Gaps = 62/348 (17%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
+R ++ G IIGK G T+ + +SG++I +S S+ T +RI+ V G D +
Sbjct: 42 HLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFDEVM 101
Query: 496 RAFSLITKNI----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+A LI + + EEF++ + + ++RL+VP S CG IIGKGG+ IK+
Sbjct: 102 KAMELILEKLLAEGEEFNEAEARP----------KVRLVVPNSSCGGIIGKGGATIKSFI 151
Query: 552 ETSGASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
E S A + ++ + +R V I G D AI I + L
Sbjct: 152 EESHAGIKISPQDNNYVGLHDRLVTITGTFDNQMNAIDLIL---------------KKLS 196
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
++ P + + F P AGL G G M + +
Sbjct: 197 EDVHYPPNLSSPF---------------PYAGLTFPSYPGVPVGYM--------IPQVPY 233
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
S N+ P N + Q+N+ S +N+ Q +T + + +E IGAV+G+ G I
Sbjct: 234 SN-AVNYGPNNGYGGRYQNNKPTTPMRSPASNEAQESLT--IGIADEHIGAVVGRAGRNI 290
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
EI + SGA I+IS + ++DR +T+TGTP+AI A+ +I V
Sbjct: 291 TEIIQASGARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRV 338
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 62/337 (18%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI- 60
G IIGK G T+ + +SG++I +S S+ T +RI+ V G D + +A LI + +
Sbjct: 53 GCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFDEVMKAMELILEKLL 112
Query: 61 ---EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA- 116
EEF++ + + ++RL+VP S CG IIGKGG+ IK+ E S A + ++
Sbjct: 113 AEGEEFNEAEARP----------KVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISP 162
Query: 117 -SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
+ +R V I G D AI I + L ++ P + +
Sbjct: 163 QDNNYVGLHDRLVTITGTFDNQMNAIDLIL---------------KKLSEDVHYPPNLSS 207
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
F P AGL G G M + + S N+ P N
Sbjct: 208 PF---------------PYAGLTFPSYPGVPVGYM--------IPQVPYSN-AVNYGPNN 243
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+ Q+N+ S +N+ Q +T + + +E IGAV+G+ G I EI + SGA I
Sbjct: 244 GYGGRYQNNKPTTPMRSPASNEAQESLT--IGIADEHIGAVVGRAGRNITEIIQASGARI 301
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+IS + ++DR +T+TGTP+AI A+ +I V
Sbjct: 302 KISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRV 338
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 66/271 (24%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
++ N+ + + + VPN G +IGKGG I + S A I+IS +DR +
Sbjct: 116 EEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLV 175
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 371
T+TGT D A ++L+ L+ +D NL S P AGL +
Sbjct: 176 TITGTFDNQMNA-------IDLILKKLS---------EDVHYPPNLSSPFPYAGLTFPSY 219
Query: 372 ---PLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGP 428
P+ +PQ+ S+ G + G+GG
Sbjct: 220 PGVPVGYMIPQVPY---------------------------SNAVNYGPNNGYGG----- 247
Query: 429 NYANIQTTG---------VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-- 477
Y N + T Q + + + +G+++G++G + ++ + SG++I ISD
Sbjct: 248 RYQNNKPTTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRG 307
Query: 478 ---SSTPERIVTVIGSMDSLFRAFSLITKNI 505
S T +R VT+ G+ +++ A S+I + +
Sbjct: 308 DYISGTSDRKVTITGTPEAIRTAESMIMQRV 338
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
V N G +IGKGG+ I + + SGA I++S+S+E +NDR I ++G D + A L
Sbjct: 47 VSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFDEVMKAMEL 106
Query: 328 I 328
I
Sbjct: 107 I 107
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
++ N+ + + + VPN G +IGKGG I + S A I+IS +DR +
Sbjct: 116 EEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLV 175
Query: 758 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 816
T+TGT D A ++L+ L+ +D NL S P AGL +
Sbjct: 176 TITGTFDNQMNA-------IDLILKKLS---------EDVHYPPNLSSPFPYAGLTFPSY 219
Query: 817 ---PLAAALPQL 825
P+ +PQ+
Sbjct: 220 PGVPVGYMIPQV 231
>gi|50545305|ref|XP_500190.1| YALI0A18161p [Yarrowia lipolytica]
gi|49646055|emb|CAG84122.1| YALI0A18161p [Yarrowia lipolytica CLIB122]
Length = 385
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 163/389 (41%), Gaps = 50/389 (12%)
Query: 415 SGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIY 474
+GN F P G N A + Q +R ++ KE G IIGK G TV LR+ + K
Sbjct: 43 AGNFASFANDPIG-NPATLGDDTTQLVLRALVSTKEAGVIIGKDGATVAGLRDAAKVKAG 101
Query: 475 ISDSST--PERIVTVIGSMDSLFRAFSLITKNIEEFHKN-QNKHLGGNGESQLIQLRLIV 531
++ S P+RI++V G+ + RA L + + +L G +RL++
Sbjct: 102 VTKSVAGIPDRILSVAGTAAGVSRAIGLAAAALVAHPPSGYVLNLVPPGPQGTTTVRLLI 161
Query: 532 PASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICL 591
P + GSI+GKGG +IK I+ G + + LP+S+ER V I+G P A+ A+Y +
Sbjct: 162 PHQRMGSILGKGGVRIKAIQAKYGVRIVASKHRLPHSSERIVEIQGEPLALQTAVYTVVQ 221
Query: 592 IMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNS 651
+++ K + Y N ++ S+ D + A G
Sbjct: 222 CLLEEKDKSILVAYY-------------NPRSLEGSMTLREDPEDKEYVSFA-----GYR 263
Query: 652 GGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEM 711
G GG S T+ + + ++ D Q T
Sbjct: 264 GRHQDGG-----------SDTDTDREATVSDHGGDAEALSSSDACVQST----------- 301
Query: 712 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 771
+P G +IG+ G I E+RK SGA I IS E E RT+ M G+ A+ALA
Sbjct: 302 IIPASFAGYIIGRRGDNIRELRKRSGAAISISSEYERE-----RTLLMRGSEAAVALAMS 356
Query: 772 LINMSVELLRANLNGEGGGESNMDDFSSD 800
++ ++ R + G E + F SD
Sbjct: 357 MLQQQMDEERER-RAQVGSEEGNNGFCSD 384
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 149/355 (41%), Gaps = 49/355 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G TV LR+ + K ++ S P+RI++V G+ + RA L +
Sbjct: 76 KEAGVIIGKDGATVAGLRDAAKVKAGVTKSVAGIPDRILSVAGTAAGVSRAIGLAAAALV 135
Query: 62 EFHKN-QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+ +L G +RL++P + GSI+GKGG +IK I+ G + + L
Sbjct: 136 AHPPSGYVLNLVPPGPQGTTTVRLLIPHQRMGSILGKGGVRIKAIQAKYGVRIVASKHRL 195
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
P+S+ER V I+G P A+ A+Y + +++ K + Y N ++
Sbjct: 196 PHSSERIVEIQGEPLALQTAVYTVVQCLLEEKDKSILVAYY-------------NPRSLE 242
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
S+ D + A G G GG S T+ +
Sbjct: 243 GSMTLREDPEDKEYVSFA-----GYRGRHQDGG-----------SDTDTDREATVSDHGG 286
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ ++ D Q T +P G +IG+ G I E+RK SGA I IS
Sbjct: 287 DAEALSSSDACVQST-----------IIPASFAGYIIGRRGDNIRELRKRSGAAISISSE 335
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 355
E E RT+ M G+ A+ALA ++ ++ R + G E + F SD
Sbjct: 336 YERE-----RTLLMRGSEAAVALAMSMLQQQMDEERER-RAQVGSEEGNNGFCSD 384
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G+IIGK G +K+LR + + + + DSS PER++TV ++ + +
Sbjct: 28 LRILLQSKNAGAIIGKGGANIKRLRSDYNATVTVPDSSGPERVLTVGANLGTALEILLDV 87
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E++ + ++ ++R ++ SQ G +IG+GG++IK +R+ +GA + V
Sbjct: 88 IPSLEDYKRFKDLEFE-------CEMRWLIHQSQAGCVIGRGGNKIKELRDETGAQIKVY 140
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
S P S+ER V + G P V ++ I ++ +PPKG PY P
Sbjct: 141 SQCAPQSSERIVQLTGKPRVVVNSLATIFDLLQTAPPKGFNNPYDP 186
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G+IIGK G +K+LR + + + + DSS PER++TV ++ + + ++
Sbjct: 32 LQSKNAGAIIGKGGANIKRLRSDYNATVTVPDSSGPERVLTVGANLGTALEILLDVIPSL 91
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E++ + ++ ++R ++ SQ G +IG+GG++IK +R+ +GA + V S
Sbjct: 92 EDYKRFKDLEFE-------CEMRWLIHQSQAGCVIGRGGNKIKELRDETGAQIKVYSQCA 144
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P S+ER V + G P V ++ I ++ +PPKG PY P
Sbjct: 145 PQSSERIVQLTGKPRVVVNSLATIFDLLQTAPPKGFNNPYDP 186
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP-- 481
+P +Y + + MR ++ + G +IG+ G +K+LR+E+G++I + P
Sbjct: 88 IPSLEDYKRFKDLEFECEMRWLIHQSQAGCVIGRGGNKIKELRDETGAQIKVYSQCAPQS 147
Query: 482 -ERIVTVIGS----MDSLFRAFSLI 501
ERIV + G ++SL F L+
Sbjct: 148 SERIVQLTGKPRVVVNSLATIFDLL 172
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
G+IIGK G ++++R+ESG+ I I + + +RI+T+ GS D + A L+ +++++
Sbjct: 336 GAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQDQIQNAQYLLQMSVKQY 394
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
G+IIGK G ++++R+ESG+ I I + + +RI+T+ GS D + A L+ +++++
Sbjct: 336 GAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQDQIQNAQYLLQMSVKQY 394
>gi|68475799|ref|XP_718106.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|68475932|ref|XP_718039.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439785|gb|EAK99099.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439861|gb|EAK99174.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|238882982|gb|EEQ46620.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 529
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 172/385 (44%), Gaps = 57/385 (14%)
Query: 436 TGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDS 493
T +Q RM KE +I+G+ GET+ LRE++ +I +S++ PERIV V G ++
Sbjct: 158 TFIQLRM--YCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKGPAEN 215
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
+ RAF LIT+ I E +++ + SQ L+L++P G IIGK G + + I E
Sbjct: 216 VARAFGLITRVILEEPEDEPASIN----SQQYNLKLLIPHPMIGFIIGKQGLKFREIEEN 271
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY---QICLIMVDSPPKGATI-----PY 605
S A + A + LP ST+R +++ GV DA+ A+Y Q+ L + K + Y
Sbjct: 272 SAAKLKAAENALPYSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKHKVVLYNPANY 331
Query: 606 RPLPQNAGG------PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLG---------GN 650
+P Q+ GG N G Q L P P + +
Sbjct: 332 QPTDQSLGGRQRQPPSNSYNNPMGYQAKL---PPFSKPPQHQQSPYNFSMMFQPAVQPQH 388
Query: 651 SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKE 710
G + NA + + S N P+NQ ++ + + Q++ ++
Sbjct: 389 FGSPVTSNPNAVSPVGMQPS---VNIPPQNQFTDEFGNTIVGEVITTPPIQAGQDKYNQD 445
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEED-------------SNDRT 756
+ V N IG+VIGK G I IR+ S ++I E D +N R
Sbjct: 446 VFVANSSIGSVIGKRGNNIKHIRETSACTYVKI------EPDKGQSMMLGGGKGMTNIRK 499
Query: 757 ITMTGTPDAIALAQYLINMSVELLR 781
+T+TGT ++I A YLIN + R
Sbjct: 500 LTLTGTLNSIQTAIYLINQRINADR 524
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 167/372 (44%), Gaps = 55/372 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +I+G+ GET+ LRE++ +I +S++ PERIV V G +++ RAF LIT+ I
Sbjct: 169 KEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKGPAENVARAFGLITRVIL 228
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E +++ + SQ L+L++P G IIGK G + + I E S A + A + LP
Sbjct: 229 EEPEDEPASIN----SQQYNLKLLIPHPMIGFIIGKQGLKFREIEENSAAKLKAAENALP 284
Query: 122 NSTEREVNIKGVPDAVTQAIY---QICLIMVDSPPKGATI-----PYRPLPQNAGG---- 169
ST+R +++ GV DA+ A+Y Q+ L + K + Y+P Q+ GG
Sbjct: 285 YSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKHKVVLYNPANYQPTDQSLGGRQRQ 344
Query: 170 --PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLG---------GNSGGGMGGGLNAAA 218
N G Q L P P + + G + NA +
Sbjct: 345 PPSNSYNNPMGYQAKL---PPFSKPPQHQQSPYNFSMMFQPAVQPQHFGSPVTSNPNAVS 401
Query: 219 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 278
+ S N P+NQ ++ + + Q++ +++ V N IG+VIG
Sbjct: 402 PVGMQPS---VNIPPQNQFTDEFGNTIVGEVITTPPIQAGQDKYNQDVFVANSSIGSVIG 458
Query: 279 KGGTKIFEIRKISGA-MIRISKSSEEEED-------------SNDRTITMTGTPDAIALA 324
K G I IR+ S ++I E D +N R +T+TGT ++I A
Sbjct: 459 KRGNNIKHIRETSACTYVKI------EPDKGQSMMLGGGKGMTNIRKLTLTGTLNSIQTA 512
Query: 325 QYLINMSVELLR 336
YLIN + R
Sbjct: 513 IYLINQRINADR 524
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
IQLR+ P + +I+G+ G I +RE + + V S+ L ER V +KG + V
Sbjct: 159 FIQLRMYCPVKEASTIVGRKGETINHLREKANVRITV-SENLKGVPERIVAVKGPAENVA 217
Query: 139 QAIYQICLIMVDSP 152
+A I ++++ P
Sbjct: 218 RAFGLITRVILEEP 231
>gi|353237678|emb|CCA69645.1| related to PBP2-PAB1 binding protein [Piriformospora indica DSM
11827]
Length = 406
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 100/157 (63%), Gaps = 9/157 (5%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK G V ++RE+S +K+ +S+S PERI+ V G++D++ +AF
Sbjct: 108 HMRCLIVTQDASIIIGKGGSHVNEIREKSNAKVMVSESIPGNPERILNVSGALDAVSKAF 167
Query: 499 SLITKNIEEFHKNQNKHLGGNGE-SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
LI + I ++ +G + S+ + ++ I+P S+ GS+IGKGG++IK I+E SGA
Sbjct: 168 GLIVRRIN------DEPMGPSVPGSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEASGAR 221
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV 594
+ + MLP STER +++ GV DA+ A Y I I++
Sbjct: 222 LNASEGMLPGSTERILSVTGVADAIHIATYYIGNILI 258
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 94/144 (65%), Gaps = 9/144 (6%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+S +K+ +S+S PERI+ V G++D++ +AF LI + I
Sbjct: 121 IIGKGGSHVNEIREKSNAKVMVSESIPGNPERILNVSGALDAVSKAFGLIVRRIN----- 175
Query: 67 QNKHLGGNGE-SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
++ +G + S+ + ++ I+P S+ GS+IGKGG++IK I+E SGA + + MLP STE
Sbjct: 176 -DEPMGPSVPGSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEASGARLNASEGMLPGSTE 234
Query: 126 REVNIKGVPDAVTQAIYQICLIMV 149
R +++ GV DA+ A Y I I++
Sbjct: 235 RILSVTGVADAIHIATYYIGNILI 258
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 107/271 (39%), Gaps = 69/271 (25%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +P+ +G+VIGKGG KI EI++ SGA R++ S S +R +++TG DAI
Sbjct: 189 VTIKFIIPHSRMGSVIGKGGAKIKEIQEASGA--RLNASEGMLPGSTERILSVTGVADAI 246
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
+A Y I ++ + + +G G S + P
Sbjct: 247 HIATYYIG-NILIQQQEAHGAVG-------LSYRQSRP---------------------- 276
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRR 441
P A N + +GGG+ G F G Q P +G +
Sbjct: 277 -----PRAFN------------ETMGGGAPG-----QQYFPGQYQSPMMPAAVPSGPLQT 314
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---------------ERIVT 486
+ + VG IIGK G + ++R+ S S+I I + ER+V
Sbjct: 315 QQIYIPNDLVGCIIGKGGAKINEIRQTSQSQIKIMEPGAVGVGVGGQQAGPPNEGERLVV 374
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLG 517
+ G ++ A ++ +EE + Q G
Sbjct: 375 ITGQPHNIQMAVGMLYHRLEEEKRKQMAQRG 405
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I +R ++ IIGKGGS + IRE S A V V S+ +P + ER +N+ G DAV++
Sbjct: 107 IHMRCLIVTQDASIIIGKGGSHVNEIREKSNAKVMV-SESIPGNPERILNVSGALDAVSK 165
Query: 140 AIYQICLIMVDSPPKGATIP 159
A + + + ++ P G ++P
Sbjct: 166 A-FGLIVRRINDEPMGPSVP 184
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I +R ++ IIGKGGS + IRE S A V V S+ +P + ER +N+ G DAV++
Sbjct: 107 IHMRCLIVTQDASIIIGKGGSHVNEIREKSNAKVMV-SESIPGNPERILNVSGALDAVSK 165
Query: 585 AIYQICLIMVDSPPKGATIP 604
A + + + ++ P G ++P
Sbjct: 166 A-FGLIVRRINDEPMGPSVP 184
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +P+ +G+VIGKGG KI EI++ SGA R++ S S +R +++TG DAI
Sbjct: 189 VTIKFIIPHSRMGSVIGKGGAKIKEIQEASGA--RLNASEGMLPGSTERILSVTGVADAI 246
Query: 767 ALAQYLI 773
+A Y I
Sbjct: 247 HIATYYI 253
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE----------DSNDRTI 757
T+++ +PN+L+G +IGKGG KI EIR+ S + I+I + + +R +
Sbjct: 314 TQQIYIPNDLVGCIIGKGGAKINEIRQTSQSQIKIMEPGAVGVGVGGQQAGPPNEGERLV 373
Query: 758 TMTGTPDAIALAQYLINMSVE 778
+TG P I +A ++ +E
Sbjct: 374 VITGQPHNIQMAVGMLYHRLE 394
>gi|321455064|gb|EFX66209.1| hypothetical protein DAPPUDRAFT_332423 [Daphnia pulex]
Length = 384
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 3/167 (1%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K GSIIGK G + KLR E+ + I + D PERI+T+ G++D++ +
Sbjct: 35 LRLLVYSKVAGSIIGKGGSNISKLRTENHATILLPDCPGPERILTIQGNLDAVINVLQNV 94
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++EE K + + G G+S RL+V SQ G IIG+GG+++K +RE++G + V
Sbjct: 95 LPSLEEVSKIRGERTGRVGDSDA---RLLVHQSQIGCIIGRGGAKVKELRESTGTRITVY 151
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
S P ST+R V I G P + I QI ++ +S KG Y P
Sbjct: 152 SVCCPRSTDRIVQILGKPSDCGECIKQIIALVKESQVKGPIDQYNPY 198
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K GSIIGK G + KLR E+ + I + D PERI+T+ G++D++ + ++EE
Sbjct: 42 KVAGSIIGKGGSNISKLRTENHATILLPDCPGPERILTIQGNLDAVINVLQNVLPSLEEV 101
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
K + + G G+S RL+V SQ G IIG+GG+++K +RE++G + V S P S
Sbjct: 102 SKIRGERTGRVGDSDA---RLLVHQSQIGCIIGRGGAKVKELRESTGTRITVYSVCCPRS 158
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
T+R V I G P + I QI ++ +S KG Y P
Sbjct: 159 TDRIVQILGKPSDCGECIKQIIALVKESQVKGPIDQYNPY 198
>gi|392873506|gb|AFM85585.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 424
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 95/166 (57%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ S I
Sbjct: 50 LRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSVPDSSGPERILSINADIETIGDILSKI 109
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ + K +LR++V SQ GSIIG G +IK +RE++ ++ +
Sbjct: 110 VPTLEEYQHYKGKDFD-------CELRMLVHQSQAGSIIGVKGVKIKELRESTQTTIKLF 162
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V + G PD V + I I ++ +SP KG PY P
Sbjct: 163 QECCPHSTDRVVLLGGKPDRVVECIKIIMGLLSESPVKGRAQPYDP 208
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ S I +
Sbjct: 54 LQSKNAGAVIGKGGKNIKSLRTDYNASVSVPDSSGPERILSINADIETIGDILSKIVPTL 113
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ + K +LR++V SQ GSIIG G +IK +RE++ ++ + +
Sbjct: 114 EEYQHYKGKDFD-------CELRMLVHQSQAGSIIGVKGVKIKELRESTQTTIKLFQECC 166
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V + G PD V + I I ++ +SP KG PY P
Sbjct: 167 PHSTDRVVLLGGKPDRVVECIKIIMGLLSESPVKGRAQPYDP 208
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 406
Query: 322 ALAQYLINMSV 332
AQYL+ S
Sbjct: 407 QNAQYLLQNSC 417
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 406
Query: 767 ALAQYLINMSV 777
AQYL+ S
Sbjct: 407 QNAQYLLQNSC 417
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 349 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 407
Query: 139 QAIY 142
A Y
Sbjct: 408 NAQY 411
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 349 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 407
Query: 584 QAIY 587
A Y
Sbjct: 408 NAQY 411
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ + F
Sbjct: 362 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSCSSF 420
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ + F
Sbjct: 362 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSCSSF 420
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 57 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
K E H + Q ++LRL++ + G++IGKGG IK++R ASV V
Sbjct: 25 CKRPAEDHDEEQAFKRSRNNDQCVELRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSV 83
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
K E H + Q ++LRL++ + G++IGKGG IK++R ASV V
Sbjct: 25 CKRPAEDHDEEQAFKRSRNNDQCVELRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSV 83
>gi|393220213|gb|EJD05699.1| hypothetical protein FOMMEDRAFT_79532 [Fomitiporia mediterranea
MF3/22]
Length = 281
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 114/200 (57%), Gaps = 14/200 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
MR ++ ++ IIG++G+ V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 4 MRCLIVTQDASIIIGRAGKHVNEIREKSGARVVVSESIPGNPERILNVSGPLDAVSKAFG 63
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + I + + G S+ + ++ ++P S+ GSIIGK G++IK I++ SGA +
Sbjct: 64 LIVRRINDEPFDVPSVPG----SRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLN 119
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYR-----PLPQN 611
+ MLP STER +++ GV DA+ A Y + I+++ P YR P P
Sbjct: 120 ASEGMLPGSTERVLSVAGVADAIHIATYYVGNILIECQERMPSSTNSSYRPSNRAPRPPL 179
Query: 612 AGGPGLIGNQFGMQNSLMGA 631
+GG Q + N L+G
Sbjct: 180 SGGAQSYTQQIYIPNDLVGC 199
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 108/188 (57%), Gaps = 14/188 (7%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIG++G+ V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 16 IIGRAGKHVNEIREKSGARVVVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 75
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GSIIGK G++IK I++ SGA + + MLP STER
Sbjct: 76 VPSVPG----SRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTER 131
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYR-----PLPQNAGGPGLIGNQFG 178
+++ GV DA+ A Y + I+++ P YR P P +GG Q
Sbjct: 132 VLSVAGVADAIHIATYYVGNILIECQERMPSSTNSSYRPSNRAPRPPLSGGAQSYTQQIY 191
Query: 179 MQNSLMGA 186
+ N L+G
Sbjct: 192 IPNDLVGC 199
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 38/274 (13%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I +R ++ IIG+ G + IRE SGA V V S+ +P + ER +N+ G DAV+
Sbjct: 1 MIHMRCLIVTQDASIIIGRAGKHVNEIREKSGARV-VVSESIPGNPERILNVSGPLDAVS 59
Query: 139 QAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP--DMGNNPLAG 196
+A I + D P ++P G + +F + NS MG+ G
Sbjct: 60 KAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSIIGKQGAKIKEI 110
Query: 197 LAALGLGGNSGGGM--GGGLNAAALAALASS-QLKTNH-----------MPRNQNQNQNQ 242
A G N+ GM G ++A +A + + T + MP + N +
Sbjct: 111 QDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYVGNILIECQERMPSSTNSSYRP 170
Query: 243 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK--- 299
NR P + T+++ +PN+L+G +IGKGG+KI EIR +S + I+I +
Sbjct: 171 SNR----APRPPLSGGAQSYTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGV 226
Query: 300 -----SSEEEEDSNDRTITMTGTPDAIALAQYLI 328
S N+R + +TG P I +A L+
Sbjct: 227 TPPGMSGPAGGTENERLVIITGQPHNIQMAVQLL 260
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 38/274 (13%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I +R ++ IIG+ G + IRE SGA V V S+ +P + ER +N+ G DAV+
Sbjct: 1 MIHMRCLIVTQDASIIIGRAGKHVNEIREKSGARV-VVSESIPGNPERILNVSGPLDAVS 59
Query: 584 QAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP--DMGNNPLAG 641
+A I + D P ++P G + +F + NS MG+ G
Sbjct: 60 KAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSIIGKQGAKIKEI 110
Query: 642 LAALGLGGNSGGGM--GGGLNAAALAALASS-QLKTNH-----------MPRNQNQNQNQ 687
A G N+ GM G ++A +A + + T + MP + N +
Sbjct: 111 QDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYVGNILIECQERMPSSTNSSYRP 170
Query: 688 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK--- 744
NR P + T+++ +PN+L+G +IGKGG+KI EIR +S + I+I +
Sbjct: 171 SNR----APRPPLSGGAQSYTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGV 226
Query: 745 -----SSEEEEDSNDRTITMTGTPDAIALAQYLI 773
S N+R + +TG P I +A L+
Sbjct: 227 TPPGMSGPAGGTENERLVIITGQPHNIQMAVQLL 260
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
++ ++ +GSIIGK G +K++++ SG+++ S+ P ER+++V G D++ A
Sbjct: 87 IKFMIPNSRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIAT 146
Query: 499 SLITKNIEEFHK-------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 545
+ + E + N+ +G +Q ++ +P G IIGKGGS
Sbjct: 147 YYVGNILIECQERMPSSTNSSYRPSNRAPRPPLSGGAQSYTQQIYIPNDLVGCIIGKGGS 206
Query: 546 QIKTIRETSGASVYVASDMLPNST-------------EREVNIKGVPDAVTQAI 586
+I IR S + + + M P T ER V I G P + A+
Sbjct: 207 KINEIRHMSASQIKI---MEPGVTPPGMSGPAGGTENERLVIITGQPHNIQMAV 257
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 32/166 (19%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
+GSIIGK G +K++++ SG+++ S+ P ER+++V G D++ A + +
Sbjct: 95 RMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYVGNILI 154
Query: 62 EFHK-------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 108
E + N+ +G +Q ++ +P G IIGKGGS+I IR
Sbjct: 155 ECQERMPSSTNSSYRPSNRAPRPPLSGGAQSYTQQIYIPNDLVGCIIGKGGSKINEIRHM 214
Query: 109 SGASVYVASDMLPNST-------------EREVNIKGVPDAVTQAI 141
S + + + M P T ER V I G P + A+
Sbjct: 215 SASQIKI---MEPGVTPPGMSGPAGGTENERLVIITGQPHNIQMAV 257
>gi|392595587|gb|EIW84910.1| hypothetical protein CONPUDRAFT_117160 [Coniophora puteana
RWD-64-598 SS2]
Length = 378
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 103/172 (59%), Gaps = 9/172 (5%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 59 HMRCLIVTQDASIIIGKGGTHVNEIREKSGARVVVSESIPGNPERILNVSGPLDAVSKAF 118
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I + + G S+ + ++ ++P S+ GS+IGK GS+IK I++ SGA +
Sbjct: 119 GLIVRRINDEPFDVPSVPG----SRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARL 174
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRP 607
+ MLP STER +++ GV DA+ A Y I I++++ P YRP
Sbjct: 175 NASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEANERLPSSGNSSYRP 226
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 9/159 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 72 IIGKGGTHVNEIREKSGARVVVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 131
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGK GS+IK I++ SGA + + MLP STER
Sbjct: 132 VPSVPG----SRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTER 187
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRP 162
+++ GV DA+ A Y I I++++ P YRP
Sbjct: 188 VLSVAGVADAIHIATYYIGNILIEANERLPSSGNSSYRP 226
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S +I +R ++ IIGKGG+ + IRE SGA V V S+ +P + ER +N+ G DA
Sbjct: 55 SAMIHMRCLIVTQDASIIIGKGGTHVNEIREKSGARV-VVSESIPGNPERILNVSGPLDA 113
Query: 137 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
V++A I + D P ++P G + +F + NS MG+
Sbjct: 114 VSKAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGS 154
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S +I +R ++ IIGKGG+ + IRE SGA V V S+ +P + ER +N+ G DA
Sbjct: 55 SAMIHMRCLIVTQDASIIIGKGGTHVNEIREKSGARV-VVSESIPGNPERILNVSGPLDA 113
Query: 582 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 631
V++A I + D P ++P G + +F + NS MG+
Sbjct: 114 VSKAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGS 154
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIGK G+KI EI+ SGA R++ S S +R +++ G DAI
Sbjct: 141 VTIKFMIPNSRMGSVIGKQGSKIKEIQDASGA--RLNASEGMLPGSTERVLSVAGVADAI 198
Query: 322 ALAQYLI-NMSVELLRANLNGEGGGESNMDDFSSDNNLPS--SAPLAGLNASNPLA 374
+A Y I N+ L+ AN G S+ S P S+ + G ++S P A
Sbjct: 199 HIATYYIGNI---LIEANERLPSSGNSSYRPSSYTRRPPYTGSSYVPGYSSSQPYA 251
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G+VIGK G+KI EI+ SGA R++ S S +R +++ G DAI
Sbjct: 141 VTIKFMIPNSRMGSVIGKQGSKIKEIQDASGA--RLNASEGMLPGSTERVLSVAGVADAI 198
Query: 767 ALAQYLI-NMSVELLRANLNGEGGGESNMDDFSSDNNLPS--SAPLAGLNASNPLA 819
+A Y I N+ L+ AN G S+ S P S+ + G ++S P A
Sbjct: 199 HIATYYIGNI---LIEANERLPSSGNSSYRPSSYTRRPPYTGSSYVPGYSSSQPYA 251
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN--------- 308
QQ Q T+++ +PN+L+G +IGKGG+KI EIR +S + I+I + N
Sbjct: 282 QQLQ-TQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAPAPSGGE 340
Query: 309 -DRTITMTGTPDAIALAQYLINMSVE 333
+R + +TG P I +A L+ +E
Sbjct: 341 GERLVVITGQPANIQMAVQLLYHRLE 366
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN--------- 753
QQ Q T+++ +PN+L+G +IGKGG+KI EIR +S + I+I + N
Sbjct: 282 QQLQ-TQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAPAPSGGE 340
Query: 754 -DRTITMTGTPDAIALAQYLINMSVE 778
+R + +TG P I +A L+ +E
Sbjct: 341 GERLVVITGQPANIQMAVQLLYHRLE 366
>gi|328774304|gb|EGF84341.1| hypothetical protein BATDEDRAFT_8525 [Batrachochytrium
dendrobatidis JAM81]
Length = 343
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 7/171 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ KE G +IGK G +V +R+ + K+ +S S ERI+TV+G + ++ +A++
Sbjct: 15 LRSLVSTKEAGVVIGKGGASVANVRQIASVKVGVSKVVPSVSERILTVVGPLPNVAKAYA 74
Query: 500 LITKNIEEFHKN--QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
LI KN+ E + N +L ES I RL+V GSIIGK G++I+ I+E SGA
Sbjct: 75 LIAKNLLESTQTITSNGNLDSTEESTAI--RLLVAHQLIGSIIGKAGAKIREIQEASGAK 132
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 607
+ V+ +M+P STER V I G+ DA+ AIY I + M + A IPY P
Sbjct: 133 IVVSKEMMPQSTERVVEIYGLVDAIHIAIYHIGVCMKSDNERAAGIIPYDP 183
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 7/164 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G +IGK G +V +R+ + K+ +S S ERI+TV+G + ++ +A++LI KN+
Sbjct: 22 KEAGVVIGKGGASVANVRQIASVKVGVSKVVPSVSERILTVVGPLPNVAKAYALIAKNLL 81
Query: 62 EFHKN--QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
E + N +L ES I RL+V GSIIGK G++I+ I+E SGA + V+ +M
Sbjct: 82 ESTQTITSNGNLDSTEESTAI--RLLVAHQLIGSIIGKAGAKIREIQEASGAKIVVSKEM 139
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
+P STER V I G+ DA+ AIY I + M + A IPY P
Sbjct: 140 MPQSTERVVEIYGLVDAIHIAIYHIGVCMKSDNERAAGIIPYDP 183
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 432 NIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVI 488
N+ +T +R ++ + +GSIIGK+G +++++E SG+KI +S P ER+V +
Sbjct: 92 NLDSTEESTAIRLLVAHQLIGSIIGKAGAKIREIQEASGAKIVVSKEMMPQSTERVVEIY 151
Query: 489 GSMDSLFRAFSLI 501
G +D++ A I
Sbjct: 152 GLVDAIHIAIYHI 164
>gi|116180584|ref|XP_001220141.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185217|gb|EAQ92685.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 485
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 10/153 (6%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V K+R+ SG+K +SD ERI+TV G +D++ +AF
Sbjct: 126 HVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGIVDAVAKAF 185
Query: 499 SLITKNIEEFHKNQNKHLG--GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI + + N+ LG + S+ LRL++P GSIIGKGG++IK I+E SGA
Sbjct: 186 GLIIRTL------NNEPLGEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA 239
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ + LP STER + + GV DAV A Y +
Sbjct: 240 RLNASDSCLPLSTERSLVVMGVADAVHIATYYV 272
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 87/144 (60%), Gaps = 10/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V K+R+ SG+K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 135 EAATIIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 192
Query: 63 FHKNQNKHLG--GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
N+ LG + S+ LRL++P GSIIGKGG++IK I+E SGA + + L
Sbjct: 193 ----NNEPLGEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCL 248
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
P STER + + GV DAV A Y +
Sbjct: 249 PLSTERSLVVMGVADAVHIATYYV 272
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
G + E+ I +R ++ + + +IIGKGG + IR+ SGA V SD + ER + +
Sbjct: 117 GAHDETAWIHVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTV-SDYQKGAVERILTVS 175
Query: 132 GVPDAVTQAIYQICLIMVDSP 152
G+ DAV +A I + + P
Sbjct: 176 GIVDAVAKAFGLIIRTLNNEP 196
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
G + E+ I +R ++ + + +IIGKGG + IR+ SGA V SD + ER + +
Sbjct: 117 GAHDETAWIHVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTV-SDYQKGAVERILTVS 175
Query: 577 GVPDAVTQAIYQICLIMVDSP 597
G+ DAV +A I + + P
Sbjct: 176 GIVDAVAKAFGLIIRTLNNEP 196
>gi|389748653|gb|EIM89830.1| hypothetical protein STEHIDRAFT_118925 [Stereum hirsutum FP-91666
SS1]
Length = 304
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 106/173 (61%), Gaps = 11/173 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
MR ++ ++ IIGK+G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 1 MRCLIVTQDASIIIGKAGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFG 60
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + I + + G S+ + ++ ++P S+ GS+IGK GS+IK I++ SGA +
Sbjct: 61 LIVRRINDEPFDVPSVPG----SRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLN 116
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS----PPKGATI-PYRP 607
+ MLP STER +++ GV DA+ A Y I I++++ P G + YRP
Sbjct: 117 ASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPSAGTAMSSYRP 169
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 100/161 (62%), Gaps = 11/161 (6%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK+G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 13 IIGKAGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 72
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGK GS+IK I++ SGA + + MLP STER
Sbjct: 73 VPSVPG----SRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTER 128
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDS----PPKGATI-PYRP 162
+++ GV DA+ A Y I I++++ P G + YRP
Sbjct: 129 VLSVAGVADAIHIATYYIGNILIEAQERMPSAGTAMSSYRP 169
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
+R ++ IIGK GS + IRE SGA V V S+ +P + ER +N+ G DAV++A
Sbjct: 1 MRCLIVTQDASIIIGKAGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVSKAF 59
Query: 142 YQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
I + D P ++P G + +F + NS MG+
Sbjct: 60 GLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGS 95
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN--------DRTITM 314
T+++ +PN+L+G +IGKGG+KI EIR +S + I+I + N +R + +
Sbjct: 210 TQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAGAGGVNPAPAPGEGERLVVI 269
Query: 315 TGTPDAIALAQYLINMSVE 333
TG P I +A L+ +E
Sbjct: 270 TGPPANIQMAVQLLYHRLE 288
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN--------DRTITM 759
T+++ +PN+L+G +IGKGG+KI EIR +S + I+I + N +R + +
Sbjct: 210 TQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAGAGGVNPAPAPGEGERLVVI 269
Query: 760 TGTPDAIALAQYLINMSVE 778
TG P I +A L+ +E
Sbjct: 270 TGPPANIQMAVQLLYHRLE 288
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIGK G+KI EI+ SGA R++ S S +R +++ G DAI
Sbjct: 82 VTIKFMIPNSRMGSVIGKQGSKIKEIQDASGA--RLNASEGMLPGSTERVLSVAGVADAI 139
Query: 322 ALAQYLI-NMSVE 333
+A Y I N+ +E
Sbjct: 140 HIATYYIGNILIE 152
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G+VIGK G+KI EI+ SGA R++ S S +R +++ G DAI
Sbjct: 82 VTIKFMIPNSRMGSVIGKQGSKIKEIQDASGA--RLNASEGMLPGSTERVLSVAGVADAI 139
Query: 767 ALAQYLI-NMSVE 778
+A Y I N+ +E
Sbjct: 140 HIATYYIGNILIE 152
>gi|358398587|gb|EHK47938.1| hypothetical protein TRIATDRAFT_47313 [Trichoderma atroviride IMI
206040]
Length = 369
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 105/185 (56%), Gaps = 13/185 (7%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 40 EYAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLT 94
Query: 487 VIGSMDSLFRAFSLITKNIEEFHK--NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGG 544
+ G D++ RA++++ + + E + GNG + +L++ +Q G+IIG+ G
Sbjct: 95 ITGGCDAISRAYAIVARALLEGAPAVGMGGIVQGNGTHPI---KLLISHNQMGTIIGRQG 151
Query: 545 SQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TI 603
+IK I++TSG + +MLP STER V ++G P+ + +AI++I +VD +G T+
Sbjct: 152 LKIKHIQDTSGVRMVAQKEMLPQSTERVVEVQGTPEGIQRAIWEISKCLVDDWQRGTGTV 211
Query: 604 PYRPL 608
Y P+
Sbjct: 212 LYNPV 216
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 55 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRAYAIVARALL 114
Query: 62 EFHK--NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
E + GNG + +L++ +Q G+IIG+ G +IK I++TSG + +M
Sbjct: 115 EGAPAVGMGGIVQGNGTHPI---KLLISHNQMGTIIGRQGLKIKHIQDTSGVRMVAQKEM 171
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPL 163
LP STER V ++G P+ + +AI++I +VD +G T+ Y P+
Sbjct: 172 LPQSTERVVEVQGTPEGIQRAIWEISKCLVDDWQRGTGTVLYNPV 216
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 241 NQHNRNNRDGP----SQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
+Q + R GP + KT+++ Q Q+T V ++ G +IGKGG + ++R +G
Sbjct: 19 DQLKMDERLGPDGELAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVK 78
Query: 295 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+SK + +DR +T+TG DAI+ A ++
Sbjct: 79 AGVSKVV---QGVHDRVLTITGGCDAISRAYAIV 109
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 686 NQHNRNNRDGP----SQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 739
+Q + R GP + KT+++ Q Q+T V ++ G +IGKGG + ++R +G
Sbjct: 19 DQLKMDERLGPDGELAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVK 78
Query: 740 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+SK + +DR +T+TG DAI+ A ++
Sbjct: 79 AGVSKVV---QGVHDRVLTITGGCDAISRAYAIV 109
>gi|448081084|ref|XP_004194801.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
gi|359376223|emb|CCE86805.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
Length = 492
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +I+GK GE + +R+++ +I +S++ + PERI++V G +++ +AF LI + I
Sbjct: 137 KEASTIVGKKGEKINHIRDKANVRINVSENLKNVPERIISVRGPAENVAKAFGLIARTIL 196
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E +++ + S+ L+L+VP G IIGK G + + I ++S A + A LP
Sbjct: 197 EEPEDEPASIL----SRQYNLKLLVPHPMVGFIIGKQGVKFREIEDSSAAKLKAAEQPLP 252
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
ST+R ++I GV DA+ AIY I +M+ D K + Y P + ++
Sbjct: 253 YSTDRILSITGVGDAIHIAIYYISQVMIEHKDCLKKNKVVYYNPANYHHNNMNMMNVSMM 312
Query: 179 MQNSLMGAPDMGN-NPLAGLAALGLGGNSGGGMGGGLNAAAL--------AALASSQLKT 229
N+ M MG N L A + + N + ++S
Sbjct: 313 QPNTNMY---MGTANALTMQALKDVSNPYAHQVKQPYNFQMMFQPSVHPQHQFSASPSSP 369
Query: 230 NHMPRNQNQNQNQHNRNNRDG-----PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 284
MP Q Q ++H NN G P + + ++ +++ V N IG+VIGKGG I
Sbjct: 370 MAMPA-QTQYTDEHG-NNVIGDVIVQPPVQVGGKTDKFYQDVFVANANIGSVIGKGGHNI 427
Query: 285 FEIRKISGA-MIRISKSSEEEED-------SNDRTITMTGTPDAIALAQYLINMSV 332
+IR+ SG ++I + +N R +T+TG+ +I +A YLIN +
Sbjct: 428 KQIRENSGCTYVKIEPDQRQSIMLGGGRGLTNIRKLTLTGSLQSIQIAIYLINQRI 483
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 506
KE +I+GK GE + +R+++ +I +S++ + PERI++V G +++ +AF LI + I
Sbjct: 137 KEASTIVGKKGEKINHIRDKANVRINVSENLKNVPERIISVRGPAENVAKAFGLIARTIL 196
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E +++ + S+ L+L+VP G IIGK G + + I ++S A + A LP
Sbjct: 197 EEPEDEPASIL----SRQYNLKLLVPHPMVGFIIGKQGVKFREIEDSSAAKLKAAEQPLP 252
Query: 567 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRPLPQNAGGPGLIGNQFG 623
ST+R ++I GV DA+ AIY I +M+ D K + Y P + ++
Sbjct: 253 YSTDRILSITGVGDAIHIAIYYISQVMIEHKDCLKKNKVVYYNPANYHHNNMNMMNVSMM 312
Query: 624 MQNSLMGAPDMGN-NPLAGLAALGLGGNSGGGMGGGLNAAAL--------AALASSQLKT 674
N+ M MG N L A + + N + ++S
Sbjct: 313 QPNTNMY---MGTANALTMQALKDVSNPYAHQVKQPYNFQMMFQPSVHPQHQFSASPSSP 369
Query: 675 NHMPRNQNQNQNQHNRNNRDG-----PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
MP Q Q ++H NN G P + + ++ +++ V N IG+VIGKGG I
Sbjct: 370 MAMPA-QTQYTDEHG-NNVIGDVIVQPPVQVGGKTDKFYQDVFVANANIGSVIGKGGHNI 427
Query: 730 FEIRKISGA-MIRISKSSEEEED-------SNDRTITMTGTPDAIALAQYLINMSV 777
+IR+ SG ++I + +N R +T+TG+ +I +A YLIN +
Sbjct: 428 KQIRENSGCTYVKIEPDQRQSIMLGGGRGLTNIRKLTLTGSLQSIQIAIYLINQRI 483
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE K + H + + R+ P + +I+GK G +I IR+ + + V S+ L
Sbjct: 109 EEAPKPVSNHREKESDPTYVSFRMYCPVKEASTIVGKKGEKINHIRDKANVRINV-SENL 167
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
N ER ++++G + V +A I +++ P
Sbjct: 168 KNVPERIISVRGPAENVAKAFGLIARTILEEP 199
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 506 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 565
EE K + H + + R+ P + +I+GK G +I IR+ + + V S+ L
Sbjct: 109 EEAPKPVSNHREKESDPTYVSFRMYCPVKEASTIVGKKGEKINHIRDKANVRINV-SENL 167
Query: 566 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
N ER ++++G + V +A I +++ P
Sbjct: 168 KNVPERIISVRGPAENVAKAFGLIARTILEEP 199
>gi|299753134|ref|XP_001833083.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|298410159|gb|EAU88772.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 382
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 85 HMRCLIVTQDASIIIGKGGAHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAF 144
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I + + G S+ + ++ ++P S+ GS+IGK G +IK I++ SGA +
Sbjct: 145 GLIVRRINDEPFDVPSVPG----SRAVTIKFMIPNSRMGSVIGKAGCKIKEIQDASGARL 200
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRPL 608
+ MLP STER +++ GV DA+ A Y I I++++ P YRP+
Sbjct: 201 NASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEANERLPSSNGSSYRPM 253
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 97/160 (60%), Gaps = 9/160 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 98 IIGKGGAHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 157
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGK G +IK I++ SGA + + MLP STER
Sbjct: 158 VPSVPG----SRAVTIKFMIPNSRMGSVIGKAGCKIKEIQDASGARLNASEGMLPGSTER 213
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRPL 163
+++ GV DA+ A Y I I++++ P YRP+
Sbjct: 214 VLSVAGVADAIHIATYYIGNILIEANERLPSSNGSSYRPM 253
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S I +R ++ IIGKGG+ + IRE SGA V V S+ +P + ER +N+ G DA
Sbjct: 81 SAHIHMRCLIVTQDASIIIGKGGAHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDA 139
Query: 137 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
V++A I + D P ++P G + +F + NS MG+
Sbjct: 140 VSKAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGS 180
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S I +R ++ IIGKGG+ + IRE SGA V V S+ +P + ER +N+ G DA
Sbjct: 81 SAHIHMRCLIVTQDASIIIGKGGAHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDA 139
Query: 582 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 631
V++A I + D P ++P G + +F + NS MG+
Sbjct: 140 VSKAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGS 180
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK----SSEEEEDSNDRTIT 313
QQ Q T+E+ +PN L+G +IG+GG+KI EIR +S + I+I + S +R +
Sbjct: 287 QQLQ-TQEIFIPNGLVGCIIGRGGSKINEIRHMSASQIKIMEPGAGSGGRPAPEGERLVV 345
Query: 314 MTGTPDAIALAQYLINMSVE 333
+TG P + +A L+ +E
Sbjct: 346 ITGNPPNVQMAIQLLYTRLE 365
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK----SSEEEEDSNDRTIT 758
QQ Q T+E+ +PN L+G +IG+GG+KI EIR +S + I+I + S +R +
Sbjct: 287 QQLQ-TQEIFIPNGLVGCIIGRGGSKINEIRHMSASQIKIMEPGAGSGGRPAPEGERLVV 345
Query: 759 MTGTPDAIALAQYLINMSVE 778
+TG P + +A L+ +E
Sbjct: 346 ITGNPPNVQMAIQLLYTRLE 365
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIGK G KI EI+ SGA R++ S S +R +++ G DAI
Sbjct: 167 VTIKFMIPNSRMGSVIGKAGCKIKEIQDASGA--RLNASEGMLPGSTERVLSVAGVADAI 224
Query: 322 ALAQYLI-NMSVE 333
+A Y I N+ +E
Sbjct: 225 HIATYYIGNILIE 237
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G+VIGK G KI EI+ SGA R++ S S +R +++ G DAI
Sbjct: 167 VTIKFMIPNSRMGSVIGKAGCKIKEIQDASGA--RLNASEGMLPGSTERVLSVAGVADAI 224
Query: 767 ALAQYLI-NMSVE 778
+A Y I N+ +E
Sbjct: 225 HIATYYIGNILIE 237
>gi|429858530|gb|ELA33346.1| kh domain rna-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 377
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 103/185 (55%), Gaps = 22/185 (11%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFR 496
Q +R I+ KE G IIGK+G+ V LR+E+G K +S +R++T+ G + ++ +
Sbjct: 48 QLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGEIQAISK 107
Query: 497 AFSLITKNIEE---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
A++++ + + E +N H ++L++ +Q G+IIG+ G +I
Sbjct: 108 AYAIVAQALLEGAPAMGMGGVVQNNGTH----------PIKLLISHNQMGTIIGRQGLKI 157
Query: 548 KTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYR 606
K I++ SG + +MLP STER V ++G PD + A+++IC +VD +G T+ Y
Sbjct: 158 KHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPDGIKAAVWEICKCLVDDWQRGTGTVLYN 217
Query: 607 PLPQN 611
P+ +N
Sbjct: 218 PVVRN 222
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 98/175 (56%), Gaps = 22/175 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++T+ G + ++ +A++++ + +
Sbjct: 58 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGEIQAISKAYAIVAQALL 117
Query: 62 E---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
E +N H ++L++ +Q G+IIG+ G +IK I++ SG
Sbjct: 118 EGAPAMGMGGVVQNNGTH----------PIKLLISHNQMGTIIGRQGLKIKHIQDVSGVR 167
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQN 166
+ +MLP STER V ++G PD + A+++IC +VD +G T+ Y P+ +N
Sbjct: 168 MVAQKEMLPQSTERIVEVQGTPDGIKAAVWEICKCLVDDWQRGTGTVLYNPVVRN 222
>gi|340522569|gb|EGR52802.1| predicted protein [Trichoderma reesei QM6a]
Length = 369
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 27/192 (14%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 41 EYAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLT 95
Query: 487 VIGSMDSLFRAFSLITKNIEE---------FHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
+ G D++ RA++++ + + E +N H ++L++ +Q G
Sbjct: 96 ITGGCDAISRAYAIVARALLEGAPVVGMGGVVQNNGTH----------PIKLLISHNQMG 145
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+IIG+ G +IK I++ SG + DMLP STER V ++G P+ + +AI++I +VD
Sbjct: 146 TIIGRQGLKIKHIQDVSGVRMVAQKDMLPQSTERIVEVQGTPEGIQRAIWEISKCLVDDW 205
Query: 598 PKGA-TIPYRPL 608
+G T+ Y P+
Sbjct: 206 QRGTGTVLYNPV 217
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 95/172 (55%), Gaps = 22/172 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G D++ RA++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRAYAIVARALL 115
Query: 62 E---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
E +N H ++L++ +Q G+IIG+ G +IK I++ SG
Sbjct: 116 EGAPVVGMGGVVQNNGTH----------PIKLLISHNQMGTIIGRQGLKIKHIQDVSGVR 165
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPL 163
+ DMLP STER V ++G P+ + +AI++I +VD +G T+ Y P+
Sbjct: 166 MVAQKDMLPQSTERIVEVQGTPEGIQRAIWEISKCLVDDWQRGTGTVLYNPV 217
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 241 NQHNRNNRDGP----SQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
+Q + R GP + KT+++ Q Q+T V ++ G +IGKGG + ++R +G
Sbjct: 20 DQLKMDERLGPDGELAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVK 79
Query: 295 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+SK + +DR +T+TG DAI+ A ++
Sbjct: 80 AGVSKVV---QGVHDRVLTITGGCDAISRAYAIV 110
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 686 NQHNRNNRDGP----SQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 739
+Q + R GP + KT+++ Q Q+T V ++ G +IGKGG + ++R +G
Sbjct: 20 DQLKMDERLGPDGELAPKTDEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVK 79
Query: 740 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+SK + +DR +T+TG DAI+ A ++
Sbjct: 80 AGVSKVV---QGVHDRVLTITGGCDAISRAYAIV 110
>gi|336367212|gb|EGN95557.1| hypothetical protein SERLA73DRAFT_186638 [Serpula lacrymans var.
lacrymans S7.3]
Length = 370
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 99/158 (62%), Gaps = 6/158 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 69 HMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAF 128
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I + + G S+ + ++ ++P S+ GS+IGK GS+IK I++ SGA +
Sbjct: 129 GLIVRRINDEPFDVPSVPG----SRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARL 184
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
+ MLP STER +++ GV DA+ A Y I I++++
Sbjct: 185 NASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEA 222
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 93/145 (64%), Gaps = 6/145 (4%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 82 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 141
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGK GS+IK I++ SGA + + MLP STER
Sbjct: 142 VPSVPG----SRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTER 197
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDS 151
+++ GV DA+ A Y I I++++
Sbjct: 198 VLSVAGVADAIHIATYYIGNILIEA 222
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 56/300 (18%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV+
Sbjct: 67 MIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVS 125
Query: 139 QAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP--DMGNNPLAG 196
+A I + D P ++P G + +F + NS MG+ G+
Sbjct: 126 KAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSVIGKQGSKIKEI 176
Query: 197 LAALGLGGNSGGGM--GGGLNAAALAALASS-QLKTNH-----------MPRNQNQNQNQ 242
A G N+ GM G ++A +A + + T + MP + + +
Sbjct: 177 QDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPSSSHSSYRP 236
Query: 243 HNRNNRDGPSQKTNQ-------------------QQNQITKEMTVPNELIGAVIGKGGTK 283
+ +R P Q ++ QQ Q T+++ +PN+L+G +IGKGG+K
Sbjct: 237 SSNPSRRAPYQGSSYVPGYSQPFGSGPPPPHNPPQQLQ-TQQIYIPNDLVGCIIGKGGSK 295
Query: 284 IFEIRKISGAMIRISKSSEEEEDSN----------DRTITMTGTPDAIALAQYLINMSVE 333
I EIR +S + I+I + N +R + +TG P I +A L+ +E
Sbjct: 296 INEIRHMSASQIKIMEPGAVGVGMNGAPAPTGGEGERLVVITGQPANIQMAVQLLYHRLE 355
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 56/300 (18%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV+
Sbjct: 67 MIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVS 125
Query: 584 QAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP--DMGNNPLAG 641
+A I + D P ++P G + +F + NS MG+ G+
Sbjct: 126 KAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSVIGKQGSKIKEI 176
Query: 642 LAALGLGGNSGGGM--GGGLNAAALAALASS-QLKTNH-----------MPRNQNQNQNQ 687
A G N+ GM G ++A +A + + T + MP + + +
Sbjct: 177 QDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPSSSHSSYRP 236
Query: 688 HNRNNRDGPSQKTNQ-------------------QQNQITKEMTVPNELIGAVIGKGGTK 728
+ +R P Q ++ QQ Q T+++ +PN+L+G +IGKGG+K
Sbjct: 237 SSNPSRRAPYQGSSYVPGYSQPFGSGPPPPHNPPQQLQ-TQQIYIPNDLVGCIIGKGGSK 295
Query: 729 IFEIRKISGAMIRISKSSEEEEDSN----------DRTITMTGTPDAIALAQYLINMSVE 778
I EIR +S + I+I + N +R + +TG P I +A L+ +E
Sbjct: 296 INEIRHMSASQIKIMEPGAVGVGMNGAPAPTGGEGERLVVITGQPANIQMAVQLLYHRLE 355
>gi|440636503|gb|ELR06422.1| hypothetical protein GMDG_02138 [Geomyces destructans 20631-21]
Length = 365
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
+YA Q T +R I+ KE G IIGK+G+ V LR+E+G K +S +RI+T
Sbjct: 42 DYAIAQLT-----LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRILT 96
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
+ G D++ +A++++ K + E +GG + ++L++ +Q G+IIG+ G
Sbjct: 97 ITGGCDAISKAYAIVAKALLEGAPMMG--MGGLVSTTGTHPIKLLISHNQMGTIIGRQGL 154
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ SG + +MLP STER V ++G P+ + +AI+++C ++D +G T+
Sbjct: 155 KIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQKAIWEMCKCLIDDWERGTGTVL 214
Query: 605 YRPL 608
Y P+
Sbjct: 215 YNPV 218
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 98/164 (59%), Gaps = 6/164 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +RI+T+ G D++ +A++++ K +
Sbjct: 57 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRILTITGGCDAISKAYAIVAKALL 116
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG + ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 117 EGAPMMG--MGGLVSTTGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEML 174
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPL 163
P STER V ++G P+ + +AI+++C ++D +G T+ Y P+
Sbjct: 175 PQSTERIVEVQGTPEGIQKAIWEMCKCLIDDWERGTGTVLYNPV 218
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 11/110 (10%)
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
PR N+ + R P+ N ++ Q T+ +++P++++G +IG+GG+KI EIRK SG
Sbjct: 256 PRTFNRRSDGET-AGRGVPTHDENGEEIQ-TQNISIPSDMVGCIIGRGGSKISEIRKTSG 313
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 342
A I I+K+ +D+ +R T+ G+ A A Y LL NL GE
Sbjct: 314 ARISIAKAP--HDDTGERMFTIMGSAKANETALY-------LLYENLEGE 354
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 11/110 (10%)
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
PR N+ + R P+ N ++ Q T+ +++P++++G +IG+GG+KI EIRK SG
Sbjct: 256 PRTFNRRSDGET-AGRGVPTHDENGEEIQ-TQNISIPSDMVGCIIGRGGSKISEIRKTSG 313
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 787
A I I+K+ +D+ +R T+ G+ A A Y LL NL GE
Sbjct: 314 ARISIAKAP--HDDTGERMFTIMGSAKANETALY-------LLYENLEGE 354
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 74 NGESQLIQLRLI-VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 132
NGE IQ + I +P+ G IIG+GGS+I IR+TSGA + +A ++ ER I G
Sbjct: 278 NGEE--IQTQNISIPSDMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTIMG 335
Query: 133 VPDAVTQAIY 142
A A+Y
Sbjct: 336 SAKANETALY 345
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 519 NGESQLIQLRLI-VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 577
NGE IQ + I +P+ G IIG+GGS+I IR+TSGA + +A ++ ER I G
Sbjct: 278 NGEE--IQTQNISIPSDMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTIMG 335
Query: 578 VPDAVTQAIY 587
A A+Y
Sbjct: 336 SAKANETALY 345
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 32/245 (13%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ + + +G +IG+ G KI I+ SG +R+ E S +R + + GTP+ I A
Sbjct: 137 KLLISHNQMGTIIGRQGLKIKHIQDASG--VRMVAQKEMLPQSTERIVEVQGTPEGIQKA 194
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
+ M L+ G G N + G S+P +
Sbjct: 195 IW--EMCKCLIDDWERGTGTVLYNPVVRTQTGGGQGGIRNEGREYSSPRV--------MR 244
Query: 385 TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRH 444
T GA + + SD G + G G N IQT +
Sbjct: 245 TGNGADFSQEAPRTFNRRSD-----------GETAGRGVPTHDENGEEIQTQNIS----- 288
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLI 501
+ VG IIG+ G + ++R+ SG++I I+ + T ER+ T++GS + A L+
Sbjct: 289 -IPSDMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGSAKANETALYLL 347
Query: 502 TKNIE 506
+N+E
Sbjct: 348 YENLE 352
>gi|147903924|ref|NP_001080563.1| heterogeneous nuclear ribonucleoprotein K [Xenopus laevis]
gi|27882469|gb|AAH44711.1| Hnrpk protein [Xenopus laevis]
Length = 399
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIG 489
+ + T + +R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++
Sbjct: 30 FKRSRNTDLMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSMSA 89
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
++++ I +EE+ +H GN +LRL++ S G IIG G++IK
Sbjct: 90 DIETIGEILKKIIPTLEEY-----QHFKGNDFD--CELRLLIHQSLAGGIIGVKGAKIKE 142
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG T PY P
Sbjct: 143 LREKTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKVILDLISESPVKGRTQPYDP 200
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 46 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSMSADIETIGEILKKIIPTL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H GN +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 106 EEY-----QHFKGNDFD--CELRLLIHQSLAGGIIGVKGAKIKELREKTQTTIKLFQECC 158
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG T PY P
Sbjct: 159 PHSTDRVVLIGGKPDRVVECIKVILDLISESPVKGRTQPYDP 200
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T ++T+P +L G++IGKGG +I +IR SGA I+I E E S+DR IT+TGT D I
Sbjct: 321 VTTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSDDRIITITGTQDQI 377
Query: 322 ALAQYLINMSVE 333
AQ+L+ SV+
Sbjct: 378 QNAQFLLQNSVK 389
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T ++T+P +L G++IGKGG +I +IR SGA I+I E E S+DR IT+TGT D I
Sbjct: 321 VTTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSDDRIITITGTQDQI 377
Query: 767 ALAQYLINMSVE 778
AQ+L+ SV+
Sbjct: 378 QNAQFLLQNSVK 389
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
++ ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 320 VVTTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQ 378
Query: 139 QAIY 142
A +
Sbjct: 379 NAQF 382
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
++ ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 320 VVTTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQ 378
Query: 584 QAIY 587
A +
Sbjct: 379 NAQF 382
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ ++++F
Sbjct: 333 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQIQNAQFLLQNSVKQFS 392
Query: 65 KN 66
++
Sbjct: 393 ED 394
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ ++++F
Sbjct: 333 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQIQNAQFLLQNSVKQFS 392
Query: 510 KN 511
++
Sbjct: 393 ED 394
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 14/186 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K GSIIGK G+ + KLR + + I + D PER++T+ +D++ + +
Sbjct: 23 VRLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPDCPGPERMLTLSSDLDTICNIVTDV 82
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
N+EE GG + LR+++ SQ G +IGK G +IK +RE +GA + +
Sbjct: 83 VPNLEEN--------GGRVNGNELDLRMMIHQSQAGCVIGKAGYKIKELREKTGARIKIF 134
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP------LPQNAGGP 615
S++ P ST+R + I G P +I +I ++ +P KG PY P + GG
Sbjct: 135 SNVAPQSTDRIIQIVGEPSKCVDSIREIITLIKSNPIKGIVNPYDPHNYDDYYAEEYGGW 194
Query: 616 GLIGNQ 621
G GN+
Sbjct: 195 GNAGNE 200
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K GSIIGK G+ + KLR + + I + D PER++T+ +D++ + + N+EE
Sbjct: 30 KVAGSIIGKGGQNITKLRSQYKASITVPDCPGPERMLTLSSDLDTICNIVTDVVPNLEEN 89
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
GG + LR+++ SQ G +IGK G +IK +RE +GA + + S++ P S
Sbjct: 90 --------GGRVNGNELDLRMMIHQSQAGCVIGKAGYKIKELREKTGARIKIFSNVAPQS 141
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP------LPQNAGGPGLIGNQ 176
T+R + I G P +I +I ++ +P KG PY P + GG G GN+
Sbjct: 142 TDRIIQIVGEPSKCVDSIREIITLIKSNPIKGIVNPYDPHNYDDYYAEEYGGWGNAGNE 200
>gi|406866101|gb|EKD19141.1| KH domain RNA-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 372
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFR 496
Q +R I+ KE G IIGK+G+ V LR+E+G+K +S +R++T+ G +++ +
Sbjct: 48 QLTLRAIVSSKEAGVIIGKAGKNVADLRDETGAKAGVSKVVQGVHDRVLTIAGGCEAISK 107
Query: 497 AFSLITKNIEEFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
A++++ + + E +GG S ++L++ +Q G+IIG+ G +IK I++ SG
Sbjct: 108 AYAIVARALLEGAPQMG--MGGVVSTSGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASG 165
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPL 608
+ +MLP STER V I+G P+ + +AI++IC ++D +G T+ Y P+
Sbjct: 166 VRMVAQKEMLPQSTERIVEIQGTPEGIQKAIWEICKCLIDDWQRGTGTVLYNPV 219
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 99/164 (60%), Gaps = 6/164 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G+K +S +R++T+ G +++ +A++++ + +
Sbjct: 58 KEAGVIIGKAGKNVADLRDETGAKAGVSKVVQGVHDRVLTIAGGCEAISKAYAIVARALL 117
Query: 62 EFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 118 EGAPQMG--MGGVVSTSGTHPIKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEML 175
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPL 163
P STER V I+G P+ + +AI++IC ++D +G T+ Y P+
Sbjct: 176 PQSTERIVEIQGTPEGIQKAIWEICKCLIDDWQRGTGTVLYNPV 219
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
PR N ++ + R P+ N ++ Q T+ +++P++++G +IG+ G+KI EIRK SG
Sbjct: 262 PRTYNSRRSNSDAGQRGPPTHDENGEEYQ-TQNISIPSDMVGCIIGRAGSKISEIRKSSG 320
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLRANLN 340
A I I+K+ +D+ +R T+ GT A A YL+ N+ E +R + N
Sbjct: 321 ARISIAKAP--HDDTGERMFTIMGTTKANEAALYLLYENLEAEKMRRSQN 368
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
PR N ++ + R P+ N ++ Q T+ +++P++++G +IG+ G+KI EIRK SG
Sbjct: 262 PRTYNSRRSNSDAGQRGPPTHDENGEEYQ-TQNISIPSDMVGCIIGRAGSKISEIRKSSG 320
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI--NMSVELLRANLN 785
A I I+K+ +D+ +R T+ GT A A YL+ N+ E +R + N
Sbjct: 321 ARISIAKAP--HDDTGERMFTIMGTTKANEAALYLLYENLEAEKMRRSQN 368
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
NGE Q + +P+ G IIG+ GS+I IR++SGA + +A ++ ER I G
Sbjct: 285 NGEEYQTQ-NISIPSDMVGCIIGRAGSKISEIRKSSGARISIAKAPHDDTGERMFTIMGT 343
Query: 134 PDAVTQAIY 142
A A+Y
Sbjct: 344 TKANEAALY 352
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
NGE Q + +P+ G IIG+ GS+I IR++SGA + +A ++ ER I G
Sbjct: 285 NGEEYQTQ-NISIPSDMVGCIIGRAGSKISEIRKSSGARISIAKAPHDDTGERMFTIMGT 343
Query: 579 PDAVTQAIY 587
A A+Y
Sbjct: 344 TKANEAALY 352
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNI-- 60
VG IIG++G + ++R+ SG++I I+ + T ER+ T++G+ + A L+ +N+
Sbjct: 301 VGCIIGRAGSKISEIRKSSGARISIAKAPHDDTGERMFTIMGTTKANEAALYLLYENLEA 360
Query: 61 EEFHKNQN 68
E+ ++QN
Sbjct: 361 EKMRRSQN 368
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNI-- 505
VG IIG++G + ++R+ SG++I I+ + T ER+ T++G+ + A L+ +N+
Sbjct: 301 VGCIIGRAGSKISEIRKSSGARISIAKAPHDDTGERMFTIMGTTKANEAALYLLYENLEA 360
Query: 506 EEFHKNQN 513
E+ ++QN
Sbjct: 361 EKMRRSQN 368
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 75 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 134
GESQL LR IV + + G IIGK G + +R+ +GA V S ++ +R + I G
Sbjct: 45 GESQLT-LRAIVSSKEAGVIIGKAGKNVADLRDETGAKAGV-SKVVQGVHDRVLTIAGGC 102
Query: 135 DAVTQAIYQICLIMVDSPPK 154
+A+++A + +++ P+
Sbjct: 103 EAISKAYAIVARALLEGAPQ 122
>gi|325093144|gb|EGC46454.1| KH domain RNA binding protein [Ajellomyces capsulatus H88]
Length = 499
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAF 197
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 198 GLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARL 253
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ LP STER + I GV DAV A Y + + +V+
Sbjct: 254 NASDSCLPLSTERTLVILGVADAVHIATYYVAVTLVE 290
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 147 EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 204
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 205 --NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPL 262
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
STER + I GV DAV A Y + + +V+
Sbjct: 263 STERTLVILGVADAVHIATYYVAVTLVE 290
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECN 477
Query: 322 ALAQYLI 328
+A Y++
Sbjct: 478 QMALYML 484
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECN 477
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 478 QMALYML 484
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 223 RLLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLVILGVADAVHIA 280
Query: 325 QYLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 281 TYYVAVTLVEQLTERFGG 298
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 223 RLLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLVILGVADAVHIA 280
Query: 770 QYLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 281 TYYVAVTLVEQLTERFGG 298
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ +++ + IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 191
Query: 136 AVTQAI 141
AV +A
Sbjct: 192 AVAKAF 197
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES I +R ++ +++ + IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 191
Query: 581 AVTQAI 586
AV +A
Sbjct: 192 AVAKAF 197
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ ++ +P G+IIGKGG++I IR SG SV ++ NS ER V I G P+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSG-SVIKINEPQDNSNERLVTITGTPECNQM 479
Query: 140 AIYQI 144
A+Y +
Sbjct: 480 ALYML 484
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ ++ +P G+IIGKGG++I IR SG SV ++ NS ER V I G P+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSG-SVIKINEPQDNSNERLVTITGTPECNQM 479
Query: 585 AIYQI 589
A+Y +
Sbjct: 480 ALYML 484
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 241 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+Q++R++ PSQ Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRSSSQPPSQHATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 360 SSAPLAGLNASNPLAAALPQL 380
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 686 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
+Q++R++ PSQ Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRSSSQPPSQHATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 804
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 805 SSAPLAGLNASNPLAAALPQL 825
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 67/345 (19%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRA 497
R ++ GS+IGK G T+ + +SG++I +S + T +RI+ V G +D + +A
Sbjct: 38 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKA 97
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
LI I + G E ++ ++RL+VP S CGSIIGKGGS IK+ E S A
Sbjct: 98 VELI---IAKLLSEIPAEDGDEAEPRM-RVRLVVPNSACGSIIGKGGSIIKSFIEESHAG 153
Query: 558 VYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP 615
+ ++ T+R V + G + AI I + D P T
Sbjct: 154 IKISPLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQT------------- 200
Query: 616 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT- 674
M AP G G G A L +A++ +
Sbjct: 201 -------------MHAP------------FSYAGVFFSGFDGIQYACVLPYVATAAYNSM 235
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMT--VPNELIGAVIGKGGTKIFEI 732
NH P N + QHN+++ IT +T V +E IG V+G+GG I EI
Sbjct: 236 NHGP-NGAAVKFQHNKDD--------------ITNSVTIGVADEHIGLVVGRGGRNIMEI 280
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+ SGA ++IS + + DR IT+TG+ AI A+ +I V
Sbjct: 281 SQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAEDMIMQKV 325
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 147/336 (43%), Gaps = 67/336 (19%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GS+IGK G T+ + +SG++I +S + T +RI+ V G +D + +A LI I
Sbjct: 47 GSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELI---IA 103
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDM 119
+ G E ++ ++RL+VP S CGSIIGKGGS IK+ E S A + ++
Sbjct: 104 KLLSEIPAEDGDEAEPRM-RVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTK 162
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
T+R V + G + AI I + D P T
Sbjct: 163 FFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQT---------------------- 200
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT-NHMPRNQNQ 238
M AP G G G A L +A++ + NH P N
Sbjct: 201 ----MHAP------------FSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGP-NGAA 243
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMT--VPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ QHN+++ IT +T V +E IG V+G+GG I EI + SGA ++
Sbjct: 244 VKFQHNKDD--------------ITNSVTIGVADEHIGLVVGRGGRNIMEISQTSGARLK 289
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
IS + + DR IT+TG+ AI A+ +I V
Sbjct: 290 ISDRGDFMSGTTDRKITITGSQRAIRAAEDMIMQKV 325
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 51/196 (26%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP-----ERIVTVIGSMDSLF 495
R+R ++ GSIIGK G +K EES + I IS T +R+VTV G+++
Sbjct: 122 RVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEEQM 181
Query: 496 RAFSLI-TKNIEEFHKNQNKHL----------------------------------GGNG 520
A LI +K ++ H +Q H G NG
Sbjct: 182 HAIDLILSKLTDDPHYSQTMHAPFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGPNG 241
Query: 521 ESQLIQ---------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNST 569
+ Q + + V G ++G+GG I I +TSGA + ++ D + +T
Sbjct: 242 AAVKFQHNKDDITNSVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGTT 301
Query: 570 EREVNIKGVPDAVTQA 585
+R++ I G A+ A
Sbjct: 302 DRKITITGSQRAIRAA 317
>gi|295673384|ref|XP_002797238.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282610|gb|EEH38176.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 495
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Query: 426 QGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPER 483
Q P+ Q +R ++ E + IGK GE V ++R SG+K +SD S ER
Sbjct: 123 QPPSQHTTQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVER 182
Query: 484 IVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
I+TV G D++ +AF LI + + N+ +S+ LRL++P GSIIGK
Sbjct: 183 ILTVSGMQDAVAKAFGLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKS 238
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
G +I+ I+E SGA + + LP STER + I GV DAV A Y + + +V+
Sbjct: 239 GVRIREIQEASGARLNASDSCLPLSTERTLIILGVADAVHIATYYVAVTLVE 290
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 147 EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 204
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 205 --NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPL 262
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
STER + I GV DAV A Y + + +V+
Sbjct: 263 STERTLIILGVADAVHIATYYVAVTLVE 290
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECN 477
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 478 QMALYMLYSRLE 489
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECN 477
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 478 QMALYMLYSRLE 489
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 224 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLIILGVADAVHIAT 281
Query: 326 YLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 282 YYVAVTLVEQLTERFGG 298
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 224 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLIILGVADAVHIAT 281
Query: 771 YLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 282 YYVAVTLVEQLTERFGG 298
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ +++ + IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 191
Query: 136 AVTQAI 141
AV +A
Sbjct: 192 AVAKAF 197
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 241 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+Q++R + PSQ T Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRASSQPPSQHTTQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 360 SSAPLAGLNASNPLAAALPQL 380
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 686 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
+Q++R + PSQ T Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRASSQPPSQHTTQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 804
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 805 SSAPLAGLNASNPLAAALPQL 825
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G+IIGKGG++I IR SG SV ++ NS ER V I G P+ A+Y
Sbjct: 424 QIFIPNDMVGAIIGKGGAKINEIRHLSG-SVIKINEPQDNSNERLVTITGTPECNQMALY 482
Query: 143 QI 144
+
Sbjct: 483 ML 484
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G+IIGKGG++I IR SG SV ++ NS ER V I G P+ A+Y
Sbjct: 424 QIFIPNDMVGAIIGKGGAKINEIRHLSG-SVIKINEPQDNSNERLVTITGTPECNQMALY 482
Query: 588 QI 589
+
Sbjct: 483 ML 484
>gi|154281643|ref|XP_001541634.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411813|gb|EDN07201.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 482
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAF 197
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 198 GLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARL 253
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ LP STER + I GV DAV A Y + + +V+
Sbjct: 254 NASDSCLPLSTERTLVILGVADAVHIATYYVAVTLVE 290
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 147 EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 204
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 205 --NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPL 262
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
STER + I GV DAV A Y + + +V+
Sbjct: 263 STERTLVILGVADAVHIATYYVAVTLVE 290
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 46/57 (80%), Gaps = 3/57 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+T P
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITVLP 474
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 46/57 (80%), Gaps = 3/57 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 763
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+T P
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITVLP 474
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 224 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLVILGVADAVHIAT 281
Query: 326 YLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 282 YYVAVTLVEQLTERFGG 298
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 224 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLVILGVADAVHIAT 281
Query: 771 YLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 282 YYVAVTLVEQLTERFGG 298
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ +++ + IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 191
Query: 136 AVTQAI 141
AV +A
Sbjct: 192 AVAKAF 197
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES I +R ++ +++ + IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 191
Query: 581 AVTQAI 586
AV +A
Sbjct: 192 AVAKAF 197
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 241 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+Q++R++ PSQ Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRSSSQPPSQHATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 360 SSAPLAGLNASNPLAAALPQL 380
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 686 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
+Q++R++ PSQ Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRSSSQPPSQHATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 804
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 805 SSAPLAGLNASNPLAAALPQL 825
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
>gi|261195190|ref|XP_002623999.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239587871|gb|EEQ70514.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239610640|gb|EEQ87627.1| KH domain RNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327348926|gb|EGE77783.1| KH domain RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 496
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 139 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAF 198
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 199 GLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARL 254
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ LP STER + I GV DAV A Y + + +V+
Sbjct: 255 NASDSCLPLSTERTLVILGVADAVHIATYYVAVTLVE 291
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 148 EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 205
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 206 --NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPL 263
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
STER + I GV DAV A Y + + +V+
Sbjct: 264 STERTLVILGVADAVHIATYYVAVTLVE 291
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+
Sbjct: 422 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECN 478
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 479 QMALYMLYSRLE 490
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+
Sbjct: 422 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECN 478
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 479 QMALYMLYSRLE 490
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 225 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLVILGVADAVHIAT 282
Query: 326 YLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 283 YYVAVTLVEQLTERFGG 299
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 225 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLVILGVADAVHIAT 282
Query: 771 YLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 283 YYVAVTLVEQLTERFGG 299
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ +++ + IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 134 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 192
Query: 136 AVTQAIYQICLIMVDSP 152
AV +A I + + P
Sbjct: 193 AVAKAFGLIIRTLNNEP 209
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 27/141 (19%)
Query: 241 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+Q++R++ PSQ+ Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 116 SQNDRSSSQPPSQQATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 175
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 176 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 209
Query: 360 SSAPLAGLNASNPLAAALPQL 380
AP + + PL +P L
Sbjct: 210 LEAPSTAQSKTYPLRLLIPHL 230
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 27/141 (19%)
Query: 686 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
+Q++R++ PSQ+ Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 116 SQNDRSSSQPPSQQATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 175
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 804
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 176 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 209
Query: 805 SSAPLAGLNASNPLAAALPQL 825
AP + + PL +P L
Sbjct: 210 LEAPSTAQSKTYPLRLLIPHL 230
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ ++ +P G+IIGKGG++I IR SG SV ++ NS ER V I G P+
Sbjct: 422 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSG-SVIKINEPQDNSNERLVTITGTPECNQM 480
Query: 140 AIYQI 144
A+Y +
Sbjct: 481 ALYML 485
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ ++ +P G+IIGKGG++I IR SG SV ++ NS ER V I G P+
Sbjct: 422 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSG-SVIKINEPQDNSNERLVTITGTPECNQM 480
Query: 585 AIYQI 589
A+Y +
Sbjct: 481 ALYML 485
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 164/336 (48%), Gaps = 57/336 (16%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMD----------SLFRA 52
++G +IGK G +KKLR+E+G+ I I+D ++T +R V + + +L
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALLEV 571
Query: 53 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
+++ K+ + + +G + RL++ SQ GS+IGK G+ IK IR +S AS
Sbjct: 572 VTILLKDGD--GATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSAS 629
Query: 113 VYV-ASDMLP-----NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN 166
V V SD LP T+R V I G AV AI + + D+PPK T+P P +
Sbjct: 630 VRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPK-ETVPTNPEAKT 688
Query: 167 AGGPGLIGN---QFGMQNSLMGAPDMGNNPLAGLAALGLGGN--SGGGMGGGLNAAALAA 221
A G+ GN Q + +S + A G++P + +A GL + +G GG+ A A
Sbjct: 689 AYFLGIDGNTGQQVLLPHSSVAA-VYGHSP-SSMALYGLQPHPLAGPAYAGGVLAQAPPL 746
Query: 222 LASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 281
A+ P+ + +++ EM+VP+ ++G +IGKGG
Sbjct: 747 YAN--------------------------PAARLPPMLPKVSAEMSVPSSVMGGLIGKGG 780
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
I +R +SGA I+++ S +E S +RTI GT
Sbjct: 781 FHISHMRSVSGATIKVNGS---KESSVERTILFEGT 813
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 164/336 (48%), Gaps = 57/336 (16%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMD----------SLFRA 497
++G +IGK G +KKLR+E+G+ I I+D ++T +R V + + +L
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALLEV 571
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
+++ K+ + + +G + RL++ SQ GS+IGK G+ IK IR +S AS
Sbjct: 572 VTILLKDGD--GATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSAS 629
Query: 558 VYV-ASDMLP-----NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN 611
V V SD LP T+R V I G AV AI + + D+PPK T+P P +
Sbjct: 630 VRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPK-ETVPTNPEAKT 688
Query: 612 AGGPGLIGN---QFGMQNSLMGAPDMGNNPLAGLAALGLGGN--SGGGMGGGLNAAALAA 666
A G+ GN Q + +S + A G++P + +A GL + +G GG+ A A
Sbjct: 689 AYFLGIDGNTGQQVLLPHSSVAA-VYGHSP-SSMALYGLQPHPLAGPAYAGGVLAQAPPL 746
Query: 667 LASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
A+ P+ + +++ EM+VP+ ++G +IGKGG
Sbjct: 747 YAN--------------------------PAARLPPMLPKVSAEMSVPSSVMGGLIGKGG 780
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
I +R +SGA I+++ S +E S +RTI GT
Sbjct: 781 FHISHMRSVSGATIKVNGS---KESSVERTILFEGT 813
>gi|225563195|gb|EEH11474.1| KH domain RNA binding protein [Ajellomyces capsulatus G186AR]
gi|240275775|gb|EER39288.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 495
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF
Sbjct: 138 HIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAF 197
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ +S+ LRL++P GSIIGK G +I+ I+E SGA +
Sbjct: 198 GLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARL 253
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ LP STER + I GV DAV A Y + + +V+
Sbjct: 254 NASDSCLPLSTERTLVILGVADAVHIATYYVAVTLVE 290
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 147 EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 204
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 205 --NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPL 262
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
STER + I GV DAV A Y + + +V+
Sbjct: 263 STERTLVILGVADAVHIATYYVAVTLVE 290
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECN 477
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 478 QMALYMLYSRLE 489
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECN 477
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 478 QMALYMLYSRLE 489
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 224 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLVILGVADAVHIAT 281
Query: 326 YLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 282 YYVAVTLVEQLTERFGG 298
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 224 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLVILGVADAVHIAT 281
Query: 771 YLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 282 YYVAVTLVEQLTERFGG 298
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ +++ + IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 191
Query: 136 AVTQAI 141
AV +A
Sbjct: 192 AVAKAF 197
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES I +R ++ +++ + IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 191
Query: 581 AVTQAI 586
AV +A
Sbjct: 192 AVAKAF 197
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ ++ +P G+IIGKGG++I IR SG SV ++ NS ER V I G P+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSG-SVIKINEPQDNSNERLVTITGTPECNQM 479
Query: 140 AIYQI 144
A+Y +
Sbjct: 480 ALYML 484
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ ++ +P G+IIGKGG++I IR SG SV ++ NS ER V I G P+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSG-SVIKINEPQDNSNERLVTITGTPECNQM 479
Query: 585 AIYQI 589
A+Y +
Sbjct: 480 ALYML 484
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 241 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+Q++R++ PSQ Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRSSSQPPSQHATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 360 SSAPLAGLNASNPLAAALPQL 380
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 686 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
+Q++R++ PSQ Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRSSSQPPSQHATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 804
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 805 SSAPLAGLNASNPLAAALPQL 825
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
>gi|209151855|gb|ACI33086.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 433
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI++V +D++ I
Sbjct: 46 LRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVSADIDTIGEILLKI 105
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H NG +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 106 IPTLEEY-----QHY--NGIDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 158
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
+ P ST+R V + G PD V + I I ++ ++P KG PY P
Sbjct: 159 QECCPQSTDRVVLVGGKPDRVVECIKVILDLVSEAPIKGRAQPY--------DPNFYDET 210
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGG 649
+ M + G P+ G G GG
Sbjct: 211 YDYGGFTMIYEERGRRPMGGFPMRGRGG 238
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI++V +D++ I +
Sbjct: 50 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVSADIDTIGEILLKIIPTL 109
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H NG +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 110 EEY-----QHY--NGIDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 162
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
P ST+R V + G PD V + I I ++ ++P KG PY P +
Sbjct: 163 PQSTDRVVLVGGKPDRVVECIKVILDLVSEAPIKGRAQPY--------DPNFYDETYDYG 214
Query: 181 NSLMGAPDMGNNPLAGLAALGLGG 204
M + G P+ G G GG
Sbjct: 215 GFTMIYEERGRRPMGGFPMRGRGG 238
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+ GT D I
Sbjct: 358 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITINGTQDQI 414
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 415 QNAQYLLQNSVK 426
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+ GT D I
Sbjct: 358 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITINGTQDQI 414
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 415 QNAQYLLQNSVK 426
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 357 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITINGTQDQIQ 415
Query: 139 QAIY 142
A Y
Sbjct: 416 NAQY 419
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 357 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITINGTQDQIQ 415
Query: 584 QAIY 587
A Y
Sbjct: 416 NAQY 419
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 370 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITINGTQDQIQNAQYLLQNSVKQY 428
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 370 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITINGTQDQIQNAQYLLQNSVKQY 428
>gi|226292229|gb|EEH47649.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 495
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Query: 426 QGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPER 483
Q P+ Q +R ++ E + IGK GE V ++R SG+K +SD S ER
Sbjct: 123 QPPSQHTTQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVER 182
Query: 484 IVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
I+TV G D++ +AF LI + + N+ +S+ LRL++P GSIIGK
Sbjct: 183 ILTVSGMQDAVAKAFGLIIRTL----NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKS 238
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
G +I+ I+E SGA + + LP STER + I GV DAV A Y + + +V+
Sbjct: 239 GVRIREIQEASGARLNASDSCLPLSTERTLIILGVADAVHIATYYVAVTLVE 290
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R SG+K +SD S ERI+TV G D++ +AF LI + +
Sbjct: 147 EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGMQDAVAKAFGLIIRTL-- 204
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 205 --NNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPL 262
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
STER + I GV DAV A Y + + +V+
Sbjct: 263 STERTLIILGVADAVHIATYYVAVTLVE 290
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECN 477
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 478 QMALYMLYSRLE 489
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR +SG++I+I +E +++SN+R +T+TGTP+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI---NEPQDNSNERLVTITGTPECN 477
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 478 QMALYMLYSRLE 489
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 224 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLIILGVADAVHIAT 281
Query: 326 YLINMS-VELLRANLNG 341
Y + ++ VE L G
Sbjct: 282 YYVAVTLVEQLTERFGG 298
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGK G +I EI++ SGA R++ S S +RT+ + G DA+ +A
Sbjct: 224 LLIPHLLIGSIIGKSGVRIREIQEASGA--RLNASDSCLPLSTERTLIILGVADAVHIAT 281
Query: 771 YLINMS-VELLRANLNG 786
Y + ++ VE L G
Sbjct: 282 YYVAVTLVEQLTERFGG 298
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ +++ + IGKGG + IR SGA V SD + ER + + G+ D
Sbjct: 133 ESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTV-SDYSRGAVERILTVSGMQD 191
Query: 136 AVTQAI 141
AV +A
Sbjct: 192 AVAKAF 197
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 241 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+Q++R + PSQ T Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRASSQPPSQHTTQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 360 SSAPLAGLNASNPLAAALPQL 380
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)
Query: 686 NQHNRNNRDGPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 744
+Q++R + PSQ T Q ++ I + + IGKGG + +IR++SGA +S
Sbjct: 115 SQNDRASSQPPSQHTTQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSD 174
Query: 745 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 804
S + +R +T++G DA+A A LI ++ NN P
Sbjct: 175 YS---RGAVERILTVSGMQDAVAKAFGLIIRTL-----------------------NNEP 208
Query: 805 SSAPLAGLNASNPLAAALPQL 825
AP + + PL +P L
Sbjct: 209 LEAPSTAQSKTYPLRLLIPHL 229
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G+IIGKGG++I IR SG+ + + ++ NS ER V I G P+ A+Y
Sbjct: 424 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI-NEPQDNSNERLVTITGTPECNQMALY 482
Query: 143 QI 144
+
Sbjct: 483 ML 484
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G+IIGKGG++I IR SG+ + + ++ NS ER V I G P+ A+Y
Sbjct: 424 QIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI-NEPQDNSNERLVTITGTPECNQMALY 482
Query: 588 QI 589
+
Sbjct: 483 ML 484
>gi|336379931|gb|EGO21085.1| hypothetical protein SERLADRAFT_398361 [Serpula lacrymans var.
lacrymans S7.9]
Length = 304
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 99/158 (62%), Gaps = 6/158 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
MR ++ ++ IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF
Sbjct: 3 HMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAF 62
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I + + G S+ + ++ ++P S+ GS+IGK GS+IK I++ SGA +
Sbjct: 63 GLIVRRINDEPFDVPSVPG----SRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARL 118
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
+ MLP STER +++ GV DA+ A Y I I++++
Sbjct: 119 NASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEA 156
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 93/145 (64%), Gaps = 6/145 (4%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V ++RE+SG+++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 16 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRINDEPFD 75
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ ++P S+ GS+IGK GS+IK I++ SGA + + MLP STER
Sbjct: 76 VPSVPG----SRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTER 131
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDS 151
+++ GV DA+ A Y I I++++
Sbjct: 132 VLSVAGVADAIHIATYYIGNILIEA 156
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 56/300 (18%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV+
Sbjct: 1 MIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVS 59
Query: 139 QAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP--DMGNNPLAG 196
+A I + D P ++P G + +F + NS MG+ G+
Sbjct: 60 KAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSVIGKQGSKIKEI 110
Query: 197 LAALGLGGNSGGGM--GGGLNAAALAALASS-QLKTNH-----------MPRNQNQNQNQ 242
A G N+ GM G ++A +A + + T + MP + + +
Sbjct: 111 QDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPSSSHSSYRP 170
Query: 243 HNRNNRDGPSQKTNQ-------------------QQNQITKEMTVPNELIGAVIGKGGTK 283
+ +R P Q ++ QQ Q T+++ +PN+L+G +IGKGG+K
Sbjct: 171 SSNPSRRAPYQGSSYVPGYSQPFGSGPPPPHNPPQQLQ-TQQIYIPNDLVGCIIGKGGSK 229
Query: 284 IFEIRKISGAMIRISKSSEEEEDSN----------DRTITMTGTPDAIALAQYLINMSVE 333
I EIR +S + I+I + N +R + +TG P I +A L+ +E
Sbjct: 230 INEIRHMSASQIKIMEPGAVGVGMNGAPAPTGGEGERLVVITGQPANIQMAVQLLYHRLE 289
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 56/300 (18%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I +R ++ IIGKGGS + IRE SGA V V S+ +P + ER +N+ G DAV+
Sbjct: 1 MIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV-SESIPGNPERILNVSGPLDAVS 59
Query: 584 QAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP--DMGNNPLAG 641
+A I + D P ++P G + +F + NS MG+ G+
Sbjct: 60 KAFGLIVRRINDEPFDVPSVP---------GSRAVTIKFMIPNSRMGSVIGKQGSKIKEI 110
Query: 642 LAALGLGGNSGGGM--GGGLNAAALAALASS-QLKTNH-----------MPRNQNQNQNQ 687
A G N+ GM G ++A +A + + T + MP + + +
Sbjct: 111 QDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIEAQERMPSSSHSSYRP 170
Query: 688 HNRNNRDGPSQKTNQ-------------------QQNQITKEMTVPNELIGAVIGKGGTK 728
+ +R P Q ++ QQ Q T+++ +PN+L+G +IGKGG+K
Sbjct: 171 SSNPSRRAPYQGSSYVPGYSQPFGSGPPPPHNPPQQLQ-TQQIYIPNDLVGCIIGKGGSK 229
Query: 729 IFEIRKISGAMIRISKSSEEEEDSN----------DRTITMTGTPDAIALAQYLINMSVE 778
I EIR +S + I+I + N +R + +TG P I +A L+ +E
Sbjct: 230 INEIRHMSASQIKIMEPGAVGVGMNGAPAPTGGEGERLVVITGQPANIQMAVQLLYHRLE 289
>gi|45361501|ref|NP_989327.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
gi|39794355|gb|AAH64170.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
Length = 399
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIG 489
+ + T + +R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++
Sbjct: 30 FKRSRNTDMMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISA 89
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
++++ I +EE+ +H GN +LRL++ S G IIG G++IK
Sbjct: 90 DIETIGEILKKIIPTLEEY-----QHFKGNDFD--CELRLLIHQSLAGGIIGVKGAKIKE 142
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG + PY P
Sbjct: 143 LREKTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKVILDLISESPVKGRSQPYDP 200
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 46 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H GN +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 106 EEY-----QHFKGNDFD--CELRLLIHQSLAGGIIGVKGAKIKELREKTQTTIKLFQECC 158
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG + PY P
Sbjct: 159 PHSTDRVVLIGGKPDRVVECIKVILDLISESPVKGRSQPYDP 200
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S+DR IT+TGT D I
Sbjct: 321 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSDDRIITITGTQDQI 377
Query: 322 ALAQYLINMSVE 333
AQ+L+ SV+
Sbjct: 378 QNAQFLLQNSVK 389
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S+DR IT+TGT D I
Sbjct: 321 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSDDRIITITGTQDQI 377
Query: 767 ALAQYLINMSVE 778
AQ+L+ SV+
Sbjct: 378 QNAQFLLQNSVK 389
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 320 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQ 378
Query: 139 QAIY 142
A +
Sbjct: 379 NAQF 382
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 320 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQ 378
Query: 584 QAIY 587
A +
Sbjct: 379 NAQF 382
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ ++++F
Sbjct: 333 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQIQNAQFLLQNSVKQFS 392
Query: 65 KN 66
++
Sbjct: 393 ED 394
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ ++++F
Sbjct: 333 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQIQNAQFLLQNSVKQFS 392
Query: 510 KN 511
++
Sbjct: 393 ED 394
>gi|429859891|gb|ELA34647.1| kh domain rna binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 471
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 94/170 (55%), Gaps = 6/170 (3%)
Query: 422 GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-- 479
G VP P+ + +R ++ E ++IGK GE V +R+ SG+K +SD
Sbjct: 96 GAVPATPSASASHDERDWIHIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVSDYQKG 155
Query: 480 TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
ERI+TV G +D+ +AF LI + + N+ + +S+ LRL++P GSI
Sbjct: 156 AVERILTVSGVVDAAAKAFGLIIRTL----NNEPLAEPSSAQSKTYPLRLLIPHILIGSI 211
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGKGG++I+ I+E SGA + + LP STER + + GV DAV A Y +
Sbjct: 212 IGKGGARIREIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATYYV 261
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF LI + +
Sbjct: 124 EAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSGVVDAAAKAFGLIIRTL-- 181
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + +S+ LRL++P GSIIGKGG++I+ I+E SGA + + LP
Sbjct: 182 --NNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPL 239
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
STER + + GV DAV A Y +
Sbjct: 240 STERSLVVMGVADAVHIATYYV 261
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 397 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 453
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 454 RMALYMLYSRLE 465
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 397 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 453
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 454 RMALYMLYSRLE 465
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
++ ++ Q + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R+
Sbjct: 187 AEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLPLSTERS 244
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ + G DA+ +A Y + + L LN GG
Sbjct: 245 LVVMGVADAVHIATYYVGST---LLEQLNDRFGG 275
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
++ ++ Q + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R+
Sbjct: 187 AEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLPLSTERS 244
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ + G DA+ +A Y + + L LN GG
Sbjct: 245 LVVMGVADAVHIATYYVGST---LLEQLNDRFGG 275
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E I +R ++ + + ++IGKGG + IR+ SGA V SD + ER + + GV
Sbjct: 108 HDERDWIHIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTV-SDYQKGAVERILTVSGV 166
Query: 134 PDAVTQAI 141
DA +A
Sbjct: 167 VDAAAKAF 174
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
H Q H G + L Q ++ +P G+IIGKGG +I IR+ SG SV ++ NS
Sbjct: 382 HPAQPMHGGAMPGAPLTQ-QIYIPNDMVGAIIGKGGQKINEIRQISG-SVIKINEPQDNS 439
Query: 124 TEREVNIKGVPDAVTQAIYQI 144
ER V I G + A+Y +
Sbjct: 440 NERLVTITGTEECNRMALYML 460
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
H Q H G + L Q ++ +P G+IIGKGG +I IR+ SG SV ++ NS
Sbjct: 382 HPAQPMHGGAMPGAPLTQ-QIYIPNDMVGAIIGKGGQKINEIRQISG-SVIKINEPQDNS 439
Query: 569 TEREVNIKGVPDAVTQAIYQI 589
ER V I G + A+Y +
Sbjct: 440 NERLVTITGTEECNRMALYML 460
>gi|89272931|emb|CAJ83219.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
Length = 376
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIG 489
+ + T + +R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++
Sbjct: 7 FKRSRNTDMMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISA 66
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
++++ I +EE+ +H GN +LRL++ S G IIG G++IK
Sbjct: 67 DIETIGEILKKIIPTLEEY-----QHFKGNDFD--CELRLLIHQSLAGGIIGVKGAKIKE 119
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG + PY P
Sbjct: 120 LREKTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKVILDLISESPVKGRSQPYDP 177
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 23 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 82
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H GN +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 83 EEY-----QHFKGNDFD--CELRLLIHQSLAGGIIGVKGAKIKELREKTQTTIKLFQECC 135
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG + PY P
Sbjct: 136 PHSTDRVVLIGGKPDRVVECIKVILDLISESPVKGRSQPYDP 177
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S+DR IT+TGT D I
Sbjct: 298 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSDDRIITITGTQDQI 354
Query: 322 ALAQYLINMSVE 333
AQ+L+ SV+
Sbjct: 355 QNAQFLLQNSVK 366
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S+DR IT+TGT D I
Sbjct: 298 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSDDRIITITGTQDQI 354
Query: 767 ALAQYLINMSVE 778
AQ+L+ SV+
Sbjct: 355 QNAQFLLQNSVK 366
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 297 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQ 355
Query: 139 QAIY 142
A +
Sbjct: 356 NAQF 359
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 297 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQ 355
Query: 584 QAIY 587
A +
Sbjct: 356 NAQF 359
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ ++++F
Sbjct: 310 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQIQNAQFLLQNSVKQFS 369
Query: 65 KN 66
++
Sbjct: 370 ED 371
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ ++++F
Sbjct: 310 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQIQNAQFLLQNSVKQFS 369
Query: 510 KN 511
++
Sbjct: 370 ED 371
>gi|156372967|ref|XP_001629306.1| predicted protein [Nematostella vectensis]
gi|156216303|gb|EDO37243.1| predicted protein [Nematostella vectensis]
Length = 419
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 94/169 (55%), Gaps = 13/169 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K+ G IIGK G +++LR E + + + D+++ ER++T+ S + +
Sbjct: 55 LRILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNVPDTNSNERVLTITAPRQSALDILAEV 114
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
I E Q H +++++V SQ GSIIG+ G +IK IRE SGA+V V
Sbjct: 115 VPKIGEV---QYGH----------EIQMLVQRSQVGSIIGRAGYKIKEIREGSGANVKVF 161
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQ 610
+D LPNSTER V + G + + + + + + + ++P KG I + P Q
Sbjct: 162 ADCLPNSTERVVTMSGSAETIVKCVENVLVAIANAPLKGQVILFDPSMQ 210
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 13/165 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K+ G IIGK G +++LR E + + + D+++ ER++T+ S + + I
Sbjct: 59 IQSKDAGGIIGKGGTNIRRLRTEYNAVVNVPDTNSNERVLTITAPRQSALDILAEVVPKI 118
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E Q H +++++V SQ GSIIG+ G +IK IRE SGA+V V +D L
Sbjct: 119 GEV---QYGH----------EIQMLVQRSQVGSIIGRAGYKIKEIREGSGANVKVFADCL 165
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQ 165
PNSTER V + G + + + + + + + ++P KG I + P Q
Sbjct: 166 PNSTERVVTMSGSAETIVKCVENVLVAIANAPLKGQVILFDPSMQ 210
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
+Q + ++T+P +L G++IGKGG +I IR A+I+I + SNDR IT+TG +
Sbjct: 342 DQTSTQVTIPKDLAGSIIGKGGERIKMIRNRCNAVIKI---DDPLPGSNDRIITITGNQE 398
Query: 320 AIALAQYLINMSV 332
I AQYL+ SV
Sbjct: 399 QINHAQYLLQQSV 411
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
+Q + ++T+P +L G++IGKGG +I IR A+I+I + SNDR IT+TG +
Sbjct: 342 DQTSTQVTIPKDLAGSIIGKGGERIKMIRNRCNAVIKI---DDPLPGSNDRIITITGNQE 398
Query: 765 AIALAQYLINMSV 777
I AQYL+ SV
Sbjct: 399 QINHAQYLLQQSV 411
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P GSIIGKGG +IK IR A + + D LP S +R + I G + + A Y
Sbjct: 347 QVTIPKDLAGSIIGKGGERIKMIRNRCNAVIKI-DDPLPGSNDRIITITGNQEQINHAQY 405
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+M V +G++IG+ G KI EIR+ SGA +++ ++ +S +R +TM+G+ + I
Sbjct: 128 QMLVQRSQVGSIIGRAGYKIKEIREGSGANVKV--FADCLPNSTERVVTMSGSAETI--V 183
Query: 325 QYLINMSVELLRANLNGE 342
+ + N+ V + A L G+
Sbjct: 184 KCVENVLVAIANAPLKGQ 201
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+M V +G++IG+ G KI EIR+ SGA +++ ++ +S +R +TM+G+ + I
Sbjct: 128 QMLVQRSQVGSIIGRAGYKIKEIREGSGANVKV--FADCLPNSTERVVTMSGSAETI--V 183
Query: 770 QYLINMSVELLRANLNGE 787
+ + N+ V + A L G+
Sbjct: 184 KCVENVLVAIANAPLKGQ 201
>gi|410925644|ref|XP_003976290.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Takifugu rubripes]
Length = 430
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI++V S+D++ + I
Sbjct: 46 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVNASIDTIGKILLKI 105
Query: 502 TKNIEEFHKNQNKHLGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+EE+ +H G + +S+L RL++ S G IIG G++IK +RE + ++ +
Sbjct: 106 IPTLEEY-----QHYSGIDFDSEL---RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 157
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 620
+ P+ST+R V + G P+ V + I I ++ ++P KG T PY P
Sbjct: 158 FQECCPHSTDRVVLVGGKPERVIECIKVILELVSETPIKGRTQPY--------DPNFYDE 209
Query: 621 QFGMQNSLMGAPDMGNNPLAGLAALGLGG 649
+ M D G P++G GG
Sbjct: 210 TYDYGGFTMMFEDRGRRPVSGFPIRVRGG 238
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI++V S+D++ + I +
Sbjct: 50 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVNASIDTIGKILLKIIPTL 109
Query: 61 EEFHKNQNKHLGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EE+ +H G + +S+L RL++ S G IIG G++IK +RE + ++ + +
Sbjct: 110 EEY-----QHYSGIDFDSEL---RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC 161
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
P+ST+R V + G P+ V + I I ++ ++P KG T PY P +
Sbjct: 162 CPHSTDRVVLVGGKPERVIECIKVILELVSETPIKGRTQPY--------DPNFYDETYDY 213
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGG 204
M D G P++G GG
Sbjct: 214 GGFTMMFEDRGRRPVSGFPIRVRGG 238
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR GA I+I E E S DR IT+TGT D I
Sbjct: 355 ITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI---DEPLEGSEDRIITITGTQDQI 411
Query: 322 ALAQYLINMSV 332
AQYL+ SV
Sbjct: 412 QNAQYLLQNSV 422
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR GA I+I E E S DR IT+TGT D I
Sbjct: 355 ITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI---DEPLEGSEDRIITITGTQDQI 411
Query: 767 ALAQYLINMSV 777
AQYL+ SV
Sbjct: 412 QNAQYLLQNSV 422
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR GAS+ + + L S +R + I G D +
Sbjct: 354 VITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI-DEPLEGSEDRIITITGTQDQIQ 412
Query: 139 QAIY 142
A Y
Sbjct: 413 NAQY 416
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR GAS+ + + L S +R + I G D +
Sbjct: 354 VITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI-DEPLEGSEDRIITITGTQDQIQ 412
Query: 584 QAIY 587
A Y
Sbjct: 413 NAQY 416
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R E G+ I I + + +RI+T+ G+ D + A L+ ++ ++
Sbjct: 367 GSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVRQY 425
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R E G+ I I + + +RI+T+ G+ D + A L+ ++ ++
Sbjct: 367 GSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVRQY 425
>gi|404351641|ref|NP_998156.3| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 431
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI++V +D++ I
Sbjct: 46 LRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVSADIDTIGEILLKI 105
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 106 IPTLEEY-----QHYSGTDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 158
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
+ P+ST+R V + G P+ V + I I ++ ++P KG PY P
Sbjct: 159 QECCPHSTDRVVLVGGKPERVVECIKVILELIAEAPIKGRAQPY--------DPNFYDET 210
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGG 649
+ M + G P+ G G GG
Sbjct: 211 YDYGGFTMMYEERGRRPMGGFPMRGRGG 238
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI++V +D++ I +
Sbjct: 50 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVSADIDTIGEILLKIIPTL 109
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 110 EEY-----QHYSGTDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 162
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
P+ST+R V + G P+ V + I I ++ ++P KG PY P +
Sbjct: 163 PHSTDRVVLVGGKPERVVECIKVILELIAEAPIKGRAQPY--------DPNFYDETYDYG 214
Query: 181 NSLMGAPDMGNNPLAGLAALGLGG 204
M + G P+ G G GG
Sbjct: 215 GFTMMYEERGRRPMGGFPMRGRGG 238
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 356 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 412
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 413 QNAQYLLQNSVK 424
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 356 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 412
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 413 QNAQYLLQNSVK 424
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 355 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 413
Query: 139 QAIY 142
A Y
Sbjct: 414 NAQY 417
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 355 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 413
Query: 584 QAIY 587
A Y
Sbjct: 414 NAQY 417
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 368 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 426
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 368 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 426
>gi|341896366|gb|EGT52301.1| hypothetical protein CAEBREN_06932 [Caenorhabditis brenneri]
Length = 538
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 166/368 (45%), Gaps = 62/368 (16%)
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
VP +++G VIGKGGT+I I++ S R+ ++++ + R T+ GTPD +A+A+ +
Sbjct: 60 VPEKMVGLVIGKGGTEIRLIQQTSAC--RVQMDADDQSNDGIRNCTIEGTPDQVAIAKQM 117
Query: 328 INMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKP 387
I +++ N G ES D+ + D +PS ++ ++ K
Sbjct: 118 IT---QVINRN-QGIVPTESTDDEVTEDILIPSD-----------------KIGLVIGKG 156
Query: 388 GALNALTSLSALGGL--SDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMR-- 443
G + ++ GL +++ +S G G P A T + ++
Sbjct: 157 G--ETIRTVQEQSGLRTCNVVQDSTSATGQPKPLRMSGTPTAVETAKALVTNIMNNIQGN 214
Query: 444 --------H----------IMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPE 482
H I+ G IIGK GE +K+L +E+G+KI SD ++ +
Sbjct: 215 ISMLQKSLHSDAYPARGEVIVPRLSAGMIIGKGGEMIKRLAQETGTKIQFKPDSDPNSED 274
Query: 483 RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
RI ++GS + ++RA IT+ + + KN G N Q I L VPAS+CG +IGK
Sbjct: 275 RIAVIVGSREQIYRATERITEIVNKAIKNN----GVNPNGQQI-FYLHVPASKCGLVIGK 329
Query: 543 GGSQIKTIRETSGASVYVASDM-LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
GG IK I +GA+ +A N E+ IKG + A + + + + G
Sbjct: 330 GGENIKQIERDTGATCGLAGPAEQKNDDEKVFEIKGTQFQIHHAAHLVKIKV------GE 383
Query: 602 TIPYRPLP 609
P P+P
Sbjct: 384 IAPNTPVP 391
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 15/162 (9%)
Query: 7 GSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
G IIGK GE +K+L +E+G+KI SD ++ +RI ++GS + ++RA IT+ + +
Sbjct: 241 GMIIGKGGEMIKRLAQETGTKIQFKPDSDPNSEDRIAVIVGSREQIYRATERITEIVNKA 300
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM-LPN 122
KN G N Q I L VPAS+CG +IGKGG IK I +GA+ +A N
Sbjct: 301 IKNN----GVNPNGQQI-FYLHVPASKCGLVIGKGGENIKQIERDTGATCGLAGPAEQKN 355
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
E+ IKG + A + + + + G P P+P
Sbjct: 356 DDEKVFEIKGTQFQIHHAAHLVKIKV------GEIAPNTPVP 391
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 772
VP +++G VIGKGGT+I I++ S R+ ++++ + R T+ GTPD +A+A+ +
Sbjct: 60 VPEKMVGLVIGKGGTEIRLIQQTSAC--RVQMDADDQSNDGIRNCTIEGTPDQVAIAKQM 117
Query: 773 INMSVELLRANLNGEGGGESNMDDFSSDNNLPSS 806
I +++ N G ES D+ + D +PS
Sbjct: 118 IT---QVINRN-QGIVPTESTDDEVTEDILIPSD 147
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 20/157 (12%)
Query: 5 EVGSIIGKSGETVKKLREESGSKI--YISDSSTPE---RIVTVIGSMDSLFRAFSLITK- 58
++G +IGK GET++ ++E+SG + + DS++ + + + G+ ++ A +L+T
Sbjct: 148 KIGLVIGKGGETIRTVQEQSGLRTCNVVQDSTSATGQPKPLRMSGTPTAVETAKALVTNI 207
Query: 59 ------NIEEFHKN-QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
NI K+ + GE +IVP G IIGKGG IK + + +G
Sbjct: 208 MNNIQGNISMLQKSLHSDAYPARGE-------VIVPRLSAGMIIGKGGEMIKRLAQETGT 260
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIM 148
+ D PNS +R I G + + +A +I I+
Sbjct: 261 KIQFKPDSDPNSEDRIAVIVGSREQIYRATERITEIV 297
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYI-SDSSTPE--RIVTVIGSMDSLFRAFSLITKNI 60
K VG +IGK G ++ +++ S ++ + +D + + R T+ G+ D + A +IT+ I
Sbjct: 63 KMVGLVIGKGGTEIRLIQQTSACRVQMDADDQSNDGIRNCTIEGTPDQVAIAKQMITQVI 122
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
++NQ + + ++ + +++P+ + G +IGKGG I+T++E SG +++
Sbjct: 123 ---NRNQGIVPTESTDDEVTE-DILIPSDKIGLVIGKGGETIRTVQEQSGLR---TCNVV 175
Query: 121 PNSTE-----REVNIKGVPDAVTQAIYQICLIM 148
+ST + + + G P AV A + IM
Sbjct: 176 QDSTSATGQPKPLRMSGTPTAVETAKALVTNIM 208
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC 145
VP G +IGKGG++I+ I++TS V + +D N R I+G PD V A I
Sbjct: 60 VPEKMVGLVIGKGGTEIRLIQQTSACRVQMDADDQSNDGIRNCTIEGTPDQVAIAKQMIT 119
Query: 146 LIM 148
++
Sbjct: 120 QVI 122
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
NRN P++ T+ +++T+++ +P++ IG VIGKGG I +++ SG ++
Sbjct: 123 NRNQGIVPTESTD---DEVTEDILIPSDKIGLVIGKGGETIRTVQEQSGL-----RTCNV 174
Query: 304 EEDSNDRT-----ITMTGTPDAIALAQYLI 328
+DS T + M+GTP A+ A+ L+
Sbjct: 175 VQDSTSATGQPKPLRMSGTPTAVETAKALV 204
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
NRN P++ T+ +++T+++ +P++ IG VIGKGG I +++ SG ++
Sbjct: 123 NRNQGIVPTESTD---DEVTEDILIPSDKIGLVIGKGGETIRTVQEQSGL-----RTCNV 174
Query: 749 EEDSNDRT-----ITMTGTPDAIALAQYLI 773
+DS T + M+GTP A+ A+ L+
Sbjct: 175 VQDSTSATGQPKPLRMSGTPTAVETAKALV 204
>gi|410925642|ref|XP_003976289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Takifugu rubripes]
Length = 430
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI++V S+D++ + I
Sbjct: 46 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVNASIDTIGKILLKI 105
Query: 502 TKNIEEFHKNQNKHLGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+EE+ +H G + +S+L RL++ S G IIG G++IK +RE + ++ +
Sbjct: 106 IPTLEEY-----QHYSGIDFDSEL---RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 157
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 620
+ P+ST+R V + G P+ V + I I ++ ++P KG T PY P
Sbjct: 158 FQECCPHSTDRVVLVGGKPERVIECIKVILELVSETPIKGRTQPY--------DPNFYDE 209
Query: 621 QFGMQNSLMGAPDMGNNPLAGLAALGLGG 649
+ M D G P++G GG
Sbjct: 210 TYDYGGFTMMFEDRGRRPVSGFPIRVRGG 238
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI++V S+D++ + I +
Sbjct: 50 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVNASIDTIGKILLKIIPTL 109
Query: 61 EEFHKNQNKHLGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
EE+ +H G + +S+L RL++ S G IIG G++IK +RE + ++ + +
Sbjct: 110 EEY-----QHYSGIDFDSEL---RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC 161
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
P+ST+R V + G P+ V + I I ++ ++P KG T PY P +
Sbjct: 162 CPHSTDRVVLVGGKPERVIECIKVILELVSETPIKGRTQPY--------DPNFYDETYDY 213
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGG 204
M D G P++G GG
Sbjct: 214 GGFTMMFEDRGRRPVSGFPIRVRGG 238
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR GA I+I E E S DR IT+TGT D I
Sbjct: 355 ITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI---DEPLEGSEDRIITITGTQDQI 411
Query: 322 ALAQYLINMSV 332
AQYL+ SV
Sbjct: 412 QNAQYLLQNSV 422
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR GA I+I E E S DR IT+TGT D I
Sbjct: 355 ITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI---DEPLEGSEDRIITITGTQDQI 411
Query: 767 ALAQYLINMSV 777
AQYL+ SV
Sbjct: 412 QNAQYLLQNSV 422
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR GAS+ + + L S +R + I G D +
Sbjct: 354 VITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI-DEPLEGSEDRIITITGTQDQIQ 412
Query: 139 QAIY 142
A Y
Sbjct: 413 NAQY 416
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR GAS+ + + L S +R + I G D +
Sbjct: 354 VITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI-DEPLEGSEDRIITITGTQDQIQ 412
Query: 584 QAIY 587
A Y
Sbjct: 413 NAQY 416
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R E G+ I I + + +RI+T+ G+ D + A L+ ++ ++
Sbjct: 367 GSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVRQY 425
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R E G+ I I + + +RI+T+ G+ D + A L+ ++ ++
Sbjct: 367 GSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVRQY 425
>gi|392578180|gb|EIW71308.1| hypothetical protein TREMEDRAFT_42752 [Tremella mesenterica DSM
1558]
Length = 299
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
MR ++ ++ IIGK G V +RE S +++ +S+S PERI+ V G +D++ +AF
Sbjct: 1 MRCLIVTQDASIIIGKGGAHVNDIRERSHARVTVSESIPGNPERILNVSGPLDAVAKAFG 60
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + I + + G S+ + ++ I+P S+ GS+IGK G++IK I+E SGA +
Sbjct: 61 LIVRRINDEPFDVASVPG----SRAVTIKFIIPNSRMGSVIGKQGAKIKEIQEASGARLN 116
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ MLP STER ++ GV DA+ A+Y I I+++
Sbjct: 117 ASESMLPGSTERVLSCSGVADAIHIAVYYIGTILLE 152
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 89/144 (61%), Gaps = 6/144 (4%)
Query: 9 IIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIGK G V +RE S +++ +S+S PERI+ V G +D++ +AF LI + I + +
Sbjct: 13 IIGKGGAHVNDIRERSHARVTVSESIPGNPERILNVSGPLDAVAKAFGLIVRRINDEPFD 72
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
G S+ + ++ I+P S+ GS+IGK G++IK I+E SGA + + MLP STER
Sbjct: 73 VASVPG----SRAVTIKFIIPNSRMGSVIGKQGAKIKEIQEASGARLNASESMLPGSTER 128
Query: 127 EVNIKGVPDAVTQAIYQICLIMVD 150
++ GV DA+ A+Y I I+++
Sbjct: 129 VLSCSGVADAIHIAVYYIGTILLE 152
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 264 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-----EEEDSNDRTITMTGTP 318
+++ +PN L+GA+IGKGG KI EIR S IR++ + + ++R +T+ G P
Sbjct: 214 QQIFIPNSLVGAIIGKGGAKINEIRTQSQCQIRVTDPGTPAGPGQPVNPDERLVTIQGLP 273
Query: 319 DAIALAQYLINMSVELLRANLNGE 342
IN++V+LL L E
Sbjct: 274 QN-------INIAVQLLYGRLEAE 290
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 709 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-----EEEDSNDRTITMTGTP 763
+++ +PN L+GA+IGKGG KI EIR S IR++ + + ++R +T+ G P
Sbjct: 214 QQIFIPNSLVGAIIGKGGAKINEIRTQSQCQIRVTDPGTPAGPGQPVNPDERLVTIQGLP 273
Query: 764 DAIALAQYLINMSVELLRANLNGE 787
IN++V+LL L E
Sbjct: 274 QN-------INIAVQLLYGRLEAE 290
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + +PN +G+VIGK G KI EI++ SGA R++ S S +R ++ +G DAI
Sbjct: 82 VTIKFIIPNSRMGSVIGKQGAKIKEIQEASGA--RLNASESMLPGSTERVLSCSGVADAI 139
Query: 322 ALAQYLI 328
+A Y I
Sbjct: 140 HIAVYYI 146
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + +PN +G+VIGK G KI EI++ SGA R++ S S +R ++ +G DAI
Sbjct: 82 VTIKFIIPNSRMGSVIGKQGAKIKEIQEASGA--RLNASESMLPGSTERVLSCSGVADAI 139
Query: 767 ALAQYLI 773
+A Y I
Sbjct: 140 HIAVYYI 146
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
+R ++ IIGKGG+ + IRE S A V V S+ +P + ER +N+ G DAV +A
Sbjct: 1 MRCLIVTQDASIIIGKGGAHVNDIRERSHARVTV-SESIPGNPERILNVSGPLDAVAKAF 59
Query: 142 YQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA 186
I + D P A++P G + +F + NS MG+
Sbjct: 60 GLIVRRINDEPFDVASVP---------GSRAVTIKFIIPNSRMGS 95
>gi|302414660|ref|XP_003005162.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
gi|261356231|gb|EEY18659.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
Length = 478
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Query: 422 GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-- 479
G VP A+ +R ++ E ++IGK GE V +R+ SG+K +SD
Sbjct: 97 GNVPSSTPNASTHDETAWIHIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVSDYQKG 156
Query: 480 TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
ERI+TV G +D+ +AF LI + + N+ + +S+ LRL++P GSI
Sbjct: 157 AVERILTVSGVVDASAKAFGLIIRTL----NNEPLDEPSSAQSKTYPLRLLIPHILIGSI 212
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGKGG++I+ I+E SGA + + LP STER + + GV DAV A Y +
Sbjct: 213 IGKGGARIREIQEASGARLNASDSCLPMSTERSLVVMGVADAVHIATYYV 262
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF LI + +
Sbjct: 125 EAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSGVVDASAKAFGLIIRTL-- 182
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + +S+ LRL++P GSIIGKGG++I+ I+E SGA + + LP
Sbjct: 183 --NNEPLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPM 240
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
STER + + GV DAV A Y +
Sbjct: 241 STERSLVVMGVADAVHIATYYV 262
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E+ I +R ++ + + ++IGKGG + IR+ SGA V SD + ER + + GV
Sbjct: 109 HDETAWIHIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTV-SDYQKGAVERILTVSGV 167
Query: 134 PDAVTQAIYQICLIMVDSP 152
DA +A I + + P
Sbjct: 168 VDASAKAFGLIIRTLNNEP 186
>gi|346979418|gb|EGY22870.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 477
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Query: 422 GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-- 479
G VP A+ +R ++ E ++IGK GE V +R+ SG+K +SD
Sbjct: 97 GNVPSSTPNASTHDETAWIHIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVSDYQKG 156
Query: 480 TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
ERI+TV G +D+ +AF LI + + N+ + +S+ LRL++P GSI
Sbjct: 157 AVERILTVSGVVDASAKAFGLIIRTL----NNEPLDEPSSAQSKTYPLRLLIPHILIGSI 212
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGKGG++I+ I+E SGA + + LP STER + + GV DAV A Y +
Sbjct: 213 IGKGGARIREIQEASGARLNASDSCLPMSTERSLVVMGVADAVHIATYYV 262
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF LI + +
Sbjct: 125 EAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSGVVDASAKAFGLIIRTL-- 182
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + +S+ LRL++P GSIIGKGG++I+ I+E SGA + + LP
Sbjct: 183 --NNEPLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPM 240
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
STER + + GV DAV A Y +
Sbjct: 241 STERSLVVMGVADAVHIATYYV 262
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E+ I +R ++ + + ++IGKGG + IR+ SGA V SD + ER + + GV
Sbjct: 109 HDETAWIHIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTV-SDYQKGAVERILTVSGV 167
Query: 134 PDAVTQAIYQICLIMVDSP 152
DA +A I + + P
Sbjct: 168 VDASAKAFGLIIRTLNNEP 186
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 163/336 (48%), Gaps = 57/336 (16%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMD----------SLFRA 52
++G +IGK G +KKLR+E+G+ I I+D ++T +R V + + +L
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELALLEV 572
Query: 53 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
+++ K+ + + +G + RL++ SQ GS+IGK G+ IK IR +S AS
Sbjct: 573 VTILLKDGD--GATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSAS 630
Query: 113 VYV-ASDMLP-----NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN 166
V V SD LP T+R V I G AV AI + + D+PPK T+P P +
Sbjct: 631 VRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPK-ETVPTTPEAKT 689
Query: 167 A---GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGN--SGGGMGGGLNAAALAA 221
A G G G Q + +S + A G++P + +A GL + +G GG+ A A
Sbjct: 690 AYFLGIDGKTGQQVLLPHSSVAAV-YGHSP-SSMALYGLQPHPLAGPAYAGGVLAQAPPL 747
Query: 222 LASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 281
A+ P+ + +++ EM+VP+ ++G +IGKGG
Sbjct: 748 YAN--------------------------PAARLPPMLPKVSAEMSVPSSVMGGLIGKGG 781
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
I +R +SGA I+++ S +E S +RTI GT
Sbjct: 782 FHISHMRSVSGATIKVNGS---KESSVERTILFEGT 814
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 163/336 (48%), Gaps = 57/336 (16%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMD----------SLFRA 497
++G +IGK G +KKLR+E+G+ I I+D ++T +R V + + +L
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELALLEV 572
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
+++ K+ + + +G + RL++ SQ GS+IGK G+ IK IR +S AS
Sbjct: 573 VTILLKDGD--GATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSAS 630
Query: 558 VYV-ASDMLP-----NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN 611
V V SD LP T+R V I G AV AI + + D+PPK T+P P +
Sbjct: 631 VRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPK-ETVPTTPEAKT 689
Query: 612 A---GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGN--SGGGMGGGLNAAALAA 666
A G G G Q + +S + A G++P + +A GL + +G GG+ A A
Sbjct: 690 AYFLGIDGKTGQQVLLPHSSVAAV-YGHSP-SSMALYGLQPHPLAGPAYAGGVLAQAPPL 747
Query: 667 LASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
A+ P+ + +++ EM+VP+ ++G +IGKGG
Sbjct: 748 YAN--------------------------PAARLPPMLPKVSAEMSVPSSVMGGLIGKGG 781
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
I +R +SGA I+++ S +E S +RTI GT
Sbjct: 782 FHISHMRSVSGATIKVNGS---KESSVERTILFEGT 814
>gi|195192381|ref|XP_002029601.1| GL15268 [Drosophila persimilis]
gi|194104043|gb|EDW26086.1| GL15268 [Drosophila persimilis]
Length = 91
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 313
+ QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT
Sbjct: 18 RAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTIT 73
Query: 314 MTGTPDAIALAQYLINM 330
++G PD++ALAQYLINM
Sbjct: 74 ISGNPDSVALAQYLINM 90
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
Query: 699 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 758
+ QQQ+ EMTV N+LIG +IGKGGTKI EIR+ISGAMIRIS E E + DRTIT
Sbjct: 18 RAQQQQH----EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTIT 73
Query: 759 MTGTPDAIALAQYLINM 775
++G PD++ALAQYLINM
Sbjct: 74 ISGNPDSVALAQYLINM 90
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 81 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVT 138
Q + V G IIGKGG++I IR+ SGA + + + +T+R + I G PD+V
Sbjct: 23 QHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVA 82
Query: 139 QAIYQI 144
A Y I
Sbjct: 83 LAQYLI 88
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 526 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVT 583
Q + V G IIGKGG++I IR+ SGA + + + +T+R + I G PD+V
Sbjct: 23 QHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVA 82
Query: 584 QAIYQI 589
A Y I
Sbjct: 83 LAQYLI 88
>gi|365766932|gb|EHN08421.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 413
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 170/364 (46%), Gaps = 48/364 (13%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + K I+G G T+ +++ E+ ++I IS++ PERIV V G+ D + +A+
Sbjct: 68 HLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAY 127
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I + + E H N++ NGE I + L++P G IIGK GS+++ I + S A +
Sbjct: 128 GMIVRALLEEHGNED-----NGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKL 182
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV----DSPPKGA--TIPYRPLPQNA 612
+ + + L S +R + I GVPDA+ A + I ++ +SP K +I Y+P N+
Sbjct: 183 FASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNS 242
Query: 613 -----GGPGLIGNQFGMQ----NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
P I +Q Q + L+ N P++ + M A
Sbjct: 243 VLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISS---------TXLSMATPQYTTA 293
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITKEMTVPNELIG 719
A A++ +P N DG P+ + N + +E+ + + +G
Sbjct: 294 SVANATAFQPNFVIP----------NVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVG 343
Query: 720 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVEL 779
VIGK G I +++ +G I I + E S++R +T+ GT A A LI+ +E+
Sbjct: 344 NVIGKDGKHINSVKESTGCSIII---QDPVEGSSERRLTIRGTFMASQAAIMLISNKIEI 400
Query: 780 LRAN 783
R+N
Sbjct: 401 DRSN 404
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 167/356 (46%), Gaps = 48/356 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K I+G G T+ +++ E+ ++I IS++ PERIV V G+ D + +A+ +I + +
Sbjct: 76 KHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAYGMIVRALL 135
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H N++ NGE I + L++P G IIGK GS+++ I + S A ++ + + L
Sbjct: 136 EEHGNED-----NGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL 190
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV----DSPPKGA--TIPYRPLPQNA-----GGP 170
S +R + I GVPDA+ A + I ++ +SP K +I Y+P N+ P
Sbjct: 191 LSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQP 250
Query: 171 GLIGNQFGMQ----NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ 226
I +Q Q + L+ N P++ + M A A A++
Sbjct: 251 NTIFHQRNHQYHPSDKLLSYKPNKNLPISS---------TXLSMATPQYTTASVANATAF 301
Query: 227 LKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 282
+P N DG P+ + N + +E+ + + +G VIGK G
Sbjct: 302 QPNFVIP----------NVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGK 351
Query: 283 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
I +++ +G I I + E S++R +T+ GT A A LI+ +E+ R+N
Sbjct: 352 HINSVKESTGCSIII---QDPVEGSSERRLTIRGTFMASQAAIMLISNKIEIDRSN 404
>gi|242785360|ref|XP_002480578.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218720725|gb|EED20144.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 367
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 22/178 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G++ RA+S
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGALQGCARAYS 109
Query: 500 LITKNIEE---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTI 550
++ K + E +N H +RL++ +Q G+IIG+ G +IK I
Sbjct: 110 IVAKGLLEGAPQVGMGGVVQNNGTH----------PIRLLISHNQMGTIIGRQGLKIKHI 159
Query: 551 RETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 607
++ SG + +MLP STER V ++G P+ + +A+++I ++D +G T+ Y P
Sbjct: 160 QDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNP 217
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 22/171 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G++ RA+S++ K +
Sbjct: 57 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGALQGCARAYSIVAKGLL 116
Query: 62 E---------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
E +N H +RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 117 EGAPQVGMGGVVQNNGTH----------PIRLLISHNQMGTIIGRQGLKIKHIQDASGVR 166
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
+ +MLP STER V ++G P+ + +A+++I ++D +G T+ Y P
Sbjct: 167 MVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNP 217
>gi|349576607|dbj|GAA21778.1| K7_Pbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 413
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 170/365 (46%), Gaps = 50/365 (13%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + K I+G G T+ +++ E+ ++I IS++ PERIV V G+ D + +A+
Sbjct: 68 HLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAY 127
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I + + E H N++ NGE I + L++P G IIGK GS+++ I + S A +
Sbjct: 128 GMIVRALLEEHGNED-----NGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKL 182
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV----DSPPKGA--TIPYRPLPQNA 612
+ + + L S +R + I GVPDA+ A + I ++ +SP K +I Y+P N+
Sbjct: 183 FASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNS 242
Query: 613 -----GGPGLIGNQFGMQ----NSLMGAPDMGNNPLAG-LAALGLGGNSGGGMGGGLNAA 662
P I +Q Q + L+ N P++ L ++ + + NA
Sbjct: 243 VLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVA---NAT 299
Query: 663 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITKEMTVPNELI 718
A N N DG P+ + N + +E+ + + +
Sbjct: 300 AFQP-----------------NFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFV 342
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
G VIGK G I +++ +G I I + E S++R +T+ GT A A LI+ +E
Sbjct: 343 GNVIGKDGKHINSVKESTGCSIII---QDPVEGSSERRLTIRGTFMASQAAIMLISNKIE 399
Query: 779 LLRAN 783
+ R+N
Sbjct: 400 IDRSN 404
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 167/357 (46%), Gaps = 50/357 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K I+G G T+ +++ E+ ++I IS++ PERIV V G+ D + +A+ +I + +
Sbjct: 76 KHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAYGMIVRALL 135
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H N++ NGE I + L++P G IIGK GS+++ I + S A ++ + + L
Sbjct: 136 EEHGNED-----NGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL 190
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV----DSPPKGA--TIPYRPLPQNA-----GGP 170
S +R + I GVPDA+ A + I ++ +SP K +I Y+P N+ P
Sbjct: 191 LSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQP 250
Query: 171 GLIGNQFGMQ----NSLMGAPDMGNNPLAG-LAALGLGGNSGGGMGGGLNAAALAALASS 225
I +Q Q + L+ N P++ L ++ + + NA A
Sbjct: 251 NTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVA---NATAFQP---- 303
Query: 226 QLKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITKEMTVPNELIGAVIGKGG 281
N N DG P+ + N + +E+ + + +G VIGK G
Sbjct: 304 -------------NFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDG 350
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
I +++ +G I I + E S++R +T+ GT A A LI+ +E+ R+N
Sbjct: 351 KHINSVKESTGCSIII---QDPVEGSSERRLTIRGTFMASQAAIMLISNKIEIDRSN 404
>gi|449303999|gb|EMD00007.1| hypothetical protein BAUCODRAFT_359485 [Baudoinia compniacensis
UAMH 10762]
Length = 471
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 11/188 (5%)
Query: 410 SSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREES 469
S G +G SG G +P Y N TG MR I+ E + IGK GE V ++R +
Sbjct: 121 SHAGQNGRSGSQGPMP----YHNQDETG-WLHMRAIISSAEAATTIGKGGENVSQIRRLA 175
Query: 470 GSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQL 527
G+K +S+ + ERI+TV G +D++ +AF LI + + + + +S+ L
Sbjct: 176 GAKCTVSEYTRGAVERILTVSGHVDAVAKAFGLIIRTLNQEPLEEPS----TPQSKTYPL 231
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
RL++P GSIIGK G +I+ I+E SGA + + LP STER + + GV DAV A Y
Sbjct: 232 RLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPLSTERSLVVLGVADAVHIATY 291
Query: 588 QICLIMVD 595
+ +V+
Sbjct: 292 YVGSTLVE 299
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E + IGK GE V ++R +G+K +S+ + ERI+TV G +D++ +AF LI + + +
Sbjct: 156 EAATTIGKGGENVSQIRRLAGAKCTVSEYTRGAVERILTVSGHVDAVAKAFGLIIRTLNQ 215
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+ +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 216 EPLEEPS----TPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPL 271
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
STER + + GV DAV A Y + +V+
Sbjct: 272 STERSLVVLGVADAVHIATYYVGSTLVE 299
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 64 HKNQNKHLGGNG--------ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
H QN G G E+ + +R I+ +++ + IGKGG + IR +GA V
Sbjct: 122 HAGQNGRSGSQGPMPYHNQDETGWLHMRAIISSAEAATTIGKGGENVSQIRRLAGAKCTV 181
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP------PKGATIPYRPLPQNAGG 169
S+ + ER + + G DAV +A I + P P+ T P R L +
Sbjct: 182 -SEYTRGAVERILTVSGHVDAVAKAFGLIIRTLNQEPLEEPSTPQSKTYPLRLLIPHI-- 238
Query: 170 PGLIGNQFGMQ 180
LIG+ G Q
Sbjct: 239 --LIGSIIGKQ 247
>gi|290878251|emb|CBK39310.1| Pbp2p [Saccharomyces cerevisiae EC1118]
Length = 413
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 170/365 (46%), Gaps = 50/365 (13%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + K I+G G T+ +++ E+ ++I IS++ PERIV V G+ D + +A+
Sbjct: 68 HLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAY 127
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I + + E H N++ NGE I + L++P G IIGK GS+++ I + S A +
Sbjct: 128 GMIVRALLEEHGNED-----NGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKL 182
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV----DSPPKGA--TIPYRPLPQNA 612
+ + + L S +R + I GVPDA+ A + I ++ +SP K +I Y+P N+
Sbjct: 183 FASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNS 242
Query: 613 -----GGPGLIGNQFGMQ----NSLMGAPDMGNNPLAG-LAALGLGGNSGGGMGGGLNAA 662
P I +Q Q + L+ N P++ L ++ + + NA
Sbjct: 243 VLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVA---NAT 299
Query: 663 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITKEMTVPNELI 718
A N N DG P+ + N + +E+ + + +
Sbjct: 300 AFQP-----------------NFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFV 342
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
G VIGK G I +++ +G I I + E S++R +T+ GT A A LI+ +E
Sbjct: 343 GNVIGKDGKHINSVKESTGCSIII---QDPVEGSSERRLTIRGTFMASQAAIMLISNKIE 399
Query: 779 LLRAN 783
+ R+N
Sbjct: 400 IDRSN 404
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 167/357 (46%), Gaps = 50/357 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K I+G G T+ +++ E+ ++I IS++ PERIV V G+ D + +A+ +I + +
Sbjct: 76 KHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAYGMIVRALL 135
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H N++ NGE I + L++P G IIGK GS+++ I + S A ++ + + L
Sbjct: 136 EEHGNED-----NGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL 190
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV----DSPPKGA--TIPYRPLPQNA-----GGP 170
S +R + I GVPDA+ A + I ++ +SP K +I Y+P N+ P
Sbjct: 191 LSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQP 250
Query: 171 GLIGNQFGMQ----NSLMGAPDMGNNPLAG-LAALGLGGNSGGGMGGGLNAAALAALASS 225
I +Q Q + L+ N P++ L ++ + + NA A
Sbjct: 251 NTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVA---NATAFQP---- 303
Query: 226 QLKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITKEMTVPNELIGAVIGKGG 281
N N DG P+ + N + +E+ + + +G VIGK G
Sbjct: 304 -------------NFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDG 350
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
I +++ +G I I + E S++R +T+ GT A A LI+ +E+ R+N
Sbjct: 351 KHINSVKESTGCSIII---QDPVEGSSERRLTIRGTFMASQAAIMLISNKIEIDRSN 404
>gi|398365639|ref|NP_009792.3| Pbp2p [Saccharomyces cerevisiae S288c]
gi|586350|sp|P38151.1|PBP2_YEAST RecName: Full=PAB1-binding protein 2
gi|536633|emb|CAA85196.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946618|gb|EDN64840.1| pbp1p binding protein [Saccharomyces cerevisiae YJM789]
gi|190408618|gb|EDV11883.1| PAB1-binding protein 2 [Saccharomyces cerevisiae RM11-1a]
gi|207347516|gb|EDZ73659.1| YBR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272922|gb|EEU07890.1| Pbp2p [Saccharomyces cerevisiae JAY291]
gi|285810563|tpg|DAA07348.1| TPA: Pbp2p [Saccharomyces cerevisiae S288c]
gi|323310022|gb|EGA63217.1| Pbp2p [Saccharomyces cerevisiae FostersO]
gi|323334658|gb|EGA76032.1| Pbp2p [Saccharomyces cerevisiae AWRI796]
gi|323338741|gb|EGA79957.1| Pbp2p [Saccharomyces cerevisiae Vin13]
gi|323349811|gb|EGA84026.1| Pbp2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356159|gb|EGA87964.1| Pbp2p [Saccharomyces cerevisiae VL3]
gi|392301080|gb|EIW12169.1| Pbp2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 413
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 170/365 (46%), Gaps = 50/365 (13%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + K I+G G T+ +++ E+ ++I IS++ PERIV V G+ D + +A+
Sbjct: 68 HLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAY 127
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I + + E H N++ NGE I + L++P G IIGK GS+++ I + S A +
Sbjct: 128 GMIVRALLEEHGNED-----NGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKL 182
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV----DSPPKGA--TIPYRPLPQNA 612
+ + + L S +R + I GVPDA+ A + I ++ +SP K +I Y+P N+
Sbjct: 183 FASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNS 242
Query: 613 -----GGPGLIGNQFGMQ----NSLMGAPDMGNNPLAG-LAALGLGGNSGGGMGGGLNAA 662
P I +Q Q + L+ N P++ L ++ + + NA
Sbjct: 243 VLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVA---NAT 299
Query: 663 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITKEMTVPNELI 718
A N N DG P+ + N + +E+ + + +
Sbjct: 300 AFQP-----------------NFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFV 342
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
G VIGK G I +++ +G I I + E S++R +T+ GT A A LI+ +E
Sbjct: 343 GNVIGKDGKHINSVKESTGCSIII---QDPVEGSSERRLTIRGTFMASQAAIMLISNKIE 399
Query: 779 LLRAN 783
+ R+N
Sbjct: 400 IDRSN 404
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 167/357 (46%), Gaps = 50/357 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K I+G G T+ +++ E+ ++I IS++ PERIV V G+ D + +A+ +I + +
Sbjct: 76 KHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAYGMIVRALL 135
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H N++ NGE I + L++P G IIGK GS+++ I + S A ++ + + L
Sbjct: 136 EEHGNED-----NGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL 190
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV----DSPPKGA--TIPYRPLPQNA-----GGP 170
S +R + I GVPDA+ A + I ++ +SP K +I Y+P N+ P
Sbjct: 191 LSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQP 250
Query: 171 GLIGNQFGMQ----NSLMGAPDMGNNPLAG-LAALGLGGNSGGGMGGGLNAAALAALASS 225
I +Q Q + L+ N P++ L ++ + + NA A
Sbjct: 251 NTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVA---NATAFQP---- 303
Query: 226 QLKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITKEMTVPNELIGAVIGKGG 281
N N DG P+ + N + +E+ + + +G VIGK G
Sbjct: 304 -------------NFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDG 350
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
I +++ +G I I + E S++R +T+ GT A A LI+ +E+ R+N
Sbjct: 351 KHINSVKESTGCSIII---QDPVEGSSERRLTIRGTFMASQAAIMLISNKIEIDRSN 404
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 149/344 (43%), Gaps = 95/344 (27%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 17 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 76
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 77 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 136
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT--IPYRPLPQNAG 168
++ P N ER V + G P+ V +A+ I + + P + I Y N
Sbjct: 137 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYA----NVA 190
Query: 169 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
GP + N +NP GL A LAA ++ +L
Sbjct: 191 GP--VAN---------------SNPT------------------GLTAEKLAAESAKELV 215
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
+P N L+GA++GKGG + E +
Sbjct: 216 EIAVPEN------------------------------------LVGAILGKGGKTLVEYQ 239
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+++GA I+ISK E + +R +T+TG+P A AQYLI+ V
Sbjct: 240 ELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 283
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 149/344 (43%), Gaps = 95/344 (27%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 17 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 76
Query: 507 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 77 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 136
Query: 559 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT--IPYRPLPQNAG 613
++ P N ER V + G P+ V +A+ I + + P + I Y N
Sbjct: 137 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYA----NVA 190
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
GP + N +NP GL A LAA ++ +L
Sbjct: 191 GP--VAN---------------SNPT------------------GLTAEKLAAESAKELV 215
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
+P N L+GA++GKGG + E +
Sbjct: 216 EIAVPEN------------------------------------LVGAILGKGGKTLVEYQ 239
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+++GA I+ISK E + +R +T+TG+P A AQYLI+ V
Sbjct: 240 ELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 283
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 143/355 (40%), Gaps = 113/355 (31%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+ G++IGKGG I +++K +GA I++SKS + GT + + L
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD----------FYPGTTERVCLV 57
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP-LAAALPQLAQI 383
Q G E+ LNA + +A + ++ Q
Sbjct: 58 Q-----------------GTAEA-------------------LNAVHSFIAEKVREIPQA 81
Query: 384 LTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMR 443
+TKP +N L + + P+ A ++ +
Sbjct: 82 MTKPEVVNILQPQTTMN---------------------------PDRA--------KQAK 106
Query: 444 HIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGSMDSLFRAFS 499
I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G + + +A S
Sbjct: 107 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVS 166
Query: 500 LITKNIEEFHKNQN-----------------------KHLGGNGESQLIQLRLIVPASQC 536
I + ++E ++ + + L +L+++ VP +
Sbjct: 167 AIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGLTAEKLAAESAKELVEIA--VPENLV 224
Query: 537 GSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQI 589
G+I+GKGG + +E +GA + ++ + LP + R V I G P A A Y I
Sbjct: 225 GAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLI 279
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 770 QYLINMSV 777
I V
Sbjct: 68 HSFIAEKV 75
>gi|448538474|ref|XP_003871504.1| Pbp2 RNA binding protein [Candida orthopsilosis Co 90-125]
gi|380355861|emb|CCG25380.1| Pbp2 RNA binding protein [Candida orthopsilosis]
Length = 579
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +++GK G + LRE++ KI ISD+ PERI+TV G+ +++ RAF LI + I
Sbjct: 200 KEASTVVGKQGAKINHLREKADVKIQISDNLRGVPERIITVRGTAENVARAFGLIVRTI- 258
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ + + N SQ L+L+VP + G IIGK G + + I E S A + A LP
Sbjct: 259 ---LGEPEDVPANLSSQQYNLKLLVPNAIIGYIIGKQGLKFREIEENSAAKLKAAEQPLP 315
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRP 162
+ST+R +++ GV DA+ A+Y I +++ D KG I Y P
Sbjct: 316 HSTDRVLSVLGVADAIHIAVYFIAEVVIEHKDVLKKGRVILYNP 359
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 506
KE +++GK G + LRE++ KI ISD+ PERI+TV G+ +++ RAF LI + I
Sbjct: 200 KEASTVVGKQGAKINHLREKADVKIQISDNLRGVPERIITVRGTAENVARAFGLIVRTI- 258
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+ + + N SQ L+L+VP + G IIGK G + + I E S A + A LP
Sbjct: 259 ---LGEPEDVPANLSSQQYNLKLLVPNAIIGYIIGKQGLKFREIEENSAAKLKAAEQPLP 315
Query: 567 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRP 607
+ST+R +++ GV DA+ A+Y I +++ D KG I Y P
Sbjct: 316 HSTDRVLSVLGVADAIHIAVYFIAEVVIEHKDVLKKGRVILYNP 359
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
D P+ ++QQ N ++ VPN +IG +IGK G K EI + S A ++ ++ S
Sbjct: 264 DVPANLSSQQYN---LKLLVPNAIIGYIIGKQGLKFREIEENSAAKLKAAEQPLPH--ST 318
Query: 309 DRTITMTGTPDAIALAQYLI 328
DR +++ G DAI +A Y I
Sbjct: 319 DRVLSVLGVADAIHIAVYFI 338
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 694 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
D P+ ++QQ N ++ VPN +IG +IGK G K EI + S A ++ ++ S
Sbjct: 264 DVPANLSSQQYN---LKLLVPNAIIGYIIGKQGLKFREIEENSAAKLKAAEQPLPH--ST 318
Query: 754 DRTITMTGTPDAIALAQYLI 773
DR +++ G DAI +A Y I
Sbjct: 319 DRVLSVLGVADAIHIAVYFI 338
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 118/235 (50%), Gaps = 40/235 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS--------- 490
R++ G+++GSIIG+ GE VK+LR ++ SKI I ++ ER+VT+ S
Sbjct: 45 YRYLCPGRKIGSIIGRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDD 104
Query: 491 --------MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
D+LFR + EE H ++ E+ + +RL+VP+ Q G +IGK
Sbjct: 105 SDTFVSPAQDALFRVHDRVVS--EEVHGEDSE------EASQVTVRLLVPSDQIGCVIGK 156
Query: 543 GGSQIKTIRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
GG I++IR SGA V + D LP+ S++ V I G P V +A+YQI + D+P
Sbjct: 157 GGQIIQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPS 216
Query: 599 KGATIPYRPLPQ-NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSG 652
+ + +P + G L+G GAP MG PL G G G+SG
Sbjct: 217 RSQHLLASAVPTGYSSGGSLMG-------PTSGAPIMGLAPLVGTYG-GYRGDSG 263
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 115/229 (50%), Gaps = 40/229 (17%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS--------------- 45
G+++GSIIG+ GE VK+LR ++ SKI I ++ ER+VT+ S
Sbjct: 51 GRKIGSIIGRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVS 110
Query: 46 --MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 103
D+LFR + EE H ++ E+ + +RL+VP+ Q G +IGKGG I+
Sbjct: 111 PAQDALFRVHDRVVS--EEVHGEDSE------EASQVTVRLLVPSDQIGCVIGKGGQIIQ 162
Query: 104 TIRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 159
+IR SGA V + D LP+ S++ V I G P V +A+YQI + D+P + +
Sbjct: 163 SIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLL 222
Query: 160 YRPLPQ-NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSG 207
+P + G L+G GAP MG PL G G G+SG
Sbjct: 223 ASAVPTGYSSGGSLMG-------PTSGAPIMGLAPLVGTYG-GYRGDSG 263
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 157/356 (44%), Gaps = 47/356 (13%)
Query: 243 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 302
H+R + + +++ +Q+T + VP++ IG VIGKGG I IR SGA +RI K
Sbjct: 120 HDRVVSEEVHGEDSEEASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDDH 179
Query: 303 EEED--SNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
S+D + ++G P + A Y I + D+ S +L +
Sbjct: 180 LPSCALSSDELVQISGEPSLVRKALYQIASRLH----------------DNPSRSQHLLA 223
Query: 361 SAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGG 420
SA G ++ G+L TS + + GL+ L+ G+ GG G+SG
Sbjct: 224 SAVPTGYSSG-----------------GSLMGPTSGAPIMGLAPLV--GTYGGYRGDSGD 264
Query: 421 FG-GVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS 479
+ + P + + + +R + +G +IGK G + ++R+ESG+ I + +S
Sbjct: 265 WSRSLYSAP---RDEASSKEFSLRLVCPIGNIGGVIGKGGVIINQIRQESGAAIKVDSTS 321
Query: 480 TPE--RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
E + I + + FS + ++ + + RL+VP S+ G
Sbjct: 322 AAEADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSEKVERDSGIVSFTTRLLVPTSRIG 381
Query: 538 SIIGKGGSQIKTIRETSGASVYVAS-DMLPNSTERE---VNIKGVPDAVTQAIYQI 589
+IGKGG+ I +R+ + A++ + S + LP + V I G D A+ Q+
Sbjct: 382 CLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDDEMVQIAGDLDVAKDALIQV 437
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 688 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 747
H+R + + +++ +Q+T + VP++ IG VIGKGG I IR SGA +RI K
Sbjct: 120 HDRVVSEEVHGEDSEEASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDDH 179
Query: 748 EEED--SNDRTITMTGTPDAIALAQYLI 773
S+D + ++G P + A Y I
Sbjct: 180 LPSCALSSDELVQISGEPSLVRKALYQI 207
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI-SKSSEEEEDS-NDRTITMTGTPD 764
T + VP IG +IGKGG I E+RK++ A IRI SK + + S +D + + G D
Sbjct: 369 FTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDDEMVQIAGDLD 428
Query: 765 AIALAQYLINMSVELLRANLNGEGGGES 792
A LI ++ LRANL G S
Sbjct: 429 VAKDA--LIQVTTR-LRANLFDREGAVS 453
Score = 39.7 bits (91), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 19 KLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE 76
++R+ESG+ I + +S E + I + + FS + ++ + +
Sbjct: 306 QIRQESGAAIKVDSTSAAEADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSEKVERDSG 365
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS-DMLPNSTERE---VNIKG 132
RL+VP S+ G +IGKGG+ I +R+ + A++ + S + LP + V I G
Sbjct: 366 IVSFTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDDEMVQIAG 425
Query: 133 VPDAVTQAIYQI 144
D A+ Q+
Sbjct: 426 DLDVAKDALIQV 437
>gi|310790849|gb|EFQ26382.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 471
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF
Sbjct: 113 HIRAVISSPEAATIIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSGVVDAAAKAF 172
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ + +S+ LRL++P GSIIGKGG++I+ I+E SGA +
Sbjct: 173 GLIIRTL----NNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARL 228
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ LP STER + + GV DAV A Y +
Sbjct: 229 NASDSCLPLSTERSLVVMGVADAVHIATYYV 259
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF LI + +
Sbjct: 122 EAATIIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSGVVDAAAKAFGLIIRTL-- 179
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + +S+ LRL++P GSIIGKGG++I+ I+E SGA + + LP
Sbjct: 180 --NNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPL 237
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
STER + + GV DAV A Y +
Sbjct: 238 STERSLVVMGVADAVHIATYYV 259
Score = 46.2 bits (108), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
+ E I +R ++ + + +IIGKGG + IR+ SGA V SD + ER + +
Sbjct: 104 ASHDERDWIHIRAVISSPEAATIIGKGGENVSNIRKMSGAKCTV-SDYQKGAVERILTVS 162
Query: 132 GVPDAVTQAI 141
GV DA +A
Sbjct: 163 GVVDAAAKAF 172
Score = 46.2 bits (108), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+ E I +R ++ + + +IIGKGG + IR+ SGA V SD + ER + +
Sbjct: 104 ASHDERDWIHIRAVISSPEAATIIGKGGENVSNIRKMSGAKCTV-SDYQKGAVERILTVS 162
Query: 577 GVPDAVTQAI 586
GV DA +A
Sbjct: 163 GVVDAAAKAF 172
>gi|240281620|gb|EER45123.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 275
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 111/205 (54%), Gaps = 6/205 (2%)
Query: 423 GVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SST 480
G P+GP + + +R I+ KE G IIGK+G+ V LR+E+G K +S
Sbjct: 27 GEPEGPPKTDEEYAQSTLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGV 86
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSI 539
+R++TV G + +A++++ K + E +GG + +RL++ +Q G+I
Sbjct: 87 HDRVLTVTGPLQGTAKAYAIVAKGLLEGAPQLG--MGGVASNNGTHPVRLLISHNQMGTI 144
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
IG+ G +IK I++ SG + +MLP STER V ++G P+ + +A+++I ++D +
Sbjct: 145 IGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 204
Query: 600 GA-TIPYRPLPQNAGGPGLIGNQFG 623
G T+ Y P + + G G N G
Sbjct: 205 GTGTVLYNPAVRASVGGGPPNNSLG 229
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A++++ K +
Sbjct: 53 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYAIVAKGLL 112
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG + +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 113 EGAPQLG--MGGVASNNGTHPVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQNAGGPGLIGNQFG 178
P STER V ++G P+ + +A+++I ++D +G T+ Y P + + G G N G
Sbjct: 171 PQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRASVGGGPPNNSLG 229
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 154/344 (44%), Gaps = 75/344 (21%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 45 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 104
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 105 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 164
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT--IPYRPLPQNAG 168
++ P N ER V + G P+ V +A+ I + + P + I Y N
Sbjct: 165 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISY----ANVA 218
Query: 169 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
GP N G +P A A + + G GG L A LAA ++ +L
Sbjct: 219 GPVANSNPTG-------------SPYASPA--DVLPAAAGAAGGFLTAEKLAAESAKELV 263
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
+P N L+GA++GKGG + E +
Sbjct: 264 EIAVPEN------------------------------------LVGAILGKGGKTLVEYQ 287
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+++GA I+ISK E + +R +T+TG+P A AQYLI+ V
Sbjct: 288 ELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 331
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 154/344 (44%), Gaps = 75/344 (21%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 45 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 104
Query: 507 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 105 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 164
Query: 559 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT--IPYRPLPQNAG 613
++ P N ER V + G P+ V +A+ I + + P + I Y N
Sbjct: 165 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISY----ANVA 218
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
GP N G +P A A + + G GG L A LAA ++ +L
Sbjct: 219 GPVANSNPTG-------------SPYASPA--DVLPAAAGAAGGFLTAEKLAAESAKELV 263
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
+P N L+GA++GKGG + E +
Sbjct: 264 EIAVPEN------------------------------------LVGAILGKGGKTLVEYQ 287
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+++GA I+ISK E + +R +T+TG+P A AQYLI+ V
Sbjct: 288 ELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 331
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 143/375 (38%), Gaps = 133/375 (35%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+ G++IGKGG I +++K +GA I++SKS + GT + + L
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD----------FYPGTTERVCLV 85
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP-LAAALPQLAQI 383
Q G E+ LNA + +A + ++ Q
Sbjct: 86 Q-----------------GTAEA-------------------LNAVHSFIAEKVREIPQA 109
Query: 384 LTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMR 443
+TKP +N L + + P+ A ++ +
Sbjct: 110 MTKPEVVNILQPQTTMN---------------------------PDRA--------KQAK 134
Query: 444 HIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGSMDSLFRAFS 499
I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G + + +A S
Sbjct: 135 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVS 194
Query: 500 LITKNIEEFHKNQN-------------------------------------------KHL 516
I + ++E ++ + + L
Sbjct: 195 AIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAGAAGGFLTAEKL 254
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVN 574
+L++ + VP + G+I+GKGG + +E +GA + ++ + LP + R V
Sbjct: 255 AAESAKELVE--IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT 312
Query: 575 IKGVPDAVTQAIYQI 589
I G P A A Y I
Sbjct: 313 ITGSPAATQAAQYLI 327
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN- 93
Query: 140 AIYQICLIMVDSPPKGATIP 159
A++ V P+ T P
Sbjct: 94 AVHSFIAEKVREIPQAMTKP 113
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 584
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN- 93
Query: 585 AIYQICLIMVDSPPKGATIP 604
A++ V P+ T P
Sbjct: 94 AVHSFIAEKVREIPQAMTKP 113
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
Query: 770 QYLINMSV 777
I V
Sbjct: 96 HSFIAEKV 103
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF
Sbjct: 128 HLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAF 187
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + + ++ S+ +RL++P GSIIGK G +I+ I+E S A +
Sbjct: 188 GLIVRTLNQ----EDLEAPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKL 243
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ +LPNS ER + + GV DAV A+Y + +V+
Sbjct: 244 NASDTLLPNSGERSLVVLGVADAVHIAVYYVAQTLVE 280
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF LI + + +
Sbjct: 137 EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFGLIVRTLNQ 196
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ S+ +RL++P GSIIGK G +I+ I+E S A + + +LPN
Sbjct: 197 ----EDLEAPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLPN 252
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
S ER + + GV DAV A+Y + +V+
Sbjct: 253 SGERSLVVLGVADAVHIAVYYVAQTLVE 280
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E ++SN+R +T+TGT +
Sbjct: 413 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNSNERLVTITGTQECN 469
Query: 322 ALAQYLI 328
+A Y++
Sbjct: 470 QMALYML 476
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E ++SN+R +T+TGT +
Sbjct: 413 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNSNERLVTITGTQECN 469
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 470 QMALYML 476
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 40/296 (13%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N+ + + PS T++ + +P+ LIG++IGK G +I EI++ S A +++ S
Sbjct: 195 NQEDLEAPSTSTSKA---YPMRLLIPHILIGSIIGKAGVRIREIQEASNA--KLNASDTL 249
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNGEGGGESNMDDFSSDNNLP--- 359
+S +R++ + G DA+ +A Y + + VE L G + + N +P
Sbjct: 250 LPNSGERSLVVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGGM 309
Query: 360 SSAPL----AGLNASNP--LAAALPQL--------AQILTKPGALNALTSLSALGGLSDL 405
S P AG P PQ A +PG A S G
Sbjct: 310 SVQPYVPQPAGGQYQQPNNFRRQEPQRTPAHGGYGAAPHMQPG---APVHPSPYGQPQMP 366
Query: 406 LGGGSSG----GGSGNSGGFGGVPQG--------PNYANIQTTGVQRRMRHIMQGKEVGS 453
G GS G GG G G PQG PN + G + + VG+
Sbjct: 367 YGAGSPGRAHYGGPPQQPGPYGAPQGAPVPHGGPPNQPPVSMPGQPLTQQIFIPNDMVGA 426
Query: 454 IIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 507
IIGK G + ++R+ SGS I I++ + + ER+VT+ G+ + A ++ + E
Sbjct: 427 IIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQECNQMALYMLYSRLGE 482
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N+ + + PS T++ + +P+ LIG++IGK G +I EI++ S A +++ S
Sbjct: 195 NQEDLEAPSTSTSKA---YPMRLLIPHILIGSIIGKAGVRIREIQEASNA--KLNASDTL 249
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
+S +R++ + G DA+ +A Y + + VE L G
Sbjct: 250 LPNSGERSLVVLGVADAVHIAVYYVAQTLVEQLTERFGG 288
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ + LR + S+ +IIGKGG + IR SGA V SD + ER + + G D
Sbjct: 123 ETNWLHLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTV-SDYSRGAVERILTVSGQVD 181
Query: 136 AVTQAI 141
AV++A
Sbjct: 182 AVSKAF 187
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
E+ + LR + S+ +IIGKGG + IR SGA V SD + ER + + G D
Sbjct: 123 ETNWLHLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTV-SDYSRGAVERILTVSGQVD 181
Query: 581 AVTQAI 586
AV++A
Sbjct: 182 AVSKAF 187
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
Q + ++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER V I G
Sbjct: 411 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPTDNSNERLVTITG----- 464
Query: 138 TQAIYQICLIMVDS 151
TQ Q+ L M+ S
Sbjct: 465 TQECNQMALYMLYS 478
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
Q + ++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER V I G
Sbjct: 411 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPTDNSNERLVTITG----- 464
Query: 583 TQAIYQICLIMVDS 596
TQ Q+ L M+ S
Sbjct: 465 TQECNQMALYMLYS 478
>gi|66910286|gb|AAH96867.1| Heterogeneous nuclear ribonucleoprotein K, like [Danio rerio]
gi|182889168|gb|AAI64732.1| Hnrpkl protein [Danio rerio]
Length = 431
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +++ K G++IGK G+ +K LR + + + + DSS PERI++V +D++ I
Sbjct: 46 LRVLLRSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVSADIDTIGEILLKI 105
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 106 IPTLEEY-----QHYSGTDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 158
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
+ P+ST+R V + G P+ V + I I ++ ++P KG PY P
Sbjct: 159 QECCPHSTDRVVLVGGKPERVVECIKVILELIAEAPIKGRAQPY--------DPNFYDET 210
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGG 649
+ M + G P+ G G GG
Sbjct: 211 YDYGGFTMMYEERGRRPMGGFPMRGRGG 238
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
++ K G++IGK G+ +K LR + + + + DSS PERI++V +D++ I +
Sbjct: 50 LRSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVSADIDTIGEILLKIIPTL 109
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 110 EEY-----QHYSGTDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 162
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
P+ST+R V + G P+ V + I I ++ ++P KG PY P +
Sbjct: 163 PHSTDRVVLVGGKPERVVECIKVILELIAEAPIKGRAQPY--------DPNFYDETYDYG 214
Query: 181 NSLMGAPDMGNNPLAGLAALGLGG 204
M + G P+ G G GG
Sbjct: 215 GFTMMYEERGRRPMGGFPMRGRGG 238
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 356 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 412
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 413 QNAQYLLQNSVK 424
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 356 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 412
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 413 QNAQYLLQNSVK 424
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 355 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 413
Query: 139 QAIY 142
A Y
Sbjct: 414 NAQY 417
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 355 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 413
Query: 584 QAIY 587
A Y
Sbjct: 414 NAQY 417
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 368 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 426
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 368 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 426
>gi|406866225|gb|EKD19265.1| KH domain RNA binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 545
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF
Sbjct: 121 HIRAVITSAEAATVIGKGGENVSSIRKMSGAKCTVSDYQKGAVERILTVSGVVDAAAKAF 180
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ + +S+ LRL++P GSIIGKGG +I+ I+E SGA +
Sbjct: 181 GLIIRTL----NNEPLEAPSSAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARL 236
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ LP STER + + GV DAV A Y +
Sbjct: 237 NASDSCLPLSTERSLVVLGVADAVHIATYYV 267
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF LI + +
Sbjct: 130 EAATVIGKGGENVSSIRKMSGAKCTVSDYQKGAVERILTVSGVVDAAAKAFGLIIRTL-- 187
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + +S+ LRL++P GSIIGKGG +I+ I+E SGA + + LP
Sbjct: 188 --NNEPLEAPSSAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARLNASDSCLPL 245
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
STER + + GV DAV A Y +
Sbjct: 246 STERSLVVLGVADAVHIATYYV 267
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 62/94 (65%), Gaps = 12/94 (12%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 403 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTAECN 459
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 355
+A Y++ +E +L DDF D
Sbjct: 460 QMALYMLYSRLERKAPHLK---------DDFIID 484
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 62/94 (65%), Gaps = 12/94 (12%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 403 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTAECN 459
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+A Y++ +E +L DDF D
Sbjct: 460 QMALYMLYSRLERKAPHLK---------DDFIID 484
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 207 LLIPHILIGSIIGKGGVRIREIQEASGA--RLNASDSCLPLSTERSLVVLGVADAVHIAT 264
Query: 326 YLI 328
Y +
Sbjct: 265 YYV 267
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 207 LLIPHILIGSIIGKGGVRIREIQEASGA--RLNASDSCLPLSTERSLVVLGVADAVHIAT 264
Query: 771 YLI 773
Y +
Sbjct: 265 YYV 267
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ +++ ++IGKGG + +IR+ SGA V SD + ER + + GV
Sbjct: 114 HDESGWIHIRAVITSAEAATVIGKGGENVSSIRKMSGAKCTV-SDYQKGAVERILTVSGV 172
Query: 134 PDAVTQAIYQICLIMVDSP 152
DA +A I + + P
Sbjct: 173 VDAAAKAFGLIIRTLNNEP 191
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
Q + ++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER V I G +
Sbjct: 401 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPQDNSNERLVTITGTAECN 459
Query: 138 TQAIYQI 144
A+Y +
Sbjct: 460 QMALYML 466
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
Q + ++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER V I G +
Sbjct: 401 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPQDNSNERLVTITGTAECN 459
Query: 583 TQAIYQI 589
A+Y +
Sbjct: 460 QMALYML 466
>gi|380478963|emb|CCF43298.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 469
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF
Sbjct: 112 HIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSGVVDAAAKAF 171
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ + +S+ LRL++P GSIIGKGG++I+ I+E SGA +
Sbjct: 172 GLIIRTL----NNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARL 227
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ LP STER + + GV DAV A Y +
Sbjct: 228 NASDSCLPLSTERSLVVMGVADAVHIATYYV 258
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ SG+K +SD ERI+TV G +D+ +AF LI + +
Sbjct: 121 EAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSGVVDAAAKAFGLIIRTL-- 178
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + +S+ LRL++P GSIIGKGG++I+ I+E SGA + + LP
Sbjct: 179 --NNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPL 236
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
STER + + GV DAV A Y +
Sbjct: 237 STERSLVVMGVADAVHIATYYV 258
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 395 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 451
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 452 RMALYMLYSRLE 463
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR+ISG++I+I +E +++SN+R +T+TGT +
Sbjct: 395 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI---NEPQDNSNERLVTITGTEECN 451
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 452 RMALYMLYSRLE 463
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
++ ++ Q + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R+
Sbjct: 184 AEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLPLSTERS 241
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+ + G DA+ +A Y + + L LN GG
Sbjct: 242 LVVMGVADAVHIATYYVGST---LLEQLNDRFGG 272
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
++ ++ Q + +P+ LIG++IGKGG +I EI++ SGA R++ S S +R+
Sbjct: 184 AEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLPLSTERS 241
Query: 757 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+ + G DA+ +A Y + + L LN GG
Sbjct: 242 LVVMGVADAVHIATYYVGST---LLEQLNDRFGG 272
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E I +R ++ + + ++IGKGG + IR+ SGA V SD + ER + + GV
Sbjct: 105 HDERDWIHIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTV-SDYQKGAVERILTVSGV 163
Query: 134 PDAVTQAIYQICLIMVDSP 152
DA +A I + + P
Sbjct: 164 VDAAAKAFGLIIRTLNNEP 182
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ E I +R ++ + + ++IGKGG + IR+ SGA V SD + ER + + GV
Sbjct: 105 HDERDWIHIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTV-SDYQKGAVERILTVSGV 163
Query: 579 PDAVTQAIYQICLIMVDSP 597
DA +A I + + P
Sbjct: 164 VDAAAKAFGLIIRTLNNEP 182
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
H Q H G + L Q ++ +P G+IIGKGG +I IR+ SG SV ++ NS
Sbjct: 380 HPAQPIHGGAVAGAPLTQ-QIYIPNDMVGAIIGKGGQKINEIRQISG-SVIKINEPQDNS 437
Query: 124 TEREVNIKGVPDAVTQAIYQI 144
ER V I G + A+Y +
Sbjct: 438 NERLVTITGTEECNRMALYML 458
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
H Q H G + L Q ++ +P G+IIGKGG +I IR+ SG SV ++ NS
Sbjct: 380 HPAQPIHGGAVAGAPLTQ-QIYIPNDMVGAIIGKGGQKINEIRQISG-SVIKINEPQDNS 437
Query: 569 TEREVNIKGVPDAVTQAIYQI 589
ER V I G + A+Y +
Sbjct: 438 NERLVTITGTEECNRMALYML 458
>gi|396482778|ref|XP_003841545.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
gi|312218120|emb|CBX98066.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
Length = 488
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF
Sbjct: 129 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAF 188
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + + ++ S+ +RL++P GSIIGK G +I+ I+E S A +
Sbjct: 189 GLIVRTLNQ----EDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKL 244
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ +LPNS ER + + GV DAV A+Y + +V+
Sbjct: 245 NASDTLLPNSGERSLVVLGVADAVHIAVYYVAQTLVE 281
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF LI + + +
Sbjct: 138 EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFGLIVRTLNQ 197
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ S+ +RL++P GSIIGK G +I+ I+E S A + + +LPN
Sbjct: 198 ----EDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLPN 253
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
S ER + + GV DAV A+Y + +V+
Sbjct: 254 SGERSLVVLGVADAVHIAVYYVAQTLVE 281
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG+MI+I +E ++SN+R +T+TGT +
Sbjct: 414 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSMIKI---NEPTDNSNERLVTITGTQECN 470
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 471 QMALYMLYSRLE 482
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG+MI+I +E ++SN+R +T+TGT +
Sbjct: 414 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSMIKI---NEPTDNSNERLVTITGTQECN 470
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 471 QMALYMLYSRLE 482
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N+ + + PS T++ + +P+ LIG++IGK G +I EI++ S A +++ S
Sbjct: 196 NQEDLETPSTSTSKA---YPMRLLIPHILIGSIIGKAGVRIREIQEASNA--KLNASDTL 250
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
+S +R++ + G DA+ +A Y + + VE L G
Sbjct: 251 LPNSGERSLVVLGVADAVHIAVYYVAQTLVEQLTERFGG 289
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N+ + + PS T++ + +P+ LIG++IGK G +I EI++ S A +++ S
Sbjct: 196 NQEDLETPSTSTSKA---YPMRLLIPHILIGSIIGKAGVRIREIQEASNA--KLNASDTL 250
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
+S +R++ + G DA+ +A Y + + VE L G
Sbjct: 251 LPNSGERSLVVLGVADAVHIAVYYVAQTLVEQLTERFGG 289
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ + +R + S+ +IIGKGG + IR SGA V SD + ER + + G D
Sbjct: 124 ETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTV-SDYSRGAVERILTVSGQVD 182
Query: 136 AVTQAI 141
AV++A
Sbjct: 183 AVSKAF 188
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
Q + ++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER V I G
Sbjct: 412 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSMIKI-NEPTDNSNERLVTITG----- 465
Query: 138 TQAIYQICLIMVDS 151
TQ Q+ L M+ S
Sbjct: 466 TQECNQMALYMLYS 479
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
Q + ++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER V I G
Sbjct: 412 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSMIKI-NEPTDNSNERLVTITG----- 465
Query: 583 TQAIYQICLIMVDS 596
TQ Q+ L M+ S
Sbjct: 466 TQECNQMALYMLYS 479
>gi|347842448|emb|CCD57020.1| similar to KH domain RNA binding protein [Botryotinia fuckeliana]
Length = 488
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V +R+ SG+K +SD ERI+TV G +D++ +AF
Sbjct: 127 HVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVSGVVDAVAKAF 186
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ + S+ LRL++P GSIIGKGG +IK I+E SGA +
Sbjct: 187 GLIIRTL----NNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARL 242
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ LP STER + + GV DAV A Y +
Sbjct: 243 NASDSYLPLSTERSLVVLGVADAVHIATYYV 273
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ SG+K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 136 EAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVSGVVDAVAKAFGLIIRTL-- 193
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + S+ LRL++P GSIIGKGG +IK I+E SGA + + LP
Sbjct: 194 --NNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARLNASDSYLPL 251
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
STER + + GV DAV A Y +
Sbjct: 252 STERSLVVLGVADAVHIATYYV 273
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 412 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTAECN 468
Query: 322 ALAQYLINMSVELLR 336
+A Y++ +E R
Sbjct: 469 QMALYMLYSRLESER 483
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 412 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTAECN 468
Query: 767 ALAQYLINMSVELLR 781
+A Y++ +E R
Sbjct: 469 QMALYMLYSRLESER 483
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 213 LLIPHILIGSIIGKGGVRIKEIQEASGA--RLNASDSYLPLSTERSLVVLGVADAVHIAT 270
Query: 326 YLI 328
Y +
Sbjct: 271 YYV 273
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 213 LLIPHILIGSIIGKGGVRIKEIQEASGA--RLNASDSYLPLSTERSLVVLGVADAVHIAT 270
Query: 771 YLI 773
Y +
Sbjct: 271 YYV 273
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ +++ ++IGKGG + +R+ SGA V SD + ER + + GV
Sbjct: 120 HDESGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTV-SDYQKGAVERILTVSGV 178
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 179 VDAVAKAFGLIIRTLNNEP 197
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ ES I +R ++ +++ ++IGKGG + +R+ SGA V SD + ER + + GV
Sbjct: 120 HDESGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTV-SDYQKGAVERILTVSGV 178
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 179 VDAVAKAFGLIIRTLNNEP 197
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
Q + ++ +P G+IIGKGG++I IR+ SG SV ++ NS ER V I G +
Sbjct: 410 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSG-SVIKINEPQDNSNERLVTITGTAECN 468
Query: 138 TQAIYQI 144
A+Y +
Sbjct: 469 QMALYML 475
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
Q + ++ +P G+IIGKGG++I IR+ SG SV ++ NS ER V I G +
Sbjct: 410 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSG-SVIKINEPQDNSNERLVTITGTAECN 468
Query: 583 TQAIYQI 589
A+Y +
Sbjct: 469 QMALYML 475
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 154/348 (44%), Gaps = 62/348 (17%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
+R ++ G IIGK G T+ + +SG++I +S S T +RI+ V G D +
Sbjct: 41 HLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVM 100
Query: 496 RAFSLITKNI----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+A LI + + EEF++ + + ++RL+VP S CG IIGKGG+ IK+
Sbjct: 101 KAMELILEKLLAEGEEFNEAEARP----------KVRLVVPNSSCGGIIGKGGATIKSFI 150
Query: 552 ETSGASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
E S A + ++ + +R V + G D AI I + L
Sbjct: 151 EESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLIL---------------KKLS 195
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
++ P + + F P AGL G G M
Sbjct: 196 EDVHYPPNLSSPF---------------PYAGLTFPNYPGVPVGYM---------IPQVP 231
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
N+ P N + Q+N+ + S +N+ Q +T + + +E IGAV+G+ G I
Sbjct: 232 YNNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLT--IGIADEHIGAVVGRAGRNI 289
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
EI + SGA I+IS + ++DR +T+TGT +AI A+ +I V
Sbjct: 290 TEIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 150/337 (44%), Gaps = 62/337 (18%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI- 60
G IIGK G T+ + +SG++I +S S T +RI+ V G D + +A LI + +
Sbjct: 52 GCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVMKAMELILEKLL 111
Query: 61 ---EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA- 116
EEF++ + + ++RL+VP S CG IIGKGG+ IK+ E S A + ++
Sbjct: 112 AEGEEFNEAEARP----------KVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISP 161
Query: 117 -SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
+ +R V + G D AI I + L ++ P + +
Sbjct: 162 QDNNYVGLHDRLVTVTGTFDNQMNAIDLIL---------------KKLSEDVHYPPNLSS 206
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
F P AGL G G M N+ P N
Sbjct: 207 PF---------------PYAGLTFPNYPGVPVGYM---------IPQVPYNNAVNYGPNN 242
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+ Q+N+ + S +N+ Q +T + + +E IGAV+G+ G I EI + SGA I
Sbjct: 243 GYGGRYQNNKPSTPMRSPASNEAQESLT--IGIADEHIGAVVGRAGRNITEIIQASGARI 300
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+IS + ++DR +T+TGT +AI A+ +I V
Sbjct: 301 KISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 58/267 (21%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
++ N+ + + + VPN G +IGKGG I + S A I+IS +DR +
Sbjct: 115 EEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLV 174
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 371
T+TGT D A ++L+ L+ +D NL S P AGL N
Sbjct: 175 TVTGTFDNQMNA-------IDLILKKLS---------EDVHYPPNLSSPFPYAGLTFPNY 218
Query: 372 ---PLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG----- 423
P+ +PQ+ A+N G + G+GG
Sbjct: 219 PGVPVGYMIPQVPY----NNAVNY-----------------------GPNNGYGGRYQNN 251
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----S 478
P P + + Q + + + +G+++G++G + ++ + SG++I ISD S
Sbjct: 252 KPSTP-MRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIS 310
Query: 479 STPERIVTVIGSMDSLFRAFSLITKNI 505
T +R VT+ G+ +++ A S+I + +
Sbjct: 311 GTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S++ + ++ V N G +IGKGG+ I + + SGA I++S+S E +NDR
Sbjct: 30 SEEGDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 89
Query: 312 ITMTGTPDAIALAQYLI 328
I ++G D + A LI
Sbjct: 90 IMVSGLFDEVMKAMELI 106
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S++ + ++ V N G +IGKGG+ I + + SGA I++S+S E +NDR
Sbjct: 30 SEEGDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 89
Query: 757 ITMTGTPDAIALAQYLI 773
I ++G D + A LI
Sbjct: 90 IMVSGLFDEVMKAMELI 106
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
++ N+ + + + VPN G +IGKGG I + S A I+IS +DR +
Sbjct: 115 EEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLV 174
Query: 758 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 816
T+TGT D A ++L+ L+ +D NL S P AGL N
Sbjct: 175 TVTGTFDNQMNA-------IDLILKKLS---------EDVHYPPNLSSPFPYAGLTFPNY 218
Query: 817 ---PLAAALPQL 825
P+ +PQ+
Sbjct: 219 PGVPVGYMIPQV 230
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 73 GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNI 130
G+ + + LR +V + G IIGKGGS I + SGA + + + + P + +R + +
Sbjct: 33 GDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMV 92
Query: 131 KGVPDAVTQAI 141
G+ D V +A+
Sbjct: 93 SGLFDEVMKAM 103
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 518 GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNI 575
G+ + + LR +V + G IIGKGGS I + SGA + + + + P + +R + +
Sbjct: 33 GDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMV 92
Query: 576 KGVPDAVTQAI 586
G+ D V +A+
Sbjct: 93 SGLFDEVMKAM 103
>gi|145238284|ref|XP_001391789.1| RNA-binding protein rnc1 [Aspergillus niger CBS 513.88]
gi|134076273|emb|CAL00757.1| unnamed protein product [Aspergillus niger]
gi|350635790|gb|EHA24151.1| hypothetical protein ASPNIDRAFT_209528 [Aspergillus niger ATCC
1015]
Length = 360
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 100/173 (57%), Gaps = 12/173 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGKSG+ V LR+E+G K +S +R++TV G ++ RA++
Sbjct: 45 LRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLNGTARAYA 104
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
L+ K + E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 105 LVAKGLLEGAPQMG--MGGIVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASG 159
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 607
+ +MLP STER V ++G P+ + +A+++I ++D +G TI Y P
Sbjct: 160 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNP 212
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 12/166 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGKSG+ V LR+E+G K +S +R++TV G ++ RA++L+ K +
Sbjct: 52 KEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLNGTARAYALVAKGLL 111
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 112 EGAPQMG--MGGIVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQK 166
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
+MLP STER V ++G P+ + +A+++I ++D +G TI Y P
Sbjct: 167 EMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNP 212
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T+ +++P +++G +IG+GG+KI EIR+ SGA I I+K+ +E + +R T+ G+ A
Sbjct: 281 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDE--TGERMFTIMGSAQANE 338
Query: 323 LAQYLINMSVE 333
A YL+ ++E
Sbjct: 339 KALYLLYENLE 349
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T+ +++P +++G +IG+GG+KI EIR+ SGA I I+K+ +E + +R T+ G+ A
Sbjct: 281 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDE--TGERMFTIMGSAQANE 338
Query: 768 LAQYLINMSVE 778
A YL+ ++E
Sbjct: 339 KALYLLYENLE 349
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 47 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 106
D+ R + L+T++ EE + QN + +PA G IIG+GGS+I IR
Sbjct: 263 DTSNRGYPLVTEDGEEI-QTQN---------------ISIPADMVGCIIGRGGSKITEIR 306
Query: 107 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+SGA + +A + ER I G A +A+Y
Sbjct: 307 RSSGARISIAKAPHDETGERMFTIMGSAQANEKALY 342
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
D+ R + L+T++ EE + QN + +PA G IIG+GGS+I IR
Sbjct: 263 DTSNRGYPLVTEDGEEI-QTQN---------------ISIPADMVGCIIGRGGSKITEIR 306
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+SGA + +A + ER I G A +A+Y
Sbjct: 307 RSSGARISIAKAPHDETGERMFTIMGSAQANEKALY 342
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 106/252 (42%), Gaps = 60/252 (23%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G +IG+ G KI I+ SG +R+ E S +R + + GTP+ I A + I
Sbjct: 140 MGTIIGRQGLKIKHIQDASG--VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEI---- 193
Query: 333 ELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNA 392
G+ +DD+ IL P +
Sbjct: 194 ------------GKCLIDDWQRGT------------------------GTILYNPAVRAS 217
Query: 393 LTSLSALGGLSDLLGGG-------SSGGG---SGNSGGFGGV--PQGPN--YANIQTTGV 438
+ + ++ ++ +G G +G G S SGG+G P N Y + G
Sbjct: 218 VGTTTSTSTMNQSVGNGYNSRPYNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGE 277
Query: 439 QRRMRHI-MQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSL 494
+ + ++I + VG IIG+ G + ++R SG++I I+ + T ER+ T++GS +
Sbjct: 278 EIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQAN 337
Query: 495 FRAFSLITKNIE 506
+A L+ +N+E
Sbjct: 338 EKALYLLYENLE 349
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNIE 61
VG IIG+ G + ++R SG++I I+ + T ER+ T++GS + +A L+ +N+E
Sbjct: 291 VGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLE 349
>gi|452004384|gb|EMD96840.1| hypothetical protein COCHEDRAFT_1220374 [Cochliobolus
heterostrophus C5]
Length = 489
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF
Sbjct: 130 HIRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAF 189
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + + ++ S+ +RL++P GSIIGK G +I+ I+E S A +
Sbjct: 190 GLIVRTLNQ----EDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKL 245
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ +LPNS ER + + GV DAV A+Y + +V+
Sbjct: 246 NASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVE 282
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF LI + + +
Sbjct: 139 EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFGLIVRTLNQ 198
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ S+ +RL++P GSIIGK G +I+ I+E S A + + +LPN
Sbjct: 199 ----EDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLPN 254
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
S ER + + GV DAV A+Y + +V+
Sbjct: 255 SGERSLIVLGVADAVHIAVYYVAQTLVE 282
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ + +R + S+ +IIGKGG + IR SGA V SD + ER + + G D
Sbjct: 125 ETNWLHIRACIGTSEAATIIGKGGENVTQIRRLSGAKCTV-SDYSRGAVERILTVSGQVD 183
Query: 136 AVTQAI 141
AV++A
Sbjct: 184 AVSKAF 189
>gi|358368755|dbj|GAA85371.1| KH domain RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 360
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 100/173 (57%), Gaps = 12/173 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGKSG+ V LR+E+G K +S +R++TV G ++ RA++
Sbjct: 45 LRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLNGTARAYA 104
Query: 500 LITKNIEEFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
L+ K + E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG
Sbjct: 105 LVAKGLLEGAPQMG--MGGIVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASG 159
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 607
+ +MLP STER V ++G P+ + +A+++I ++D +G TI Y P
Sbjct: 160 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNP 212
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 12/166 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGKSG+ V LR+E+G K +S +R++TV G ++ RA++L+ K +
Sbjct: 52 KEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLNGTARAYALVAKGLL 111
Query: 62 EFHKNQNKHLGG----NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E +GG NG + RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 112 EGAPQMG--MGGIVSNNGTHPV---RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQK 166
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
+MLP STER V ++G P+ + +A+++I ++D +G TI Y P
Sbjct: 167 EMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNP 212
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T+ +++P +++G +IG+GG+KI EIR+ SGA I I+K+ +E + +R T+ G+ A
Sbjct: 281 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDE--TGERMFTIMGSAQANE 338
Query: 323 LAQYLINMSVE 333
A YL+ ++E
Sbjct: 339 KALYLLYENLE 349
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T+ +++P +++G +IG+GG+KI EIR+ SGA I I+K+ +E + +R T+ G+ A
Sbjct: 281 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDE--TGERMFTIMGSAQANE 338
Query: 768 LAQYLINMSVE 778
A YL+ ++E
Sbjct: 339 KALYLLYENLE 349
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 60/252 (23%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G +IG+ G KI I+ SG +R+ E S +R + + GTP+ I A + I
Sbjct: 140 MGTIIGRQGLKIKHIQDASG--VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEI---- 193
Query: 333 ELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNA 392
G+ +DD+ IL P +
Sbjct: 194 ------------GKCLIDDWQRGT------------------------GTILYNPAVRAS 217
Query: 393 LTSLSALGGLSDLLGGG-------SSGGG---SGNSGGFGGV--PQGPN--YANIQTTGV 438
+ + + ++ +G G +G G S SGG+G P N Y + G
Sbjct: 218 VGTTPSTSTMNQSVGNGYNSRPYNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGE 277
Query: 439 QRRMRHI-MQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSL 494
+ + ++I + VG IIG+ G + ++R SG++I I+ + T ER+ T++GS +
Sbjct: 278 EIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQAN 337
Query: 495 FRAFSLITKNIE 506
+A L+ +N+E
Sbjct: 338 EKALYLLYENLE 349
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 47 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 106
D+ R + L+T++ EE + QN + +PA G IIG+GGS+I IR
Sbjct: 263 DTSNRGYPLVTEDGEEI-QTQN---------------ISIPADMVGCIIGRGGSKITEIR 306
Query: 107 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+SGA + +A + ER I G A +A+Y
Sbjct: 307 RSSGARISIAKAPHDETGERMFTIMGSAQANEKALY 342
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
D+ R + L+T++ EE + QN + +PA G IIG+GGS+I IR
Sbjct: 263 DTSNRGYPLVTEDGEEI-QTQN---------------ISIPADMVGCIIGRGGSKITEIR 306
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+SGA + +A + ER I G A +A+Y
Sbjct: 307 RSSGARISIAKAPHDETGERMFTIMGSAQANEKALY 342
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNIE 61
VG IIG+ G + ++R SG++I I+ + T ER+ T++GS + +A L+ +N+E
Sbjct: 291 VGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLE 349
>gi|451855342|gb|EMD68634.1| hypothetical protein COCSADRAFT_350318 [Cochliobolus sativus
ND90Pr]
Length = 488
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF
Sbjct: 130 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAF 189
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + + ++ S+ +RL++P GSIIGK G +I+ I+E S A +
Sbjct: 190 GLIVRTLNQ----EDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKL 245
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ +LPNS ER + + GV DAV A+Y + +V+
Sbjct: 246 NASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVE 282
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF LI + + +
Sbjct: 139 EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFGLIVRTLNQ 198
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ S+ +RL++P GSIIGK G +I+ I+E S A + + +LPN
Sbjct: 199 ----EDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLPN 254
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
S ER + + GV DAV A+Y + +V+
Sbjct: 255 SGERSLIVLGVADAVHIAVYYVAQTLVE 282
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E ++SN+R +T+TGT +
Sbjct: 414 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNSNERLVTITGTQECN 470
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 471 QMALYMLYSRLE 482
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E ++SN+R +T+TGT +
Sbjct: 414 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNSNERLVTITGTQECN 470
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 471 QMALYMLYSRLE 482
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N+ + + PS T++ + +P+ LIG++IGK G +I EI++ S A +++ S
Sbjct: 197 NQEDLETPSTSTSKA---YPMRLLIPHILIGSIIGKAGVRIREIQEASNA--KLNASDTL 251
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNGEGGGE 346
+S +R++ + G DA+ +A Y + + VE L G +
Sbjct: 252 LPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQ 295
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N+ + + PS T++ + +P+ LIG++IGK G +I EI++ S A +++ S
Sbjct: 197 NQEDLETPSTSTSKA---YPMRLLIPHILIGSIIGKAGVRIREIQEASNA--KLNASDTL 251
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNGEGGGE 791
+S +R++ + G DA+ +A Y + + VE L G +
Sbjct: 252 LPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQ 295
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ + +R + S+ +IIGKGG + IR SGA V SD + ER + + G D
Sbjct: 125 ETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTV-SDYSRGAVERILTVSGQVD 183
Query: 136 AVTQAI 141
AV++A
Sbjct: 184 AVSKAF 189
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
Q + ++ +P G+IIGKGG++I IR+ SG SV ++ NS ER V I G
Sbjct: 412 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSG-SVIKINEPTDNSNERLVTITG----- 465
Query: 138 TQAIYQICLIMVDS 151
TQ Q+ L M+ S
Sbjct: 466 TQECNQMALYMLYS 479
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
Q + ++ +P G+IIGKGG++I IR+ SG SV ++ NS ER V I G
Sbjct: 412 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSG-SVIKINEPTDNSNERLVTITG----- 465
Query: 583 TQAIYQICLIMVDS 596
TQ Q+ L M+ S
Sbjct: 466 TQECNQMALYMLYS 479
>gi|156030905|ref|XP_001584778.1| hypothetical protein SS1G_14233 [Sclerotinia sclerotiorum 1980]
gi|154700624|gb|EDO00363.1| hypothetical protein SS1G_14233 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 487
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V +R+ SG+K +SD ERI+TV G +D++ +AF
Sbjct: 128 HVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVSGVVDAVAKAF 187
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ + S+ LRL++P GSIIGKGG +I+ I+E SGA +
Sbjct: 188 GLIIRTL----NNEPLEAPSDSNSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARL 243
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ LP STER + + GV DAV A Y +
Sbjct: 244 NASDSYLPLSTERSLVVLGVADAVHIATYYV 274
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ SG+K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 137 EAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVSGVVDAVAKAFGLIIRTL-- 194
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + S+ LRL++P GSIIGKGG +I+ I+E SGA + + LP
Sbjct: 195 --NNEPLEAPSDSNSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARLNASDSYLPL 252
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
STER + + GV DAV A Y +
Sbjct: 253 STERSLVVLGVADAVHIATYYV 274
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 411 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTAECN 467
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 468 QMALYMLYSRLE 479
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 411 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTAECN 467
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 468 QMALYMLYSRLE 479
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 214 LLIPHILIGSIIGKGGVRIREIQEASGA--RLNASDSYLPLSTERSLVVLGVADAVHIAT 271
Query: 326 YLI 328
Y +
Sbjct: 272 YYV 274
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 214 LLIPHILIGSIIGKGGVRIREIQEASGA--RLNASDSYLPLSTERSLVVLGVADAVHIAT 271
Query: 771 YLI 773
Y +
Sbjct: 272 YYV 274
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ +++ ++IGKGG + +R+ SGA V SD + ER + + GV
Sbjct: 121 HDESGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTV-SDYQKGAVERILTVSGV 179
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 180 VDAVAKAFGLIIRTLNNEP 198
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ ES I +R ++ +++ ++IGKGG + +R+ SGA V SD + ER + + GV
Sbjct: 121 HDESGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTV-SDYQKGAVERILTVSGV 179
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 180 VDAVAKAFGLIIRTLNNEP 198
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
Q + + G Q + ++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER
Sbjct: 398 QGQPMAGAIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPQDNSNER 456
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G + A+Y +
Sbjct: 457 LVTITGTAECNQMALYML 474
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 571
Q + + G Q + ++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER
Sbjct: 398 QGQPMAGAIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPQDNSNER 456
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G + A+Y +
Sbjct: 457 LVTITGTAECNQMALYML 474
>gi|299029|gb|AAB26047.1| pre-mRNA binding K protein, hnRNP K [Xenopus laevis, Peptide, 396
aa]
Length = 396
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 9/178 (5%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIG 489
+ + T + +R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++
Sbjct: 30 FKRSRNTDMMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISA 89
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
++++ I +EE H GN +LRL++ S G IIG G++IK
Sbjct: 90 DIETIGEILKKIIPTLEE-------HFKGNDFD--CELRLLIHQSLAGGIIGVKGAKIKE 140
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG + PY P
Sbjct: 141 LREKTQTTIKLFQECCPHSTDRVVLIGGRPDRVVECIKVILDLISESPVKGRSQPYDP 198
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 9/162 (5%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 46 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE H GN +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 106 EE-------HFKGNDFD--CELRLLIHQSLAGGIIGVKGAKIKELREKTQTTIKLFQECC 156
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG + PY P
Sbjct: 157 PHSTDRVVLIGGRPDRVVECIKVILDLISESPVKGRSQPYDP 198
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S+DR IT+TGT D I
Sbjct: 318 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSDDRIITITGTQDQI 374
Query: 322 ALAQYLINMSVE 333
A++L+ SV+
Sbjct: 375 QNARFLLQNSVK 386
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S+DR IT+TGT D I
Sbjct: 318 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSDDRIITITGTQDQI 374
Query: 767 ALAQYLINMSVE 778
A++L+ SV+
Sbjct: 375 QNARFLLQNSVK 386
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 317 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQ 375
Query: 139 QAIY 142
A +
Sbjct: 376 NARF 379
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 317 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQ 375
Query: 584 QAIY 587
A +
Sbjct: 376 NARF 379
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ ++++F
Sbjct: 330 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQIQNARFLLQNSVKQFS 389
Query: 65 KN 66
++
Sbjct: 390 ED 391
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ ++++F
Sbjct: 330 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQDQIQNARFLLQNSVKQFS 389
Query: 510 KN 511
++
Sbjct: 390 ED 391
>gi|330914909|ref|XP_003296833.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
gi|311330863|gb|EFQ95085.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF
Sbjct: 131 HVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAF 190
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + + ++ S+ +RL++P GSIIGK G +I+ I+E S A +
Sbjct: 191 GLIVRTLNQ----EDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQEASNAKL 246
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ +LPNS ER + + GV DAV A+Y + +V+
Sbjct: 247 NASDTLLPNSGERSLIVLGVADAVHIAVYYVAQTLVE 283
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V ++R SG+K +SD S ERI+TV G +D++ +AF LI + + +
Sbjct: 140 EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVDAVSKAFGLIVRTLNQ 199
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ S+ +RL++P GSIIGK G +I+ I+E S A + + +LPN
Sbjct: 200 ----EDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQEASNAKLNASDTLLPN 255
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
S ER + + GV DAV A+Y + +V+
Sbjct: 256 SGERSLIVLGVADAVHIAVYYVAQTLVE 283
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E ++SN+R +T+TGT +
Sbjct: 416 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNSNERLVTITGTQECN 472
Query: 322 ALAQYLI 328
+A Y++
Sbjct: 473 QMALYML 479
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 53/67 (79%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E ++SN+R +T+TGT +
Sbjct: 416 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPTDNSNERLVTITGTQECN 472
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 473 QMALYML 479
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
N+ + + PS T++ + +P+ LIG++IGK G +I EI++ S A +++ S
Sbjct: 198 NQEDLETPSTSTSKA---YPMRLLIPHILIGSIIGKAGIRIREIQEASNA--KLNASDTL 252
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 341
+S +R++ + G DA+ +A Y + + VE L G
Sbjct: 253 LPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGG 291
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N+ + + PS T++ + +P+ LIG++IGK G +I EI++ S A +++ S
Sbjct: 198 NQEDLETPSTSTSKA---YPMRLLIPHILIGSIIGKAGIRIREIQEASNA--KLNASDTL 252
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
+S +R++ + G DA+ +A Y + + VE L G
Sbjct: 253 LPNSGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGG 291
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ + +R + S+ +IIGKGG + IR SGA V SD + ER + + G D
Sbjct: 126 ETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTV-SDYSRGAVERILTVSGQVD 184
Query: 136 AVTQAI 141
AV++A
Sbjct: 185 AVSKAF 190
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
Q + ++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER V I G
Sbjct: 414 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPTDNSNERLVTITG----- 467
Query: 138 TQAIYQICLIMVDS 151
TQ Q+ L M+ S
Sbjct: 468 TQECNQMALYMLYS 481
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
Q + ++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER V I G
Sbjct: 414 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPTDNSNERLVTITG----- 467
Query: 583 TQAIYQICLIMVDS 596
TQ Q+ L M+ S
Sbjct: 468 TQECNQMALYMLYS 481
>gi|358400710|gb|EHK50036.1| hypothetical protein TRIATDRAFT_51252 [Trichoderma atroviride IMI
206040]
Length = 477
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V +R+ S +K +SD ERI+TV G +D++ +AF
Sbjct: 119 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIVDAVAKAF 178
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ S+ LRL++P GSIIGKGGS+I+ I+E SGA +
Sbjct: 179 GLIIRTL----NNEPLSEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARL 234
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ LP S+ER + + GV DAV A Y +
Sbjct: 235 NASDSCLPMSSERSLVVMGVADAVHIATYYV 265
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V +R+ S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 128 EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 185
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ S+ LRL++P GSIIGKGGS+I+ I+E SGA + + LP
Sbjct: 186 --NNEPLSEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDSCLPM 243
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
S+ER + + GV DAV A Y +
Sbjct: 244 SSERSLVVMGVADAVHIATYYV 265
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI---NEPQDNSNERLVTITGTEECN 456
Query: 322 ALAQYLI 328
+A Y++
Sbjct: 457 RMALYML 463
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI---NEPQDNSNERLVTITGTEECN 456
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 457 RMALYML 463
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG++I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 205 LLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 262
Query: 326 YLINMS-VELLRANLNGEGG 344
Y + + +E L G G
Sbjct: 263 YYVGSTLLEQLNERFGGPGA 282
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG++I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 205 LLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 262
Query: 771 YLINMS-VELLRANLNGEGG 789
Y + + +E L G G
Sbjct: 263 YYVGSTLLEQLNERFGGPGA 282
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 112 HDESSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTV-SDYQKGAVERILTVSGI 170
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 171 VDAVAKAFGLIIRTLNNEP 189
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ ES I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 112 HDESSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTV-SDYQKGAVERILTVSGI 170
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 171 VDAVAKAFGLIIRTLNNEP 189
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I ++ +P G+IIGKGG +I IR+ SG SV ++ NS ER V I G +
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSG-SVIKINEPQDNSNERLVTITGTEECNRM 458
Query: 140 AIYQI 144
A+Y +
Sbjct: 459 ALYML 463
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I ++ +P G+IIGKGG +I IR+ SG SV ++ NS ER V I G +
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSG-SVIKINEPQDNSNERLVTITGTEECNRM 458
Query: 585 AIYQI 589
A+Y +
Sbjct: 459 ALYML 463
>gi|150864547|ref|XP_001383407.2| PAB1 binding protein [Scheffersomyces stipitis CBS 6054]
gi|149385803|gb|ABN65378.2| PAB1 binding protein [Scheffersomyces stipitis CBS 6054]
Length = 500
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE I+GK GE + +RE++ +I +S++ + PERI++V G +++ RAF LIT+ I
Sbjct: 114 KEASCIVGKKGEKINHIREKASVRINVSENLKNVPERIISVRGPAENVARAFGLITRTIL 173
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ +++ + SQ L+++VP G IIGK GS+ + I E S A + A LP
Sbjct: 174 DEPEDEPASMI----SQQYNLKILVPHPMIGFIIGKQGSKFREIEENSAAKLKAAEQPLP 229
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRP 162
ST+R ++I GV DA+ AIY I +M+ D K I Y P
Sbjct: 230 YSTDRILSITGVGDAIHIAIYYISQVMLEHKDCLKKNKIIYYNP 273
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 506
KE I+GK GE + +RE++ +I +S++ + PERI++V G +++ RAF LIT+ I
Sbjct: 114 KEASCIVGKKGEKINHIREKASVRINVSENLKNVPERIISVRGPAENVARAFGLITRTIL 173
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+ +++ + SQ L+++VP G IIGK GS+ + I E S A + A LP
Sbjct: 174 DEPEDEPASMI----SQQYNLKILVPHPMIGFIIGKQGSKFREIEENSAAKLKAAEQPLP 229
Query: 567 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRP 607
ST+R ++I GV DA+ AIY I +M+ D K I Y P
Sbjct: 230 YSTDRILSITGVGDAIHIAIYYISQVMLEHKDCLKKNKIIYYNP 273
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
D P+ +QQ N ++ VP+ +IG +IGK G+K EI + S A ++ + + S
Sbjct: 178 DEPASMISQQYNL---KILVPHPMIGFIIGKQGSKFREIEENSAA--KLKAAEQPLPYST 232
Query: 309 DRTITMTGTPDAIALAQYLI 328
DR +++TG DAI +A Y I
Sbjct: 233 DRILSITGVGDAIHIAIYYI 252
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 694 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
D P+ +QQ N ++ VP+ +IG +IGK G+K EI + S A ++ + + S
Sbjct: 178 DEPASMISQQYNL---KILVPHPMIGFIIGKQGSKFREIEENSAA--KLKAAEQPLPYST 232
Query: 754 DRTITMTGTPDAIALAQYLI 773
DR +++TG DAI +A Y I
Sbjct: 233 DRILSITGVGDAIHIAIYYI 252
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 70 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
H + + + +R+ P + I+GK G +I IRE + + V S+ L N ER ++
Sbjct: 95 HRERDSDPTYVSIRMYCPVKEASCIVGKKGEKINHIREKASVRINV-SENLKNVPERIIS 153
Query: 130 IKGVPDAVTQAIYQICLIMVDSP 152
++G + V +A I ++D P
Sbjct: 154 VRGPAENVARAFGLITRTILDEP 176
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 515 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
H + + + +R+ P + I+GK G +I IRE + + V S+ L N ER ++
Sbjct: 95 HRERDSDPTYVSIRMYCPVKEASCIVGKKGEKINHIREKASVRINV-SENLKNVPERIIS 153
Query: 575 IKGVPDAVTQAIYQICLIMVDSP 597
++G + V +A I ++D P
Sbjct: 154 VRGPAENVARAFGLITRTILDEP 176
>gi|358379880|gb|EHK17559.1| hypothetical protein TRIVIDRAFT_231881 [Trichoderma virens Gv29-8]
Length = 477
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V +R+ S +K +SD ERI+TV G +D++ +AF
Sbjct: 117 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIVDAVAKAF 176
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ + S+ LRL++P GSIIGKGGS+I+ I+E SGA +
Sbjct: 177 GLIIRTL----NNEPLNEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARL 232
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ LP S+ER + + GV DAV A Y +
Sbjct: 233 NASDSCLPMSSERSLVVMGVADAVHIATYYV 263
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V +R+ S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 126 EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 183
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + S+ LRL++P GSIIGKGGS+I+ I+E SGA + + LP
Sbjct: 184 --NNEPLNEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDSCLPM 241
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
S+ER + + GV DAV A Y +
Sbjct: 242 SSERSLVVMGVADAVHIATYYV 263
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI---NEPQDNSNERLVTITGTEECN 456
Query: 322 ALAQYLI 328
+A Y++
Sbjct: 457 RMALYML 463
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI---NEPQDNSNERLVTITGTEECN 456
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 457 RMALYML 463
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG++I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 203 LLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 260
Query: 326 YLINMSVELLRANLNGEGGG 345
Y + + L LN GG
Sbjct: 261 YYVGST---LLEQLNERFGG 277
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG++I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 203 LLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 260
Query: 771 YLINMSVELLRANLNGEGGG 790
Y + + L LN GG
Sbjct: 261 YYVGST---LLEQLNERFGG 277
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 110 HDESSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTV-SDYQKGAVERILTVSGI 168
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 169 VDAVAKAFGLIIRTLNNEP 187
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ ES I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 110 HDESSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTV-SDYQKGAVERILTVSGI 168
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 169 VDAVAKAFGLIIRTLNNEP 187
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
Q H G G + Q ++ +P G+IIGKGG +I IR+ SG SV ++ NS ER
Sbjct: 388 QPMHAGMPGTGPITQ-QIYIPNDMVGAIIGKGGQKINEIRQMSG-SVIKINEPQDNSNER 445
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G + A+Y +
Sbjct: 446 LVTITGTEECNRMALYML 463
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 571
Q H G G + Q ++ +P G+IIGKGG +I IR+ SG SV ++ NS ER
Sbjct: 388 QPMHAGMPGTGPITQ-QIYIPNDMVGAIIGKGGQKINEIRQMSG-SVIKINEPQDNSNER 445
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G + A+Y +
Sbjct: 446 LVTITGTEECNRMALYML 463
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 151/352 (42%), Gaps = 70/352 (19%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
+R ++ G IIGK G T+ + +SG++I +S S T +RI+ V G D +
Sbjct: 47 HLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVI 106
Query: 496 RAFSLITKNI----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+A L+ + + EEF++ + + + RL+VP S CG IIGKGG+ IK
Sbjct: 107 KAMELVLEKLLAEGEEFNEAEARP----------KFRLVVPNSSCGGIIGKGGATIKAFI 156
Query: 552 ETSGASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIM---VDSPPK-GATIPY 605
E S A + ++ + +R V I G + +AIY I + V PP + PY
Sbjct: 157 EDSHAGIKISPQDNNFVGLHDRLVTITGPFNNQMRAIYLILSKLSEDVHYPPNLSSPFPY 216
Query: 606 RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALA 665
G G + M NN A+ G N GG
Sbjct: 217 -------AGLGFPSYPAPVPVGYMIPQVPYNN------AVNYGPNGYGG----------- 252
Query: 666 ALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKG 725
R QN R S TN Q T + V +E IGAV+G+
Sbjct: 253 -------------RYQNNKPGTPVR------SPATNDAQESHT--IGVADEHIGAVVGRA 291
Query: 726 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
G I EI + SGA I+IS + ++DR +T+TGTP+AI A+ +I V
Sbjct: 292 GRNITEIIQASGARIKISDRGDFIAGTSDRKVTITGTPEAIQAAESMIMQRV 343
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 147/341 (43%), Gaps = 70/341 (20%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI- 60
G IIGK G T+ + +SG++I +S S T +RI+ V G D + +A L+ + +
Sbjct: 58 GCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMELVLEKLL 117
Query: 61 ---EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA- 116
EEF++ + + + RL+VP S CG IIGKGG+ IK E S A + ++
Sbjct: 118 AEGEEFNEAEARP----------KFRLVVPNSSCGGIIGKGGATIKAFIEDSHAGIKISP 167
Query: 117 -SDMLPNSTEREVNIKGVPDAVTQAIYQICLIM---VDSPPK-GATIPYRPLPQNAGGPG 171
+ +R V I G + +AIY I + V PP + PY G G
Sbjct: 168 QDNNFVGLHDRLVTITGPFNNQMRAIYLILSKLSEDVHYPPNLSSPFPY-------AGLG 220
Query: 172 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 231
+ M NN A+ G N GG
Sbjct: 221 FPSYPAPVPVGYMIPQVPYNN------AVNYGPNGYGG---------------------- 252
Query: 232 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
R QN R S TN Q T + V +E IGAV+G+ G I EI + S
Sbjct: 253 --RYQNNKPGTPVR------SPATNDAQESHT--IGVADEHIGAVVGRAGRNITEIIQAS 302
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
GA I+IS + ++DR +T+TGTP+AI A+ +I V
Sbjct: 303 GARIKISDRGDFIAGTSDRKVTITGTPEAIQAAESMIMQRV 343
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 50/263 (19%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
++ N+ + + + VPN G +IGKGG I + S A I+IS +DR +
Sbjct: 121 EEFNEAEARPKFRLVVPNSSCGGIIGKGGATIKAFIEDSHAGIKISPQDNNFVGLHDRLV 180
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLN---- 368
T+TG + A YLI + +D NL S P AGL
Sbjct: 181 TITGPFNNQMRAIYLILSKLS----------------EDVHYPPNLSSPFPYAGLGFPSY 224
Query: 369 -ASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQG 427
A P+ +PQ+ ++ + G +G G G P
Sbjct: 225 PAPVPVGYMIPQVP--------------------YNNAVNYGPNGYGGRYQNNKPGTP-- 262
Query: 428 PNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPE 482
+ T Q + + +G+++G++G + ++ + SG++I ISD + T +
Sbjct: 263 --VRSPATNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSD 320
Query: 483 RIVTVIGSMDSLFRAFSLITKNI 505
R VT+ G+ +++ A S+I + +
Sbjct: 321 RKVTITGTPEAIQAAESMIMQRV 343
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
++ + ++ V N G +IGKGG+ I + + SGA I++S+S E +NDR
Sbjct: 36 AEPEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 95
Query: 312 ITMTGTPDAIALAQYLI 328
I ++G D + A L+
Sbjct: 96 IMVSGLFDEVIKAMELV 112
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 81 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVT 138
LR +V + G IIGKGGS I + SGA + + + + P + +R + + G+ D V
Sbjct: 47 HLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVI 106
Query: 139 QAI 141
+A+
Sbjct: 107 KAM 109
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K GSIIGK G + +LR + + + + D PERI+T+I S D+ + +
Sbjct: 25 LRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPDCPGPERILTIISSNDNALKVLGEV 84
Query: 502 TKNIEE----FHKNQNKHLGGNGESQL----IQLRLIVPASQCGSIIGKGGSQIKTIRET 553
N+E+ F + GN ++Q + +R++V SQ G IIGKGG ++K +RE
Sbjct: 85 MGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGKGGLKVKELREK 144
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+G+ + + + P ST+R V I G P+ + + ++ ++ +P KGA PY P
Sbjct: 145 TGSRIKIYTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKTAPVKGAEDPYDP 198
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 8/167 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE- 62
K GSIIGK G + +LR + + + + D PERI+T+I S D+ + + N+E+
Sbjct: 32 KVAGSIIGKGGFNISRLRTDYNATVTVPDCPGPERILTIISSNDNALKVLGEVMGNLEDG 91
Query: 63 ---FHKNQNKHLGGNGESQL----IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
F + GN ++Q + +R++V SQ G IIGKGG ++K +RE +G+ + +
Sbjct: 92 GSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGKGGLKVKELREKTGSRIKI 151
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
+ P ST+R V I G P+ + + ++ ++ +P KGA PY P
Sbjct: 152 YTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKTAPVKGAEDPYDP 198
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K GSIIGK G + +LR + + + + D PERI+T+I S D+ + +
Sbjct: 27 LRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPDCPGPERILTIISSNDNALKVLGEV 86
Query: 502 TKNIEE----FHKNQNKHLGGNGESQL----IQLRLIVPASQCGSIIGKGGSQIKTIRET 553
N+E+ F + GN ++Q + +R++V SQ G IIGKGG ++K +RE
Sbjct: 87 MGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGKGGLKVKELREK 146
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+G+ + + + P ST+R V I G P+ + + ++ ++ +P KGA PY P
Sbjct: 147 TGSRIKIYTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKTAPVKGAEDPYDP 200
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 8/167 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE- 62
K GSIIGK G + +LR + + + + D PERI+T+I S D+ + + N+E+
Sbjct: 34 KVAGSIIGKGGFNISRLRTDYNATVTVPDCPGPERILTIISSNDNALKVLGEVMGNLEDG 93
Query: 63 ---FHKNQNKHLGGNGESQL----IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
F + GN ++Q + +R++V SQ G IIGKGG ++K +RE +G+ + +
Sbjct: 94 GSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGKGGLKVKELREKTGSRIKI 153
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
+ P ST+R V I G P+ + + ++ ++ +P KGA PY P
Sbjct: 154 YTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKTAPVKGAEDPYDP 200
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 156/348 (44%), Gaps = 63/348 (18%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
+R ++ G IIGK G T+ + + +SG++I +S S T +RI+ V G D +
Sbjct: 42 HLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVI 101
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
+A LI + + + N+ E++ ++RL+VP S CG IIGKGGS IK+ E S
Sbjct: 102 KAMELILEKLLAEGEESNE-----AEARP-KVRLVVPNSSCGGIIGKGGSTIKSFIEDSH 155
Query: 556 ASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIM---VDSPPK-GATIPYRPLP 609
A + ++ + +R V + G D +AIY I + V PP + PY L
Sbjct: 156 AGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL- 214
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
G P G G P + N A+ G N GG
Sbjct: 215 ---GFPSYPGVPVGYM-----IPQVPYN-----NAVNYGPNGYGG--------------- 246
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
R QN + R S N Q+ +T + + +E IGAV+G+ G I
Sbjct: 247 ---------RYQNNKPSTPMR------SPANNDAQDSLT--IGIADEHIGAVVGRAGRNI 289
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
EI + SGA I+IS + +++R +T+TGT +AI A+ +I V
Sbjct: 290 TEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 337
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 152/337 (45%), Gaps = 63/337 (18%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
G IIGK G T+ + + +SG++I +S S T +RI+ V G D + +A LI + +
Sbjct: 53 GCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMELILEKLL 112
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDM 119
+ N+ E++ ++RL+VP S CG IIGKGGS IK+ E S A + ++ +
Sbjct: 113 AEGEESNE-----AEARP-KVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNN 166
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIM---VDSPPK-GATIPYRPLPQNAGGPGLIGN 175
+R V + G D +AIY I + V PP + PY L G P G
Sbjct: 167 FVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL----GFPSYPGV 222
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
G P + N A+ G N GG R
Sbjct: 223 PVGYM-----IPQVPYN-----NAVNYGPNGYGG------------------------RY 248
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
QN + R S N Q+ +T + + +E IGAV+G+ G I EI + SGA I
Sbjct: 249 QNNKPSTPMR------SPANNDAQDSLT--IGIADEHIGAVVGRAGRNITEIIQASGARI 300
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+IS + +++R +T+TGT +AI A+ +I V
Sbjct: 301 KISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 337
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 49/262 (18%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
+++N+ + + + VPN G +IGKGG+ I + S A I+IS +DR +
Sbjct: 116 EESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLV 175
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 371
T+TG D A YLI + +D NL S P AGL +
Sbjct: 176 TVTGPLDHQMRAIYLILSKLS----------------EDVHYPPNLSSPFPYAGLGFPSY 219
Query: 372 ---PLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGP 428
P+ +PQ+ ++ + G +G G P
Sbjct: 220 PGVPVGYMIPQVP--------------------YNNAVNYGPNGYGGRYQNNKPSTPMRS 259
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPER 483
N Q + + + +G+++G++G + ++ + SG++I ISD + T ER
Sbjct: 260 PANN----DAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSER 315
Query: 484 IVTVIGSMDSLFRAFSLITKNI 505
VT+ G+ +++ A S+I + +
Sbjct: 316 KVTITGTSEAIQAAESMIMQRV 337
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
V N G +IGKGG+ I E + SGA I++S+S E +NDR I ++G D + A
Sbjct: 45 FLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAM 104
Query: 326 YLI 328
LI
Sbjct: 105 ELI 107
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
+++N+ + + + VPN G +IGKGG+ I + S A I+IS +DR +
Sbjct: 116 EESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLV 175
Query: 758 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 816
T+TG D A YLI + +D NL S P AGL +
Sbjct: 176 TVTGPLDHQMRAIYLILSKLS----------------EDVHYPPNLSSPFPYAGLGFPSY 219
Query: 817 ---PLAAALPQL 825
P+ +PQ+
Sbjct: 220 PGVPVGYMIPQV 231
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 81 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVT 138
LR +V + G IIGKGGS I + SGA + + + + P + +R + + G+ D V
Sbjct: 42 HLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVI 101
Query: 139 QAI 141
+A+
Sbjct: 102 KAM 104
>gi|62088704|dbj|BAD92799.1| heterogeneous nuclear ribonucleoprotein K isoform a variant [Homo
sapiens]
Length = 442
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 47 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 106
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 107 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 159
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 160 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 205
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 51 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 110
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 111 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 163
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 164 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 205
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 366 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 422
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 423 QNAQYLLQNSVK 434
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 366 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 422
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 423 QNAQYLLQNSVK 434
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 365 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 423
Query: 139 QAIY 142
A Y
Sbjct: 424 NAQY 427
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 365 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 423
Query: 584 QAIY 587
A Y
Sbjct: 424 NAQY 427
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 378 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 436
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 378 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 436
>gi|354500002|ref|XP_003512092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Cricetulus griseus]
Length = 440
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 105 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 158 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 109 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 162 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 139 QAIY 142
A Y
Sbjct: 422 NAQY 425
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 584 QAIY 587
A Y
Sbjct: 422 NAQY 425
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
>gi|449272169|gb|EMC82214.1| Heterogeneous nuclear ribonucleoprotein K [Columba livia]
Length = 422
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 101
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 102 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 154
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 155 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 46 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 106 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 158
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 159 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L ++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 352 ITTQVTIPKDLNLSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 408
Query: 322 ALAQYLI 328
AQYL+
Sbjct: 409 QNAQYLL 415
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L ++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 352 ITTQVTIPKDLNLSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 408
Query: 767 ALAQYLI 773
AQYL+
Sbjct: 409 QNAQYLL 415
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P SIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 351 IITTQVTIPKDLNLSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 409
Query: 139 QAIY 142
A Y
Sbjct: 410 NAQY 413
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P SIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 351 IITTQVTIPKDLNLSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 409
Query: 584 QAIY 587
A Y
Sbjct: 410 NAQY 413
>gi|74198765|dbj|BAE30613.1| unnamed protein product [Mus musculus]
Length = 450
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 105 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 158 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 109 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 162 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 139 QAIY 142
A Y
Sbjct: 422 NAQY 425
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 584 QAIY 587
A Y
Sbjct: 422 NAQY 425
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVK 432
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 506
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVK 432
>gi|354500004|ref|XP_003512093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 4
[Cricetulus griseus]
Length = 439
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 105 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 158 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 109 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 162 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 139 QAIY 142
A Y
Sbjct: 422 NAQY 425
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 584 QAIY 587
A Y
Sbjct: 422 NAQY 425
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
>gi|361132042|gb|EHL03657.1| putative Poly(rC)-binding protein 2 [Glarea lozoyensis 74030]
Length = 481
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 88/153 (57%), Gaps = 10/153 (6%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V +R+ SG+K +S+ ERI+TV G +D+ +AF
Sbjct: 120 HIRAVITSAEAATVIGKGGENVSLIRKMSGAKCTVSEYQKGAVERILTVSGVVDAAAKAF 179
Query: 499 SLITKNI--EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI + + EE K + ES+ LRL++P GSIIGKGG +I+ I+E SGA
Sbjct: 180 GLIIRTLNNEELDK------ASSAESRTYPLRLLIPHILIGSIIGKGGMRIREIQEASGA 233
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ + LP STER + + GV DAV A Y +
Sbjct: 234 RLNASDACLPLSTERSLVVLGVADAVHIATYYV 266
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 10/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI-- 60
E ++IGK GE V +R+ SG+K +S+ ERI+TV G +D+ +AF LI + +
Sbjct: 129 EAATVIGKGGENVSLIRKMSGAKCTVSEYQKGAVERILTVSGVVDAAAKAFGLIIRTLNN 188
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE K + ES+ LRL++P GSIIGKGG +I+ I+E SGA + + L
Sbjct: 189 EELDK------ASSAESRTYPLRLLIPHILIGSIIGKGGMRIREIQEASGARLNASDACL 242
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
P STER + + GV DAV A Y +
Sbjct: 243 PLSTERSLVVLGVADAVHIATYYV 266
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 407 LTQQIFIPNDMVGAIIGKGGQKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTQECN 463
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 464 QMALYMLYSRLE 475
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 407 LTQQIFIPNDMVGAIIGKGGQKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTQECN 463
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 464 QMALYMLYSRLE 475
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 206 LLIPHILIGSIIGKGGMRIREIQEASGA--RLNASDACLPLSTERSLVVLGVADAVHIAT 263
Query: 326 YLI 328
Y +
Sbjct: 264 YYV 266
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S +R++ + G DA+ +A
Sbjct: 206 LLIPHILIGSIIGKGGMRIREIQEASGA--RLNASDACLPLSTERSLVVLGVADAVHIAT 263
Query: 771 YLI 773
Y +
Sbjct: 264 YYV 266
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ +++ ++IGKGG + IR+ SGA V S+ + ER + + GV
Sbjct: 113 HDESSWIHIRAVITSAEAATVIGKGGENVSLIRKMSGAKCTV-SEYQKGAVERILTVSGV 171
Query: 134 PDAVTQAI 141
DA +A
Sbjct: 172 VDAAAKAF 179
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ ES I +R ++ +++ ++IGKGG + IR+ SGA V S+ + ER + + GV
Sbjct: 113 HDESSWIHIRAVITSAEAATVIGKGGENVSLIRKMSGAKCTV-SEYQKGAVERILTVSGV 171
Query: 579 PDAVTQAI 586
DA +A
Sbjct: 172 VDAAAKAF 179
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
Q + ++ +P G+IIGKGG +I IR+ SG SV ++ NS ER V I G
Sbjct: 405 QPLTQQIFIPNDMVGAIIGKGGQKINEIRQLSG-SVIKINEPQDNSNERLVTITG----- 458
Query: 138 TQAIYQICLIMVDS 151
TQ Q+ L M+ S
Sbjct: 459 TQECNQMALYMLYS 472
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
Q + ++ +P G+IIGKGG +I IR+ SG SV ++ NS ER V I G
Sbjct: 405 QPLTQQIFIPNDMVGAIIGKGGQKINEIRQLSG-SVIKINEPQDNSNERLVTITG----- 458
Query: 583 TQAIYQICLIMVDS 596
TQ Q+ L M+ S
Sbjct: 459 TQECNQMALYMLYS 472
>gi|363744460|ref|XP_003643054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Gallus gallus]
Length = 426
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 101
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 102 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 154
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 155 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 46 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 106 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 158
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 159 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 351 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 407
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 408 QNAQYLLQNSVK 419
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 351 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 407
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 408 QNAQYLLQNSVK 419
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 350 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 408
Query: 139 QAIY 142
A Y
Sbjct: 409 NAQY 412
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 350 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 408
Query: 584 QAIY 587
A Y
Sbjct: 409 NAQY 412
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 363 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 421
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 363 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 421
>gi|168277712|dbj|BAG10834.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|184186906|gb|ACC69193.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus]
Length = 440
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 105 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 158 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 109 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 162 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 139 QAIY 142
A Y
Sbjct: 422 NAQY 425
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 584 QAIY 587
A Y
Sbjct: 422 NAQY 425
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 152/340 (44%), Gaps = 84/340 (24%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG---------- 489
R++ G+++GS+IG+ GE VK+LR E+ +KI I ++ ER+VT+ G
Sbjct: 44 YRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEG 103
Query: 490 -------SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+ D+LF+ + E+FH +Q+ + Q + +L+VP+ Q G +IGK
Sbjct: 104 GGNYVSPAQDALFKVHDRVVA--EDFHGDQD-----DDGGQQVTAKLLVPSDQIGCVIGK 156
Query: 543 GGSQIKTIRETSGASVYVASD----MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
GGS ++ IR +GA + + D M S++ V I G V +A+YQI + D+P
Sbjct: 157 GGSIVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPS 216
Query: 599 K------GATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSG 652
+ A P + GPG GAP +G PL G S
Sbjct: 217 RSQHLLTSAVSGVYPAGGSLIGPG------------AGAPIVGIAPLVG---------SY 255
Query: 653 GGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMT 712
GG G ++ S+ PR++ ++ + + +
Sbjct: 256 GGYKGDTGDWPPRSMYSA-------PRDEASSK--------------------EFSVRLV 288
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 752
P IG VIGKGG I +IR+ SGA I++ S+ E ++
Sbjct: 289 CPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSTIEGDEC 328
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 84/334 (25%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG---------------- 44
G+++GS+IG+ GE VK+LR E+ +KI I ++ ER+VT+ G
Sbjct: 50 GRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEGGGNYVS 109
Query: 45 -SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 103
+ D+LF+ + E+FH +Q+ + Q + +L+VP+ Q G +IGKGGS ++
Sbjct: 110 PAQDALFKVHDRVVA--EDFHGDQD-----DDGGQQVTAKLLVPSDQIGCVIGKGGSIVQ 162
Query: 104 TIRETSGASVYVASD----MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK----- 154
IR +GA + + D M S++ V I G V +A+YQI + D+P +
Sbjct: 163 NIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQHLL 222
Query: 155 -GATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 213
A P + GPG GAP +G PL G S GG G
Sbjct: 223 TSAVSGVYPAGGSLIGPG------------AGAPIVGIAPLVG---------SYGGYKGD 261
Query: 214 LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELI 273
++ S+ PR++ ++ + + + P I
Sbjct: 262 TGDWPPRSMYSA-------PRDEASSK--------------------EFSVRLVCPTGNI 294
Query: 274 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 307
G VIGKGG I +IR+ SGA I++ S+ E ++
Sbjct: 295 GGVIGKGGMIINQIRQDSGATIKVDSSTIEGDEC 328
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 150/338 (44%), Gaps = 49/338 (14%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED--SNDRTITMTGTPD 319
+T ++ VP++ IG VIGKGG+ + IR +GA IRI K S+D + +TG D
Sbjct: 139 VTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDDHLPMCALSSDELVQITG--D 196
Query: 320 AIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQ 379
A + + L ++ L D+ S +L +SA ++ P +L
Sbjct: 197 AAVVKKALYQIASRL--------------HDNPSRSQHLLTSA----VSGVYPAGGSL-- 236
Query: 380 LAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYA--NIQTTG 437
PGA + ++ L G S GG G++G + P Y+ + +
Sbjct: 237 -----IGPGAGAPIVGIAPLVG--------SYGGYKGDTGDW---PPRSMYSAPRDEASS 280
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLF 495
+ +R + +G +IGK G + ++R++SG+ I + DSST E + I + +
Sbjct: 281 KEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKV-DSSTIEGDECLIAISTKEFFE 339
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
FS + ++ + + RL+VP ++ G +IGKGGS I +R +
Sbjct: 340 ETFSPTIEAAVRLQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLTK 399
Query: 556 ASVYVAS-DMLP---NSTEREVNIKGVPDAVTQAIYQI 589
A++ + S + LP N + V I G D A+ +
Sbjct: 400 ANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHV 437
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
+G +IGK G + ++R++SG+ I + DSST E + I + + FS +
Sbjct: 294 IGGVIGKGGMIINQIRQDSGATIKV-DSSTIEGDECLIAISTKEFFEETFSPTIEAAVRL 352
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS-DMLP- 121
++ + + RL+VP ++ G +IGKGGS I +R + A++ + S + LP
Sbjct: 353 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLTKANIRIISKENLPK 412
Query: 122 --NSTEREVNIKGVPDAVTQAIYQI 144
N + V I G D A+ +
Sbjct: 413 IANEDDEMVQISGDLDVAKDALVHV 437
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED--SNDRTITMTGTPD 764
+T ++ VP++ IG VIGKGG+ + IR +GA IRI K S+D + +TG
Sbjct: 139 VTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAA 198
Query: 765 AIALAQYLI 773
+ A Y I
Sbjct: 199 VVKKALYQI 207
>gi|363744462|ref|XP_425032.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Gallus gallus]
Length = 430
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 105 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 158 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 109 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 162 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 410
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 411 QNAQYLLQNSVK 422
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 410
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 411 QNAQYLLQNSVK 422
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 353 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 411
Query: 139 QAIY 142
A Y
Sbjct: 412 NAQY 415
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 353 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 411
Query: 584 QAIY 587
A Y
Sbjct: 412 NAQY 415
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 366 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 424
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 366 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 424
>gi|340521021|gb|EGR51256.1| predicted protein [Trichoderma reesei QM6a]
Length = 475
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V +R+ S +K +SD ERI+TV G +D++ +AF
Sbjct: 120 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIVDAVAKAF 179
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ S+ LRL++P GSIIGKGGS+I+ I+E SGA +
Sbjct: 180 GLIIRTL----NNEPLTEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARL 235
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ LP S+ER + + GV DAV A Y +
Sbjct: 236 NASDSCLPMSSERSLVVMGVADAVHIATYYV 266
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V +R+ S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 129 EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 186
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ S+ LRL++P GSIIGKGGS+I+ I+E SGA + + LP
Sbjct: 187 --NNEPLTEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGARLNASDSCLPM 244
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
S+ER + + GV DAV A Y +
Sbjct: 245 SSERSLVVMGVADAVHIATYYV 266
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 401 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI---NEPQDNSNERLVTITGTEECN 457
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 458 RMALYMLYSRLE 469
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 401 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI---NEPQDNSNERLVTITGTEECN 457
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 458 RMALYMLYSRLE 469
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG++I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 206 LLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 263
Query: 326 YLINMSVELLRANLNGEGGG 345
Y + + L LN GG
Sbjct: 264 YYVGST---LLEQLNERFGG 280
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG++I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 206 LLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 263
Query: 771 YLINMSVELLRANLNGEGGG 790
Y + + L LN GG
Sbjct: 264 YYVGST---LLEQLNERFGG 280
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ ES I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 113 HDESSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTV-SDYQKGAVERILTVSGI 171
Query: 134 PDAVTQAIYQICLIMVDSP 152
DAV +A I + + P
Sbjct: 172 VDAVAKAFGLIIRTLNNEP 190
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ ES I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 113 HDESSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTV-SDYQKGAVERILTVSGI 171
Query: 579 PDAVTQAIYQICLIMVDSP 597
DAV +A I + + P
Sbjct: 172 VDAVAKAFGLIIRTLNNEP 190
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I ++ +P G+IIGKGG +I IR+ SG+ + + ++ NS ER V I G +
Sbjct: 401 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI-NEPQDNSNERLVTITGTEECNRM 459
Query: 140 AIYQI 144
A+Y +
Sbjct: 460 ALYML 464
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I ++ +P G+IIGKGG +I IR+ SG+ + + ++ NS ER V I G +
Sbjct: 401 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI-NEPQDNSNERLVTITGTEECNRM 459
Query: 585 AIYQI 589
A+Y +
Sbjct: 460 ALYML 464
>gi|332236655|ref|XP_003267515.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Nomascus leucogenys]
gi|332832094|ref|XP_001154460.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 8 [Pan
troglodytes]
gi|338719652|ref|XP_003364039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Equus
caballus]
gi|397475607|ref|XP_003809225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5 [Pan
paniscus]
gi|402897763|ref|XP_003911914.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6
[Papio anubis]
gi|410978219|ref|XP_003995493.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Felis catus]
gi|426362137|ref|XP_004048237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Gorilla gorilla gorilla]
gi|26341878|dbj|BAC34601.1| unnamed protein product [Mus musculus]
gi|26353476|dbj|BAC40368.1| unnamed protein product [Mus musculus]
gi|194374597|dbj|BAG62413.1| unnamed protein product [Homo sapiens]
Length = 439
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 105 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 158 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 109 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 162 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 139 QAIY 142
A Y
Sbjct: 422 NAQY 425
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 584 QAIY 587
A Y
Sbjct: 422 NAQY 425
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 179/400 (44%), Gaps = 70/400 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG---------- 489
R++ ++ GSIIG+ GE K++R E+ + + I+++ ER+VT+
Sbjct: 20 YRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETNRIED 79
Query: 490 -------SMDSLFRAFSLITKNIEEFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIG 541
+ D+LF+ +I EEF + + G E Q + +R++VP+ Q G +IG
Sbjct: 80 DEDFVCPAFDALFKVHDMIVA--EEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIGCLIG 137
Query: 542 KGGSQIKTIRETSGASVYVASDMLPN-----STEREVNIKGVPDAVTQAIYQICLIMVDS 596
KGG I+ +R + A + V +D LP S + + I G P AV +A+YQ+ ++ D+
Sbjct: 138 KGGQVIQKLRNDTNAQIRVINDNLPICALALSHDELLQIIGDPSAVREALYQVAFLLYDN 197
Query: 597 PPK--------GATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAGLAALGL 647
P + +T+ ++P G L+ + AP D + + + +
Sbjct: 198 PSRFQNYFLSSSSTLQHQP------GGILMSPAITSSHKNYSAPRDAADARVFSICFICP 251
Query: 648 GGNSGGGMGGG---LNAAALAALASSQLKT---------------NHMPRNQNQNQNQHN 689
N GG +G G +N + A+ ++ T +Q+ N
Sbjct: 252 AENVGGVIGKGGCFINQTRQESGATIKVHTPETDEDDDCIIFISAKEFFEDQSPTVNAAL 311
Query: 690 R-NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
R R + + I+ + +P+ +G +IGKGG I E+R ++ A IRI + +
Sbjct: 312 RLQTRCSEKVGKDSSDSAISTRVLIPSSQVGCLIGKGGALISEMRSVTKANIRIFQGEDV 371
Query: 749 EE--DSNDRTITMTGTPDAI--ALAQYLINMSVELLRANL 784
N+ + +TG+ DA AL Q ++ LRAN+
Sbjct: 372 PRIARENEEMVQITGSLDAAIKALTQVMLR-----LRANV 406
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 176/393 (44%), Gaps = 70/393 (17%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG----------------- 44
++ GSIIG+ GE K++R E+ + + I+++ ER+VT+
Sbjct: 27 RKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETNRIEDDEDFVCP 86
Query: 45 SMDSLFRAFSLITKNIEEFHKNQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGSQIK 103
+ D+LF+ +I EEF + + G E Q + +R++VP+ Q G +IGKGG I+
Sbjct: 87 AFDALFKVHDMIVA--EEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIGCLIGKGGQVIQ 144
Query: 104 TIRETSGASVYVASDMLPN-----STEREVNIKGVPDAVTQAIYQICLIMVDSPPK---- 154
+R + A + V +D LP S + + I G P AV +A+YQ+ ++ D+P +
Sbjct: 145 KLRNDTNAQIRVINDNLPICALALSHDELLQIIGDPSAVREALYQVAFLLYDNPSRFQNY 204
Query: 155 ----GATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP-DMGNNPLAGLAALGLGGNSGGG 209
+T+ ++P G L+ + AP D + + + + N GG
Sbjct: 205 FLSSSSTLQHQP------GGILMSPAITSSHKNYSAPRDAADARVFSICFICPAENVGGV 258
Query: 210 MGGG---LNAAALAALASSQLKT---------------NHMPRNQNQNQNQHNR-NNRDG 250
+G G +N + A+ ++ T +Q+ N R R
Sbjct: 259 IGKGGCFINQTRQESGATIKVHTPETDEDDDCIIFISAKEFFEDQSPTVNAALRLQTRCS 318
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE--DSN 308
+ + I+ + +P+ +G +IGKGG I E+R ++ A IRI + + N
Sbjct: 319 EKVGKDSSDSAISTRVLIPSSQVGCLIGKGGALISEMRSVTKANIRIFQGEDVPRIAREN 378
Query: 309 DRTITMTGTPDAI--ALAQYLINMSVELLRANL 339
+ + +TG+ DA AL Q ++ LRAN+
Sbjct: 379 EEMVQITGSLDAAIKALTQVMLR-----LRANV 406
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 44/172 (25%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP-------- 481
Y+ QT V R ++ ++G +IGK G+ ++KLR ++ ++I + + + P
Sbjct: 115 YSERQTVTV----RMLVPSDQIGCLIGKGGQVIQKLRNDTNAQIRVINDNLPICALALSH 170
Query: 482 ERIVTVIGS----MDSLFRAFSLITKNIEEF---------------------------HK 510
+ ++ +IG ++L++ L+ N F HK
Sbjct: 171 DELLQIIGDPSAVREALYQVAFLLYDNPSRFQNYFLSSSSTLQHQPGGILMSPAITSSHK 230
Query: 511 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 562
N + ++++ + I PA G +IGKGG I R+ SGA++ V +
Sbjct: 231 NYSAPRDA-ADARVFSICFICPAENVGGVIGKGGCFINQTRQESGATIKVHT 281
>gi|398389867|ref|XP_003848394.1| hypothetical protein MYCGRDRAFT_111290 [Zymoseptoria tritici
IPO323]
gi|339468269|gb|EGP83370.1| hypothetical protein MYCGRDRAFT_111290 [Zymoseptoria tritici
IPO323]
Length = 879
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 408 GGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLRE 467
G S+ + +G Q P + Q +R I+ E ++IGK GE V ++R+
Sbjct: 103 GQSAANPTAANGAADSTSQAPMPYHQQDESSWLHVRAIISSAEAATVIGKGGENVTQIRK 162
Query: 468 ESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLI 525
+G+K +S+ + ERI+TV G +D++ +AF LI + + + +Q +S+
Sbjct: 163 MAGAKCTVSEYTRGAVERILTVSGLVDAVAKAFGLIIRTLNQEPLDQ----PSTPQSKTY 218
Query: 526 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
LRL++P GSIIGK G +I+ I+E SGA + + LP STER + + GV DAV A
Sbjct: 219 PLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPLSTERSLVVLGVADAVHIA 278
Query: 586 IYQICLIMVD 595
Y + +V+
Sbjct: 279 TYYVGSTLVE 288
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R+ +G+K +S+ + ERI+TV G +D++ +AF LI + + +
Sbjct: 145 EAATVIGKGGENVTQIRKMAGAKCTVSEYTRGAVERILTVSGLVDAVAKAFGLIIRTLNQ 204
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+Q +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 205 EPLDQ----PSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPL 260
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
STER + + GV DAV A Y + +V+
Sbjct: 261 STERSLVVLGVADAVHIATYYVGSTLVE 288
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES + +R I+ +++ ++IGKGG + IR+ +GA V S+ + ER + + G+ D
Sbjct: 131 ESSWLHVRAIISSAEAATVIGKGGENVTQIRKMAGAKCTV-SEYTRGAVERILTVSGLVD 189
Query: 136 AVTQAIYQICLIM----VDSP--PKGATIPYR 161
AV +A I + +D P P+ T P R
Sbjct: 190 AVAKAFGLIIRTLNQEPLDQPSTPQSKTYPLR 221
>gi|74225344|dbj|BAE31602.1| unnamed protein product [Mus musculus]
Length = 459
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 105 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 158 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 109 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 162 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 139 QAIY 142
A Y
Sbjct: 422 NAQY 425
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 584 QAIY 587
A Y
Sbjct: 422 NAQY 425
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVK 432
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 506
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVK 432
>gi|393908932|gb|EFO19357.2| hypothetical protein LOAG_09137 [Loa loa]
Length = 265
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 71/298 (23%)
Query: 39 IVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 98
+V ++ +++++ R +I I+E H NQ++ +L+++V S G++IG+G
Sbjct: 22 VVQLVATVENVVRCVEMIIARIDEVHDNQDRDS---------ELKVLVHQSHAGAVIGRG 72
Query: 99 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
GS+IK +RE +G + V S+ P STER + I G P+ + + I + + P KG +
Sbjct: 73 GSRIKELREENGVDLKVYSECCPQSTERIIQINGKPEKIVACLVTIISTLKEIPIKGPSR 132
Query: 159 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG-GMGGGLNAA 217
PY + + ++ N++G G G+ GG GM G
Sbjct: 133 PYESIFFDP----VVANEYG----------------------GYAGDHGGRGMRG----- 161
Query: 218 ALAALASSQLKTNHMPRNQ--NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGA 275
+ PR++ DGP + T ++TVPNEL G
Sbjct: 162 -------------YGPRSRIPLPPYGPVPPAYDDGPLE---------TAQVTVPNELGGT 199
Query: 276 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN-DRTITMTGTPDAIALAQYLINMSV 332
+IG+GG +I IR SGA I+I EEED N +R IT++GTP I +AQ+L+ V
Sbjct: 200 IIGRGGERIRRIRDESGAHIKI-----EEEDPNGERIITISGTPSQIEMAQFLLQQCV 252
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 71/298 (23%)
Query: 484 IVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
+V ++ +++++ R +I I+E H NQ++ +L+++V S G++IG+G
Sbjct: 22 VVQLVATVENVVRCVEMIIARIDEVHDNQDRDS---------ELKVLVHQSHAGAVIGRG 72
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
GS+IK +RE +G + V S+ P STER + I G P+ + + I + + P KG +
Sbjct: 73 GSRIKELREENGVDLKVYSECCPQSTERIIQINGKPEKIVACLVTIISTLKEIPIKGPSR 132
Query: 604 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG-GMGGGLNAA 662
PY + + ++ N++G G G+ GG GM G
Sbjct: 133 PYESIFFDP----VVANEYG----------------------GYAGDHGGRGMRG----- 161
Query: 663 ALAALASSQLKTNHMPRNQ--NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGA 720
+ PR++ DGP + T ++TVPNEL G
Sbjct: 162 -------------YGPRSRIPLPPYGPVPPAYDDGPLE---------TAQVTVPNELGGT 199
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN-DRTITMTGTPDAIALAQYLINMSV 777
+IG+GG +I IR SGA I+I EEED N +R IT++GTP I +AQ+L+ V
Sbjct: 200 IIGRGGERIRRIRDESGAHIKI-----EEEDPNGERIITISGTPSQIEMAQFLLQQCV 252
>gi|119583084|gb|EAW62680.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_f [Homo
sapiens]
Length = 440
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 105 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 158 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 109 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 162 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 62 EFHKNQNKHLGGNGES-----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
E+H + + GG G +I ++ +P GSIIGKGG +IK IR SGAS+ +
Sbjct: 342 EYHSYYS-YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI- 399
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIY 142
+ L S +R + I G D + A Y
Sbjct: 400 DEPLEGSEDRIITITGTQDQIQNAQY 425
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 507 EFHKNQNKHLGGNGES-----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
E+H + + GG G +I ++ +P GSIIGKGG +IK IR SGAS+ +
Sbjct: 342 EYHSYYS-YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI- 399
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIY 587
+ L S +R + I G D + A Y
Sbjct: 400 DEPLEGSEDRIITITGTQDQIQNAQY 425
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
>gi|320034805|gb|EFW16748.1| KH domain RNA-binding protein [Coccidioides posadasii str.
Silveira]
Length = 345
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 105/186 (56%), Gaps = 17/186 (9%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R I+ KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+
Sbjct: 50 LRAIVSTKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYG 109
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQ------LRLIVPASQCGSIIGKGGSQIKTIRET 553
++ K++ E +GG +IQ +RL++ +Q G+IIG+ G +IK I++
Sbjct: 110 MVAKSLLEGAPQMG--MGG-----IIQNNGTHPVRLLISHNQMGTIIGRNGLKIKCIQDA 162
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP-LPQN 611
SG + +MLP STER V ++G P+ + +A+++I ++D +G T+ Y P + N
Sbjct: 163 SGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRAN 222
Query: 612 AGGPGL 617
GG +
Sbjct: 223 VGGASM 228
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 101/179 (56%), Gaps = 17/179 (9%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G K +S +R++TV G + +A+ ++ K++
Sbjct: 57 KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKAYGMVAKSLL 116
Query: 62 EFHKNQNKHLGGNGESQLIQ------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
E +GG +IQ +RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 117 EGAPQMG--MGG-----IIQNNGTHPVRLLISHNQMGTIIGRNGLKIKCIQDASGVRMVA 169
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP-LPQNAGGPGL 172
+MLP STER V ++G P+ + +A+++I ++D +G T+ Y P + N GG +
Sbjct: 170 QKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRANVGGASM 228
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 156/348 (44%), Gaps = 63/348 (18%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
+R ++ G IIGK G T+ + + +SG++I +S S T +RI+ V G D +
Sbjct: 12 HLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVI 71
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
+A LI + + + N+ E++ ++RL+VP S CG IIGKGGS IK+ E S
Sbjct: 72 KAMELILEKLLAEGEESNE-----AEARP-KVRLVVPNSSCGGIIGKGGSTIKSFIEDSH 125
Query: 556 ASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIM---VDSPPK-GATIPYRPLP 609
A + ++ + +R V + G D +AIY I + V PP + PY L
Sbjct: 126 AGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL- 184
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
G P G G P + N A+ G N GG
Sbjct: 185 ---GFPSYPGVPVGYM-----IPQVPYN-----NAVNYGPNGYGG--------------- 216
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
R QN + R S N Q+ +T + + +E IGAV+G+ G I
Sbjct: 217 ---------RYQNNKPSTPMR------SPANNDAQDSLT--IGIADEHIGAVVGRAGRNI 259
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
EI + SGA I+IS + +++R +T+TGT +AI A+ +I V
Sbjct: 260 TEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 307
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 152/337 (45%), Gaps = 63/337 (18%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
G IIGK G T+ + + +SG++I +S S T +RI+ V G D + +A LI + +
Sbjct: 23 GCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMELILEKLL 82
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDM 119
+ N+ E++ ++RL+VP S CG IIGKGGS IK+ E S A + ++ +
Sbjct: 83 AEGEESNE-----AEARP-KVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNN 136
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIM---VDSPPK-GATIPYRPLPQNAGGPGLIGN 175
+R V + G D +AIY I + V PP + PY L G P G
Sbjct: 137 FVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGL----GFPSYPGV 192
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
G P + N A+ G N GG R
Sbjct: 193 PVGYM-----IPQVPYN-----NAVNYGPNGYGG------------------------RY 218
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
QN + R S N Q+ +T + + +E IGAV+G+ G I EI + SGA I
Sbjct: 219 QNNKPSTPMR------SPANNDAQDSLT--IGIADEHIGAVVGRAGRNITEIIQASGARI 270
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+IS + +++R +T+TGT +AI A+ +I V
Sbjct: 271 KISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRV 307
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 49/262 (18%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
+++N+ + + + VPN G +IGKGG+ I + S A I+IS +DR +
Sbjct: 86 EESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLV 145
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 371
T+TG D A YLI + +D NL S P AGL +
Sbjct: 146 TVTGPLDHQMRAIYLILSKLS----------------EDVHYPPNLSSPFPYAGLGFPSY 189
Query: 372 ---PLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGP 428
P+ +PQ+ A+N G GG N+ P P
Sbjct: 190 PGVPVGYMIPQVPY----NNAVN--------------YGPNGYGGRYQNNK-----PSTP 226
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPER 483
+ Q + + + +G+++G++G + ++ + SG++I ISD + T ER
Sbjct: 227 -MRSPANNDAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSER 285
Query: 484 IVTVIGSMDSLFRAFSLITKNI 505
VT+ G+ +++ A S+I + +
Sbjct: 286 KVTITGTSEAIQAAESMIMQRV 307
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 313
K + ++ V N G +IGKGG+ I E + SGA I++S+S E +NDR I
Sbjct: 3 KRDDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIM 62
Query: 314 MTGTPDAIALAQYLI 328
++G D + A LI
Sbjct: 63 VSGLFDEVIKAMELI 77
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 699 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 758
K + ++ V N G +IGKGG+ I E + SGA I++S+S E +NDR I
Sbjct: 3 KRDDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIM 62
Query: 759 MTGTPDAIALAQYLI 773
++G D + A LI
Sbjct: 63 VSGLFDEVIKAMELI 77
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
+++N+ + + + VPN G +IGKGG+ I + S A I+IS +DR +
Sbjct: 86 EESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLV 145
Query: 758 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 816
T+TG D A YLI + +D NL S P AGL +
Sbjct: 146 TVTGPLDHQMRAIYLILSKLS----------------EDVHYPPNLSSPFPYAGLGFPSY 189
Query: 817 ---PLAAALPQL 825
P+ +PQ+
Sbjct: 190 PGVPVGYMIPQV 201
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 81 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVT 138
LR +V + G IIGKGGS I + SGA + + + + P + +R + + G+ D V
Sbjct: 12 HLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVI 71
Query: 139 QAI 141
+A+
Sbjct: 72 KAM 74
>gi|149236583|ref|XP_001524169.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452545|gb|EDK46801.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 733
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R I KE +I+GK G + LRE++ +I +S++ PERIVTV G+ +++ RA+
Sbjct: 336 VRIICPVKEASTIVGKQGSKINHLREKANVRIQVSENIRDVPERIVTVRGTPENIARAYG 395
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + I ++ + N SQ L+L++P + G +IGK GS+ + I E S A +
Sbjct: 396 LIVRTI----LSEPEDEPANINSQQYTLKLLIPHALIGFLIGKQGSKFREIEENSAAKLK 451
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
A LP ST+R +++ GV DA+ A+Y + L++ D
Sbjct: 452 AAEQPLPYSTDRVLSVSGVGDAIHIAVYYLSLLLND 487
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 6/149 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +I+GK G + LRE++ +I +S++ PERIVTV G+ +++ RA+ LI + I
Sbjct: 343 KEASTIVGKQGSKINHLREKANVRIQVSENIRDVPERIVTVRGTPENIARAYGLIVRTI- 401
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
++ + N SQ L+L++P + G +IGK GS+ + I E S A + A LP
Sbjct: 402 ---LSEPEDEPANINSQQYTLKLLIPHALIGFLIGKQGSKFREIEENSAAKLKAAEQPLP 458
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVD 150
ST+R +++ GV DA+ A+Y + L++ D
Sbjct: 459 YSTDRVLSVSGVGDAIHIAVYYLSLLLND 487
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
++ I +R+I P + +I+GK GS+I +RE + + V S+ + + ER V ++G P+
Sbjct: 330 DASFISVRIICPVKEASTIVGKQGSKINHLREKANVRIQV-SENIRDVPERIVTVRGTPE 388
Query: 136 AVTQAIYQICLIMVDSP 152
+ +A I ++ P
Sbjct: 389 NIARAYGLIVRTILSEP 405
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
Q T ++ +P+ LIG +IGK G+K EI + S A ++ ++ S DR ++++G DA
Sbjct: 416 QYTLKLLIPHALIGFLIGKQGSKFREIEENSAAKLKAAEQPLPY--STDRVLSVSGVGDA 473
Query: 321 IALAQY----LINMSVELLR---------ANLNGEGGGESNM 349
I +A Y L+N ++L+ AN EGG +++
Sbjct: 474 IHIAVYYLSLLLNDHQDVLKKHKVILYNPANYRPEGGHANDL 515
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
Q T ++ +P+ LIG +IGK G+K EI + S A ++ ++ S DR ++++G DA
Sbjct: 416 QYTLKLLIPHALIGFLIGKQGSKFREIEENSAAKLKAAEQPLPY--STDRVLSVSGVGDA 473
Query: 766 IALAQY----LINMSVELLR---------ANLNGEGGGESNM 794
I +A Y L+N ++L+ AN EGG +++
Sbjct: 474 IHIAVYYLSLLLNDHQDVLKKHKVILYNPANYRPEGGHANDL 515
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 19/90 (21%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEED------------ 306
++ +++ V N LIG+VIG+GG I IR+ SG +RI E D
Sbjct: 645 DKYNQDVYVANSLIGSVIGRGGNNIKHIRENSGCTYVRI------EPDKGQSIMLGGRGL 698
Query: 307 SNDRTITMTGTPDAIALAQYLINMSVELLR 336
+N R +T+TG+ ++ A YLIN + R
Sbjct: 699 TNIRRLTLTGSLESFDKAIYLINQRINADR 728
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 19/90 (21%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEED------------ 751
++ +++ V N LIG+VIG+GG I IR+ SG +RI E D
Sbjct: 645 DKYNQDVYVANSLIGSVIGRGGNNIKHIRENSGCTYVRI------EPDKGQSIMLGGRGL 698
Query: 752 SNDRTITMTGTPDAIALAQYLINMSVELLR 781
+N R +T+TG+ ++ A YLIN + R
Sbjct: 699 TNIRRLTLTGSLESFDKAIYLINQRINADR 728
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 153/348 (43%), Gaps = 62/348 (17%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
+R ++ G IIGK G T+ + +SG++I +S S T +RI+ V G +
Sbjct: 41 HLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVM 100
Query: 496 RAFSLITKNI----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+A LI + + EEF++ + + ++RL+VP S CG IIGKGG+ IK+
Sbjct: 101 KAMELILEKLLAEGEEFNEAEARP----------KVRLVVPNSSCGGIIGKGGATIKSFI 150
Query: 552 ETSGASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
E S A + ++ + +R V + G D AI I + L
Sbjct: 151 EESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLIL---------------KKLS 195
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
++ P + + F P AGL G G M
Sbjct: 196 EDVHYPANLSSPF---------------PYAGLTFPSYPGVPVGYM---------IPQVP 231
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
N+ P N + Q+N+ + S +N+ Q +T + + +E IGAV+G+ G I
Sbjct: 232 YNNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLT--IGIADEHIGAVVGRAGRNI 289
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
EI + SGA I+IS + ++DR +T+TGT +AI A+ +I V
Sbjct: 290 TEIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 149/337 (44%), Gaps = 62/337 (18%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI- 60
G IIGK G T+ + +SG++I +S S T +RI+ V G + +A LI + +
Sbjct: 52 GCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKAMELILEKLL 111
Query: 61 ---EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA- 116
EEF++ + + ++RL+VP S CG IIGKGG+ IK+ E S A + ++
Sbjct: 112 AEGEEFNEAEARP----------KVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISP 161
Query: 117 -SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
+ +R V + G D AI I + L ++ P + +
Sbjct: 162 QDNNYVGLHDRLVTVTGTFDNQMNAIDLIL---------------KKLSEDVHYPANLSS 206
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
F P AGL G G M N+ P N
Sbjct: 207 PF---------------PYAGLTFPSYPGVPVGYM---------IPQVPYNNAVNYGPNN 242
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+ Q+N+ + S +N+ Q +T + + +E IGAV+G+ G I EI + SGA I
Sbjct: 243 GYGGRYQNNKPSTPMRSPASNEAQESLT--IGIADEHIGAVVGRAGRNITEIIQASGARI 300
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+IS + ++DR +T+TGT +AI A+ +I V
Sbjct: 301 KISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 58/267 (21%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
++ N+ + + + VPN G +IGKGG I + S A I+IS +DR +
Sbjct: 115 EEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLV 174
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 371
T+TGT D A ++L+ L+ +D NL S P AGL +
Sbjct: 175 TVTGTFDNQMNA-------IDLILKKLS---------EDVHYPANLSSPFPYAGLTFPSY 218
Query: 372 ---PLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG----- 423
P+ +PQ+ A+N G + G+GG
Sbjct: 219 PGVPVGYMIPQVPY----NNAVNY-----------------------GPNNGYGGRYQNN 251
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----S 478
P P + + Q + + + +G+++G++G + ++ + SG++I ISD S
Sbjct: 252 KPSTP-MRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIS 310
Query: 479 STPERIVTVIGSMDSLFRAFSLITKNI 505
T +R VT+ G+ +++ A S+I + +
Sbjct: 311 GTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S++ + ++ I V N G +IGKGG+ I + + SGA I++S+S E +NDR
Sbjct: 30 SEEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 89
Query: 312 ITMTGTPDAIALAQYLI 328
I ++G + A LI
Sbjct: 90 IMVSGLFGEVMKAMELI 106
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S++ + ++ I V N G +IGKGG+ I + + SGA I++S+S E +NDR
Sbjct: 30 SEEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 89
Query: 757 ITMTGTPDAIALAQYLI 773
I ++G + A LI
Sbjct: 90 IMVSGLFGEVMKAMELI 106
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
++ N+ + + + VPN G +IGKGG I + S A I+IS +DR +
Sbjct: 115 EEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLV 174
Query: 758 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 816
T+TGT D A ++L+ L+ +D NL S P AGL +
Sbjct: 175 TVTGTFDNQMNA-------IDLILKKLS---------EDVHYPANLSSPFPYAGLTFPSY 218
Query: 817 ---PLAAALPQL 825
P+ +PQ+
Sbjct: 219 PGVPVGYMIPQV 230
>gi|344231257|gb|EGV63139.1| hypothetical protein CANTEDRAFT_93908 [Candida tenuis ATCC 10573]
Length = 562
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
R KE G I+GK GE + +R+ + K+++SD+ PERIVTV GS +++ +AF
Sbjct: 143 FRMYCPVKEAGLIVGKKGEQINHIRDRANVKVFVSDNIKGVPERIVTVRGSAENVAKAFG 202
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
L + I + +++ + S LRL++P G IIGK GS+ + I E S A +
Sbjct: 203 LAVRAILDEPEDEASSIN----SSSYDLRLLIPHPLVGYIIGKQGSKFREIEENSAAKLK 258
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIY---QICLIMVDSPPKGATIPYRP 607
A LP ST+R + I GV DA+ A+Y Q+ L D+ K + Y P
Sbjct: 259 AAETPLPYSTDRILLINGVSDAIHIAVYYVAQVVLEHKDALSKQKIVFYNP 309
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G I+GK GE + +R+ + K+++SD+ PERIVTV GS +++ +AF L + I
Sbjct: 150 KEAGLIVGKKGEQINHIRDRANVKVFVSDNIKGVPERIVTVRGSAENVAKAFGLAVRAIL 209
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ +++ + S LRL++P G IIGK GS+ + I E S A + A LP
Sbjct: 210 DEPEDEASSIN----SSSYDLRLLIPHPLVGYIIGKQGSKFREIEENSAAKLKAAETPLP 265
Query: 122 NSTEREVNIKGVPDAVTQAIY---QICLIMVDSPPKGATIPYRP 162
ST+R + I GV DA+ A+Y Q+ L D+ K + Y P
Sbjct: 266 YSTDRILLINGVSDAIHIAVYYVAQVVLEHKDALSKQKIVFYNP 309
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
++ R+ P + G I+GK G QI IR+ + V+V SD + ER V ++G + V
Sbjct: 140 VVSFRMYCPVKEAGLIVGKKGEQINHIRDRANVKVFV-SDNIKGVPERIVTVRGSAENVA 198
Query: 139 QAIYQICLIMVDSPPKGAT 157
+A ++D P A+
Sbjct: 199 KAFGLAVRAILDEPEDEAS 217
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
++ R+ P + G I+GK G QI IR+ + V+V SD + ER V ++G + V
Sbjct: 140 VVSFRMYCPVKEAGLIVGKKGEQINHIRDRANVKVFV-SDNIKGVPERIVTVRGSAENVA 198
Query: 584 QAIYQICLIMVDSPPKGAT 602
+A ++D P A+
Sbjct: 199 KAFGLAVRAILDEPEDEAS 217
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ L+G +IGK G+K EI + S A ++ +++ S DR + + G DAI +A
Sbjct: 228 LLIPHPLVGYIIGKQGSKFREIEENSAAKLKAAETPLPY--STDRILLINGVSDAIHIAV 285
Query: 326 YLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
Y + V + L+ + + ++ N P+S PL+ L +P
Sbjct: 286 YYVAQVVLEHKDALSKQ-----KIVFYNPANYQPNSNPLSTLTGMSP 327
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ L+G +IGK G+K EI + S A ++ +++ S DR + + G DAI +A
Sbjct: 228 LLIPHPLVGYIIGKQGSKFREIEENSAAKLKAAETPLPY--STDRILLINGVSDAIHIAV 285
Query: 771 YLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
Y + V + L+ + + ++ N P+S PL+ L +P
Sbjct: 286 YYVAQVVLEHKDALSKQ-----KIVFYNPANYQPNSNPLSTLTGMSP 327
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 51/188 (27%)
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
M N MG MGN+P+A N+ GM + A A+ + P N N
Sbjct: 383 MGNPTMGNAHMGNSPMA---------NNSMGMQNPQSPYA-ASKQPYNFQMMFQPSN-NP 431
Query: 239 NQNQHNRNNRDGPSQKTNQQQ--------------------NQITKEMTVPNELIGAVIG 278
QN ++R + P Q+ + ++ +++ V N IG+VIG
Sbjct: 432 QQNYNSRQPINAPPQQAYTDELGNSMVGEVLTHPLVPSGSGDKYNQDVFVANNSIGSVIG 491
Query: 279 KGGTKIFEIRKISGA-MIRISKSSEEEEDSND-------------RTITMTGTPDAIALA 324
KGG I +IR+ SG ++I E D D R +T+TG+ ++I A
Sbjct: 492 KGGNNIKQIRETSGCTYVKI------EPDRGDTMMLGGGRGRLNMRKLTLTGSLNSINTA 545
Query: 325 QYLINMSV 332
YLIN +
Sbjct: 546 IYLINQRI 553
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 51/188 (27%)
Query: 624 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 683
M N MG MGN+P+A N+ GM + A A+ + P N N
Sbjct: 383 MGNPTMGNAHMGNSPMA---------NNSMGMQNPQSPYA-ASKQPYNFQMMFQPSN-NP 431
Query: 684 NQNQHNRNNRDGPSQKTNQQQ--------------------NQITKEMTVPNELIGAVIG 723
QN ++R + P Q+ + ++ +++ V N IG+VIG
Sbjct: 432 QQNYNSRQPINAPPQQAYTDELGNSMVGEVLTHPLVPSGSGDKYNQDVFVANNSIGSVIG 491
Query: 724 KGGTKIFEIRKISGA-MIRISKSSEEEEDSND-------------RTITMTGTPDAIALA 769
KGG I +IR+ SG ++I E D D R +T+TG+ ++I A
Sbjct: 492 KGGNNIKQIRETSGCTYVKI------EPDRGDTMMLGGGRGRLNMRKLTLTGSLNSINTA 545
Query: 770 QYLINMSV 777
YLIN +
Sbjct: 546 IYLINQRI 553
>gi|396493434|ref|XP_003844034.1| hypothetical protein LEMA_P016850.1 [Leptosphaeria maculans JN3]
gi|312220614|emb|CBY00555.1| hypothetical protein LEMA_P016850.1 [Leptosphaeria maculans JN3]
Length = 245
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 124/263 (47%), Gaps = 46/263 (17%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
+RL++ +Q G+IIG+ G +IK I++ SG + +MLP STER V ++G P + +AI
Sbjct: 15 IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGSPGGIEKAI 74
Query: 142 YQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAAL 200
++I ++D +G T+ Y P ++ P G PL+
Sbjct: 75 WEIGKCLIDDHERGYGTVLYNP-------------------AVRVQPGAGAGPLSNGG-- 113
Query: 201 GLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQ-----KT 255
A S +T H + R+ D S+ T
Sbjct: 114 ---------------PAGGLGGGRSYNRTGHGADFSDAPPAFTRRSGSDAASRPPPPTHT 158
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
+ T+ +++P++++G +IG+GGTKI EIRK SGA I I+K+ +D+ +R T+T
Sbjct: 159 EDGEEMQTQNISIPSDMVGCIIGRGGTKISEIRKTSGARISIAKAP--HDDTGERMFTIT 216
Query: 316 GTPDAIALAQYLI--NMSVELLR 336
G+ A A YL+ N+ E +R
Sbjct: 217 GSASANEKALYLLYENLEAEKMR 239
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 124/263 (47%), Gaps = 46/263 (17%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 586
+RL++ +Q G+IIG+ G +IK I++ SG + +MLP STER V ++G P + +AI
Sbjct: 15 IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGSPGGIEKAI 74
Query: 587 YQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAAL 645
++I ++D +G T+ Y P ++ P G PL+
Sbjct: 75 WEIGKCLIDDHERGYGTVLYNP-------------------AVRVQPGAGAGPLSNGG-- 113
Query: 646 GLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQ-----KT 700
A S +T H + R+ D S+ T
Sbjct: 114 ---------------PAGGLGGGRSYNRTGHGADFSDAPPAFTRRSGSDAASRPPPPTHT 158
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 760
+ T+ +++P++++G +IG+GGTKI EIRK SGA I I+K+ +D+ +R T+T
Sbjct: 159 EDGEEMQTQNISIPSDMVGCIIGRGGTKISEIRKTSGARISIAKAP--HDDTGERMFTIT 216
Query: 761 GTPDAIALAQYLI--NMSVELLR 781
G+ A A YL+ N+ E +R
Sbjct: 217 GSASANEKALYLLYENLEAEKMR 239
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNIE 61
VG IIG+ G + ++R+ SG++I I+ + T ER+ T+ GS + +A L+ +N+E
Sbjct: 176 VGCIIGRGGTKISEIRKTSGARISIAKAPHDDTGERMFTITGSASANEKALYLLYENLE 234
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNIE 506
VG IIG+ G + ++R+ SG++I I+ + T ER+ T+ GS + +A L+ +N+E
Sbjct: 176 VGCIIGRGGTKISEIRKTSGARISIAKAPHDDTGERMFTITGSASANEKALYLLYENLE 234
>gi|256083127|ref|XP_002577801.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230297|emb|CCD76468.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 363
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 13/165 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K G IIGK GE +KK+REE K+ I DS+ PER++ + G + S+ F
Sbjct: 11 LRFLISTKAAGVIIGKGGENIKKIREEYSVKVTIPDSNGPERVLVLDGDLGSVIEIFR-- 68
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+N+E+ N++ + LRL+V SQ G +IG+ G +IK +RE SG
Sbjct: 69 -ENLEKMQSNRDDG---------VDLRLLVHQSQAGCVIGRAGYKIKELREQSGLHTLKV 118
Query: 562 SDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
ML P ST+R + + G V + I ++ +PPKG+ Y
Sbjct: 119 YQMLCPCSTDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNY 163
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G IIGK GE +KK+REE K+ I DS+ PER++ + G + S+ F +N+E+
Sbjct: 18 KAAGVIIGKGGENIKKIREEYSVKVTIPDSNGPERVLVLDGDLGSVIEIFR---ENLEKM 74
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML-PN 122
N++ + LRL+V SQ G +IG+ G +IK +RE SG ML P
Sbjct: 75 QSNRDDG---------VDLRLLVHQSQAGCVIGRAGYKIKELREQSGLHTLKVYQMLCPC 125
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
ST+R + + G V + I ++ +PPKG+ Y
Sbjct: 126 STDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNY 163
>gi|426219907|ref|XP_004004159.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Ovis aries]
Length = 439
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 105 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 158 QECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 109 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 162 PQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 203
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 420
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 421 QNAQYLLQNSVK 432
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 139 QAIY 142
A Y
Sbjct: 422 NAQY 425
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 363 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 421
Query: 584 QAIY 587
A Y
Sbjct: 422 NAQY 425
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 376 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 434
>gi|312096639|ref|XP_003148731.1| hypothetical protein LOAG_13173 [Loa loa]
Length = 101
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
EVGSIIGK G+ +K +R++SG+KI ISD S PERIVT+ GS ++ +AF +I +++
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSTGTINKAFIMICAKLQQ-- 58
Query: 65 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 108
+ L + I +RLIVPA+QCG IIGKGGS+IK IRE
Sbjct: 59 --DLQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREV 100
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
EVGSIIGK G+ +K +R++SG+KI ISD S PERIVT+ GS ++ +AF +I +++
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSTGTINKAFIMICAKLQQ-- 58
Query: 510 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
+ L + I +RLIVPA+QCG IIGKGGS+IK IRE
Sbjct: 59 --DLQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREV 100
>gi|342880970|gb|EGU81981.1| hypothetical protein FOXB_07505 [Fusarium oxysporum Fo5176]
Length = 471
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 8/161 (4%)
Query: 431 ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVI 488
A+ +T+ + +R ++ E ++IGK GE V +R+ S +K +SD ERI+TV
Sbjct: 104 AHDETSWIH--IRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAVERILTVS 161
Query: 489 GSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
G +D++ +AF LI + + N+ + S+ LRL++P GSIIGKGG++I+
Sbjct: 162 GIVDAVAKAFGLIIRTL----NNEPLNESSTASSKTYPLRLLIPHILIGSIIGKGGARIR 217
Query: 549 TIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
I+E SGA + + LP S+ER + + GV DAV A Y +
Sbjct: 218 EIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATYYV 258
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 121 EAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 178
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + S+ LRL++P GSIIGKGG++I+ I+E SGA + + LP
Sbjct: 179 --NNEPLNESSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPM 236
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
S+ER + + GV DAV A Y +
Sbjct: 237 SSERSLVVMGVADAVHIATYYV 258
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
+ E+ I +R ++ + + ++IGKGG + IR+ S A V SD + ER + +
Sbjct: 103 AAHDETSWIHIRAVISSPEAATVIGKGGENVSNIRKLSNAKCTV-SDYQKGAVERILTVS 161
Query: 132 GVPDAVTQAIYQICLIMVDSP 152
G+ DAV +A I + + P
Sbjct: 162 GIVDAVAKAFGLIIRTLNNEP 182
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+ E+ I +R ++ + + ++IGKGG + IR+ S A V SD + ER + +
Sbjct: 103 AAHDETSWIHIRAVISSPEAATVIGKGGENVSNIRKLSNAKCTV-SDYQKGAVERILTVS 161
Query: 577 GVPDAVTQAIYQICLIMVDSP 597
G+ DAV +A I + + P
Sbjct: 162 GIVDAVAKAFGLIIRTLNNEP 182
>gi|256083125|ref|XP_002577800.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230298|emb|CCD76469.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 371
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 13/165 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K G IIGK GE +KK+REE K+ I DS+ PER++ + G + S+ F
Sbjct: 11 LRFLISTKAAGVIIGKGGENIKKIREEYSVKVTIPDSNGPERVLVLDGDLGSVIEIFR-- 68
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+N+E+ N++ + LRL+V SQ G +IG+ G +IK +RE SG
Sbjct: 69 -ENLEKMQSNRDDG---------VDLRLLVHQSQAGCVIGRAGYKIKELREQSGLHTLKV 118
Query: 562 SDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
ML P ST+R + + G V + I ++ +PPKG+ Y
Sbjct: 119 YQMLCPCSTDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNY 163
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G IIGK GE +KK+REE K+ I DS+ PER++ + G + S+ F +N+E+
Sbjct: 18 KAAGVIIGKGGENIKKIREEYSVKVTIPDSNGPERVLVLDGDLGSVIEIFR---ENLEKM 74
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML-PN 122
N++ + LRL+V SQ G +IG+ G +IK +RE SG ML P
Sbjct: 75 QSNRDDG---------VDLRLLVHQSQAGCVIGRAGYKIKELREQSGLHTLKVYQMLCPC 125
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
ST+R + + G V + I ++ +PPKG+ Y
Sbjct: 126 STDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNY 163
>gi|71897277|ref|NP_001026556.1| heterogeneous nuclear ribonucleoprotein K [Gallus gallus]
gi|75571241|sp|Q5ZIQ3.1|HNRPK_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|53135051|emb|CAG32390.1| hypothetical protein RCJMB04_24e23 [Gallus gallus]
Length = 427
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ +++ I
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADTETIGEILKKI 101
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 102 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 154
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 155 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ +++ I +
Sbjct: 46 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADTETIGEILKKIIPTL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 106 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 158
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 159 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 408
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 409 QNAQYLLQNSVK 420
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 408
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 409 QNAQYLLQNSVK 420
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 351 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 409
Query: 139 QAIY 142
A Y
Sbjct: 410 NAQY 413
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 351 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 409
Query: 584 QAIY 587
A Y
Sbjct: 410 NAQY 413
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 364 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 422
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 364 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 422
>gi|256083129|ref|XP_002577802.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230296|emb|CCD76467.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 368
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 13/165 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K G IIGK GE +KK+REE K+ I DS+ PER++ + G + S+ F
Sbjct: 11 LRFLISTKAAGVIIGKGGENIKKIREEYSVKVTIPDSNGPERVLVLDGDLGSVIEIFR-- 68
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+N+E+ N++ + LRL+V SQ G +IG+ G +IK +RE SG
Sbjct: 69 -ENLEKMQSNRDDG---------VDLRLLVHQSQAGCVIGRAGYKIKELREQSGLHTLKV 118
Query: 562 SDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
ML P ST+R + + G V + I ++ +PPKG+ Y
Sbjct: 119 YQMLCPCSTDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNY 163
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G IIGK GE +KK+REE K+ I DS+ PER++ + G + S+ F +N+E+
Sbjct: 18 KAAGVIIGKGGENIKKIREEYSVKVTIPDSNGPERVLVLDGDLGSVIEIFR---ENLEKM 74
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML-PN 122
N++ + LRL+V SQ G +IG+ G +IK +RE SG ML P
Sbjct: 75 QSNRDDG---------VDLRLLVHQSQAGCVIGRAGYKIKELREQSGLHTLKVYQMLCPC 125
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
ST+R + + G V + I ++ +PPKG+ Y
Sbjct: 126 STDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNY 163
>gi|256083131|ref|XP_002577803.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230295|emb|CCD76466.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 322
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 13/165 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K G IIGK GE +KK+REE K+ I DS+ PER++ + G + S+ F
Sbjct: 11 LRFLISTKAAGVIIGKGGENIKKIREEYSVKVTIPDSNGPERVLVLDGDLGSVIEIFR-- 68
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+N+E+ N++ + LRL+V SQ G +IG+ G +IK +RE SG
Sbjct: 69 -ENLEKMQSNRDDG---------VDLRLLVHQSQAGCVIGRAGYKIKELREQSGLHTLKV 118
Query: 562 SDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
ML P ST+R + + G V + I ++ +PPKG+ Y
Sbjct: 119 YQMLCPCSTDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNY 163
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G IIGK GE +KK+REE K+ I DS+ PER++ + G + S+ F +N+E+
Sbjct: 18 KAAGVIIGKGGENIKKIREEYSVKVTIPDSNGPERVLVLDGDLGSVIEIFR---ENLEKM 74
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML-PN 122
N++ + LRL+V SQ G +IG+ G +IK +RE SG ML P
Sbjct: 75 QSNRDDG---------VDLRLLVHQSQAGCVIGRAGYKIKELREQSGLHTLKVYQMLCPC 125
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
ST+R + + G V + I ++ +PPKG+ Y
Sbjct: 126 STDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNY 163
>gi|255732373|ref|XP_002551110.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131396|gb|EER30956.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 576
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
R KE +I+GK GET+ LRE++ +I +SD+ PERIVTV G +++ RAF
Sbjct: 181 FRMYCPVKEASAIVGKKGETISHLREKAAVRITVSDNLKGVPERIVTVKGPAENVARAFG 240
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LIT+ I N+ + + S L+L++P G IIGK G + + I E S A +
Sbjct: 241 LITRVI----LNEPEDEPASINSLQYNLKLLIPHPLIGFIIGKSGLKFREIEENSAAKLK 296
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
A LP ST+R +++ GV DA+ A+Y I ++++
Sbjct: 297 AAETPLPYSTDRVLSVMGVGDAIHIAVYYISQVILE 332
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +I+GK GET+ LRE++ +I +SD+ PERIVTV G +++ RAF LIT+ I
Sbjct: 188 KEASAIVGKKGETISHLREKAAVRITVSDNLKGVPERIVTVKGPAENVARAFGLITRVI- 246
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
N+ + + S L+L++P G IIGK G + + I E S A + A LP
Sbjct: 247 ---LNEPEDEPASINSLQYNLKLLIPHPLIGFIIGKSGLKFREIEENSAAKLKAAETPLP 303
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVD 150
ST+R +++ GV DA+ A+Y I ++++
Sbjct: 304 YSTDRVLSVMGVGDAIHIAVYYISQVILE 332
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
Q ++ +P+ LIG +IGK G K EI + S A ++ +++ S DR +++ G DA
Sbjct: 261 QYNLKLLIPHPLIGFIIGKSGLKFREIEENSAAKLKAAETPLPY--STDRVLSVMGVGDA 318
Query: 321 IALAQYLINMSV----ELLRAN 338
I +A Y I+ + E+L+ N
Sbjct: 319 IHIAVYYISQVILEHQEVLKKN 340
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
Q ++ +P+ LIG +IGK G K EI + S A ++ +++ S DR +++ G DA
Sbjct: 261 QYNLKLLIPHPLIGFIIGKSGLKFREIEENSAAKLKAAETPLPY--STDRVLSVMGVGDA 318
Query: 766 IALAQYLINMSV----ELLRAN 783
I +A Y I+ + E+L+ N
Sbjct: 319 IHIAVYYISQVILEHQEVLKKN 340
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+ R+ P + +I+GK G I +RE + + V SD L ER V +KG + V
Sbjct: 178 FVSFRMYCPVKEASAIVGKKGETISHLREKAAVRITV-SDNLKGVPERIVTVKGPAENVA 236
Query: 139 QAIYQICLIMVDSP 152
+A I ++++ P
Sbjct: 237 RAFGLITRVILNEP 250
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+ R+ P + +I+GK G I +RE + + V SD L ER V +KG + V
Sbjct: 178 FVSFRMYCPVKEASAIVGKKGETISHLREKAAVRITV-SDNLKGVPERIVTVKGPAENVA 236
Query: 584 QAIYQICLIMVDSP 597
+A I ++++ P
Sbjct: 237 RAFGLITRVILNEP 250
>gi|71019141|ref|XP_759801.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
gi|46099599|gb|EAK84832.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
Length = 442
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 102/184 (55%), Gaps = 6/184 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAF 498
++R ++ KE G IIGK G V +LRE++G K +S +R+++V G++ + AF
Sbjct: 53 QLRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSKVVPGVHDRVLSVTGTLVGISDAF 112
Query: 499 SLITKNIEEFHKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
+LI K I E N G+ +Q +RL++ + G++IG+ G +IK I++ SG
Sbjct: 113 ALIAKTILENPLNAPVQADGSPAEAAAQTTSVRLLISHNLMGTVIGRQGLKIKHIQDLSG 172
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP 615
A + + +MLP STER V ++G DA+ AI++I + + + + LP GP
Sbjct: 173 ARMVASKEMLPQSTERVVEVQGSVDAIRVAIHEIAKCLAEDWDRAQNVVLY-LPGQGDGP 231
Query: 616 GLIG 619
G++
Sbjct: 232 GILA 235
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 6/176 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G V +LRE++G K +S +R+++V G++ + AF+LI K I
Sbjct: 61 KEAGIIIGKGGANVAELREQTGVKAGVSKVVPGVHDRVLSVTGTLVGISDAFALIAKTIL 120
Query: 62 EFHKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
E N G+ +Q +RL++ + G++IG+ G +IK I++ SGA + + +
Sbjct: 121 ENPLNAPVQADGSPAEAAAQTTSVRLLISHNLMGTVIGRQGLKIKHIQDLSGARMVASKE 180
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIG 174
MLP STER V ++G DA+ AI++I + + + + LP GPG++
Sbjct: 181 MLPQSTERVVEVQGSVDAIRVAIHEIAKCLAEDWDRAQNVVLY-LPGQGDGPGILA 235
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+QLR +V + G IIGKGG+ + +RE +G V S ++P +R +++ G ++
Sbjct: 52 LQLRALVSTKEAGIIIGKGGANVAELREQTGVKAGV-SKVVPGVHDRVLSVTGTLVGISD 110
Query: 140 AIYQICLIMVDSP 152
A I ++++P
Sbjct: 111 AFALIAKTILENP 123
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+QLR +V + G IIGKGG+ + +RE +G V S ++P +R +++ G ++
Sbjct: 52 LQLRALVSTKEAGIIIGKGGANVAELREQTGVKAGV-SKVVPGVHDRVLSVTGTLVGISD 110
Query: 585 AIYQICLIMVDSP 597
A I ++++P
Sbjct: 111 AFALIAKTILENP 123
>gi|313239007|emb|CBY13992.1| unnamed protein product [Oikopleura dioica]
Length = 386
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 7/169 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV-IGSMDSLFRAFSL 500
R ++ K G+IIG+ G T++ LREE + I I ++ PER++ + + S ++L
Sbjct: 98 CRFLIPSKVAGAIIGRGGATIRALREEYQAIINIPEARAPERVLKICVNSRETLH----T 153
Query: 501 ITKNIEEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
I I E KN+N NG + +LR++V +SQ G+IIG GS +K +RET+G+ +
Sbjct: 154 IVSQIAEILKNENAKGSHNGRRKEGETELRILVQSSQAGAIIGTKGSTVKNLRETTGSRI 213
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ + PNS+ER I G P V + I I I+ P KG Y P
Sbjct: 214 NINPECCPNSSERVAAIMGPPATVVKCISMIYDILERVPAKGNEQRYDP 262
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV-IGSMDSLFRAFSLITKNIEE 62
K G+IIG+ G T++ LREE + I I ++ PER++ + + S ++L I I E
Sbjct: 105 KVAGAIIGRGGATIRALREEYQAIINIPEARAPERVLKICVNSRETLH----TIVSQIAE 160
Query: 63 FHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
KN+N NG + +LR++V +SQ G+IIG GS +K +RET+G+ + + +
Sbjct: 161 ILKNENAKGSHNGRRKEGETELRILVQSSQAGAIIGTKGSTVKNLRETTGSRININPECC 220
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
PNS+ER I G P V + I I I+ P KG Y P
Sbjct: 221 PNSSERVAAIMGPPATVVKCISMIYDILERVPAKGNEQRYDP 262
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+Q + G+IIG G TVK LRE +GS+I I+ P ER+ ++G ++ + S+I
Sbjct: 186 VQSSQAGAIIGTKGSTVKNLRETTGSRININPECCPNSSERVAAIMGPPATVVKCISMIY 245
Query: 58 KNIE 61
+E
Sbjct: 246 DILE 249
>gi|50292201|ref|XP_448533.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527845|emb|CAG61494.1| unnamed protein product [Candida glabrata]
Length = 460
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 178/398 (44%), Gaps = 60/398 (15%)
Query: 432 NIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG 489
NIQ+ + RM ++ K+ I+G GE++ KL+E++ +KI +S + PER++ V G
Sbjct: 75 NIQSQDISLRMLCLV--KQASIIVGPKGESINKLKEQTSTKINVSPNIRGVPERVIHVKG 132
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHL------------GGNGESQLIQLRLIVPASQCG 537
S +++ +AF I + I E N + + E + L L++ + G
Sbjct: 133 SCENVGKAFGKIARIIIEKDSKNNANQSSSSLDSEASQNSSDAEDTTLILNLLISHALMG 192
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IGKGGSQ++ I E S A +Y + + L S +R ++I GVPDA+ A Y + +++
Sbjct: 193 SVIGKGGSQLREIEERSAAKLYASPNQLMMSNDRILSITGVPDAIHIATYYVAQSLLNCR 252
Query: 598 ---PKGATIPYRPLPQNAGGPGLIG----NQFGMQNSLMGAP-DMGNNP----------- 638
+ +I Y+P + P G N+F Q P D N P
Sbjct: 253 EELKQRKSIFYQPSQMGSALPNSYGAQMYNKFPHQMHHQYHPMDKYNTPRNKKSHRLPRP 312
Query: 639 ---LAGLAALGLGGNSGGGM-------GGGLNAAALAALASSQLKTNHMP--RNQNQNQN 686
LA + G++ G +A A A S T ++P R + +N
Sbjct: 313 QSMLANNVPPSINGHAFHDEYMNRPESGQIHYTSANVASAPSFTPTRNIPNVRIVDNPEN 372
Query: 687 QHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSS 746
+N P + +++ + +G +IGK G I +++ +G I I
Sbjct: 373 NMAYSNPIAP----------VKQDIYIDENFVGNIIGKEGKHINSVKESTGCAIFIDNRI 422
Query: 747 EEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
E ++R +T+ GT A+ A LI+ +E+ RAN
Sbjct: 423 ---EGVSERKLTIKGTYMALQAAIMLISNKIEIDRANF 457
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 169/381 (44%), Gaps = 58/381 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ I+G GE++ KL+E++ +KI +S + PER++ V GS +++ +AF I + I
Sbjct: 90 KQASIIVGPKGESINKLKEQTSTKINVSPNIRGVPERVIHVKGSCENVGKAFGKIARIII 149
Query: 62 EFHKNQNKHL------------GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
E N + + E + L L++ + GS+IGKGGSQ++ I E S
Sbjct: 150 EKDSKNNANQSSSSLDSEASQNSSDAEDTTLILNLLISHALMGSVIGKGGSQLREIEERS 209
Query: 110 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP---PKGATIPYRPLPQN 166
A +Y + + L S +R ++I GVPDA+ A Y + +++ + +I Y+P
Sbjct: 210 AAKLYASPNQLMMSNDRILSITGVPDAIHIATYYVAQSLLNCREELKQRKSIFYQPSQMG 269
Query: 167 AGGPGLIG----NQFGMQNSLMGAP-DMGNNP--------------LAGLAALGLGGNSG 207
+ P G N+F Q P D N P LA + G++
Sbjct: 270 SALPNSYGAQMYNKFPHQMHHQYHPMDKYNTPRNKKSHRLPRPQSMLANNVPPSINGHAF 329
Query: 208 GGM-------GGGLNAAALAALASSQLKTNHMP--RNQNQNQNQHNRNNRDGPSQKTNQQ 258
G +A A A S T ++P R + +N +N P
Sbjct: 330 HDEYMNRPESGQIHYTSANVASAPSFTPTRNIPNVRIVDNPENNMAYSNPIAP------- 382
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
+ +++ + +G +IGK G I +++ +G I I E ++R +T+ GT
Sbjct: 383 ---VKQDIYIDENFVGNIIGKEGKHINSVKESTGCAIFIDNRI---EGVSERKLTIKGTY 436
Query: 319 DAIALAQYLINMSVELLRANL 339
A+ A LI+ +E+ RAN
Sbjct: 437 MALQAAIMLISNKIEIDRANF 457
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 153/336 (45%), Gaps = 76/336 (22%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG---------- 489
R++ G+++GS+IG+ GE VK+LR E+ +KI I ++ ER+VT+
Sbjct: 44 YRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETNAVEG 103
Query: 490 -------SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+ D+LF+ + E+FH +Q+ + Q + +L+VP+ Q G +IGK
Sbjct: 104 GGNYVSPAQDALFKVHDRVVA--EDFHGDQD-----DDGGQQVTAKLLVPSDQIGCVIGK 156
Query: 543 GGSQIKTIRETSGASVYVASD----MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
GGS ++ IR +GA + + D + S++ V I G V +A+ QI + D+P
Sbjct: 157 GGSIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDNPS 216
Query: 599 KGATIPYRPLP--QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
+ + +P AGG LIG GAP +G PL G A G G++G
Sbjct: 217 RSQHLLTSAVPGVYPAGG-SLIGPG-------AGAPIVGIAPLVG-AYGGYKGDTG---- 263
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
+ PR+ RD S K + + + P
Sbjct: 264 ------------------DWPPRSMYSAP-------RDEASTK------EFSVRLVCPTG 292
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 752
IG VIGKGG I +IR+ SGA I++ S+ E ++
Sbjct: 293 NIGGVIGKGGMIINQIRQESGATIKVDSSTTEGDEC 328
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 150/330 (45%), Gaps = 76/330 (23%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG---------------- 44
G+++GS+IG+ GE VK+LR E+ +KI I ++ ER+VT+
Sbjct: 50 GRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETNAVEGGGNYVS 109
Query: 45 -SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 103
+ D+LF+ + E+FH +Q+ + Q + +L+VP+ Q G +IGKGGS ++
Sbjct: 110 PAQDALFKVHDRVVA--EDFHGDQD-----DDGGQQVTAKLLVPSDQIGCVIGKGGSIVQ 162
Query: 104 TIRETSGASVYVASD----MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 159
IR +GA + + D + S++ V I G V +A+ QI + D+P + +
Sbjct: 163 NIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQHLL 222
Query: 160 YRPLP--QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 217
+P AGG LIG GAP +G PL G A G G++G
Sbjct: 223 TSAVPGVYPAGG-SLIGPG-------AGAPIVGIAPLVG-AYGGYKGDTG---------- 263
Query: 218 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 277
+ PR+ RD S K + + + P IG VI
Sbjct: 264 ------------DWPPRSMYSAP-------RDEASTK------EFSVRLVCPTGNIGGVI 298
Query: 278 GKGGTKIFEIRKISGAMIRISKSSEEEEDS 307
GKGG I +IR+ SGA I++ S+ E ++
Sbjct: 299 GKGGMIINQIRQESGATIKVDSSTTEGDEC 328
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 55/341 (16%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE--EDSNDRTITMTGTPD 319
+T ++ VP++ IG VIGKGG+ + IR +GA IRI K S+D + +TG D
Sbjct: 139 VTAKLLVPSDQIGCVIGKGGSIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITG--D 196
Query: 320 AIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQ 379
A + + L ++ L DN PS + + L +A+P
Sbjct: 197 ASVVKKALCQIASRL-------------------HDN--PS-------RSQHLLTSAVPG 228
Query: 380 LAQI---LTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYA--NIQ 434
+ L PGA + ++ L G + GG G++G + P Y+ +
Sbjct: 229 VYPAGGSLIGPGAGAPIVGIAPLVG--------AYGGYKGDTGDW---PPRSMYSAPRDE 277
Query: 435 TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMD 492
+ + +R + +G +IGK G + ++R+ESG+ I + DSST E + I + +
Sbjct: 278 ASTKEFSVRLVCPTGNIGGVIGKGGMIINQIRQESGATIKV-DSSTTEGDECLIAISTKE 336
Query: 493 SLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
FS + ++ + + RL+VP S+ G +IGKGGS I +R
Sbjct: 337 FFEETFSPTIEAAVRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMRR 396
Query: 553 TSGASVYVAS-DMLP---NSTEREVNIKGVPDAVTQAIYQI 589
+ A++ + S + LP + + V I G D A+ +
Sbjct: 397 LTKANIRIISKENLPKIASEDDEMVQISGDLDIAKDALVHV 437
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
+G +IGK G + ++R+ESG+ I + DSST E + I + + FS +
Sbjct: 294 IGGVIGKGGMIINQIRQESGATIKV-DSSTTEGDECLIAISTKEFFEETFSPTIEAAVRL 352
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS-DMLP- 121
++ + + RL+VP S+ G +IGKGGS I +R + A++ + S + LP
Sbjct: 353 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIISKENLPK 412
Query: 122 --NSTEREVNIKGVPDAVTQAIYQI 144
+ + V I G D A+ +
Sbjct: 413 IASEDDEMVQISGDLDIAKDALVHV 437
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE--EDSNDRTITMTGTPD 764
+T ++ VP++ IG VIGKGG+ + IR +GA IRI K S+D + +TG D
Sbjct: 139 VTAKLLVPSDQIGCVIGKGGSIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITG--D 196
Query: 765 AIALAQYLINMSVEL 779
A + + L ++ L
Sbjct: 197 ASVVKKALCQIASRL 211
>gi|302926012|ref|XP_003054209.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
gi|256735150|gb|EEU48496.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
Length = 472
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSM 491
+TT + +R ++ E ++IGK GE V +R+ S ++ +SD ERI+TV G +
Sbjct: 108 ETTWIH--IRAVISSPEAATVIGKGGENVSNIRKLSNARCTVSDYQKGAVERILTVSGIV 165
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
D++ +AF LI + + N+ + S+ LRL++P GSIIGKGG++I+ I+
Sbjct: 166 DAVAKAFGLIIRTL----NNEPLNESSTSSSKTYPLRLLIPHILIGSIIGKGGARIREIQ 221
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
E SGA + + LP S+ER + + GV DAV A Y +
Sbjct: 222 EASGARLNASDACLPMSSERSLVVMGVADAVHIATYYV 259
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ S ++ +SD ERI+TV G +D++ +AF LI + +
Sbjct: 122 EAATVIGKGGENVSNIRKLSNARCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 179
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + S+ LRL++P GSIIGKGG++I+ I+E SGA + + LP
Sbjct: 180 --NNEPLNESSTSSSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDACLPM 237
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
S+ER + + GV DAV A Y +
Sbjct: 238 SSERSLVVMGVADAVHIATYYV 259
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E+ I +R ++ + + ++IGKGG + IR+ S A V SD + ER + + G+ D
Sbjct: 108 ETTWIHIRAVISSPEAATVIGKGGENVSNIRKLSNARCTV-SDYQKGAVERILTVSGIVD 166
Query: 136 AVTQAIYQICLIMVDSP 152
AV +A I + + P
Sbjct: 167 AVAKAFGLIIRTLNNEP 183
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
E+ I +R ++ + + ++IGKGG + IR+ S A V SD + ER + + G+ D
Sbjct: 108 ETTWIHIRAVISSPEAATVIGKGGENVSNIRKLSNARCTV-SDYQKGAVERILTVSGIVD 166
Query: 581 AVTQAIYQICLIMVDSP 597
AV +A I + + P
Sbjct: 167 AVAKAFGLIIRTLNNEP 183
>gi|302406408|ref|XP_003001040.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
gi|261360298|gb|EEY22726.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
Length = 359
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 15/184 (8%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK G+ V LR+E+G K +S +R++T
Sbjct: 41 EYAQAQLT-----LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLT 95
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
+ G +++ RA++++ + + E + +GG +S ++L++ +Q G+IIG+ G
Sbjct: 96 ITGGCEAISRAYAIVAQALLEGAPSLG--MGGVPQSNGTHPIKLLISHNQMGTIIGRQGL 153
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
+IK I++ SG + +MLP STER V ++G PD + AI++I +VD + +
Sbjct: 154 KIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPDGIRAAIWEISKCLVDDWQR-----W 208
Query: 606 RPLP 609
+P P
Sbjct: 209 KPAP 212
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 95/164 (57%), Gaps = 10/164 (6%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LR+E+G K +S +R++T+ G +++ RA++++ + +
Sbjct: 56 KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEAISRAYAIVAQALL 115
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + +GG +S ++L++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 116 EGAPSLG--MGGVPQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEML 173
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
P STER V ++G PD + AI++I +VD + ++P P
Sbjct: 174 PQSTERIVEVQGTPDGIRAAIWEISKCLVDDWQR-----WKPAP 212
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 230 NHMPRNQNQNQNQHNRNNRDG-PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFE 286
+ +P+ + R DG P+ KT ++ Q Q+T V ++ G +IGKGG + +
Sbjct: 12 DFVPQMDQLKLDDGERLGPDGEPAPKTEEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVAD 71
Query: 287 IRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+R +G +SK + +DR +T+TG +AI+ A ++
Sbjct: 72 LRDETGVKAGVSKVVQ---GVHDRVLTITGGCEAISRAYAIV 110
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 675 NHMPRNQNQNQNQHNRNNRDG-PSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFE 731
+ +P+ + R DG P+ KT ++ Q Q+T V ++ G +IGKGG + +
Sbjct: 12 DFVPQMDQLKLDDGERLGPDGEPAPKTEEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVAD 71
Query: 732 IRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+R +G +SK + +DR +T+TG +AI+ A ++
Sbjct: 72 LRDETGVKAGVSKVVQ---GVHDRVLTITGGCEAISRAYAIV 110
>gi|327263405|ref|XP_003216510.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Anolis
carolinensis]
Length = 425
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 101
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 102 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 154
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+S++R V I G PD V + I I ++ +SP KG PY P
Sbjct: 155 QECCPHSSDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 46 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 106 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 158
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+S++R V I G PD V + I I ++ +SP KG PY P
Sbjct: 159 PHSSDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 406
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 407 QNAQYLLQNSVK 418
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 406
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 407 QNAQYLLQNSVK 418
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 349 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 407
Query: 139 QAIY 142
A Y
Sbjct: 408 NAQY 411
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 349 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 407
Query: 584 QAIY 587
A Y
Sbjct: 408 NAQY 411
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 362 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 420
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 362 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 420
>gi|169622886|ref|XP_001804851.1| hypothetical protein SNOG_14668 [Phaeosphaeria nodorum SN15]
gi|160704873|gb|EAT77860.2| hypothetical protein SNOG_14668 [Phaeosphaeria nodorum SN15]
Length = 357
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA+ Q T +R I+ KE G IIGK+G+ V LR+E+G + +S +R+++
Sbjct: 39 EYADSQLT-----LRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLS 93
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGG----NGESQ----LIQLRLIVPASQCGS 538
V GS+ + +A+ L+ K + +GG +G Q + +RL++ +Q G+
Sbjct: 94 VTGSLSGISKAYGLVAKGL--LDGAPAMGMGGVVRTDGTHQRKLTVTAIRLLISHNQMGT 151
Query: 539 IIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
IIG+ G +IK I++ SG + +MLP STER V ++G P ++ +AI++I ++D
Sbjct: 152 IIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGSPSSIEKAIWEIGKCLIDDHE 211
Query: 599 KG-ATIPYRP 607
+G T+ Y P
Sbjct: 212 RGYGTVLYNP 221
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 97/170 (57%), Gaps = 13/170 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G + +S +R+++V GS+ + +A+ L+ K +
Sbjct: 54 KEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGISKAYGLVAKGL- 112
Query: 62 EFHKNQNKHLGG----NGESQ----LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
+GG +G Q + +RL++ +Q G+IIG+ G +IK I++ SG +
Sbjct: 113 -LDGAPAMGMGGVVRTDGTHQRKLTVTAIRLLISHNQMGTIIGRQGLKIKQIQDASGVRM 171
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRP 162
+MLP STER V ++G P ++ +AI++I ++D +G T+ Y P
Sbjct: 172 VAQKEMLPQSTERIVEVQGSPSSIEKAIWEIGKCLIDDHERGYGTVLYNP 221
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T+ +++P++++G +IG+GG+KI EIRK SGA I I+K+ +D+ +R T+TG+ A
Sbjct: 278 TQNISIPSDMVGCIIGRGGSKISEIRKTSGARISIAKAP--HDDTGERMFTITGSATANE 335
Query: 323 LAQYLI--NMSVELLR 336
A YL+ N+ E +R
Sbjct: 336 KALYLLYENLEAEKMR 351
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T+ +++P++++G +IG+GG+KI EIRK SGA I I+K+ +D+ +R T+TG+ A
Sbjct: 278 TQNISIPSDMVGCIIGRGGSKISEIRKTSGARISIAKAP--HDDTGERMFTITGSATANE 335
Query: 768 LAQYLI--NMSVELLR 781
A YL+ N+ E +R
Sbjct: 336 KALYLLYENLEAEKMR 351
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+P+ G IIG+GGS+I IR+TSGA + +A ++ ER I G A +A+Y
Sbjct: 283 IPSDMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTITGSATANEKALY 339
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+P+ G IIG+GGS+I IR+TSGA + +A ++ ER I G A +A+Y
Sbjct: 283 IPSDMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTITGSATANEKALY 339
Score = 39.7 bits (91), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNIE 61
VG IIG+ G + ++R+ SG++I I+ + T ER+ T+ GS + +A L+ +N+E
Sbjct: 288 VGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTITGSATANEKALYLLYENLE 346
Score = 39.7 bits (91), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNIE 506
VG IIG+ G + ++R+ SG++I I+ + T ER+ T+ GS + +A L+ +N+E
Sbjct: 288 VGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTITGSATANEKALYLLYENLE 346
>gi|348528027|ref|XP_003451520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 429
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI++V S+D++ I
Sbjct: 46 LRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVNASIDTIGEILLKI 105
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 106 IPTLEEY-----QHYSGIDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 158
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V + G P+ V + I I ++ ++P KG PY P
Sbjct: 159 QECCPHSTDRVVLVGGKPERVVECIKVILELVSEAPIKGRAQPYDP 204
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI++V S+D++ I +
Sbjct: 50 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVNASIDTIGEILLKIIPTL 109
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 110 EEY-----QHYSGIDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 162
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V + G P+ V + I I ++ ++P KG PY P
Sbjct: 163 PHSTDRVVLVGGKPERVVECIKVILELVSEAPIKGRAQPYDP 204
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 410
Query: 322 ALAQYLINMSV 332
AQYL+ SV
Sbjct: 411 QNAQYLLQNSV 421
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 410
Query: 767 ALAQYLINMSV 777
AQYL+ SV
Sbjct: 411 QNAQYLLQNSV 421
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 353 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 411
Query: 139 QAIY 142
A Y
Sbjct: 412 NAQY 415
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 353 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 411
Query: 584 QAIY 587
A Y
Sbjct: 412 NAQY 415
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ ++ ++
Sbjct: 366 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVRQY 424
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ ++ ++
Sbjct: 366 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVRQY 424
>gi|387018122|gb|AFJ51179.1| Heterogeneous nuclear ribonucleoprotein K-like [Crotalus
adamanteus]
Length = 426
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 101
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 102 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 154
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+S++R V I G PD V + I I ++ +SP KG PY P
Sbjct: 155 QECCPHSSDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 46 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 106 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 158
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+S++R V I G PD V + I I ++ +SP KG PY P
Sbjct: 159 PHSSDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 406
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 407 QNAQYLLQNSVK 418
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 406
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 407 QNAQYLLQNSVK 418
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 349 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 407
Query: 139 QAIY 142
A Y
Sbjct: 408 NAQY 411
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 349 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 407
Query: 584 QAIY 587
A Y
Sbjct: 408 NAQY 411
Score = 43.1 bits (100), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 362 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 420
Score = 43.1 bits (100), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 362 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 420
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 153/348 (43%), Gaps = 62/348 (17%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
+R ++ G IIGK G T+ + +SG++I +S S T +RI+ V G +
Sbjct: 41 HLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVM 100
Query: 496 RAFSLITKNI----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+A LI + + EEF++ + + ++RL+VP + CG IIGKGG+ IK+
Sbjct: 101 KAMELILEKLLAEGEEFNEAEARP----------KVRLVVPNNSCGGIIGKGGATIKSFI 150
Query: 552 ETSGASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
E S A + ++ + +R V + G D AI I + L
Sbjct: 151 EESHAGIKISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLIL---------------KKLS 195
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
++ P + + F P AGL G G M
Sbjct: 196 EDVHYPANLSSPF---------------PYAGLTFPSYPGVPVGYM---------IPQVP 231
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
N+ P N + Q+N+ + S +N+ Q +T + + +E IGAV+G+ G I
Sbjct: 232 YNNAVNYGPNNGYGGRYQNNKPSTPMRSPASNEAQESLT--IGIADEHIGAVVGRAGRNI 289
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
EI + SGA I+IS + ++DR +T+TGT +AI A+ +I V
Sbjct: 290 TEIIQASGARIKISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 149/337 (44%), Gaps = 62/337 (18%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI- 60
G IIGK G T+ + +SG++I +S S T +RI+ V G + +A LI + +
Sbjct: 52 GCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKAMELILEKLL 111
Query: 61 ---EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA- 116
EEF++ + + ++RL+VP + CG IIGKGG+ IK+ E S A + ++
Sbjct: 112 AEGEEFNEAEARP----------KVRLVVPNNSCGGIIGKGGATIKSFIEESHAGIKISP 161
Query: 117 -SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
+ +R V + G D AI I + L ++ P + +
Sbjct: 162 QDNNYVGLHDRLVTVTGTFDNQMNAIDLIL---------------KKLSEDVHYPANLSS 206
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
F P AGL G G M N+ P N
Sbjct: 207 PF---------------PYAGLTFPSYPGVPVGYM---------IPQVPYNNAVNYGPNN 242
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+ Q+N+ + S +N+ Q +T + + +E IGAV+G+ G I EI + SGA I
Sbjct: 243 GYGGRYQNNKPSTPMRSPASNEAQESLT--IGIADEHIGAVVGRAGRNITEIIQASGARI 300
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+IS + ++DR +T+TGT +AI A+ +I V
Sbjct: 301 KISDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 58/267 (21%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
++ N+ + + + VPN G +IGKGG I + S A I+IS +DR +
Sbjct: 115 EEFNEAEARPKVRLVVPNNSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLV 174
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 371
T+TGT D A ++L+ L+ +D NL S P AGL +
Sbjct: 175 TVTGTFDNQMNA-------IDLILKKLS---------EDVHYPANLSSPFPYAGLTFPSY 218
Query: 372 ---PLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG----- 423
P+ +PQ+ A+N G + G+GG
Sbjct: 219 PGVPVGYMIPQVPY----NNAVNY-----------------------GPNNGYGGRYQNN 251
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----S 478
P P + + Q + + + +G+++G++G + ++ + SG++I ISD S
Sbjct: 252 KPSTP-MRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIS 310
Query: 479 STPERIVTVIGSMDSLFRAFSLITKNI 505
T +R VT+ G+ +++ A S+I + +
Sbjct: 311 GTSDRKVTITGTSEAIRTAESMIMQRV 337
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S++ + ++ I V N G +IGKGG+ I + + SGA I++S+S E +NDR
Sbjct: 30 SEEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 89
Query: 312 ITMTGTPDAIALAQYLI 328
I ++G + A LI
Sbjct: 90 IMVSGLFGEVMKAMELI 106
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S++ + ++ I V N G +IGKGG+ I + + SGA I++S+S E +NDR
Sbjct: 30 SEEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRI 89
Query: 757 ITMTGTPDAIALAQYLI 773
I ++G + A LI
Sbjct: 90 IMVSGLFGEVMKAMELI 106
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 757
++ N+ + + + VPN G +IGKGG I + S A I+IS +DR +
Sbjct: 115 EEFNEAEARPKVRLVVPNNSCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLV 174
Query: 758 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN- 816
T+TGT D A ++L+ L+ +D NL S P AGL +
Sbjct: 175 TVTGTFDNQMNA-------IDLILKKLS---------EDVHYPANLSSPFPYAGLTFPSY 218
Query: 817 ---PLAAALPQL 825
P+ +PQ+
Sbjct: 219 PGVPVGYMIPQV 230
>gi|400603119|gb|EJP70717.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 464
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V +R+ S +K +SD ERI+TV G +D++ +AF
Sbjct: 108 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIVDAVAKAF 167
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ S+ LRL++P GSIIGKGG++I+ I+E SGA +
Sbjct: 168 GLIIRTL----NNEALTETSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARL 223
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ LP S+ER + + GV DAV A Y +
Sbjct: 224 NASDSCLPMSSERSLVVMGVADAVHIATYYV 254
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V +R+ S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 117 EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 174
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ S+ LRL++P GSIIGKGG++I+ I+E SGA + + LP
Sbjct: 175 --NNEALTETSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPM 232
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
S+ER + + GV DAV A Y +
Sbjct: 233 SSERSLVVMGVADAVHIATYYV 254
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 390 MTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKI---NEPQDNSNERLVTVTGTEECN 446
Query: 322 ALAQYLI 328
+A YL+
Sbjct: 447 RMALYLL 453
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 390 MTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKI---NEPQDNSNERLVTVTGTEECN 446
Query: 767 ALAQYLI 773
+A YL+
Sbjct: 447 RMALYLL 453
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 194 LLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 251
Query: 326 YLINMSVELLRANLNGEGGG 345
Y + + L LN GG
Sbjct: 252 YYVGST---LLEQLNERFGG 268
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 194 LLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 251
Query: 771 YLINMSVELLRANLNGEGGG 790
Y + + L LN GG
Sbjct: 252 YYVGST---LLEQLNERFGG 268
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E+ I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 101 HDETSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTV-SDYQKGAVERILTVSGI 159
Query: 134 PDAVTQAI 141
DAV +A
Sbjct: 160 VDAVAKAF 167
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
QN H G G Q+ +P G+IIGKGG +I IR+ SG SV ++ NS ER
Sbjct: 379 QNMHAGMPGGPMTQQI--YIPNDMVGAIIGKGGQKINEIRQLSG-SVIKINEPQDNSNER 435
Query: 127 EVNIKGVPDAVTQAIY 142
V + G + A+Y
Sbjct: 436 LVTVTGTEECNRMALY 451
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 571
QN H G G Q+ +P G+IIGKGG +I IR+ SG SV ++ NS ER
Sbjct: 379 QNMHAGMPGGPMTQQI--YIPNDMVGAIIGKGGQKINEIRQLSG-SVIKINEPQDNSNER 435
Query: 572 EVNIKGVPDAVTQAIY 587
V + G + A+Y
Sbjct: 436 LVTVTGTEECNRMALY 451
>gi|452837822|gb|EME39763.1| hypothetical protein DOTSEDRAFT_74610 [Dothistroma septosporum
NZE10]
Length = 490
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 6/172 (3%)
Query: 426 QGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPER 483
Q P + Q +R I+ E ++IGK GE V ++R +G+K +S+ + ER
Sbjct: 112 QAPMPYHQQDESSWLHVRAIISSAEAATVIGKGGENVTQIRRMAGAKCTVSEYTRGAVER 171
Query: 484 IVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
I+TV G +D++ +AF LI + + + +Q +S+ LRL++P GSIIGK
Sbjct: 172 ILTVSGLVDAVAKAFGLIIRTLNQEPLDQP----STPQSKTYPLRLLIPHILIGSIIGKQ 227
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
G +I+ I+E SGA + + LP STER + + GV DAV A Y + +V+
Sbjct: 228 GVRIREIQEASGARLNASESCLPLSTERSLVVLGVADAVHIATYYVGSTLVE 279
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R +G+K +S+ + ERI+TV G +D++ +AF LI + + +
Sbjct: 136 EAATVIGKGGENVTQIRRMAGAKCTVSEYTRGAVERILTVSGLVDAVAKAFGLIIRTLNQ 195
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+Q +S+ LRL++P GSIIGK G +I+ I+E SGA + + LP
Sbjct: 196 EPLDQP----STPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPL 251
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
STER + + GV DAV A Y + +V+
Sbjct: 252 STERSLVVLGVADAVHIATYYVGSTLVE 279
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E ++++N+R +T+TGT +
Sbjct: 410 ITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNNNERLVTITGTQECN 466
Query: 322 ALAQYLI 328
+A Y++
Sbjct: 467 QMALYML 473
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E ++++N+R +T+TGT +
Sbjct: 410 ITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNNNERLVTITGTQECN 466
Query: 767 ALAQYLI 773
+A Y++
Sbjct: 467 QMALYML 473
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 124/297 (41%), Gaps = 35/297 (11%)
Query: 247 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
N++ Q + Q + +P+ LIG++IGK G +I EI++ SGA + S+S
Sbjct: 194 NQEPLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPL-- 251
Query: 307 SNDRTITMTGTPDAIALAQYLINMS-VELLRANLNGEGGG-------ESNMDDFSSDNNL 358
S +R++ + G DA+ +A Y + + VE L G +
Sbjct: 252 STERSLVVLGVADAVHIATYYVGSTLVEQLTERFGGPAASNYAGRHGGPQGVVPGGMQVV 311
Query: 359 PSSAPLAGLNASNPLAAALPQLAQILTKP----GALNALTSLSALGGLSDLLGGGSSGGG 414
P AG +P Q AQ P G + + L +G G G
Sbjct: 312 PYVPQHAGGQMGHPDYNRNKQHAQPQRTPAQPYGGQQYMQGQTPLPPQQAPMG---YGAG 368
Query: 415 SGNSGGFGGVPQGPN---YANIQTTG--VQRRMRHIMQGKE-----------VGSIIGKS 458
S + G PQ P +A Q Q+ M+ ++ G+ VG+IIGK
Sbjct: 369 SPRAPYVGAGPQQPQPYGHAAPQAHAGPPQQPMQGMVPGQPITQQIFIPNDMVGAIIGKG 428
Query: 459 GETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQN 513
G + ++R+ SGS I I++ + ER+VT+ G+ + A ++ + E KN N
Sbjct: 429 GAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQMALYMLYSRLGESSKNSN 485
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 692 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
N++ Q + Q + +P+ LIG++IGK G +I EI++ SGA + S+S
Sbjct: 194 NQEPLDQPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPL-- 251
Query: 752 SNDRTITMTGTPDAIALAQYLINMS-VELLRANLNG 786
S +R++ + G DA+ +A Y + + VE L G
Sbjct: 252 STERSLVVLGVADAVHIATYYVGSTLVEQLTERFGG 287
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES + +R I+ +++ ++IGKGG + IR +GA V S+ + ER + + G+ D
Sbjct: 122 ESSWLHVRAIISSAEAATVIGKGGENVTQIRRMAGAKCTV-SEYTRGAVERILTVSGLVD 180
Query: 136 AVTQAIYQICLIM----VDSP--PKGATIPYR 161
AV +A I + +D P P+ T P R
Sbjct: 181 AVAKAFGLIIRTLNQEPLDQPSTPQSKTYPLR 212
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES + +R I+ +++ ++IGKGG + IR +GA V S+ + ER + + G+ D
Sbjct: 122 ESSWLHVRAIISSAEAATVIGKGGENVTQIRRMAGAKCTV-SEYTRGAVERILTVSGLVD 180
Query: 581 AVTQAIYQICLIM----VDSP--PKGATIPYR 606
AV +A I + +D P P+ T P R
Sbjct: 181 AVAKAFGLIIRTLNQEPLDQPSTPQSKTYPLR 212
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
Q I ++ +P G+IIGKGG++I IR+ SG+ + + ++ N+ ER V I G
Sbjct: 408 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPQDNNNERLVTITG----- 461
Query: 138 TQAIYQICLIMVDS 151
TQ Q+ L M+ S
Sbjct: 462 TQECNQMALYMLYS 475
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
Q I ++ +P G+IIGKGG++I IR+ SG+ + + ++ N+ ER V I G
Sbjct: 408 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPQDNNNERLVTITG----- 461
Query: 583 TQAIYQICLIMVDS 596
TQ Q+ L M+ S
Sbjct: 462 TQECNQMALYMLYS 475
>gi|358255903|dbj|GAA57520.1| heterogeneous nuclear ribonucleoprotein K, partial [Clonorchis
sinensis]
Length = 1085
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 157/369 (42%), Gaps = 72/369 (19%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G IIGK GE ++++REE K+ I DS+ PER++ + G + S+ F +N+E N
Sbjct: 3 GVIIGKGGENIQRIREEYSVKVMIPDSNGPERVLVLDGDLGSVLEIF---VENLERMQNN 59
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML-PNSTE 125
+++ + LRL+V SQ G IIG+GG +IK +RE SG ML P ST+
Sbjct: 60 RDEG---------VDLRLLVHQSQAGCIIGRGGYKIKELREQSGLQTLKVYQMLCPGSTD 110
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY------RPLPQNAGGPGLIGNQFGM 179
R + + G D V + I ++ +PPKG+ Y + + GG G+ G
Sbjct: 111 RVIQLVGDLDKVVDCLQAIAELLEGAPPKGSRQNYDARDADESIAADYGGWGV-----GN 165
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNS---------------GGGMGGGLNAAALAALAS 224
QN+ +G NN L+ G N+ G GG AA ALAS
Sbjct: 166 QNAALGLVQRRNN----LSTAAYGQNNVLAAGLFGGGGTGVTVAGRTGGQAAAVTQALAS 221
Query: 225 SQLKTNHMPRNQNQN-------QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNEL-IGAV 276
S +P Q N +PN + + +
Sbjct: 222 S------LPHASAAAMLAATGGQTAGGPNAGPAGDAAAAAAMMAAGLMRGLPNRVAMNFL 275
Query: 277 IGKGGTKIFEIRKISGAM-----IRISKSSEE----------EEDSNDRTITMTGTPDAI 321
T++ K+ GA+ +RI++ +E E DR IT+TGTP+ I
Sbjct: 276 TPTTTTQVSVSNKMIGAIMGRAGVRINQVRQESNADIKISRQEPGVEDRIITITGTPEQI 335
Query: 322 ALAQYLINM 330
AQ+L+ M
Sbjct: 336 QNAQFLLQM 344
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 157/369 (42%), Gaps = 72/369 (19%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G IIGK GE ++++REE K+ I DS+ PER++ + G + S+ F +N+E N
Sbjct: 3 GVIIGKGGENIQRIREEYSVKVMIPDSNGPERVLVLDGDLGSVLEIF---VENLERMQNN 59
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML-PNSTE 570
+++ + LRL+V SQ G IIG+GG +IK +RE SG ML P ST+
Sbjct: 60 RDEG---------VDLRLLVHQSQAGCIIGRGGYKIKELREQSGLQTLKVYQMLCPGSTD 110
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY------RPLPQNAGGPGLIGNQFGM 624
R + + G D V + I ++ +PPKG+ Y + + GG G+ G
Sbjct: 111 RVIQLVGDLDKVVDCLQAIAELLEGAPPKGSRQNYDARDADESIAADYGGWGV-----GN 165
Query: 625 QNSLMGAPDMGNNPLAGLAALGLGGNS---------------GGGMGGGLNAAALAALAS 669
QN+ +G NN L+ G N+ G GG AA ALAS
Sbjct: 166 QNAALGLVQRRNN----LSTAAYGQNNVLAAGLFGGGGTGVTVAGRTGGQAAAVTQALAS 221
Query: 670 SQLKTNHMPRNQNQN-------QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNEL-IGAV 721
S +P Q N +PN + + +
Sbjct: 222 S------LPHASAAAMLAATGGQTAGGPNAGPAGDAAAAAAMMAAGLMRGLPNRVAMNFL 275
Query: 722 IGKGGTKIFEIRKISGAM-----IRISKSSEE----------EEDSNDRTITMTGTPDAI 766
T++ K+ GA+ +RI++ +E E DR IT+TGTP+ I
Sbjct: 276 TPTTTTQVSVSNKMIGAIMGRAGVRINQVRQESNADIKISRQEPGVEDRIITITGTPEQI 335
Query: 767 ALAQYLINM 775
AQ+L+ M
Sbjct: 336 QNAQFLLQM 344
>gi|408389667|gb|EKJ69103.1| hypothetical protein FPSE_10721 [Fusarium pseudograminearum CS3096]
Length = 474
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 8/161 (4%)
Query: 431 ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVI 488
A+ +T+ + +R ++ E ++IGK GE V +R+ S +K +SD ERI+TV
Sbjct: 106 AHDETSWIH--VRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAVERILTVS 163
Query: 489 GSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
G +D++ +AF LI + + N+ + S+ LRL++P GSIIGKGG++I+
Sbjct: 164 GIVDAVAKAFGLIIRTL----NNEPLNESSTASSKTYPLRLLIPHILIGSIIGKGGARIR 219
Query: 549 TIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
I++ SGA + + LP S+ER + + GV DAV A Y +
Sbjct: 220 EIQDASGARLNASDSCLPMSSERSLVVMGVADAVHIATYYV 260
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 123 EAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 180
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + S+ LRL++P GSIIGKGG++I+ I++ SGA + + LP
Sbjct: 181 --NNEPLNESSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQDASGARLNASDSCLPM 238
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
S+ER + + GV DAV A Y +
Sbjct: 239 SSERSLVVMGVADAVHIATYYV 260
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
+ E+ I +R ++ + + ++IGKGG + IR+ S A V SD + ER + +
Sbjct: 105 AAHDETSWIHVRAVISSPEAATVIGKGGENVSNIRKLSNAKCTV-SDYQKGAVERILTVS 163
Query: 132 GVPDAVTQAIYQICLIMVDSP 152
G+ DAV +A I + + P
Sbjct: 164 GIVDAVAKAFGLIIRTLNNEP 184
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+ E+ I +R ++ + + ++IGKGG + IR+ S A V SD + ER + +
Sbjct: 105 AAHDETSWIHVRAVISSPEAATVIGKGGENVSNIRKLSNAKCTV-SDYQKGAVERILTVS 163
Query: 577 GVPDAVTQAIYQICLIMVDSP 597
G+ DAV +A I + + P
Sbjct: 164 GIVDAVAKAFGLIIRTLNNEP 184
>gi|427795265|gb|JAA63084.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 228
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 59/70 (84%), Gaps = 3/70 (4%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
EMT+PN+LIG +IGKGG+KI EIR++SGA I+IS S EE S DRT+T++GTP+AI LA
Sbjct: 54 EMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNS---EEGSKDRTVTISGTPEAINLA 110
Query: 325 QYLINMSVEL 334
QYLIN S+EL
Sbjct: 111 QYLINTSMEL 120
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 59/70 (84%), Gaps = 3/70 (4%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
EMT+PN+LIG +IGKGG+KI EIR++SGA I+IS S EE S DRT+T++GTP+AI LA
Sbjct: 54 EMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNS---EEGSKDRTVTISGTPEAINLA 110
Query: 770 QYLINMSVEL 779
QYLIN S+EL
Sbjct: 111 QYLINTSMEL 120
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 84 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQ 143
+ +P G IIGKGGS+I IR+ SGA++ + S+ S +R V I G P+A+ A Y
Sbjct: 55 MTIPNDLIGCIIGKGGSKINEIRQLSGATIKI-SNSEEGSKDRTVTISGTPEAINLAQYL 113
Query: 144 I 144
I
Sbjct: 114 I 114
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 529 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQ 588
+ +P G IIGKGGS+I IR+ SGA++ + S+ S +R V I G P+A+ A Y
Sbjct: 55 MTIPNDLIGCIIGKGGSKINEIRQLSGATIKI-SNSEEGSKDRTVTISGTPEAINLAQYL 113
Query: 589 I 589
I
Sbjct: 114 I 114
>gi|154794977|gb|ABS86521.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 250
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 36/247 (14%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
+R++V + GSIIG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI
Sbjct: 28 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 87
Query: 142 YQI--CLIMVDSPPKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLA 198
++I CL M D T+ Y+P A GP G+ G + G
Sbjct: 88 HEIGKCL-MEDWERAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGR 143
Query: 199 ALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 258
G G SGG M G + P +N N H+ N +G + N
Sbjct: 144 RAGSGVPSGGHMSGDV------------------PGRRNHNGTYHSNGNENGHRSRENSL 185
Query: 259 QNQ---------ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 309
+ T+ +++P +++G +IGKGG KI EIR++SG+ I I+K+ +D+ +
Sbjct: 186 ASAPAPVADRLLRTQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAKTP--HDDTGE 243
Query: 310 RTITMTG 316
R T+TG
Sbjct: 244 RMFTITG 250
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 36/247 (14%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 586
+R++V + GSIIG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI
Sbjct: 28 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 87
Query: 587 YQI--CLIMVDSPPKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLA 643
++I CL M D T+ Y+P A GP G+ G + G
Sbjct: 88 HEIGKCL-MEDWERAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGR 143
Query: 644 ALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 703
G G SGG M G + P +N N H+ N +G + N
Sbjct: 144 RAGSGVPSGGHMSGDV------------------PGRRNHNGTYHSNGNENGHRSRENSL 185
Query: 704 QNQ---------ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 754
+ T+ +++P +++G +IGKGG KI EIR++SG+ I I+K+ +D+ +
Sbjct: 186 ASAPAPVADRLLRTQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAKTP--HDDTGE 243
Query: 755 RTITMTG 761
R T+TG
Sbjct: 244 RMFTITG 250
>gi|46108346|ref|XP_381231.1| hypothetical protein FG01055.1 [Gibberella zeae PH-1]
Length = 448
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 93/161 (57%), Gaps = 8/161 (4%)
Query: 431 ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVI 488
A+ +T+ + +R ++ E ++IGK GE V +R+ S +K +SD ERI+TV
Sbjct: 106 AHDETSWIH--VRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAVERILTVS 163
Query: 489 GSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
G +D++ +AF LI + + N+ + S+ LRL++P GSIIGKGG++I+
Sbjct: 164 GIVDAVAKAFGLIIRTL----NNEPLNEPSTASSKTYPLRLLIPHILIGSIIGKGGARIR 219
Query: 549 TIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
I++ SGA + + LP S+ER + + GV DAV A Y +
Sbjct: 220 EIQDASGARLNASDSCLPMSSERSLVVMGVADAVHIATYYV 260
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V +R+ S +K +SD ERI+TV G +D++ +AF LI + +
Sbjct: 123 EAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAVERILTVSGIVDAVAKAFGLIIRTL-- 180
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ + S+ LRL++P GSIIGKGG++I+ I++ SGA + + LP
Sbjct: 181 --NNEPLNEPSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQDASGARLNASDSCLPM 238
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
S+ER + + GV DAV A Y +
Sbjct: 239 SSERSLVVMGVADAVHIATYYV 260
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
+ E+ I +R ++ + + ++IGKGG + IR+ S A V SD + ER + +
Sbjct: 105 AAHDETSWIHVRAVISSPEAATVIGKGGENVSNIRKLSNAKCTV-SDYQKGAVERILTVS 163
Query: 132 GVPDAVTQAIYQICLIMVDSP 152
G+ DAV +A I + + P
Sbjct: 164 GIVDAVAKAFGLIIRTLNNEP 184
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+ E+ I +R ++ + + ++IGKGG + IR+ S A V SD + ER + +
Sbjct: 105 AAHDETSWIHVRAVISSPEAATVIGKGGENVSNIRKLSNAKCTV-SDYQKGAVERILTVS 163
Query: 577 GVPDAVTQAIYQICLIMVDSP 597
G+ DAV +A I + + P
Sbjct: 164 GIVDAVAKAFGLIIRTLNNEP 184
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 154/344 (44%), Gaps = 71/344 (20%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
+R ++ GS+IGK G T+ + +SG++I +S + T +R+ + GS+ +
Sbjct: 17 LRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSLADVLT 76
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF LI I + K+ N+ +++ IQ++L+VP + CG+IIGKGGS IK E S A
Sbjct: 77 AFQLI---ISKIIKDDNQD-----DTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQA 128
Query: 557 SVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGG 614
S+ ++S +LP +R V I G D + +A+ I + + T PL G
Sbjct: 129 SIKLSSQDQLLPGVIDRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTS-TPLVYPGTG 187
Query: 615 PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
P F ++ +P GL G G + A + AL SS T
Sbjct: 188 P----TPFIVRCVYHASP-------------GLQNLRRNGPGPPMPVAYVGALTSS--VT 228
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+P ++H IG ++G+ G + E+++
Sbjct: 229 IGIP-------DEH-----------------------------IGFILGRAGKTLQELQQ 252
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
SGA I++S + + R +TM G+ +AI AQ+L+ V+
Sbjct: 253 SSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAAQFLLTQKVQ 296
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 150/334 (44%), Gaps = 71/334 (21%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GS+IGK G T+ + +SG++I +S + T +R+ + GS+ + AF LI I
Sbjct: 27 GSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSLADVLTAFQLI---IS 83
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DM 119
+ K+ N+ +++ IQ++L+VP + CG+IIGKGGS IK E S AS+ ++S +
Sbjct: 84 KIIKDDNQD-----DTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQASIKLSSQDQL 138
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
LP +R V I G D + +A+ I + + T PL GP F +
Sbjct: 139 LPGVIDRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTS-TPLVYPGTGP----TPFIV 193
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+ +P GL G G + A + AL SS T +P
Sbjct: 194 RCVYHASP-------------GLQNLRRNGPGPPMPVAYVGALTSS--VTIGIP------ 232
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
++H IG ++G+ G + E+++ SGA I++S
Sbjct: 233 -DEH-----------------------------IGFILGRAGKTLQELQQSSGAKIKVSD 262
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+ + R +TM G+ +AI AQ+L+ V+
Sbjct: 263 RGDFVTGTEYRKVTMIGSGEAIQAAQFLLTQKVQ 296
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 55/251 (21%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
I ++ VP + GA+IGKGG+ I + + S A I++S + DR +T+ G D I
Sbjct: 97 IQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQASIKLSSQDQLLPGVIDRIVTIGGNVDQI 156
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
A V L+ L E ++ + P P G
Sbjct: 157 IKA-------VTLILTKLTEESS-------YTETTSTPLVYPGTG--------------- 187
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRR 441
P A GL +L G G P Y T+ V
Sbjct: 188 -----PTPFIVRCVYHASPGLQNLRRNGP------------GPPMPVAYVGALTSSVTIG 230
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPERIVTVIGSMDSLFR 496
+ + +G I+G++G+T+++L++ SG+KI +SD + T R VT+IGS +++
Sbjct: 231 IPD----EHIGFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQA 286
Query: 497 AFSLITKNIEE 507
A L+T+ +++
Sbjct: 287 AQFLLTQKVQQ 297
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPERIVTVIGSMDSLFRAFSLITK 58
+ +G I+G++G+T+++L++ SG+KI +SD + T R VT+IGS +++ A L+T+
Sbjct: 234 EHIGFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAAQFLLTQ 293
Query: 59 NIEE 62
+++
Sbjct: 294 KVQQ 297
>gi|154794979|gb|ABS86522.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
gi|154794985|gb|ABS86525.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 234
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 36/247 (14%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
+R++V + GSIIG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI
Sbjct: 12 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 71
Query: 142 YQI--CLIMVDSPPKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLA 198
++I CL M D T+ Y+P A GP G+ G + G
Sbjct: 72 HEIGKCL-MEDWERAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGR 127
Query: 199 ALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 258
G G SGG M G + P +N N H+ N +G + N
Sbjct: 128 RAGSGVPSGGHMSGDV------------------PGRRNHNGTYHSNGNENGHRSRENSL 169
Query: 259 QNQ---------ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 309
+ T+ +++P +++G +IGKGG KI EIR++SG+ I I+K+ +D+ +
Sbjct: 170 ASAPAPVADRLLRTQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAKTP--HDDTGE 227
Query: 310 RTITMTG 316
R T+TG
Sbjct: 228 RMFTITG 234
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 36/247 (14%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 586
+R++V + GSIIG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI
Sbjct: 12 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 71
Query: 587 YQI--CLIMVDSPPKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLA 643
++I CL M D T+ Y+P A GP G+ G + G
Sbjct: 72 HEIGKCL-MEDWERAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGR 127
Query: 644 ALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 703
G G SGG M G + P +N N H+ N +G + N
Sbjct: 128 RAGSGVPSGGHMSGDV------------------PGRRNHNGTYHSNGNENGHRSRENSL 169
Query: 704 QNQ---------ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 754
+ T+ +++P +++G +IGKGG KI EIR++SG+ I I+K+ +D+ +
Sbjct: 170 ASAPAPVADRLLRTQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAKTP--HDDTGE 227
Query: 755 RTITMTG 761
R T+TG
Sbjct: 228 RMFTITG 234
>gi|154794987|gb|ABS86526.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 226
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 36/247 (14%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
+R++V + GSIIG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI
Sbjct: 4 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 63
Query: 142 YQI--CLIMVDSPPKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLA 198
++I CL M D T+ Y+P A GP G+ G + G
Sbjct: 64 HEIGKCL-MEDWERAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGR 119
Query: 199 ALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 258
G G SGG M G + P +N N H+ N +G + N
Sbjct: 120 RAGSGVPSGGHMSGDV------------------PGRRNHNGTYHSNGNENGHRSRENSL 161
Query: 259 QNQ---------ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 309
+ T+ +++P +++G +IGKGG KI EIR++SG+ I I+K+ +D+ +
Sbjct: 162 ASAPAPVADRLLRTQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAKTP--HDDTGE 219
Query: 310 RTITMTG 316
R T+TG
Sbjct: 220 RMFTITG 226
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 36/247 (14%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 586
+R++V + GSIIG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI
Sbjct: 4 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 63
Query: 587 YQI--CLIMVDSPPKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLA 643
++I CL M D T+ Y+P A GP G+ G + G
Sbjct: 64 HEIGKCL-MEDWERAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGR 119
Query: 644 ALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 703
G G SGG M G + P +N N H+ N +G + N
Sbjct: 120 RAGSGVPSGGHMSGDV------------------PGRRNHNGTYHSNGNENGHRSRENSL 161
Query: 704 QNQ---------ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 754
+ T+ +++P +++G +IGKGG KI EIR++SG+ I I+K+ +D+ +
Sbjct: 162 ASAPAPVADRLLRTQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAKTP--HDDTGE 219
Query: 755 RTITMTG 761
R T+TG
Sbjct: 220 RMFTITG 226
>gi|345564609|gb|EGX47569.1| hypothetical protein AOL_s00083g77 [Arthrobotrys oligospora ATCC
24927]
Length = 459
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E ++IGK GE V ++R S +K +S+ + ERI+TV G +D++ +AF
Sbjct: 104 HVRALITSAEAATVIGKGGENVTQIRRLSEAKCTVSEYTRGAVERILTVSGGVDAVAKAF 163
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + I ++ S+ LRL++P GSIIGKGG +I+ I++ SGA +
Sbjct: 164 GLIIRTI----NSEPLSSASTQNSKTFPLRLLIPHILIGSIIGKGGMRIREIQDASGARL 219
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
+ LP STER + + GV DAV A Y + +V+
Sbjct: 220 NASDSCLPLSTERSLMVVGVADAVHIATYYVATTLVE 256
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E ++IGK GE V ++R S +K +S+ + ERI+TV G +D++ +AF LI + I
Sbjct: 113 EAATVIGKGGENVTQIRRLSEAKCTVSEYTRGAVERILTVSGGVDAVAKAFGLIIRTI-- 170
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ S+ LRL++P GSIIGKGG +I+ I++ SGA + + LP
Sbjct: 171 --NSEPLSSASTQNSKTFPLRLLIPHILIGSIIGKGGMRIREIQDASGARLNASDSCLPL 228
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
STER + + GV DAV A Y + +V+
Sbjct: 229 STERSLMVVGVADAVHIATYYVATTLVE 256
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 385 LTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTQECN 441
Query: 322 ALAQYLINMSVE 333
+A Y++ +E
Sbjct: 442 QMALYMLYSRLE 453
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 56/72 (77%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 385 LTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPQDNSNERLVTITGTQECN 441
Query: 767 ALAQYLINMSVE 778
+A Y++ +E
Sbjct: 442 QMALYMLYSRLE 453
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 117/295 (39%), Gaps = 48/295 (16%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S + Q + +P+ LIG++IGKGG +I EI+ SGA R++ S S +R+
Sbjct: 176 SSASTQNSKTFPLRLLIPHILIGSIIGKGGMRIREIQDASGA--RLNASDSCLPLSTERS 233
Query: 312 ITMTGTPDAIALAQYLINMS-VELLRANLNGEG--------------------------- 343
+ + G DA+ +A Y + + VE L G
Sbjct: 234 LMVVGVADAVHIATYYVATTLVEQLTERFGGPAASAYASRSGGPAGAVPGGMQVVPYTPQ 293
Query: 344 ---GGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALG 400
G + D++ NN P +NP + +P A SA
Sbjct: 294 PAFGNYGHPDNYRRHNNQAQRTP------ANPYGIPYLHGQPPVQQPAAPIHYADPSAQP 347
Query: 401 GLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTT--GVQRRMRHIMQGKEVGSIIGKS 458
S G G + G G P + N+ G + + VG+IIGK
Sbjct: 348 AYS---GAGPHQPTVPHHGAHTG-PAAQGHGNMAAMIPGAPLTQQIYIPNDMVGAIIGKG 403
Query: 459 GETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE-EFHK 510
G + ++R+ SGS I I++ ++ ER+VT+ G+ + A ++ +E E H+
Sbjct: 404 GAKINEIRQLSGSVIKINEPQDNSNERLVTITGTQECNQMALYMLYSRLESEKHR 458
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S + Q + +P+ LIG++IGKGG +I EI+ SGA R++ S S +R+
Sbjct: 176 SSASTQNSKTFPLRLLIPHILIGSIIGKGGMRIREIQDASGA--RLNASDSCLPLSTERS 233
Query: 757 ITMTGTPDAIALAQYLINMS-VELLRANLNG 786
+ + G DA+ +A Y + + VE L G
Sbjct: 234 LMVVGVADAVHIATYYVATTLVEQLTERFGG 264
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER V I G TQ
Sbjct: 388 QIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPQDNSNERLVTITG-----TQECN 441
Query: 143 QICLIMVDS 151
Q+ L M+ S
Sbjct: 442 QMALYMLYS 450
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
++ +P G+IIGKGG++I IR+ SG+ + + ++ NS ER V I G TQ
Sbjct: 388 QIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPQDNSNERLVTITG-----TQECN 441
Query: 588 QICLIMVDS 596
Q+ L M+ S
Sbjct: 442 QMALYMLYS 450
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES I +R ++ +++ ++IGKGG + IR S A V S+ + ER + + G D
Sbjct: 99 ESNWIHVRALITSAEAATVIGKGGENVTQIRRLSEAKCTV-SEYTRGAVERILTVSGGVD 157
Query: 136 AVTQAI 141
AV +A
Sbjct: 158 AVAKAF 163
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES I +R ++ +++ ++IGKGG + IR S A V S+ + ER + + G D
Sbjct: 99 ESNWIHVRALITSAEAATVIGKGGENVTQIRRLSEAKCTV-SEYTRGAVERILTVSGGVD 157
Query: 581 AVTQAI 586
AV +A
Sbjct: 158 AVAKAF 163
>gi|410922719|ref|XP_003974830.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Takifugu
rubripes]
Length = 434
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 116/244 (47%), Gaps = 21/244 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ + ++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYKASVSVPDSSGPERILSISADIKTVGEILLKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ + +G +LRL++ S GSIIG G++IK +RE + S+ +
Sbjct: 105 IPTLEEYQQY-------SGMDFDCELRLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP-----LPQNAGGPG 616
+ P ST+R V + G + V + I + ++ D+P KG PY P + G
Sbjct: 158 QECCPQSTDRVVLVGGKMERVVECIKTMLELIADAPIKGRAQPYDPNFYDETYEYGGFTV 217
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
+ + G + + G P GN G +S GG G ++SS+ +
Sbjct: 218 MFEERVGGRRPMGGFPSRGNRSSGGDRGFERMSSSRGGRG---------PMSSSRRDYDD 268
Query: 677 MPRN 680
PR
Sbjct: 269 SPRR 272
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 21/240 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ + ++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYKASVSVPDSSGPERILSISADIKTVGEILLKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ + +G +LRL++ S GSIIG G++IK +RE + S+ + +
Sbjct: 109 EEYQQY-------SGMDFDCELRLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP-----LPQNAGGPGLIGN 175
P ST+R V + G + V + I + ++ D+P KG PY P + G +
Sbjct: 162 PQSTDRVVLVGGKMERVVECIKTMLELIADAPIKGRAQPYDPNFYDETYEYGGFTVMFEE 221
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+ G + + G P GN G +S GG G ++SS+ + PR
Sbjct: 222 RVGGRRPMGGFPSRGNRSSGGDRGFERMSSSRGGRG---------PMSSSRRDYDDSPRR 272
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 359 VTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKI---DEPLEGSEDRIITITGTQDQI 415
Query: 322 ALAQYLINMSV 332
AQ+L+ SV
Sbjct: 416 QNAQFLLQSSV 426
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 359 VTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKI---DEPLEGSEDRIITITGTQDQI 415
Query: 767 ALAQYLINMSV 777
AQ+L+ SV
Sbjct: 416 QNAQFLLQSSV 426
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
++ ++ +P GSIIGKGG +IK IR SGA++ + + L S +R + I G D +
Sbjct: 358 VVTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKI-DEPLEGSEDRIITITGTQDQIQ 416
Query: 139 QAIY 142
A +
Sbjct: 417 NAQF 420
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
++ ++ +P GSIIGKGG +IK IR SGA++ + + L S +R + I G D +
Sbjct: 358 VVTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKI-DEPLEGSEDRIITITGTQDQIQ 416
Query: 584 QAIY 587
A +
Sbjct: 417 NAQF 420
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 146/337 (43%), Gaps = 84/337 (24%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGS--------- 490
R++ +++GS+IG+ G+ VK+LR ++ +KI I D+ ER+VT+ S
Sbjct: 46 FRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDE 105
Query: 491 --------MDSLFRAF-SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
D+LFR +I ++ E + H + +L+VP+ Q G +IG
Sbjct: 106 TDDLVSPAQDALFRVHQRVIAEDAREDEDEERNH---------VTAKLLVPSDQIGCVIG 156
Query: 542 KGGSQIKTIRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSP 597
KGG ++ IR +GA + + D LP ST+ V I G V +A++QI + D+P
Sbjct: 157 KGGQIVQNIRSETGAQIRILKDDRLPPCALSTDELVQISGEAAVVKKALFQIAAQIRDNP 216
Query: 598 PKGATIPYRPLP--QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
+ + +P GGPG GAP MG P G A G G++G
Sbjct: 217 SRSQHLLASAVPGGYATGGPG------------AGAPIMGVAPFVG-AYGGYKGDTG--- 260
Query: 656 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
+ +++ + P+ + + + P
Sbjct: 261 --------------------------DWSRSLY-------PAPRDEASMREFSVRFVCPT 287
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 752
IG VIGKGG I +IR+ SGA I++ S+ E +D
Sbjct: 288 GNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDC 324
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 143/330 (43%), Gaps = 84/330 (25%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGS---------------- 45
+++GS+IG+ G+ VK+LR ++ +KI I D+ ER+VT+ S
Sbjct: 53 RKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDETDDLVSP 112
Query: 46 -MDSLFRAF-SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 103
D+LFR +I ++ E + H + +L+VP+ Q G +IGKGG ++
Sbjct: 113 AQDALFRVHQRVIAEDAREDEDEERNH---------VTAKLLVPSDQIGCVIGKGGQIVQ 163
Query: 104 TIRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 159
IR +GA + + D LP ST+ V I G V +A++QI + D+P + +
Sbjct: 164 NIRSETGAQIRILKDDRLPPCALSTDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLL 223
Query: 160 YRPLP--QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 217
+P GGPG GAP MG P G A G G++G
Sbjct: 224 ASAVPGGYATGGPG------------AGAPIMGVAPFVG-AYGGYKGDTG---------- 260
Query: 218 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVI 277
+ +++ + P+ + + + P IG VI
Sbjct: 261 -------------------DWSRSLY-------PAPRDEASMREFSVRFVCPTGNIGGVI 294
Query: 278 GKGGTKIFEIRKISGAMIRISKSSEEEEDS 307
GKGG I +IR+ SGA I++ S+ E +D
Sbjct: 295 GKGGAIINQIRQDSGATIKVDSSATEGDDC 324
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 160/386 (41%), Gaps = 59/386 (15%)
Query: 219 LAALASSQLKTNHMPRN-------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 271
+ + SS +TNH Q+ H R + + ++++N +T ++ VP++
Sbjct: 90 VVTIHSSSEETNHFDETDDLVSPAQDALFRVHQRVIAEDAREDEDEERNHVTAKLLVPSD 149
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED--SNDRTITMTGTPDAIALAQYLIN 329
IG VIGKGG + IR +GA IRI K S D + ++G + A + I
Sbjct: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPPCALSTDELVQISGEAAVVKKALFQIA 209
Query: 330 MSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGA 389
+ D+ S +L +SA G P A A
Sbjct: 210 AQIR----------------DNPSRSQHLLASAVPGGYATGGPGAGA------------- 240
Query: 390 LNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG--VPQGPNYANIQTTGVQRRMRHIMQ 447
+ G++ + G+ GG G++G + P + A+++ V R +
Sbjct: 241 --------PIMGVAPFV--GAYGGYKGDTGDWSRSLYPAPRDEASMREFSV----RFVCP 286
Query: 448 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR-AFSLITKNIE 506
+G +IGK G + ++R++SG+ I + S+T +I S F +FS +
Sbjct: 287 TGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFEDSFSPTIEAAV 346
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS-DML 565
++ + + RL+VP S+ G +IGKGG+ + +R + A++ + S D L
Sbjct: 347 RLQPRCSEKVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKDNL 406
Query: 566 P---NSTEREVNIKGVPDAVTQAIYQ 588
P + + V I G D A+ Q
Sbjct: 407 PKIASEDDEMVQISGDLDVAKDALVQ 432
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR-AFSLITKNIEEFH 64
+G +IGK G + ++R++SG+ I + S+T +I S F +FS +
Sbjct: 290 IGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFEDSFSPTIEAAVRLQ 349
Query: 65 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS-DMLP-- 121
++ + + RL+VP S+ G +IGKGG+ + +R + A++ + S D LP
Sbjct: 350 PRCSEKVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKDNLPKI 409
Query: 122 -NSTEREVNIKGVPDAVTQAIYQ 143
+ + V I G D A+ Q
Sbjct: 410 ASEDDEMVQISGDLDVAKDALVQ 432
>gi|348517286|ref|XP_003446165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 435
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYKASVSVPDSSGPERILSISADIETVGEILLKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ + NG +LRL++ S GSIIG G++IK +RE + S+ +
Sbjct: 105 IPTLEEYQQY-------NGMDFDCELRLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P ST+R V + G + V + I + ++ ++P KG T PY P
Sbjct: 158 QECCPQSTDRVVLVGGKTERVVECIKTMLELISEAPIKGRTQPYDP 203
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYKASVSVPDSSGPERILSISADIETVGEILLKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ + NG +LRL++ S GSIIG G++IK +RE + S+ + +
Sbjct: 109 EEYQQY-------NGMDFDCELRLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P ST+R V + G + V + I + ++ ++P KG T PY P
Sbjct: 162 PQSTDRVVLVGGKTERVVECIKTMLELISEAPIKGRTQPYDP 203
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT++GT D I
Sbjct: 360 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITISGTQDQI 416
Query: 322 ALAQYLINMSVELLRANL 339
AQYL+ SV+ +L
Sbjct: 417 QNAQYLLQNSVKQYSGHL 434
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT++GT D I
Sbjct: 360 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITISGTQDQI 416
Query: 767 ALAQYLINMSVELLRANL 784
AQYL+ SV+ +L
Sbjct: 417 QNAQYLLQNSVKQYSGHL 434
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 359 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITISGTQDQIQ 417
Query: 139 QAIY 142
A Y
Sbjct: 418 NAQY 421
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 359 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITISGTQDQIQ 417
Query: 584 QAIY 587
A Y
Sbjct: 418 NAQY 421
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 372 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQIQNAQYLLQNSVKQY 430
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 372 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQIQNAQYLLQNSVKQY 430
>gi|432873594|ref|XP_004072294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Oryzias
latipes]
Length = 433
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRSDYNASVSVPDSSGPERILSISADIETVGEILLKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ + NG +LRL++ S GSIIG G++IK +RE + S+ +
Sbjct: 105 IPTLEEYQQY-------NGMDFDCELRLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P ST+R V + G + V + + + ++ ++P KG T PY P
Sbjct: 158 QECCPQSTDRVVLVGGKSERVVECVKTMLELISEAPIKGRTQPYDP 203
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRSDYNASVSVPDSSGPERILSISADIETVGEILLKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ + NG +LRL++ S GSIIG G++IK +RE + S+ + +
Sbjct: 109 EEYQQY-------NGMDFDCELRLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P ST+R V + G + V + + + ++ ++P KG T PY P
Sbjct: 162 PQSTDRVVLVGGKSERVVECVKTMLELISEAPIKGRTQPYDP 203
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 358 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 414
Query: 322 ALAQYLINMSVELLRANL 339
AQYL+ SV+ +L
Sbjct: 415 QNAQYLLQNSVKQYSGHL 432
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 358 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 414
Query: 767 ALAQYLINMSVELLRANL 784
AQYL+ SV+ +L
Sbjct: 415 QNAQYLLQNSVKQYSGHL 432
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 357 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 415
Query: 139 QAIY 142
A Y
Sbjct: 416 NAQY 419
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 357 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 415
Query: 584 QAIY 587
A Y
Sbjct: 416 NAQY 419
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 370 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 428
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 370 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 428
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 95/166 (57%), Gaps = 8/166 (4%)
Query: 432 NIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG 489
N T V RM + E +I+GK GET+ +++E S +++ +S+ PER++TV G
Sbjct: 74 NDDPTYVHFRM--LCSINETAAIVGKGGETINRIKEMSSARVNVSENLKGIPERVITVRG 131
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+ + +AF LIT+ I + NQ ES+ I L+L+ P + G IIGK G++ +
Sbjct: 132 PAEYVAKAFGLITRAIMDEPFNQ----ASTVESKQINLKLLFPHTIIGYIIGKRGARFRE 187
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
I + S A++ + +LP ST+R ++I GV DA+ A Y + +++
Sbjct: 188 IEDNSAAALKASDQILPASTDRILHITGVADAIHIATYYVAQTVIE 233
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +I+GK GET+ +++E S +++ +S+ PER++TV G + + +AF LIT+ I +
Sbjct: 90 ETAAIVGKGGETINRIKEMSSARVNVSENLKGIPERVITVRGPAEYVAKAFGLITRAIMD 149
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
NQ ES+ I L+L+ P + G IIGK G++ + I + S A++ + +LP
Sbjct: 150 EPFNQ----ASTVESKQINLKLLFPHTIIGYIIGKRGARFREIEDNSAAALKASDQILPA 205
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVD 150
ST+R ++I GV DA+ A Y + +++
Sbjct: 206 STDRILHITGVADAIHIATYYVAQTVIE 233
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 70 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
H N + + R++ ++ +I+GKGG I I+E S A V V S+ L ER +
Sbjct: 70 HRPTNDDPTYVHFRMLCSINETAAIVGKGGETINRIKEMSSARVNV-SENLKGIPERVIT 128
Query: 130 IKGVPDAVTQAIYQICLIMVDSP 152
++G + V +A I ++D P
Sbjct: 129 VRGPAEYVAKAFGLITRAIMDEP 151
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 515 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
H N + + R++ ++ +I+GKGG I I+E S A V V S+ L ER +
Sbjct: 70 HRPTNDDPTYVHFRMLCSINETAAIVGKGGETINRIKEMSSARVNV-SENLKGIPERVIT 128
Query: 575 IKGVPDAVTQAIYQICLIMVDSP 597
++G + V +A I ++D P
Sbjct: 129 VRGPAEYVAKAFGLITRAIMDEP 151
>gi|346322193|gb|EGX91792.1| KH domain RNA binding protein [Cordyceps militaris CM01]
Length = 464
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R ++ E +IIGK GE V +R+ S +K +SD ERI+TV G +D+ +AF
Sbjct: 108 HIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIVDAAAKAF 167
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI + + N+ S+ LRL++P GSIIGKGG++I+ I+E SGA +
Sbjct: 168 GLIIRTL----NNEPLTETSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARL 223
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ LP S+ER + + GV DAV A Y +
Sbjct: 224 NASDSCLPMSSERSLVVMGVADAVHIATYYV 254
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 81/142 (57%), Gaps = 6/142 (4%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
E +IIGK GE V +R+ S +K +SD ERI+TV G +D+ +AF LI + +
Sbjct: 117 EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIVDAAAKAFGLIIRTL-- 174
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N+ S+ LRL++P GSIIGKGG++I+ I+E SGA + + LP
Sbjct: 175 --NNEPLTETSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPM 232
Query: 123 STEREVNIKGVPDAVTQAIYQI 144
S+ER + + GV DAV A Y +
Sbjct: 233 SSERSLVVMGVADAVHIATYYV 254
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 390 MTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKI---NEPQDNSNERLVTVTGTEECN 446
Query: 322 ALAQYLI 328
+A YL+
Sbjct: 447 RMALYLL 453
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+++ +PN+++GA+IGKGG KI EIR++SG++I+I +E +++SN+R +T+TGT +
Sbjct: 390 MTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKI---NEPQDNSNERLVTVTGTEECN 446
Query: 767 ALAQYLI 773
+A YL+
Sbjct: 447 RMALYLL 453
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P+ LIG++IGKGG +I EI++ SGA R++ S S++R++ + G DA+ +A
Sbjct: 194 LLIPHILIGSIIGKGGARIREIQEASGA--RLNASDSCLPMSSERSLVVMGVADAVHIAT 251
Query: 771 YLINMSVELLRANLNGEGGG 790
Y + + L LN GG
Sbjct: 252 YYVGST---LLEQLNERFGG 268
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
+ E+ I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 101 HDETSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTV-SDYQKGAVERILTVSGI 159
Query: 134 PDAVTQAIYQICLIMVDSP 152
DA +A I + + P
Sbjct: 160 VDAAAKAFGLIIRTLNNEP 178
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
+ E+ I +R ++ + + +IIGKGG + IR+ S A V SD + ER + + G+
Sbjct: 101 HDETSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTV-SDYQKGAVERILTVSGI 159
Query: 579 PDAVTQAIYQICLIMVDSP 597
DA +A I + + P
Sbjct: 160 VDAAAKAFGLIIRTLNNEP 178
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
QN H G G Q+ +P G+IIGKGG +I IR+ SG+ + + ++ NS ER
Sbjct: 379 QNMHAGMPGAPMTQQI--YIPNDMVGAIIGKGGQKINEIRQLSGSVIKI-NEPQDNSNER 435
Query: 127 EVNIKGVPDAVTQAIY 142
V + G + A+Y
Sbjct: 436 LVTVTGTEECNRMALY 451
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 571
QN H G G Q+ +P G+IIGKGG +I IR+ SG+ + + ++ NS ER
Sbjct: 379 QNMHAGMPGAPMTQQI--YIPNDMVGAIIGKGGQKINEIRQLSGSVIKI-NEPQDNSNER 435
Query: 572 EVNIKGVPDAVTQAIY 587
V + G + A+Y
Sbjct: 436 LVTVTGTEECNRMALY 451
>gi|213410260|ref|XP_002175900.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces japonicus yFS275]
gi|212003947|gb|EEB09607.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces japonicus yFS275]
Length = 381
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 19/204 (9%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTV 487
YA Q T +R ++ +E G IIGKSG+ V +LR + K I+ + + +R++T+
Sbjct: 81 YATQQLT-----LRALLSTREAGIIIGKSGKNVAELRSTTNVKAGITKAVPNVHDRVLTI 135
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQ 546
GS++++ RA+ I I+ F KN G + +LRL++ S GSIIG+ G +
Sbjct: 136 SGSLENVVRAYRFI---IDIFAKNSTNANGTPVDPHAPRKLRLLIAHSLMGSIIGRNGLR 192
Query: 547 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPY 605
IK I++ + + DMLP STER V + G + + AI++I ++D +GA T+ Y
Sbjct: 193 IKLIQDKCSCRMIASKDMLPQSTERTVEVHGTVENLHAAIWEIGKCLIDDWERGAGTVFY 252
Query: 606 -------RPLPQNAGGPGLIGNQF 622
+P P A P + Q
Sbjct: 253 NPVSRLTQPFPTVATSPRAVSQQM 276
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 14/188 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITK 58
+ +E G IIGKSG+ V +LR + K I+ + + +R++T+ GS++++ RA+ I
Sbjct: 92 LSTREAGIIIGKSGKNVAELRSTTNVKAGITKAVPNVHDRVLTISGSLENVVRAYRFI-- 149
Query: 59 NIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
I+ F KN G + +LRL++ S GSIIG+ G +IK I++ + +
Sbjct: 150 -IDIFAKNSTNANGTPVDPHAPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIASK 208
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPY-------RPLPQNAGG 169
DMLP STER V + G + + AI++I ++D +GA T+ Y +P P A
Sbjct: 209 DMLPQSTERTVEVHGTVENLHAAIWEIGKCLIDDWERGAGTVFYNPVSRLTQPFPTVATS 268
Query: 170 PGLIGNQF 177
P + Q
Sbjct: 269 PRAVSQQM 276
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
QQ +IT+ +++P +++G +IG+ G+KI EIR+ SG+ I I+K E +++ +R T+TGT
Sbjct: 300 QQPRITQNISIPADMVGCIIGRAGSKISEIRRSSGSKISIAK--EPHDETGERMFTITGT 357
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
QQ +IT+ +++P +++G +IG+ G+KI EIR+ SG+ I I+K E +++ +R T+TGT
Sbjct: 300 QQPRITQNISIPADMVGCIIGRAGSKISEIRRSSGSKISIAK--EPHDETGERMFTITGT 357
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 56/209 (26%)
Query: 417 NSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS 476
NS G P P+ R++R ++ +GSIIG++G +K ++++ ++ S
Sbjct: 156 NSTNANGTPVDPH--------APRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIAS 207
Query: 477 DSSTP---ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ------- 526
P ER V V G++++L A I K + + + + N S+L Q
Sbjct: 208 KDMLPQSTERTVEVHGTVENLHAAIWEIGKCLIDDWERGAGTVFYNPVSRLTQPFPTVAT 267
Query: 527 --------------------------------------LRLIVPASQCGSIIGKGGSQIK 548
+ +PA G IIG+ GS+I
Sbjct: 268 SPRAVSQQMTPAIPSPMMDGGAAPYFFPPAAPQQPRITQNISIPADMVGCIIGRAGSKIS 327
Query: 549 TIRETSGASVYVASDMLPNSTEREVNIKG 577
IR +SG+ + +A + + ER I G
Sbjct: 328 EIRRSSGSKISIAKEPHDETGERMFTITG 356
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 50/237 (21%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIR-KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIAL 323
+ + + L+G++IG+ G +I I+ K S MI S + S +RT+ + GT + +
Sbjct: 174 RLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMI---ASKDMLPQSTERTVEVHGTVENLHA 230
Query: 324 AQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQI 383
A + I G+ +DD+ AG NP++ +
Sbjct: 231 AIWEI----------------GKCLIDDWERG---------AGTVFYNPVSRLTQPFPTV 265
Query: 384 LTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMR 443
T P A++ + + + D GG+ PQ P Q + M
Sbjct: 266 ATSPRAVSQQMTPAIPSPMMD--------GGAAPYFFPPAAPQQPRIT--QNISIPADM- 314
Query: 444 HIMQGKEVGSIIGKSGETVKKLREESGSKIYIS---DSSTPERIVTVIGSMDSLFRA 497
VG IIG++G + ++R SGSKI I+ T ER+ T+ G+ + RA
Sbjct: 315 -------VGCIIGRAGSKISEIRRSSGSKISIAKEPHDETGERMFTITGTHEENERA 364
>gi|395334662|gb|EJF67038.1| cytoplasmic protein [Dichomitus squalens LYAD-421 SS1]
Length = 327
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V +LRE++G K +S ER++TV GS++ + +A+S
Sbjct: 31 LRALVSTKDAGVIIGKAGKNVAELREQTGVKAGVSKVIPGVHERVLTVTGSVEGVAKAYS 90
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + N + + N S +RL++ + GS+IG+ G +IK I+++SGA +
Sbjct: 91 LIVSQL--VSANPSSPVTSNSSSPTTAIRLLISHNLMGSVIGRNGLKIKAIQDSSGARMV 148
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 607
+ DMLP STER V ++G +++ +AI +I +++ +G T+ + P
Sbjct: 149 ASKDMLPQSTERIVEVQGSSESIGRAIEEIGRCLLEDWERGVGTVLFHP 197
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V +LRE++G K +S ER++TV GS++ + +A+SLI +
Sbjct: 38 KDAGVIIGKAGKNVAELREQTGVKAGVSKVIPGVHERVLTVTGSVEGVAKAYSLIVSQL- 96
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
N + + N S +RL++ + GS+IG+ G +IK I+++SGA + + DMLP
Sbjct: 97 -VSANPSSPVTSNSSSPTTAIRLLISHNLMGSVIGRNGLKIKAIQDSSGARMVASKDMLP 155
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
STER V ++G +++ +AI +I +++ +G T+ + P
Sbjct: 156 QSTERIVEVQGSSESIGRAIEEIGRCLLEDWERGVGTVLFHP 197
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P + N + R + S + Q N T+ +++P++++G +IG+ GTKI EIR++SG
Sbjct: 210 PTGRRANGDGRGRTSPSPNSPSSPQGTNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSG 269
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+ I I+K E +++ +R T+ GTP+A A +L+ +E
Sbjct: 270 SKISIAK--EPHDETGERMFTIVGTPEANEKALFLLYNQLE 308
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
P + N + R + S + Q N T+ +++P++++G +IG+ GTKI EIR++SG
Sbjct: 210 PTGRRANGDGRGRTSPSPNSPSSPQGTNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSG 269
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
+ I I+K E +++ +R T+ GTP+A A +L+ +E
Sbjct: 270 SKISIAK--EPHDETGERMFTIVGTPEANEKALFLLYNQLE 308
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 40/186 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ +GS+IG++G +K +++ SG+++ S P ERIV V GS +S+ RA
Sbjct: 116 IRLLISHNLMGSVIGRNGLKIKAIQDSSGARMVASKDMLPQSTERIVEVQGSSESIGRAI 175
Query: 499 SLITKNIEE----------FHKNQNKHLGG----------NGE--------------SQL 524
I + + E FH G NG+ Q
Sbjct: 176 EEIGRCLLEDWERGVGTVLFHPGTGDERSGRRTHPTGRRANGDGRGRTSPSPNSPSSPQG 235
Query: 525 IQLR---LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
LR + +P+ G IIG+ G++I IR SG+ + +A + + ER I G P+A
Sbjct: 236 TNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEA 295
Query: 582 VTQAIY 587
+A++
Sbjct: 296 NEKALF 301
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 40/177 (22%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
+GS+IG++G +K +++ SG+++ S P ERIV V GS +S+ RA I + + E
Sbjct: 125 MGSVIGRNGLKIKAIQDSSGARMVASKDMLPQSTERIVEVQGSSESIGRAIEEIGRCLLE 184
Query: 63 ----------FHKNQNKHLGG----------NGE--------------SQLIQLR---LI 85
FH G NG+ Q LR +
Sbjct: 185 DWERGVGTVLFHPGTGDERSGRRTHPTGRRANGDGRGRTSPSPNSPSSPQGTNLRTQNIS 244
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+P+ G IIG+ G++I IR SG+ + +A + + ER I G P+A +A++
Sbjct: 245 IPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALF 301
>gi|390355846|ref|XP_003728637.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Strongylocentrotus purpuratus]
Length = 345
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGS-----MDSLFR 496
R ++ + G +I K G+ +K+LR + + + I DSS P+R++ ++ + +D +
Sbjct: 11 FRLLVSSNKAGGLIAKGGQNIKRLRSDYNATVSIPDSSGPDRVLQIVANSKENGLDIIEE 70
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
LI + + F G + L ++V SQ G+IIG+ G +IK +RE++
Sbjct: 71 LIPLIREEVSPFSD-------GEADPCTTTLSVLVQTSQVGAIIGRAGIKIKELRESTKT 123
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V V + LP STE V I G PDAV AI +I + ++P KG+ + Y P Q G
Sbjct: 124 KVKVFQECLPCSTESLVQINGTPDAVLLAIGEIYVTCSEAPIKGSVLLYDPSQQE----G 179
Query: 617 LIGNQ 621
+ NQ
Sbjct: 180 YVWNQ 184
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 91/175 (52%), Gaps = 16/175 (9%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGS-----MDSLFRAFSLITKNIE 61
G +I K G+ +K+LR + + + I DSS P+R++ ++ + +D + LI + +
Sbjct: 21 GGLIAKGGQNIKRLRSDYNATVSIPDSSGPDRVLQIVANSKENGLDIIEELIPLIREEVS 80
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
F G + L ++V SQ G+IIG+ G +IK +RE++ V V + LP
Sbjct: 81 PFSD-------GEADPCTTTLSVLVQTSQVGAIIGRAGIKIKELRESTKTKVKVFQECLP 133
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 176
STE V I G PDAV AI +I + ++P KG+ + Y P Q G + NQ
Sbjct: 134 CSTESLVQINGTPDAVLLAIGEIYVTCSEAPIKGSVLLYDPSQQE----GYVWNQ 184
>gi|330917577|ref|XP_003297863.1| hypothetical protein PTT_08419 [Pyrenophora teres f. teres 0-1]
gi|311329164|gb|EFQ93994.1| hypothetical protein PTT_08419 [Pyrenophora teres f. teres 0-1]
Length = 371
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 13/194 (6%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
YA Q T +R I+ KE G IIGK+G+ V LR+E+G + +S +R+++
Sbjct: 39 EYAESQLT-----LRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLS 93
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGS 545
V GS+ + +A+ L K + E +GG + +RL++ +Q G+IIG+ G
Sbjct: 94 VTGSLSGISKAYGLAAKGLLEGAPAMG--MGGVIRTDGTHPIRLLISHNQMGTIIGRQGL 151
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIP 604
+IK I++ SG + +MLP STER V ++G P + +A+++I ++D +G T+
Sbjct: 152 KIKQIQDASGVRMVAQKEMLPQSTERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVL 211
Query: 605 YRPL--PQNAGGPG 616
Y P+ Q GPG
Sbjct: 212 YNPVVRVQPGAGPG 225
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 98/174 (56%), Gaps = 8/174 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK+G+ V LR+E+G + +S +R+++V GS+ + +A+ L K +
Sbjct: 54 KEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGISKAYGLAAKGLL 113
Query: 62 EFHKNQNKHLGGNGESQLIQ-LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E +GG + +RL++ +Q G+IIG+ G +IK I++ SG + +ML
Sbjct: 114 EGAPAMG--MGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEML 171
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPL--PQNAGGPG 171
P STER V ++G P + +A+++I ++D +G T+ Y P+ Q GPG
Sbjct: 172 PQSTERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPVVRVQPGAGPG 225
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 181/406 (44%), Gaps = 64/406 (15%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS---MDSLFR 496
R++ K++GS+IG+ GE VK+LR ++ SKI I ++ + ER++T+ + +SL
Sbjct: 45 YRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEE 104
Query: 497 AFSLITKNIEEFHKNQNKHLGGN-------GESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+ ++ E K ++ + + G + RL+VP+ Q G IIGKGG ++
Sbjct: 105 SSDYVSPAQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQN 164
Query: 550 IRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
IR +GA V + D LP S++ V I G P V +A+YQI + D+P + +
Sbjct: 165 IRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLA 224
Query: 606 RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLA------------------GLAALGL 647
+ PG+ + + GAP MG PL L +
Sbjct: 225 SAI------PGVYSSGGSLMAPTHGAPIMGLAPLVSPYGGYKAPREDLSSKEFSLRLICP 278
Query: 648 GGNSGG--GMGGGL------NAAALAALASSQLKTNHMPRNQNQNQNQHNRNN------- 692
N GG G GG + A + SS + + N + + + +
Sbjct: 279 TENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAAL 338
Query: 693 RDGP--SQKTNQQQNQI--TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSS 746
R P S+K + I T + VP IG +IGKGG I E+R+++ A IRI ++
Sbjct: 339 RLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENL 398
Query: 747 EEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 792
+ +D + ++G D A L+++ V LRANL G S
Sbjct: 399 PKVALEDDEMVQISGDLDVAKEA--LVHI-VTRLRANLFDREGALS 441
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 178/399 (44%), Gaps = 64/399 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS---MDSLFRAFSLITK 58
K++GS+IG+ GE VK+LR ++ SKI I ++ + ER++T+ + +SL + ++
Sbjct: 52 KKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSP 111
Query: 59 NIEEFHKNQNKHLGGN-------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
E K ++ + + G + RL+VP+ Q G IIGKGG ++ IR +GA
Sbjct: 112 AQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA 171
Query: 112 SVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
V + D LP S++ V I G P V +A+YQI + D+P + + +
Sbjct: 172 QVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAI---- 227
Query: 168 GGPGLIGNQFGMQNSLMGAPDMGNNPLA------------------GLAALGLGGNSGG- 208
PG+ + + GAP MG PL L + N GG
Sbjct: 228 --PGVYSSGGSLMAPTHGAPIMGLAPLVSPYGGYKAPREDLSSKEFSLRLICPTENIGGV 285
Query: 209 -GMGGGL------NAAALAALASSQLKTNHMPRNQNQNQNQHNRNN-------RDGP--S 252
G GG + A + SS + + N + + + + R P S
Sbjct: 286 IGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCS 345
Query: 253 QKTNQQQNQI--TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSN 308
+K + I T + VP IG +IGKGG I E+R+++ A IRI ++ + +
Sbjct: 346 EKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALED 405
Query: 309 DRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 347
D + ++G D A L+++ V LRANL G S
Sbjct: 406 DEMVQISGDLDVAKEA--LVHI-VTRLRANLFDREGALS 441
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 56/337 (16%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED--SNDRTITMTGT 317
+Q+T + VP++ IG +IGKGG + IR +GA +RI K S+D + ++G
Sbjct: 138 HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGE 197
Query: 318 PDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAAL 377
P + A Y I + DN PS + + LA+A+
Sbjct: 198 PLIVKKALYQIASRLH---------------------DN--PS-------RSQHLLASAI 227
Query: 378 PQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTG 437
P + + G+L A T + + GL+ L+ +GG + P +
Sbjct: 228 PG---VYSSGGSLMAPTHGAPIMGLAPLVSP------------YGGY-KAPRE---DLSS 268
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP-ERIVTVIGSMDSLFR 496
+ +R I + +G +IGK G + ++R+E+ + I + S+T + + I S +
Sbjct: 269 KEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFED 328
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
++S + ++ + + RL+VP S+ G +IGKGG+ I +R + A
Sbjct: 329 SYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKA 388
Query: 557 SVYVAS-DMLPN---STEREVNIKGVPDAVTQAIYQI 589
++ + S + LP + V I G D +A+ I
Sbjct: 389 NIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHI 425
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 181/406 (44%), Gaps = 64/406 (15%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS---MDSLFR 496
R++ K++GS+IG+ GE VK+LR ++ SKI I ++ + ER++T+ + +SL
Sbjct: 45 YRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEE 104
Query: 497 AFSLITKNIEEFHKNQNKHLGGN-------GESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+ ++ E K ++ + + G + RL+VP+ Q G IIGKGG ++
Sbjct: 105 SSDYVSPAQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQN 164
Query: 550 IRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
IR +GA V + D LP S++ V I G P V +A+YQI + D+P + +
Sbjct: 165 IRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLA 224
Query: 606 RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLA------------------GLAALGL 647
+ PG+ + + GAP MG PL L +
Sbjct: 225 SAI------PGVYSSGGSLMAPTHGAPIMGLAPLVSPYGGYKAPREDLSSKEFSLRLICP 278
Query: 648 GGNSGG--GMGGGL------NAAALAALASSQLKTNHMPRNQNQNQNQHNRNN------- 692
N GG G GG + A + SS + + N + + + +
Sbjct: 279 TENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAAL 338
Query: 693 RDGP--SQKTNQQQNQI--TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSS 746
R P S+K + I T + VP IG +IGKGG I E+R+++ A IRI ++
Sbjct: 339 RLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENL 398
Query: 747 EEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 792
+ +D + ++G D A L+++ V LRANL G S
Sbjct: 399 PKVALEDDEMVQISGDLDVAKEA--LVHI-VTRLRANLFDREGALS 441
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 178/399 (44%), Gaps = 64/399 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS---MDSLFRAFSLITK 58
K++GS+IG+ GE VK+LR ++ SKI I ++ + ER++T+ + +SL + ++
Sbjct: 52 KKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSP 111
Query: 59 NIEEFHKNQNKHLGGN-------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
E K ++ + + G + RL+VP+ Q G IIGKGG ++ IR +GA
Sbjct: 112 AQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA 171
Query: 112 SVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
V + D LP S++ V I G P V +A+YQI + D+P + + +
Sbjct: 172 QVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAI---- 227
Query: 168 GGPGLIGNQFGMQNSLMGAPDMGNNPLA------------------GLAALGLGGNSGG- 208
PG+ + + GAP MG PL L + N GG
Sbjct: 228 --PGVYSSGGSLMAPTHGAPIMGLAPLVSPYGGYKAPREDLSSKEFSLRLICPTENIGGV 285
Query: 209 -GMGGGL------NAAALAALASSQLKTNHMPRNQNQNQNQHNRNN-------RDGP--S 252
G GG + A + SS + + N + + + + R P S
Sbjct: 286 IGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCS 345
Query: 253 QKTNQQQNQI--TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSN 308
+K + I T + VP IG +IGKGG I E+R+++ A IRI ++ + +
Sbjct: 346 EKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALED 405
Query: 309 DRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 347
D + ++G D A L+++ V LRANL G S
Sbjct: 406 DEMVQISGDLDVAKEA--LVHI-VTRLRANLFDREGALS 441
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 56/337 (16%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED--SNDRTITMTGT 317
+Q+T + VP++ IG +IGKGG + IR +GA +RI K S+D + ++G
Sbjct: 138 HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGE 197
Query: 318 PDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAAL 377
P + A Y I + DN PS + + LA+A+
Sbjct: 198 PLIVKKALYQIASRLH---------------------DN--PS-------RSQHLLASAI 227
Query: 378 PQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTG 437
P + + G+L A T + + GL+ L+ +GG + P +
Sbjct: 228 PG---VYSSGGSLMAPTHGAPIMGLAPLVSP------------YGGY-KAPRE---DLSS 268
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP-ERIVTVIGSMDSLFR 496
+ +R I + +G +IGK G + ++R+E+ + I + S+T + + I S +
Sbjct: 269 KEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFED 328
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
++S + ++ + + RL+VP S+ G +IGKGG+ I +R + A
Sbjct: 329 SYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKA 388
Query: 557 SVYVAS-DMLPN---STEREVNIKGVPDAVTQAIYQI 589
++ + S + LP + V I G D +A+ I
Sbjct: 389 NIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHI 425
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 148/338 (43%), Gaps = 81/338 (23%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R++ +++GSIIG+ GE +K+LR ++ SKI + ++ ER+VT+
Sbjct: 44 YRYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNEYED 103
Query: 490 -------SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+ D+LFR K I E + ++ G S + +L+VP+ Q G IIGK
Sbjct: 104 SGNYISPAQDALFRVHD---KVIAEDLQVEDDSEG----SPQVTAKLLVPSDQIGCIIGK 156
Query: 543 GGSQIKTIRETSGASVYVASD-MLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
GG ++ IR +GA + + D LP S++ V I G + +A+YQI + D+P
Sbjct: 157 GGQIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPS 216
Query: 599 KGATIPYRPLPQNAGGPGLIGNQFGMQNSLMG----APDMGNNPLAGLAALGLGGNSGGG 654
+ + +P N + SL+G AP +G PL G G G++ G
Sbjct: 217 RSQHLLVSAVP----------NVYSSVGSLVGPSAAAPIVGIAPLMGPYG-GFKGDT-GD 264
Query: 655 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVP 714
L +A LAS + + + P
Sbjct: 265 WSRSLYSAPRDELASKEF-----------------------------------SLRVVCP 289
Query: 715 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 752
IGAVIGKGGT I +IR+ SGA I++ S E +D
Sbjct: 290 TANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDC 327
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 145/331 (43%), Gaps = 81/331 (24%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------------- 44
+++GSIIG+ GE +K+LR ++ SKI + ++ ER+VT+
Sbjct: 51 RKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNEYEDSGNYISP 110
Query: 45 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
+ D+LFR K I E + ++ G S + +L+VP+ Q G IIGKGG ++
Sbjct: 111 AQDALFRVHD---KVIAEDLQVEDDSEG----SPQVTAKLLVPSDQIGCIIGKGGQIVQN 163
Query: 105 IRETSGASVYVASD-MLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
IR +GA + + D LP S++ V I G + +A+YQI + D+P + +
Sbjct: 164 IRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSRSQHLLV 223
Query: 161 RPLPQNAGGPGLIGNQFGMQNSLMG----APDMGNNPLAGLAALGLGGNSGGGMGGGLNA 216
+P N + SL+G AP +G PL G G G++ G L +
Sbjct: 224 SAVP----------NVYSSVGSLVGPSAAAPIVGIAPLMGPYG-GFKGDT-GDWSRSLYS 271
Query: 217 AALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAV 276
A LAS + + + P IGAV
Sbjct: 272 APRDELASKEF-----------------------------------SLRVVCPTANIGAV 296
Query: 277 IGKGGTKIFEIRKISGAMIRISKSSEEEEDS 307
IGKGGT I +IR+ SGA I++ S E +D
Sbjct: 297 IGKGGTIINQIRQESGATIKVDSSVAEGDDC 327
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 160/341 (46%), Gaps = 55/341 (16%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED--SNDRTITMTGTP 318
Q+T ++ VP++ IG +IGKGG + IR +GA+IRI K S+D + ++G
Sbjct: 138 QVTAKLLVPSDQIGCIIGKGGQIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISG-- 195
Query: 319 DAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALP 378
+A L + L ++ L DN PS + + L +A+P
Sbjct: 196 EAAVLKKALYQIASRL-------------------HDN--PS-------RSQHLLVSAVP 227
Query: 379 QLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFG-GVPQGPNYANIQTTG 437
+ + G+L ++ + + G++ L+G GG G++G + + P +
Sbjct: 228 N---VYSSVGSLVGPSAAAPIVGIAPLMG--PYGGFKGDTGDWSRSLYSAPR---DELAS 279
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSL 494
+ +R + +G++IGK G + ++R+ESG+ I + DSS E ++T+ S +
Sbjct: 280 KEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKV-DSSVAEGDDCLITI--SAKEI 336
Query: 495 FRAFSLITKNIEEFHKNQNKHLGGNGESQLIQL--RLIVPASQCGSIIGKGGSQIKTIRE 552
+ +S + ++ + +S LI RL+VP+S+ G ++GKGG+ I +R+
Sbjct: 337 YDHYSPTIEAAVRLQPRCSEKM--ERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRK 394
Query: 553 TSGASVYV-ASDMLP---NSTEREVNIKGVPDAVTQAIYQI 589
+ A + + + LP + + V I G D A+ QI
Sbjct: 395 LTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQI 435
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
+G++IGK G + ++R+ESG+ I + DSS E ++T+ S ++ +S +
Sbjct: 293 IGAVIGKGGTIINQIRQESGATIKV-DSSVAEGDDCLITI--SAKEIYDHYSPTIEAAVR 349
Query: 63 FHKNQNKHLGGNGESQLIQL--RLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDM 119
++ + +S LI RL+VP+S+ G ++GKGG+ I +R+ + A + + +
Sbjct: 350 LQPRCSEKM--ERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKEN 407
Query: 120 LP---NSTEREVNIKGVPDAVTQAIYQI 144
LP + + V I G D A+ QI
Sbjct: 408 LPKVASDDDEMVQIAGDLDVAKDALIQI 435
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED--SNDRTITMTGTP 763
Q+T ++ VP++ IG +IGKGG + IR +GA+IRI K S+D + ++G
Sbjct: 138 QVTAKLLVPSDQIGCIIGKGGQIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISGEA 197
Query: 764 DAIALAQYLI 773
+ A Y I
Sbjct: 198 AVLKKALYQI 207
>gi|169844143|ref|XP_001828793.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|116510164|gb|EAU93059.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 343
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 104/173 (60%), Gaps = 6/173 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V LRE++G K +S + ER++TV GS++++ +A++
Sbjct: 30 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIAGVHERVLTVTGSVEAVAKAYN 89
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI I + + + + +RL++ + G+IIG+ G +IK I++ SGA +
Sbjct: 90 LI---ISQLVSSNPAAPPASSSNVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMV 146
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQN 611
+ +MLP STER V ++G P+A+ +A+ +I +++ +G T+ + P P +
Sbjct: 147 ASKEMLPQSTERVVEVQGSPEAIGRAVEEIGKCLLEDWERGLGTVLFHPGPHD 199
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 100/166 (60%), Gaps = 6/166 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V LRE++G K +S + ER++TV GS++++ +A++LI I
Sbjct: 37 KDAGVIIGKAGKNVADLREQTGVKAGVSKVIAGVHERVLTVTGSVEAVAKAYNLI---IS 93
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ + + + +RL++ + G+IIG+ G +IK I++ SGA + + +MLP
Sbjct: 94 QLVSSNPAAPPASSSNVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMVASKEMLP 153
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQN 166
STER V ++G P+A+ +A+ +I +++ +G T+ + P P +
Sbjct: 154 QSTERVVEVQGSPEAIGRAVEEIGKCLLEDWERGLGTVLFHPGPHD 199
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 56/209 (26%)
Query: 435 TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSM 491
++ V +R ++ +G+IIG++G +K +++ SG+++ S P ER+V V GS
Sbjct: 107 SSNVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMVASKEMLPQSTERVVEVQGSP 166
Query: 492 DSLFRAFSLITKNIEE----------FH-----KNQNKHLGG---------------NGE 521
+++ RA I K + E FH + GG NG+
Sbjct: 167 EAIGRAVEEIGKCLLEDWERGLGTVLFHPGPHDDRSRSNRGGQYSGSYPTGGGSRRPNGD 226
Query: 522 S-----------------------QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
S L + +P+ G IIG+ G++I IR SG+ +
Sbjct: 227 SANRARAPSPGSPQSPSSSNPPATNLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGSKI 286
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+A ++ ER I G P+A +A++
Sbjct: 287 SIAKAPHDDTGERMFTIVGTPEANEKALF 315
>gi|388582172|gb|EIM22478.1| eukaryotic type KH-domain (KH-domain type I) [Wallemia sebi CBS
633.66]
Length = 319
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 163/358 (45%), Gaps = 65/358 (18%)
Query: 425 PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPE 482
PQ N I T +R ++ KE G IIGK G+ V LRE +G K +S + E
Sbjct: 10 PQQQNADEIDTLT----LRALVSTKEAGIIIGKGGKNVADLRERTGVKAGVSKVIAGVHE 65
Query: 483 RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
R++++ GS ++ AFS+I + I + N + + S +RL++ + G++IG+
Sbjct: 66 RVLSITGSTSAIADAFSIIAQTILDNPLNPSTAPLQSPPSATTAIRLLISHNLMGTVIGR 125
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKG 600
G +IK I++TSG + + ++LP STER V ++G +++ AI I CL + D
Sbjct: 126 QGIKIKQIQDTSGVRMVASKELLPQSTERIVEVQGTVESIHIAINDIAKCL-LEDWDRYS 184
Query: 601 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 660
TI Y P P N ++SL + N
Sbjct: 185 GTILYTPAPPN-------------EHSLFNS--------------------------SFN 205
Query: 661 AAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGA 720
+++ ++ S + + N N + N+ + Q I +M P +IG
Sbjct: 206 NSSIRSINSVR---------RPDNFNMQSLNSALPQPRDVRTQHISIPSDMVGP--IIG- 253
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
+ G++I EIR++S A I I+K +E + +R T+ GTP+A A L+ +E
Sbjct: 254 ---RAGSRISEIRRLSTAKIIIAKQPHDE--TGERLFTIIGTPEANEKALILLYSQLE 306
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 154/334 (46%), Gaps = 61/334 (18%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G IIGK G+ V LRE +G K +S + ER++++ GS ++ AFS+I + I
Sbjct: 30 KEAGIIIGKGGKNVADLRERTGVKAGVSKVIAGVHERVLSITGSTSAIADAFSIIAQTIL 89
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ N + + S +RL++ + G++IG+ G +IK I++TSG + + ++LP
Sbjct: 90 DNPLNPSTAPLQSPPSATTAIRLLISHNLMGTVIGRQGIKIKQIQDTSGVRMVASKELLP 149
Query: 122 NSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
STER V ++G +++ AI I CL + D TI Y P P N
Sbjct: 150 QSTERIVEVQGTVESIHIAINDIAKCL-LEDWDRYSGTILYTPAPPN------------- 195
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
++SL + N +++ ++ S + + N
Sbjct: 196 EHSLFNS--------------------------SFNNSSIRSINSVR---------RPDN 220
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
N + N+ + Q I +M P +IG + G++I EIR++S A I I+K
Sbjct: 221 FNMQSLNSALPQPRDVRTQHISIPSDMVGP--IIG----RAGSRISEIRRLSTAKIIIAK 274
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+E + +R T+ GTP+A A L+ +E
Sbjct: 275 QPHDE--TGERLFTIIGTPEANEKALILLYSQLE 306
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E + LR +V + G IIGKGG + +RE +G V S ++ ER ++I G
Sbjct: 17 EIDTLTLRALVSTKEAGIIIGKGGKNVADLRERTGVKAGV-SKVIAGVHERVLSITGSTS 75
Query: 136 AVTQAIYQICLIMVDSPPKGATIPYRPLP 164
A+ A I ++D+P +T P + P
Sbjct: 76 AIADAFSIIAQTILDNPLNPSTAPLQSPP 104
>gi|223649086|gb|ACN11301.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 440
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 46 LRILLQSKNAGAVIGKGGKNIKSLRTDFNASVSVPDSSGPERILSISAEIETVGEILLKI 105
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ + NG +LRL++ S GSIIG G++IK +RE + S+ +
Sbjct: 106 IPTLEEYQQY-------NGMDFDCELRLLIHQSLAGSIIGVKGAKIKELRENTQTSIKLF 158
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P ST+R V + G + V + I + ++ ++P KG PY P
Sbjct: 159 QECCPQSTDRVVLVGGKSERVVECIKIMLELIAEAPIKGRAQPYDP 204
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 50 LQSKNAGAVIGKGGKNIKSLRTDFNASVSVPDSSGPERILSISAEIETVGEILLKIIPTL 109
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ + NG +LRL++ S GSIIG G++IK +RE + S+ + +
Sbjct: 110 EEYQQY-------NGMDFDCELRLLIHQSLAGSIIGVKGAKIKELRENTQTSIKLFQECC 162
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P ST+R V + G + V + I + ++ ++P KG PY P
Sbjct: 163 PQSTDRVVLVGGKSERVVECIKIMLELIAEAPIKGRAQPYDP 204
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT++GT D I
Sbjct: 365 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITISGTQDQI 421
Query: 322 ALAQYLI-NMSVELL 335
AQYL+ N ++ LL
Sbjct: 422 QNAQYLLQNSALHLL 436
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT++GT D I
Sbjct: 365 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITISGTQDQI 421
Query: 767 ALAQYLI-NMSVELL 780
AQYL+ N ++ LL
Sbjct: 422 QNAQYLLQNSALHLL 436
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 364 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITISGTQDQIQ 422
Query: 139 QAIY 142
A Y
Sbjct: 423 NAQY 426
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 364 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITISGTQDQIQ 422
Query: 584 QAIY 587
A Y
Sbjct: 423 NAQY 426
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLI 56
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+
Sbjct: 377 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQIQNAQYLL 428
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLI 501
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+
Sbjct: 377 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQIQNAQYLL 428
>gi|209148569|gb|ACI32944.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 443
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVI 488
+Y + T +R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++
Sbjct: 33 SYKRSRNTEDMVELRILLQSKNAGAVIGKGGKNIKSLRTDFNASVSVPDSSGPERILSIG 92
Query: 489 GSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
++++ I +EE+ + NG +LRL++ S GSIIG G++IK
Sbjct: 93 AEIETVGDILLKIIPTLEEYQQY-------NGMDFDCELRLLIHQSLAGSIIGVKGAKIK 145
Query: 549 TIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+RE + ++ + + P ST+R V + G + V + I + ++ ++P KG T PY P
Sbjct: 146 ELRENTQTNIKLFQECCPQSTDRVVLVSGKSERVVECIKIMLDLIAEAPIKGRTQPYDP 204
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 50 LQSKNAGAVIGKGGKNIKSLRTDFNASVSVPDSSGPERILSIGAEIETVGDILLKIIPTL 109
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ + NG +LRL++ S GSIIG G++IK +RE + ++ + +
Sbjct: 110 EEYQQY-------NGMDFDCELRLLIHQSLAGSIIGVKGAKIKELRENTQTNIKLFQECC 162
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P ST+R V + G + V + I + ++ ++P KG T PY P
Sbjct: 163 PQSTDRVVLVSGKSERVVECIKIMLDLIAEAPIKGRTQPYDP 204
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT++GT D I
Sbjct: 368 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITISGTQDQI 424
Query: 322 ALAQYLI-NMSVELL 335
AQYL+ N ++ LL
Sbjct: 425 QNAQYLLQNSALHLL 439
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT++GT D I
Sbjct: 368 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITISGTQDQI 424
Query: 767 ALAQYLI-NMSVELL 780
AQYL+ N ++ LL
Sbjct: 425 QNAQYLLQNSALHLL 439
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 367 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITISGTQDQIQ 425
Query: 139 QAIY 142
A Y
Sbjct: 426 NAQY 429
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 367 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITISGTQDQIQ 425
Query: 584 QAIY 587
A Y
Sbjct: 426 NAQY 429
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLI 56
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+
Sbjct: 380 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQIQNAQYLL 431
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLI 501
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+
Sbjct: 380 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQIQNAQYLL 431
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 143/330 (43%), Gaps = 44/330 (13%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVI----GSMDSLF 495
R + +G+ IGKSG +K L++ +G++I I D+ PER++ VI G D
Sbjct: 22 FRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNGDGDVSL 81
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGE-SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
+ K E GNG +++ RL+V A Q G +IGKGG + IR +
Sbjct: 82 NPQEALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQAGGVIGKGGMVVAKIRADT 141
Query: 555 GASVYVASDMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN 611
G + V +D LP T + + I+G+ +V +A+ + + D PP T P
Sbjct: 142 GCRIRVLNDKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQDCPPLDRTKMMGTRPYE 201
Query: 612 AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ 671
A QN P G L M L + +A+++S
Sbjct: 202 A-----------FQNETSAVPHEGLTDL--------------NMDFRLQRS--SAISTSS 234
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFE 731
+++N +P + + NR + P + ++T + + IGAV+GKGG+ +
Sbjct: 235 IRSNGVPSKSHPLSVEDNRVSSLDP----EALKQEVTFRILCSGDRIGAVLGKGGSIVKA 290
Query: 732 IRKISGAMIRISKSSEEEEDSNDRTITMTG 761
++ +GA I + E E DR IT+T
Sbjct: 291 LQNETGANISVGPPVVECE---DRLITITA 317
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 141/326 (43%), Gaps = 44/326 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVI----GSMDSLFRAFS 54
+G+ IGKSG +K L++ +G++I I D+ PER++ VI G D
Sbjct: 26 CHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNGDGDVSLNPQE 85
Query: 55 LITKNIEEFHKNQNKHLGGNGE-SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
+ K E GNG +++ RL+V A Q G +IGKGG + IR +G +
Sbjct: 86 ALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQAGGVIGKGGMVVAKIRADTGCRI 145
Query: 114 YVASDMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGP 170
V +D LP T + + I+G+ +V +A+ + + D PP T P A
Sbjct: 146 RVLNDKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQDCPPLDRTKMMGTRPYEA--- 202
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
QN P G L M L + +A+++S +++N
Sbjct: 203 --------FQNETSAVPHEGLTDL--------------NMDFRLQRS--SAISTSSIRSN 238
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 290
+P + + NR + P + ++T + + IGAV+GKGG+ + ++
Sbjct: 239 GVPSKSHPLSVEDNRVSSLDP----EALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNE 294
Query: 291 SGAMIRISKSSEEEEDSNDRTITMTG 316
+GA I + E E DR IT+T
Sbjct: 295 TGANISVGPPVVECE---DRLITITA 317
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 62/371 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV--IGSMDSLF-- 495
R + G +G+++GK G VK L+ E+G+ I + +R++T+ + + +S F
Sbjct: 268 FRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVECEDRLITITALENPESRFSP 327
Query: 496 --RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
A L+ E + N ES + +L+VP++Q G ++GKGG+ + +R+
Sbjct: 328 AQEAVVLVFCRSIECCIEKVVDWRSNKESS-VTAQLVVPSNQVGVLLGKGGAIVSEMRKA 386
Query: 554 SGASVYVASD-MLPNST---EREVNIKGVPDAVTQAIY--------QICLIMVDSPPKGA 601
+ S+ + + +P ++ V I G V A+Y I LI +S G
Sbjct: 387 TWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNATRRLRDHIFLIAQNS---GG 443
Query: 602 TIPYR----PLPQNAGGPGLIGNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
T PYR +P GG ++G+ G +SL + D L L NSG
Sbjct: 444 TGPYRRPRDSIPLGLGGQSVVGSNHGPSIHSLSQSMDH----------LTLSRNSGRSAS 493
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQI--------- 707
G+ A + +S+ + R N R+G + + I
Sbjct: 494 SGVWAPKVVGGKNSRYTDDAGRR----------LNPREGDLELASGSNTVIGNAAIITNT 543
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT-ITMTGTPDAI 766
T E+ +PN++IG+V G+ G+ + ++R+ISGA + E ++DR I ++GTPD
Sbjct: 544 TVEIMLPNDIIGSVYGENGSNLDQLRQISGAKVVF---HEPRPGTSDRAKIVLSGTPDET 600
Query: 767 ALAQYLINMSV 777
AQ L+ +
Sbjct: 601 QAAQSLLQAYI 611
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 163/365 (44%), Gaps = 62/365 (16%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTV--IGSMDSLF----RAFS 54
G +G+++GK G VK L+ E+G+ I + +R++T+ + + +S F A
Sbjct: 274 GDRIGAVLGKGGSIVKALQNETGANISVGPPVVECEDRLITITALENPESRFSPAQEAVV 333
Query: 55 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
L+ E + N ES + +L+VP++Q G ++GKGG+ + +R+ + S+
Sbjct: 334 LVFCRSIECCIEKVVDWRSNKESS-VTAQLVVPSNQVGVLLGKGGAIVSEMRKATWTSIR 392
Query: 115 VASD-MLPNST---EREVNIKGVPDAVTQAIY--------QICLIMVDSPPKGATIPYR- 161
+ + +P ++ V I G V A+Y I LI +S G T PYR
Sbjct: 393 ITRNGEVPKCASFNDQVVQISGELPNVRDALYNATRRLRDHIFLIAQNS---GGTGPYRR 449
Query: 162 ---PLPQNAGGPGLIGNQFGMQ-NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA 217
+P GG ++G+ G +SL + D L L NSG G+ A
Sbjct: 450 PRDSIPLGLGGQSVVGSNHGPSIHSLSQSMDH----------LTLSRNSGRSASSGVWAP 499
Query: 218 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQI---------TKEMTV 268
+ +S+ + R N R+G + + I T E+ +
Sbjct: 500 KVVGGKNSRYTDDAGRR----------LNPREGDLELASGSNTVIGNAAIITNTTVEIML 549
Query: 269 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT-ITMTGTPDAIALAQYL 327
PN++IG+V G+ G+ + ++R+ISGA + E ++DR I ++GTPD AQ L
Sbjct: 550 PNDIIGSVYGENGSNLDQLRQISGAKVVF---HEPRPGTSDRAKIVLSGTPDETQAAQSL 606
Query: 328 INMSV 332
+ +
Sbjct: 607 LQAYI 611
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS--NDRTITMT 315
+++ +T ++ VP+ +G ++GKGG + E+RK + IRI+++ E + + ND+ + ++
Sbjct: 354 KESSVTAQLVVPSNQVGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQIS 413
Query: 316 G----TPDAIALAQYLINMSVELLRANLNGEG 343
G DA+ A + + L+ N G G
Sbjct: 414 GELPNVRDALYNATRRLRDHIFLIAQNSGGTG 445
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS--NDRTITMT 760
+++ +T ++ VP+ +G ++GKGG + E+RK + IRI+++ E + + ND+ + ++
Sbjct: 354 KESSVTAQLVVPSNQVGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQIS 413
Query: 761 G----TPDAIALAQYLINMSVELLRANLNGEG 788
G DA+ A + + L+ N G G
Sbjct: 414 GELPNVRDALYNATRRLRDHIFLIAQNSGGTG 445
>gi|449551271|gb|EMD42235.1| hypothetical protein CERSUDRAFT_110766 [Ceriporiopsis subvermispora
B]
Length = 324
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 99/169 (58%), Gaps = 5/169 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V LR+ +G K +S ER++TV GS++ + +A++
Sbjct: 30 LRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGVSKVIPGVHERVLTVSGSVEGVAKAYA 89
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + N + + SQ +RL++ + GS+IG+ G +IK I++ SGA +
Sbjct: 90 LIVSQL--VAANPSSPVSPTVPSQQTAIRLLISHNLMGSVIGRNGLKIKAIQDASGARMV 147
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRP 607
+ DMLP STER V ++G D++ +AI +I +++ +G T+ + P
Sbjct: 148 ASKDMLPQSTERIVEVQGASDSIGRAIEEIGRCLLEDWERGLGTVLFHP 196
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 95/162 (58%), Gaps = 5/162 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V LR+ +G K +S ER++TV GS++ + +A++LI +
Sbjct: 37 KDAGVIIGKAGKNVADLRDHTGVKAGVSKVIPGVHERVLTVSGSVEGVAKAYALIVSQL- 95
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
N + + SQ +RL++ + GS+IG+ G +IK I++ SGA + + DMLP
Sbjct: 96 -VAANPSSPVSPTVPSQQTAIRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASKDMLP 154
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRP 162
STER V ++G D++ +AI +I +++ +G T+ + P
Sbjct: 155 QSTERIVEVQGASDSIGRAIEEIGRCLLEDWERGLGTVLFHP 196
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 43/201 (21%)
Query: 425 PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP--- 481
P P + QT +R ++ +GS+IG++G +K +++ SG+++ S P
Sbjct: 103 PVSPTVPSQQTA-----IRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASKDMLPQST 157
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEE----------FH----KNQNKHLGGNGE------ 521
ERIV V G+ DS+ RA I + + E FH +++++ G +G
Sbjct: 158 ERIVEVQGASDSIGRAIEEIGRCLLEDWERGLGTVLFHPGSGEDRSRRSGNSGRRTNGDV 217
Query: 522 ---------------SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+ L + +P+ G IIG+ G++I IR SG+ + +A +
Sbjct: 218 RGRTSPSPHSPSSQPTNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHD 277
Query: 567 NSTEREVNIKGVPDAVTQAIY 587
+ ER I G P+A +A++
Sbjct: 278 ETGERMFTIVGTPEANEKALF 298
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
N T+ +++P++++G +IG+ GTKI EIR++SG+ I I+K E +++ +R T+ GTP+
Sbjct: 234 NLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAK--EPHDETGERMFTIVGTPE 291
Query: 320 AIALAQYLINMSVE 333
A A +L+ +E
Sbjct: 292 ANEKALFLLYNQLE 305
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
N T+ +++P++++G +IG+ GTKI EIR++SG+ I I+K E +++ +R T+ GTP+
Sbjct: 234 NLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAK--EPHDETGERMFTIVGTPE 291
Query: 765 AIALAQYLINMSVE 778
A A +L+ +E
Sbjct: 292 ANEKALFLLYNQLE 305
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 38/175 (21%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
+GS+IG++G +K +++ SG+++ S P ERIV V G+ DS+ RA I + + E
Sbjct: 124 MGSVIGRNGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGASDSIGRAIEEIGRCLLE 183
Query: 63 ----------FH----KNQNKHLGGNGE---------------------SQLIQLRLIVP 87
FH +++++ G +G + L + +P
Sbjct: 184 DWERGLGTVLFHPGSGEDRSRRSGNSGRRTNGDVRGRTSPSPHSPSSQPTNLRTQNISIP 243
Query: 88 ASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+ G IIG+ G++I IR SG+ + +A + + ER I G P+A +A++
Sbjct: 244 SDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALF 298
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
+++ LR +V G IIGK G + +R+ +G V S ++P ER + + G + V
Sbjct: 26 EVLTLRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGV-SKVIPGVHERVLTVSGSVEGV 84
Query: 138 TQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
+A I +V + P P P Q A
Sbjct: 85 AKAYALIVSQLVAANPSSPVSPTVPSQQTA 114
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
+++ LR +V G IIGK G + +R+ +G V S ++P ER + + G + V
Sbjct: 26 EVLTLRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGV-SKVIPGVHERVLTVSGSVEGV 84
Query: 583 TQAIYQICLIMVDSPPKGATIPYRPLPQNA 612
+A I +V + P P P Q A
Sbjct: 85 AKAYALIVSQLVAANPSSPVSPTVPSQQTA 114
>gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
Length = 313
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 152/334 (45%), Gaps = 84/334 (25%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GS+IGK G T+ + +SG++I +S + T +RI+ + G +D +A LI +
Sbjct: 47 GSVIGKGGATITDFQSQSGARIQLSKNYEFFPGTSDRIILISGGIDDALKALELIIAKLL 106
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA---SD 118
++ G + E ++ ++RL+VP + CGSIIGKGGS IK+ E S A + ++ +D
Sbjct: 107 SEIPTED---GDDAEPRM-RVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLDTD 162
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
L T+R V I G + + ++ I LI+ L +
Sbjct: 163 FL-GLTDRLVAITG---TLEEQMHAIDLIL---------------------SKLTDDTHY 197
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
+QN M A PL+ AA GLN A +
Sbjct: 198 LQN--MHA------PLSYAAAY-------NSTNHGLNGAGV------------------- 223
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
+ QHN+ +R N +T + V +E IG V+G+GG I EI + SGA I+IS
Sbjct: 224 -KFQHNKEDR----------TNSVT--IGVADEHIGLVVGRGGRNIMEISQNSGARIKIS 270
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+ +NDR IT+TG+ AI A+ +I V
Sbjct: 271 DRGDFMSGTNDRKITITGSQRAIHAAEDMIMQKV 304
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 152/334 (45%), Gaps = 84/334 (25%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
GS+IGK G T+ + +SG++I +S + T +RI+ + G +D +A LI +
Sbjct: 47 GSVIGKGGATITDFQSQSGARIQLSKNYEFFPGTSDRIILISGGIDDALKALELIIAKLL 106
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA---SD 563
++ G + E ++ ++RL+VP + CGSIIGKGGS IK+ E S A + ++ +D
Sbjct: 107 SEIPTED---GDDAEPRM-RVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLDTD 162
Query: 564 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFG 623
L T+R V I G + + ++ I LI+ L +
Sbjct: 163 FL-GLTDRLVAITG---TLEEQMHAIDLIL---------------------SKLTDDTHY 197
Query: 624 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 683
+QN M A PL+ AA GLN A +
Sbjct: 198 LQN--MHA------PLSYAAAY-------NSTNHGLNGAGV------------------- 223
Query: 684 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 743
+ QHN+ +R N +T + V +E IG V+G+GG I EI + SGA I+IS
Sbjct: 224 -KFQHNKEDR----------TNSVT--IGVADEHIGLVVGRGGRNIMEISQNSGARIKIS 270
Query: 744 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+ +NDR IT+TG+ AI A+ +I V
Sbjct: 271 DRGDFMSGTNDRKITITGSQRAIHAAEDMIMQKV 304
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 30/175 (17%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST-----PERIVTVIGSMDSLF 495
R+R ++ GSIIGK G +K EES + I IS T +R+V + G+++
Sbjct: 122 RVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAITGTLEEQM 181
Query: 496 RAFSLI-TKNIEEFHKNQNKH----------------------LGGNGESQLIQLRLIVP 532
A LI +K ++ H QN H N E + + + V
Sbjct: 182 HAIDLILSKLTDDTHYLQNMHAPLSYAAAYNSTNHGLNGAGVKFQHNKEDRTNSVTIGVA 241
Query: 533 ASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQA 585
G ++G+GG I I + SGA + ++ D + + +R++ I G A+ A
Sbjct: 242 DEHIGLVVGRGGRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGSQRAIHAA 296
>gi|448085571|ref|XP_004195892.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
gi|359377314|emb|CCE85697.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
Length = 492
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +I+GK GE + +R+++ +I +S++ + PERI++V G +++ +AF LI + I
Sbjct: 137 KEASTIVGKKGEKINHIRDKANVRINVSENLKNVPERIISVRGPAENVAKAFGLIARTIL 196
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E +++ + S+ L+L+VP G IIGK G + + I ++S A + A LP
Sbjct: 197 EEPEDEPASIL----SRQYNLKLLVPHPMVGFIIGKQGVKFREIEDSSAAKLKAAEQPLP 252
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRP 162
ST+R ++I GV DA+ AIY I +M+ D K + Y P
Sbjct: 253 YSTDRILSITGVGDAIHIAIYYISQVMIEHKDCLKKNKVVYYNP 296
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 506
KE +I+GK GE + +R+++ +I +S++ + PERI++V G +++ +AF LI + I
Sbjct: 137 KEASTIVGKKGEKINHIRDKANVRINVSENLKNVPERIISVRGPAENVAKAFGLIARTIL 196
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E +++ + S+ L+L+VP G IIGK G + + I ++S A + A LP
Sbjct: 197 EEPEDEPASIL----SRQYNLKLLVPHPMVGFIIGKQGVKFREIEDSSAAKLKAAEQPLP 252
Query: 567 NSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRP 607
ST+R ++I GV DA+ AIY I +M+ D K + Y P
Sbjct: 253 YSTDRILSITGVGDAIHIAIYYISQVMIEHKDCLKKNKVVYYNP 296
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE K + H + + R+ P + +I+GK G +I IR+ + + V S+ L
Sbjct: 109 EEVPKPVSNHREKESDPTYVSFRMYCPVKEASTIVGKKGEKINHIRDKANVRINV-SENL 167
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
N ER ++++G + V +A I +++ P
Sbjct: 168 KNVPERIISVRGPAENVAKAFGLIARTILEEP 199
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
Q ++ VP+ ++G +IGK G K EI S A ++ + + S DR +++TG DA
Sbjct: 210 QYNLKLLVPHPMVGFIIGKQGVKFREIEDSSAA--KLKAAEQPLPYSTDRILSITGVGDA 267
Query: 321 IALAQYLI 328
I +A Y I
Sbjct: 268 IHIAIYYI 275
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
Q ++ VP+ ++G +IGK G K EI S A ++ + + S DR +++TG DA
Sbjct: 210 QYNLKLLVPHPMVGFIIGKQGVKFREIEDSSAA--KLKAAEQPLPYSTDRILSITGVGDA 267
Query: 766 IALAQYLI 773
I +A Y I
Sbjct: 268 IHIAIYYI 275
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEED-------SNDRT 311
++ +++ V N IG+VIGKGG I +IR+ SG ++I + +N R
Sbjct: 403 DKFYQDVFVANANIGSVIGKGGHNIKQIRENSGCTYVKIEPDQRQSIMLGGGRGLTNIRK 462
Query: 312 ITMTGTPDAIALAQYLINMSV 332
+T+TG+ +I +A YLIN +
Sbjct: 463 LTLTGSLQSIQIAIYLINSRI 483
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEED-------SNDRT 756
++ +++ V N IG+VIGKGG I +IR+ SG ++I + +N R
Sbjct: 403 DKFYQDVFVANANIGSVIGKGGHNIKQIRENSGCTYVKIEPDQRQSIMLGGGRGLTNIRK 462
Query: 757 ITMTGTPDAIALAQYLINMSV 777
+T+TG+ +I +A YLIN +
Sbjct: 463 LTLTGSLQSIQIAIYLINSRI 483
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 234/538 (43%), Gaps = 83/538 (15%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE--EDSNDRTITMTGTPDAIA 322
+ V N IG++IGKGG I ++R SGA I+I + E S D + ++G DA A
Sbjct: 148 RLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISG--DAAA 205
Query: 323 LAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQL-- 380
+ + L +S L + +P S L N S+ + +P
Sbjct: 206 VKKALYAVSAFLFK---------------HPPKEQIPWSVILPETNQSSLPPSGVPTFPP 250
Query: 381 AQILTKPGALNALTSLSA--LGGLSDL--LGGGSSGGGSGNSGGFGGVPQGPNYANIQT- 435
A L + +L +LSA LG S L LGG S GS +P + N T
Sbjct: 251 ANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPSFSKFGNSTTK 310
Query: 436 -TGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP--ERIVTVIGSMD 492
T + +R + ++G +IGK G T+K +R ++G+ I + D+ T ER++ V S
Sbjct: 311 KTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVV--SAT 368
Query: 493 SLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
L A ++ IE Q K G + I R +VP+ G ++GKGG+ I +R+
Sbjct: 369 EL--ADDRVSPTIEAVLLLQGKTSGTTDKDGAISTRFLVPSKHIGCLLGKGGNIISEMRK 426
Query: 553 TSGASVYV-ASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-------- 600
+ A++ + D P + E V + G P A+ QI + ++ K
Sbjct: 427 QTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKRLRENIFKDKDGASNTD 486
Query: 601 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 660
+ +P L + P + + +G + + +P +AG +A GL G G G +
Sbjct: 487 SVLPLSSLSVPSAVP--LSSSYGTRKYDIVSP---RGAIAGRSAAGLSGFGALQAGTG-S 540
Query: 661 AAALAALASSQ-----LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
A+L A ++ L H+ N+ PS E +PN
Sbjct: 541 YASLQPYAPTRTFGIGLSGGHL-------------NSSLAPSH-----------EFAIPN 576
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+ +V+G+GG+ I IR+ISGA +++ + ++DR + ++GTP+ AQ LI
Sbjct: 577 SAVSSVLGRGGSNISHIREISGATVKL---RDPITGASDRVVEISGTPEQSHAAQSLI 631
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 168/386 (43%), Gaps = 83/386 (21%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS------------------ 45
+GS+IGK G+ +K +R+E+ SKI ++D+ ER++ + S
Sbjct: 53 IGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENE 112
Query: 46 -----MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
D L R S+I + + +K + RL+V SQ GS+IGKGG+
Sbjct: 113 PVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDA-------RLLVANSQIGSLIGKGGN 165
Query: 101 QIKTIRETSGASVYVA-SDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 156
I+ +R SGA + + D LP S + V I G AV +A+Y + + PPK
Sbjct: 166 NIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPK-E 224
Query: 157 TIPYRP-LPQN-------AGGPGLI-GNQFGMQNSLMGAPDMGNNPLAGLAAL--GLGGN 205
IP+ LP+ +G P N +SL G ++ + P+ G A+ GLGG
Sbjct: 225 QIPWSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNL-SAPILGYASRLPGLGGY 283
Query: 206 -SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 264
S G L+ AL + + T T + + +
Sbjct: 284 GSEAGSAWPLSNPALPSFSKFGNST-------------------------TKKTSEEFSI 318
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ PN+ IG VIGKGG I +R +GA IR+ + E S++R I ++ T LA
Sbjct: 319 RVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTE---SDERVIVVSAT----ELA 371
Query: 325 QYLINMSVELLRANLNGEGGGESNMD 350
++ ++E + L G+ G ++ D
Sbjct: 372 DDRVSPTIEAVLL-LQGKTSGTTDKD 396
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 168/386 (43%), Gaps = 83/386 (21%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS------------------ 490
+GS+IGK G+ +K +R+E+ SKI ++D+ ER++ + S
Sbjct: 53 IGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENE 112
Query: 491 -----MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 545
D L R S+I + + +K + RL+V SQ GS+IGKGG+
Sbjct: 113 PVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDA-------RLLVANSQIGSLIGKGGN 165
Query: 546 QIKTIRETSGASVYVA-SDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
I+ +R SGA + + D LP S + V I G AV +A+Y + + PPK
Sbjct: 166 NIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPK-E 224
Query: 602 TIPYRP-LPQN-------AGGPGLI-GNQFGMQNSLMGAPDMGNNPLAGLAAL--GLGGN 650
IP+ LP+ +G P N +SL G ++ + P+ G A+ GLGG
Sbjct: 225 QIPWSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNL-SAPILGYASRLPGLGGY 283
Query: 651 -SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 709
S G L+ AL + + T T + + +
Sbjct: 284 GSEAGSAWPLSNPALPSFSKFGNST-------------------------TKKTSEEFSI 318
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ PN+ IG VIGKGG I +R +GA IR+ + E S++R I ++ T LA
Sbjct: 319 RVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTE---SDERVIVVSAT----ELA 371
Query: 770 QYLINMSVELLRANLNGEGGGESNMD 795
++ ++E + L G+ G ++ D
Sbjct: 372 DDRVSPTIEAVLL-LQGKTSGTTDKD 396
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 147/332 (44%), Gaps = 56/332 (16%)
Query: 16 TVKKLREESGSKIYISDSSTP--ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGG 73
T+K +R ++G+ I + D+ T ER++ V S L A ++ IE Q K G
Sbjct: 337 TIKSMRNDTGASIRVEDAQTESDERVIVV--SATEL--ADDRVSPTIEAVLLLQGKTSGT 392
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDMLP---NSTEREVN 129
+ I R +VP+ G ++GKGG+ I +R+ + A++ + D P + E V
Sbjct: 393 TDKDGAISTRFLVPSKHIGCLLGKGGNIISEMRKQTRANIRIFRKDERPICVSENEELVQ 452
Query: 130 IKGVPDAVTQAIYQICLIMVDSPPK--------GATIPYRPLPQNAGGPGLIGNQFGMQN 181
+ G P A+ QI + ++ K + +P L + P + + +G +
Sbjct: 453 VTGEPGVAKDALIQILKRLRENIFKDKDGASNTDSVLPLSSLSVPSAVP--LSSSYGTRK 510
Query: 182 SLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ-----LKTNHMPRNQ 236
+ +P +AG +A GL G G G + A+L A ++ L H+
Sbjct: 511 YDIVSP---RGAIAGRSAAGLSGFGALQAGTG-SYASLQPYAPTRTFGIGLSGGHL---- 562
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
N+ PS E +PN + +V+G+GG+ I IR+ISGA ++
Sbjct: 563 ---------NSSLAPSH-----------EFAIPNSAVSSVLGRGGSNISHIREISGATVK 602
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+ + ++DR + ++GTP+ AQ LI
Sbjct: 603 L---RDPITGASDRVVEISGTPEQSHAAQSLI 631
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 41/269 (15%)
Query: 250 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE--EDS 307
G + T + I+ VP++ IG ++GKGG I E+RK + A IRI + E
Sbjct: 387 GKTSGTTDKDGAISTRFLVPSKHIGCLLGKGGNIISEMRKQTRANIRIFRKDERPICVSE 446
Query: 308 NDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDF--SSDNNLPSSAPLA 365
N+ + +TG P +A+ + ++ LR N+ + G SN D S ++PS+ PL+
Sbjct: 447 NEELVQVTGEP---GVAKDALIQILKRLRENIFKDKDGASNTDSVLPLSSLSVPSAVPLS 503
Query: 366 GLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVP 425
+ P+ A+ SA G L G G+ G+G+
Sbjct: 504 SSYGTRKYDIVSPR-----------GAIAGRSAAG----LSGFGALQAGTGSYASLQ--- 545
Query: 426 QGPNYANIQTTGVQRRMRHI-----------MQGKEVGSIIGKSGETVKKLREESGSKIY 474
YA +T G+ H+ + V S++G+ G + +RE SG+ +
Sbjct: 546 ---PYAPTRTFGIGLSGGHLNSSLAPSHEFAIPNSAVSSVLGRGGSNISHIREISGATVK 602
Query: 475 ISDSST--PERIVTVIGSMDSLFRAFSLI 501
+ D T +R+V + G+ + A SLI
Sbjct: 603 LRDPITGASDRVVEISGTPEQSHAAQSLI 631
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 695 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE--EDS 752
G + T + I+ VP++ IG ++GKGG I E+RK + A IRI + E
Sbjct: 387 GKTSGTTDKDGAISTRFLVPSKHIGCLLGKGGNIISEMRKQTRANIRIFRKDERPICVSE 446
Query: 753 NDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDF--SSDNNLPSSAPLA 810
N+ + +TG P +A+ + ++ LR N+ + G SN D S ++PS+ PL+
Sbjct: 447 NEELVQVTGEP---GVAKDALIQILKRLRENIFKDKDGASNTDSVLPLSSLSVPSAVPLS 503
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 134
R++ P++ GS+IGKGG IK++R+ + + + VA D +P ER + I P
Sbjct: 44 YRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVA-DAVPGVDERVIVIFSSP 95
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 579
R++ P++ GS+IGKGG IK++R+ + + + VA D +P ER + I P
Sbjct: 44 YRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVA-DAVPGVDERVIVIFSSP 95
>gi|154794959|gb|ABS86515.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
gi|154794965|gb|ABS86518.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
gi|154794968|gb|ABS86519.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 270
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 36/282 (12%)
Query: 37 ERIVTVIGSMDSLFRAFSLITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 94
+R+++V G ++ + +A+S++ I + + +R++V + GSI
Sbjct: 6 DRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSI 65
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 152
IG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI++I CL M D
Sbjct: 66 IGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWE 124
Query: 153 PKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 211
T+ Y+P A GP G+ G + G G G SGG M
Sbjct: 125 RAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRAGSGVPSGGHMS 181
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------I 262
G + P +N N H+ N +G + N +
Sbjct: 182 GDV------------------PGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 223
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 304
T+ +++P +++G +IGKGG KI EIR++SG+ I I+K+ ++
Sbjct: 224 TQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAKTPHDD 265
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 36/282 (12%)
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
+R+++V G ++ + +A+S++ I + + +R++V + GSI
Sbjct: 6 DRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSI 65
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 597
IG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI++I CL M D
Sbjct: 66 IGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWE 124
Query: 598 PKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
T+ Y+P A GP G+ G + G G G SGG M
Sbjct: 125 RAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRAGSGVPSGGHMS 181
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------I 707
G + P +N N H+ N +G + N +
Sbjct: 182 GDV------------------PGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 223
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 749
T+ +++P +++G +IGKGG KI EIR++SG+ I I+K+ ++
Sbjct: 224 TQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAKTPHDD 265
>gi|354542879|emb|CCE39597.1| hypothetical protein CPAR2_600100 [Candida parapsilosis]
Length = 607
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 21/170 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +++GK G + LRE++ KI IS++ PERI+TV G+ +++ +AF LI + I
Sbjct: 221 KEASTVVGKGGAKINHLREKAQVKIQISENLKDVPERIITVKGTAENVAKAFGLIVRTI- 279
Query: 62 EFHKNQNKHLG------GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
LG N SQ L+L++P G IIGK G + + I E S A +
Sbjct: 280 ---------LGEPEDEPANLNSQQYNLKLLIPNVIIGHIIGKQGLKFREIEENSAAKLKA 330
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRP 162
A LP+ST+R +++ GV DA+ A+Y I +++ D +G I Y P
Sbjct: 331 AESPLPHSTDRVLSVLGVADAIHIAVYFIGEVVIEHKDVLKRGKVILYNP 380
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 21/170 (12%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 506
KE +++GK G + LRE++ KI IS++ PERI+TV G+ +++ +AF LI + I
Sbjct: 221 KEASTVVGKGGAKINHLREKAQVKIQISENLKDVPERIITVKGTAENVAKAFGLIVRTI- 279
Query: 507 EFHKNQNKHLG------GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
LG N SQ L+L++P G IIGK G + + I E S A +
Sbjct: 280 ---------LGEPEDEPANLNSQQYNLKLLIPNVIIGHIIGKQGLKFREIEENSAAKLKA 330
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRP 607
A LP+ST+R +++ GV DA+ A+Y I +++ D +G I Y P
Sbjct: 331 AESPLPHSTDRVLSVLGVADAIHIAVYFIGEVVIEHKDVLKRGKVILYNP 380
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 248 RDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 307
D P+ +QQ N ++ +PN +IG +IGK G K EI + S A ++ ++S S
Sbjct: 284 EDEPANLNSQQYNL---KLLIPNVIIGHIIGKQGLKFREIEENSAAKLKAAESPLPH--S 338
Query: 308 NDRTITMTGTPDAIALAQYLI 328
DR +++ G DAI +A Y I
Sbjct: 339 TDRVLSVLGVADAIHIAVYFI 359
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 693 RDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 752
D P+ +QQ N ++ +PN +IG +IGK G K EI + S A ++ ++S S
Sbjct: 284 EDEPANLNSQQYNL---KLLIPNVIIGHIIGKQGLKFREIEENSAAKLKAAESPLPH--S 338
Query: 753 NDRTITMTGTPDAIALAQYLI 773
DR +++ G DAI +A Y I
Sbjct: 339 TDRVLSVLGVADAIHIAVYFI 359
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+ R+ P + +++GKGG++I +RE + + + S+ L + ER + +KG + V
Sbjct: 211 YVSFRMYCPVKEASTVVGKGGAKINHLREKAQVKIQI-SENLKDVPERIITVKGTAENVA 269
Query: 139 QAIYQICLIMVDSP 152
+A I ++ P
Sbjct: 270 KAFGLIVRTILGEP 283
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 148/340 (43%), Gaps = 62/340 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
+R ++ GS+IGK G T+ + +SG++I +S + T +RI+ V G+++ + R
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQR 97
Query: 497 AFSLI-TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
A LI +K + E H + N ++RL+VP CG IIGKGG I++ E S
Sbjct: 98 AVELILSKLLSELHSEDD-----NDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQ 152
Query: 556 ASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
A + ++ + +R V + G D +AI I + + P ++
Sbjct: 153 AGIKISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQSM---------- 202
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
N+P + + G G L + A A + +
Sbjct: 203 ----------------------NSPFS-YPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYR 239
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N + QN + ++ N +T M V +E IG V+G+GG I EI
Sbjct: 240 PNGTAGGKLQNSKE--------------ERSNSLT--MGVADEHIGLVVGRGGRNIMEIS 283
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
++SGA I+IS + + DR +T+TG+ AI A+ +I
Sbjct: 284 QVSGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMI 323
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 62/330 (18%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLI-TKNI 60
GS+IGK G T+ + +SG++I +S + T +RI+ V G+++ + RA LI +K +
Sbjct: 48 GSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLL 107
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SD 118
E H + N ++RL+VP CG IIGKGG I++ E S A + ++ +
Sbjct: 108 SELHSEDD-----NDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDN 162
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
+R V + G D +AI I + + P ++
Sbjct: 163 NYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQSM-------------------- 202
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
N+P + + G G L + A A + + N + Q
Sbjct: 203 ------------NSPFS-YPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGTAGGKLQ 249
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
N + ++ N +T M V +E IG V+G+GG I EI ++SGA I+IS
Sbjct: 250 NSKE--------------ERSNSLT--MGVADEHIGLVVGRGGRNIMEISQVSGARIKIS 293
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+ + DR +T+TG+ AI A+ +I
Sbjct: 294 DRGDYISGTTDRKVTITGSQRAIRTAESMI 323
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 108/261 (41%), Gaps = 52/261 (19%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S+ N + + + VPN G +IGKGG I + S A I+IS NDR
Sbjct: 112 SEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDNNYYGQNDRL 171
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN 371
+ +TGT D A +EL+ + L + ++ N P S P +
Sbjct: 172 VMLTGTFDEQMRA-------IELIVSKLAED-------PHYAQSMNSPFSYPGVYFSGYQ 217
Query: 372 --PLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPN 429
P LP +A P A NA+ + G++GG NS
Sbjct: 218 GVPYTYVLPSVA-----PPAYNAV----------NYRPNGTAGGKLQNS--------KEE 254
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPERI 484
+N T GV + +G ++G+ G + ++ + SG++I ISD S T +R
Sbjct: 255 RSNSLTMGV--------ADEHIGLVVGRGGRNIMEISQVSGARIKISDRGDYISGTTDRK 306
Query: 485 VTVIGSMDSLFRAFSLITKNI 505
VT+ GS ++ A S+I + +
Sbjct: 307 VTITGSQRAIRTAESMILQKV 327
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDMLPNSTEREVNIK 131
+ E + +R +V S GS+IGKGGS I + SGA + ++ + P +T+R + +
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 89
Query: 132 GVPDAVTQAI 141
G + + +A+
Sbjct: 90 GAINEIQRAV 99
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDMLPNSTEREVNIK 576
+ E + +R +V S GS+IGKGGS I + SGA + ++ + P +T+R + +
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 89
Query: 577 GVPDAVTQAI 586
G + + +A+
Sbjct: 90 GAINEIQRAV 99
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
V N G+VIGKGG+ I + + SGA I++S++ E + DR I ++G + I A
Sbjct: 42 VSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRA--- 98
Query: 328 INMSVELLRANLNGEGGGESNMD 350
VEL+ + L E E + D
Sbjct: 99 ----VELILSKLLSELHSEDDND 117
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 772
V N G+VIGKGG+ I + + SGA I++S++ E + DR I ++G + I A
Sbjct: 42 VSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRA--- 98
Query: 773 INMSVELLRANLNGEGGGESNMD 795
VEL+ + L E E + D
Sbjct: 99 ----VELILSKLLSELHSEDDND 117
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 128/540 (23%), Positives = 238/540 (44%), Gaps = 66/540 (12%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR-ISKSSEEEEDS 307
D ++ N+ + QI VP+ +IGK G I ++R + I+ + K + + E S
Sbjct: 136 DSEKKRKNKDECQIL----VPSSQSAILIGKAGATIKQLRVKTRTNIKVVPKDAADPEHS 191
Query: 308 ---NDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL 364
+ G +A+ A L +S + + + + ++ + + +PS P+
Sbjct: 192 CAMEFDNFVLVGESEAVKRA--LFAVSTIMYKFSPKEDIPLDTTVPETPHSIIIPSELPI 249
Query: 365 A---GLN-ASNPLA--AALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNS 418
GL AS+P+ + PQL + A T GG +D +GN+
Sbjct: 250 YPPGGLYPASDPIVQPRSFPQL---------IGATTMQDLHGGYAD----------TGNT 290
Query: 419 GGFGGVPQGPNYANIQTTGVQRRM-RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
P P +++ + + + R + ++G +IGK G T+K++R+ SG++I + D
Sbjct: 291 WPLYSSPL-PVVSSLGASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDD 349
Query: 478 S-STPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQC 536
S + + + I + +S S+ + + + N + + + +RL+VP+
Sbjct: 350 SKARHDECLITITATESTSDLKSVAVEAVLLLQEKIN-----DEDDAPVSIRLLVPSKVI 404
Query: 537 GSIIGKGGSQIKTIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIM 593
G IIG+ G+ I IR+ + A + ++ P + + V + G D V A+ QI L +
Sbjct: 405 GCIIGRSGAIINEIRKRTKADIQISRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRL 464
Query: 594 VDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG 653
+ K I + ++ G L + +S++ AP M ++ A AL +G
Sbjct: 465 REDVLKNKDIDHN---RHIGSESLYAS-----SSVLSAPPMLSSIPATAPALAYDQRTGS 516
Query: 654 GMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTV 713
G G G++++ + + M N + + + N +G ++ T EM V
Sbjct: 517 GTGLGMHSSR----SHYGYDSYSMEDNGYGSMSSYATNLYEG-----HRLPPLSTLEMVV 567
Query: 714 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
P +G V+GKGG + IRKISGA + IS+S DR ++GT + A+ LI
Sbjct: 568 PANAVGKVMGKGGANLANIRKISGATVEISESKSYR---GDRVALISGTSEEKRAAENLI 624
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 155/328 (47%), Gaps = 29/328 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS-STPERIVTVIGSMDSLFRAFSLITKNIEEF 63
++G +IGK G T+K++R+ SG++I + DS + + + I + +S S+ + +
Sbjct: 322 KIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITATESTSDLKSVAVEAVLLL 381
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP-- 121
+ N + + + +RL+VP+ G IIG+ G+ I IR+ + A + ++ P
Sbjct: 382 QEKIN-----DEDDAPVSIRLLVPSKVIGCIIGRSGAIINEIRKRTKADIQISRSNKPKY 436
Query: 122 -NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
+ + V + G D V A+ QI L + + K I + ++ G L +
Sbjct: 437 ADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNKDIDHN---RHIGSESLYAS----- 488
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ 240
+S++ AP M ++ A AL +G G G G++++ + + M N +
Sbjct: 489 SSVLSAPPMLSSIPATAPALAYDQRTGSGTGLGMHSSR----SHYGYDSYSMEDNGYGSM 544
Query: 241 NQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
+ + N +G ++ T EM VP +G V+GKGG + IRKISGA + IS+S
Sbjct: 545 SSYATNLYEG-----HRLPPLSTLEMVVPANAVGKVMGKGGANLANIRKISGATVEISES 599
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLI 328
DR ++GT + A+ LI
Sbjct: 600 KSYR---GDRVALISGTSEEKRAAENLI 624
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 140/610 (22%), Positives = 250/610 (40%), Gaps = 144/610 (23%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVI-------------------- 43
+GS+IGK+G+ + +R+ES +K+ + D R++T+
Sbjct: 53 IGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNKEEIEIEDEFDNEKP 112
Query: 44 --GSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
+ D+L + S I+ +IE ++ K + + +++VP+SQ +IGK G+
Sbjct: 113 LCAAQDALIKVHSAISNSIETAGDSEKKRKNKD------ECQILVPSSQSAILIGKAGAT 166
Query: 102 IKTIRETSGASVYV----ASDMLPNSTEREVN---IKGVPDAVTQAIYQICLIMVDSPPK 154
IK +R + ++ V A+D +S E + + G +AV +A++ + IM PK
Sbjct: 167 IKQLRVKTRTNIKVVPKDAADP-EHSCAMEFDNFVLVGESEAVKRALFAVSTIMYKFSPK 225
Query: 155 -----GATIPYRP--------LP---------------QNAGGPGLIGNQFGMQNSLMGA 186
T+P P LP Q P LIG MQ+ G
Sbjct: 226 EDIPLDTTVPETPHSIIIPSELPIYPPGGLYPASDPIVQPRSFPQLIGAT-TMQDLHGGY 284
Query: 187 PDMGN------NPLAGLAALGLGGNS-------------------GGGMGGGLNAAALAA 221
D GN +PL +++LG + GGG + A+ A
Sbjct: 285 ADTGNTWPLYSSPLPVVSSLGASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGAR 344
Query: 222 LASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKE--------MTVPNELI 273
+ K H + + + + Q +I E + VP+++I
Sbjct: 345 IEVDDSKARHDECLITITATESTSDLKSVAVEAVLLLQEKINDEDDAPVSIRLLVPSKVI 404
Query: 274 GAVIGKGGTKIFEIRKISGAMIRISKSSE-EEEDSNDRTITMTGTPDAI--ALAQYLINM 330
G +IG+ G I EIRK + A I+IS+S++ + D ND + + G D + AL Q ++ +
Sbjct: 405 GCIIGRSGAIINEIRKRTKADIQISRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRL 464
Query: 331 SVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGAL 390
++L+ D + ++ S + L AS+ + +A P L+ I P
Sbjct: 465 REDVLKNK------------DIDHNRHIGSES----LYASSSVLSAPPMLSSI---PATA 505
Query: 391 NALTSLSALGGLSDLLGGGSSGGGSG------NSGGFGGVPQGPNYANIQTTGVQ----R 440
AL G + LG SS G G+G + +YA G +
Sbjct: 506 PALAYDQRTGSGTG-LGMHSSRSHYGYDSYSMEDNGYGSM---SSYATNLYEGHRLPPLS 561
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP--ERIVTVIGS------MD 492
+ ++ VG ++GK G + +R+ SG+ + IS+S + +R+ + G+ +
Sbjct: 562 TLEMVVPANAVGKVMGKGGANLANIRKISGATVEISESKSYRGDRVALISGTSEEKRAAE 621
Query: 493 SLFRAFSLIT 502
+L +AF + T
Sbjct: 622 NLIQAFIMAT 631
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 195/468 (41%), Gaps = 109/468 (23%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVI-------------------- 488
+GS+IGK+G+ + +R+ES +K+ + D R++T+
Sbjct: 53 IGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNKEEIEIEDEFDNEKP 112
Query: 489 --GSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
+ D+L + S I+ +IE ++ K + + +++VP+SQ +IGK G+
Sbjct: 113 LCAAQDALIKVHSAISNSIETAGDSEKKRKNKD------ECQILVPSSQSAILIGKAGAT 166
Query: 547 IKTIRETSGASVYV----ASDMLPNSTEREVN---IKGVPDAVTQAIYQICLIMVDSPPK 599
IK +R + ++ V A+D +S E + + G +AV +A++ + IM PK
Sbjct: 167 IKQLRVKTRTNIKVVPKDAADP-EHSCAMEFDNFVLVGESEAVKRALFAVSTIMYKFSPK 225
Query: 600 -----GATIPYRP--------LP---------------QNAGGPGLIGNQFGMQNSLMGA 631
T+P P LP Q P LIG MQ+ G
Sbjct: 226 EDIPLDTTVPETPHSIIIPSELPIYPPGGLYPASDPIVQPRSFPQLIGAT-TMQDLHGGY 284
Query: 632 PDMGN------NPLAGLAALGLGGNS-------------------GGGMGGGLNAAALAA 666
D GN +PL +++LG + GGG + A+ A
Sbjct: 285 ADTGNTWPLYSSPLPVVSSLGASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGAR 344
Query: 667 LASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKE--------MTVPNELI 718
+ K H + + + + Q +I E + VP+++I
Sbjct: 345 IEVDDSKARHDECLITITATESTSDLKSVAVEAVLLLQEKINDEDDAPVSIRLLVPSKVI 404
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSE-EEEDSNDRTITMTGTPDAI--ALAQYLINM 775
G +IG+ G I EIRK + A I+IS+S++ + D ND + + G D + AL Q ++ +
Sbjct: 405 GCIIGRSGAIINEIRKRTKADIQISRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRL 464
Query: 776 SVELLR---ANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAA 820
++L+ + N G ES ++S + L + L+ + A+ P A
Sbjct: 465 REDVLKNKDIDHNRHIGSESL---YASSSVLSAPPMLSSIPATAPALA 509
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 65 KNQNKHLGGNGES---QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
KNQ + + E +LI R++ P GS+IGK G I +IR+ S A V V D P
Sbjct: 24 KNQKRRVNDRDERDKGELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVV-DPFP 82
Query: 122 NSTEREVNI 130
+ R + I
Sbjct: 83 GAKHRVITI 91
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 510 KNQNKHLGGNGES---QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
KNQ + + E +LI R++ P GS+IGK G I +IR+ S A V V D P
Sbjct: 24 KNQKRRVNDRDERDKGELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVV-DPFP 82
Query: 567 NSTEREVNI 575
+ R + I
Sbjct: 83 GAKHRVITI 91
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Query: 235 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
N+NQ + ++R+ RD + I + PNE+IG+VIGK G I IR+ S A
Sbjct: 23 NKNQKRRVNDRDERD--------KGELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAK 74
Query: 295 IRI 297
+++
Sbjct: 75 VKV 77
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Query: 680 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 739
N+NQ + ++R+ RD + I + PNE+IG+VIGK G I IR+ S A
Sbjct: 23 NKNQKRRVNDRDERD--------KGELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAK 74
Query: 740 IRI 742
+++
Sbjct: 75 VKV 77
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 40/334 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI- 60
GSIIGK G+ + L+ +S ++I +S ++ T ER++ + GS+ + + I + +
Sbjct: 34 GSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITGSIAGVRQVNRFILEKVS 93
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE ++ G +++ QL++IVP + G IIGKGGS IK I++ SGA V V+
Sbjct: 94 EEGKADKAIQYGVLDKNRNRQLKMIVPNAAAGVIIGKGGSNIKEIQDKSGAHVQVSQKKA 153
Query: 121 PNST-EREVNIKGVPD---AVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 176
+ ER + + G + + I CL +++ P ++ Y + P L N
Sbjct: 154 QYAIDERILTVTGEFNERLTAWELIIWKCLEDINNLP-NTSVSYSHVEPAGTLPALHSNY 212
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+G N+ + P+ AA + + +Q+ + Q
Sbjct: 213 YGGGNA-------NDRPMDSSAA-------------SYDPYTSERYSPTQVTQDAQADRQ 252
Query: 237 N--QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
Q+ RNNR PS + ++ VP+ +IGA++GK G I +I+ ISGA
Sbjct: 253 YGMQSYPPTARNNR--PS-----SYGETVIKIPVPDSIIGAILGKRGKVISDIQNISGAH 305
Query: 295 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
I++S+ + + DR +T+TGT DA A LI
Sbjct: 306 IQVSQRGDYIPGTKDREVTVTGTNDAAHYADKLI 339
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 40/334 (11%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI- 505
GSIIGK G+ + L+ +S ++I +S ++ T ER++ + GS+ + + I + +
Sbjct: 34 GSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITGSIAGVRQVNRFILEKVS 93
Query: 506 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 565
EE ++ G +++ QL++IVP + G IIGKGGS IK I++ SGA V V+
Sbjct: 94 EEGKADKAIQYGVLDKNRNRQLKMIVPNAAAGVIIGKGGSNIKEIQDKSGAHVQVSQKKA 153
Query: 566 PNST-EREVNIKGVPD---AVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
+ ER + + G + + I CL +++ P ++ Y + P L N
Sbjct: 154 QYAIDERILTVTGEFNERLTAWELIIWKCLEDINNLP-NTSVSYSHVEPAGTLPALHSNY 212
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 681
+G N+ + P+ AA + + +Q+ + Q
Sbjct: 213 YGGGNA-------NDRPMDSSAA-------------SYDPYTSERYSPTQVTQDAQADRQ 252
Query: 682 N--QNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 739
Q+ RNNR PS + ++ VP+ +IGA++GK G I +I+ ISGA
Sbjct: 253 YGMQSYPPTARNNR--PS-----SYGETVIKIPVPDSIIGAILGKRGKVISDIQNISGAH 305
Query: 740 IRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
I++S+ + + DR +T+TGT DA A LI
Sbjct: 306 IQVSQRGDYIPGTKDREVTVTGTNDAAHYADKLI 339
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGSMDSLF 495
R+++ I+ G IIGK G +K+++++SG+ + +S + ERI+TV G +
Sbjct: 113 RQLKMIVPNAAAGVIIGKGGSNIKEIQDKSGAHVQVSQKKAQYAIDERILTVTGEFNERL 172
Query: 496 RAFSLI 501
A+ LI
Sbjct: 173 TAWELI 178
>gi|393218460|gb|EJD03948.1| hypothetical protein FOMMEDRAFT_140050 [Fomitiporia mediterranea
MF3/22]
Length = 347
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK G+ V LR+E+G K +S ER++TV G ++ + +A+
Sbjct: 39 LRALVSTKDAGVIIGKGGKNVADLRDETGVKAGVSKVVPGVHERVLTVSGDVEKVAKAYR 98
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI I + +RL++ + G+IIG+GG +IK I++ SGA +
Sbjct: 99 LI---IAQLIDASPPSPTTTSPPSNTSIRLLISHNLMGTIIGRGGLKIKAIQDASGARMV 155
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPG 616
+ DMLP STER V ++G DA+ AI QI +++ +G T+ + P P + G
Sbjct: 156 ASKDMLPQSTERIVEVQGSADAIGLAIEQIGKCLLEDWERGQGTVLFHPGPSSDASAG 213
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK G+ V LR+E+G K +S ER++TV G ++ + +A+ LI I
Sbjct: 46 KDAGVIIGKGGKNVADLRDETGVKAGVSKVVPGVHERVLTVSGDVEKVAKAYRLI---IA 102
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ +RL++ + G+IIG+GG +IK I++ SGA + + DMLP
Sbjct: 103 QLIDASPPSPTTTSPPSNTSIRLLISHNLMGTIIGRGGLKIKAIQDASGARMVASKDMLP 162
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPG 171
STER V ++G DA+ AI QI +++ +G T+ + P P + G
Sbjct: 163 QSTERIVEVQGSADAIGLAIEQIGKCLLEDWERGQGTVLFHPGPSSDASAG 213
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
N T+ +++P++++G +IG+GGTKI EIR++SG+ I I+K+ +E + +R T+ GTP
Sbjct: 259 NLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKTPHDE--TGERMFTIVGTPQ 316
Query: 320 AIALAQYLINMSVE 333
A A +L+ +E
Sbjct: 317 ANEKALFLLYNQLE 330
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
N T+ +++P++++G +IG+GGTKI EIR++SG+ I I+K+ +E + +R T+ GTP
Sbjct: 259 NLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKTPHDE--TGERMFTIVGTPQ 316
Query: 765 AIALAQYLINMSVE 778
A A +L+ +E
Sbjct: 317 ANEKALFLLYNQLE 330
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 55/201 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ +G+IIG+ G +K +++ SG+++ S P ERIV V GS D++ A
Sbjct: 123 IRLLISHNLMGTIIGRGGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGSADAIGLAI 182
Query: 499 SLITKNIEE----------FH---------------------------KNQNKHLGGNGE 521
I K + E FH N ++ GG+
Sbjct: 183 EQIGKCLLEDWERGQGTVLFHPGPSSDASAGRRSANGYSSASFTSSRRTNGDRARGGSPP 242
Query: 522 ---------------SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+ L + +P+ G IIG+GG++I IR SG+ + +A
Sbjct: 243 PTPPQSLPPSSPQQSANLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKTPHD 302
Query: 567 NSTEREVNIKGVPDAVTQAIY 587
+ ER I G P A +A++
Sbjct: 303 ETGERMFTIVGTPQANEKALF 323
Score = 47.0 bits (110), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 55/192 (28%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
+G+IIG+ G +K +++ SG+++ S P ERIV V GS D++ A I K + E
Sbjct: 132 MGTIIGRGGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGSADAIGLAIEQIGKCLLE 191
Query: 63 ----------FH---------------------------KNQNKHLGGNGE--------- 76
FH N ++ GG+
Sbjct: 192 DWERGQGTVLFHPGPSSDASAGRRSANGYSSASFTSSRRTNGDRARGGSPPPTPPQSLPP 251
Query: 77 ------SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
+ L + +P+ G IIG+GG++I IR SG+ + +A + ER I
Sbjct: 252 SSPQQSANLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKTPHDETGERMFTI 311
Query: 131 KGVPDAVTQAIY 142
G P A +A++
Sbjct: 312 VGTPQANEKALF 323
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 53/251 (21%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ + + L+G +IG+GG KI I+ SGA R+ S + S +R + + G+ DA
Sbjct: 124 RLLISHNLMGTIIGRGGLKIKAIQDASGA--RMVASKDMLPQSTERIVEVQGSADA---- 177
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNL------PSSAPLAGLNASNPLAAALP 378
I +++E + G+ ++D+ PSS AG ++N ++A
Sbjct: 178 ---IGLAIEQI---------GKCLLEDWERGQGTVLFHPGPSSDASAGRRSANGYSSA-- 223
Query: 379 QLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGV 438
+ TS G D GGS S AN++T +
Sbjct: 224 -------------SFTSSRRTNG--DRARGGSPPPTPPQSLP---PSSPQQSANLRTQNI 265
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLF 495
+ VG IIG+ G + ++R SGSKI I+ + T ER+ T++G+ +
Sbjct: 266 S------IPSDMVGCIIGRGGTKITEIRRLSGSKISIAKTPHDETGERMFTIVGTPQANE 319
Query: 496 RAFSLITKNIE 506
+A L+ +E
Sbjct: 320 KALFLLYNQLE 330
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 148/340 (43%), Gaps = 62/340 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
+R ++ GS+IGK G T+ + +SG++I +S + T +RI+ V G+++ + R
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQR 97
Query: 497 AFSLI-TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
A LI +K + E H + N ++RL+VP CG IIGKGG+ I++ E S
Sbjct: 98 AVELILSKLLSELHSEDD-----NDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQ 152
Query: 556 ASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
A + ++ + +R V + G D +AI I + + P ++
Sbjct: 153 AGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSM---------- 202
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
N+P + + G G L + A A + +
Sbjct: 203 ----------------------NSPFS-YPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYR 239
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N + QN + ++ N +T M V +E IG V+G+GG I EI
Sbjct: 240 PNGAAGGKLQNSKE--------------ERSNSLT--MGVADEHIGLVVGRGGRNIMEIS 283
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+ SGA I+IS + + DR +T+TG+ AI A+ +I
Sbjct: 284 QASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMI 323
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 62/330 (18%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLI-TKNI 60
GS+IGK G T+ + +SG++I +S + T +RI+ V G+++ + RA LI +K +
Sbjct: 48 GSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLL 107
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SD 118
E H + N ++RL+VP CG IIGKGG+ I++ E S A + ++ +
Sbjct: 108 SELHSEDD-----NDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDN 162
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
+R V + G D +AI I + + P ++
Sbjct: 163 NYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSM-------------------- 202
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
N+P + + G G L + A A + + N + Q
Sbjct: 203 ------------NSPFS-YPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQ 249
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
N + ++ N +T M V +E IG V+G+GG I EI + SGA I+IS
Sbjct: 250 NSKE--------------ERSNSLT--MGVADEHIGLVVGRGGRNIMEISQASGARIKIS 293
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+ + DR +T+TG+ AI A+ +I
Sbjct: 294 DRGDYVSGTTDRKVTITGSQRAIRTAESMI 323
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 52/261 (19%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S+ N + + + VPN G +IGKGG I + S A I+IS NDR
Sbjct: 112 SEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRL 171
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN 371
+T+TG+ D A +EL+ + L S ++ N P S P +
Sbjct: 172 VTLTGSFDEQMRA-------IELIVSKL-------SEDPHYAQSMNSPFSYPGVYFSGYQ 217
Query: 372 --PLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPN 429
P LP +A P A NA+ + G++GG NS
Sbjct: 218 GVPYTYVLPSVA-----PPAYNAV----------NYRPNGAAGGKLQNS--------KEE 254
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPERI 484
+N T GV + +G ++G+ G + ++ + SG++I ISD S T +R
Sbjct: 255 RSNSLTMGV--------ADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRK 306
Query: 485 VTVIGSMDSLFRAFSLITKNI 505
VT+ GS ++ A S+I + +
Sbjct: 307 VTITGSQRAIRTAESMILQKV 327
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDMLPNSTEREVNIK 131
+ E + +R +V S GS+IGKGGS I + SGA + ++ + P +T+R + +
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 89
Query: 132 GVPDAVTQAI 141
G + + +A+
Sbjct: 90 GAINEIQRAV 99
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDMLPNSTEREVNIK 576
+ E + +R +V S GS+IGKGGS I + SGA + ++ + P +T+R + +
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 89
Query: 577 GVPDAVTQAI 586
G + + +A+
Sbjct: 90 GAINEIQRAV 99
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
PS + ++ I V N G+VIGKGG+ I + + SGA I++S++ E + DR
Sbjct: 27 PSLDSEEKPTYI--RFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDR 84
Query: 311 TITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMD 350
I ++G + I A VEL+ + L E E + D
Sbjct: 85 IIMVSGAINEIQRA-------VELILSKLLSELHSEDDND 117
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
PS + ++ I V N G+VIGKGG+ I + + SGA I++S++ E + DR
Sbjct: 27 PSLDSEEKPTYI--RFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDR 84
Query: 756 TITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMD 795
I ++G + I A VEL+ + L E E + D
Sbjct: 85 IIMVSGAINEIQRA-------VELILSKLLSELHSEDDND 117
>gi|402587695|gb|EJW81630.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 273
Score = 91.7 bits (226), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/302 (26%), Positives = 139/302 (46%), Gaps = 38/302 (12%)
Query: 36 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSII 95
P R++T+ + +++ I ++E + + + +++++V S G++I
Sbjct: 2 PFRVLTLTATTENIANCLREIIPRLDENRDDDHDRRMKKTDRCDSEMKVLVHESHAGAVI 61
Query: 96 GKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG 155
G+GGS+IK +RE +GA + V S P STER V + G + + I I ++ + P KG
Sbjct: 62 GRGGSRIKELREKTGAQLKVFSRCAPQSTERIVLLNGEVEKIIDCINIIIDVLKEIPIKG 121
Query: 156 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 215
PY P+ + P +I + G PD ++ +G G + G
Sbjct: 122 PVRPYDPMYYD---PDIISDYGGY------VPDRNF-----ISRVGRGRDFG-------- 159
Query: 216 AAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGA 275
SS + + P ++ + R P T ++T+P+EL GA
Sbjct: 160 -------FSSGIIPSRYPGRDDRYGGMRDMMGRYSPIPAMQ------TTQVTIPDELGGA 206
Query: 276 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELL 335
+IGKGG++I +R+ SGA I + ++ DR IT++GT + I AQYL+ V
Sbjct: 207 IIGKGGSRINRVREESGAQIEVEP---HRDNGGDRIITISGTREQIQAAQYLLQQCVRTS 263
Query: 336 RA 337
A
Sbjct: 264 EA 265
Score = 91.7 bits (226), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/302 (26%), Positives = 139/302 (46%), Gaps = 38/302 (12%)
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSII 540
P R++T+ + +++ I ++E + + + +++++V S G++I
Sbjct: 2 PFRVLTLTATTENIANCLREIIPRLDENRDDDHDRRMKKTDRCDSEMKVLVHESHAGAVI 61
Query: 541 GKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG 600
G+GGS+IK +RE +GA + V S P STER V + G + + I I ++ + P KG
Sbjct: 62 GRGGSRIKELREKTGAQLKVFSRCAPQSTERIVLLNGEVEKIIDCINIIIDVLKEIPIKG 121
Query: 601 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 660
PY P+ + P +I + G PD ++ +G G + G
Sbjct: 122 PVRPYDPMYYD---PDIISDYGGY------VPDRNF-----ISRVGRGRDFG-------- 159
Query: 661 AAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGA 720
SS + + P ++ + R P T ++T+P+EL GA
Sbjct: 160 -------FSSGIIPSRYPGRDDRYGGMRDMMGRYSPIPAMQ------TTQVTIPDELGGA 206
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELL 780
+IGKGG++I +R+ SGA I + ++ DR IT++GT + I AQYL+ V
Sbjct: 207 IIGKGGSRINRVREESGAQIEVEP---HRDNGGDRIITISGTREQIQAAQYLLQQCVRTS 263
Query: 781 RA 782
A
Sbjct: 264 EA 265
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 154/379 (40%), Gaps = 93/379 (24%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VG+IIG+ GE +KK+ EE+ ++I I D PER V +
Sbjct: 123 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSP 182
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD L R IT + + + G G + RL+VP+SQ GS+IGK G+ IK+
Sbjct: 183 AMDGLLRVHKRITDSSDGESSQPQRSAGNIGPT-----RLLVPSSQAGSLIGKQGATIKS 237
Query: 550 IRETSGASVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQI------------CLIMVD 595
I+++S + V + ++ P + +R V I+G P V +A+ I L + +
Sbjct: 238 IQDSSKSIVRIVENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRKFLVDRSVLPLFE 297
Query: 596 SPPKGATIPYR---PLPQNAGGPGLI---------------GNQF---GMQNSLMGAPDM 634
+ K +P P PQ+ G P QF Q+S PD+
Sbjct: 298 AHMKMHGMPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMPPRPQDSYYPPPDV 357
Query: 635 GNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRD 694
P G++A G G G
Sbjct: 358 EKQPHYGISAYGREAPPSGASATG------------------------------------ 381
Query: 695 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 754
+Q + +Q+ +M +P AVIG G I IR+ SGA + I +S D
Sbjct: 382 --NQPPSHAGSQVAHDMHIPLAYADAVIGAAGASISYIRRHSGATVTIQESRGA---PGD 436
Query: 755 RTITMTGTPDAIALAQYLI 773
T+ +TGT + AQ LI
Sbjct: 437 MTVEITGTAAQVQTAQQLI 455
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 151/372 (40%), Gaps = 93/372 (25%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLFR 51
++VG+IIG+ GE +KK+ EE+ ++I I D PER V + +MD L R
Sbjct: 130 QKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSPAMDGLLR 189
Query: 52 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
IT + + + G G + RL+VP+SQ GS+IGK G+ IK+I+++S +
Sbjct: 190 VHKRITDSSDGESSQPQRSAGNIGPT-----RLLVPSSQAGSLIGKQGATIKSIQDSSKS 244
Query: 112 SVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQI------------CLIMVDSPPKGAT 157
V + ++ P + +R V I+G P V +A+ I L + ++ K
Sbjct: 245 IVRIVENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRKFLVDRSVLPLFEAHMKMHG 304
Query: 158 IPYR---PLPQNAGGPGLI---------------GNQF---GMQNSLMGAPDMGNNPLAG 196
+P P PQ+ G P QF Q+S PD+ P G
Sbjct: 305 MPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMPPRPQDSYYPPPDVEKQPHYG 364
Query: 197 LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTN 256
++A G G G +Q +
Sbjct: 365 ISAYGREAPPSGASATG--------------------------------------NQPPS 386
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
+Q+ +M +P AVIG G I IR+ SGA + I +S D T+ +TG
Sbjct: 387 HAGSQVAHDMHIPLAYADAVIGAAGASISYIRRHSGATVTIQESRGA---PGDMTVEITG 443
Query: 317 TPDAIALAQYLI 328
T + AQ LI
Sbjct: 444 TAAQVQTAQQLI 455
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 132/558 (23%), Positives = 225/558 (40%), Gaps = 113/558 (20%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEE---EEDSNDRTITMTGTPDAIALAQYLIN 329
+G V+GKGG + +R+ GA IR+ ++ E+ D I ++G+ + A ++
Sbjct: 120 VGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVS 179
Query: 330 MSVELLRANLNGEGGGESNMDDFSSD-NNLPSSAPLAGLNASNPLAAALPQLAQILTKPG 388
++ D+ D +N+P P GL S G
Sbjct: 180 TCLQ----------------DNPRPDTHNIPIGRPF-GLPGSGT---------------G 207
Query: 389 ALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQG 448
+ S L + + N+G P GP + Q R I+
Sbjct: 208 CPPGMDPHSQRSYLPPHIPDYHTRNYPSNAG-----PPGPRFFFEQEI----VFRMIILN 258
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMDSLFR 496
+ VGSIIGK G T++ L+ E+G+ I I + + + ER+V + + D++ R
Sbjct: 259 EMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSDMLHSPAQDAVVR 318
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
+S I+ E +++ H RL+VP+ G ++GKGGS I +R+ +GA
Sbjct: 319 VYSRIS----EASIDRSSHTPA---------RLLVPSQHIGCLLGKGGSIISEMRKITGA 365
Query: 557 SVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSPPKGATIPYRP 607
++ + ++ +P +R V + G ++ A+ I +I+ P G PY P
Sbjct: 366 NIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPP 425
Query: 608 -----------------LPQNAGGPGLIGNQFGMQNSLMGAPDMGNN---PLAGLAALG- 646
L + G P + F ++ MG +MG++ P+ + +G
Sbjct: 426 VGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPF-RPDAPMGHFEMGDHRPPPVHSMEYMGA 484
Query: 647 -----LGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQNQNQHNRNNRDGPSQKT 700
L G GG L + +TN +PRN + + R GP
Sbjct: 485 DRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRNMSDAVPA--TDFRKGPVAIE 542
Query: 701 NQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 759
NQ T E+ +P IG V G G++I EI K+SGA I + + +S + +
Sbjct: 543 NQVATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKAGDANSK---VVI 599
Query: 760 TGTPDAIALAQYLINMSV 777
G P+ AQ LI+ +
Sbjct: 600 CGDPEETKKAQSLIHAFI 617
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 163/376 (43%), Gaps = 68/376 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMDSLFRAF 53
VGSIIGK G T++ L+ E+G+ I I + + + ER+V + + D++ R +
Sbjct: 261 VGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSDMLHSPAQDAVVRVY 320
Query: 54 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
S I+ E +++ H RL+VP+ G ++GKGGS I +R+ +GA++
Sbjct: 321 SRIS----EASIDRSSHTPA---------RLLVPSQHIGCLLGKGGSIISEMRKITGANI 367
Query: 114 YV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSPPKGATIPYRP-- 162
+ ++ +P +R V + G ++ A+ I +I+ P G PY P
Sbjct: 368 RIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVG 427
Query: 163 ---------------LPQNAGGPGLIGNQFGMQNSLMGAPDMGNN---PLAGLAALG--- 201
L + G P + F ++ MG +MG++ P+ + +G
Sbjct: 428 NIPVHQSRQEQPPPHLHPSGGMPPYPMHPF-RPDAPMGHFEMGDHRPPPVHSMEYMGADR 486
Query: 202 ---LGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQNQNQHNRNNRDGPSQKTNQ 257
L G GG L + +TN +PRN + + R GP NQ
Sbjct: 487 MPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRNMSDAVPA--TDFRKGPVAIENQ 544
Query: 258 QQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
T E+ +P IG V G G++I EI K+SGA I + + +S + + G
Sbjct: 545 VATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKAGDANSK---VVICG 601
Query: 317 TPDAIALAQYLINMSV 332
P+ AQ LI+ +
Sbjct: 602 DPEETKKAQSLIHAFI 617
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 64/261 (24%)
Query: 68 NKHLGGNGESQLIQ----LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLP 121
++ +GG E + + R++ Q G ++GKGG ++ +R+ GA + V + LP
Sbjct: 93 DEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLP 152
Query: 122 NST---EREVNIKGVPDAVTQAIYQICLIMVDSP-PKGATIPYRPLPQNAGGPGLIGNQF 177
+ ++I G V +A+ + + D+P P IP IG F
Sbjct: 153 PWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIP-------------IGRPF 199
Query: 178 GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
G+ S G P G +P + + L H+P
Sbjct: 200 GLPGSGTGCPP-GMDPHSQRSYL----------------------------PPHIP---- 226
Query: 238 QNQNQHNRN--NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+ H RN + GP + +I M + NE++G++IGKGG+ I ++ +GA I
Sbjct: 227 ---DYHTRNYPSNAGPPGPRFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACI 283
Query: 296 RISKSSEEEEDSNDRTITMTG 316
+I E DS++R + +T
Sbjct: 284 KI---LEPVADSDERVVAITA 301
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 63/346 (18%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
+R ++ GS+IGK G T+ + + +SG++I +S + T +RI+ + GS+ +
Sbjct: 36 HIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVI 95
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
LI +++ H + G E + ++RL+VP S CG IIGKGG+ IK+ E S
Sbjct: 96 NGLELI---LDKLHSELHAEDGNEVEPRR-RIRLVVPNSSCGGIIGKGGATIKSFIEESK 151
Query: 556 ASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
A + ++ + ++R V + G + +AI I + + QN
Sbjct: 152 AGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDD---------HYSQNVH 202
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
P AGL G G A AL ++A++
Sbjct: 203 SP---------------------YSYAGLFYSGFHGPP--------YAYALPSVATAGYN 233
Query: 674 T-NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
+ N+ P N G + ++ + T + V +E IG V+G+GG I EI
Sbjct: 234 SVNYAP-------------NGSGGKYQNHKDEASTTVTIGVADEHIGLVLGRGGRNIMEI 280
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
+I+GA I+IS + + DR +++TG AI A+ +I V+
Sbjct: 281 TQITGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVD 326
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 148/335 (44%), Gaps = 63/335 (18%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GS+IGK G T+ + + +SG++I +S + T +RI+ + GS+ + LI ++
Sbjct: 47 GSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVINGLELI---LD 103
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDM 119
+ H + G E + ++RL+VP S CG IIGKGG+ IK+ E S A + ++ +
Sbjct: 104 KLHSELHAEDGNEVEPRR-RIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNT 162
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
++R V + G + +AI I + + QN P
Sbjct: 163 FYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDD---------HYSQNVHSP--------- 204
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT-NHMPRNQNQ 238
AGL G G A AL ++A++ + N+ P
Sbjct: 205 ------------YSYAGLFYSGFHGPP--------YAYALPSVATAGYNSVNYAP----- 239
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
N G + ++ + T + V +E IG V+G+GG I EI +I+GA I+IS
Sbjct: 240 --------NGSGGKYQNHKDEASTTVTIGVADEHIGLVLGRGGRNIMEITQITGARIKIS 291
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+ + DR +++TG AI A+ +I V+
Sbjct: 292 DRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVD 326
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 52/215 (24%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSST---PERIVTVIGSMDS 493
+RR+R ++ G IIGK G T+K EES + I IS D++ +R+VT+ G+ +
Sbjct: 120 RRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEE 179
Query: 494 LFRAFSLI-TKNIEEFHKNQNKHL------------------------------------ 516
RA LI K E+ H +QN H
Sbjct: 180 QMRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAP 239
Query: 517 -GGNGESQ------LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPN 567
G G+ Q + + V G ++G+GG I I + +GA + ++ D +
Sbjct: 240 NGSGGKYQNHKDEASTTVTIGVADEHIGLVLGRGGRNIMEITQITGARIKISDRGDFMSG 299
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 602
+T+R+V+I G A+ QA I VDS + AT
Sbjct: 300 TTDRKVSITGPQRAIQQAETMIKQ-KVDSATERAT 333
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 81/262 (30%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ VPN G +IGKGG I + S A I+IS +DR +T++GT + A
Sbjct: 125 LVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRA- 183
Query: 326 YLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN----PLAAALPQLA 381
++L+ A L + D +S + + P S AGL S P A ALP +A
Sbjct: 184 ------IDLILAKLTED-------DHYSQNVHSPYS--YAGLFYSGFHGPPYAYALPSVA 228
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPN-----YANIQ-- 434
+ G+ V PN Y N +
Sbjct: 229 ------------------------------------TAGYNSVNYAPNGSGGKYQNHKDE 252
Query: 435 -----TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPERI 484
T GV + +G ++G+ G + ++ + +G++I ISD S T +R
Sbjct: 253 ASTTVTIGV--------ADEHIGLVLGRGGRNIMEITQITGARIKISDRGDFMSGTTDRK 304
Query: 485 VTVIGSMDSLFRAFSLITKNIE 506
V++ G ++ +A ++I + ++
Sbjct: 305 VSITGPQRAIQQAETMIKQKVD 326
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
V N G+VIGKGG+ I E + SGA I++S++ E + DR I ++G+ + L
Sbjct: 41 VSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVINGLEL 100
Query: 328 INMSVELLRANLNGEGGGE 346
I ++ L + L+ E G E
Sbjct: 101 I---LDKLHSELHAEDGNE 116
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 772
V N G+VIGKGG+ I E + SGA I++S++ E + DR I ++G+ + L
Sbjct: 41 VSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVINGLEL 100
Query: 773 INMSVELLRANLNGEGGGE 791
I ++ L + L+ E G E
Sbjct: 101 I---LDKLHSELHAEDGNE 116
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 25/133 (18%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ VPN G +IGKGG I + S A I+IS +DR +T++GT + A
Sbjct: 125 LVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRA- 183
Query: 771 YLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN----PLAAALPQLA 826
++L+ A L + D +S + + P S AGL S P A ALP +A
Sbjct: 184 ------IDLILAKLTED-------DHYSQNVHSPYS--YAGLFYSGFHGPPYAYALPSVA 228
Query: 827 QILTKPAGLNASN 839
AG N+ N
Sbjct: 229 T-----AGYNSVN 236
>gi|50311087|ref|XP_455567.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644703|emb|CAG98275.1| KLLA0F10703p [Kluyveromyces lactis]
Length = 417
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 168/368 (45%), Gaps = 42/368 (11%)
Query: 426 QGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPER 483
Q PNY N+ RM +M K+ ++G GE V +++ E+ ++I +SD+ ER
Sbjct: 62 QVPNYINL-------RMLCLM--KQASKVVGGKGERVNRIKSETNTRINVSDNINGVMER 112
Query: 484 IVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
++ V G + + RAF I + I N N S + + L++P G IIG+
Sbjct: 113 VIFVRGKCEEVARAFGKIVRAI-----NNESDDDSNERSLPLVVNLLIPHHFMGCIIGRQ 167
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK---G 600
GS++ I + S A + + LP S +R +++ GV DA+ A Y I ++++ K
Sbjct: 168 GSRLHEIEDLSAARLMASPQQLPMSNDRILSLTGVADAIHIATYYIGQTILENESKLKNK 227
Query: 601 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG-L 659
++ Y P P ++ ++ N + M G + + A + M +
Sbjct: 228 KSVFYHPGPMHS----VLVNNYQMYMIYSGGAPTNPQDITPMVAPHQEHHQYHPMDKKTM 283
Query: 660 NAAALAALASSQL--KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVP--- 714
N ++ + + + P + +H + + QQ+ I+ + +P
Sbjct: 284 NRRTKPPVSKYPIGPQQSLQPYTDMVDSCKHVK-------IISQLQQSPISPHLVLPQEV 336
Query: 715 ---NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 771
N+ +G VIGKGG I +I++ +G MI+I ++ E ++R + + GTP A A
Sbjct: 337 FIDNKFVGNVIGKGGKNIQQIKQSTGCMIKI---NDPVEGLDERKLVLIGTPLATQTAIM 393
Query: 772 LINMSVEL 779
+IN +++
Sbjct: 394 MINNRIDM 401
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 158/345 (45%), Gaps = 33/345 (9%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ ++G GE V +++ E+ ++I +SD+ ER++ V G + + RAF I + I
Sbjct: 76 KQASKVVGGKGERVNRIKSETNTRINVSDNINGVMERVIFVRGKCEEVARAFGKIVRAI- 134
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
N N S + + L++P G IIG+ GS++ I + S A + + LP
Sbjct: 135 ----NNESDDDSNERSLPLVVNLLIPHHFMGCIIGRQGSRLHEIEDLSAARLMASPQQLP 190
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK---GATIPYRPLPQNAGGPGLIGNQFG 178
S +R +++ GV DA+ A Y I ++++ K ++ Y P P ++ ++ N +
Sbjct: 191 MSNDRILSLTGVADAIHIATYYIGQTILENESKLKNKKSVFYHPGPMHS----VLVNNYQ 246
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG-LNAAALAALASSQL--KTNHMPRN 235
M G + + A + M +N ++ + + + P
Sbjct: 247 MYMIYSGGAPTNPQDITPMVAPHQEHHQYHPMDKKTMNRRTKPPVSKYPIGPQQSLQPYT 306
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVP------NELIGAVIGKGGTKIFEIRK 289
+ +H + + QQ+ I+ + +P N+ +G VIGKGG I +I++
Sbjct: 307 DMVDSCKHVK-------IISQLQQSPISPHLVLPQEVFIDNKFVGNVIGKGGKNIQQIKQ 359
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVEL 334
+G MI+I ++ E ++R + + GTP A A +IN +++
Sbjct: 360 STGCMIKI---NDPVEGLDERKLVLIGTPLATQTAIMMINNRIDM 401
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 150/333 (45%), Gaps = 72/333 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMD------- 492
R + ++GS+IGK G +K LR+ESG+KI I+D+ ER++ +I S D
Sbjct: 5 FRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVI-LISSTDRGNDRGR 63
Query: 493 --------------SLFRAFSLITKNIEEFHKNQNKHLGGNGE---SQLIQLRLIVPASQ 535
+LF+ + I ++E + G + E SQ + RL+VP +Q
Sbjct: 64 GKDGNSEELTPAQEALFKVHARIIADVETSGID-----GSDQEEEPSQQVVTRLLVPNNQ 118
Query: 536 CGSIIGKGGSQIKTIRETSGASVYV-ASDMLPNS---TEREVNIKGVPDAVTQAIYQICL 591
G ++GKGG I+ +R+T+GA + V D LP T+ V + G + +A+ I
Sbjct: 119 IGCLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISA 178
Query: 592 IMVDSPPKGATIPYRPLPQNAGGPGLIG-NQFGMQNSLMGAPDMGNNPLAGLAALGLGGN 650
+ ++PP+ RP A P + + ++S G + GL L G
Sbjct: 179 RLQENPPRD-----RPQSYAAPAPAFVPVTDYLAKDSYRSK---GTGHVFGLGPEPLEGR 230
Query: 651 SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKE 710
S G L+ Q NR +++G + +N++
Sbjct: 231 SWTISSGNLSL-----------------------DRQDNRRSKEG----RDSGENELVFR 263
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 743
+ P++ IG+VIGKGG+ I +RK +GA I+I+
Sbjct: 264 LLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIA 296
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 148/325 (45%), Gaps = 72/325 (22%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMD--------------- 47
++GS+IGK G +K LR+ESG+KI I+D+ ER++ +I S D
Sbjct: 13 KIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVI-LISSTDRGNDRGRGKDGNSEE 71
Query: 48 ------SLFRAFSLITKNIEEFHKNQNKHLGGNGE---SQLIQLRLIVPASQCGSIIGKG 98
+LF+ + I ++E + G + E SQ + RL+VP +Q G ++GKG
Sbjct: 72 LTPAQEALFKVHARIIADVETSGID-----GSDQEEEPSQQVVTRLLVPNNQIGCLLGKG 126
Query: 99 GSQIKTIRETSGASVYV-ASDMLPNS---TEREVNIKGVPDAVTQAIYQICLIMVDSPPK 154
G I+ +R+T+GA + V D LP T+ V + G + +A+ I + ++PP+
Sbjct: 127 GKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARLQENPPR 186
Query: 155 GATIPYRPLPQNAGGPGLIG-NQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 213
RP A P + + ++S G + GL L G S G
Sbjct: 187 D-----RPQSYAAPAPAFVPVTDYLAKDSYRSK---GTGHVFGLGPEPLEGRSWTISSGN 238
Query: 214 LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELI 273
L+ Q NR +++G + +N++ + P++ I
Sbjct: 239 LSL-----------------------DRQDNRRSKEG----RDSGENELVFRLLCPSDKI 271
Query: 274 GAVIGKGGTKIFEIRKISGAMIRIS 298
G+VIGKGG+ I +RK +GA I+I+
Sbjct: 272 GSVIGKGGSIIHNLRKDTGARIKIA 296
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 86/154 (55%), Gaps = 8/154 (5%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
R + ++GS+IGK G + LR+++G++I I+++ + ER++ ++ +++ +FS
Sbjct: 262 FRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANAVPGSDERVI-IVSALELPGDSFS 320
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+ + + +GG+ + +I RL+VP +Q G ++GKGGS I+ +R + A++
Sbjct: 321 PALEAMIQVQSRITAEMGGDKDG-IITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIR 379
Query: 560 V-ASDMLPNS---TEREVNIKGVPDAVTQAIYQI 589
V D LP T+ V I G +A++Q+
Sbjct: 380 VLPKDTLPRCALDTDELVQIVGDTTVAREALFQV 413
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 84/146 (57%), Gaps = 8/146 (5%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE 62
++GS+IGK G + LR+++G++I I+++ + ER++ ++ +++ +FS + + +
Sbjct: 270 KIGSVIGKGGSIIHNLRKDTGARIKIANAVPGSDERVI-IVSALELPGDSFSPALEAMIQ 328
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDMLP 121
+GG+ + +I RL+VP +Q G ++GKGGS I+ +R + A++ V D LP
Sbjct: 329 VQSRITAEMGGDKDG-IITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVLPKDTLP 387
Query: 122 NS---TEREVNIKGVPDAVTQAIYQI 144
T+ V I G +A++Q+
Sbjct: 388 RCALDTDELVQIVGDTTVAREALFQV 413
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
+ R++ PA + GS+IGKGGS IKT+R+ SGA + +A D +P ER + I
Sbjct: 3 VVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIA-DAIPGVDERVILI 52
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 575
+ R++ PA + GS+IGKGGS IKT+R+ SGA + +A D +P ER + I
Sbjct: 3 VVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIA-DAIPGVDERVILI 52
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 63/346 (18%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
+R ++ GS+IGK G T+ + + +SG++I +S + T +RI+ + GS+ +
Sbjct: 36 HIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVV 95
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
LI +++ H + G E + ++RL+VP S CG IIGKGG+ IK+ E S
Sbjct: 96 NGLELI---LDKLHSELHAEDGNEVEPRR-RIRLVVPNSSCGGIIGKGGATIKSFIEESK 151
Query: 556 ASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
A + ++ + ++R V + G + +AI I + + QN
Sbjct: 152 AGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDD---------HYSQNVH 202
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
P AGL G G A AL ++A++
Sbjct: 203 SP---------------------YSYAGLFYSGFHGPP--------YAYALPSVATAGYN 233
Query: 674 T-NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
+ N+ P N G + ++++ T + V +E IG V+G+GG I EI
Sbjct: 234 SVNYAP-------------NGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEI 280
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
+++GA I+IS + + DR +++TG AI A+ +I V+
Sbjct: 281 TQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVD 326
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 149/335 (44%), Gaps = 63/335 (18%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GS+IGK G T+ + + +SG++I +S + T +RI+ + GS+ + LI ++
Sbjct: 47 GSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELI---LD 103
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDM 119
+ H + G E + ++RL+VP S CG IIGKGG+ IK+ E S A + ++ +
Sbjct: 104 KLHSELHAEDGNEVEPRR-RIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNT 162
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGM 179
++R V + G + +AI I + + QN P
Sbjct: 163 FYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDD---------HYSQNVHSP--------- 204
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT-NHMPRNQNQ 238
AGL G G A AL ++A++ + N+ P
Sbjct: 205 ------------YSYAGLFYSGFHGPP--------YAYALPSVATAGYNSVNYAP----- 239
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
N G + ++++ T + V +E IG V+G+GG I EI +++GA I+IS
Sbjct: 240 --------NGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKIS 291
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+ + DR +++TG AI A+ +I V+
Sbjct: 292 DRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVD 326
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 51/198 (25%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSST---PERIVTVIGSMDS 493
+RR+R ++ G IIGK G T+K EES + I IS D++ +R+VT+ G+ +
Sbjct: 120 RRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEE 179
Query: 494 LFRAFSLI-TKNIEEFHKNQNKH----------------------------------LGG 518
RA LI K E+ H +QN H
Sbjct: 180 QMRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAP 239
Query: 519 NG---------ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPN 567
NG E + + V G ++G+GG I I + +GA + ++ D +
Sbjct: 240 NGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSG 299
Query: 568 STEREVNIKGVPDAVTQA 585
+T+R+V+I G A+ QA
Sbjct: 300 TTDRKVSITGPQRAIQQA 317
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 81/262 (30%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ VPN G +IGKGG I + S A I+IS +DR +T++GT + A
Sbjct: 125 LVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRA- 183
Query: 326 YLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN----PLAAALPQLA 381
++L+ A L + D +S + + P S AGL S P A ALP +A
Sbjct: 184 ------IDLILAKLTED-------DHYSQNVHSPYS--YAGLFYSGFHGPPYAYALPSVA 228
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPN-----YANIQ-- 434
+ G+ V PN Y N +
Sbjct: 229 ------------------------------------TAGYNSVNYAPNGSGGKYQNHKEE 252
Query: 435 -----TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPERI 484
T GV + +G ++G+ G + ++ + +G++I ISD S T +R
Sbjct: 253 ASTTVTIGV--------ADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRK 304
Query: 485 VTVIGSMDSLFRAFSLITKNIE 506
V++ G ++ +A ++I + ++
Sbjct: 305 VSITGPQRAIQQAETMIKQKVD 326
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
V N G+VIGKGG+ I E + SGA I++S++ E + DR I ++G+ + L
Sbjct: 41 VSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLEL 100
Query: 328 INMSVELLRANLNGEGGGE 346
I ++ L + L+ E G E
Sbjct: 101 I---LDKLHSELHAEDGNE 116
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 772
V N G+VIGKGG+ I E + SGA I++S++ E + DR I ++G+ + L
Sbjct: 41 VSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLEL 100
Query: 773 INMSVELLRANLNGEGGGE 791
I ++ L + L+ E G E
Sbjct: 101 I---LDKLHSELHAEDGNE 116
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 25/133 (18%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ VPN G +IGKGG I + S A I+IS +DR +T++GT + A
Sbjct: 125 LVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRA- 183
Query: 771 YLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASN----PLAAALPQLA 826
++L+ A L + D +S + + P S AGL S P A ALP +A
Sbjct: 184 ------IDLILAKLTED-------DHYSQNVHSPYS--YAGLFYSGFHGPPYAYALPSVA 228
Query: 827 QILTKPAGLNASN 839
AG N+ N
Sbjct: 229 T-----AGYNSVN 236
>gi|406607447|emb|CCH41238.1| Insulin-like growth factor 2 mRNA-binding protein 2
[Wickerhamomyces ciferrii]
Length = 329
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
R ++ KE G +IGK+G + +R+++G K +S P+RI+TV G +DS +A
Sbjct: 38 FRILVSVKEAGIVIGKNGSVIADIRDQTGVKAGVSRVVQGCPDRILTVTGPLDSTAQALG 97
Query: 500 LITKNIEE-------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+I K + F K L GE LRL++P +Q G+IIG+ G++IKT++E
Sbjct: 98 MIAKALATSPLDETIFQYFPLKRLLPPGEEGSTSLRLLIPNAQMGTIIGRQGARIKTLQE 157
Query: 553 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQA--IYQICLIMVDSPPKGATIPYRPLPQ 610
+ + D L NSTER V ++G+P+ + A I CLI D T Y P P+
Sbjct: 158 NYDVRLVASKDFLQNSTERLVELQGLPEKIEIASKIIARCLIE-DWHSAAGTSFYLPTPR 216
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE G +IGK+G + +R+++G K +S P+RI+TV G +DS +A +I K +
Sbjct: 45 KEAGIVIGKNGSVIADIRDQTGVKAGVSRVVQGCPDRILTVTGPLDSTAQALGMIAKALA 104
Query: 62 E-------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
F K L GE LRL++P +Q G+IIG+ G++IKT++E +
Sbjct: 105 TSPLDETIFQYFPLKRLLPPGEEGSTSLRLLIPNAQMGTIIGRQGARIKTLQENYDVRLV 164
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQA--IYQICLIMVDSPPKGATIPYRPLPQ 165
+ D L NSTER V ++G+P+ + A I CLI D T Y P P+
Sbjct: 165 ASKDFLQNSTERLVELQGLPEKIEIASKIIARCLIE-DWHSAAGTSFYLPTPR 216
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 131/297 (44%), Gaps = 44/297 (14%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S +I R++V + G +IGK GS I IR+ +G V S ++ +R + + G D+
Sbjct: 33 SAIIGFRILVSVKEAGIVIGKNGSVIADIRDQTGVKAGV-SRVVQGCPDRILTVTGPLDS 91
Query: 137 VTQAIYQICLIMVDSPPKGATIPYRPL-----PQNAGGPGL--------IGNQFGMQNS- 182
QA+ I + SP Y PL P G L +G G Q +
Sbjct: 92 TAQALGMIAKALATSPLDETIFQYFPLKRLLPPGEEGSTSLRLLIPNAQMGTIIGRQGAR 151
Query: 183 -----------LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL------AALASS 225
L+ + D N L L G + + A L AA S
Sbjct: 152 IKTLQENYDVRLVASKDFLQNSTERLVELQ-GLPEKIEIASKIIARCLIEDWHSAAGTSF 210
Query: 226 QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 285
L T +PR ++ + N H N + + ++I+K + P++ +G +IGK G++I
Sbjct: 211 YLPTPRIPR-RSNHNNNHTTYNNHQNNGSNHSSNSEISKTVNFPSQFVGCLIGKAGSRIQ 269
Query: 286 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 342
EIRK+SGA I I+ E++D+N+R+ T+ G+ + ++ ++ L+ NL E
Sbjct: 270 EIRKVSGAQITIAS---EDDDNNERSFTLVGSNKS-------VDKALSFLQQNLEKE 316
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 131/297 (44%), Gaps = 44/297 (14%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S +I R++V + G +IGK GS I IR+ +G V S ++ +R + + G D+
Sbjct: 33 SAIIGFRILVSVKEAGIVIGKNGSVIADIRDQTGVKAGV-SRVVQGCPDRILTVTGPLDS 91
Query: 582 VTQAIYQICLIMVDSPPKGATIPYRPL-----PQNAGGPGL--------IGNQFGMQNS- 627
QA+ I + SP Y PL P G L +G G Q +
Sbjct: 92 TAQALGMIAKALATSPLDETIFQYFPLKRLLPPGEEGSTSLRLLIPNAQMGTIIGRQGAR 151
Query: 628 -----------LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL------AALASS 670
L+ + D N L L G + + A L AA S
Sbjct: 152 IKTLQENYDVRLVASKDFLQNSTERLVELQ-GLPEKIEIASKIIARCLIEDWHSAAGTSF 210
Query: 671 QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
L T +PR ++ + N H N + + ++I+K + P++ +G +IGK G++I
Sbjct: 211 YLPTPRIPR-RSNHNNNHTTYNNHQNNGSNHSSNSEISKTVNFPSQFVGCLIGKAGSRIQ 269
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 787
EIRK+SGA I I+ E++D+N+R+ T+ G+ + ++ ++ L+ NL E
Sbjct: 270 EIRKVSGAQITIAS---EDDDNNERSFTLVGSNKS-------VDKALSFLQQNLEKE 316
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IGK+G ++++R+ SG++I I+ D ER T++GS S+ +A S + +N+E+
Sbjct: 257 VGCLIGKAGSRIQEIRKVSGAQITIASEDDDNNERSFTLVGSNKSVDKALSFLQQNLEKE 316
Query: 64 HKNQNKHLGGNGE 76
+ + K + E
Sbjct: 317 KERREKLASADEE 329
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IGK+G ++++R+ SG++I I+ D ER T++GS S+ +A S + +N+E+
Sbjct: 257 VGCLIGKAGSRIQEIRKVSGAQITIASEDDDNNERSFTLVGSNKSVDKALSFLQQNLEKE 316
Query: 509 HKNQNKHLGGNGE 521
+ + K + E
Sbjct: 317 KERREKLASADEE 329
>gi|154794963|gb|ABS86517.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 270
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 36/282 (12%)
Query: 37 ERIVTVIGSMDSLFRAFSLITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 94
+R+++V G ++ + +A+S++ I + + +R++V + GSI
Sbjct: 6 DRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSI 65
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 152
IG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI++I CL M D
Sbjct: 66 IGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWE 124
Query: 153 PKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 211
T+ Y+P A GP G+ G + G G G SGG M
Sbjct: 125 RAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRAGSGVPSGGHMS 181
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------I 262
G + P +N N H+ N +G + N +
Sbjct: 182 GDV------------------PGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 223
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 304
T+ +++P +++G +IGKGG +I EIR++SG+ I I+K+ ++
Sbjct: 224 TQNISIPADMVGCIIGKGGAQINEIRRMSGSRISIAKTPHDD 265
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 36/282 (12%)
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
+R+++V G ++ + +A+S++ I + + +R++V + GSI
Sbjct: 6 DRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSI 65
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 597
IG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI++I CL M D
Sbjct: 66 IGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWE 124
Query: 598 PKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
T+ Y+P A GP G+ G + G G G SGG M
Sbjct: 125 RAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRAGSGVPSGGHMS 181
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------I 707
G + P +N N H+ N +G + N +
Sbjct: 182 GDV------------------PGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 223
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 749
T+ +++P +++G +IGKGG +I EIR++SG+ I I+K+ ++
Sbjct: 224 TQNISIPADMVGCIIGKGGAQINEIRRMSGSRISIAKTPHDD 265
>gi|313151207|ref|NP_998159.2| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 429
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI++V + ++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNATVSVPDSSGPERILSVSADIPTVAEILLKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ H G + + +LRL++ S GSIIG G++IK +R+++ ++ +
Sbjct: 105 IPTLEEYQH----HKGVDFD---CELRLLIHQSLAGSIIGLKGAKIKELRDSTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P ST+R V + G + V Q I + ++V++P KG Y P
Sbjct: 158 QECCPQSTDRVVLVGGKAERVVQCIKTMLELIVEAPIKGRAQQYDP 203
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI++V + ++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNATVSVPDSSGPERILSVSADIPTVAEILLKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ H G + + +LRL++ S GSIIG G++IK +R+++ ++ + +
Sbjct: 109 EEYQH----HKGVDFD---CELRLLIHQSLAGSIIGLKGAKIKELRDSTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P ST+R V + G + V Q I + ++V++P KG Y P
Sbjct: 162 PQSTDRVVLVGGKAERVVQCIKTMLELIVEAPIKGRAQQYDP 203
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E + S DR IT+TGT D I
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLQGSEDRIITITGTQDQI 410
Query: 322 ALAQYLI-NMSVELL 335
AQYL+ N ++ LL
Sbjct: 411 QNAQYLLQNSALHLL 425
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E + S DR IT+TGT D I
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLQGSEDRIITITGTQDQI 410
Query: 767 ALAQYLI-NMSVELL 780
AQYL+ N ++ LL
Sbjct: 411 QNAQYLLQNSALHLL 425
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 353 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLQGSEDRIITITGTQDQIQ 411
Query: 139 QAIY 142
A Y
Sbjct: 412 NAQY 415
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 353 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLQGSEDRIITITGTQDQIQ 411
Query: 584 QAIY 587
A Y
Sbjct: 412 NAQY 415
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 400 GGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSG 459
G ++D SS S SGG GP + TT V + GSIIGK G
Sbjct: 324 GSMNDGYDSNSSWDSSYQSGGRSSYSDGP----VITTQV------TIPKDLAGSIIGKGG 373
Query: 460 ETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLI 501
+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+
Sbjct: 374 QRIKQIRHESGASIKIDEPLQGSEDRIITITGTQDQIQNAQYLL 417
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLI 56
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+
Sbjct: 366 GSIIGKGGQRIKQIRHESGASIKIDEPLQGSEDRIITITGTQDQIQNAQYLL 417
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 148/344 (43%), Gaps = 84/344 (24%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
+R ++ GS+IGK G T+ + +SG++I +S + T +RI+ + G+ + + +
Sbjct: 36 IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIK 95
Query: 497 AFSLI-TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
A LI K + E H G+ ++RLIVP S CG IIGKGGS IK+ E S
Sbjct: 96 AMELILAKLLSEMHTED-----GDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQ 150
Query: 556 ASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
AS+ ++ + T+R V + G + +AI I + + P
Sbjct: 151 ASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHY-------------- 196
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
QF M AP + A ++ G N GG
Sbjct: 197 ------TQF------MNAP---FSYAAAYNSMNYGPNGAGG------------------- 222
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
+ Q+N+ +R N +T + V +E IG V+G+GG I +I
Sbjct: 223 -----------KFQNNKEDR----------SNSVT--IGVADEHIGLVVGRGGRNIMDIS 259
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+ SGA I+IS + + DR +T+TG+ AI A+ +I V
Sbjct: 260 QASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKV 303
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 144/334 (43%), Gaps = 84/334 (25%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLI-TKNI 60
GS+IGK G T+ + +SG++I +S + T +RI+ + G+ + + +A LI K +
Sbjct: 46 GSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SD 118
E H G+ ++RLIVP S CG IIGKGGS IK+ E S AS+ ++ +
Sbjct: 106 SEMHTED-----GDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDN 160
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
T+R V + G + +AI I + + P QF
Sbjct: 161 NYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHY--------------------TQF- 199
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
M AP + A ++ G N GG
Sbjct: 200 -----MNAP---FSYAAAYNSMNYGPNGAGG----------------------------- 222
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
+ Q+N+ +R N +T + V +E IG V+G+GG I +I + SGA I+IS
Sbjct: 223 -KFQNNKEDR----------SNSVT--IGVADEHIGLVVGRGGRNIMDISQASGARIKIS 269
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+ + DR +T+TG+ AI A+ +I V
Sbjct: 270 DRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKV 303
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 30/175 (17%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST-----PERIVTVIGSMDSLF 495
++R I+ G IIGK G T+K E+S + I IS +R+VT++GS++
Sbjct: 121 KVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQM 180
Query: 496 RAFSLI-TKNIEEFHKNQ-------------NKHLGGNG---------ESQLIQLRLIVP 532
RA LI +K E+ H Q + + G NG E + + + V
Sbjct: 181 RAIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPNGAGGKFQNNKEDRSNSVTIGVA 240
Query: 533 ASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQA 585
G ++G+GG I I + SGA + ++ D + +T+R+V I G A+ A
Sbjct: 241 DEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAA 295
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
V N G+VIGKGG+ I + + SGA I++S++ E ++DR I ++G + I A L
Sbjct: 40 VSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMEL 99
Query: 328 INMSVELLRANLNGEGGGESN 348
I + L + ++ E G E++
Sbjct: 100 I---LAKLLSEMHTEDGDEAD 117
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 772
V N G+VIGKGG+ I + + SGA I++S++ E ++DR I ++G + I A L
Sbjct: 40 VSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMEL 99
Query: 773 INMSVELLRANLNGEGGGESN 793
I + L + ++ E G E++
Sbjct: 100 I---LAKLLSEMHTEDGDEAD 117
>gi|363749247|ref|XP_003644841.1| hypothetical protein Ecym_2278 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888474|gb|AET38024.1| Hypothetical protein Ecym_2278 [Eremothecium cymbalariae
DBVPG#7215]
Length = 398
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 159/374 (42%), Gaps = 78/374 (20%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAF 498
MR + K ++G GE + +++E++ ++I +SD + PER+V + GS + + +AF
Sbjct: 49 HMRMLCLVKHASMVVGAKGERISRIKEDTKTRINVSDNIKNVPERVVYLRGSCEDVAKAF 108
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
I++ I N N S + + L++P G +IGK GS+++ I + S A +
Sbjct: 109 GKISRAI-----NDEDDRESNERSLPLTVNLLIPHHLMGYVIGKQGSRLREIEDLSAARL 163
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK---GATIPYRPLPQNAGGP 615
LP S +R + I GV DA+ A Y + ++ PK TI Y+P P ++
Sbjct: 164 VAGPQQLPMSNDRVLCITGVADAIHIATYYVGQTILTCEPKYKNKKTIFYQPNPLHS--- 220
Query: 616 GLIGNQFGMQ------------------------------NSLMGAPDMGNNPLAGLAAL 645
++ N +G+ N +M P N G+ +
Sbjct: 221 -VLVNNYGIAIQHQQHHQYHPGDKIKRSKSRMSPVLPPTPNEMMLQPSHNN---GGVIPI 276
Query: 646 GLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQN 705
G SG + +A L + ++ N P Q
Sbjct: 277 ---GPSGSTISNSTSAVVLPHVRIVEI-MNPQP------------------------QVT 308
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
+ +E+ + + ++G VIGKGG I +I+ +G I+I SE +R +T+ GTP
Sbjct: 309 PVVQEIFIEDSMVGNVIGKGGKSIAQIKGSTGCSIQI---SEPIPGLRERKLTIIGTPIG 365
Query: 766 IALAQYLINMSVEL 779
A +IN +++
Sbjct: 366 NQTAVMMINNKIDI 379
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 156/366 (42%), Gaps = 78/366 (21%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
K ++G GE + +++E++ ++I +SD + PER+V + GS + + +AF I++ I
Sbjct: 57 KHASMVVGAKGERISRIKEDTKTRINVSDNIKNVPERVVYLRGSCEDVAKAFGKISRAI- 115
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
N N S + + L++P G +IGK GS+++ I + S A + LP
Sbjct: 116 ----NDEDDRESNERSLPLTVNLLIPHHLMGYVIGKQGSRLREIEDLSAARLVAGPQQLP 171
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK---GATIPYRPLPQNAGGPGLIGNQFG 178
S +R + I GV DA+ A Y + ++ PK TI Y+P P ++ ++ N +G
Sbjct: 172 MSNDRVLCITGVADAIHIATYYVGQTILTCEPKYKNKKTIFYQPNPLHS----VLVNNYG 227
Query: 179 MQ------------------------------NSLMGAPDMGNNPLAGLAALGLGGNSGG 208
+ N +M P N G+ + G SG
Sbjct: 228 IAIQHQQHHQYHPGDKIKRSKSRMSPVLPPTPNEMMLQPSHNN---GGVIPI---GPSGS 281
Query: 209 GMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTV 268
+ +A L + ++ N P Q + +E+ +
Sbjct: 282 TISNSTSAVVLPHVRIVEI-MNPQP------------------------QVTPVVQEIFI 316
Query: 269 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+ ++G VIGKGG I +I+ +G I+I SE +R +T+ GTP A +I
Sbjct: 317 EDSMVGNVIGKGGKSIAQIKGSTGCSIQI---SEPIPGLRERKLTIIGTPIGNQTAVMMI 373
Query: 329 NMSVEL 334
N +++
Sbjct: 374 NNKIDI 379
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 151/372 (40%), Gaps = 80/372 (21%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMD 492
++ ++VGSIIG+ GE +KK+ EE+ ++I I D T ER V V +MD
Sbjct: 2 LVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAMD 61
Query: 493 SLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
L R I ++ N G + RL+VPASQ GS+IGK G +K+I+E
Sbjct: 62 GLLRVHKRIIDGLDSDSSNTPPTSGAK-----VSTRLLVPASQAGSLIGKQGGTVKSIQE 116
Query: 553 TSGASVYV--ASDM--LPNSTEREVNIKGVPDAVTQAIYQIC----LIMVDS-------- 596
S V V A D+ +R V + G V +A+ I +VD
Sbjct: 117 ASTCIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRSIIPLFEM 176
Query: 597 ------------PPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNN--PLAGL 642
PP + P +PLP N GG G +G M P +N P A +
Sbjct: 177 QMQMSNPSMEQMPPHQSWGPPQPLPPNHGG----GPGYGQNPQYMPPPRQLDNYYPPADM 232
Query: 643 AALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQ 702
L + G+ A + + ASS N + PS T
Sbjct: 233 PPL-MEKQPHQGISAYGREAPMGSHASS--------------------NAQAAPSMIT-- 269
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
QIT++M +P AVIG G I IR+ SGA + I E T+ ++GT
Sbjct: 270 ---QITQQMQIPLSYADAVIGTAGASISYIRRASGATVTI---QETRGVPGAMTVEISGT 323
Query: 763 PDAIALAQYLIN 774
+ AQ LI
Sbjct: 324 ASQVQTAQQLIQ 335
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 149/369 (40%), Gaps = 80/369 (21%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLF 50
++VGSIIG+ GE +KK+ EE+ ++I I D T ER V V +MD L
Sbjct: 5 AQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAMDGLL 64
Query: 51 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
R I ++ N G + RL+VPASQ GS+IGK G +K+I+E S
Sbjct: 65 RVHKRIIDGLDSDSSNTPPTSGAK-----VSTRLLVPASQAGSLIGKQGGTVKSIQEAST 119
Query: 111 ASVYV--ASDM--LPNSTEREVNIKGVPDAVTQAIYQIC----LIMVDS----------- 151
V V A D+ +R V + G V +A+ I +VD
Sbjct: 120 CIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRSIIPLFEMQMQ 179
Query: 152 ---------PPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNN--PLAGLAAL 200
PP + P +PLP N GG G +G M P +N P A + L
Sbjct: 180 MSNPSMEQMPPHQSWGPPQPLPPNHGG----GPGYGQNPQYMPPPRQLDNYYPPADMPPL 235
Query: 201 GLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQN 260
+ G+ A + + ASS N + PS T
Sbjct: 236 -MEKQPHQGISAYGREAPMGSHASS--------------------NAQAAPSMIT----- 269
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
QIT++M +P AVIG G I IR+ SGA + I E T+ ++GT
Sbjct: 270 QITQQMQIPLSYADAVIGTAGASISYIRRASGATVTI---QETRGVPGAMTVEISGTASQ 326
Query: 321 IALAQYLIN 329
+ AQ LI
Sbjct: 327 VQTAQQLIQ 335
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 157/382 (41%), Gaps = 96/382 (25%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VGSIIG+ GE +KK+ EE+ ++I I D T ER V V
Sbjct: 154 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSALPP 213
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD L R I ++ + H +G + RL+VPASQ GS+IGK G +K+
Sbjct: 214 AMDGLLRVHKRIVDGLD----GDSSH-ASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKS 268
Query: 550 IRETSGASVYV--ASDM--LPNSTEREVNIKGVPDAVTQAIYQIC----LIMVDS----- 596
I+E S V V A D+ +R V + G V +A+ I +VD
Sbjct: 269 IQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRKFLVDRSIIPL 328
Query: 597 ----------------PPKGATIPYRPLPQNAGG-PGLIGNQF-----GMQNSLMGA--- 631
PP + P + +P NAGG PG Q+ ++N A
Sbjct: 329 FEMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGGPGYGNPQYMPPPRQIENYYPPADLP 388
Query: 632 PDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRN 691
P M P G++A G A + SS N
Sbjct: 389 PPMEKQPHQGISAYG-------------REAPMGVHGSS--------------------N 415
Query: 692 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
++ PS T QIT++M +P AVIG GT I IR+ SGA + I E
Sbjct: 416 SQAAPSMIT-----QITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTI---QETRGV 467
Query: 752 SNDRTITMTGTPDAIALAQYLI 773
+ T+ ++GT + AQ LI
Sbjct: 468 PGEMTVEISGTASQVQTAQQLI 489
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 154/375 (41%), Gaps = 96/375 (25%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLFR 51
++VGSIIG+ GE +KK+ EE+ ++I I D T ER V V +MD L R
Sbjct: 161 QKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSALPPAMDGLLR 220
Query: 52 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
I ++ + H +G + RL+VPASQ GS+IGK G +K+I+E S
Sbjct: 221 VHKRIVDGLD----GDSSH-ASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQEASSC 275
Query: 112 SVYV--ASDM--LPNSTEREVNIKGVPDAVTQAIYQIC----LIMVDS------------ 151
V V A D+ +R V + G V +A+ I +VD
Sbjct: 276 VVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRKFLVDRSIIPLFEMHMQM 335
Query: 152 ---------PPKGATIPYRPLPQNAGG-PGLIGNQF-----GMQNSLMGA---PDMGNNP 193
PP + P + +P NAGG PG Q+ ++N A P M P
Sbjct: 336 QNPPHMEHMPPHQSWGPPQGIPPNAGGGPGYGNPQYMPPPRQIENYYPPADLPPPMEKQP 395
Query: 194 LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQ 253
G++A G A + SS N++ PS
Sbjct: 396 HQGISAYG-------------REAPMGVHGSS--------------------NSQAAPSM 422
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 313
T QIT++M +P AVIG GT I IR+ SGA + I E + T+
Sbjct: 423 IT-----QITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTI---QETRGVPGEMTVE 474
Query: 314 MTGTPDAIALAQYLI 328
++GT + AQ LI
Sbjct: 475 ISGTASQVQTAQQLI 489
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
+ K G GES R++VPA + GSIIG+ G IK I E + A + + D P +TER
Sbjct: 142 EKKWPGWPGESVF---RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL-DGPPGTTER 197
Query: 127 EVNI--KGVPDA 136
V + K PD+
Sbjct: 198 AVMVSAKEEPDS 209
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 224/530 (42%), Gaps = 76/530 (14%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
++N++D +K+ ++ N + VP VIGK G I +R S A I++S
Sbjct: 131 HKNHKDS-DKKSTEEAN-----ILVPASQASNVIGKSGAVIKHLRSTSRAFIKVSPKDPS 184
Query: 304 EED-----SNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNL 358
+ S D + +TG +A+ A L +S + + E+++ D + +
Sbjct: 185 DPTHSCAMSFDNFVQITGGAEAVKKA--LFGVSTIIYKHPSKENIPLETSIPDPTPSIII 242
Query: 359 PSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNS 418
PS P+ ASN +A P A P S+S LG + G
Sbjct: 243 PSELPV--YPASNFYSA--PDAAIPSVHP-------SMSVLGSTRHVPELAVPADDHGRL 291
Query: 419 GGFGGV-PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
+ + P P Y+ + +G + R + G ++G +IG+ G T+K +R+ESG++I + D
Sbjct: 292 PIYQSILPVIPTYSAPKCSG-ELEFRVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDD 350
Query: 478 S--STPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQ 535
+ E I+T+I S +S S + + N + E + LRL+VP
Sbjct: 351 AKNDKEESIITII-STESTDDVKSAAVEAVLLLQAKIN-----DSEDDRMNLRLLVPNKV 404
Query: 536 CGSIIGKGGSQIKTIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLI 592
G +IG+GGS + +R+ + A++ ++ P +S++ V + G D + A+ QI L
Sbjct: 405 IGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADKLRDALVQIILR 464
Query: 593 MVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALG-----L 647
+ + A + QN+ G + +SL G+ + PL L L
Sbjct: 465 L-----REAVLKESVESQNSDRDGQL--TVAASDSLYGS----SLPLPALLPHNQQIAPL 513
Query: 648 GGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQ 703
G + G L PR + + + DG PS +
Sbjct: 514 GYDRRGEPERALEV---------------FPRTSSYGYSSMQVTD-DGYGGLPSYASKAY 557
Query: 704 QNQITK-EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEE 750
+ + + EMTVP I V+GK GT + IRKISGA I I KSS E
Sbjct: 558 EEHVPRLEMTVPASGISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHEH 607
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 141/320 (44%), Gaps = 50/320 (15%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNI 60
G ++G +IG+ G T+K +R+ESG++I + D+ E I+T+I S +S S + +
Sbjct: 321 GGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITII-STESTDDVKSAAVEAV 379
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
N + E + LRL+VP G +IG+GGS + +R+ + A++ ++
Sbjct: 380 LLLQAKIN-----DSEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDK 434
Query: 121 P---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQF 177
P +S++ V + G D + A+ QI L + + A + QN+ G +
Sbjct: 435 PRRASSSDELVEVSGEADKLRDALVQIILRL-----REAVLKESVESQNSDRDGQL--TV 487
Query: 178 GMQNSLMGAPDMGNNPLAGLAALG-----LGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+SL G+ + PL L LG + G L
Sbjct: 488 AASDSLYGS----SLPLPALLPHNQQIAPLGYDRRGEPERALEV---------------F 528
Query: 233 PRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITK-EMTVPNELIGAVIGKGGTKIFEI 287
PR + + + DG PS + + + + EMTVP I V+GK GT + I
Sbjct: 529 PRTSSYGYSSMQVTD-DGYGGLPSYASKAYEEHVPRLEMTVPASGISKVMGKHGTNLDNI 587
Query: 288 RKISGAMIRI--SKSSEEEE 305
RKISGA I I KSS E
Sbjct: 588 RKISGAHIEIIEPKSSRHEH 607
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 154/377 (40%), Gaps = 65/377 (17%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTV-------------------IG 44
+GS+IGK G + +R ++ +K+ + D +R++ V
Sbjct: 52 IGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRDLDAEGDDNEPVCA 111
Query: 45 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
+ D+L R + I ++ HKN + E + ++VPASQ ++IGK G+ IK
Sbjct: 112 AQDALLRVHNAIVDALQTLHKNHKDSDKKSTE----EANILVPASQASNVIGKSGAVIKH 167
Query: 105 IRETSGASVYVA-------SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 157
+R TS A + V+ + S + V I G +AV +A++ + I+ P K
Sbjct: 168 LRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPSKENI 227
Query: 158 IPYRPLPQNAGGPG---LIGNQFGMQ--NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 212
PL + P +I ++ + ++ APD AA+ S +G
Sbjct: 228 ----PLETSIPDPTPSIIIPSELPVYPASNFYSAPD---------AAIPSVHPSMSVLGS 274
Query: 213 GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNEL 272
+ LA A +P Q+ P+ + ++ + P
Sbjct: 275 TRHVPELAVPADDH---GRLPIYQSILPVI--------PTYSAPKCSGELEFRVLCPGGK 323
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
IG VIG+GG I IR+ SGA I + + ++E+S I+ T D + A +V
Sbjct: 324 IGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAAV----EAV 379
Query: 333 ELLRANLNGEGGGESNM 349
LL+A +N N+
Sbjct: 380 LLLQAKINDSEDDRMNL 396
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 154/377 (40%), Gaps = 65/377 (17%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVT-------------------VIG 489
+GS+IGK G + +R ++ +K+ + D +R++ V
Sbjct: 52 IGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRDLDAEGDDNEPVCA 111
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+ D+L R + I ++ HKN + E + ++VPASQ ++IGK G+ IK
Sbjct: 112 AQDALLRVHNAIVDALQTLHKNHKDSDKKSTE----EANILVPASQASNVIGKSGAVIKH 167
Query: 550 IRETSGASVYVA-------SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 602
+R TS A + V+ + S + V I G +AV +A++ + I+ P K
Sbjct: 168 LRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPSKENI 227
Query: 603 IPYRPLPQNAGGPG---LIGNQFGMQ--NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
PL + P +I ++ + ++ APD AA+ S +G
Sbjct: 228 ----PLETSIPDPTPSIIIPSELPVYPASNFYSAPD---------AAIPSVHPSMSVLGS 274
Query: 658 GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNEL 717
+ LA A +P Q+ P+ + ++ + P
Sbjct: 275 TRHVPELAVPADDH---GRLPIYQSILPVI--------PTYSAPKCSGELEFRVLCPGGK 323
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
IG VIG+GG I IR+ SGA I + + ++E+S I+ T D + A +V
Sbjct: 324 IGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAAV----EAV 379
Query: 778 ELLRANLNGEGGGESNM 794
LL+A +N N+
Sbjct: 380 LLLQAKINDSEDDRMNL 396
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 40/266 (15%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-EEEDSNDRTITM 314
+ + +++ + VPN++IG +IG+GG+ + ++RK + A I ISK + S+D + +
Sbjct: 388 DSEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEV 447
Query: 315 TGTPDAI--ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
+G D + AL Q ++ + +L+ ++ + D L +A + +S P
Sbjct: 448 SGEADKLRDALVQIILRLREAVLKESVESQNSDR--------DGQLTVAASDSLYGSSLP 499
Query: 373 LAAALPQLAQI----LTKPG----ALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGV 424
L A LP QI + G AL S+ G S + G+GG+
Sbjct: 500 LPALLPHNQQIAPLGYDRRGEPERALEVFPRTSSYGYSSMQV----------TDDGYGGL 549
Query: 425 PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPE 482
P+YA+ R+ + + ++GK G + +R+ SG+ I I + SS E
Sbjct: 550 ---PSYASKAYEEHVPRLEMTVPASGISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHE 606
Query: 483 RIVTVIG------SMDSLFRAFSLIT 502
I + G S ++L +AF + T
Sbjct: 607 HIAYISGTSEQRHSAENLIKAFIMST 632
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-EEEDSNDRTITM 759
+ + +++ + VPN++IG +IG+GG+ + ++RK + A I ISK + S+D + +
Sbjct: 388 DSEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEV 447
Query: 760 TGTPDAI--ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+G D + AL Q ++ + +L+ ++ + D L +A + +S P
Sbjct: 448 SGEADKLRDALVQIILRLREAVLKESVESQNSDR--------DGQLTVAASDSLYGSSLP 499
Query: 818 LAAALPQLAQI 828
L A LP QI
Sbjct: 500 LPALLPHNQQI 510
>gi|158293805|ref|XP_315123.4| AGAP005015-PA [Anopheles gambiae str. PEST]
gi|157016622|gb|EAA10478.5| AGAP005015-PA [Anopheles gambiae str. PEST]
Length = 447
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 93/169 (55%), Gaps = 12/169 (7%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAF 498
++ +R ++ K G+IIGK G ++KLR E +++ + D + PER++T+ G M+++ +
Sbjct: 55 EQEVRLLIPSKMAGAIIGKGGHNIQKLRTEYQAQVNVGDCTGPERVLTIGGDMETVTKVV 114
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+ K+++ N+ +LR+++ S G +IG+GGS+IK I++ G +
Sbjct: 115 KDVMKHLDRAGDNE------------YELRILIHLSLAGCVIGRGGSKIKEIKDEIGCRL 162
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ S++ P ST+R + G + + + +I ++ +P KG Y P
Sbjct: 163 KIFSNIPPQSTDRIAQVIGSEEQCLKTLNEIIKLIKGTPIKGPVHNYDP 211
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G+IIGK G ++KLR E +++ + D + PER++T+ G M+++ + + K+++
Sbjct: 65 KMAGAIIGKGGHNIQKLRTEYQAQVNVGDCTGPERVLTIGGDMETVTKVVKDVMKHLDRA 124
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
N+ +LR+++ S G +IG+GGS+IK I++ G + + S++ P S
Sbjct: 125 GDNE------------YELRILIHLSLAGCVIGRGGSKIKEIKDEIGCRLKIFSNIPPQS 172
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
T+R + G + + + +I ++ +P KG Y P
Sbjct: 173 TDRIAQVIGSEEQCLKTLNEIIKLIKGTPIKGPVHNYDP 211
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
N+ + ++T+P +L GA+IGKGG +I IR S A I+I E SNDR IT+TGTP
Sbjct: 363 NKTSTQVTIPKDLAGAIIGKGGGRIRRIRNESNAFIQI---DEALPGSNDRIITITGTPK 419
Query: 320 AIALAQYLINMSVELLRANLNGEGGG 345
I AQY++ SV R NL+G G G
Sbjct: 420 EIQAAQYMLQQSV---RENLSGAGSG 442
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
N+ + ++T+P +L GA+IGKGG +I IR S A I+I E SNDR IT+TGTP
Sbjct: 363 NKTSTQVTIPKDLAGAIIGKGGGRIRRIRNESNAFIQI---DEALPGSNDRIITITGTPK 419
Query: 765 AIALAQYLINMSVELLRANLNGEGGG 790
I AQY++ SV R NL+G G G
Sbjct: 420 EIQAAQYMLQQSV---RENLSGAGSG 442
>gi|32451938|gb|AAH54653.1| Heterogeneous nuclear ribonucleoprotein K [Danio rerio]
gi|182890942|gb|AAI65841.1| Hnrnpk protein [Danio rerio]
Length = 420
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI++V + ++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKDIKALRTDYNATVSVPDSSGPERILSVSADIPTVAEILLKI 104
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ H G + + +LRL++ S GSIIG G++IK +R+++ ++ +
Sbjct: 105 IPTLEEY----QHHKGVDFD---CELRLLIHQSLAGSIIGLKGAKIKELRDSTQTTIKLF 157
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P ST+R V + G + V Q I + ++V++P KG Y P
Sbjct: 158 QECCPQSTDRVVLVGGKAERVVQCIKTMLELIVEAPIKGRAQQYDP 203
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI++V + ++ I +
Sbjct: 49 LQSKNAGAVIGKGGKDIKALRTDYNATVSVPDSSGPERILSVSADIPTVAEILLKIIPTL 108
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ H G + + +LRL++ S GSIIG G++IK +R+++ ++ + +
Sbjct: 109 EEY----QHHKGVDFD---CELRLLIHQSLAGSIIGLKGAKIKELRDSTQTTIKLFQECC 161
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P ST+R V + G + V Q I + ++V++P KG Y P
Sbjct: 162 PQSTDRVVLVGGKAERVVQCIKTMLELIVEAPIKGRAQQYDP 203
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E + S DR IT+TGT D I
Sbjct: 342 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLQGSEDRIITITGTQDQI 398
Query: 322 ALAQY 326
A Y
Sbjct: 399 QNALY 403
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E + S DR IT+TGT D I
Sbjct: 342 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLQGSEDRIITITGTQDQI 398
Query: 767 ALAQY 771
A Y
Sbjct: 399 QNALY 403
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 341 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLQGSEDRIITITGTQDQIQ 399
Query: 139 QAIYQ---IC-LIMV 149
A+YQ +C LI+V
Sbjct: 400 NALYQPPTVCSLILV 414
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 341 VITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLQGSEDRIITITGTQDQIQ 399
Query: 584 QAIYQ---IC-LIMV 594
A+YQ +C LI+V
Sbjct: 400 NALYQPPTVCSLILV 414
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAF 53
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A
Sbjct: 354 GSIIGKGGQRIKQIRHESGASIKIDEPLQGSEDRIITITGTQDQIQNAL 402
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAF 498
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A
Sbjct: 354 GSIIGKGGQRIKQIRHESGASIKIDEPLQGSEDRIITITGTQDQIQNAL 402
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 423 GVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SST 480
G P GP+ +R ++ K+ G IIGK G+ V LR+++G K +S
Sbjct: 20 GSPAGPDTLT---------LRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGV 70
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSII 540
+R++T+ GS+D + +A+ LI + N + + + LRL++ + G+II
Sbjct: 71 HDRVLTISGSVDRVAKAYGLIVAQL--VASNPTSPISASSSTH-TSLRLLISHNLMGTII 127
Query: 541 GKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG 600
G+GG++IK I++ SGA + + DMLP STER V + G +A+ +A+ I +++ +G
Sbjct: 128 GRGGTRIKAIQDNSGARMVASKDMLPQSTERVVEVHGSVEAIERAVDDIGKSLLEDWERG 187
Query: 601 -ATIPYRP 607
T+ + P
Sbjct: 188 LGTVLFHP 195
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 93/162 (57%), Gaps = 6/162 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK G+ V LR+++G K +S +R++T+ GS+D + +A+ LI +
Sbjct: 37 KDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRVLTISGSVDRVAKAYGLIVAQL- 95
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
N + + + LRL++ + G+IIG+GG++IK I++ SGA + + DMLP
Sbjct: 96 -VASNPTSPISASSSTH-TSLRLLISHNLMGTIIGRGGTRIKAIQDNSGARMVASKDMLP 153
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRP 162
STER V + G +A+ +A+ I +++ +G T+ + P
Sbjct: 154 QSTERVVEVHGSVEAIERAVDDIGKSLLEDWERGLGTVLFHP 195
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Query: 247 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
+R PS + Q N T+ +++P++++G +IG+GG+KI EIR++SG+ I I+K+ +E
Sbjct: 232 SRQAPS--SPQPTNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPHDE-- 287
Query: 307 SNDRTITMTGTPDAIALAQYLINMSVE 333
+ +R T+ GTP+A A +L+ +E
Sbjct: 288 TGERMFTIVGTPEANEKALFLLYNQLE 314
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Query: 692 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
+R PS + Q N T+ +++P++++G +IG+GG+KI EIR++SG+ I I+K+ +E
Sbjct: 232 SRQAPS--SPQPTNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPHDE-- 287
Query: 752 SNDRTITMTGTPDAIALAQYLINMSVE 778
+ +R T+ GTP+A A +L+ +E
Sbjct: 288 TGERMFTIVGTPEANEKALFLLYNQLE 314
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 48/194 (24%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ +G+IIG+ G +K +++ SG+++ S P ER+V V GS++++ RA
Sbjct: 114 LRLLISHNLMGTIIGRGGTRIKAIQDNSGARMVASKDMLPQSTERVVEVHGSVEAIERAV 173
Query: 499 SLITKNIEE----------FH-------------KNQNK-HLGGNGES------------ 522
I K++ E FH ++N+ GG+ +S
Sbjct: 174 DDIGKSLLEDWERGLGTVLFHPGAGDERSGSSRRYSENRGSYGGSRQSNGRPGSPGSPSR 233
Query: 523 ------QLIQLR---LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 573
Q LR + +P+ G IIG+GGS+I IR SG+ + +A + ER
Sbjct: 234 QAPSSPQPTNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPHDETGERMF 293
Query: 574 NIKGVPDAVTQAIY 587
I G P+A +A++
Sbjct: 294 TIVGTPEANEKALF 307
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 48/185 (25%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
+G+IIG+ G +K +++ SG+++ S P ER+V V GS++++ RA I K++ E
Sbjct: 123 MGTIIGRGGTRIKAIQDNSGARMVASKDMLPQSTERVVEVHGSVEAIERAVDDIGKSLLE 182
Query: 63 ----------FH-------------KNQNK-HLGGNGES------------------QLI 80
FH ++N+ GG+ +S Q
Sbjct: 183 DWERGLGTVLFHPGAGDERSGSSRRYSENRGSYGGSRQSNGRPGSPGSPSRQAPSSPQPT 242
Query: 81 QLR---LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
LR + +P+ G IIG+GGS+I IR SG+ + +A + ER I G P+A
Sbjct: 243 NLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPHDETGERMFTIVGTPEAN 302
Query: 138 TQAIY 142
+A++
Sbjct: 303 EKALF 307
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 104/262 (39%), Gaps = 82/262 (31%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ + + L+G +IG+GGT+I I+ SGA R+ S + S +R + + G+ +AI A
Sbjct: 115 RLLISHNLMGTIIGRGGTRIKAIQDNSGA--RMVASKDMLPQSTERVVEVHGSVEAIERA 172
Query: 325 QYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
I G+S ++D+ L +L
Sbjct: 173 VDDI----------------GKSLLEDWERG------------------------LGTVL 192
Query: 385 TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG-----------------VPQG 427
PGA + + GSS S N G +GG P
Sbjct: 193 FHPGAGDERS--------------GSSRRYSENRGSYGGSRQSNGRPGSPGSPSRQAPSS 238
Query: 428 PNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERI 484
P N++T + + VG IIG+ G + ++R SGSKI I+ + T ER+
Sbjct: 239 PQPTNLRTQNIS------IPSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPHDETGERM 292
Query: 485 VTVIGSMDSLFRAFSLITKNIE 506
T++G+ ++ +A L+ +E
Sbjct: 293 FTIVGTPEANEKALFLLYNQLE 314
>gi|157108094|ref|XP_001650073.1| heterogeneous nuclear ribonucleoprotein k [Aedes aegypti]
gi|108868581|gb|EAT32806.1| AAEL014959-PA [Aedes aegypti]
Length = 430
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 93/169 (55%), Gaps = 12/169 (7%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAF 498
+ +R ++ K G+IIGK+G ++KLR E +++ + D + PER++T+ G M+++
Sbjct: 37 EEEVRLLIPSKMAGAIIGKAGHNIQKLRTEYQAQVNVGDCTGPERVLTIGGDMETITNVV 96
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
K+ KHL GE++ +LR++V S G +IG+GG++IK +++ G +
Sbjct: 97 -----------KDVMKHLDKAGENEY-ELRILVHQSLAGCVIGRGGTKIKELKDQIGCRL 144
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ S++ P ST+R + G D A+ I ++ +P KG Y P
Sbjct: 145 KIFSNIAPQSTDRIAQVIGTEDQCLTALNDIIGLIQGTPIKGPVHNYDP 193
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 88/159 (55%), Gaps = 12/159 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G+IIGK+G ++KLR E +++ + D + PER++T+ G M+++
Sbjct: 47 KMAGAIIGKAGHNIQKLRTEYQAQVNVGDCTGPERVLTIGGDMETITNVV---------- 96
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
K+ KHL GE++ +LR++V S G +IG+GG++IK +++ G + + S++ P S
Sbjct: 97 -KDVMKHLDKAGENEY-ELRILVHQSLAGCVIGRGGTKIKELKDQIGCRLKIFSNIAPQS 154
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
T+R + G D A+ I ++ +P KG Y P
Sbjct: 155 TDRIAQVIGTEDQCLTALNDIIGLIQGTPIKGPVHNYDP 193
>gi|393247644|gb|EJD55151.1| hypothetical protein AURDEDRAFT_50272, partial [Auricularia
delicata TFB-10046 SS5]
Length = 313
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 97/169 (57%), Gaps = 5/169 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V +R+ +G K +S ER++T+ GS+D + +A++
Sbjct: 3 LRALVTTKDAGVIIGKAGKNVADIRDHTGVKAGVSKVVPGVHERVLTITGSVDGVAKAYT 62
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + + + + LRL++ + GS+IG+ G +IK I++ SGA +
Sbjct: 63 LIITQL--LSASTSSPTISSPPPTQTALRLLISHNLMGSVIGRNGLKIKAIQDASGARMV 120
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRP 607
+ DMLP STER V ++G +A+ +AI +I +++ +G T+ + P
Sbjct: 121 ASKDMLPQSTERIVEVQGTAEAIGRAIEEIGKCLLEDWERGQGTVLFHP 169
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 93/162 (57%), Gaps = 5/162 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V +R+ +G K +S ER++T+ GS+D + +A++LI +
Sbjct: 10 KDAGVIIGKAGKNVADIRDHTGVKAGVSKVVPGVHERVLTITGSVDGVAKAYTLIITQL- 68
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ + + LRL++ + GS+IG+ G +IK I++ SGA + + DMLP
Sbjct: 69 -LSASTSSPTISSPPPTQTALRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASKDMLP 127
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRP 162
STER V ++G +A+ +AI +I +++ +G T+ + P
Sbjct: 128 QSTERIVEVQGTAEAIGRAIEEIGKCLLEDWERGQGTVLFHP 169
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
N T+ +++P++++G +IG+ GTKI EIR++SG+ I I+K+ +E + +R T+ GTP+
Sbjct: 214 NLRTQNISIPSDMVGCIIGRQGTKITEIRRLSGSKISIAKTPHDE--TGERMFTIVGTPE 271
Query: 320 AIALAQYLINMSVE 333
A A +L+ +E
Sbjct: 272 ANEKALFLLYNQLE 285
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
N T+ +++P++++G +IG+ GTKI EIR++SG+ I I+K+ +E + +R T+ GTP+
Sbjct: 214 NLRTQNISIPSDMVGCIIGRQGTKITEIRRLSGSKISIAKTPHDE--TGERMFTIVGTPE 271
Query: 765 AIALAQYLINMSVE 778
A A +L+ +E
Sbjct: 272 ANEKALFLLYNQLE 285
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 45/194 (23%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLF 495
Q +R ++ +GS+IG++G +K +++ SG+++ S P ERIV V G+ +++
Sbjct: 85 QTALRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGTAEAIG 144
Query: 496 RAFSLITKN-IEEFHKNQNKHLGGNGE--------------------------------- 521
RA I K +E++ + Q L G
Sbjct: 145 RAIEEIGKCLLEDWERGQGTVLFHPGHGVDDGRSPSRRSPASTFTSPSGMGRSSPVPSSP 204
Query: 522 --------SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 573
+ L + +P+ G IIG+ G++I IR SG+ + +A + ER
Sbjct: 205 QSVNSASANNLRTQNISIPSDMVGCIIGRQGTKITEIRRLSGSKISIAKTPHDETGERMF 264
Query: 574 NIKGVPDAVTQAIY 587
I G P+A +A++
Sbjct: 265 TIVGTPEANEKALF 278
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 45/182 (24%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNI-E 61
+GS+IG++G +K +++ SG+++ S P ERIV V G+ +++ RA I K + E
Sbjct: 97 MGSVIGRNGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGTAEAIGRAIEEIGKCLLE 156
Query: 62 EFHKNQNKHLGGNGE-----------------------------------------SQLI 80
++ + Q L G + L
Sbjct: 157 DWERGQGTVLFHPGHGVDDGRSPSRRSPASTFTSPSGMGRSSPVPSSPQSVNSASANNLR 216
Query: 81 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
+ +P+ G IIG+ G++I IR SG+ + +A + ER I G P+A +A
Sbjct: 217 TQNISIPSDMVGCIIGRQGTKITEIRRLSGSKISIAKTPHDETGERMFTIVGTPEANEKA 276
Query: 141 IY 142
++
Sbjct: 277 LF 278
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 152/348 (43%), Gaps = 54/348 (15%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
+R ++ G IIGK G T+ + +SG++I +S S T +RI+ V G D +
Sbjct: 50 HLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVV 109
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
+A L+ + + + N+ E++ + RL+VP S CG IIGKGG+ IK+ E S
Sbjct: 110 KAMELVLEKLLSEGEESNE-----AEARP-KFRLVVPNSSCGGIIGKGGATIKSFIEDSH 163
Query: 556 ASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIM---VDSPPKGATIPYRPLPQ 610
A + ++ + +R V I G ++ +AI+ I + V PP ++ P P
Sbjct: 164 AGIKISPQDNNFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPPNLSS----PFPY 219
Query: 611 NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASS 670
G G + M P NN + G N A
Sbjct: 220 --AGLGFPSYPAAVPVGYMIPPVPYNN----------------TVNYGPNGYAAPGGGGG 261
Query: 671 QLKTNHMPRNQNQNQNQHNRNNRDG-PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
+ +NN+ G P + Q + + V +E IGAV+G+ G I
Sbjct: 262 GGRY---------------QNNKPGTPVRSPANNDAQESHTIGVADEHIGAVVGRAGRNI 306
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
EI + SGA I+IS + ++DR +T+TG+ +AI A+ +I V
Sbjct: 307 TEIIQASGARIKISDRGDFIAGTSDRKVTITGSSEAIQAAEAMIMQRV 354
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 148/337 (43%), Gaps = 54/337 (16%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
G IIGK G T+ + +SG++I +S S T +RI+ V G D + +A L+ + +
Sbjct: 61 GCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVVKAMELVLEKLL 120
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDM 119
+ N+ E++ + RL+VP S CG IIGKGG+ IK+ E S A + ++ +
Sbjct: 121 SEGEESNE-----AEARP-KFRLVVPNSSCGGIIGKGGATIKSFIEDSHAGIKISPQDNN 174
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIM---VDSPPKGATIPYRPLPQNAGGPGLIGNQ 176
+R V I G ++ +AI+ I + V PP ++ P P G G
Sbjct: 175 FVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPPNLSS----PFPY--AGLGFPSYP 228
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+ M P NN + G N A +
Sbjct: 229 AAVPVGYMIPPVPYNN----------------TVNYGPNGYAAPGGGGGGGRY------- 265
Query: 237 NQNQNQHNRNNRDG-PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+NN+ G P + Q + + V +E IGAV+G+ G I EI + SGA I
Sbjct: 266 --------QNNKPGTPVRSPANNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGARI 317
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+IS + ++DR +T+TG+ +AI A+ +I V
Sbjct: 318 KISDRGDFIAGTSDRKVTITGSSEAIQAAEAMIMQRV 354
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 32/258 (12%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
+++N+ + + + VPN G +IGKGG I + S A I+IS +DR +
Sbjct: 124 EESNEAEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDSHAGIKISPQDNNFVGLHDRLV 183
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
T+TG ++ A +LI + +D NL S P AGL +
Sbjct: 184 TITGPLNSQMRAIHLILSKLS----------------EDVHYPPNLSSPFPYAGLGFPS- 226
Query: 373 LAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYAN 432
AA+P + P N + G + GGG + G P +
Sbjct: 227 YPAAVP--VGYMIPPVPYNNTVNYGPNGYAAPGGGGGGGRYQNNKPGTPVRSPANNDAQE 284
Query: 433 IQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPERIVTV 487
T GV + +G+++G++G + ++ + SG++I ISD + T +R VT+
Sbjct: 285 SHTIGV--------ADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTI 336
Query: 488 IGSMDSLFRAFSLITKNI 505
GS +++ A ++I + +
Sbjct: 337 TGSSEAIQAAEAMIMQRV 354
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 247 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
+ D + + ++ V N G +IGKGG+ I + + SGA I++S+S E
Sbjct: 34 DHDPAADHEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPG 93
Query: 307 SNDRTITMTGTPDAIALAQYLI 328
+NDR I ++G D + A L+
Sbjct: 94 TNDRIIMVSGLFDEVVKAMELV 115
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 692 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
+ D + + ++ V N G +IGKGG+ I + + SGA I++S+S E
Sbjct: 34 DHDPAADHEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPG 93
Query: 752 SNDRTITMTGTPDAIALAQYLI 773
+NDR I ++G D + A L+
Sbjct: 94 TNDRIIMVSGLFDEVVKAMELV 115
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 81 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVT 138
LR +V + G IIGKGGS I + SGA + + + + P + +R + + G+ D V
Sbjct: 50 HLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVV 109
Query: 139 QAI 141
+A+
Sbjct: 110 KAM 112
>gi|255719726|ref|XP_002556143.1| KLTH0H06050p [Lachancea thermotolerans]
gi|238942109|emb|CAR30281.1| KLTH0H06050p [Lachancea thermotolerans CBS 6340]
Length = 392
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 156/355 (43%), Gaps = 45/355 (12%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAF 498
+R + K+ I+G GE + +++EE+ ++I +SD+ PER++ + G + + + F
Sbjct: 57 HLRMLCLVKQASMIVGPGGEKISRMKEETNTRINVSDNIRGVPERVIFIRGRCEDVAKVF 116
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
++ + I N + +S + L +++P G +IG+ GS+++ I E S A +
Sbjct: 117 GMVVRAI-----NGETDGESSEQSATLTLNILIPHHMMGCVIGRQGSRLREIEELSAAKL 171
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT---IPYRPLPQNAGGP 615
LP S +R + + GV DA+ A Y + +++ A+ I Y P ++
Sbjct: 172 MAGPQTLPMSNDRILCVSGVADAIHIATYYVGQTILNHKATFASKKCIFYLPSLLHS--- 228
Query: 616 GLIGNQFG--MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
++ N +G +Q+ G N L + G G +A +A
Sbjct: 229 -VLVNSYGVSLQHQQQHQYRPGENGKKRLHRYSASPDFGYAYPGVPSAPHMAV------- 280
Query: 674 TNHMPRNQNQNQNQHNRNNRDGPSQKT-----NQQQNQITKEMTVPNELIGAVIGKGGTK 728
HN D + T Q + I +E+ + + +G VIGKGG
Sbjct: 281 --------------HNVRVADTLAAATIPPALAPQLSLIQQEVYIDDNYVGNVIGKGGKH 326
Query: 729 IFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 783
I I++ +G I+I + E ++R I + GTP A LIN +E+ R N
Sbjct: 327 INSIKETTGCSIQI---DDHVEGCSERKILIRGTPIGSQTAILLINNKIEMDRRN 378
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 153/347 (44%), Gaps = 45/347 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ I+G GE + +++EE+ ++I +SD+ PER++ + G + + + F ++ + I
Sbjct: 65 KQASMIVGPGGEKISRMKEETNTRINVSDNIRGVPERVIFIRGRCEDVAKVFGMVVRAI- 123
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
N + +S + L +++P G +IG+ GS+++ I E S A + LP
Sbjct: 124 ----NGETDGESSEQSATLTLNILIPHHMMGCVIGRQGSRLREIEELSAAKLMAGPQTLP 179
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT---IPYRPLPQNAGGPGLIGNQFG 178
S +R + + GV DA+ A Y + +++ A+ I Y P ++ ++ N +G
Sbjct: 180 MSNDRILCVSGVADAIHIATYYVGQTILNHKATFASKKCIFYLPSLLHS----VLVNSYG 235
Query: 179 --MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQ 236
+Q+ G N L + G G +A +A
Sbjct: 236 VSLQHQQQHQYRPGENGKKRLHRYSASPDFGYAYPGVPSAPHMAV--------------- 280
Query: 237 NQNQNQHNRNNRDGPSQKT-----NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
HN D + T Q + I +E+ + + +G VIGKGG I I++ +
Sbjct: 281 ------HNVRVADTLAAATIPPALAPQLSLIQQEVYIDDNYVGNVIGKGGKHINSIKETT 334
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
G I+I + E ++R I + GTP A LIN +E+ R N
Sbjct: 335 GCSIQI---DDHVEGCSERKILIRGTPIGSQTAILLINNKIEMDRRN 378
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 146/340 (42%), Gaps = 98/340 (28%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG---------- 489
R++ ++GSIIG G+ K+LR E+ SKI IS++ ER+VT+
Sbjct: 45 FRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSED 104
Query: 490 -------SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+ D+LFR + ++ H Q I +R++VP+ Q G +IGK
Sbjct: 105 TGDLISPAQDALFRVHDRVLAEDLRMDEDLEDH-------QQITVRMLVPSDQIGCVIGK 157
Query: 543 GGSQIKTIRETSGASVYV-ASDMLP----NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
GG I+ +R +GA + V +S+ LP NS E + I G V +A+YQ+ + D+P
Sbjct: 158 GGQVIQNLRSETGAQIRVLSSEHLPPCALNSDEL-LQITGEGAVVKKALYQVAARLHDNP 216
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGN------NPLAGLAALGLGGNS 651
+ Q+ L+ +P + NP AG +G+
Sbjct: 217 SRS------------------------QHQLLSSPSIFRSGAGFVNPHAGTQVMGV---- 248
Query: 652 GGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEM 711
+ + AS + DG S+ ++ ++ + +
Sbjct: 249 ---------TSLMGPYASYK---------------------SDGRSKSSSVKEFAV--RL 276
Query: 712 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
P E +GAVIGKGG I ++R+ SGA I++ ++ E +D
Sbjct: 277 VCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDD 316
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 98/332 (29%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG-----------------S 45
++GSIIG G+ K+LR E+ SKI IS++ ER+VT+ +
Sbjct: 53 KIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPA 112
Query: 46 MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTI 105
D+LFR + ++ H Q I +R++VP+ Q G +IGKGG I+ +
Sbjct: 113 QDALFRVHDRVLAEDLRMDEDLEDH-------QQITVRMLVPSDQIGCVIGKGGQVIQNL 165
Query: 106 RETSGASVYV-ASDMLP----NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
R +GA + V +S+ LP NS E + I G V +A+YQ+ + D+P +
Sbjct: 166 RSETGAQIRVLSSEHLPPCALNSDEL-LQITGEGAVVKKALYQVAARLHDNPSRS----- 219
Query: 161 RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGN------NPLAGLAALGLGGNSGGGMGGGL 214
Q+ L+ +P + NP AG +G+
Sbjct: 220 -------------------QHQLLSSPSIFRSGAGFVNPHAGTQVMGV------------ 248
Query: 215 NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 274
+ + AS + DG S+ ++ ++ + + P E +G
Sbjct: 249 -TSLMGPYASYK---------------------SDGRSKSSSVKEFAV--RLVCPTENVG 284
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
AVIGKGG I ++R+ SGA I++ ++ E +D
Sbjct: 285 AVIGKGGGIIKQLRQESGASIKVDSAAAEGDD 316
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 4/154 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R + + VG++IGK G +K+LR+ESG+ I + ++ + S F S
Sbjct: 274 VRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPT 333
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++ ++ RL+VP+S+ G +IGKGGS I +R ++ AS+ V
Sbjct: 334 IDATMRLQPRSSEKTEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVL 393
Query: 562 S-DMLPNSTERE---VNIKGVPDAVTQAIYQICL 591
S + LP + V I G + T A+ Q+ +
Sbjct: 394 SKENLPKVASEDDEMVQITGDANVATNALLQVLM 427
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
VG++IGK G +K+LR+ESG+ I + ++ + S F S
Sbjct: 283 VGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPTIDATMRLQP 342
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS-DMLPNST 124
++ ++ RL+VP+S+ G +IGKGGS I +R ++ AS+ V S + LP
Sbjct: 343 RSSEKTEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVA 402
Query: 125 ERE---VNIKGVPDAVTQAIYQICL 146
+ V I G + T A+ Q+ +
Sbjct: 403 SEDDEMVQITGDANVATNALLQVLM 427
>gi|72013105|ref|XP_781909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 447
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV-IGSMDSLFRAFSL 500
R +++ G +IGK GE +K+LR + +K+ I D + PERI+ + ++D+
Sbjct: 37 FRLMIRSINAGGVIGKGGENIKRLRVDYDAKVSIPDCNGPERIIKIGTRNVDNAIDCIKD 96
Query: 501 ITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
I ++ E KH + I R++V S G+IIG+ G +IK +RE +GA V
Sbjct: 97 IIPSVGE-----KKHSQDQQNNSFI--RIMVHQSHAGAIIGRAGFKIKELREKTGAHFKV 149
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 620
++ P ST+R V + G PD + +A ++ I ++ KG Y P + N
Sbjct: 150 YTETCPKSTDRVVQLTGSPDVIAKAAREVYEICTETAVKGPVQDYDPFCHDLD----FYN 205
Query: 621 QFG 623
Q+G
Sbjct: 206 QYG 208
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV-IGSMDSLFRAFSLITKNIEEFHK 65
G +IGK GE +K+LR + +K+ I D + PERI+ + ++D+ I ++ E
Sbjct: 47 GGVIGKGGENIKRLRVDYDAKVSIPDCNGPERIIKIGTRNVDNAIDCIKDIIPSVGE--- 103
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
KH + I R++V S G+IIG+ G +IK +RE +GA V ++ P ST+
Sbjct: 104 --KKHSQDQQNNSFI--RIMVHQSHAGAIIGRAGFKIKELREKTGAHFKVYTETCPKSTD 159
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
R V + G PD + +A ++ I ++ KG Y P + NQ+G
Sbjct: 160 RVVQLTGSPDVIAKAAREVYEICTETAVKGPVQDYDPFCHDLD----FYNQYG 208
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
++++T+PN+L G++IG+GG +I IR SGA I+I + + DR IT+TGT IA
Sbjct: 370 SQQVTIPNDLAGSIIGRGGQRIKRIRMQSGAQIKI---DDPLSGAKDRIITITGTQHDIA 426
Query: 323 LAQYLINMSVE 333
A++L+ SV+
Sbjct: 427 HAKFLLQNSVK 437
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
++++T+PN+L G++IG+GG +I IR SGA I+I + + DR IT+TGT IA
Sbjct: 370 SQQVTIPNDLAGSIIGRGGQRIKRIRMQSGAQIKI---DDPLSGAKDRIITITGTQHDIA 426
Query: 768 LAQYLINMSVE 778
A++L+ SV+
Sbjct: 427 HAKFLLQNSVK 437
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 250 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 309
G + + QQN + V GA+IG+ G KI E+R+ +GA ++ +E S D
Sbjct: 102 GEKKHSQDQQNNSFIRIMVHQSHAGAIIGRAGFKIKELREKTGAHFKV--YTETCPKSTD 159
Query: 310 RTITMTGTPDAIALA 324
R + +TG+PD IA A
Sbjct: 160 RVVQLTGSPDVIAKA 174
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 695 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 754
G + + QQN + V GA+IG+ G KI E+R+ +GA ++ +E S D
Sbjct: 102 GEKKHSQDQQNNSFIRIMVHQSHAGAIIGRAGFKIKELREKTGAHFKV--YTETCPKSTD 159
Query: 755 RTITMTGTPDAIALA 769
R + +TG+PD IA A
Sbjct: 160 RVVQLTGSPDVIAKA 174
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIG+ G+ +K++R +SG++I I D S +RI+T+ G+ + A L+ +++E+
Sbjct: 381 GSIIGRGGQRIKRIRMQSGAQIKIDDPLSGAKDRIITITGTQHDIAHAKFLLQNSVKEY 439
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIG+ G+ +K++R +SG++I I D S +RI+T+ G+ + A L+ +++E+
Sbjct: 381 GSIIGRGGQRIKRIRMQSGAQIKIDDPLSGAKDRIITITGTQHDIAHAKFLLQNSVKEY 439
>gi|115533118|ref|NP_001041081.1| Protein C12D8.1, isoform c [Caenorhabditis elegans]
gi|82465146|emb|CAJ43440.1| Protein C12D8.1, isoform c [Caenorhabditis elegans]
Length = 548
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK G+T+K+L E+G+KI D STPER ++G+ D ++RA T+ I E
Sbjct: 197 VGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRA----TERITE 252
Query: 63 FHKNQNKHLGGNG-------ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
K GG G ++ + VPA++CG +IGKGG IK I SGA +
Sbjct: 253 LVKKSTMQQGGGGNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCEL 312
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 161
+ D N+ E+ IKG A+ A + I + + D P P+R
Sbjct: 313 SRDPTGNADEKVFVIKGGKRAIEHAKHLIRIKVGDIAP---NTPFR 355
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK G+T+K+L E+G+KI D STPER ++G+ D ++RA T+ I E
Sbjct: 197 VGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRA----TERITE 252
Query: 508 FHKNQNKHLGGNG-------ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
K GG G ++ + VPA++CG +IGKGG IK I SGA +
Sbjct: 253 LVKKSTMQQGGGGNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCEL 312
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 606
+ D N+ E+ IKG A+ A + I + + D P P+R
Sbjct: 313 SRDPTGNADEKVFVIKGGKRAIEHAKHLIRIKVGDIAP---NTPFR 355
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 6 VGSIIGKSGETVKKLREESGSKIY-------ISDSSTPERIVTVIGSMDSLFRAFSLITK 58
G IIGKSG+T+++L+E+SG K+ +SD S P RI G + A L+ +
Sbjct: 103 CGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRIT---GDPQKIELAKQLVAE 159
Query: 59 NIEEFHKNQNK-----HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
+ H G G + ++VP S G IIGK G IK + +G +
Sbjct: 160 ILNSGGDGNGGSGLQMHHAGGGGGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKI 219
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
D P++ ER I G D + +A +I ++ S
Sbjct: 220 QFKPDDDPSTPERCAVIMGTRDQIYRATERITELVKKS 257
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG +IG+ G ++ ++ ++G ++ +S + P R+VT+ GS ++ A LI E
Sbjct: 18 VGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN---EV 74
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
++QN + + +P ++CG IIGK G I+ ++E SG + + D
Sbjct: 75 VARSQNPRPQYGFPRAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD 130
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 507
VG +IG+ G ++ ++ ++G ++ +S + P R+VT+ GS ++ A LI E
Sbjct: 18 VGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN---EV 74
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
++QN + + +P ++CG IIGK G I+ ++E SG + + D
Sbjct: 75 VARSQNPRPQYGFPRAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD 130
>gi|302697985|ref|XP_003038671.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
gi|300112368|gb|EFJ03769.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
Length = 308
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF- 498
+R ++ K+ G IIGK G+ V +LRE +G K +S ER++T+ GS + + +A+
Sbjct: 3 LRALVSTKDAGVIIGKGGKNVAELREVTGVKAGVSKVVPGVHERVLTINGSPEGIAKAYQ 62
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I + + + + +RL+V + G+IIG+GG +IK I++ SGA +
Sbjct: 63 HIIAQLVSASAGSPELDASVVATNPHTMIRLLVSHNLMGTIIGRGGLKIKAIQDASGARL 122
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICL-IMVDSPPKGATIPYRP 607
DMLP STER V + GVPD + +AIY+I ++ D T+ Y P
Sbjct: 123 VAQKDMLPQSTERVVEVHGVPDEIGRAIYEISKSLLEDWERNTGTVLYHP 172
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 4/163 (2%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF-SLITKNI 60
K+ G IIGK G+ V +LRE +G K +S ER++T+ GS + + +A+ +I + +
Sbjct: 10 KDAGVIIGKGGKNVAELREVTGVKAGVSKVVPGVHERVLTINGSPEGIAKAYQHIIAQLV 69
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+ + +RL+V + G+IIG+GG +IK I++ SGA + DML
Sbjct: 70 SASAGSPELDASVVATNPHTMIRLLVSHNLMGTIIGRGGLKIKAIQDASGARLVAQKDML 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICL-IMVDSPPKGATIPYRP 162
P STER V + GVPD + +AIY+I ++ D T+ Y P
Sbjct: 130 PQSTERVVEVHGVPDEIGRAIYEISKSLLEDWERNTGTVLYHP 172
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T+ +++P++++G +IG+GGTKI EIR++SG+ I I+K+ +E + +R T+ G+P+A
Sbjct: 217 TQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKAPHDE--TGERMFTIVGSPEANE 274
Query: 323 LAQYLINMSVE 333
A YL+ +E
Sbjct: 275 KALYLLYNQLE 285
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T+ +++P++++G +IG+GGTKI EIR++SG+ I I+K+ +E + +R T+ G+P+A
Sbjct: 217 TQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKAPHDE--TGERMFTIVGSPEANE 274
Query: 768 LAQYLINMSVE 778
A YL+ +E
Sbjct: 275 KALYLLYNQLE 285
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 42/199 (21%)
Query: 431 ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTV 487
A++ T +R ++ +G+IIG+ G +K +++ SG+++ P ER+V V
Sbjct: 80 ASVVATNPHTMIRLLVSHNLMGTIIGRGGLKIKAIQDASGARLVAQKDMLPQSTERVVEV 139
Query: 488 IGSMDSLFRAFSLITKN-IEEFHKNQNKHL----------------GGNGESQLIQLRLI 530
G D + RA I+K+ +E++ +N L NG S + R I
Sbjct: 140 HGVPDEIGRAIYEISKSLLEDWERNTGTVLYHPQAAEASGAAARRPSTNGFSPGARRRAI 199
Query: 531 ----------------------VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
+P+ G IIG+GG++I IR SG+ + +A +
Sbjct: 200 SPTPSAGSQSTPNALIRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKAPHDET 259
Query: 569 TEREVNIKGVPDAVTQAIY 587
ER I G P+A +A+Y
Sbjct: 260 GERMFTIVGSPEANEKALY 278
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 42/179 (23%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNI-E 61
+G+IIG+ G +K +++ SG+++ P ER+V V G D + RA I+K++ E
Sbjct: 100 MGTIIGRGGLKIKAIQDASGARLVAQKDMLPQSTERVVEVHGVPDEIGRAIYEISKSLLE 159
Query: 62 EFHKNQNKHL----------------GGNGESQLIQLRLI-------------------- 85
++ +N L NG S + R I
Sbjct: 160 DWERNTGTVLYHPQAAEASGAAARRPSTNGFSPGARRRAISPTPSAGSQSTPNALIRTQN 219
Query: 86 --VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+P+ G IIG+GG++I IR SG+ + +A + ER I G P+A +A+Y
Sbjct: 220 ISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKAPHDETGERMFTIVGSPEANEKALY 278
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
LR +V G IIGKGG + +RE +G V S ++P ER + I G P+ + +A
Sbjct: 3 LRALVSTKDAGVIIGKGGKNVAELREVTGVKAGV-SKVVPGVHERVLTINGSPEGIAKAY 61
Query: 142 YQICLIMVDS 151
I +V +
Sbjct: 62 QHIIAQLVSA 71
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ V + L+G +IG+GG KI I+ SGA R+ + S +R + + G PD I A
Sbjct: 93 LLVSHNLMGTIIGRGGLKIKAIQDASGA--RLVAQKDMLPQSTERVVEVHGVPDEIGRAI 150
Query: 326 YLINMSV 332
Y I+ S+
Sbjct: 151 YEISKSL 157
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ V + L+G +IG+GG KI I+ SGA R+ + S +R + + G PD I A
Sbjct: 93 LLVSHNLMGTIIGRGGLKIKAIQDASGA--RLVAQKDMLPQSTERVVEVHGVPDEIGRAI 150
Query: 771 YLINMSV 777
Y I+ S+
Sbjct: 151 YEISKSL 157
>gi|17557820|ref|NP_505632.1| Protein C12D8.1, isoform a [Caenorhabditis elegans]
gi|3874254|emb|CAA98232.1| Protein C12D8.1, isoform a [Caenorhabditis elegans]
Length = 589
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK G+T+K+L E+G+KI D STPER ++G+ D ++RA T+ I E
Sbjct: 238 VGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRA----TERITE 293
Query: 63 FHKNQNKHLGGNG-------ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
K GG G ++ + VPA++CG +IGKGG IK I SGA +
Sbjct: 294 LVKKSTMQQGGGGNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCEL 353
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 161
+ D N+ E+ IKG A+ A + I + + D P P+R
Sbjct: 354 SRDPTGNADEKVFVIKGGKRAIEHAKHLIRIKVGDIAP---NTPFR 396
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK G+T+K+L E+G+KI D STPER ++G+ D ++RA T+ I E
Sbjct: 238 VGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRA----TERITE 293
Query: 508 FHKNQNKHLGGNG-------ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
K GG G ++ + VPA++CG +IGKGG IK I SGA +
Sbjct: 294 LVKKSTMQQGGGGNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCEL 353
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 606
+ D N+ E+ IKG A+ A + I + + D P P+R
Sbjct: 354 SRDPTGNADEKVFVIKGGKRAIEHAKHLIRIKVGDIAP---NTPFR 396
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 6 VGSIIGKSGETVKKLREESGSKIY-------ISDSSTPERIVTVIGSMDSLFRAFSLITK 58
G IIGKSG+T+++L+E+SG K+ +SD S P RI G + A L+ +
Sbjct: 144 CGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRIT---GDPQKIELAKQLVAE 200
Query: 59 NIEEFHKNQNK-----HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
+ H G G + ++VP S G IIGK G IK + +G +
Sbjct: 201 ILNSGGDGNGGSGLQMHHAGGGGGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKI 260
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
D P++ ER I G D + +A +I ++ S
Sbjct: 261 QFKPDDDPSTPERCAVIMGTRDQIYRATERITELVKKS 298
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG +IG+ G ++ ++ ++G ++ +S + P R+VT+ GS ++ A LI E
Sbjct: 59 VGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN---EV 115
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
++QN + + +P ++CG IIGK G I+ ++E SG + + D
Sbjct: 116 VARSQNPRPQYGFPRAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD 171
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 507
VG +IG+ G ++ ++ ++G ++ +S + P R+VT+ GS ++ A LI E
Sbjct: 59 VGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN---EV 115
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
++QN + + +P ++CG IIGK G I+ ++E SG + + D
Sbjct: 116 VARSQNPRPQYGFPRAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD 171
>gi|126723252|ref|NP_001075594.1| heterogeneous nuclear ribonucleoprotein K [Oryctolagus cuniculus]
gi|12230546|sp|O19049.1|HNRPK_RABIT RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|2644968|emb|CAA05815.1| hnRNP-K protein [Oryctolagus cuniculus]
Length = 463
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 21/185 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEE-------------------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+EE +H G+ +LRL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFD--CELRLLIHQSLAGGIIGV 162
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 602
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 163 KGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRA 222
Query: 603 IPYRP 607
PY P
Sbjct: 223 QPYDP 227
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 21/181 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EE-------------------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
EE +H G+ +LRL++ S G IIG G++
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFD--CELRLLIHQSLAGGIIGVKGAK 166
Query: 102 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 161
IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 167 IKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYD 226
Query: 162 P 162
P
Sbjct: 227 P 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|170084019|ref|XP_001873233.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650785|gb|EDR15025.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 318
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 100/169 (59%), Gaps = 3/169 (1%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V LRE++G K +S ER++TV G ++++ +A++
Sbjct: 3 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVTGPVEAVAKAYT 62
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + + + + S +RL++ + G+IIG+ G +IK I++ SGA +
Sbjct: 63 LIISQLVISNPSSPVTPSSSPSSLHTSIRLLISHNLMGTIIGRSGLKIKAIQDGSGARMV 122
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRP 607
+ +MLP STER V ++G P+A+ +A+ +I +++ +G T+ + P
Sbjct: 123 ASKEMLPQSTERVVEVQGSPEAIGRAVEEIGKCLLEDWERGLGTVLFNP 171
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V LRE++G K +S ER++TV G ++++ +A++LI +
Sbjct: 10 KDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVTGPVEAVAKAYTLIISQLV 69
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ + + S +RL++ + G+IIG+ G +IK I++ SGA + + +MLP
Sbjct: 70 ISNPSSPVTPSSSPSSLHTSIRLLISHNLMGTIIGRSGLKIKAIQDGSGARMVASKEMLP 129
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRP 162
STER V ++G P+A+ +A+ +I +++ +G T+ + P
Sbjct: 130 QSTERVVEVQGSPEAIGRAVEEIGKCLLEDWERGLGTVLFNP 171
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
N T+ +++P++++G +IG+ GTKI EIR++SG+ I I+K+ +D+ +R T+ GTP+
Sbjct: 228 NLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGSKISIAKTP--HDDTGERMFTIVGTPE 285
Query: 320 AIALAQYLINMSVE 333
A A +L+ +E
Sbjct: 286 ANEKALFLLYNQLE 299
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
N T+ +++P++++G +IG+ GTKI EIR++SG+ I I+K+ +D+ +R T+ GTP+
Sbjct: 228 NLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGSKISIAKTP--HDDTGERMFTIVGTPE 285
Query: 765 AIALAQYLINMSVE 778
A A +L+ +E
Sbjct: 286 ANEKALFLLYNQLE 299
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+P+ G IIG+ G++I IR SG+ + +A ++ ER I G P+A +A++
Sbjct: 236 IPSDMVGCIIGRSGTKITEIRRLSGSKISIAKTPHDDTGERMFTIVGTPEANEKALF 292
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+P+ G IIG+ G++I IR SG+ + +A ++ ER I G P+A +A++
Sbjct: 236 IPSDMVGCIIGRSGTKITEIRRLSGSKISIAKTPHDDTGERMFTIVGTPEANEKALF 292
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 425 PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STP 481
PQ P A+ QT R + VG IIG+SG + ++R SGSKI I+ + T
Sbjct: 217 PQSP--ASSQTAANLRTQNISIPSDMVGCIIGRSGTKITEIRRLSGSKISIAKTPHDDTG 274
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQ 523
ER+ T++G+ ++ +A L+ +E + + +G + Q
Sbjct: 275 ERMFTIVGTPEANEKALFLLYNQLE---SEKERRVGREAQQQ 313
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIG+SG + ++R SGSKI I+ + T ER+ T++G+ ++ +A L+ +E
Sbjct: 241 VGCIIGRSGTKITEIRRLSGSKISIAKTPHDDTGERMFTIVGTPEANEKALFLLYNQLE- 299
Query: 63 FHKNQNKHLGGNGESQ 78
+ + +G + Q
Sbjct: 300 --SEKERRVGREAQQQ 313
>gi|354500000|ref|XP_003512091.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Cricetulus griseus]
Length = 463
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|460789|emb|CAA51267.1| transformation upregulated nuclear protein [Homo sapiens]
Length = 464
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 419 GGFGGVP-----QGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKI 473
G FG P + ++ + T +R ++Q K G++IGK G+ +K LR + + +
Sbjct: 17 GEFGKRPAEDMEEEQDFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASV 76
Query: 474 YISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHK--------------------NQN 513
+ DSS PERI+++ ++++ I +EE + N
Sbjct: 77 SVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQ 136
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 573
+ G + + +L RL++ S G IIG G++IK +RE + ++ + + P+ST+R V
Sbjct: 137 HYKGSDFDCEL---RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 574 NIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
I G PD V + I I ++ +SP KG PY P
Sbjct: 194 LIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|281337729|gb|EFB13313.1| hypothetical protein PANDA_003005 [Ailuropoda melanoleuca]
Length = 453
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLI 328
AQYL+
Sbjct: 445 QNAQYLL 451
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLI 773
AQYL+
Sbjct: 445 QNAQYLL 451
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLI 56
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL 451
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLI 501
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL 451
>gi|61369343|gb|AAX43320.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
Length = 465
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|74177637|dbj|BAE38921.1| unnamed protein product [Mus musculus]
Length = 464
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLKSDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLKSDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|74144445|dbj|BAE36070.1| unnamed protein product [Mus musculus]
Length = 463
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|345329393|ref|XP_001506808.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Ornithorhynchus anatinus]
Length = 464
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|242020720|ref|XP_002430800.1| predicted protein [Pediculus humanus corporis]
gi|212515997|gb|EEB18062.1| predicted protein [Pediculus humanus corporis]
Length = 515
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 173/372 (46%), Gaps = 72/372 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAF 498
+R ++Q VG+IIG+ G T++++ +++ +++ + + E+ +T+ G+ D+ A
Sbjct: 116 LRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPDNCTNAC 175
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
I + ++ N NK GE I L+++ + G IIGKGG+ IK I + + + +
Sbjct: 176 KKILEVMQAEASNTNK-----GE---ISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKI 227
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V+S D+ + ER + +KG D +++A +I + S PQ PG
Sbjct: 228 TVSSINDINSFNLERIITVKGTIDNMSRAESEISAKLRQSYENDLQAM---APQTMMFPG 284
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
L +P+A ++ +G +S G GG+ + A + S +
Sbjct: 285 L-------------------HPMAMMSTNNMGYSSRPGAFGGVYGSG-APIPYSPIYPPA 324
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P+ GPSQ + Q+ T + +PN +GA+IG GT I I + S
Sbjct: 325 GPQQ--------------GPSQGGDSQE---TTFLFIPNSAVGAIIGTKGTHIRNIIRFS 367
Query: 737 GAMIRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI-----------------NMSV 777
GA ++I+ +E+ E +R +T+ GTP++ AQYLI ++V
Sbjct: 368 GASVKIASLEQEKGTEPPAERKVTIVGTPESQWKAQYLIFEKMREEGFIGSGNDDVKLTV 427
Query: 778 ELLRANLNGEGG 789
E+L + G+GG
Sbjct: 428 EILVGRIIGKGG 439
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 72/368 (19%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAFSLIT 57
+Q VG+IIG+ G T++++ +++ +++ + + E+ +T+ G+ D+ A I
Sbjct: 120 VQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPDNCTNACKKIL 179
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
+ ++ N NK GE I L+++ + G IIGKGG+ IK I + + + + V+S
Sbjct: 180 EVMQAEASNTNK-----GE---ISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSS 231
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG D +++A +I + S PQ PGL
Sbjct: 232 INDINSFNLERIITVKGTIDNMSRAESEISAKLRQSYENDLQA---MAPQTMMFPGL--- 285
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+P+A ++ +G +S G GG+ + A + S + P+
Sbjct: 286 ----------------HPMAMMSTNNMGYSSRPGAFGGVYGSG-APIPYSPIYPPAGPQQ 328
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
GPSQ + Q+ T + +PN +GA+IG GT I I + SGA +
Sbjct: 329 --------------GPSQGGDSQE---TTFLFIPNSAVGAIIGTKGTHIRNIIRFSGASV 371
Query: 296 RISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI-----------------NMSVELLR 336
+I+ +E+ E +R +T+ GTP++ AQYLI ++VE+L
Sbjct: 372 KIASLEQEKGTEPPAERKVTIVGTPESQWKAQYLIFEKMREEGFIGSGNDDVKLTVEILV 431
Query: 337 ANLNGEGG 344
+ G+GG
Sbjct: 432 GRIIGKGG 439
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 138/319 (43%), Gaps = 61/319 (19%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
++ +N + +I+ ++ N LIG +IGKGG I I + + + I +S ++ + +R
Sbjct: 184 AEASNTNKGEISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDINSFNLERI 243
Query: 312 ITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAP----LAGL 367
IT+ GT D ++ A+ I+ LR S +N+L + AP GL
Sbjct: 244 ITVKGTIDNMSRAESEISAK---LRQ---------------SYENDLQAMAPQTMMFPGL 285
Query: 368 NASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQG 427
+P+A ++PGA GG G G+ P G
Sbjct: 286 ---HPMAMMSTNNMGYSSRPGAF-----------------GGVYGSGAPIPYSPIYPPAG 325
Query: 428 PNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD------SSTP 481
P Q Q + VG+IIG G ++ + SG+ + I+ + P
Sbjct: 326 PQQGPSQGGDSQETTFLFIPNSAVGAIIGTKGTHIRNIIRFSGASVKIASLEQEKGTEPP 385
Query: 482 -ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL-IQLRLIVPASQCGSI 539
ER VT++G+ +S ++A LI F K + + G+G + + + ++V G I
Sbjct: 386 AERKVTIVGTPESQWKAQYLI------FEKMREEGFIGSGNDDVKLTVEILV-----GRI 434
Query: 540 IGKGGSQIKTIRETSGASV 558
IGKGG ++ ++ +G+ +
Sbjct: 435 IGKGGQNVRELQHATGSII 453
>gi|74195705|dbj|BAE39657.1| unnamed protein product [Mus musculus]
Length = 463
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++I KGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIVKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++I KGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIVKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSII KGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIVKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSII KGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIVKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSII K G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIVKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSII K G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIVKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|13384620|ref|NP_079555.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus]
gi|14165435|ref|NP_112552.1| heterogeneous nuclear ribonucleoprotein K isoform b [Homo sapiens]
gi|16923998|ref|NP_476482.1| heterogeneous nuclear ribonucleoprotein K [Rattus norvegicus]
gi|114625188|ref|XP_001155028.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 17
[Pan troglodytes]
gi|114625190|ref|XP_001155252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 21
[Pan troglodytes]
gi|126334813|ref|XP_001368466.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Monodelphis domestica]
gi|296189583|ref|XP_002742833.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6
[Callithrix jacchus]
gi|332236649|ref|XP_003267512.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Nomascus leucogenys]
gi|332236653|ref|XP_003267514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Nomascus leucogenys]
gi|338719650|ref|XP_003364038.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Equus
caballus]
gi|397475601|ref|XP_003809222.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2 [Pan
paniscus]
gi|397475605|ref|XP_003809224.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4 [Pan
paniscus]
gi|402897757|ref|XP_003911911.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Papio anubis]
gi|402897759|ref|XP_003911912.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Papio anubis]
gi|403300940|ref|XP_003941170.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Saimiri boliviensis boliviensis]
gi|410978215|ref|XP_003995491.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Felis catus]
gi|410978217|ref|XP_003995492.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Felis catus]
gi|426362133|ref|XP_004048235.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Gorilla gorilla gorilla]
gi|426362135|ref|XP_004048236.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Gorilla gorilla gorilla]
gi|48429097|sp|P61980.1|HNRPK_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K; AltName: Full=dC stretch-binding protein;
Short=CSBP
gi|48429103|sp|P61978.1|HNRPK_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K; AltName: Full=Transformation up-regulated
nuclear protein; Short=TUNP
gi|48429104|sp|P61979.1|HNRPK_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|241478|gb|AAB20770.1| heterogeneous nuclear ribonucleoprotein complex K [Homo sapiens]
gi|409389|dbj|BAA04566.1| dC-stretch binding protein [Rattus norvegicus]
gi|12847547|dbj|BAB27614.1| unnamed protein product [Mus musculus]
gi|15929044|gb|AAH14980.1| Heterogeneous nuclear ribonucleoprotein K [Homo sapiens]
gi|119583079|gb|EAW62675.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_a [Homo
sapiens]
gi|148709316|gb|EDL41262.1| mCG6893, isoform CRA_a [Mus musculus]
gi|149039793|gb|EDL93909.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_a [Rattus
norvegicus]
gi|380812324|gb|AFE78036.1| heterogeneous nuclear ribonucleoprotein K isoform b [Macaca
mulatta]
gi|410337441|gb|JAA37667.1| heterogeneous nuclear ribonucleoprotein K [Pan troglodytes]
gi|417401355|gb|JAA47567.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Desmodus
rotundus]
Length = 463
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|14165437|ref|NP_112553.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|14165439|ref|NP_002131.2| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|197101649|ref|NP_001126766.1| heterogeneous nuclear ribonucleoprotein K [Pongo abelii]
gi|388454448|ref|NP_001253875.1| heterogeneous nuclear ribonucleoprotein K [Macaca mulatta]
gi|114625208|ref|XP_001155079.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 18
[Pan troglodytes]
gi|114625210|ref|XP_001155315.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 22
[Pan troglodytes]
gi|149758457|ref|XP_001489114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Equus caballus]
gi|296189573|ref|XP_002742828.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Callithrix jacchus]
gi|296189575|ref|XP_002742829.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Callithrix jacchus]
gi|296189579|ref|XP_002742831.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Callithrix jacchus]
gi|301758414|ref|XP_002915066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Ailuropoda melanoleuca]
gi|332236647|ref|XP_003267511.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Nomascus leucogenys]
gi|332236651|ref|XP_003267513.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Nomascus leucogenys]
gi|344272026|ref|XP_003407837.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Loxodonta africana]
gi|395819298|ref|XP_003783031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Otolemur
garnettii]
gi|397475599|ref|XP_003809221.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1 [Pan
paniscus]
gi|397475603|ref|XP_003809223.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3 [Pan
paniscus]
gi|397475609|ref|XP_003809226.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6 [Pan
paniscus]
gi|402897753|ref|XP_003911909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Papio anubis]
gi|402897755|ref|XP_003911910.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Papio anubis]
gi|402897761|ref|XP_003911913.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Papio anubis]
gi|403300938|ref|XP_003941169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Saimiri boliviensis boliviensis]
gi|403300942|ref|XP_003941171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Saimiri boliviensis boliviensis]
gi|403300944|ref|XP_003941172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Saimiri boliviensis boliviensis]
gi|410978211|ref|XP_003995489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Felis catus]
gi|410978213|ref|XP_003995490.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Felis catus]
gi|426362129|ref|XP_004048233.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Gorilla gorilla gorilla]
gi|426362131|ref|XP_004048234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Gorilla gorilla gorilla]
gi|75056718|sp|Q5R5H8.1|HNRPK_PONAB RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|75075750|sp|Q4R4M6.1|HNRPK_MACFA RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|12653175|gb|AAH00355.1| Heterogeneous nuclear ribonucleoprotein K [Homo sapiens]
gi|13879427|gb|AAH06694.1| Hnrpk protein [Mus musculus]
gi|26347481|dbj|BAC37389.1| unnamed protein product [Mus musculus]
gi|38197650|gb|AAH61867.1| Hnrpk protein [Rattus norvegicus]
gi|48145659|emb|CAG33052.1| HNRPK [Homo sapiens]
gi|55732576|emb|CAH92988.1| hypothetical protein [Pongo abelii]
gi|58475965|gb|AAH89328.1| Hnrpk protein [Mus musculus]
gi|61359196|gb|AAX41682.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|67971214|dbj|BAE01949.1| unnamed protein product [Macaca fascicularis]
gi|74139420|dbj|BAE40851.1| unnamed protein product [Mus musculus]
gi|74141211|dbj|BAE35915.1| unnamed protein product [Mus musculus]
gi|74178242|dbj|BAE29905.1| unnamed protein product [Mus musculus]
gi|74183280|dbj|BAE22563.1| unnamed protein product [Mus musculus]
gi|74185026|dbj|BAE39121.1| unnamed protein product [Mus musculus]
gi|119583081|gb|EAW62677.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_c [Homo
sapiens]
gi|123979648|gb|ABM81653.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|123994453|gb|ABM84828.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|158256108|dbj|BAF84025.1| unnamed protein product [Homo sapiens]
gi|197692227|dbj|BAG70077.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|197692481|dbj|BAG70204.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|351696771|gb|EHA99689.1| Heterogeneous nuclear ribonucleoprotein K [Heterocephalus glaber]
gi|380812328|gb|AFE78038.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
gi|380812330|gb|AFE78039.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
gi|410337439|gb|JAA37666.1| heterogeneous nuclear ribonucleoprotein K [Pan troglodytes]
gi|417401379|gb|JAA47578.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Desmodus
rotundus]
Length = 464
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|380812326|gb|AFE78037.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
Length = 459
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 383 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 439
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 440 QNAQYLLQNSVK 451
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 383 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 439
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 440 QNAQYLLQNSVK 451
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 382 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 440
Query: 139 QAIY 142
A Y
Sbjct: 441 NAQY 444
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 382 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 440
Query: 584 QAIY 587
A Y
Sbjct: 441 NAQY 444
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 395 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 453
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 395 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 453
>gi|354499998|ref|XP_003512090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Cricetulus griseus]
Length = 464
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|313228809|emb|CBY17960.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 89/170 (52%), Gaps = 14/170 (8%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDS-----LFRA 497
R ++ K G++IGK G T+K LR + ++ + D+ PER++ + DS + +
Sbjct: 137 RFLIPSKMAGAVIGKGGTTIKSLRSDFACQLNVPDAQGPERVLRFV-CEDSNVSPLIEKV 195
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
+L+ ++ E ++ Q I +R++V S+ G++IG G IK +R+ +G
Sbjct: 196 GNLLRNDMVERNRAQ--------ADSDIDMRMLVHQSKAGAVIGFKGETIKGLRDKTGCK 247
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ V D P+S++R + + G PD + +I LI+ D PPKG + P
Sbjct: 248 INVYQDPAPHSSDRLIKVAGQPDKIATCFGEILLILNDIPPKGFVQEFDP 297
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDS-----LFRAFSLITK 58
K G++IGK G T+K LR + ++ + D+ PER++ + DS + + +L+
Sbjct: 143 KMAGAVIGKGGTTIKSLRSDFACQLNVPDAQGPERVLRFV-CEDSNVSPLIEKVGNLLRN 201
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
++ E ++ Q I +R++V S+ G++IG G IK +R+ +G + V D
Sbjct: 202 DMVERNRAQ--------ADSDIDMRMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVYQD 253
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+S++R + + G PD + +I LI+ D PPKG + P
Sbjct: 254 PAPHSSDRLIKVAGQPDKIATCFGEILLILNDIPPKGFVQEFDP 297
>gi|126330639|ref|XP_001363707.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Monodelphis domestica]
gi|395515329|ref|XP_003761858.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Sarcophilus
harrisii]
Length = 471
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 395 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 451
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 452 QNAQYLLQNSVK 463
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 395 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 451
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 452 QNAQYLLQNSVK 463
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 394 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 452
Query: 139 QAIY 142
A Y
Sbjct: 453 NAQY 456
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 394 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 452
Query: 584 QAIY 587
A Y
Sbjct: 453 NAQY 456
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 407 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 465
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 407 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 465
>gi|1083569|pir||A54143 kappa-B motif-binding phosphoprotein - mouse
Length = 464
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|432109005|gb|ELK33475.1| Heterogeneous nuclear ribonucleoprotein K [Myotis davidii]
Length = 438
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 331
L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I AQYL+ S
Sbjct: 372 LAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNAQYLLQNS 428
Query: 332 VE 333
V+
Sbjct: 429 VK 430
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I AQYL+ S
Sbjct: 372 LAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNAQYLLQNS 428
Query: 777 VE 778
V+
Sbjct: 429 VK 430
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 374 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 432
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 374 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 432
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 92 GSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
GSIIGKGG +IK IR SGAS+ + + L S +R + I G D + A Y
Sbjct: 374 GSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 423
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 537 GSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
GSIIGKGG +IK IR SGAS+ + + L S +R + I G D + A Y
Sbjct: 374 GSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 423
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 229/536 (42%), Gaps = 110/536 (20%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRI-SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 331
+G+VIGKGG + +IRK SG IR+ + +D I + G D A+ + L+ +S
Sbjct: 176 VGSVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEG--DVWAIKKALLAVS 233
Query: 332 VEL-------LRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
L R E + D D+ L ++ L L +S+ + A
Sbjct: 234 RRLQDCPPSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIFA--------- 284
Query: 385 TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRH 444
+ + +L +D+L P N+ V ++
Sbjct: 285 ---------SGIHSLSIDADMLP--------------------PVDTNVAQQDVVFKI-- 313
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGS--MDSLF----R 496
+ +G +IGK G V+ L+ ESG+ + + S T ER++++ S ++S + +
Sbjct: 314 LCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYSPAQK 373
Query: 497 AFSLITKN-----IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
A L+ IE++ ++ +K + RL+VP++Q G ++GKGG I IR
Sbjct: 374 AVVLVFSRSVDVAIEKWQESSSK-------GSPVVARLVVPSNQVGCVLGKGGVIISEIR 426
Query: 552 ETSGASV-YVASDMLPNS---TEREVNIKGVPDAVTQAIYQIC------LIMVDSPPKGA 601
+ +G ++ ++SD +PN ++ V I G V A+Y + L +V P G
Sbjct: 427 KVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFLV---PYGR 483
Query: 602 TIPYRPLPQNAGGPGLIGNQFG--MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 659
PL ++ +G G MQ+S + D LGL + GL
Sbjct: 484 VRDTAPLVRSTP----VGTSHGSFMQHSTAQSSD----------DLGLSHSLDSPSSPGL 529
Query: 660 NAA-ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELI 718
+L+ ++S + + + H + G KT N T E+ VP+++I
Sbjct: 530 WPPQSLSGISSRAIS------DAGRGLPSHRSGVQLGSGNKTAIVTNT-TVEIVVPDDVI 582
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
V G+ GT + +R+ISGA + + E + +NDR I ++GTPD AQ L++
Sbjct: 583 SLVYGENGTNLTRLRQISGAKVIV---HEPDPITNDRLIVISGTPDETQAAQSLLH 635
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 60/351 (17%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGS--MDSLF----RAFSLI 56
+G +IGK G V+ L+ ESG+ + + S T ER++++ S ++S + +A L+
Sbjct: 319 RIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYSPAQKAVVLV 378
Query: 57 TKN-----IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
IE++ ++ +K + RL+VP++Q G ++GKGG I IR+ +G
Sbjct: 379 FSRSVDVAIEKWQESSSK-------GSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTGT 431
Query: 112 SV-YVASDMLPNS---TEREVNIKGVPDAVTQAIYQIC------LIMVDSPPKGATIPYR 161
++ ++SD +PN ++ V I G V A+Y + L +V P G
Sbjct: 432 NIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFLV---PYGRVRDTA 488
Query: 162 PLPQNAGGPGLIGNQFG--MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAA-A 218
PL ++ +G G MQ+S + D LGL + GL +
Sbjct: 489 PLVRSTP----VGTSHGSFMQHSTAQSSD----------DLGLSHSLDSPSSPGLWPPQS 534
Query: 219 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 278
L+ ++S + + + H + G KT N T E+ VP+++I V G
Sbjct: 535 LSGISSRAIS------DAGRGLPSHRSGVQLGSGNKTAIVTNT-TVEIVVPDDVISLVYG 587
Query: 279 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+ GT + +R+ISGA + + E + +NDR I ++GTPD AQ L++
Sbjct: 588 ENGTNLTRLRQISGAKVIV---HEPDPITNDRLIVISGTPDETQAAQSLLH 635
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 144/349 (41%), Gaps = 75/349 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAF- 498
R + +G +IGKSG +K+L++ +G KI + + S +P+R+VTVIGS R F
Sbjct: 60 FRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRVFL 119
Query: 499 ----------SLITKNIEEFHKNQNKHLGGNGE---------SQLIQLRLIVPASQCGSI 539
+K E K + L E ++ RL+ +Q GS+
Sbjct: 120 EQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVGSV 179
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNS---TEREVNIKGVPDAVTQAIYQICLIMVDS 596
IGKGG ++ IR+ SG + V +D LP ++ + I+G A+ +A+ + + D
Sbjct: 180 IGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQDC 239
Query: 597 PP--KGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA-PDMGNNPLAGLAALGLGGNSGG 653
PP K P + P L + +NS++ P N +G+ +L
Sbjct: 240 PPSEKRTVRPAEAVIHET-LPDLHMDHILQRNSVLPILPSSSNIFASGIHSL-------- 290
Query: 654 GMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTV 713
++A L P TN Q + ++
Sbjct: 291 ----SIDADML-------------------------------PPVDTNVAQQDVVFKILC 315
Query: 714 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
N+ IG VIGKGGT + ++ SGA + + S ++R I++T +
Sbjct: 316 ANDRIGGVIGKGGTIVRALQNESGATVSVGPSV---TGCDERLISITAS 361
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 142/345 (41%), Gaps = 75/345 (21%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAF----- 53
+G +IGKSG +K+L++ +G KI + + S +P+R+VTVIGS R F
Sbjct: 64 CHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRVFLEQNS 123
Query: 54 ------SLITKNIEEFHKNQNKHLGGNGE---------SQLIQLRLIVPASQCGSIIGKG 98
+K E K + L E ++ RL+ +Q GS+IGKG
Sbjct: 124 GASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVGSVIGKG 183
Query: 99 GSQIKTIRETSGASVYVASDMLPNS---TEREVNIKGVPDAVTQAIYQICLIMVDSPP-- 153
G ++ IR+ SG + V +D LP ++ + I+G A+ +A+ + + D PP
Sbjct: 184 GKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQDCPPSE 243
Query: 154 KGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA-PDMGNNPLAGLAALGLGGNSGGGMGG 212
K P + P L + +NS++ P N +G+ +L
Sbjct: 244 KRTVRPAEAVIHET-LPDLHMDHILQRNSVLPILPSSSNIFASGIHSL------------ 290
Query: 213 GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNEL 272
++A L P TN Q + ++ N+
Sbjct: 291 SIDADML-------------------------------PPVDTNVAQQDVVFKILCANDR 319
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
IG VIGKGGT + ++ SGA + + S ++R I++T +
Sbjct: 320 IGGVIGKGGTIVRALQNESGATVSVGPSV---TGCDERLISITAS 361
>gi|334333295|ref|XP_003341704.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Monodelphis domestica]
Length = 470
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 395 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 451
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 452 QNAQYLLQNSVK 463
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 395 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 451
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 452 QNAQYLLQNSVK 463
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 394 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 452
Query: 139 QAIY 142
A Y
Sbjct: 453 NAQY 456
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 394 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 452
Query: 584 QAIY 587
A Y
Sbjct: 453 NAQY 456
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 407 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 465
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 407 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 465
>gi|149039794|gb|EDL93910.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_b [Rattus
norvegicus]
Length = 386
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 98/341 (28%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG---------- 489
R++ ++GSIIG G+ K+LR E+ SKI IS++ ER+VT+
Sbjct: 45 FRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSED 104
Query: 490 -------SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+ D+LFR + ++ H Q I +R++VP+ Q G +IGK
Sbjct: 105 TGDLISPAQDALFRVHDRVLAEDLRMDEDLEDH-------QQITVRMLVPSDQIGCVIGK 157
Query: 543 GGSQIKTIRETSGASVYV-ASDMLP----NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
GG I+ +R +GA + V +S+ LP NS E + I G V +A+YQ+ + D+P
Sbjct: 158 GGQVIQNLRSETGAQIRVLSSEHLPPCALNSDEL-LQITGEGAVVKKALYQVAARLHDNP 216
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGN------NPLAGLAALGLGGNS 651
+ Q+ L+ +P + NP AG +G+
Sbjct: 217 SRS------------------------QHQLLSSPSIFRSGAGLVNPHAGTQVMGV---- 248
Query: 652 GGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEM 711
+ + AS + DG S+ ++ ++ + +
Sbjct: 249 ---------TSLMGPYASYK---------------------SDGRSRSSSVKEFAV--RL 276
Query: 712 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 752
P E +GAVIGKGG I ++R+ SGA I++ ++ E +D
Sbjct: 277 VCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDC 317
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 143/333 (42%), Gaps = 98/333 (29%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG-----------------S 45
++GSIIG G+ K+LR E+ SKI IS++ ER+VT+ +
Sbjct: 53 KIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPA 112
Query: 46 MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTI 105
D+LFR + ++ H Q I +R++VP+ Q G +IGKGG I+ +
Sbjct: 113 QDALFRVHDRVLAEDLRMDEDLEDH-------QQITVRMLVPSDQIGCVIGKGGQVIQNL 165
Query: 106 RETSGASVYV-ASDMLP----NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
R +GA + V +S+ LP NS E + I G V +A+YQ+ + D+P +
Sbjct: 166 RSETGAQIRVLSSEHLPPCALNSDEL-LQITGEGAVVKKALYQVAARLHDNPSRS----- 219
Query: 161 RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGN------NPLAGLAALGLGGNSGGGMGGGL 214
Q+ L+ +P + NP AG +G+
Sbjct: 220 -------------------QHQLLSSPSIFRSGAGLVNPHAGTQVMGV------------ 248
Query: 215 NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 274
+ + AS + DG S+ ++ ++ + + P E +G
Sbjct: 249 -TSLMGPYASYK---------------------SDGRSRSSSVKEFAV--RLVCPTENVG 284
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 307
AVIGKGG I ++R+ SGA I++ ++ E +D
Sbjct: 285 AVIGKGGGIIKQLRQESGASIKVDSAAAEGDDC 317
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 142/341 (41%), Gaps = 54/341 (15%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS--NDRTITM 314
+ QIT M VP++ IG VIGKGG I +R +GA IR+ S + +D + +
Sbjct: 135 EDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQI 194
Query: 315 TGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLA 374
TG + A Y + A L+ + S SS + S A L NP A
Sbjct: 195 TGEGAVVKKALYQVA-------ARLH-DNPSRSQHQLLSSPSIFRSGAGLV-----NPHA 241
Query: 375 AALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQ 434
Q++ G++ L+G +S G S ++++
Sbjct: 242 G-----TQVM----------------GVTSLMGPYASYKSDGRS----------RSSSVK 270
Query: 435 TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSL 494
V R + + VG++IGK G +K+LR+ESG+ I + ++ + S
Sbjct: 271 EFAV----RLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEA 326
Query: 495 FRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
F S ++ ++ RL+VP+S+ G +IGKGGS I +R ++
Sbjct: 327 FEDQSPTIDATMRLQPRSSEKTEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNST 386
Query: 555 GASVYVAS-DMLPNSTERE---VNIKGVPDAVTQAIYQICL 591
AS+ V S + LP + V I G + A+ Q+ +
Sbjct: 387 RASIRVLSKENLPKVASEDDEMVQITGDANVAANALLQVLM 427
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
VG++IGK G +K+LR+ESG+ I + ++ + S F S
Sbjct: 283 VGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPTIDATMRLQP 342
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS-DMLPNST 124
++ ++ RL+VP+S+ G +IGKGGS I +R ++ AS+ V S + LP
Sbjct: 343 RSSEKTEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVA 402
Query: 125 ERE---VNIKGVPDAVTQAIYQICL 146
+ V I G + A+ Q+ +
Sbjct: 403 SEDDEMVQITGDANVAANALLQVLM 427
>gi|256071468|ref|XP_002572062.1| hypothetical protein [Schistosoma mansoni]
Length = 453
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMD---SLFRAF 498
+R ++ G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + S+ R
Sbjct: 29 IRFLIPGRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDV 88
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQ------------------LIQLRLIVPASQCGSII 540
K+I + K + G S+ +I R++V SQ GS+I
Sbjct: 89 CPKLKDIMNAKLSDPKRIMGTQGSRRRPRRSEDPERDDEEDENMIDFRILVHESQAGSVI 148
Query: 541 GKGGSQIKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
G+GG +IK +R+ V ML P ST+R V + PD V Q + + + +PP+
Sbjct: 149 GRGGERIKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPR 208
Query: 600 GATIPY 605
G Y
Sbjct: 209 GRREDY 214
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMD---SLFRAFSLITKN 59
G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + S+ R K+
Sbjct: 35 GRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKD 94
Query: 60 IEEFHKNQNKHLGGNGESQ------------------LIQLRLIVPASQCGSIIGKGGSQ 101
I + K + G S+ +I R++V SQ GS+IG+GG +
Sbjct: 95 IMNAKLSDPKRIMGTQGSRRRPRRSEDPERDDEEDENMIDFRILVHESQAGSVIGRGGER 154
Query: 102 IKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
IK +R+ V ML P ST+R V + PD V Q + + + +PP+G Y
Sbjct: 155 IKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPRGRREDY 214
>gi|17557818|ref|NP_505633.1| Protein C12D8.1, isoform b [Caenorhabditis elegans]
gi|3874255|emb|CAA98233.1| Protein C12D8.1, isoform b [Caenorhabditis elegans]
Length = 611
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK G+T+K+L E+G+KI D STPER ++G+ D ++RA T+ I E
Sbjct: 260 VGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRA----TERITE 315
Query: 63 FHKNQNKHLGGNG-------ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
K GG G ++ + VPA++CG +IGKGG IK I SGA +
Sbjct: 316 LVKKSTMQQGGGGNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCEL 375
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 161
+ D N+ E+ IKG A+ A + I + + D P P+R
Sbjct: 376 SRDPTGNADEKVFVIKGGKRAIEHAKHLIRIKVGDIAP---NTPFR 418
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK G+T+K+L E+G+KI D STPER ++G+ D ++RA T+ I E
Sbjct: 260 VGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRA----TERITE 315
Query: 508 FHKNQNKHLGGNG-------ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
K GG G ++ + VPA++CG +IGKGG IK I SGA +
Sbjct: 316 LVKKSTMQQGGGGNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCEL 375
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 606
+ D N+ E+ IKG A+ A + I + + D P P+R
Sbjct: 376 SRDPTGNADEKVFVIKGGKRAIEHAKHLIRIKVGDIAP---NTPFR 418
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 6 VGSIIGKSGETVKKLREESGSKIY-------ISDSSTPERIVTVIGSMDSLFRAFSLITK 58
G IIGKSG+T+++L+E+SG K+ +SD S P RI G + A L+ +
Sbjct: 166 CGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRIT---GDPQKIELAKQLVAE 222
Query: 59 NIEEFHKNQNK-----HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
+ H G G + ++VP S G IIGK G IK + +G +
Sbjct: 223 ILNSGGDGNGGSGLQMHHAGGGGGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKI 282
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
D P++ ER I G D + +A +I
Sbjct: 283 QFKPDDDPSTPERCAVIMGTRDQIYRATERI 313
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG +IG+ G ++ ++ ++G ++ +S + P R+VT+ GS ++ A LI E
Sbjct: 81 VGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN---EV 137
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
++QN + + +P ++CG IIGK G I+ ++E SG + + D
Sbjct: 138 VARSQNPRPQYGFPRAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD 193
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 507
VG +IG+ G ++ ++ ++G ++ +S + P R+VT+ GS ++ A LI E
Sbjct: 81 VGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN---EV 137
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
++QN + + +P ++CG IIGK G I+ ++E SG + + D
Sbjct: 138 VARSQNPRPQYGFPRAQTTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD 193
>gi|119583080|gb|EAW62676.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_b [Homo
sapiens]
Length = 462
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 387 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 443
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 444 QNAQYLLQNSVK 455
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 387 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 443
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 444 QNAQYLLQNSVK 455
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 386 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 444
Query: 139 QAIY 142
A Y
Sbjct: 445 NAQY 448
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 386 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 444
Query: 584 QAIY 587
A Y
Sbjct: 445 NAQY 448
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 399 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 457
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 399 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 457
>gi|119583083|gb|EAW62679.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_e [Homo
sapiens]
Length = 464
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 62 EFHKNQNKHLGGNGES-----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
E+H + + GG G +I ++ +P GSIIGKGG +IK IR SGAS+ +
Sbjct: 366 EYHSYYS-YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI- 423
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIY 142
+ L S +R + I G D + A Y
Sbjct: 424 DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 507 EFHKNQNKHLGGNGES-----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
E+H + + GG G +I ++ +P GSIIGKGG +IK IR SGAS+ +
Sbjct: 366 EYHSYYS-YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI- 423
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIY 587
+ L S +R + I G D + A Y
Sbjct: 424 DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|119583082|gb|EAW62678.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_d [Homo
sapiens]
gi|119583085|gb|EAW62681.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_d [Homo
sapiens]
Length = 463
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 62 EFHKNQNKHLGGNGES-----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
E+H + + GG G +I ++ +P GSIIGKGG +IK IR SGAS+ +
Sbjct: 366 EYHSYYS-YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI- 423
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIY 142
+ L S +R + I G D + A Y
Sbjct: 424 DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 507 EFHKNQNKHLGGNGES-----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
E+H + + GG G +I ++ +P GSIIGKGG +IK IR SGAS+ +
Sbjct: 366 EYHSYYS-YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI- 423
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIY 587
+ L S +R + I G D + A Y
Sbjct: 424 DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|353229707|emb|CCD75878.1| hypothetical protein Smp_005860.1 [Schistosoma mansoni]
Length = 437
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMD---SLFRAF 498
+R ++ G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + S+ R
Sbjct: 29 IRFLIPGRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDV 88
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQ------------------LIQLRLIVPASQCGSII 540
K+I + K + G S+ +I R++V SQ GS+I
Sbjct: 89 CPKLKDIMNAKLSDPKRIMGTQGSRRRPRRSEDPERDDEEDENMIDFRILVHESQAGSVI 148
Query: 541 GKGGSQIKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
G+GG +IK +R+ V ML P ST+R V + PD V Q + + + +PP+
Sbjct: 149 GRGGERIKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPR 208
Query: 600 GATIPY 605
G Y
Sbjct: 209 GRREDY 214
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMD---SLFRAFSLITKN 59
G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + S+ R K+
Sbjct: 35 GRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKD 94
Query: 60 IEEFHKNQNKHLGGNGESQ------------------LIQLRLIVPASQCGSIIGKGGSQ 101
I + K + G S+ +I R++V SQ GS+IG+GG +
Sbjct: 95 IMNAKLSDPKRIMGTQGSRRRPRRSEDPERDDEEDENMIDFRILVHESQAGSVIGRGGER 154
Query: 102 IKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
IK +R+ V ML P ST+R V + PD V Q + + + +PP+G Y
Sbjct: 155 IKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPRGRREDY 214
>gi|291358560|gb|ADD96765.1| heterogeneous nuclear ribonuclear protein K [Capra hircus]
Length = 441
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 366 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 422
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 423 QNAQYLLQNSVK 434
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 366 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 422
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 423 QNAQYLLQNSVK 434
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 365 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 423
Query: 139 QAIY 142
A Y
Sbjct: 424 NAQY 427
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 365 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 423
Query: 584 QAIY 587
A Y
Sbjct: 424 NAQY 427
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 378 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 436
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 378 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 436
>gi|268558150|ref|XP_002637065.1| Hypothetical protein CBG09562 [Caenorhabditis briggsae]
Length = 590
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK G+T+K+L E+G+KI D + PER ++G+ D ++RA IT+ + +
Sbjct: 239 VGIIIGKQGDTIKRLAMETGTKIQFKPDEDPNAPERCAIIMGTRDQIYRATERITELVRK 298
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+ Q + G+ ++ + VPA++CG +IGKGG IK I SGA ++ D N
Sbjct: 299 SAQQQGGSMTGSAGAESSTFFMSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDATGN 358
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 161
E+ IKG + A + I + + D P P+R
Sbjct: 359 VEEKVFVIKGGKRQIEHAKHLIRIKVGDIAP---NTPFR 394
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK G+T+K+L E+G+KI D + PER ++G+ D ++RA IT+ + +
Sbjct: 239 VGIIIGKQGDTIKRLAMETGTKIQFKPDEDPNAPERCAIIMGTRDQIYRATERITELVRK 298
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
+ Q + G+ ++ + VPA++CG +IGKGG IK I SGA ++ D N
Sbjct: 299 SAQQQGGSMTGSAGAESSTFFMSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDATGN 358
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 606
E+ IKG + A + I + + D P P+R
Sbjct: 359 VEEKVFVIKGGKRQIEHAKHLIRIKVGDIAP---NTPFR 394
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSK-IYISDSST---PERIVTVIGSMDSLFRAFSLITKNI- 60
G IIGK+GET+++L+E+SG K + + DS T + + + G + A L+ + +
Sbjct: 146 CGLIIGKAGETIRQLQEKSGCKMVLVQDSQTVGDQAKPLRITGDPQKIEIAKQLVAEILN 205
Query: 61 -----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+Q +H+G G S + ++VP S G IIGK G IK + +G +
Sbjct: 206 SGPDGSGGGGHQVQHIGSGGAS--ARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF 263
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
D PN+ ER I G D + +A +I ++ S
Sbjct: 264 KPDEDPNAPERCAIIMGTRDQIYRATERITELVRKS 299
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+ G ++ ++ ++G ++ +S S R VT+ G+ ++ A LI + +
Sbjct: 62 VGIVIGRGGSEIQGIQAKAGCRVQMSSDSDNSGVRQVTLEGTRANVEAAKVLINEVVARS 121
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ ++ G +Q + + +P ++CG IIGK G I+ ++E SG + + D
Sbjct: 122 QTPRPQY--GFPRAQNT-IDIAIPPNRCGLIIGKAGETIRQLQEKSGCKMVLVQD 173
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+ G ++ ++ ++G ++ +S S R VT+ G+ ++ A LI + +
Sbjct: 62 VGIVIGRGGSEIQGIQAKAGCRVQMSSDSDNSGVRQVTLEGTRANVEAAKVLINEVVARS 121
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
+ ++ G +Q + + +P ++CG IIGK G I+ ++E SG + + D
Sbjct: 122 QTPRPQY--GFPRAQNT-IDIAIPPNRCGLIIGKAGETIRQLQEKSGCKMVLVQD 173
>gi|77736071|ref|NP_001029734.1| heterogeneous nuclear ribonucleoprotein K [Bos taurus]
gi|426219903|ref|XP_004004157.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Ovis aries]
gi|426219905|ref|XP_004004158.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Ovis aries]
gi|426224282|ref|XP_004006301.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
gi|426256846|ref|XP_004022048.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Ovis aries]
gi|108860777|sp|Q3T0D0.1|HNRPK_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|74354615|gb|AAI02451.1| Heterogeneous nuclear ribonucleoprotein K [Bos taurus]
gi|296484523|tpg|DAA26638.1| TPA: heterogeneous nuclear ribonucleoprotein K [Bos taurus]
Length = 464
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|392513715|ref|NP_001254774.1| heterogeneous nuclear ribonucleoprotein K [Sus scrofa]
Length = 463
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|440905354|gb|ELR55741.1| Heterogeneous nuclear ribonucleoprotein K [Bos grunniens mutus]
Length = 464
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +I SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIHHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +I SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIHHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK I SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIHHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK I SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIHHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++ ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIHHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++ ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIHHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|148709317|gb|EDL41263.1| mCG6893, isoform CRA_b [Mus musculus]
gi|148709318|gb|EDL41264.1| mCG6893, isoform CRA_b [Mus musculus]
Length = 368
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
>gi|392571215|gb|EIW64387.1| cytoplasmic protein [Trametes versicolor FP-101664 SS1]
Length = 325
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V +LR+++G K +S ER++TV G+++ + +A+S
Sbjct: 30 LRALVSTKDAGVIIGKAGKNVAELRDQTGVKAGVSKVIPGVHERVLTVTGTVEGVAKAYS 89
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + + + S +RL++ + GS+IG+ G +IK I+++SGA +
Sbjct: 90 LIVSQL--VSASPSSPTMSPTSSPTTAIRLLISHNLMGSVIGRNGLKIKAIQDSSGARMV 147
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 607
+ DMLP STER V ++G +++ +AI +I +++ +G T+ + P
Sbjct: 148 ASKDMLPQSTERIVEVQGSSESIGRAIEEIGRCLLEDWERGVGTVLFHP 196
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V +LR+++G K +S ER++TV G+++ + +A+SLI +
Sbjct: 37 KDAGVIIGKAGKNVAELRDQTGVKAGVSKVIPGVHERVLTVTGTVEGVAKAYSLIVSQL- 95
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ + S +RL++ + GS+IG+ G +IK I+++SGA + + DMLP
Sbjct: 96 -VSASPSSPTMSPTSSPTTAIRLLISHNLMGSVIGRNGLKIKAIQDSSGARMVASKDMLP 154
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
STER V ++G +++ +AI +I +++ +G T+ + P
Sbjct: 155 QSTERIVEVQGSSESIGRAIEEIGRCLLEDWERGVGTVLFHP 196
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
N T+ +++P++++G +IG+ GTKI EIR++SG+ I I+K E +++ +R T+ GTP+
Sbjct: 235 NLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAK--EPHDETGERMFTIVGTPE 292
Query: 320 AIALAQYLINMSVE 333
A A +L+ +E
Sbjct: 293 ANEKALFLLYNQLE 306
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
N T+ +++P++++G +IG+ GTKI EIR++SG+ I I+K E +++ +R T+ GTP+
Sbjct: 235 NLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAK--EPHDETGERMFTIVGTPE 292
Query: 765 AIALAQYLINMSVE 778
A A +L+ +E
Sbjct: 293 ANEKALFLLYNQLE 306
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 39/185 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ +GS+IG++G +K +++ SG+++ S P ERIV V GS +S+ RA
Sbjct: 115 IRLLISHNLMGSVIGRNGLKIKAIQDSSGARMVASKDMLPQSTERIVEVQGSSESIGRAI 174
Query: 499 SLITKNIEE----------FHKNQNKHLGG----------NGE----------------S 522
I + + E FH + G NG+ +
Sbjct: 175 EEIGRCLLEDWERGVGTVLFHPGAGEERSGRRTHPTNRRSNGDVRRTSPSPSSPSSSPPT 234
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
L + +P+ G IIG+ G++I IR SG+ + +A + + ER I G P+A
Sbjct: 235 NLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEAN 294
Query: 583 TQAIY 587
+A++
Sbjct: 295 EKALF 299
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 39/176 (22%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
+GS+IG++G +K +++ SG+++ S P ERIV V GS +S+ RA I + + E
Sbjct: 124 MGSVIGRNGLKIKAIQDSSGARMVASKDMLPQSTERIVEVQGSSESIGRAIEEIGRCLLE 183
Query: 63 ----------FHKNQNKHLGG----------NGE----------------SQLIQLRLIV 86
FH + G NG+ + L + +
Sbjct: 184 DWERGVGTVLFHPGAGEERSGRRTHPTNRRSNGDVRRTSPSPSSPSSSPPTNLRTQNISI 243
Query: 87 PASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
P+ G IIG+ G++I IR SG+ + +A + + ER I G P+A +A++
Sbjct: 244 PSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALF 299
>gi|426256848|ref|XP_004022049.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Ovis aries]
Length = 466
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVELLR 336
AQYL+ SV+ ++
Sbjct: 445 QNAQYLLQNSVKHVK 459
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVELLR 781
AQYL+ SV+ ++
Sbjct: 445 QNAQYLLQNSVKHVK 459
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKHVK 459
Query: 65 KNQNKHL 71
+ K
Sbjct: 460 QYSGKFF 466
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKHVK 459
Query: 510 KNQNKHL 516
+ K
Sbjct: 460 QYSGKFF 466
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 159/357 (44%), Gaps = 51/357 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIV----------TVIG 489
R ++ ++VG IIG+ GE VKK+ EE+ S+I I D S TPER+V T+
Sbjct: 52 FRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDATISP 111
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD + + I + I+E + Q G RL++ Q GS+IGK G+ IK+
Sbjct: 112 AMDGILKVHKRIIEGIDEVGRTQQAAGGPT------ITRLLLAGIQSGSLIGKQGATIKS 165
Query: 550 IRETSG-ASVYVASDMLPN---STEREVNIKGVPDAVTQA----IYQICLIMVDSPPKGA 601
I+E SG A+ V S+ +P + ++ + I+G P V +A + + +VD +
Sbjct: 166 IQENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRKFLVDR----S 221
Query: 602 TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNA 661
+P + + NQ M+ +L P +N + L NSG G G
Sbjct: 222 VLPMYEMNMSK------TNQSQMEQNLSHQP-WSHNQTSSLP------NSGSGFGNNSKY 268
Query: 662 AALAALASSQLKTNHMPRNQNQNQ--NQHNRNNRDG---PSQKTNQQQNQITKEMTVPNE 716
A + + +P + + N + R+ G P+ Q+++ M +P
Sbjct: 269 TPTAPPHDNYYAPSDLPPETHSHHGLNMYGRDPLGGHSVPNAAPAPVITQVSQRMQIPLS 328
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
AVIG G I R+ SGA+I I E + T+ + GT + AQ LI
Sbjct: 329 YADAVIGTNGANISYCRRNSGAIITI---EETRGVPGEMTVEIHGTASQVQTAQQLI 382
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 51/350 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIV----------TVIGSMDSLFR 51
++VG IIG+ GE VKK+ EE+ S+I I D S TPER+V T+ +MD + +
Sbjct: 59 QKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDATISPAMDGILK 118
Query: 52 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG- 110
I + I+E + Q G RL++ Q GS+IGK G+ IK+I+E SG
Sbjct: 119 VHKRIIEGIDEVGRTQQAAGGPT------ITRLLLAGIQSGSLIGKQGATIKSIQENSGV 172
Query: 111 ASVYVASDMLPN---STEREVNIKGVPDAVTQA----IYQICLIMVDSPPKGATIPYRPL 163
A+ V S+ +P + ++ + I+G P V +A + + +VD + +P +
Sbjct: 173 AAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRKFLVDR----SVLPMYEM 228
Query: 164 PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALA 223
+ NQ M+ +L P +N + L NSG G G A
Sbjct: 229 NMSK------TNQSQMEQNLSHQP-WSHNQTSSLP------NSGSGFGNNSKYTPTAPPH 275
Query: 224 SSQLKTNHMPRNQNQNQ--NQHNRNNRDG---PSQKTNQQQNQITKEMTVPNELIGAVIG 278
+ + +P + + N + R+ G P+ Q+++ M +P AVIG
Sbjct: 276 DNYYAPSDLPPETHSHHGLNMYGRDPLGGHSVPNAAPAPVITQVSQRMQIPLSYADAVIG 335
Query: 279 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
G I R+ SGA+I I E + T+ + GT + AQ LI
Sbjct: 336 TNGANISYCRRNSGAIITI---EETRGVPGEMTVEIHGTASQVQTAQQLI 382
>gi|59381084|gb|AAW84289.1| heterogeneous nuclear ribonucleoprotein K transcript variant [Homo
sapiens]
Length = 464
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISTDIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISTDIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|226473418|emb|CAX71394.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 452
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ +
Sbjct: 29 IRFLIPGRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDV 88
Query: 502 TKNIEEF---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSII 540
+++ +N++ + + +I R++V SQ GS+I
Sbjct: 89 CPKLKDIMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVI 148
Query: 541 GKGGSQIKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
G+GG +IK +R+ V ML P ST+R V + PD V Q + + + +PP+
Sbjct: 149 GRGGERIKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPR 208
Query: 600 GATIPY 605
G Y
Sbjct: 209 GRREDY 214
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ + +++
Sbjct: 35 GRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKD 94
Query: 63 F---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
+N++ + + +I R++V SQ GS+IG+GG +
Sbjct: 95 IMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVIGRGGER 154
Query: 102 IKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
IK +R+ V ML P ST+R V + PD V Q + + + +PP+G Y
Sbjct: 155 IKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPRGRREDY 214
>gi|226472228|emb|CAX77150.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
gi|226472230|emb|CAX77151.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
gi|226472232|emb|CAX77152.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
gi|226472234|emb|CAX77153.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
gi|226472236|emb|CAX77154.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
gi|226472240|emb|CAX77156.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
gi|226472242|emb|CAX77157.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
gi|226473416|emb|CAX71393.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 452
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ +
Sbjct: 29 IRFLIPGRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDV 88
Query: 502 TKNIEEF---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSII 540
+++ +N++ + + +I R++V SQ GS+I
Sbjct: 89 CPKLKDIMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVI 148
Query: 541 GKGGSQIKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
G+GG +IK +R+ V ML P ST+R V + PD V Q + + + +PP+
Sbjct: 149 GRGGERIKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPR 208
Query: 600 GATIPY 605
G Y
Sbjct: 209 GRREDY 214
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ + +++
Sbjct: 35 GRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKD 94
Query: 63 F---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
+N++ + + +I R++V SQ GS+IG+GG +
Sbjct: 95 IMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVIGRGGER 154
Query: 102 IKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
IK +R+ V ML P ST+R V + PD V Q + + + +PP+G Y
Sbjct: 155 IKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPRGRREDY 214
>gi|154794955|gb|ABS86513.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 252
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 34/235 (14%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
+R++V + GSIIG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI
Sbjct: 35 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 94
Query: 142 YQI--CLIMVDSPPKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLA 198
++I CL M D T+ Y+P A GP G+ G + G
Sbjct: 95 HEIGKCL-MEDWERAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGR 150
Query: 199 ALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 258
G G SGG M G + P +N N H+ N +G + N
Sbjct: 151 RAGSGVPSGGHMSGDV------------------PGRRNHNGTYHSNGNENGHRSRENSL 192
Query: 259 QNQ---------ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 304
+ T+ +++P +++G +IGKGG I EIR++SG+ I I+K+ ++
Sbjct: 193 ASAPAPVADRLLRTQNISIPADMVGCIIGKGGAXINEIRRMSGSRISIAKTPHDD 247
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 34/235 (14%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 586
+R++V + GSIIG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI
Sbjct: 35 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 94
Query: 587 YQI--CLIMVDSPPKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLA 643
++I CL M D T+ Y+P A GP G+ G + G
Sbjct: 95 HEIGKCL-MEDWERAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGR 150
Query: 644 ALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 703
G G SGG M G + P +N N H+ N +G + N
Sbjct: 151 RAGSGVPSGGHMSGDV------------------PGRRNHNGTYHSNGNENGHRSRENSL 192
Query: 704 QNQ---------ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 749
+ T+ +++P +++G +IGKGG I EIR++SG+ I I+K+ ++
Sbjct: 193 ASAPAPVADRLLRTQNISIPADMVGCIIGKGGAXINEIRRMSGSRISIAKTPHDD 247
>gi|354542956|emb|CCE39674.1| hypothetical protein CPAR2_600900 [Candida parapsilosis]
Length = 375
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
R ++ KE G +IG++G+ + +REE+ +K IS + T ERI+TV G +D +A S
Sbjct: 111 YRVLVSAKEAGCLIGQNGKVIDSIREETNTKAGISRLIAGTHERILTVSGKLDDCAKALS 170
Query: 500 -----LITKNIEEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
L+ +IE ++ K L E + LRL++P SQ G++IG G++I+ I+
Sbjct: 171 YFAQALLGSSIETYNYFPLKQLSSTPCVEHETTILRLLIPNSQMGTLIGAKGARIQQIQH 230
Query: 553 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 607
G S+ + LP S ER V ++G D + A+ I CLI S G T Y P
Sbjct: 231 NFGISMIASKSFLPGSNERLVELQGTVDDLYDALRIISRCLIEDFSSSVGTTTYYVP 287
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 11/173 (6%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS---- 54
+ KE G +IG++G+ + +REE+ +K IS + T ERI+TV G +D +A S
Sbjct: 115 VSAKEAGCLIGQNGKVIDSIREETNTKAGISRLIAGTHERILTVSGKLDDCAKALSYFAQ 174
Query: 55 -LITKNIEEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
L+ +IE ++ K L E + LRL++P SQ G++IG G++I+ I+ G
Sbjct: 175 ALLGSSIETYNYFPLKQLSSTPCVEHETTILRLLIPNSQMGTLIGAKGARIQQIQHNFGI 234
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 162
S+ + LP S ER V ++G D + A+ I CLI S G T Y P
Sbjct: 235 SMIASKSFLPGSNERLVELQGTVDDLYDALRIISRCLIEDFSSSVGTTTYYVP 287
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 313
K++Q + T ++ PN+++GA+IGK G++I +RK+SGAMI I E E S++R T
Sbjct: 288 KSHQSTRKSTATISFPNDMVGALIGKNGSRIQGVRKVSGAMIGI---GEAVEGSDERVFT 344
Query: 314 MTGTPDAIALAQYLINMSVE 333
+TGT A+ A+ L+ ++E
Sbjct: 345 ITGTQQAVEKAKSLLYHNLE 364
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 699 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 758
K++Q + T ++ PN+++GA+IGK G++I +RK+SGAMI I E E S++R T
Sbjct: 288 KSHQSTRKSTATISFPNDMVGALIGKNGSRIQGVRKVSGAMIGI---GEAVEGSDERVFT 344
Query: 759 MTGTPDAIALAQYLINMSVE 778
+TGT A+ A+ L+ ++E
Sbjct: 345 ITGTQQAVEKAKSLLYHNLE 364
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ ++G++IG G +++++ G + S S P ER+V + G++D L+ A
Sbjct: 205 LRLLIPNSQMGTLIGAKGARIQQIQHNFGISMIASKSFLPGSNERLVELQGTVDDLYDAL 264
Query: 499 SLITKN-IEEF--------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+I++ IE+F + H + I P G++IGK GS+I+
Sbjct: 265 RIISRCLIEDFSSSVGTTTYYVPKSHQSTRKSTATISF----PNDMVGALIGKNGSRIQG 320
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+R+ SGA + + + + S ER I G AV +A
Sbjct: 321 VRKVSGAMIGIG-EAVEGSDERVFTITGTQQAVEKA 355
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKN-I 60
++G++IG G +++++ G + S S P ER+V + G++D L+ A +I++ I
Sbjct: 213 QMGTLIGAKGARIQQIQHNFGISMIASKSFLPGSNERLVELQGTVDDLYDALRIISRCLI 272
Query: 61 EEF--------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
E+F + H + I P G++IGK GS+I+ +R+ SGA
Sbjct: 273 EDFSSSVGTTTYYVPKSHQSTRKSTATISF----PNDMVGALIGKNGSRIQGVRKVSGAM 328
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQA 140
+ + + + S ER I G AV +A
Sbjct: 329 IGIG-EAVEGSDERVFTITGTQQAVEKA 355
>gi|392353290|ref|XP_003751453.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPAATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK ++E + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELQENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLLSESPIKGX 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPAATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK ++E + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELQENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLLSESPIKGXAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I K+ E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASI---KTDEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
QYL+ SV+
Sbjct: 445 QNTQYLLQNSVK 456
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I K+ E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASI---KTDEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
QYL+ SV+
Sbjct: 445 QNTQYLLQNSVK 456
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASI-KTDEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
Y
Sbjct: 446 NTQY 449
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASI-KTDEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
Y
Sbjct: 446 NTQY 449
Score = 40.0 bits (92), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 407 GGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLR 466
G S GG G+ G GG I TT V + GSIIGK G+ +K++R
Sbjct: 369 GYDSYAGGRGSYGDLGG--------PIITTQV------TIPKDLAGSIIGKGGQRIKQIR 414
Query: 467 EESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
ESG+ I + + +RI+T+ G+ D + L+ +++++
Sbjct: 415 HESGASIKTDEPLEGSEDRIITITGTQDQIQNTQYLLQNSVKQY 458
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I + + +RI+T+ G+ D + L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKTDEPLEGSEDRIITITGTQDQIQNTQYLLQNSVKQY 458
>gi|226472226|emb|CAX77149.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 452
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ +
Sbjct: 29 IRFLIPGRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDV 88
Query: 502 TKNIEEF---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSII 540
+++ +N++ + + +I R++V SQ GS+I
Sbjct: 89 CPKLKDIMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVI 148
Query: 541 GKGGSQIKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
G+GG +IK +R+ V ML P ST+R V + PD V Q + + + +PP+
Sbjct: 149 GRGGERIKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPR 208
Query: 600 GATIPY 605
G Y
Sbjct: 209 GRREDY 214
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ + +++
Sbjct: 35 GRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKD 94
Query: 63 F---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
+N++ + + +I R++V SQ GS+IG+GG +
Sbjct: 95 IMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVIGRGGER 154
Query: 102 IKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
IK +R+ V ML P ST+R V + PD V Q + + + +PP+G Y
Sbjct: 155 IKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPRGRREDY 214
>gi|71997385|ref|NP_001023001.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
gi|373218579|emb|CCD61630.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
Length = 510
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 152/352 (43%), Gaps = 52/352 (14%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
++IT VP +++G VIGKGG++I I++ SG R+ + + + R T+ G PD
Sbjct: 5 DKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGC--RVQMDPDHQSVNGFRNCTIEGPPD 62
Query: 320 AIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSA----------------P 363
+A+A+ M +++ N G G + + + + +P+
Sbjct: 63 QVAVAR---QMITQVINRNQTGAQPGAAP-GEVTEEMLIPADKIGLVIGKGGETIRIVQE 118
Query: 364 LAGLNASNPL-----AAALPQLAQILTKPGALNALTSLSA-----LGGLSDLLGGGSSGG 413
+GL N + A P+ +++ P A+ +L G + LL
Sbjct: 119 QSGLRNCNVVQETTTATGQPKPLRMIGSPAAIETAKALVHNIMNNTQGNAPLLQRAPHQP 178
Query: 414 GSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKI 473
GG+G Q + I+ G IIGK GE +K+L E+G+KI
Sbjct: 179 SGQFGGGYGA------------QEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKI 226
Query: 474 YISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEEFHKN----QNKHLGGNGESQLIQ 526
+ P +RI ++G+ D ++RA IT+ + KN Q++ G
Sbjct: 227 QFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIVNRAIKNNGAPQDRGSAGTVLPGQSI 286
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-SDMLPNSTEREVNIKG 577
+ VPA +CG +IGKGG IK I +GA+ +A + N E+ IKG
Sbjct: 287 FYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEKVFEIKG 338
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEEF 63
G IIGK GE +K+L E+G+KI + P +RI ++G+ D ++RA IT+ +
Sbjct: 205 GMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIVNRA 264
Query: 64 HKN----QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-SD 118
KN Q++ G + VPA +CG +IGKGG IK I +GA+ +A +
Sbjct: 265 IKNNGAPQDRGSAGTVLPGQSIFYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAPAA 324
Query: 119 MLPNSTEREVNIKG 132
N E+ IKG
Sbjct: 325 EQKNEDEKVFEIKG 338
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKI--YISDSSTPE---RIVTVIGSMDSLFRAFS 499
++ ++G +IGK GET++ ++E+SG + + +++T + + +IGS ++ A +
Sbjct: 96 LIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQPKPLRMIGSPAAIETAKA 155
Query: 500 LITKNIEEFHKNQ----------NKHLGGNGESQLIQLR--LIVPASQCGSIIGKGGSQI 547
L+ + N + GG +Q Q + +IVP G IIGKGG I
Sbjct: 156 LVHNIMNNTQGNAPLLQRAPHQPSGQFGGGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMI 215
Query: 548 KTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIM 593
K + +G + D PNS +R I G D + +A +I I+
Sbjct: 216 KRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIV 261
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 5 EVGSIIGKSGETVKKLREESGSKI--YISDSSTPE---RIVTVIGSMDSLFRAFSLITKN 59
++G +IGK GET++ ++E+SG + + +++T + + +IGS ++ A +L+
Sbjct: 101 KIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQPKPLRMIGSPAAIETAKALVHNI 160
Query: 60 IEEFHKNQ----------NKHLGGNGESQLIQLR--LIVPASQCGSIIGKGGSQIKTIRE 107
+ N + GG +Q Q + +IVP G IIGKGG IK +
Sbjct: 161 MNNTQGNAPLLQRAPHQPSGQFGGGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAA 220
Query: 108 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIM 148
+G + D PNS +R I G D + +A +I I+
Sbjct: 221 ETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIV 261
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYIS---DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
K VG +IGK G ++ +++ SG ++ + S R T+ G D + A +IT+ I
Sbjct: 16 KVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPPDQVAVARQMITQVI 75
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
++NQ G ++ + +++PA + G +IGKGG I+ ++E SG
Sbjct: 76 ---NRNQTGAQPGAAPGEVTE-EMLIPADKIGLVIGKGGETIRIVQEQSG 121
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
++IT VP +++G VIGKGG++I I++ SG R+ + + + R T+ G PD
Sbjct: 5 DKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGC--RVQMDPDHQSVNGFRNCTIEGPPD 62
Query: 765 AIALAQYLINMSV 777
+A+A+ +I +
Sbjct: 63 QVAVARQMITQVI 75
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 75 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 134
G+S I VP G +IGKGGS+I+ I++TSG V + D + R I+G P
Sbjct: 2 GDSDKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPP 61
Query: 135 DAVTQAIYQICLIM 148
D V A I ++
Sbjct: 62 DQVAVARQMITQVI 75
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 520 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 579
G+S I VP G +IGKGGS+I+ I++TSG V + D + R I+G P
Sbjct: 2 GDSDKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPP 61
Query: 580 DAVTQAIYQICLIM 593
D V A I ++
Sbjct: 62 DQVAVARQMITQVI 75
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 176/421 (41%), Gaps = 88/421 (20%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS--------- 490
R++ +++GSIIGK GE K+LR +S S I IS++ ER+VT+ S
Sbjct: 12 YRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSEETNLFED 71
Query: 491 --------MDSLFRAFS-LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
D+LF +I +++ + + GE Q + +R++VP Q G +IG
Sbjct: 72 TGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRMLVPTDQIGCVIG 131
Query: 542 KGGSQIKTIRETSGASVYVASDM----LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
KGG I+ IR + A + + D L ST+ + I G P V +A+YQ+ + ++P
Sbjct: 132 KGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKALYQVATRLHENP 191
Query: 598 PKGATI-------PYRP----LPQNAGGP--GLIGNQFGMQNSLMGAPDMGNNPLAGLAA 644
+ + Y+ + NAG P GL GN G +S PD + A +
Sbjct: 192 SRSQHLLLSSSANTYQSGGMFVTANAGAPLLGLYGNYKGSWSSSF-YPDQRDEASAKDFS 250
Query: 645 LGLGG-----------------------------NSGGGMGGGLNAAALAALASSQLKTN 675
L L +S G G + +++ + +
Sbjct: 251 LRLVCPIANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGND----CIIFISAKEFFED 306
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
P N R S+KT ++ + IT + V IG ++GKGG I E+R
Sbjct: 307 QSP-TMNAALRMQPRC-----SEKTEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMR 360
Query: 734 KISGAMIRISKSSE--EEEDSNDRTITMTGTPDAI--ALAQYLINMSVELLRANLNGEGG 789
++ A IRI + +D + +TG+ + AL Q ++ L+AN+ G G
Sbjct: 361 NLTRANIRIISEDNLPKVAGEDDEMVQITGSLEVASNALLQVILR-----LKANIFGRDG 415
Query: 790 G 790
Sbjct: 416 A 416
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 173/414 (41%), Gaps = 88/414 (21%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS---------------- 45
+++GSIIGK GE K+LR +S S I IS++ ER+VT+ S
Sbjct: 19 RKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSEETNLFEDTGEYVCP 78
Query: 46 -MDSLFRAFS-LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 103
D+LF +I +++ + + GE Q + +R++VP Q G +IGKGG I+
Sbjct: 79 AQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRMLVPTDQIGCVIGKGGQVIQ 138
Query: 104 TIRETSGASVYVASDM----LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI- 158
IR + A + + D L ST+ + I G P V +A+YQ+ + ++P + +
Sbjct: 139 NIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKALYQVATRLHENPSRSQHLL 198
Query: 159 ------PYRP----LPQNAGGP--GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGG-- 204
Y+ + NAG P GL GN G +S PD + A +L L
Sbjct: 199 LSSSANTYQSGGMFVTANAGAPLLGLYGNYKGSWSSSF-YPDQRDEASAKDFSLRLVCPI 257
Query: 205 ---------------------------NSGGGMGGGLNAAALAALASSQLKTNHMPRNQN 237
+S G G + +++ + + P N
Sbjct: 258 ANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGND----CIIFISAKEFFEDQSP-TMN 312
Query: 238 QNQNQHNRNNRDGPSQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
R S+KT ++ + IT + V IG ++GKGG I E+R ++ A I
Sbjct: 313 AALRMQPRC-----SEKTEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANI 367
Query: 296 RISKSSE--EEEDSNDRTITMTGTPDAI--ALAQYLINMSVELLRANLNGEGGG 345
RI + +D + +TG+ + AL Q ++ L+AN+ G G
Sbjct: 368 RIISEDNLPKVAGEDDEMVQITGSLEVASNALLQVILR-----LKANIFGRDGA 416
>gi|226472244|emb|CAX77158.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 452
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ +
Sbjct: 29 IRFLIPGRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDV 88
Query: 502 TKNIEEF---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSII 540
+++ +N++ + + +I R++V SQ GS+I
Sbjct: 89 CPKLKDIMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVI 148
Query: 541 GKGGSQIKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
G+GG +IK +R+ V ML P ST+R V + PD V Q + + + +PP+
Sbjct: 149 GRGGERIKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPR 208
Query: 600 GATIPY 605
G Y
Sbjct: 209 GRREDY 214
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ + +++
Sbjct: 35 GRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKD 94
Query: 63 F---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
+N++ + + +I R++V SQ GS+IG+GG +
Sbjct: 95 IMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVIGRGGER 154
Query: 102 IKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
IK +R+ V ML P ST+R V + PD V Q + + + +PP+G Y
Sbjct: 155 IKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPRGRREDY 214
>gi|355567865|gb|EHH24206.1| hypothetical protein EGK_07823 [Macaca mulatta]
Length = 464
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R + I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQPTITLFQECCPHSTDRVILIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R + I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQPTITLFQECCPHSTDRVILIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E D+ IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGFKDQIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E D+ IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGFKDQIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 62 EFHKNQNKHLGGNGES-----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
E+H + + H GG G +I ++ +P GSIIGKGG +IK IR SGAS+ +
Sbjct: 366 EYHADYS-HAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI- 423
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIY 142
+ L ++ + I G D + A Y
Sbjct: 424 DEPLEGFKDQIITITGTQDQIQNAQY 449
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 507 EFHKNQNKHLGGNGES-----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
E+H + + H GG G +I ++ +P GSIIGKGG +IK IR SGAS+ +
Sbjct: 366 EYHADYS-HAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI- 423
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIY 587
+ L ++ + I G D + A Y
Sbjct: 424 DEPLEGFKDQIITITGTQDQIQNAQY 449
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 410 SSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREES 469
S GG G+ G GG I TT V + GSIIGK G+ +K++R ES
Sbjct: 372 SHAGGRGSYGDLGG--------PIITTQV------TIPKDLAGSIIGKGGQRIKQIRHES 417
Query: 470 GSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
G+ I I + ++I+T+ G+ D + A L+ +++++
Sbjct: 418 GASIKIDEPLEGFKDQIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + ++I+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGFKDQIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 35/283 (12%)
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
F + H+ E + L++++P+ GSIIGKGG I +++ +GA++ ++ D
Sbjct: 10 FETLKGVHVTREEEGEYF-LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFY 68
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
P +TER ++G +A+ A++ V R +PQ P ++
Sbjct: 69 PGTTERVCLVQGTAEALN-AVHSFIAEKV-----------REIPQAMTKPEVV------- 109
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGM---GGGLNAAALAALASSQLKTNHMPRNQN 237
N L P NP A + NS G+ GG A+ + + ++ + P N
Sbjct: 110 NILQ--PQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN 167
Query: 238 QNQN--------QHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
+ + QK + + E+ VP L+GA++GKGG + E ++
Sbjct: 168 LQERVVTVSGEPEQVHKAVSAIVQKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQE 227
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
++GA I+ISK E + +R +T+TG+P A AQYLI+ V
Sbjct: 228 LTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 270
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 35/283 (12%)
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 565
F + H+ E + L++++P+ GSIIGKGG I +++ +GA++ ++ D
Sbjct: 10 FETLKGVHVTREEEGEYF-LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFY 68
Query: 566 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 625
P +TER ++G +A+ A++ V R +PQ P ++
Sbjct: 69 PGTTERVCLVQGTAEALN-AVHSFIAEKV-----------REIPQAMTKPEVV------- 109
Query: 626 NSLMGAPDMGNNPLAGLAALGLGGNSGGGM---GGGLNAAALAALASSQLKTNHMPRNQN 682
N L P NP A + NS G+ GG A+ + + ++ + P N
Sbjct: 110 NILQ--PQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN 167
Query: 683 QNQN--------QHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+ + QK + + E+ VP L+GA++GKGG + E ++
Sbjct: 168 LQERVVTVSGEPEQVHKAVSAIVQKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQE 227
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
++GA I+ISK E + +R +T+TG+P A AQYLI+ V
Sbjct: 228 LTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 270
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 141/342 (41%), Gaps = 101/342 (29%)
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 314
T +++ + ++ +P+ G++IGKGG I +++K +GA I++SKS +
Sbjct: 19 TREEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD----------FY 68
Query: 315 TGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP-L 373
GT + + L Q G E+ LNA + +
Sbjct: 69 PGTTERVCLVQ-----------------GTAEA-------------------LNAVHSFI 92
Query: 374 AAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANI 433
A + ++ Q +TKP +N L + + P+ A
Sbjct: 93 AEKVREIPQAMTKPEVVNILQPQTTMN---------------------------PDRA-- 123
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIG 489
++ + I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G
Sbjct: 124 ------KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSG 177
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+ + +A S I + L +L+++ VP + G+I+GKGG +
Sbjct: 178 EPEQVHKAVSAIVQK-----------LAAESAKELVEIA--VPENLVGAILGKGGKTLVE 224
Query: 550 IRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQI 589
+E +GA + ++ + LP + R V I G P A A Y I
Sbjct: 225 YQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLI 266
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 18/155 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 38 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 97
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 98 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 157
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC 145
++ P N ER V + G P+ V +A+ I
Sbjct: 158 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIV 190
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 18/155 (11%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 38 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 97
Query: 507 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 98 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 157
Query: 559 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC 590
++ P N ER V + G P+ V +A+ I
Sbjct: 158 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIV 190
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 19/144 (13%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGSMDSLFRAFSLITKNIEE 62
G IIGK G TVK + E+SG+ + +S + ER+VTV G + + +A S I +
Sbjct: 136 GLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQK--- 192
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
L +L+++ VP + G+I+GKGG + +E +GA + ++ + L
Sbjct: 193 --------LAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFL 242
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
P + R V I G P A A Y I
Sbjct: 243 PGTRNRRVTITGSPAATQAAQYLI 266
>gi|426258298|ref|XP_004022751.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 330
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 30/232 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 49 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 108
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 109 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 165
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG
Sbjct: 166 VKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 225
Query: 602 TIPYRP----LPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGG 649
PY P + GG ++ + + +G P G LAG + +G GG
Sbjct: 226 AQPYDPNFYDETYDYGGFTMMFDD--RRGRPVGFPMRGREDLAG-SIIGKGG 274
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 30/228 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 53 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 112
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 113 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 169
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 170 KIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 229
Query: 161 RP----LPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGG 204
P + GG ++ + + +G P G LAG + +G GG
Sbjct: 230 DPNFYDETYDYGGFTMMFDD--RRGRPVGFPMRGREDLAG-SIIGKGG 274
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
+L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I AQYL+
Sbjct: 263 EDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNAQYLLQ 319
Query: 330 MSVE 333
SV+
Sbjct: 320 NSVK 323
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 715 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I AQYL+
Sbjct: 263 EDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQIQNAQYLLQ 319
Query: 775 MSVE 778
SV+
Sbjct: 320 NSVK 323
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 22/180 (12%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIV 485
NY + + + +R ++ G IIG G +K+LRE + + I + P +R+V
Sbjct: 138 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVV 197
Query: 486 TVIGSMDSLFRAFSLITKNIEE---------FHKN-QNKHLGGNGESQLIQLRLIVPA-- 533
+ G D + +I I E + N ++ G + + R P
Sbjct: 198 LIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGF 257
Query: 534 ------SQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
GSIIGKGG +IK IR SGAS+ + + L S +R + I G D + A Y
Sbjct: 258 PMRGREDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 316
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 22/157 (14%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE- 62
G IIG G +K+LRE + + I + P +R+V + G D + +I I E
Sbjct: 161 GGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISES 220
Query: 63 --------FHKN-QNKHLGGNGESQLIQLRLIVPA--------SQCGSIIGKGGSQIKTI 105
+ N ++ G + + R P GSIIGKGG +IK I
Sbjct: 221 PIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGREDLAGSIIGKGGQRIKQI 280
Query: 106 RETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
R SGAS+ + + L S +R + I G D + A Y
Sbjct: 281 RHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 316
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 429 NYANIQTTGVQRRMRHI---MQGKE--VGSIIGKSGETVKKLREESGSKIYISD--SSTP 481
+Y RR R + M+G+E GSIIGK G+ +K++R ESG+ I I + +
Sbjct: 239 DYGGFTMMFDDRRGRPVGFPMRGREDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE 298
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEEF 508
+RI+T+ G+ D + A L+ +++++
Sbjct: 299 DRIITITGTQDQIQNAQYLLQNSVKQY 325
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 1 MQGKE--VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLI 56
M+G+E GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+
Sbjct: 259 MRGREDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL 318
Query: 57 TKNIEEF 63
+++++
Sbjct: 319 QNSVKQY 325
>gi|71997383|ref|NP_001023000.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
gi|373218578|emb|CCD61629.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
Length = 557
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 153/352 (43%), Gaps = 52/352 (14%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
++IT VP +++G VIGKGG++I I++ SG R+ + + + R T+ G PD
Sbjct: 52 DKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGC--RVQMDPDHQSVNGFRNCTIEGPPD 109
Query: 320 AIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSA----------------P 363
+A+A+ M +++ N G G + + + + +P+
Sbjct: 110 QVAVAR---QMITQVINRNQTGAQPGAAP-GEVTEEMLIPADKIGLVIGKGGETIRIVQE 165
Query: 364 LAGLNASNPL-----AAALPQLAQILTKPGALNALTSL-----SALGGLSDLLGGGSSGG 413
+GL N + A P+ +++ P A+ +L + G + LL
Sbjct: 166 QSGLRNCNVVQETTTATGQPKPLRMIGSPAAIETAKALVHNIMNNTQGNAPLLQRAPHQP 225
Query: 414 GSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKI 473
GG+G Q + I+ G IIGK GE +K+L E+G+KI
Sbjct: 226 SGQFGGGYGA------------QEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKI 273
Query: 474 YISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEEFHKN----QNKHLGGNGESQLIQ 526
+ P +RI ++G+ D ++RA IT+ + KN Q++ G
Sbjct: 274 QFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIVNRAIKNNGAPQDRGSAGTVLPGQSI 333
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-SDMLPNSTEREVNIKG 577
+ VPA +CG +IGKGG IK I +GA+ +A + N E+ IKG
Sbjct: 334 FYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEKVFEIKG 385
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEEF 63
G IIGK GE +K+L E+G+KI + P +RI ++G+ D ++RA IT+ +
Sbjct: 252 GMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIVNRA 311
Query: 64 HKN----QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-SD 118
KN Q++ G + VPA +CG +IGKGG IK I +GA+ +A +
Sbjct: 312 IKNNGAPQDRGSAGTVLPGQSIFYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAPAA 371
Query: 119 MLPNSTEREVNIKG 132
N E+ IKG
Sbjct: 372 EQKNEDEKVFEIKG 385
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKI--YISDSSTPE---RIVTVIGSMDSLFRAFS 499
++ ++G +IGK GET++ ++E+SG + + +++T + + +IGS ++ A +
Sbjct: 143 LIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQPKPLRMIGSPAAIETAKA 202
Query: 500 LITKNIEEFHKNQ----------NKHLGGNGESQLIQLR--LIVPASQCGSIIGKGGSQI 547
L+ + N + GG +Q Q + +IVP G IIGKGG I
Sbjct: 203 LVHNIMNNTQGNAPLLQRAPHQPSGQFGGGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMI 262
Query: 548 KTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIM 593
K + +G + D PNS +R I G D + +A +I I+
Sbjct: 263 KRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIV 308
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 5 EVGSIIGKSGETVKKLREESGSKI--YISDSSTPE---RIVTVIGSMDSLFRAFSLITKN 59
++G +IGK GET++ ++E+SG + + +++T + + +IGS ++ A +L+
Sbjct: 148 KIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQPKPLRMIGSPAAIETAKALVHNI 207
Query: 60 IEEFHKNQ----------NKHLGGNGESQLIQLR--LIVPASQCGSIIGKGGSQIKTIRE 107
+ N + GG +Q Q + +IVP G IIGKGG IK +
Sbjct: 208 MNNTQGNAPLLQRAPHQPSGQFGGGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAA 267
Query: 108 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIM 148
+G + D PNS +R I G D + +A +I I+
Sbjct: 268 ETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIV 308
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYIS---DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
K VG +IGK G ++ +++ SG ++ + S R T+ G D + A +IT+ I
Sbjct: 63 KVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPPDQVAVARQMITQVI 122
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
++NQ G ++ + +++PA + G +IGKGG I+ ++E SG
Sbjct: 123 ---NRNQTGAQPGAAPGEVTE-EMLIPADKIGLVIGKGGETIRIVQEQSG 168
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
++IT VP +++G VIGKGG++I I++ SG R+ + + + R T+ G PD
Sbjct: 52 DKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGC--RVQMDPDHQSVNGFRNCTIEGPPD 109
Query: 765 AIALAQYLINMSV 777
+A+A+ +I +
Sbjct: 110 QVAVARQMITQVI 122
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 75 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 134
G+S I VP G +IGKGGS+I+ I++TSG V + D + R I+G P
Sbjct: 49 GDSDKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPP 108
Query: 135 DAVTQAIYQICLIM 148
D V A I ++
Sbjct: 109 DQVAVARQMITQVI 122
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 520 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 579
G+S I VP G +IGKGGS+I+ I++TSG V + D + R I+G P
Sbjct: 49 GDSDKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPP 108
Query: 580 DAVTQAIYQICLIM 593
D V A I ++
Sbjct: 109 DQVAVARQMITQVI 122
>gi|29841392|gb|AAP06424.1| similar to GenBank Accession Number S41224 hnRNP protein in Xenopus
laevis [Schistosoma japonicum]
Length = 454
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ +
Sbjct: 29 IRFLIPGRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDV 88
Query: 502 TKNIEEF---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSII 540
+++ +N++ + + +I R++V SQ GS+I
Sbjct: 89 CPKLKDIMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVI 148
Query: 541 GKGGSQIKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
G+GG +IK +R+ V ML P ST+R V + PD V Q + + + +PP+
Sbjct: 149 GRGGERIKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPR 208
Query: 600 GATIPY 605
G Y
Sbjct: 209 GRREDY 214
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ + +++
Sbjct: 35 GRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKD 94
Query: 63 F---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
+N++ + + +I R++V SQ GS+IG+GG +
Sbjct: 95 IMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVIGRGGER 154
Query: 102 IKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
IK +R+ V ML P ST+R V + PD V Q + + + +PP+G Y
Sbjct: 155 IKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPRGRREDY 214
>gi|449514357|ref|XP_002192510.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Taeniopygia
guttata]
Length = 434
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 14/160 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 101
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 102 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 154
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQI-------CLIMV 594
+ P+ST+R V I G PD V + I I CL +V
Sbjct: 155 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISEECLFVV 194
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 14/156 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 46 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 106 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 158
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI-------CLIMV 149
P+ST+R V I G PD V + I I CL +V
Sbjct: 159 PHSTDRVVLIGGKPDRVVECIKIILDLISEECLFVV 194
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 358 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 414
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 415 QNAQYLLQNSVK 426
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 358 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 414
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 415 QNAQYLLQNSVK 426
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 357 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 415
Query: 139 QAIY 142
A Y
Sbjct: 416 NAQY 419
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 357 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 415
Query: 584 QAIY 587
A Y
Sbjct: 416 NAQY 419
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 370 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 428
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 370 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 428
>gi|392333155|ref|XP_003752811.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 24/185 (12%)
Query: 444 HIM-QGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLIT 502
HI+ Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 46 HILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKII 105
Query: 503 KNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+EE + N + G + + +L RL++ S G IIG
Sbjct: 106 PTLEEGLQLPSPAATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGV 162
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 602
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 163 KGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRA 222
Query: 603 IPYRP 607
PY P
Sbjct: 223 QPYDP 227
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPAATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
QYL+ SV+
Sbjct: 445 QNTQYLLQNSVK 456
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
QYL+ SV+
Sbjct: 445 QNTQYLLQNSVK 456
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
Y
Sbjct: 446 NTQY 449
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
Y
Sbjct: 446 NTQY 449
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Query: 407 GGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLR 466
G S GG G+ G GG I TT V + GSIIGK G+ +K++R
Sbjct: 369 GYDSYAGGRGSYGDLGG--------PIITTQV------TIPKDLAGSIIGKGGQRIKQIR 414
Query: 467 EESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
ESG+ I I + + +RI+T+ G+ D + L+ +++++
Sbjct: 415 HESGASIKIDEPLEGSEDRIITITGTQDQIQNTQYLLQNSVKQY 458
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNTQYLLQNSVKQY 458
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 155/382 (40%), Gaps = 96/382 (25%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VG+IIG+ GE +KK+ EE+ ++I I D PER V +
Sbjct: 233 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSP 292
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD L R IT + + + G G + RL+VP+SQ GS+IGK G+ IK+
Sbjct: 293 AMDGLLRVHKRITDSSDGESSQPQRSAGNIGPT-----RLLVPSSQAGSLIGKQGATIKS 347
Query: 550 IRETSGASVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQI------------CLIMVD 595
I+++S + V + ++ P + +R V I+G P V +A+ I L + +
Sbjct: 348 IQDSSKSIVRIVENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDRSVLPLFE 407
Query: 596 SPPKGATIPYR---PLPQNAGGPGLI---------------GNQFGM---QNSLMGAPD- 633
+ K +P P PQ+ G P QF Q+S +PD
Sbjct: 408 AHMKMHGMPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMHPRPQDSYYPSPDV 467
Query: 634 --MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRN 691
M P G++A G G G
Sbjct: 468 PHMEKQPHYGISAYGREAPPSGASATG--------------------------------- 494
Query: 692 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
+Q + +Q+ +M +P AVIG G I IR+ SGA + I +S
Sbjct: 495 -----NQPPSHAGSQVAHDMHIPLAYADAVIGAAGASISYIRRHSGATVTIQESRGA--- 546
Query: 752 SNDRTITMTGTPDAIALAQYLI 773
+ T+ +TGT + AQ LI
Sbjct: 547 PGEMTVEITGTAAQVQTAQQLI 568
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 152/376 (40%), Gaps = 96/376 (25%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLF 50
++VG+IIG+ GE +KK+ EE+ ++I I D PER V + +MD L
Sbjct: 239 AQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSPAMDGLL 298
Query: 51 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
R IT + + + G G + RL+VP+SQ GS+IGK G+ IK+I+++S
Sbjct: 299 RVHKRITDSSDGESSQPQRSAGNIGPT-----RLLVPSSQAGSLIGKQGATIKSIQDSSK 353
Query: 111 ASVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQI------------CLIMVDSPPKGA 156
+ V + ++ P + +R V I+G P V +A+ I L + ++ K
Sbjct: 354 SIVRIVENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDRSVLPLFEAHMKMH 413
Query: 157 TIPYR---PLPQNAGGPGLI---------------GNQFGM---QNSLMGAPD---MGNN 192
+P P PQ+ G P QF Q+S +PD M
Sbjct: 414 GMPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQFMHPRPQDSYYPSPDVPHMEKQ 473
Query: 193 PLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPS 252
P G++A G G G +
Sbjct: 474 PHYGISAYGREAPPSGASATG--------------------------------------N 495
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
Q + +Q+ +M +P AVIG G I IR+ SGA + I +S + T+
Sbjct: 496 QPPSHAGSQVAHDMHIPLAYADAVIGAAGASISYIRRHSGATVTIQESRGA---PGEMTV 552
Query: 313 TMTGTPDAIALAQYLI 328
+TGT + AQ LI
Sbjct: 553 EITGTAAQVQTAQQLI 568
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 134/561 (23%), Positives = 222/561 (39%), Gaps = 123/561 (21%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS---NDRTITMTGTPDAIALAQYLIN 329
+G V+GKGG + +R+ SGA IR+ ++ E+ D I ++G+ A A L++
Sbjct: 121 VGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGSFSAARKALLLVS 180
Query: 330 MSVELLRANLNGEGGGESNMDDFSSD-NNLPSSAPLAGLNASNPLAAALPQLAQILTKPG 388
++ D+ D +N PS P P + + PG
Sbjct: 181 TCLQ----------------DNPRPDTSNFPSGRPFG------------PPGSGVGCPPG 212
Query: 389 A-LNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQ 447
++ S + D S G+ GP + Q R I
Sbjct: 213 VDPHSQRSYLPPPHVPDYHARNFSSNGAA---------PGPRFFVEQEI----VFRMICL 259
Query: 448 GKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMDSLF 495
VG +IGK G T++ L+ E+G+ + + D + + ERI+ + S D+L
Sbjct: 260 NDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALL 319
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
R +S I++ +S + RL+VPA G ++GKGGS I +R+ +G
Sbjct: 320 RVYSKISE-------------ASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTG 366
Query: 556 ASVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSP-PKGATIPY 605
AS+ + ++ +P +R V + G ++ A+ I LI+ P P G PY
Sbjct: 367 ASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLIIPPKPHPSGGMPPY 426
Query: 606 RPL------------PQNAGG--PGLIGNQFGMQNSLMGAPDMGN------NPLAGLAAL 645
P+ P + G P + F N MG D+ + P + +
Sbjct: 427 PPVGNPSHHQSRQEAPSHHSGGMPPYPMHPF-RPNPPMGPFDVADPRPPGPPPSHPMEHM 485
Query: 646 GLG------GNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK 699
G G GG + + A T+ PR+ + R GP
Sbjct: 486 GADRMPYPYGCEQGGPRPFVEQPSPRTWAPEAPATD-APRSMPDTVPA--VDFRKGP--- 539
Query: 700 TNQQQNQI------TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
+ +NQ+ T E+ +P + IG V G G+ + EI+KISGA I + + +S
Sbjct: 540 VSSSENQVATPATTTTEVVIPCKYIGFVCGTNGSDLDEIKKISGAAITVHDPKPGDTNS- 598
Query: 754 DRTITMTGTPDAIALAQYLIN 774
T+ + G P+ AQ LI+
Sbjct: 599 --TVIICGDPEQTKKAQSLIH 617
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 160/378 (42%), Gaps = 77/378 (20%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMDSLFRAF 53
VG +IGK G T++ L+ E+G+ + + D + + ERI+ + S D+L R +
Sbjct: 263 VGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVY 322
Query: 54 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
S I++ +S + RL+VPA G ++GKGGS I +R+ +GAS+
Sbjct: 323 SKISE-------------ASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASI 369
Query: 114 YV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSP-PKGATIPYRPL 163
+ ++ +P +R V + G ++ A+ I LI+ P P G PY P+
Sbjct: 370 RIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLIIPPKPHPSGGMPPYPPV 429
Query: 164 ------------PQNAGG--PGLIGNQFGMQNSLMGAPDMGN------NPLAGLAALGLG 203
P + G P + F N MG D+ + P + +G
Sbjct: 430 GNPSHHQSRQEAPSHHSGGMPPYPMHPF-RPNPPMGPFDVADPRPPGPPPSHPMEHMGAD 488
Query: 204 ------GNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQ 257
G GG + + A T+ PR+ + R GP +
Sbjct: 489 RMPYPYGCEQGGPRPFVEQPSPRTWAPEAPATD-APRSMPDTVPA--VDFRKGP---VSS 542
Query: 258 QQNQI------TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
+NQ+ T E+ +P + IG V G G+ + EI+KISGA I + + +S T
Sbjct: 543 SENQVATPATTTTEVVIPCKYIGFVCGTNGSDLDEIKKISGAAITVHDPKPGDTNS---T 599
Query: 312 ITMTGTPDAIALAQYLIN 329
+ + G P+ AQ LI+
Sbjct: 600 VIICGDPEQTKKAQSLIH 617
>gi|392347947|ref|XP_003749978.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 23/183 (12%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKN 504
++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 48 LLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPT 107
Query: 505 IEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGG 544
+EE + N + G + + +L RL++ S G IIG G
Sbjct: 108 LEEGLQLPSPAATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKG 164
Query: 545 SQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 604
++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG P
Sbjct: 165 AKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQP 224
Query: 605 YRP 607
Y P
Sbjct: 225 YDP 227
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPAATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S D IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDWIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S D IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDWIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S + + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDWIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S + + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDWIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + + I+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDWIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + + I+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDWIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|473912|gb|AAA21731.1| phosphoprotein [Mus cookii]
Length = 464
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +LRL++ + G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVEVLNYPHYKGSDFDC---ELRLLIHQTLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +LRL++ + G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVEVLNYPHYKGSDFDC---ELRLLIHQTLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|355753438|gb|EHH57484.1| hypothetical protein EGM_07121 [Macaca fascicularis]
Length = 464
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 21/185 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEE-------------------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+EE +H G+ + +LRL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFA--CELRLLIHQSLAGGIIGV 162
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 602
G++IK +RE + ++ + + P+S +R V I G PD V + I I ++ +SP KG
Sbjct: 163 KGAKIKELRENTQTTIKLFQECCPHSADRVVLIGGKPDRVVECIKIILDLISESPIKGRA 222
Query: 603 IPYRP 607
PY P
Sbjct: 223 QPYDP 227
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 21/181 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EE-------------------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
EE +H G+ + +LRL++ S G IIG G++
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFA--CELRLLIHQSLAGGIIGVKGAK 166
Query: 102 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 161
IK +RE + ++ + + P+S +R V I G PD V + I I ++ +SP KG PY
Sbjct: 167 IKELRENTQTTIKLFQECCPHSADRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYD 226
Query: 162 P 162
P
Sbjct: 227 P 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 62 EFHKNQNKHLGGNGES-----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
E+H + + + GG G +I ++ +P GSIIGKGG +IK IR SGAS+ +
Sbjct: 366 EYHADYS-YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI- 423
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIY 142
+ L S +R + I G D + A Y
Sbjct: 424 DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 507 EFHKNQNKHLGGNGES-----QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
E+H + + + GG G +I ++ +P GSIIGKGG +IK IR SGAS+ +
Sbjct: 366 EYHADYS-YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI- 423
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIY 587
+ L S +R + I G D + A Y
Sbjct: 424 DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|312067348|ref|XP_003136700.1| KH domain-containing protein [Loa loa]
Length = 571
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 81/379 (21%)
Query: 262 ITKEMTVPNELIGA--VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
+ + M VP+ +G VIG+GG +I +I+ + +++S E + +N R T+ G+
Sbjct: 33 VMETMEVPDHCVGLGNVIGRGGEQISQIQSQTNCRVQMSP---ESDGNNMRQCTLQGS-- 87
Query: 320 AIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQ 379
MSV+ RA +N + + N P + P+ Q
Sbjct: 88 ---------KMSVDRARAMIN---------EVIARAGNRPPPNRTGHFDGGIPVGTGR-Q 128
Query: 380 LAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQ 439
+ Q + PGA L G ++ GG G P+ + +
Sbjct: 129 ITQEMFIPGAK---CGLEQTGVKMVMIQENQESGGQPKPLRITGDPE-------KVENAR 178
Query: 440 RRMRHIMQGKE-------------------------------VGSIIGKSGETVKKLREE 468
R + I+Q +E VG IIGK GET+K+L E
Sbjct: 179 RMVEEILQSREDHPPGHFGFPGSFGIGGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAE 238
Query: 469 SGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLI 525
SG+KI D +T ER + G+ + + +A I++ + K G G +++
Sbjct: 239 SGAKIQFKPDDDQTTQERCAVIQGTAEQIAKATQFISELV--------KKSGAAGGAEMF 290
Query: 526 QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+ VP+++ G +IGKGG IK I SGA V ++ D PN++E+ IKG P + A
Sbjct: 291 YMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPNASEKVFIIKGTPYQIHHA 348
Query: 586 IYQICLIMVDSPPKGATIP 604
+ I + + D P G +P
Sbjct: 349 QHIIRIKVGDIAP-GTPVP 366
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 14/157 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK GET+K+L ESG+KI D +T ER + G+ + + +A I++ +
Sbjct: 221 VGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAVIQGTAEQIAKATQFISELV-- 278
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 279 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 330
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 159
++E+ IKG P + A + I + + D P G +P
Sbjct: 331 ASEKVFIIKGTPYQIHHAQHIIRIKVGDIAP-GTPVP 366
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 140/357 (39%), Gaps = 76/357 (21%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
+G++IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 46 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 105
Query: 64 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
N+ H G G + I + +P ++CG + +T V +
Sbjct: 106 GNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCG------------LEQTGVKMVMIQ 153
Query: 117 SDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI 173
+ + + I G P+ V A + +I D PP P G G+
Sbjct: 154 ENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFP--------GSFGIG 205
Query: 174 GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP 233
G Q + ++ +G +G GG + + A + A Q K +
Sbjct: 206 GGQRSIGEVIVPRASVG-------MIIGKGGET-------IKRLAAESGAKIQFKPD--- 248
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMT------------------VPNELIGA 275
+ R Q T +Q + T+ ++ VP+ G
Sbjct: 249 -------DDQTTQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTGL 301
Query: 276 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ++I + V
Sbjct: 302 VIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQHIIRIKV 356
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 140/357 (39%), Gaps = 76/357 (21%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 508
+G++IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 46 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 105
Query: 509 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
N+ H G G + I + +P ++CG + +T V +
Sbjct: 106 GNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCG------------LEQTGVKMVMIQ 153
Query: 562 SDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI 618
+ + + I G P+ V A + +I D PP P G G+
Sbjct: 154 ENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFP--------GSFGIG 205
Query: 619 GNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMP 678
G Q + ++ +G +G GG + + A + A Q K +
Sbjct: 206 GGQRSIGEVIVPRASVG-------MIIGKGGET-------IKRLAAESGAKIQFKPD--- 248
Query: 679 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMT------------------VPNELIGA 720
+ R Q T +Q + T+ ++ VP+ G
Sbjct: 249 -------DDQTTQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTGL 301
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ++I + V
Sbjct: 302 VIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQHIIRIKV 356
>gi|198427864|ref|XP_002125995.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K
[Ciona intestinalis]
Length = 402
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ G+IIGK G ++ LR+E + + + DS ERIV+ + ++ A ++
Sbjct: 50 LRVLIPSHTAGAIIGKGGANIRDLRQEFNANVQVPDSHGFERIVSAVAK--TIEDAANIC 107
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
K +E N+ H ++ LR++V SQ G+IIG GS+IK +RE +GA++ V
Sbjct: 108 GKVVEAL--NERMH----HPEKVGCLRMLVHKSQAGTIIGLKGSRIKELREMTGANIKVN 161
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P ST+R ++G D V + + +I + +PPKG Y P
Sbjct: 162 QECCPESTDRVCQVRGTADVVVKCVARILEHLQQAPPKGPIKNYDP 207
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G+IIGK G ++ LR+E + + + DS ERIV+ + ++ A ++ K +E N
Sbjct: 60 GAIIGKGGANIRDLRQEFNANVQVPDSHGFERIVSAVAK--TIEDAANICGKVVEAL--N 115
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
+ H ++ LR++V SQ G+IIG GS+IK +RE +GA++ V + P ST+R
Sbjct: 116 ERMH----HPEKVGCLRMLVHKSQAGTIIGLKGSRIKELREMTGANIKVNQECCPESTDR 171
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
++G D V + + +I + +PPKG Y P
Sbjct: 172 VCQVRGTADVVVKCVARILEHLQQAPPKGPIKNYDP 207
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 31 SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQ 90
+DSST +R S D + + K ++ H GG S I+LR+++P+
Sbjct: 5 TDSSTNKR------SHDDVRESGDSDVKRSRSSFQHDRFHQGGREPSDKIELRVLIPSHT 58
Query: 91 CGSIIGKGGSQIKTIRETSGASVYV 115
G+IIGKGG+ I+ +R+ A+V V
Sbjct: 59 AGAIIGKGGANIRDLRQEFNANVQV 83
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 476 SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQ 535
+DSST +R S D + + K ++ H GG S I+LR+++P+
Sbjct: 5 TDSSTNKR------SHDDVRESGDSDVKRSRSSFQHDRFHQGGREPSDKIELRVLIPSHT 58
Query: 536 CGSIIGKGGSQIKTIRETSGASVYV 560
G+IIGKGG+ I+ +R+ A+V V
Sbjct: 59 AGAIIGKGGANIRDLRQEFNANVQV 83
>gi|226472238|emb|CAX77155.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 306
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ +
Sbjct: 37 IRFLIPGRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDV 96
Query: 502 TKNIEEF---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSII 540
+++ +N++ + + +I R++V SQ GS+I
Sbjct: 97 CPKLKDIMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVI 156
Query: 541 GKGGSQIKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
G+GG +IK +R+ V ML P ST+R V + PD V Q + + + +PP+
Sbjct: 157 GRGGERIKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPR 216
Query: 600 GATIPY 605
G Y
Sbjct: 217 GRREDY 222
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ + +++
Sbjct: 43 GRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKD 102
Query: 63 F---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
+N++ + + +I R++V SQ GS+IG+GG +
Sbjct: 103 IMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVIGRGGER 162
Query: 102 IKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
IK +R+ V ML P ST+R V + PD V Q + + + +PP+G Y
Sbjct: 163 IKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPRGRREDY 222
>gi|448533092|ref|XP_003870552.1| hypothetical protein CORT_0F01960 [Candida orthopsilosis Co 90-125]
gi|380354907|emb|CCG24423.1| hypothetical protein CORT_0F01960 [Candida orthopsilosis]
Length = 384
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
R ++ KE G +IG++G+ + +REE+ +K IS + T ERI+TV G +D +A S
Sbjct: 120 YRVLVSAKEAGCLIGQNGKVIDSIREETNTKAGISRLIAGTHERILTVSGKLDDCAKALS 179
Query: 500 -----LITKNIEEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
L+ +IE ++ K L E + LRL++P SQ G++IG G++I+ I+
Sbjct: 180 YFAQALLGSSIETYNYFPLKQLSSTPCVEHETTILRLLIPNSQMGTLIGARGARIQQIQH 239
Query: 553 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 607
S+ + LP S ER V ++G D + A+ I CLI S G T Y P
Sbjct: 240 NFAISMIASKSFLPGSNERLVELQGTVDDLYDALRIISRCLIEDFSSSVGTTTYYVP 296
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS---- 54
+ KE G +IG++G+ + +REE+ +K IS + T ERI+TV G +D +A S
Sbjct: 124 VSAKEAGCLIGQNGKVIDSIREETNTKAGISRLIAGTHERILTVSGKLDDCAKALSYFAQ 183
Query: 55 -LITKNIEEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
L+ +IE ++ K L E + LRL++P SQ G++IG G++I+ I+
Sbjct: 184 ALLGSSIETYNYFPLKQLSSTPCVEHETTILRLLIPNSQMGTLIGARGARIQQIQHNFAI 243
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 162
S+ + LP S ER V ++G D + A+ I CLI S G T Y P
Sbjct: 244 SMIASKSFLPGSNERLVELQGTVDDLYDALRIISRCLIEDFSSSVGTTTYYVP 296
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 313
K++Q + T ++ PN+++GA+IGK G++I +RK+SGAMI I E E S++R T
Sbjct: 297 KSHQLTRKSTATISFPNDMVGALIGKNGSRIQGVRKVSGAMIGI---GEAVEGSDERVFT 353
Query: 314 MTGTPDAIALAQYLINMSVE 333
+TGT A+ A+ L+ ++E
Sbjct: 354 ITGTQQAVEKAKSLLYHNLE 373
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 699 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 758
K++Q + T ++ PN+++GA+IGK G++I +RK+SGAMI I E E S++R T
Sbjct: 297 KSHQLTRKSTATISFPNDMVGALIGKNGSRIQGVRKVSGAMIGI---GEAVEGSDERVFT 353
Query: 759 MTGTPDAIALAQYLINMSVE 778
+TGT A+ A+ L+ ++E
Sbjct: 354 ITGTQQAVEKAKSLLYHNLE 373
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ ++G++IG G +++++ + S S P ER+V + G++D L+ A
Sbjct: 214 LRLLIPNSQMGTLIGARGARIQQIQHNFAISMIASKSFLPGSNERLVELQGTVDDLYDAL 273
Query: 499 SLITKN-IEEFHKNQNKHLGGNGESQLIQLR----LIVPASQCGSIIGKGGSQIKTIRET 553
+I++ IE+F + +S + + + P G++IGK GS+I+ +R+
Sbjct: 274 RIISRCLIEDFSSSVGTTTYYVPKSHQLTRKSTATISFPNDMVGALIGKNGSRIQGVRKV 333
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
SGA + + + + S ER I G AV +A
Sbjct: 334 SGAMIGIG-EAVEGSDERVFTITGTQQAVEKA 364
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKN-I 60
++G++IG G +++++ + S S P ER+V + G++D L+ A +I++ I
Sbjct: 222 QMGTLIGARGARIQQIQHNFAISMIASKSFLPGSNERLVELQGTVDDLYDALRIISRCLI 281
Query: 61 EEFHKNQNKHLGGNGESQLIQLR----LIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
E+F + +S + + + P G++IGK GS+I+ +R+ SGA + +
Sbjct: 282 EDFSSSVGTTTYYVPKSHQLTRKSTATISFPNDMVGALIGKNGSRIQGVRKVSGAMIGIG 341
Query: 117 SDMLPNSTEREVNIKGVPDAVTQA 140
+ + S ER I G AV +A
Sbjct: 342 -EAVEGSDERVFTITGTQQAVEKA 364
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 148/621 (23%), Positives = 261/621 (42%), Gaps = 155/621 (24%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSM----DSLFRAFSLITKN 59
+GS+IGKSG+ + +R+E+ ++I + D ER++T+ S+ D + +S + +
Sbjct: 55 MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIVDIEYSELDYS 114
Query: 60 IE---------EFHKNQNKHLGGNGESQLI------QLRLIVPASQCGSIIGKGGSQIKT 104
+ + H L E+ I + RL+VP+SQC +IGK GS IK
Sbjct: 115 VPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSIIKN 174
Query: 105 IRETSGASVYV----ASDMLPNST-----EREVNIKGVPDAVTQAIYQICLIMVDSPPKG 155
IR + A+V V ASD P+ T + V I G ++V +A++ + IM P+
Sbjct: 175 IRGRTRANVKVVSKDASD--PSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPR- 231
Query: 156 ATIPYRPLPQNAGGPGLIGNQFGM---------QNSLM---------------GAPDMGN 191
IP Q +I + + Q+S+ G +
Sbjct: 232 EQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGTLPQGYGENAA 291
Query: 192 NPLAGLAA------LGLGGNS----------------GGGMG-GGLNAAALAALASSQLK 228
NPL +A G GG+S G +G GGL + + S ++
Sbjct: 292 NPLPVFSASALPVVHGFGGSSRSEKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIE 351
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPS--------------QKTNQQ-QNQITKEMTVPNELI 273
N R + + + P +K N + ++++ ++ V +++I
Sbjct: 352 VND-SRTNHDDDCVITVTATESPDDLKSMAVEAVLLLQEKINDEDEDKVKMQLLVSSKVI 410
Query: 274 GAVIGKGGTKIFEIRKISGAMIRISK--SSEEEEDSNDRTITMTGTPDAI--ALAQYLIN 329
G +IGK G+ I EIRK + A I ISK ++ + D ND + ++G + AL Q ++
Sbjct: 411 GCIIGKSGSIISEIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLR 470
Query: 330 MSVELLRANLNGEGGGESNMDDFSSDNNLPSSAP----------LAGLNASNPLAAALPQ 379
+ ++LR G S N P+ + GL +++PQ
Sbjct: 471 LRDDVLRDRETG------------SRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQ 518
Query: 380 LAQI--LTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGG--------FGGVPQGPN 429
+A + +P ++++ L + GG + G GS G+ + G +GG+P
Sbjct: 519 VASVDFDRRPETGSSMSMLPSSGG---IYGYGSFPVGNTSYGSNSSYSSNLYGGLP---- 571
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTV 487
Q+T ++ R + VG ++G+ G + +R SG+ I ISDS R+ +
Sbjct: 572 ----QSTTMEVR----IPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALI 623
Query: 488 IG------SMDSLFRAFSLIT 502
G + ++LF+AF + T
Sbjct: 624 SGTSEQKRTAENLFQAFIMST 644
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 167/388 (43%), Gaps = 85/388 (21%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSM----DSLFRAFSLITKN 504
+GS+IGKSG+ + +R+E+ ++I + D ER++T+ S+ D + +S + +
Sbjct: 55 MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIVDIEYSELDYS 114
Query: 505 IE---------EFHKNQNKHLGGNGESQLI------QLRLIVPASQCGSIIGKGGSQIKT 549
+ + H L E+ I + RL+VP+SQC +IGK GS IK
Sbjct: 115 VPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSIIKN 174
Query: 550 IRETSGASVYV----ASDMLPNST-----EREVNIKGVPDAVTQAIYQICLIMVDSPPKG 600
IR + A+V V ASD P+ T + V I G ++V +A++ + IM P+
Sbjct: 175 IRGRTRANVKVVSKDASD--PSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPR- 231
Query: 601 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGL-----AALGLGGNSGGGM 655
IP Q S++ D+ P AGL + G N +
Sbjct: 232 EQIPLDTTVQEVPA------------SIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFI 279
Query: 656 GG-----GLNAA-ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 709
G G NAA L ++S L H ++++ ++
Sbjct: 280 GTLPQGYGENAANPLPVFSASALPVVHGFGGSSRSE--------------------KLAI 319
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ + IG VIGKGG I IR+ SG+ I ++ S +D T+T T +PD
Sbjct: 320 KVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDD---- 375
Query: 770 QYLINMSVE---LLRANLNGEGGGESNM 794
L +M+VE LL+ +N E + M
Sbjct: 376 --LKSMAVEAVLLLQEKINDEDEDKVKM 401
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 35/189 (18%)
Query: 420 GFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS 479
GFGG + A ++ I ++G +IGK G T+K +R+ SGS I ++DS
Sbjct: 307 GFGGSSRSEKLA----------IKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSR 356
Query: 480 T---PERIVTVIG--SMDSL----FRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLI 530
T + ++TV S D L A L+ + I + ++++K ++++L+
Sbjct: 357 TNHDDDCVITVTATESPDDLKSMAVEAVLLLQEKIND--EDEDK----------VKMQLL 404
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVAS-DMLPNST---EREVNIKGVPDAVTQAI 586
V + G IIGK GS I IR+ + A ++++ + P S + V I G V A+
Sbjct: 405 VSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSNVRDAL 464
Query: 587 YQICLIMVD 595
QI L + D
Sbjct: 465 IQIVLRLRD 473
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 25/159 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSST---PERIVTVIG--SMDSL----FRAFSL 55
++G +IGK G T+K +R+ SGS I ++DS T + ++TV S D L A L
Sbjct: 327 KIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAVLL 386
Query: 56 ITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+ + I + ++++K ++++L+V + G IIGK GS I IR+ + A +++
Sbjct: 387 LQEKIND--EDEDK----------VKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHI 434
Query: 116 AS-DMLPNST---EREVNIKGVPDAVTQAIYQICLIMVD 150
+ + P S + V I G V A+ QI L + D
Sbjct: 435 SKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRD 473
>gi|45198501|ref|NP_985530.1| AFL018Cp [Ashbya gossypii ATCC 10895]
gi|44984452|gb|AAS53354.1| AFL018Cp [Ashbya gossypii ATCC 10895]
gi|374108759|gb|AEY97665.1| FAFL018Cp [Ashbya gossypii FDAG1]
Length = 392
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 168/363 (46%), Gaps = 36/363 (9%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
MR + K+ ++G GE + +++ E+G++I +S++ + PER+V + GS +++ +AF
Sbjct: 50 MRMLCLVKDASMVVGHKGERISRIKLETGTRINVSENIKNVPERVVFLRGSCENVAKAFG 109
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
I++ I N N S + + L+VP G +IGK GS+++ I + S A +
Sbjct: 110 KISRAI-----NDEDDRESNDRSLPLTVNLLVPHHLMGYVIGKQGSRLREIEDLSAARLV 164
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK---GATIPYRPLPQNAGGPG 616
LP S +R + I GV DA+ A Y + ++ PK TI Y+P +
Sbjct: 165 AGPQQLPLSNDRVLCITGVADAIHIATYYVGQTILSCEPKYRARKTIFYQP----SAMHS 220
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
++ N +G+ ++ +P G+ + + AL + + ++
Sbjct: 221 VLVNNYGI--AIQHQQHHQYHP----------GDKAKRSRSRM-SPALPPTPNEVVFHSY 267
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNEL------IGAVIGKGGTKIF 730
+P + NN P + + N T+ +V E+ +G VIG+GG I
Sbjct: 268 LPLGAPVPGSLAVANNLALPHVRIVEGINPQTRITSVVQEIFIEELMVGNVIGRGGKNIT 327
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+I++ +G I+I ++ ++R +T+ GTP A +IN +++ + N +
Sbjct: 328 QIKESTGCSIQI---ADPVPGKDERKLTIIGTPIGNQTAVMMINNKIDIDKRNQHNRHSQ 384
Query: 791 ESN 793
+ N
Sbjct: 385 QHN 387
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 165/356 (46%), Gaps = 36/356 (10%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ ++G GE + +++ E+G++I +S++ + PER+V + GS +++ +AF I++ I
Sbjct: 57 KDASMVVGHKGERISRIKLETGTRINVSENIKNVPERVVFLRGSCENVAKAFGKISRAI- 115
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
N N S + + L+VP G +IGK GS+++ I + S A + LP
Sbjct: 116 ----NDEDDRESNDRSLPLTVNLLVPHHLMGYVIGKQGSRLREIEDLSAARLVAGPQQLP 171
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK---GATIPYRPLPQNAGGPGLIGNQFG 178
S +R + I GV DA+ A Y + ++ PK TI Y+P + ++ N +G
Sbjct: 172 LSNDRVLCITGVADAIHIATYYVGQTILSCEPKYRARKTIFYQP----SAMHSVLVNNYG 227
Query: 179 MQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
+ ++ +P G+ + + AL + + +++P
Sbjct: 228 I--AIQHQQHHQYHP----------GDKAKRSRSRM-SPALPPTPNEVVFHSYLPLGAPV 274
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNEL------IGAVIGKGGTKIFEIRKISG 292
+ NN P + + N T+ +V E+ +G VIG+GG I +I++ +G
Sbjct: 275 PGSLAVANNLALPHVRIVEGINPQTRITSVVQEIFIEELMVGNVIGRGGKNITQIKESTG 334
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESN 348
I+I ++ ++R +T+ GTP A +IN +++ + N + + N
Sbjct: 335 CSIQI---ADPVPGKDERKLTIIGTPIGNQTAVMMINNKIDIDKRNQHNRHSQQHN 387
>gi|341894976|gb|EGT50911.1| hypothetical protein CAEBREN_13773 [Caenorhabditis brenneri]
Length = 397
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K G+IIGK GE +K+LR E + + + DS+TPER+ TV ++ +
Sbjct: 52 VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDV 111
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+E+ E ++R+++ S G++IG+ GS+IK +RE A + +
Sbjct: 112 LPRLED----------NFSERDPCEVRMLIHQSHAGALIGRNGSKIKELREKCSARLKIF 161
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P ST+R + G V I ++ + + P KG+ PY P
Sbjct: 162 TGCAPGSTDRVLITSGEQKNVLAIIEEVMRELKEIPIKGSATPYLP 207
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
K G+IIGK GE +K+LR E + + + DS+TPER+ TV ++ + +E+
Sbjct: 59 KSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLED- 117
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
E ++R+++ S G++IG+ GS+IK +RE A + + + P S
Sbjct: 118 ---------NFSERDPCEVRMLIHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGS 168
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
T+R + G V I ++ + + P KG+ PY P
Sbjct: 169 TDRVLITSGEQKNVLAIIEEVMRELKEIPIKGSATPYLP 207
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-TPERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
G+IIG+ GE + ++R++SG++I + S+ PERI+T+ G+ + A L+ + + +
Sbjct: 329 GTIIGRGGERIARIRQDSGAQITLEPSNGQPERIITIKGTEQQIHSAQYLLQQCVRNSTQ 388
Query: 66 NQNKHLGGN 74
+ + GGN
Sbjct: 389 GRER-FGGN 396
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-TPERIVTVIGSMDSLFRAFSLITKNIEEFHK 510
G+IIG+ GE + ++R++SG++I + S+ PERI+T+ G+ + A L+ + + +
Sbjct: 329 GTIIGRGGERIARIRQDSGAQITLEPSNGQPERIITIKGTEQQIHSAQYLLQQCVRNSTQ 388
Query: 511 NQNKHLGGN 519
+ + GGN
Sbjct: 389 GRER-FGGN 396
>gi|403418461|emb|CCM05161.1| predicted protein [Fibroporia radiculosa]
Length = 326
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V LR+ +G K +S ER++TV GS++ + +A++
Sbjct: 30 LRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGVSKVVPGVHERVLTVSGSVEGVAKAYA 89
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
LI + N + + N +RL++ + GS+IG+ G +IK I++ SGA +
Sbjct: 90 LIVSQL--VSANPSSPVSPNSPPPNTAIRLLISHNLMGSVIGRNGLKIKAIQDASGARMV 147
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRP 607
+ DMLP STER V ++G +++ +AI +I +++ +G T+ + P
Sbjct: 148 ASKDMLPQSTERIVEVQGSSESIGRAIEEIGRCLLEDWERGQGTVLFHP 196
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V LR+ +G K +S ER++TV GS++ + +A++LI +
Sbjct: 37 KDAGVIIGKAGKNVADLRDHTGVKAGVSKVVPGVHERVLTVSGSVEGVAKAYALIVSQL- 95
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
N + + N +RL++ + GS+IG+ G +IK I++ SGA + + DMLP
Sbjct: 96 -VSANPSSPVSPNSPPPNTAIRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASKDMLP 154
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG-ATIPYRP 162
STER V ++G +++ +AI +I +++ +G T+ + P
Sbjct: 155 QSTERIVEVQGSSESIGRAIEEIGRCLLEDWERGQGTVLFHP 196
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 10/108 (9%)
Query: 234 RNQNQNQNQHNRNNRDG--------PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 285
R+ ++ N R N D P+ Q N T+ +++P++++G +IG+ GTKI
Sbjct: 202 RSGRRSSNASRRYNGDAGRGRTSPSPNAPLQQPTNLRTQNISIPSDMVGCIIGRNGTKIT 261
Query: 286 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
EIR++SG+ I I+K E +++ +R T+ GTP+A A +L+ +E
Sbjct: 262 EIRRLSGSKISIAK--EPHDETGERMFTIVGTPEANEKALFLLYNQLE 307
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 10/108 (9%)
Query: 679 RNQNQNQNQHNRNNRDG--------PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 730
R+ ++ N R N D P+ Q N T+ +++P++++G +IG+ GTKI
Sbjct: 202 RSGRRSSNASRRYNGDAGRGRTSPSPNAPLQQPTNLRTQNISIPSDMVGCIIGRNGTKIT 261
Query: 731 EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
EIR++SG+ I I+K E +++ +R T+ GTP+A A +L+ +E
Sbjct: 262 EIRRLSGSKISIAK--EPHDETGERMFTIVGTPEANEKALFLLYNQLE 307
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 40/186 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ +GS+IG++G +K +++ SG+++ S P ERIV V GS +S+ RA
Sbjct: 115 IRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGSSESIGRAI 174
Query: 499 SLITKNIEE----------FH----------KNQNKHLGGNGES--------------QL 524
I + + E FH ++ N NG++ Q
Sbjct: 175 EEIGRCLLEDWERGQGTVLFHPGSGDERSGRRSSNASRRYNGDAGRGRTSPSPNAPLQQP 234
Query: 525 IQLR---LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
LR + +P+ G IIG+ G++I IR SG+ + +A + + ER I G P+A
Sbjct: 235 TNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEA 294
Query: 582 VTQAIY 587
+A++
Sbjct: 295 NEKALF 300
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 40/177 (22%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
+GS+IG++G +K +++ SG+++ S P ERIV V GS +S+ RA I + + E
Sbjct: 124 MGSVIGRNGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGSSESIGRAIEEIGRCLLE 183
Query: 63 ----------FH----------KNQNKHLGGNGES--------------QLIQLR---LI 85
FH ++ N NG++ Q LR +
Sbjct: 184 DWERGQGTVLFHPGSGDERSGRRSSNASRRYNGDAGRGRTSPSPNAPLQQPTNLRTQNIS 243
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+P+ G IIG+ G++I IR SG+ + +A + + ER I G P+A +A++
Sbjct: 244 IPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALF 300
>gi|154794961|gb|ABS86516.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 252
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 36/270 (13%)
Query: 37 ERIVTVIGSMDSLFRAFSLITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 94
+R+++V G ++ + +A+S++ I + + +R++V + GSI
Sbjct: 5 DRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSI 64
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 152
IG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI++I CL M D
Sbjct: 65 IGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWE 123
Query: 153 PKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 211
T+ Y+P A GP G+ G + G G G SGG M
Sbjct: 124 RAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRAGSGVPSGGHMS 180
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------I 262
G + P +N N H+ N +G + N +
Sbjct: 181 GDV------------------PGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 222
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
T+ +++P +++G +IGKGG KI EIR++SG
Sbjct: 223 TQNISIPADMVGCIIGKGGAKINEIRRMSG 252
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 36/270 (13%)
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
+R+++V G ++ + +A+S++ I + + +R++V + GSI
Sbjct: 5 DRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSI 64
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 597
IG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI++I CL M D
Sbjct: 65 IGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWE 123
Query: 598 PKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
T+ Y+P A GP G+ G + G G G SGG M
Sbjct: 124 RAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRAGSGVPSGGHMS 180
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------I 707
G + P +N N H+ N +G + N +
Sbjct: 181 GDV------------------PGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 222
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
T+ +++P +++G +IGKGG KI EIR++SG
Sbjct: 223 TQNISIPADMVGCIIGKGGAKINEIRRMSG 252
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ V + L+G++IG+ G+KI EI+ SG +R+ S E S +R + + G+P+AI +A
Sbjct: 53 RVLVSHNLMGSIIGRQGSKIKEIQDTSG--VRMVASKEMLPQSTERVVEVQGSPEAIRVA 110
Query: 325 QYLI 328
+ I
Sbjct: 111 IHEI 114
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ V + L+G++IG+ G+KI EI+ SG +R+ S E S +R + + G+P+AI +A
Sbjct: 53 RVLVSHNLMGSIIGRQGSKIKEIQDTSG--VRMVASKEMLPQSTERVVEVQGSPEAIRVA 110
Query: 770 QYLI 773
+ I
Sbjct: 111 IHEI 114
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 145/619 (23%), Positives = 260/619 (42%), Gaps = 151/619 (24%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSM----DSLFRAFSLITKN 59
+GS+IGKSG+ + +R+E+ ++I + D ER++T+ S+ D + +S + +
Sbjct: 55 MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIVDIEYSELDYS 114
Query: 60 IE---------EFHKNQNKHLGGNGESQLI------QLRLIVPASQCGSIIGKGGSQIKT 104
+ + H L E+ I + RL+VP+SQC +IGK GS IK
Sbjct: 115 VPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSIIKN 174
Query: 105 IRETSGASVYVASDML--PNST-----EREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 157
IR + A+V V S + P+ T + V I G ++V +A++ + IM P+
Sbjct: 175 IRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPR-EQ 233
Query: 158 IPYRPLPQNAGGPGLIGNQFGM---------QNSLM---------------GAPDMGNNP 193
IP Q +I + + Q+S+ G + NP
Sbjct: 234 IPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGTLPQGYGENAANP 293
Query: 194 LAGLAA------LGLGGNS----------------GGGMG-GGLNAAALAALASSQLKTN 230
+ +A G GG+S G +G GGL + + S ++ N
Sbjct: 294 VPVFSASALPVVHGFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVN 353
Query: 231 HMPRNQNQNQNQHNRNNRDGPS--------------QKTN-QQQNQITKEMTVPNELIGA 275
R + + + P +K N + ++++ ++ V +++IG
Sbjct: 354 D-SRTNHDDDCVITVTATESPDDLKSMAVEAVLLLQEKINDEDEDKVKMQLLVSSKVIGC 412
Query: 276 VIGKGGTKIFEIRKISGAMIRISK--SSEEEEDSNDRTITMTGTPDAI--ALAQYLINMS 331
+IGK G+ I EIRK + A I ISK ++ + D ND + ++G + AL Q ++ +
Sbjct: 413 IIGKSGSIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLR 472
Query: 332 VELLRANLNGEGGGESNMDDFSSDNNLPSSAP----------LAGLNASNPLAAALPQLA 381
++LR G S N P+ + GL +++PQ+A
Sbjct: 473 DDVLRDRETG------------SRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVA 520
Query: 382 QIL--TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGG--------FGGVPQGPNYA 431
+ +P ++++ L + GG + G GS G+ + G +GG+P
Sbjct: 521 SVDFNRRPETGSSMSMLPSSGG---IYGYGSFPVGNTSYGSNSSYSSNLYGGLP------ 571
Query: 432 NIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIG 489
Q+T ++ R + VG ++G+ G + +R SG+ I ISDS R+ + G
Sbjct: 572 --QSTTMEVR----IPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISG 625
Query: 490 ------SMDSLFRAFSLIT 502
+ ++LF+AF + T
Sbjct: 626 TSEQKRTAENLFQAFIMST 644
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 81/386 (20%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSM----DSLFRAFSLITKN 504
+GS+IGKSG+ + +R+E+ ++I + D ER++T+ S+ D + +S + +
Sbjct: 55 MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIVDIEYSELDYS 114
Query: 505 IE---------EFHKNQNKHLGGNGESQLI------QLRLIVPASQCGSIIGKGGSQIKT 549
+ + H L E+ I + RL+VP+SQC +IGK GS IK
Sbjct: 115 VPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSIIKN 174
Query: 550 IRETSGASVYVASDML--PNST-----EREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 602
IR + A+V V S + P+ T + V I G ++V +A++ + IM P+
Sbjct: 175 IRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPR-EQ 233
Query: 603 IPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGL-----AALGLGGNSGGGMGG 657
IP Q S++ D+ P AGL + G N +G
Sbjct: 234 IPLDTTVQEVPA------------SIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGT 281
Query: 658 -----GLNAA-ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEM 711
G NAA + ++S L H ++++ ++ ++
Sbjct: 282 LPQGYGENAANPVPVFSASALPVVHGFGGSSRSE--------------------KLAIKV 321
Query: 712 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 771
+ IG VIGKGG I IR+ SG+ I ++ S +D T+T T +PD
Sbjct: 322 ICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDD------ 375
Query: 772 LINMSVE---LLRANLNGEGGGESNM 794
L +M+VE LL+ +N E + M
Sbjct: 376 LKSMAVEAVLLLQEKINDEDEDKVKM 401
>gi|170572668|ref|XP_001892191.1| KH domain containing protein [Brugia malayi]
gi|158602643|gb|EDP38991.1| KH domain containing protein [Brugia malayi]
Length = 106
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 45/146 (30%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
EVGSIIGK G+ +K +R++SG+KI ISD S PERIVT+ GS+ ++ +AF +I ++
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSIGTINKAFGMICAKLQ--- 57
Query: 65 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 124
+ +GAS+ VAS+MLP+ST
Sbjct: 58 ------------------------------------------QATGASIQVASEMLPSST 75
Query: 125 EREVNIKGVPDAVTQAIYQICLIMVD 150
ER V I G D++ + IC I+++
Sbjct: 76 ERAVTISGSADSIVDCMRNICQILLE 101
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 45/146 (30%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 509
EVGSIIGK G+ +K +R++SG+KI ISD S PERIVT+ GS+ ++ +AF +I ++
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSIGTINKAFGMICAKLQ--- 57
Query: 510 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST 569
+ +GAS+ VAS+MLP+ST
Sbjct: 58 ------------------------------------------QATGASIQVASEMLPSST 75
Query: 570 EREVNIKGVPDAVTQAIYQICLIMVD 595
ER V I G D++ + IC I+++
Sbjct: 76 ERAVTISGSADSIVDCMRNICQILLE 101
>gi|324500869|gb|ADY40396.1| Far upstream element-binding protein 1 [Ascaris suum]
Length = 581
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK GET+K+L ESG+KI D +TP+R + G+ + + +A I++ +
Sbjct: 237 VGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELV-- 294
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
NK G+G + VPA++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 295 -----NKSGAGSGAEIFY---MHVPANKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 346
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
S+E+ IKG P + A + I + + D P
Sbjct: 347 SSEKVFIIKGTPYQIHHAQHIIRIKVGDISP 377
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK GET+K+L ESG+KI D +TP+R + G+ + + +A I++ +
Sbjct: 237 VGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELV-- 294
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
NK G+G + VPA++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 295 -----NKSGAGSGAEIFY---MHVPANKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 346
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
S+E+ IKG P + A + I + + D P
Sbjct: 347 SSEKVFIIKGTPYQIHHAQHIIRIKVGDISP 377
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+ GE + +++ +S ++ +S S R T+ G+ ++ RA S+I I
Sbjct: 45 VGLVIGRGGEQISQIQSQSNCRVQMSPESDGNNMRQCTLQGTKMAVERAKSMIQDVIARA 104
Query: 64 ----HKNQNKHLGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
N+ GG +G + I +++P ++CG +IGKGG IK I+E +G + + +
Sbjct: 105 GNRPPPNRGHFDGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQE 164
Query: 119 MLPNSTE-REVNIKGVPDAVTQA---IYQICLIMVDSPP 153
+ + + + I G PD V A + I D PP
Sbjct: 165 TQESGGQPKPLRIIGEPDKVDTARRMVEDILQSREDHPP 203
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+ GE + +++ +S ++ +S S R T+ G+ ++ RA S+I I
Sbjct: 45 VGLVIGRGGEQISQIQSQSNCRVQMSPESDGNNMRQCTLQGTKMAVERAKSMIQDVIARA 104
Query: 509 ----HKNQNKHLGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
N+ GG +G + I +++P ++CG +IGKGG IK I+E +G + + +
Sbjct: 105 GNRPPPNRGHFDGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQE 164
Query: 564 MLPNSTE-REVNIKGVPDAVTQA---IYQICLIMVDSPP 598
+ + + + I G PD V A + I D PP
Sbjct: 165 TQESGGQPKPLRIIGEPDKVDTARRMVEDILQSREDHPP 203
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS-------TPERIVTVIGSMDSLFRAFSL 55
G + G +IGK GET+K ++E++G K+ + + P RI+ +D+ R
Sbjct: 134 GAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQPKPLRIIGEPDKVDTARRMVED 193
Query: 56 ITKNIEEF--------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
I ++ E+ + + G G Q +IVP + G IIGKGG IK +
Sbjct: 194 ILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEVIVPRASVGMIIGKGGETIKRLAA 253
Query: 108 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGATIPYRPLPQN 166
SGA + D + +R I+G + + +A I L+ GA I Y +P N
Sbjct: 254 ESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELVNKSGAGSGAEIFYMHVPAN 313
Query: 167 AGG 169
G
Sbjct: 314 KTG 316
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
M VP G VIGKGG I +I SGA + +S+ + +S+++ + GTP I AQ
Sbjct: 308 MHVPANKTGLVIGKGGETIKQICAESGAHVELSR--DPPPNSSEKVFIIKGTPYQIHHAQ 365
Query: 326 YLINMSV 332
++I + V
Sbjct: 366 HIIRIKV 372
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
M VP G VIGKGG I +I SGA + +S+ + +S+++ + GTP I AQ
Sbjct: 308 MHVPANKTGLVIGKGGETIKQICAESGAHVELSR--DPPPNSSEKVFIIKGTPYQIHHAQ 365
Query: 771 YLINMSV 777
++I + V
Sbjct: 366 HIIRIKV 372
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP +G +IGKGG I + SGA I+ +E++ + DR + GT + IA A
Sbjct: 229 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 286
Query: 325 QYLINMSVELLRANLNGEGGG 345
I+ EL+ N +G G G
Sbjct: 287 TQFIS---ELV--NKSGAGSG 302
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP +G +IGKGG I + SGA I+ +E++ + DR + GT + IA A
Sbjct: 229 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 286
Query: 770 QYLINMSVELLRANLNGEGGG 790
I+ EL+ N +G G G
Sbjct: 287 TQFIS---ELV--NKSGAGSG 302
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSNDRTITMTGTPD 319
QIT EM +P G VIGKGG I I++ +G M+ I ++ +E + + + G PD
Sbjct: 125 QITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQET--QESGGQPKPLRIIGEPD 182
Query: 320 AIALAQYLIN 329
+ A+ ++
Sbjct: 183 KVDTARRMVE 192
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSNDRTITMTGTPD 764
QIT EM +P G VIGKGG I I++ +G M+ I ++ +E + + + G PD
Sbjct: 125 QITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQET--QESGGQPKPLRIIGEPD 182
Query: 765 AIALAQYLIN 774
+ A+ ++
Sbjct: 183 KVDTARRMVE 192
>gi|291392572|ref|XP_002712680.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Oryctolagus
cuniculus]
Length = 469
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 27/185 (14%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKN 504
++Q K G+++GK G+T+K LR + + + + DSS PERI+++ +++ I
Sbjct: 48 LLQSKNAGAVLGKGGKTIKALRIDYNASVSVPDSSGPERILSISADTETVGEILKKIIPT 107
Query: 505 IEE----------------------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+EE H + K G +LRL++ G IIG
Sbjct: 108 LEEGLQLPSPTATSQLPLESDAVECLHYHHFK-----GSDFDCELRLLIHQRLAGGIIGV 162
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 602
G++IK +RE + ++ + + P+ST+R I+G PD V + I I ++ +SP KG
Sbjct: 163 KGAKIKELRENTQTTIKLFQECCPHSTDRVALIRGKPDRVVECIKIILDLISESPIKGRA 222
Query: 603 IPYRP 607
PY P
Sbjct: 223 QPYDP 227
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 27/184 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G+++GK G+T+K LR + + + + DSS PERI+++ +++ I +
Sbjct: 49 LQSKNAGAVLGKGGKTIKALRIDYNASVSVPDSSGPERILSISADTETVGEILKKIIPTL 108
Query: 61 EE----------------------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 98
EE H + K G +LRL++ G IIG
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLHYHHFK-----GSDFDCELRLLIHQRLAGGIIGVK 163
Query: 99 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
G++IK +RE + ++ + + P+ST+R I+G PD V + I I ++ +SP KG
Sbjct: 164 GAKIKELRENTQTTIKLFQECCPHSTDRVALIRGKPDRVVECIKIILDLISESPIKGRAQ 223
Query: 159 PYRP 162
PY P
Sbjct: 224 PYDP 227
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++TVP +L G +I KG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 394 ITTQVTVPKDLAGFIICKGAQQIKQIRHESGASIKI---DEPLEGSKDRIITITGTQDQI 450
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 451 QNAQYLLQNSVK 462
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++TVP +L G +I KG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 394 ITTQVTVPKDLAGFIICKGAQQIKQIRHESGASIKI---DEPLEGSKDRIITITGTQDQI 450
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 451 QNAQYLLQNSVK 462
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ VP G II KG QIK IR SGAS+ + + L S +R + I G D +
Sbjct: 393 IITTQVTVPKDLAGFIICKGAQQIKQIRHESGASIKI-DEPLEGSKDRIITITGTQDQIQ 451
Query: 139 QAIY 142
A Y
Sbjct: 452 NAQY 455
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ VP G II KG QIK IR SGAS+ + + L S +R + I G D +
Sbjct: 393 IITTQVTVPKDLAGFIICKGAQQIKQIRHESGASIKI-DEPLEGSKDRIITITGTQDQIQ 451
Query: 584 QAIY 587
A Y
Sbjct: 452 NAQY 455
>gi|6687391|emb|CAB64936.1| heterogeneous nuclear ribonucleoprotein (hnRNP) [Drosophila
melanogaster]
Length = 496
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ G++IGK G+ ++K+R + + + + DS PER + + ++S + +
Sbjct: 25 VRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEM 84
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 560
K EE ++ +RL++ S G +IGKGG +IK IR+ G + V
Sbjct: 85 LKYFEERDED-------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKV 131
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
S++ P ST+R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 132 FSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 422 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 478
Query: 323 LAQYLINMSVE 333
+AQYL+ SV
Sbjct: 479 MAQYLLQQSVH 489
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 422 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 478
Query: 768 LAQYLINMSVE 778
+AQYL+ SV
Sbjct: 479 MAQYLLQQSVH 489
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 125/523 (23%), Positives = 211/523 (40%), Gaps = 110/523 (21%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEE---EEDSNDRTITMTGTPDAIALAQYLIN 329
+G V+GKGG + +R+ GA IR+ ++ E+ D I ++G+ + A ++
Sbjct: 120 VGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVS 179
Query: 330 MSVELLRANLNGEGGGESNMDDFSSD-NNLPSSAPLAGLNASNPLAAALPQLAQILTKPG 388
++ D+ D +N+P P GL S G
Sbjct: 180 TCLQ----------------DNPRPDTHNIPIGRPF-GLPGSGT---------------G 207
Query: 389 ALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQG 448
+ S L + + N+G P GP + Q R I+
Sbjct: 208 CPPGMDPHSQRSYLPPHIPDYHTRNYPSNAG-----PPGPRFFFEQEIV----FRMIILN 258
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMDSLFR 496
+ VGSIIGK G T++ L+ E+G+ I I + + + ER+V + + D++ R
Sbjct: 259 EMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSDMLHSPAQDAVVR 318
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
+S I+ E +++ H RL+VP+ G ++GKGGS I +R+ +GA
Sbjct: 319 VYSRIS----EASIDRSSHTPA---------RLLVPSQHIGCLLGKGGSIISEMRKITGA 365
Query: 557 SVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSPPKGATIPYRP 607
++ + ++ +P +R V + G ++ A+ I +I+ P G PY P
Sbjct: 366 NIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPP 425
Query: 608 -----------------LPQNAGGPGLIGNQFGMQNSLMGAPDMGNN---PLAGLAALG- 646
L + G P + F ++ MG +MG++ P+ + +G
Sbjct: 426 VGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPF-RPDAPMGHFEMGDHRPPPVHSMEYMGA 484
Query: 647 -----LGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQNQNQHNRNNRDGPSQKT 700
L G GG L + +TN +PRN + + R GP
Sbjct: 485 DRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRNMSDAVPA--TDFRKGPVAIE 542
Query: 701 NQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 742
NQ T E+ +P IG V G G++I EI K+SGA I +
Sbjct: 543 NQVATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITV 585
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 149/341 (43%), Gaps = 65/341 (19%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMDSLFRAF 53
VGSIIGK G T++ L+ E+G+ I I + + + ER+V + + D++ R +
Sbjct: 261 VGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSDMLHSPAQDAVVRVY 320
Query: 54 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
S I+ E +++ H RL+VP+ G ++GKGGS I +R+ +GA++
Sbjct: 321 SRIS----EASIDRSSHTPA---------RLLVPSQHIGCLLGKGGSIISEMRKITGANI 367
Query: 114 YV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSPPKGATIPYRP-- 162
+ ++ +P +R V + G ++ A+ I +I+ P G PY P
Sbjct: 368 RIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVG 427
Query: 163 ---------------LPQNAGGPGLIGNQFGMQNSLMGAPDMGNN---PLAGLAALG--- 201
L + G P + F ++ MG +MG++ P+ + +G
Sbjct: 428 NIPVHQSRQEQPPPHLHPSGGMPPYPMHPF-RPDAPMGHFEMGDHRPPPVHSMEYMGADR 486
Query: 202 ---LGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQNQNQNQHNRNNRDGPSQKTNQ 257
L G GG L + +TN +PRN + + R GP NQ
Sbjct: 487 MPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRNMSDAVPA--TDFRKGPVAIENQ 544
Query: 258 QQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
T E+ +P IG V G G++I EI K+SGA I +
Sbjct: 545 VATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITV 585
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 125/306 (40%), Gaps = 63/306 (20%)
Query: 68 NKHLGGNGESQLIQ----LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLP 121
++ +GG E + + R++ Q G ++GKGG ++ +R+ GA + V + LP
Sbjct: 93 DEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLP 152
Query: 122 NST---EREVNIKGVPDAVTQAIYQICLIMVDSP-PKGATIPY-RPL------------- 163
+ ++I G V +A+ + + D+P P IP RP
Sbjct: 153 PWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIGRPFGLPGSGTGCPPGM 212
Query: 164 ---------------------PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGL 202
P NAG PG +F + ++ + N + + +G
Sbjct: 213 DPHSQRSYLPPHIPDYHTRNYPSNAGPPG---PRFFFEQEIVFRMIILNEMVGSI--IGK 267
Query: 203 GGNSGGGMGGGLNAAA--LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP-------SQ 253
GG++ + A L +A S + + +N + + +D S+
Sbjct: 268 GGSTIRALQSETGACIKILEPVADSDERVVAI--TARENSDMLHSPAQDAVVRVYSRISE 325
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRT 311
+ + + + VP++ IG ++GKGG+ I E+RKI+GA IRI ++ ND
Sbjct: 326 ASIDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEM 385
Query: 312 ITMTGT 317
+ +TG+
Sbjct: 386 VQVTGS 391
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 125/306 (40%), Gaps = 63/306 (20%)
Query: 513 NKHLGGNGESQLIQ----LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLP 566
++ +GG E + + R++ Q G ++GKGG ++ +R+ GA + V + LP
Sbjct: 93 DEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLP 152
Query: 567 NST---EREVNIKGVPDAVTQAIYQICLIMVDSP-PKGATIPY-RPL------------- 608
+ ++I G V +A+ + + D+P P IP RP
Sbjct: 153 PWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIGRPFGLPGSGTGCPPGM 212
Query: 609 ---------------------PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGL 647
P NAG PG +F + ++ + N + + +G
Sbjct: 213 DPHSQRSYLPPHIPDYHTRNYPSNAGPPG---PRFFFEQEIVFRMIILNEMVGSI--IGK 267
Query: 648 GGNSGGGMGGGLNAAA--LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP-------SQ 698
GG++ + A L +A S + + +N + + +D S+
Sbjct: 268 GGSTIRALQSETGACIKILEPVADSDERVVAI--TARENSDMLHSPAQDAVVRVYSRISE 325
Query: 699 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRT 756
+ + + + VP++ IG ++GKGG+ I E+RKI+GA IRI ++ ND
Sbjct: 326 ASIDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEM 385
Query: 757 ITMTGT 762
+ +TG+
Sbjct: 386 VQVTGS 391
>gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 760
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 32/310 (10%)
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
N IG +IGK G + +I + +G I IS + +N+RTIT+ G+ +A N
Sbjct: 348 NNYIGRLIGKQGRNLKKIEEETGTKITISSLQDLNIYNNERTITVKGSLEACC------N 401
Query: 330 MSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGA 389
VE+++ E+ +D ++ N S P LNA ++ALP L P A
Sbjct: 402 AEVEIMKK------LREAYENDVAAINQQTSLIPGLNLNALGIFSSALPVL------PSA 449
Query: 390 LNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGK 449
+++ +G G G S + GVP + Q + +
Sbjct: 450 AGPRSTMPPVGP----AGYNPFIGHSSHPSSLYGVPPASAIPHQHAAQEQEVAYLFIPTQ 505
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 506
VG++IGK G+ +K+L +G+ I I+ + P ER+V + G+ ++ F+A I
Sbjct: 506 AVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTPEAQFKAQGRI----- 560
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
F K + +++ E ++ + VP++ G +IGKGG + ++ + A V V D P
Sbjct: 561 -FGKLKEENIFTGKEEVRLETHIRVPSTAAGRVIGKGGKTVNELQSLTSAEVIVPRDQTP 619
Query: 567 NSTEREVNIK 576
+ + EV +K
Sbjct: 620 DE-KNEVVVK 628
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG++IGK G+ +K+L +G+ I I+ + P ER+V + G+ ++ F+A I
Sbjct: 507 VGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTPEAQFKAQGRI------ 560
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + +++ E ++ + VP++ G +IGKGG + ++ + A V V D P+
Sbjct: 561 FGKLKEENIFTGKEEVRLETHIRVPSTAAGRVIGKGGKTVNELQSLTSAEVIVPRDQTPD 620
Query: 123 STEREVNIK 131
+ EV +K
Sbjct: 621 E-KNEVVVK 628
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 32/248 (12%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAV 137
I L++I + G +IGK G +K I E +G + ++S D+ + ER + +KG +A
Sbjct: 340 IPLKIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQDLNIYNNERTITVKGSLEAC 399
Query: 138 TQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGL 197
A +I + ++ + Q + PGL N G+ +S + P + +
Sbjct: 400 CNAEVEIMKKLREAYENDVAAINQ---QTSLIPGLNLNALGIFSSALPVLPSAAGPRSTM 456
Query: 198 AALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQ 257
+G G + +G + ++L + + P Q Q
Sbjct: 457 PPVGPAGYNPF-IGHSSHPSSLYGVPPASAI----------------------PHQHAAQ 493
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
+Q + +P + +GA+IGK G I ++ +GA I+I+ + E+ D+ +R + +TGT
Sbjct: 494 EQE--VAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPA--EKPDATERMVIITGT 549
Query: 318 PDAIALAQ 325
P+A AQ
Sbjct: 550 PEAQFKAQ 557
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 32/248 (12%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAV 582
I L++I + G +IGK G +K I E +G + ++S D+ + ER + +KG +A
Sbjct: 340 IPLKIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQDLNIYNNERTITVKGSLEAC 399
Query: 583 TQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGL 642
A +I + ++ + Q + PGL N G+ +S + P + +
Sbjct: 400 CNAEVEIMKKLREAYENDVAAINQ---QTSLIPGLNLNALGIFSSALPVLPSAAGPRSTM 456
Query: 643 AALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQ 702
+G G + +G + ++L + + P Q Q
Sbjct: 457 PPVGPAGYNPF-IGHSSHPSSLYGVPPASAI----------------------PHQHAAQ 493
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
+Q + +P + +GA+IGK G I ++ +GA I+I+ + E+ D+ +R + +TGT
Sbjct: 494 EQE--VAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPA--EKPDATERMVIITGT 549
Query: 763 PDAIALAQ 770
P+A AQ
Sbjct: 550 PEAQFKAQ 557
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+G +IGK G +KK+ EE+G+KI IS + ER +TV GS+++ A I K +
Sbjct: 351 IGRLIGKQGRNLKKIEEETGTKITISSLQDLNIYNNERTITVKGSLEACCNAEVEIMKKL 410
Query: 61 EEFHKN 66
E ++N
Sbjct: 411 REAYEN 416
>gi|366993026|ref|XP_003676278.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
gi|342302144|emb|CCC69917.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
Length = 445
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 16/182 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R + KE ++G GE++ K+++++ ++I +S++ PERI+ V G+ D++ A+
Sbjct: 77 LRMLCSVKEASLVVGPKGESISKIKKDTSTRINVSENIRGVPERIIYVRGACDNVANAYL 136
Query: 500 LITKNI-----------EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
I K I EE K++ + +L+ + L++ G IIGK GS++K
Sbjct: 137 NIAKAIRKNEGIIFQGPEEDEKDREEGSQSKSSDELVTIHLLISHHLIGYIIGKHGSRLK 196
Query: 549 TIRETSGASVYVASDMLPNSTEREVNIKGVPDAV---TQAIYQICLIMVDSPPKGATIPY 605
I +TS +Y + D L +S +R + I G PDA+ T+ I Q L +S K I Y
Sbjct: 197 EIEQTSSCKLYASPDQLFSSNDRILTITGFPDAIQKATRCIGQTILDCHESTSKKRAIFY 256
Query: 606 RP 607
+P
Sbjct: 257 QP 258
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 16/175 (9%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNI- 60
KE ++G GE++ K+++++ ++I +S++ PERI+ V G+ D++ A+ I K I
Sbjct: 84 KEASLVVGPKGESISKIKKDTSTRINVSENIRGVPERIIYVRGACDNVANAYLNIAKAIR 143
Query: 61 ----------EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
EE K++ + +L+ + L++ G IIGK GS++K I +TS
Sbjct: 144 KNEGIIFQGPEEDEKDREEGSQSKSSDELVTIHLLISHHLIGYIIGKHGSRLKEIEQTSS 203
Query: 111 ASVYVASDMLPNSTEREVNIKGVPDAV---TQAIYQICLIMVDSPPKGATIPYRP 162
+Y + D L +S +R + I G PDA+ T+ I Q L +S K I Y+P
Sbjct: 204 CKLYASPDQLFSSNDRILTITGFPDAIQKATRCIGQTILDCHESTSKKRAIFYQP 258
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 49/277 (17%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + + + LIG +IGK G+++ EI + S ++ S ++ SNDR +T+TG PDAI
Sbjct: 173 VTIHLLISHHLIGYIIGKHGSRLKEIEQTSSC--KLYASPDQLFSSNDRILTITGFPDAI 230
Query: 322 ALAQYLI-------NMSVELLRANLNGEGGGESNMDDFSS-------------------- 354
A I + S RA G S + + SS
Sbjct: 231 QKATRCIGQTILDCHESTSKKRAIFYQPSIGYSALSNSSSYYGYNNQSQRFYQFNKYNSY 290
Query: 355 -DNNLPSSAPLAGL-NASNPLAAALPQLAQ-ILTKPGALNALTSLSALGGLSDLLGGGSS 411
P S P+ + P+ L Q + T NA TS + L ++ +
Sbjct: 291 RSRRAPRSPPVMMIPTPVQPIQVTNQTLKQPVYTAETVANA-TSFTPNFVLPNVRIVNTI 349
Query: 412 GGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGS 471
SGN+ + Q VQR + + + VG+IIG+ G + ++E +G
Sbjct: 350 ISQSGNN------------QDSQLMSVQREI--YINEEFVGNIIGREGRNINSIKETTGC 395
Query: 472 KIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 506
I+I D + ER + + G+ A LI+ IE
Sbjct: 396 SIFIDDPVEGSYERKLVIKGTQMGSQAAIMLISNKIE 432
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T + + + LIG +IGK G+++ EI + S ++ S ++ SNDR +T+TG PDAI
Sbjct: 173 VTIHLLISHHLIGYIIGKHGSRLKEIEQTSSC--KLYASPDQLFSSNDRILTITGFPDAI 230
Query: 767 ALAQYLINMSV 777
A I ++
Sbjct: 231 QKATRCIGQTI 241
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 72 GGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
G N +SQL +Q + + G+IIG+ G I +I+ET+G S+++ D + S ER++
Sbjct: 354 GNNQDSQLMSVQREIYINEEFVGNIIGREGRNINSIKETTGCSIFI-DDPVEGSYERKLV 412
Query: 130 IKG 132
IKG
Sbjct: 413 IKG 415
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 517 GGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
G N +SQL +Q + + G+IIG+ G I +I+ET+G S+++ D + S ER++
Sbjct: 354 GNNQDSQLMSVQREIYINEEFVGNIIGREGRNINSIKETTGCSIFI-DDPVEGSYERKLV 412
Query: 575 IKG 577
IKG
Sbjct: 413 IKG 415
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 234/567 (41%), Gaps = 89/567 (15%)
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
R N + +RN RD S K N ++ I VP VIGK G I +R S A
Sbjct: 118 RVHNAIVDTLHRNRRD--SDKKNTEEANIL----VPASQASNVIGKSGAVIKHLRSTSRA 171
Query: 294 MIRISKSSEEEED-----SNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESN 348
I++S + S D + +TG +A+ A L +S + + E++
Sbjct: 172 FIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKA--LFGVSTIIYKHPSKENIPLETS 229
Query: 349 MDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGG 408
+ + + +PS P+ ASN +A P A P SLS LG +
Sbjct: 230 IPEPTPSIIIPSELPV--YPASNFYSA--PDAAIPSVHP-------SLSILGSTHHVPEL 278
Query: 409 GSSGGGSGNSGGFGGV-PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLRE 467
G + + P P Y+ + +G + R + ++G +IG+ G T+K +R+
Sbjct: 279 ALPADDHGRLPIYPSILPVIPTYSAPKCSG-ELEFRVLCPSGKIGLVIGRGGATIKNIRQ 337
Query: 468 ESGSKIYISDS--STPERIVTVIGS--MDSL----FRAFSLITKNIEEFHKNQNKHLGGN 519
ESG++I + D+ E I+T+ + +D + A L+ I ++
Sbjct: 338 ESGARIDVDDAKNDREESIITITSTEAIDDVKSAAVEAVLLLQAKINDY----------- 386
Query: 520 GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP---NSTEREVNIK 576
E + LRL+VP G +IG+GGS + +R+ + A++ ++ P +S++ V +
Sbjct: 387 -EDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVS 445
Query: 577 GVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG--LIGNQFGMQNSLMGAPD- 633
G D + A+ QI L + + K + QN+ G + + S + P
Sbjct: 446 GEADKLRDALVQIILRLREDVLKESV-----ESQNSDRDGKLTVATSDSLYGSSLSLPAL 500
Query: 634 MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNR 693
+ +NP + G S + PR + + +
Sbjct: 501 LPHNPQIAPLSYDRRGESERALEV-------------------FPRTSSYGYSSMQVTD- 540
Query: 694 DG----PSQKTNQQQNQITK-EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSS 746
DG PS + + + + EMT+P + V+GK GT + IRKISGA I I SKSS
Sbjct: 541 DGYGGLPSYTSKAYEEHLPRDEMTIPASGLSKVMGKRGTNLDNIRKISGAHIEIIESKSS 600
Query: 747 EEEEDSNDRTITMTGTPDAIALAQYLI 773
+D ++GT + A+ LI
Sbjct: 601 R-----HDHIAYISGTSEQRQSAENLI 622
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 159/379 (41%), Gaps = 72/379 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTV-------------------IG 44
+GS+IGK+G + +R+++ +K+ + D +R++ V
Sbjct: 52 IGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRDLDAEVDDNEPVCA 111
Query: 45 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
+ D+L R + I ++ H+N+ N E + ++VPASQ ++IGK G+ IK
Sbjct: 112 AQDALLRVHNAI---VDTLHRNRRDSDKKNTE----EANILVPASQASNVIGKSGAVIKH 164
Query: 105 IRETSGASVYV-------ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP----- 152
+R TS A + V A+ S + V I G +AV +A++ + I+ P
Sbjct: 165 LRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPSKENI 224
Query: 153 PKGATIPYRPLPQNAGGPGLIGNQFGMQ--NSLMGAPDMGNNPLAGLAALGLGGNSGGGM 210
P +IP P P +I ++ + ++ APD AA+ S +
Sbjct: 225 PLETSIP-EPTPS-----IIIPSELPVYPASNFYSAPD---------AAIPSVHPSLSIL 269
Query: 211 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 270
G + LA A + P P+ + ++ + P+
Sbjct: 270 GSTHHVPELALPADDHGRLPIYPSILPV-----------IPTYSAPKCSGELEFRVLCPS 318
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 330
IG VIG+GG I IR+ SGA I + + + E+S IT+T T +AI +
Sbjct: 319 GKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREES---IITITST-EAIDDVKSAAVE 374
Query: 331 SVELLRANLNGEGGGESNM 349
+V LL+A +N N+
Sbjct: 375 AVLLLQAKINDYEDDRMNL 393
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 159/379 (41%), Gaps = 72/379 (18%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTV-------------------IG 489
+GS+IGK+G + +R+++ +K+ + D +R++ V
Sbjct: 52 IGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRDLDAEVDDNEPVCA 111
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+ D+L R + I ++ H+N+ N E + ++VPASQ ++IGK G+ IK
Sbjct: 112 AQDALLRVHNAI---VDTLHRNRRDSDKKNTE----EANILVPASQASNVIGKSGAVIKH 164
Query: 550 IRETSGASVYV-------ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP----- 597
+R TS A + V A+ S + V I G +AV +A++ + I+ P
Sbjct: 165 LRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPSKENI 224
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQ--NSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
P +IP P P +I ++ + ++ APD AA+ S +
Sbjct: 225 PLETSIP-EPTPS-----IIIPSELPVYPASNFYSAPD---------AAIPSVHPSLSIL 269
Query: 656 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
G + LA A + P P+ + ++ + P+
Sbjct: 270 GSTHHVPELALPADDHGRLPIYPSILPV-----------IPTYSAPKCSGELEFRVLCPS 318
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
IG VIG+GG I IR+ SGA I + + + E+S IT+T T +AI +
Sbjct: 319 GKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREES---IITITST-EAIDDVKSAAVE 374
Query: 776 SVELLRANLNGEGGGESNM 794
+V LL+A +N N+
Sbjct: 375 AVLLLQAKINDYEDDRMNL 393
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 150/345 (43%), Gaps = 63/345 (18%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGS--MDSL----FRAFSLI 56
++G +IG+ G T+K +R+ESG++I + D+ E I+T+ + +D + A L+
Sbjct: 320 KIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITSTEAIDDVKSAAVEAVLLL 379
Query: 57 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
I ++ E + LRL+VP G +IG+GGS + +R+ + A++ ++
Sbjct: 380 QAKINDY------------EDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILIS 427
Query: 117 SDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG-- 171
P +S++ V + G D + A+ QI L + + K + QN+ G
Sbjct: 428 KGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREDVLKESV-----ESQNSDRDGKL 482
Query: 172 LIGNQFGMQNSLMGAPD-MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ + S + P + +NP + G S +
Sbjct: 483 TVATSDSLYGSSLSLPALLPHNPQIAPLSYDRRGESERALEV------------------ 524
Query: 231 HMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITK-EMTVPNELIGAVIGKGGTKIF 285
PR + + + DG PS + + + + EMT+P + V+GK GT +
Sbjct: 525 -FPRTSSYGYSSMQVTD-DGYGGLPSYTSKAYEEHLPRDEMTIPASGLSKVMGKRGTNLD 582
Query: 286 EIRKISGAMIRI--SKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
IRKISGA I I SKSS +D ++GT + A+ LI
Sbjct: 583 NIRKISGAHIEIIESKSSR-----HDHIAYISGTSEQRQSAENLI 622
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 123/262 (46%), Gaps = 32/262 (12%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-EEEDSNDRTITM 314
+ + +++ + VPN++IG +IG+GG+ + ++RK + A I ISK + S+D + +
Sbjct: 385 DYEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEV 444
Query: 315 TGTPDAI--ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
+G D + AL Q ++ + ++L+ ++ ES D + +S L G + S P
Sbjct: 445 SGEADKLRDALVQIILRLREDVLKESV------ESQNSDRDGKLTVATSDSLYGSSLSLP 498
Query: 373 LAAALPQLAQILTKPGALNAL-TSLSALGGLSDLLGGGSSGGGSG---NSGGFGGVPQGP 428
A LP QI P + + S AL ++ SS G S G+GG+ P
Sbjct: 499 --ALLPHNPQI--APLSYDRRGESERAL----EVFPRTSSYGYSSMQVTDDGYGGL---P 547
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVT 486
+Y + R + + ++GK G + +R+ SG+ I I S SS + I
Sbjct: 548 SYTSKAYEEHLPRDEMTIPASGLSKVMGKRGTNLDNIRKISGAHIEIIESKSSRHDHIAY 607
Query: 487 VIG------SMDSLFRAFSLIT 502
+ G S ++L +AF + T
Sbjct: 608 ISGTSEQRQSAENLIKAFIMST 629
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-EEEDSNDRTITM 759
+ + +++ + VPN++IG +IG+GG+ + ++RK + A I ISK + S+D + +
Sbjct: 385 DYEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEV 444
Query: 760 TGTPDAI--ALAQYLINMSVELLRANLNGEGGGES-NMDDFSSDNNLPSSAPLAGLNASN 816
+G D + AL Q ++ + ++L+ ++ + + +SD+ SS L L N
Sbjct: 445 SGEADKLRDALVQIILRLREDVLKESVESQNSDRDGKLTVATSDSLYGSSLSLPALLPHN 504
Query: 817 PLAAAL 822
P A L
Sbjct: 505 PQIAPL 510
>gi|402221820|gb|EJU01888.1| hypothetical protein DACRYDRAFT_22325 [Dacryopinax sp. DJM-731 SS1]
Length = 355
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 96/173 (55%), Gaps = 7/173 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G V LRE +G K +S ER+++V G ++++ +A++
Sbjct: 30 LRALVSTKDAGIIIGKAGRNVADLRESTGVKAGVSKVVPGVHERVLSVTGPVEAVAKAYT 89
Query: 500 LITKNI----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
LI + Q ++ + LRL++ + G++IG+ G +IK+I++ SG
Sbjct: 90 LIASQLLSPPAPPSPPQTPPPSPPNQASTLTLRLLISHNLMGTLIGRSGLKIKSIQDASG 149
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 607
+ A +MLP STER V + G +++ +A+ ++ +V+ +G T+ Y P
Sbjct: 150 VRMVAAKEMLPQSTERVVEVIGDAESIGRAVEEVGRCLVEDWERGVGTVLYHP 202
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI- 60
K+ G IIGK+G V LRE +G K +S ER+++V G ++++ +A++LI +
Sbjct: 37 KDAGIIIGKAGRNVADLRESTGVKAGVSKVVPGVHERVLSVTGPVEAVAKAYTLIASQLL 96
Query: 61 ---EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
Q ++ + LRL++ + G++IG+ G +IK+I++ SG + A
Sbjct: 97 SPPAPPSPPQTPPPSPPNQASTLTLRLLISHNLMGTLIGRSGLKIKSIQDASGVRMVAAK 156
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
+MLP STER V + G +++ +A+ ++ +V+ +G T+ Y P
Sbjct: 157 EMLPQSTERVVEVIGDAESIGRAVEEVGRCLVEDWERGVGTVLYHP 202
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 161/360 (44%), Gaps = 73/360 (20%)
Query: 421 FGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS- 479
FGG+P Q+ +R ++Q VG+IIG+ G T++++ +++ +++ +
Sbjct: 276 FGGLPG-------QSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDN 328
Query: 480 --TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
+ E+ +T+ G+ ++ A I + +++ N NK GE I L+++ + G
Sbjct: 329 VGSLEKAITIYGNPENCTNACKRILEVMQQEANNTNK-----GE---ICLKILAHNNLIG 380
Query: 538 SIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
IIGKGG+ IK I + + + V+S D+ + ER + +KG D +++A QI +
Sbjct: 381 RIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGAIDNMSRAEAQISAKLRQ 440
Query: 596 SPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
S PQ PGL +P+A +A G+G S G
Sbjct: 441 SYENDLQA---MAPQTMMFPGL-------------------HPMAMMATAGIGYGSRGLY 478
Query: 656 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
G + ++Q G SQ+T + +PN
Sbjct: 479 TGQAPYPGMYPAGAAQ---------------------GGGDSQETTY--------LYIPN 509
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE--EEDSNDRTITMTGTPDAIALAQYLI 773
+GA+IG G+ I I + SGA ++I+ E +E N+R +T+ G+P+A AQYLI
Sbjct: 510 NAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLI 569
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 151/335 (45%), Gaps = 66/335 (19%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAFSLIT 57
+Q VG+IIG+ G T++++ +++ +++ + + E+ +T+ G+ ++ A I
Sbjct: 294 VQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPENCTNACKRIL 353
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
+ +++ N NK GE I L+++ + G IIGKGG+ IK I + + + V+S
Sbjct: 354 EVMQQEANNTNK-----GE---ICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSS 405
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG D +++A QI + S PQ PGL
Sbjct: 406 INDINSFNLERIITVKGAIDNMSRAEAQISAKLRQSYENDLQA---MAPQTMMFPGL--- 459
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+P+A +A G+G S G G + ++Q
Sbjct: 460 ----------------HPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQ--------- 494
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
G SQ+T + +PN +GA+IG G+ I I + SGA +
Sbjct: 495 ------------GGGDSQETTY--------LYIPNNAVGAIIGTKGSHIRNIIRFSGASV 534
Query: 296 RISKSSEE--EEDSNDRTITMTGTPDAIALAQYLI 328
+I+ E +E N+R +T+ G+P+A AQYLI
Sbjct: 535 KIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLI 569
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 154/350 (44%), Gaps = 61/350 (17%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
N + +I ++ N LIG +IGKGG I I + + I +S ++ + +R IT+
Sbjct: 362 NTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVK 421
Query: 316 GTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAA 375
G D ++ A+ I+ + S +N+L + AP
Sbjct: 422 GAIDNMSRAEAQISAKLRQ------------------SYENDLQAMAP------------ 451
Query: 376 ALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQT 435
Q + PG L+ + ++ G +G GS G +G + G P G Q
Sbjct: 452 ------QTMMFPG-LHPMAMMATAG-----IGYGSRGLYTGQAPYPGMYPAGA----AQG 495
Query: 436 TGVQRRMRHI-MQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTV 487
G + ++ + VG+IIG G ++ + SG+ + I+ D + P ER VT+
Sbjct: 496 GGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTI 555
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
+GS ++ ++A LI F K + + + + + ++VP+SQ G IIGKGG +
Sbjct: 556 VGSPEAQWKAQYLI------FEKMREEGFVAGSDDVRLTVEIMVPSSQVGRIIGKGGQNV 609
Query: 548 KTIRETSGASVYVASD-MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
+ ++ +G+ + + P E V+I G +V A +I +++ S
Sbjct: 610 RELQRVTGSVIKLPEQGASPQEDETTVHIIGPFFSVQSAQRRIRAMVLQS 659
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ D + P ER VT++GS ++ ++A LI
Sbjct: 512 VGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLI-- 569
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
F K + + + + + ++VP+SQ G IIGKGG ++ ++ +G+ + +
Sbjct: 570 ----FEKMREEGFVAGSDDVRLTVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQ 625
Query: 119 -MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
P E V+I G +V A +I +++ S
Sbjct: 626 GASPQEDETTVHIIGPFFSVQSAQRRIRAMVLQS 659
>gi|154794972|gb|ABS86520.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 259
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 36/269 (13%)
Query: 37 ERIVTVIGSMDSLFRAFSLITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 94
+R+++V G ++ + +A+S++ I + + +R++V + GSI
Sbjct: 11 DRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSI 70
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 152
IG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI++I CL M D
Sbjct: 71 IGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWE 129
Query: 153 PKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 211
T+ Y+P A GP G+ G + G G G SGG M
Sbjct: 130 RAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRAGSGVPSGGHMS 186
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------I 262
G + P +N N H+ N +G + N +
Sbjct: 187 GDV------------------PGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 228
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
T+ +++P +++G +IGKGG KI EIR++S
Sbjct: 229 TQNISIPADMVGCIIGKGGAKINEIRRMS 257
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 36/269 (13%)
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
+R+++V G ++ + +A+S++ I + + +R++V + GSI
Sbjct: 11 DRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSI 70
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 597
IG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI++I CL M D
Sbjct: 71 IGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWE 129
Query: 598 PKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
T+ Y+P A GP G+ G + G G G SGG M
Sbjct: 130 RAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRAGSGVPSGGHMS 186
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------I 707
G + P +N N H+ N +G + N +
Sbjct: 187 GDV------------------PGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 228
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
T+ +++P +++G +IGKGG KI EIR++S
Sbjct: 229 TQNISIPADMVGCIIGKGGAKINEIRRMS 257
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ V + L+G++IG+ G+KI EI+ SG +R+ S E S +R + + G+P+AI +A
Sbjct: 59 RVLVSHNLMGSIIGRQGSKIKEIQDTSG--VRMVASKEMLPQSTERVVEVQGSPEAIRVA 116
Query: 325 QYLI 328
+ I
Sbjct: 117 IHEI 120
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ V + L+G++IG+ G+KI EI+ SG +R+ S E S +R + + G+P+AI +A
Sbjct: 59 RVLVSHNLMGSIIGRQGSKIKEIQDTSG--VRMVASKEMLPQSTERVVEVQGSPEAIRVA 116
Query: 770 QYLI 773
+ I
Sbjct: 117 IHEI 120
>gi|313239457|emb|CBY14391.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVI 488
+Y++I T +R +M K+ IIG++ +K LRE++ I +S +R++T+
Sbjct: 2 DYSDIDLT-----LRFLMNQKQASQIIGRNASNIKNLREQTECNITLSSREHEKRLLTIA 56
Query: 489 GSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
+ S + E + +N G + + I L L++P + CG IIGKGG +K
Sbjct: 57 AKKSISMKTVS----RLGEILEAENNEYGKSTKLVPITLTLVIPKNICGMIIGKGGEALK 112
Query: 549 TIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV 594
+R SGA + +++D LP S ER I G +VTQAI + IM+
Sbjct: 113 DLRVKSGAQINMSADCLPKSDERTCQITGNNISVTQAIDLLIGIMI 158
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M K+ IIG++ +K LRE++ I +S +R++T+ + S +
Sbjct: 14 MNQKQASQIIGRNASNIKNLREQTECNITLSSREHEKRLLTIAAKKSISMKTVS----RL 69
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E + +N G + + I L L++P + CG IIGKGG +K +R SGA + +++D L
Sbjct: 70 GEILEAENNEYGKSTKLVPITLTLVIPKNICGMIIGKGGEALKDLRVKSGAQINMSADCL 129
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMV 149
P S ER I G +VTQAI + IM+
Sbjct: 130 PKSDERTCQITGNNISVTQAIDLLIGIMI 158
>gi|359324036|ref|XP_003640271.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Canis lupus familiaris]
Length = 464
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K L + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALHTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ T+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHPTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K L + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALHTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ T+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHPTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+ +L G++IGKGG +I ++R SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKI---DEPLEGSEDRVITITGTQDQI 444
Query: 322 ALAQYLINMSVELLRANLNG 341
A YL+ SV+ AN+ G
Sbjct: 445 QNAPYLLQNSVKQY-ANVEG 463
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+ +L G++IGKGG +I ++R SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKI---DEPLEGSEDRVITITGTQDQI 444
Query: 767 ALAQYLINMSVELLRANLNG 786
A YL+ SV+ AN+ G
Sbjct: 445 QNAPYLLQNSVKQY-ANVEG 463
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ + GSIIGKGG +IK +R SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKI-DEPLEGSEDRVITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAPY 449
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ + GSIIGKGG +IK +R SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKI-DEPLEGSEDRVITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAPY 449
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 410 SSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREES 469
S GG G+ G GG I TT V + GSIIGK G +K++R ES
Sbjct: 372 SYAGGRGSYGDLGG--------PIITTQV------TISKDLAGSIIGKGGRRIKQVRHES 417
Query: 470 GSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
G+ I I + + +R++T+ G+ D + A L+ +++++
Sbjct: 418 GASIKIDEPLEGSEDRVITITGTQDQIQNAPYLLQNSVKQY 458
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G +K++R ESG+ I I + + +R++T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGRRIKQVRHESGASIKIDEPLEGSEDRVITITGTQDQIQNAPYLLQNSVKQY 458
>gi|344255425|gb|EGW11529.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 176
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 24/148 (16%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSII K GE++KK+REESG++ IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIAKKGESLKKMREESGARTNISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKN---------------------IEEF---HKNQNKHLGGNGESQLIQLRLIVPA 533
F++I ++ F H N G + +Q L +P
Sbjct: 72 FAMIIDKLDISSSITNAQLPVDLPSPYGLDSFPMTHGNTGFSAGLDASAQTTSHELTIPN 131
Query: 534 SQCGSIIGKGGSQIKTIRETSGASVYVA 561
G IIG G++I I + SG + +A
Sbjct: 132 DLIGCIIGSQGAKINEICQMSGTQIKIA 159
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 24/140 (17%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKN- 59
M GKEVGSII K GE++KK+REESG++ IS+ + PERI+T+ G +++F+AF++I
Sbjct: 20 MHGKEVGSIIAKKGESLKKMREESGARTNISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 60 --------------------IEEF---HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIG 96
++ F H N G + +Q L +P G IIG
Sbjct: 80 DISSSITNAQLPVDLPSPYGLDSFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIG 139
Query: 97 KGGSQIKTIRETSGASVYVA 116
G++I I + SG + +A
Sbjct: 140 SQGAKINEICQMSGTQIKIA 159
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 73/223 (32%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSII K G +K +RE SGA ++ P ER + + G T
Sbjct: 14 LTIRLLMHGKEVGSIIAKKGESLKKMREESGARTNISEGNCP---ERIITLAGP----TN 66
Query: 140 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 199
AI++ +++D ++I LP + P +G+ + M
Sbjct: 67 AIFKAFAMIIDKLDISSSITNAQLPVDLPSP------YGLDSFPMTH------------- 107
Query: 200 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ 259
GN+G GL+A+A Q T+
Sbjct: 108 ----GNTG--FSAGLDASA----------------------------------QTTSH-- 125
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 302
E+T+PN+LIG +IG G KI EI ++SG I+I+ E
Sbjct: 126 -----ELTIPNDLIGCIIGSQGAKINEICQMSGTQIKIANPVE 163
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 73/223 (32%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ +RL++ + GSII K G +K +RE SGA ++ P ER + + G T
Sbjct: 14 LTIRLLMHGKEVGSIIAKKGESLKKMREESGARTNISEGNCP---ERIITLAGP----TN 66
Query: 585 AIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAA 644
AI++ +++D ++I LP + P +G+ + M
Sbjct: 67 AIFKAFAMIIDKLDISSSITNAQLPVDLPSP------YGLDSFPMTH------------- 107
Query: 645 LGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ 704
GN+G GL+A+A Q T+
Sbjct: 108 ----GNTG--FSAGLDASA----------------------------------QTTSH-- 125
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 747
E+T+PN+LIG +IG G KI EI ++SG I+I+ E
Sbjct: 126 -----ELTIPNDLIGCIIGSQGAKINEICQMSGTQIKIANPVE 163
>gi|45552765|ref|NP_995907.1| bancal, isoform A [Drosophila melanogaster]
gi|442624312|ref|NP_001261102.1| bancal, isoform F [Drosophila melanogaster]
gi|21626883|gb|AAF57450.2| bancal, isoform A [Drosophila melanogaster]
gi|189182182|gb|ACD81867.1| LP16172p [Drosophila melanogaster]
gi|440214543|gb|AGB93634.1| bancal, isoform F [Drosophila melanogaster]
Length = 496
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 422 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 478
Query: 323 LAQYLINMSVE 333
+AQYL+ SV
Sbjct: 479 MAQYLLQQSVH 489
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 422 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 478
Query: 768 LAQYLINMSVE 778
+AQYL+ SV
Sbjct: 479 MAQYLLQQSVH 489
>gi|45552763|ref|NP_995906.1| bancal, isoform C [Drosophila melanogaster]
gi|45445681|gb|AAM68389.2| bancal, isoform C [Drosophila melanogaster]
gi|261338783|gb|ACX70073.1| RE05515p [Drosophila melanogaster]
Length = 502
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 41 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 100
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 101 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 147
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 148 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 185
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 41 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 100
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 101 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 147
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 148 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 185
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 428 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 484
Query: 323 LAQYLINMSVE 333
+AQYL+ SV
Sbjct: 485 MAQYLLQQSVH 495
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 428 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 484
Query: 768 LAQYLINMSVE 778
+AQYL+ SV
Sbjct: 485 MAQYLLQQSVH 495
>gi|359324034|ref|XP_003640270.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Canis lupus familiaris]
Length = 466
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K L + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALHTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ T+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHPTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K L + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALHTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ T+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHPTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+ +L G++IGKGG +I ++R SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKI---DEPLEGSEDRVITITGTQDQI 444
Query: 322 ALAQYLINMSVELLR 336
A YL+ SV+ ++
Sbjct: 445 QNAPYLLQNSVKHVK 459
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+ +L G++IGKGG +I ++R SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKI---DEPLEGSEDRVITITGTQDQI 444
Query: 767 ALAQYLINMSVELLR 781
A YL+ SV+ ++
Sbjct: 445 QNAPYLLQNSVKHVK 459
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ + GSIIGKGG +IK +R SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKI-DEPLEGSEDRVITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAPY 449
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ + GSIIGKGG +IK +R SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKI-DEPLEGSEDRVITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAPY 449
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 410 SSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREES 469
S GG G+ G GG I TT V + GSIIGK G +K++R ES
Sbjct: 372 SYAGGRGSYGDLGG--------PIITTQV------TISKDLAGSIIGKGGRRIKQVRHES 417
Query: 470 GSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHL 516
G+ I I + + +R++T+ G+ D + A L+ +++ + K
Sbjct: 418 GASIKIDEPLEGSEDRVITITGTQDQIQNAPYLLQNSVKHVKQYSGKFF 466
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEFH 64
GSIIGK G +K++R ESG+ I I + + +R++T+ G+ D + A L+ +++
Sbjct: 400 GSIIGKGGRRIKQVRHESGASIKIDEPLEGSEDRVITITGTQDQIQNAPYLLQNSVKHVK 459
Query: 65 KNQNKHL 71
+ K
Sbjct: 460 QYSGKFF 466
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 129/552 (23%), Positives = 232/552 (42%), Gaps = 91/552 (16%)
Query: 250 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN- 308
G S+K + +++ ++ VP+ +IGK G I ++R + A I+++ + +
Sbjct: 130 GDSEKKRKDRDEC--QILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDAADPTHSC 187
Query: 309 ----DRTITMTGTPDAIALAQYLINMSVELL--RANLNGEGGGESNMDDFSSDNNLPSSA 362
D + +TG +A+ A + ++ + R +++ + +++P
Sbjct: 188 AMEFDNFVVITGESEAVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSIIIPSDVPVYP 247
Query: 363 PLAGLNASNPLAA--ALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGG 420
P AS+P+ A+PQ+ GA T++ L G +D +GNS
Sbjct: 248 PGGLYPASDPIVTPRAVPQII------GA----TNVPDLQGYAD----------AGNSW- 286
Query: 421 FGGVPQGPNYAN----IQTTGVQRR----MRHIMQGKEVGSIIGKSGETVKKLREESGSK 472
P Y++ + G R +R + ++G +IGK G T+K +R+ SG+
Sbjct: 287 -------PMYSSALPVVSGVGASRSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAH 339
Query: 473 IYISDS-STPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIV 531
I + DS + + + +I + +S S+ + + N + + + +RL+V
Sbjct: 340 IEVDDSKANFDECLIIITTTESPSDLKSMAVEAVLLMQGKIN-----DEDDTTVSIRLLV 394
Query: 532 PASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQ 588
P+ G IIGK GS I IR+ + A V ++ P ++ + V + G D V A+ Q
Sbjct: 395 PSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVGGSVDCVRDALIQ 454
Query: 589 ICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNN--PLAGLAALG 646
I L + D + + P + G L G+ P M ++ P+A
Sbjct: 455 IILRLRDDVLRERDTGHNP---SIGAESLYPGSAGLS-----LPSMMHSVPPVAAPMVYD 506
Query: 647 LGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNR-----DGPSQKTN 701
SG G+G + + +S +P N + + + PS
Sbjct: 507 HRAESGAGLG-------MLSPSSPYGGYGSLPMGDNGYGSMSSYATKLYGGLPPPS---- 555
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
T +M +P +G V+GKGG I IRKISGA I I S+ + DR ++G
Sbjct: 556 ------TLDMLIPANAVGKVLGKGGANIANIRKISGASIEI---SDNKSARGDRIALISG 606
Query: 762 TPDAIALAQYLI 773
TP+ A+ LI
Sbjct: 607 TPEQKRAAENLI 618
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 44/335 (13%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS-STPERIVTVIGSMDSLFRAFSLITKNIEEF 63
++G +IGK G T+K +R+ SG+ I + DS + + + +I + +S S+ + +
Sbjct: 317 KIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSDLKSMAVEAVLLM 376
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP-- 121
N + + + +RL+VP+ G IIGK GS I IR+ + A V ++ P
Sbjct: 377 QGKIN-----DEDDTTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKC 431
Query: 122 -NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
++ + V + G D V A+ QI L + D + + P + G L G+
Sbjct: 432 ADANDELVEVGGSVDCVRDALIQIILRLRDDVLRERDTGHNP---SIGAESLYPGSAGLS 488
Query: 181 NSLMGAPDMGNN--PLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
P M ++ P+A SG G+G + + +S +P N
Sbjct: 489 -----LPSMMHSVPPVAAPMVYDHRAESGAGLG-------MLSPSSPYGGYGSLPMGDNG 536
Query: 239 NQNQHNRNNR-----DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
+ + + PS T +M +P +G V+GKGG I IRKISGA
Sbjct: 537 YGSMSSYATKLYGGLPPPS----------TLDMLIPANAVGKVLGKGGANIANIRKISGA 586
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
I I S+ + DR ++GTP+ A+ LI
Sbjct: 587 SIEI---SDNKSARGDRIALISGTPEQKRAAENLI 618
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 37/264 (14%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDSNDRTITM 314
++ ++ + VP+++IG +IGK G+ I EIRK + A +RISK + + D+ND + +
Sbjct: 382 DEDDTTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 441
Query: 315 TGTPDAI--ALAQYLINMSVELLRANLNGEGG--GESNMDDFSSDNNLPSSAPLAGLNAS 370
G+ D + AL Q ++ + ++LR G G ++ S+ +LPS +++
Sbjct: 442 GGSVDCVRDALIQIILRLRDDVLRERDTGHNPSIGAESLYPGSAGLSLPSM-----MHSV 496
Query: 371 NPLAAALPQLAQILTKPGA-LNALTSLSALGGLSDLLGGGSSGGGSGNSGG---FGGVPQ 426
P+AA P + + GA L L+ S GG L G +G GS +S +GG+P
Sbjct: 497 PPVAA--PMVYDHRAESGAGLGMLSPSSPYGGYGS-LPMGDNGYGSMSSYATKLYGGLPP 553
Query: 427 GPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERI 484
P+ ++ ++ VG ++GK G + +R+ SG+ I ISD S+ +RI
Sbjct: 554 -PSTLDM-----------LIPANAVGKVLGKGGANIANIRKISGASIEISDNKSARGDRI 601
Query: 485 VTVIGS------MDSLFRAFSLIT 502
+ G+ ++L +AF + T
Sbjct: 602 ALISGTPEQKRAAENLIQAFIMAT 625
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 37/188 (19%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTV------------- 487
R + + +GS+IGK+G+ + +R+E+ +K+ + D + +R++T+
Sbjct: 40 RILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVEID 99
Query: 488 ---------IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGS 538
+ D+L + I +I ++ K + + +++VP+SQ +
Sbjct: 100 DEFAGKEPLCAAQDALLKVHVAIANSIAAIGDSEKKRKDRD------ECQILVPSSQSAN 153
Query: 539 IIGKGGSQIKTIRETSGASVYVASDMLPNST-------EREVNIKGVPDAVTQAIYQICL 591
IIGK G+ IK +R + A++ V + + T + V I G +AV +A++ +
Sbjct: 154 IIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGESEAVKRALFAVSS 213
Query: 592 IMVDSPPK 599
IM P+
Sbjct: 214 IMYKFGPR 221
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 37/180 (20%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTV--------------------- 42
+GS+IGK+G+ + +R+E+ +K+ + D + +R++T+
Sbjct: 48 IGSVIGKNGKVINSIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVEIDDEFAGKEP 107
Query: 43 -IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
+ D+L + I +I ++ K + + +++VP+SQ +IIGK G+
Sbjct: 108 LCAAQDALLKVHVAIANSIAAIGDSEKKRKDRD------ECQILVPSSQSANIIGKAGAT 161
Query: 102 IKTIRETSGASVYVASDMLPNST-------EREVNIKGVPDAVTQAIYQICLIMVDSPPK 154
IK +R + A++ V + + T + V I G +AV +A++ + IM P+
Sbjct: 162 IKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGESEAVKRALFAVSSIMYKFGPR 221
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDSNDRTITM 759
++ ++ + VP+++IG +IGK G+ I EIRK + A +RISK + + D+ND + +
Sbjct: 382 DEDDTTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEV 441
Query: 760 TGTPDAI--ALAQYLINMSVELLRANLNGE 787
G+ D + AL Q ++ + ++LR G
Sbjct: 442 GGSVDCVRDALIQIILRLRDDVLRERDTGH 471
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 73 GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
G S+ + +R++ P+ + G +IGKGGS IK++R+ SGA + V
Sbjct: 300 GASRSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEV 342
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 64 HKNQNKHL---GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
K+Q + + G +LI R++ P GS+IGK G I +IR+ + A V V D
Sbjct: 18 RKHQKRRMTDRDDRGNDELIVYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVV-DPF 76
Query: 121 PNSTEREVNI 130
P S +R + I
Sbjct: 77 PGSKDRVITI 86
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 509 HKNQNKHL---GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 565
K+Q + + G +LI R++ P GS+IGK G I +IR+ + A V V D
Sbjct: 18 RKHQKRRMTDRDDRGNDELIVYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVV-DPF 76
Query: 566 PNSTEREVNI 575
P S +R + I
Sbjct: 77 PGSKDRVITI 86
>gi|154794957|gb|ABS86514.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 255
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 36/271 (13%)
Query: 37 ERIVTVIGSMDSLFRAFSLITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 94
+R+++V G ++ + +A+S++ I + + +R++V + GSI
Sbjct: 6 DRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSI 65
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 152
IG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI++I CL M D
Sbjct: 66 IGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWE 124
Query: 153 PKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 211
T+ Y+P A GP G+ G + G G G SGG M
Sbjct: 125 RAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRAGSGVPSGGHMS 181
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------I 262
G + P +N N H+ N +G + N +
Sbjct: 182 GDV------------------PGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 223
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
T+ +++P +++G +IGKGG I EIR++SG+
Sbjct: 224 TQNISIPADMVGCIIGKGGAXINEIRRMSGS 254
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 36/271 (13%)
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEE--FHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
+R+++V G ++ + +A+S++ I + + +R++V + GSI
Sbjct: 6 DRVLSVSGGLEGVSKAYSIVADAILQNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSI 65
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 597
IG+ GS+IK I++TSG + + +MLP STER V ++G P+A+ AI++I CL M D
Sbjct: 66 IGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAIHEIGKCL-MEDWE 124
Query: 598 PKGATIPYRPLPQNAGGP-GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 656
T+ Y+P A GP G+ G + G G G SGG M
Sbjct: 125 RAHGTVLYQP---GALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRAGSGVPSGGHMS 181
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ---------I 707
G + P +N N H+ N +G + N +
Sbjct: 182 GDV------------------PGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 223
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGA 738
T+ +++P +++G +IGKGG I EIR++SG+
Sbjct: 224 TQNISIPADMVGCIIGKGGAXINEIRRMSGS 254
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ V + L+G++IG+ G+KI EI+ SG +R+ S E S +R + + G+P+AI +A
Sbjct: 54 RVLVSHNLMGSIIGRQGSKIKEIQDTSG--VRMVASKEMLPQSTERVVEVQGSPEAIRVA 111
Query: 325 QYLI 328
+ I
Sbjct: 112 IHEI 115
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ V + L+G++IG+ G+KI EI+ SG +R+ S E S +R + + G+P+AI +A
Sbjct: 54 RVLVSHNLMGSIIGRQGSKIKEIQDTSG--VRMVASKEMLPQSTERVVEVQGSPEAIRVA 111
Query: 770 QYLI 773
+ I
Sbjct: 112 IHEI 115
>gi|198430105|ref|XP_002128022.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K,
like [Ciona intestinalis]
Length = 323
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Query: 422 GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP 481
GG P+ T +Q MR ++ K G IIGK G +K +R+ ++I I DS +
Sbjct: 42 GGDEYSPSKRARHQTHIQ--MRCLVPAKCAGGIIGKGGTNIKDMRDTFKAQINIPDSDSR 99
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
ER++ + S++S I E N G + + + ++L+V SQ G IIG
Sbjct: 100 ERVLRISASIESCGEILLRTLPVINEAALNGPGRFGRDPKDDM-SIKLLVHQSQAGGIIG 158
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G +IK +RE +GA++ V D PNST+R + G + ++ + I ++ PPKG
Sbjct: 159 VKGFKIKELREKTGATIKVQQDCCPNSTDRVCMVAGSAEIISSCVVLILELLETIPPKGP 218
Query: 602 TIPYRP 607
+ P
Sbjct: 219 IQNFNP 224
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
K G IIGK G +K +R+ ++I I DS + ER++ + S++S I E
Sbjct: 66 AKCAGGIIGKGGTNIKDMRDTFKAQINIPDSDSRERVLRISASIESCGEILLRTLPVINE 125
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
N G + + + ++L+V SQ G IIG G +IK +RE +GA++ V D PN
Sbjct: 126 AALNGPGRFGRDPKDDM-SIKLLVHQSQAGGIIGVKGFKIKELREKTGATIKVQQDCCPN 184
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
ST+R + G + ++ + I ++ PPKG + P
Sbjct: 185 STDRVCMVAGSAEIISSCVVLILELLETIPPKGPIQNFNP 224
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTERE 127
IQ+R +VPA G IIGKGG+ IK +R+T A + + P+S RE
Sbjct: 58 IQMRCLVPAKCAGGIIGKGGTNIKDMRDTFKAQINI-----PDSDSRE 100
>gi|281363839|ref|NP_001163216.1| bancal, isoform E [Drosophila melanogaster]
gi|272432584|gb|ACZ94488.1| bancal, isoform E [Drosophila melanogaster]
Length = 493
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ G++IGK G+ ++K+R + + + + DS PER + + ++S + +
Sbjct: 25 VRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEM 84
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 560
K EE ++ +RL++ S G +IGKGG +IK IR+ G + V
Sbjct: 85 LKYFEERDED-------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKV 131
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
S++ P ST+R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 132 FSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 422 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 478
Query: 323 LAQYLI 328
+AQYL+
Sbjct: 479 MAQYLL 484
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 422 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 478
Query: 768 LAQYLI 773
+AQYL+
Sbjct: 479 MAQYLL 484
>gi|195585141|ref|XP_002082349.1| GD11524 [Drosophila simulans]
gi|194194358|gb|EDX07934.1| GD11524 [Drosophila simulans]
Length = 496
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 422 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 478
Query: 323 LAQYLINMSVE 333
+AQYL+ SV
Sbjct: 479 MAQYLLQQSVH 489
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 422 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 478
Query: 768 LAQYLINMSVE 778
+AQYL+ SV
Sbjct: 479 MAQYLLQQSVH 489
>gi|195430448|ref|XP_002063267.1| GK21481 [Drosophila willistoni]
gi|194159352|gb|EDW74253.1| GK21481 [Drosophila willistoni]
Length = 505
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 34 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 93
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 94 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 140
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 141 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 178
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 34 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 93
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 94 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 140
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 141 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 178
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I +A
Sbjct: 433 QVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQMA 489
Query: 325 QYLINMSVE 333
QYL+ SV
Sbjct: 490 QYLLQQSVH 498
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I +A
Sbjct: 433 QVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQMA 489
Query: 770 QYLINMSVE 778
QYL+ SV
Sbjct: 490 QYLLQQSVH 498
>gi|444517457|gb|ELV11574.1| Heterogeneous nuclear ribonucleoprotein K [Tupaia chinensis]
Length = 392
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK GE +K LR + + + + DSS P RI+++ +++ I
Sbjct: 4 LRILLQSKNAGAVIGKGGENIKALRTDYKASVSVPDSSGPGRILSISADTETIGGILKKI 63
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ + L +LRL++ S G IIG G++IK + E + ++ +
Sbjct: 64 IPTLEEYQHYKGSDLD-------CELRLLIHQSLAGGIIGVKGAKIKELGENTRTTIKLF 116
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ T R V I G PD V + I I ++ +SP KG P P
Sbjct: 117 QERCPHPTNRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPCDP 162
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK GE +K LR + + + + DSS P RI+++ +++ I +
Sbjct: 8 LQSKNAGAVIGKGGENIKALRTDYKASVSVPDSSGPGRILSISADTETIGGILKKIIPTL 67
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ + L +LRL++ S G IIG G++IK + E + ++ + +
Sbjct: 68 EEYQHYKGSDLD-------CELRLLIHQSLAGGIIGVKGAKIKELGENTRTTIKLFQERC 120
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ T R V I G PD V + I I ++ +SP KG P P
Sbjct: 121 PHPTNRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPCDP 162
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P + G++IGKGG +I +IR SGA I+I E E S DR IT+TGT +
Sbjct: 317 ITTQVTIPKDFAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQGQV 373
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 374 QNAQYLLQNSVK 385
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P + G++IGKGG +I +IR SGA I+I E E S DR IT+TGT +
Sbjct: 317 ITTQVTIPKDFAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQGQV 373
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 374 QNAQYLLQNSVK 385
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G V
Sbjct: 316 IITTQVTIPKDFAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQGQVQ 374
Query: 139 QAIY 142
A Y
Sbjct: 375 NAQY 378
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G V
Sbjct: 316 IITTQVTIPKDFAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQGQVQ 374
Query: 584 QAIY 587
A Y
Sbjct: 375 NAQY 378
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ + A L+ +++++
Sbjct: 329 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQGQVQNAQYLLQNSVKQY 387
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ + A L+ +++++
Sbjct: 329 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQGQVQNAQYLLQNSVKQY 387
>gi|324500292|gb|ADY40143.1| Far upstream element-binding protein 1 [Ascaris suum]
gi|324519726|gb|ADY47462.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 363
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 13/148 (8%)
Query: 9 IIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
IIGK GET+K+L ESG+KI D +TP+R + G+ + + +A I++ +
Sbjct: 2 IIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELV----- 56
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
NK G+G + VPA++ G +IGKGG IK I SGA V ++ D PNS+E
Sbjct: 57 --NKSGAGSGAEIFY---MHVPANKTGLVIGKGGETIKQICAESGAHVELSRDPPPNSSE 111
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPP 153
+ IKG P + A + I + + D P
Sbjct: 112 KVFIIKGTPYQIHHAQHIIRIKVGDISP 139
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 13/148 (8%)
Query: 454 IIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHK 510
IIGK GET+K+L ESG+KI D +TP+R + G+ + + +A I++ +
Sbjct: 2 IIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELV----- 56
Query: 511 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 570
NK G+G + VPA++ G +IGKGG IK I SGA V ++ D PNS+E
Sbjct: 57 --NKSGAGSGAEIFY---MHVPANKTGLVIGKGGETIKQICAESGAHVELSRDPPPNSSE 111
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPP 598
+ IKG P + A + I + + D P
Sbjct: 112 KVFIIKGTPYQIHHAQHIIRIKVGDISP 139
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
M VP G VIGKGG I +I SGA + +S+ + +S+++ + GTP I AQ
Sbjct: 70 MHVPANKTGLVIGKGGETIKQICAESGAHVELSR--DPPPNSSEKVFIIKGTPYQIHHAQ 127
Query: 326 YLINMSV 332
++I + V
Sbjct: 128 HIIRIKV 134
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
M VP G VIGKGG I +I SGA + +S+ + +S+++ + GTP I AQ
Sbjct: 70 MHVPANKTGLVIGKGGETIKQICAESGAHVELSR--DPPPNSSEKVFIIKGTPYQIHHAQ 127
Query: 771 YLINMSV 777
++I + V
Sbjct: 128 HIIRIKV 134
>gi|324518607|gb|ADY47153.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 384
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK GET+K+L ESG+KI D +TP+R + G+ + + +A I++ +
Sbjct: 20 VGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELV-- 77
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
NK G+G + VPA++ G +IGKGG IK I SGA V ++ + PN
Sbjct: 78 -----NKSGAGSGAEIFY---MHVPANKTGLVIGKGGETIKQICAESGAHVELSREPPPN 129
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
S E+ IKG P + A + I + + D P
Sbjct: 130 SYEKVFIIKGTPYQIHHAQHIIRIKVGDISP 160
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK GET+K+L ESG+KI D +TP+R + G+ + + +A I++ +
Sbjct: 20 VGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELV-- 77
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
NK G+G + VPA++ G +IGKGG IK I SGA V ++ + PN
Sbjct: 78 -----NKSGAGSGAEIFY---MHVPANKTGLVIGKGGETIKQICAESGAHVELSREPPPN 129
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
S E+ IKG P + A + I + + D P
Sbjct: 130 SYEKVFIIKGTPYQIHHAQHIIRIKVGDISP 160
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
M VP G VIGKGG I +I SGA + +S+ E +S ++ + GTP I AQ
Sbjct: 91 MHVPANKTGLVIGKGGETIKQICAESGAHVELSR--EPPPNSYEKVFIIKGTPYQIHHAQ 148
Query: 326 YLINMSV 332
++I + V
Sbjct: 149 HIIRIKV 155
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
M VP G VIGKGG I +I SGA + +S+ E +S ++ + GTP I AQ
Sbjct: 91 MHVPANKTGLVIGKGGETIKQICAESGAHVELSR--EPPPNSYEKVFIIKGTPYQIHHAQ 148
Query: 771 YLINMSV 777
++I + V
Sbjct: 149 HIIRIKV 155
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP +G +IGKGG I + SGA I+ +E++ + DR + GT + IA A
Sbjct: 12 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 69
Query: 325 QYLINMSVELLRANLNGEGGG 345
I+ EL+ N +G G G
Sbjct: 70 TQFIS---ELV--NKSGAGSG 85
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP +G +IGKGG I + SGA I+ +E++ + DR + GT + IA A
Sbjct: 12 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 69
Query: 770 QYLINMSVELLRANLNGEGGG 790
I+ EL+ N +G G G
Sbjct: 70 TQFIS---ELV--NKSGAGSG 85
Score = 39.7 bits (91), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+IVP + G IIGKGG IK + SGA + D + +R I+G + + +A
Sbjct: 12 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQ 71
Query: 143 QIC-LIMVDSPPKGATIPYRPLPQNAGG 169
I L+ GA I Y +P N G
Sbjct: 72 FISELVNKSGAGSGAEIFYMHVPANKTG 99
Score = 39.7 bits (91), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+IVP + G IIGKGG IK + SGA + D + +R I+G + + +A
Sbjct: 12 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQ 71
Query: 588 QIC-LIMVDSPPKGATIPYRPLPQNAGG 614
I L+ GA I Y +P N G
Sbjct: 72 FISELVNKSGAGSGAEIFYMHVPANKTG 99
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 43/242 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGS--------- 490
R++ +++GSIIGK GE K+LR +S S I IS++ ERIVT+ S
Sbjct: 44 YRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEETNLFGE 103
Query: 491 --------MDSLFRAFS-LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
D+LF +I +++ + + GE Q + +R++VPA Q G +IG
Sbjct: 104 TGEYVCPAQDALFMVHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIGCVIG 163
Query: 542 KGGSQIKTIRETSGASVYVA-SDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSP 597
KGG I+ IR + A + + D LP S + + I G P AV +A+YQ+ + ++P
Sbjct: 164 KGGQVIQNIRSETCAQIRITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATRLHENP 223
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
+ + GG + N AG LGL GN GG
Sbjct: 224 SRSQHLILSSSANVHGGVFVTAN-------------------AGAPVLGLYGNYKGGWSS 264
Query: 658 GL 659
Sbjct: 265 SF 266
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 43/235 (18%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGS---------------- 45
+++GSIIGK GE K+LR +S S I IS++ ERIVT+ S
Sbjct: 51 RKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEETNLFGETGEYVCP 110
Query: 46 -MDSLFRAFS-LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 103
D+LF +I +++ + + GE Q + +R++VPA Q G +IGKGG I+
Sbjct: 111 AQDALFMVHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIGCVIGKGGQVIQ 170
Query: 104 TIRETSGASVYVA-SDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 159
IR + A + + D LP S + + I G P AV +A+YQ+ + ++P + +
Sbjct: 171 NIRSETCAQIRITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATRLHENPSRSQHLI 230
Query: 160 YRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 214
GG + N AG LGL GN GG
Sbjct: 231 LSSSANVHGGVFVTAN-------------------AGAPVLGLYGNYKGGWSSSF 266
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE--EEEDSNDRTITMTGTP 318
Q+T M VP + IG VIGKGG I IR + A IRI+K S D + + G P
Sbjct: 146 QVTVRMLVPADQIGCVIGKGGQVIQNIRSETCAQIRITKDDHLPPLALSIDELLLIHGEP 205
Query: 319 DAIALAQYLI 328
A+ A Y +
Sbjct: 206 SAVRKALYQV 215
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE--EEEDSNDRTITMTGTP 763
Q+T M VP + IG VIGKGG I IR + A IRI+K S D + + G P
Sbjct: 146 QVTVRMLVPADQIGCVIGKGGQVIQNIRSETCAQIRITKDDHLPPLALSIDELLLIHGEP 205
Query: 764 DAIALAQYLI 773
A+ A Y +
Sbjct: 206 SAVRKALYQV 215
>gi|6006748|gb|AAF00596.1|AF142631_1 hnRNP K protein homolog [Drosophila melanogaster]
Length = 490
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 419 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 475
Query: 323 LAQYLI 328
+AQYL+
Sbjct: 476 MAQYLL 481
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 419 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 475
Query: 768 LAQYLI 773
+AQYL+
Sbjct: 476 MAQYLL 481
>gi|8699624|gb|AAF78762.1|AF275629_1 bancal protein [Drosophila melanogaster]
Length = 508
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 422 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 478
Query: 323 LAQYLINMSVE 333
+AQYL+ SV
Sbjct: 479 MAQYLLQQSVH 489
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 422 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 478
Query: 768 LAQYLINMSVE 778
+AQYL+ SV
Sbjct: 479 MAQYLLQQSVH 489
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 157/366 (42%), Gaps = 66/366 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVT----------VIG 489
R ++ ++VG++IG+ GE +K++ +ES ++I I D PER V V
Sbjct: 122 FRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDALVPP 181
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
++D L R + IT ++ K G S RL+VPASQ GS+IGK G+ IK+
Sbjct: 182 AIDVLLRVHNRITDGLDSETDQAQK-----GASPAGPTRLLVPASQAGSLIGKQGTTIKS 236
Query: 550 IRETSGASVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQIC----LIMVDSPPKGATI 603
I++ S ++ + ++ P + +R V I+G P V +A+ I +VD + +
Sbjct: 237 IQDASKCALRILENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDR----SVL 292
Query: 604 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGN---------SGGG 654
P F MQ + AP P+ G SG G
Sbjct: 293 PL----------------FEMQMKVHSAPR--EQPMPAPQQWGPPPPWSHPPNIPPSGPG 334
Query: 655 MGGGLNAAALAALASSQLKTN--HMPRNQNQNQNQHNR--NNRDGPS---QKTNQQQNQI 707
GG + S N H+ + + + + R N P+ Q + +Q+
Sbjct: 335 YGGNPHFMPPRPQDSYYPPPNVHHVEKQPHYGISSYGRDANPTAAPTSGNQHLSHGSSQL 394
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+++M VP AVIG G I IRK SGA I I +E + T+ + G+ +
Sbjct: 395 SQKMQVPLSYADAVIGSAGANISYIRKHSGATISI-----QEGVPGEMTVEIAGSASQVQ 449
Query: 768 LAQYLI 773
AQ LI
Sbjct: 450 TAQQLI 455
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 154/359 (42%), Gaps = 66/359 (18%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVT----------VIGSMDSLFR 51
++VG++IG+ GE +K++ +ES ++I I D PER V V ++D L R
Sbjct: 129 QKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDALVPPAIDVLLR 188
Query: 52 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
+ IT ++ K G S RL+VPASQ GS+IGK G+ IK+I++ S
Sbjct: 189 VHNRITDGLDSETDQAQK-----GASPAGPTRLLVPASQAGSLIGKQGTTIKSIQDASKC 243
Query: 112 SVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQIC----LIMVDSPPKGATIPYRPLPQ 165
++ + ++ P + +R V I+G P V +A+ I +VD + +P
Sbjct: 244 ALRILENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDR----SVLPL----- 294
Query: 166 NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGN---------SGGGMGGGLNA 216
F MQ + AP P+ G SG G GG +
Sbjct: 295 -----------FEMQMKVHSAPR--EQPMPAPQQWGPPPPWSHPPNIPPSGPGYGGNPHF 341
Query: 217 AALAALASSQLKTN--HMPRNQNQNQNQHNR--NNRDGPS---QKTNQQQNQITKEMTVP 269
S N H+ + + + + R N P+ Q + +Q++++M VP
Sbjct: 342 MPPRPQDSYYPPPNVHHVEKQPHYGISSYGRDANPTAAPTSGNQHLSHGSSQLSQKMQVP 401
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
AVIG G I IRK SGA I I +E + T+ + G+ + AQ LI
Sbjct: 402 LSYADAVIGSAGANISYIRKHSGATISI-----QEGVPGEMTVEIAGSASQVQTAQQLI 455
>gi|255071283|ref|XP_002507723.1| predicted protein [Micromonas sp. RCC299]
gi|226522998|gb|ACO68981.1| predicted protein [Micromonas sp. RCC299]
Length = 287
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 96/183 (52%), Gaps = 23/183 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G TV +L+ ++GS+I +S ++ T +RIVTV G+ S+
Sbjct: 5 LKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTAPSILG 64
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF L+ I + ++ +GG ++L++P + CG IIG+GG+ I+ + S A
Sbjct: 65 AFHLM---ISKLVRDGEGLVGGRP-----HVKLVIPNASCGCIIGRGGATIRNFADDSQA 116
Query: 557 SVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQI--------CLIMVDSPPKGATIPYR 606
+ ++S MLP ER + I G D V +AI + C + S P TI
Sbjct: 117 EIKLSSQEHMLPGVNERVLTITGANDRVLRAIALVATALSQDGCYEELISRPSTYTIDGM 176
Query: 607 PLP 609
P+P
Sbjct: 177 PMP 179
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 23/173 (13%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G TV +L+ ++GS+I +S ++ T +RIVTV G+ S+ AF L+ I
Sbjct: 15 GSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTAPSILGAFHLM---IS 71
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DM 119
+ ++ +GG ++L++P + CG IIG+GG+ I+ + S A + ++S M
Sbjct: 72 KLVRDGEGLVGGRP-----HVKLVIPNASCGCIIGRGGATIRNFADDSQAEIKLSSQEHM 126
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQI--------CLIMVDSPPKGATIPYRPLP 164
LP ER + I G D V +AI + C + S P TI P+P
Sbjct: 127 LPGVNERVLTITGANDRVLRAIALVATALSQDGCYEELISRPSTYTIDGMPMP 179
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAV 137
I L+ ++P S GSIIGKGG+ + ++ +G+ + + A+++ P + +R V + G ++
Sbjct: 3 ITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTAPSI 62
Query: 138 TQAIYQICLIMVDS--------PPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDM 189
A + + +V P IP G G F +
Sbjct: 63 LGAFHLMISKLVRDGEGLVGGRPHVKLVIPNASCGCIIGRGGATIRNFADDSQAEIKLSS 122
Query: 190 GNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ-------------LKTNHMPRNQ 236
+ L G+ L G L A AL A A SQ + MP
Sbjct: 123 QEHMLPGVNERVL--TITGANDRVLRAIALVATALSQDGCYEELISRPSTYTIDGMPMPY 180
Query: 237 NQNQNQH----NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
+ N N N G SQ + I+ + VP+E IGAV+GKGG I EI+ SG
Sbjct: 181 SGINNDFAAAVNHNVEHGRSQ----DGDVISVAIDVPDEHIGAVLGKGGRTISEIQITSG 236
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
I++S+ + E + +R +T+TG D + +A++L+
Sbjct: 237 IRIKVSERGDYVEGTKNRRVTLTGAGDKVQMARFLL 272
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 33/276 (11%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAV 582
I L+ ++P S GSIIGKGG+ + ++ +G+ + + A+++ P + +R V + G ++
Sbjct: 3 ITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTAPSI 62
Query: 583 TQAIYQICLIMVDS--------PPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDM 634
A + + +V P IP G G F +
Sbjct: 63 LGAFHLMISKLVRDGEGLVGGRPHVKLVIPNASCGCIIGRGGATIRNFADDSQAEIKLSS 122
Query: 635 GNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ-------------LKTNHMPRNQ 681
+ L G+ L G L A AL A A SQ + MP
Sbjct: 123 QEHMLPGVNERVL--TITGANDRVLRAIALVATALSQDGCYEELISRPSTYTIDGMPMPY 180
Query: 682 NQNQNQH----NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
+ N N N G SQ + I+ + VP+E IGAV+GKGG I EI+ SG
Sbjct: 181 SGINNDFAAAVNHNVEHGRSQ----DGDVISVAIDVPDEHIGAVLGKGGRTISEIQITSG 236
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
I++S+ + E + +R +T+TG D + +A++L+
Sbjct: 237 IRIKVSERGDYVEGTKNRRVTLTGAGDKVQMARFLL 272
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 38/185 (20%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
++ ++ G IIG+ G T++ ++S ++I +S ER++T+ G+ D +
Sbjct: 86 HVKLVIPNASCGCIIGRGGATIRNFADDSQAEIKLSSQEHMLPGVNERVLTITGANDRVL 145
Query: 496 RAFSLITKNI------EEFHK-------------------------NQNKHLGGNGESQL 524
RA +L+ + EE N N G + + +
Sbjct: 146 RAIALVATALSQDGCYEELISRPSTYTIDGMPMPYSGINNDFAAAVNHNVEHGRSQDGDV 205
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAV 582
I + + VP G+++GKGG I I+ TSG + V+ D + + R V + G D V
Sbjct: 206 ISVAIDVPDEHIGAVLGKGGRTISEIQITSGIRIKVSERGDYVEGTKNRRVTLTGAGDKV 265
Query: 583 TQAIY 587
A +
Sbjct: 266 QMARF 270
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 38/175 (21%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 60
G IIG+ G T++ ++S ++I +S ER++T+ G+ D + RA +L+ +
Sbjct: 96 CGCIIGRGGATIRNFADDSQAEIKLSSQEHMLPGVNERVLTITGANDRVLRAIALVATAL 155
Query: 61 ------EEFHK-------------------------NQNKHLGGNGESQLIQLRLIVPAS 89
EE N N G + + +I + + VP
Sbjct: 156 SQDGCYEELISRPSTYTIDGMPMPYSGINNDFAAAVNHNVEHGRSQDGDVISVAIDVPDE 215
Query: 90 QCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIY 142
G+++GKGG I I+ TSG + V+ D + + R V + G D V A +
Sbjct: 216 HIGAVLGKGGRTISEIQITSGIRIKVSERGDYVEGTKNRRVTLTGAGDKVQMARF 270
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT + +P+ G++IGKGG + E++ +G+ I++S+++E + DR +T+ GT +I
Sbjct: 3 ITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTAPSI 62
Query: 322 ALAQYLINMSVELLRANLNGEG 343
A +L M +L+R +GEG
Sbjct: 63 LGAFHL--MISKLVR---DGEG 79
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT + +P+ G++IGKGG + E++ +G+ I++S+++E + DR +T+ GT +I
Sbjct: 3 ITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTAPSI 62
Query: 767 ALAQYLINMSVELLRANLNGEG 788
A +L M +L+R +GEG
Sbjct: 63 LGAFHL--MISKLVR---DGEG 79
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 88/155 (56%), Gaps = 15/155 (9%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
+R ++ GS+IGK G T+ + +SG++I +S + T +R+ + GS+ +
Sbjct: 17 LRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSLADVLT 76
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
AF LI I + K+ N+ +++ IQ++L+VP + CG+IIGKGGS IK E S A
Sbjct: 77 AFQLI---ISKIIKDDNQD-----DTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQA 128
Query: 557 SVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQI 589
S+ ++S +LP +R V I G D + +A+ I
Sbjct: 129 SIKLSSQDQLLPGVIDRIVTIGGNVDQIIKAVTLI 163
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 84/145 (57%), Gaps = 15/145 (10%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GS+IGK G T+ + +SG++I +S + T +R+ + GS+ + AF LI I
Sbjct: 27 GSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSLADVLTAFQLI---IS 83
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DM 119
+ K+ N+ +++ IQ++L+VP + CG+IIGKGGS IK E S AS+ ++S +
Sbjct: 84 KIIKDDNQD-----DTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQASIKLSSQDQL 138
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQI 144
LP +R V I G D + +A+ I
Sbjct: 139 LPGVIDRIVTIGGNVDQIIKAVTLI 163
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 55/251 (21%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
I ++ VP + GA+IGKGG+ I + + S A I++S + DR +T+ G D I
Sbjct: 97 IQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQASIKLSSQDQLLPGVIDRIVTIGGNVDQI 156
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
A V L+ L E S +S PL P
Sbjct: 157 IKA-------VTLILTKLTEE-----------SSYTETTSTPLV-----------YPG-- 185
Query: 382 QILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRR 441
T+P + A GL +L G G P Y T+ V
Sbjct: 186 ---TRPTSFIVRCVYHASPGLQNLRRNGP------------GPPMPVAYVGALTSSVTIG 230
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPERIVTVIGSMDSLFR 496
+ + +G I+G++G+T+++L++ SG+KI +SD + T R VT+IGS +++
Sbjct: 231 I----PDEHIGFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQA 286
Query: 497 AFSLITKNIEE 507
A L+T+ +++
Sbjct: 287 AQFLLTQKVQQ 297
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%)
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 772
+P+E IG ++G+ G + E+++ SGA I++S + + R +TM G+ +AI AQ+L
Sbjct: 231 IPDEHIGFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAAQFL 290
Query: 773 INMSVE 778
+ V+
Sbjct: 291 LTQKVQ 296
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 45/182 (24%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP---ERIVTVIGSMDSLFRAFSLI-TKN 59
G+IIGK G +KK E+S + I +S D P +RIVT+ G++D + +A +LI TK
Sbjct: 108 CGAIIGKGGSNIKKFVEDSQASIKLSSQDQLLPGVIDRIVTIGGNVDQIIKAVTLILTKL 167
Query: 60 IEE--------------------------FHKN---QNKHLGGNGESQLI--------QL 82
EE +H + QN G G + +
Sbjct: 168 TEESSYTETTSTPLVYPGTRPTSFIVRCVYHASPGLQNLRRNGPGPPMPVAYVGALTSSV 227
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQA 140
+ +P G I+G+ G ++ ++++SGA + V+ D + + R+V + G +A+ A
Sbjct: 228 TIGIPDEHIGFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAA 287
Query: 141 IY 142
+
Sbjct: 288 QF 289
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD-----SSTPERIVTVIGSMDSLFRAFSLITK 58
+ +G I+G++G+T+++L++ SG+KI +SD + T R VT+IGS +++ A L+T+
Sbjct: 234 EHIGFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAAQFLLTQ 293
Query: 59 NIEE 62
+++
Sbjct: 294 KVQQ 297
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 166/421 (39%), Gaps = 108/421 (25%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VG IIG+ GE +KKL EE+ ++I I D T ER V V
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAP 101
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
++D L R + K I + + G ++ RL+V A+Q GS+IGK G+ IK+
Sbjct: 102 AIDGLLR----VHKCIMDVESDVPSAAG-----VMVSTRLLVVAAQAGSLIGKQGATIKS 152
Query: 550 IRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC----LIMVDS------ 596
I+E S V V + LP + V I+G P +V +A+ I +VD
Sbjct: 153 IQEASNCIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDRSVIKVF 212
Query: 597 ---------------PPKGATIPYRPLPQNAGG-PGLIGNQFGMQNSLMGAPDMGNNPLA 640
PP+ + P + P N GG PG + N MQ
Sbjct: 213 EMEMQKPNTQGNENMPPQQSWDPSQVFPINTGGEPGFVPNLQYMQPPY------------ 260
Query: 641 GLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ-NQNQHNRNNRDG---- 695
QL + P Q +Q+ H++ G
Sbjct: 261 ------------------------------QLDNYYPPPAQTPLDQHHHHQGPPYGRETG 290
Query: 696 -----PSQKTNQQ-QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE 749
PS Q N+IT+ M VP AVIG G I +R+ SGA I I E +
Sbjct: 291 AGVSSPSLTPQQSIVNKITQYMQVPLSYADAVIGASGVNISYVRRTSGATIAI---EETK 347
Query: 750 EDSNDRTITMTGTPDAIALAQYLI-NMSVELLRANLNGEGGGESN-MDDFSSDNNLPSSA 807
+ T+ + G+ + AQ LI N E + LN GG S + F + + +S
Sbjct: 348 GVPGEMTVEINGSVSQVQTAQQLIQNFMAEAASSTLNLAGGAISQGYNPFPTHGAVSTSQ 407
Query: 808 P 808
P
Sbjct: 408 P 408
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 163/414 (39%), Gaps = 108/414 (26%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLFR 51
++VG IIG+ GE +KKL EE+ ++I I D T ER V V ++D L R
Sbjct: 49 QKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAPAIDGLLR 108
Query: 52 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
+ K I + + G ++ RL+V A+Q GS+IGK G+ IK+I+E S
Sbjct: 109 ----VHKCIMDVESDVPSAAG-----VMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNC 159
Query: 112 SVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC----LIMVDS------------- 151
V V + LP + V I+G P +V +A+ I +VD
Sbjct: 160 IVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDRSVIKVFEMEMQKP 219
Query: 152 --------PPKGATIPYRPLPQNAGG-PGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGL 202
PP+ + P + P N GG PG + N MQ
Sbjct: 220 NTQGNENMPPQQSWDPSQVFPINTGGEPGFVPNLQYMQPPY------------------- 260
Query: 203 GGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ-NQNQHNRNNRDG---------PS 252
QL + P Q +Q+ H++ G PS
Sbjct: 261 -----------------------QLDNYYPPPAQTPLDQHHHHQGPPYGRETGAGVSSPS 297
Query: 253 QKTNQQ-QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
Q N+IT+ M VP AVIG G I +R+ SGA I I E + + T
Sbjct: 298 LTPQQSIVNKITQYMQVPLSYADAVIGASGVNISYVRRTSGATIAI---EETKGVPGEMT 354
Query: 312 ITMTGTPDAIALAQYLI-NMSVELLRANLNGEGGGESN-MDDFSSDNNLPSSAP 363
+ + G+ + AQ LI N E + LN GG S + F + + +S P
Sbjct: 355 VEINGSVSQVQTAQQLIQNFMAEAASSTLNLAGGAISQGYNPFPTHGAVSTSQP 408
>gi|195486812|ref|XP_002091665.1| GE12124 [Drosophila yakuba]
gi|194177766|gb|EDW91377.1| GE12124 [Drosophila yakuba]
Length = 497
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 20/193 (10%)
Query: 417 NSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS 476
N G G Q N N +T +R ++ G++IGK G+ ++K+R + + + +
Sbjct: 6 NDAGEGPQDQKRNRRNEET------VRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVD 59
Query: 477 DSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQC 536
DS PER + + ++S + + K EE ++ +RL++ S
Sbjct: 60 DSQGPERTIQISADIESTLEIITEMLKYFEERDED-------------FDVRLLIHQSLA 106
Query: 537 GSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
G +IGKGG +IK IR+ G + V S++ P ST+R V G V A+ ++ + D
Sbjct: 107 GCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQVIDAVREVITLTRD 166
Query: 596 SPPKGATIPYRPL 608
+P KGA Y P+
Sbjct: 167 TPIKGAIHNYDPM 179
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIDAVREVITLTRDTPIKGAIHNYDPM 179
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I +A
Sbjct: 425 QVTIPKELAGAIIGKGGGRIRRIRNESRAYITI---DEPLPNSNDRIITISGTPKQIQMA 481
Query: 325 QYLINMSVE 333
QYL+ SV
Sbjct: 482 QYLLQQSVH 490
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I +A
Sbjct: 425 QVTIPKELAGAIIGKGGGRIRRIRNESRAYITI---DEPLPNSNDRIITISGTPKQIQMA 481
Query: 770 QYLINMSVE 778
QYL+ SV
Sbjct: 482 QYLLQQSVH 490
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 161/383 (42%), Gaps = 70/383 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG---------- 489
R I VG +IGK G T++ L+ E+G+ + + D + + ERI+ +
Sbjct: 159 FRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSP 218
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
S D+L R +S I++ +S + RL+VPA G ++GKGGS I
Sbjct: 219 SQDALLRVYSKISE-------------ASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAE 265
Query: 550 IRETSGASVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSP-PK 599
+R+ +GAS+ + ++ +P +R V + G ++ A+ I LI+ P P
Sbjct: 266 MRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLIIPPKPHPS 325
Query: 600 GATIPYRPL------------PQNAGG--PGLIGNQFGMQNSLMGAPDMGN--------- 636
G PY P+ P + G P + F N MG D+ +
Sbjct: 326 GGMPPYPPVGNPSHHQSRQEAPSHHSGGMPPYPMHPF-RPNPPMGPFDVADPRPPGPPPS 384
Query: 637 NPLAGLAALGLGGNSGGGMGGG---LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNR 693
+P+ + A + G GG + + A T+ PR+ + R
Sbjct: 385 HPMEHMGADRMPYPYGCEQGGPRPFVEQPSPRTWAPEAPATD-APRSMPDTVPA--VDFR 441
Query: 694 DGPSQKTNQQQNQ--ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
GP NQ T E+ +P + IG V G G+ + EI+KISGA I + + +
Sbjct: 442 KGPVSSENQVATPATTTTEVVIPCKYIGFVCGTNGSDLDEIKKISGAAITVHDPKPGDTN 501
Query: 752 SNDRTITMTGTPDAIALAQYLIN 774
S T+ + G P+ AQ LI+
Sbjct: 502 S---TVIICGDPEQTKKAQSLIH 521
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 159/374 (42%), Gaps = 70/374 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMDSLFRAF 53
VG +IGK G T++ L+ E+G+ + + D + + ERI+ + S D+L R +
Sbjct: 168 VGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVY 227
Query: 54 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
S I++ +S + RL+VPA G ++GKGGS I +R+ +GAS+
Sbjct: 228 SKISE-------------ASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASI 274
Query: 114 YV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSP-PKGATIPYRPL 163
+ ++ +P +R V + G ++ A+ I LI+ P P G PY P+
Sbjct: 275 RIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLIIPPKPHPSGGMPPYPPV 334
Query: 164 ------------PQNAGG--PGLIGNQFGMQNSLMGAPDMGN---------NPLAGLAAL 200
P + G P + F N MG D+ + +P+ + A
Sbjct: 335 GNPSHHQSRQEAPSHHSGGMPPYPMHPF-RPNPPMGPFDVADPRPPGPPPSHPMEHMGAD 393
Query: 201 GLGGNSGGGMGGG---LNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQ 257
+ G GG + + A T+ PR+ + R GP NQ
Sbjct: 394 RMPYPYGCEQGGPRPFVEQPSPRTWAPEAPATD-APRSMPDTVPA--VDFRKGPVSSENQ 450
Query: 258 QQNQ--ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
T E+ +P + IG V G G+ + EI+KISGA I + + +S T+ +
Sbjct: 451 VATPATTTTEVVIPCKYIGFVCGTNGSDLDEIKKISGAAITVHDPKPGDTNS---TVIIC 507
Query: 316 GTPDAIALAQYLIN 329
G P+ AQ LI+
Sbjct: 508 GDPEQTKKAQSLIH 521
>gi|198458337|ref|XP_002138531.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
gi|198136305|gb|EDY69089.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
Length = 505
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + +++ + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKAAVSVDDSQGPERTIQISADIEATLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQAQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + +++ + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKAAVSVDDSQGPERTIQISADIEATLEIITEMLKYFEERDED 94
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQAQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 431 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 487
Query: 323 LAQYLINMSVE 333
+AQYL+ SV
Sbjct: 488 MAQYLLQQSVH 498
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 431 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 487
Query: 768 LAQYLINMSVE 778
+AQYL+ SV
Sbjct: 488 MAQYLLQQSVH 498
>gi|409051686|gb|EKM61162.1| hypothetical protein PHACADRAFT_247591 [Phanerochaete carnosa
HHB-10118-sp]
Length = 326
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 93/169 (55%), Gaps = 5/169 (2%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFS 499
+R ++ K+ G IIGK+G+ V +LRE + K +S ER++TV GS++ + +A++
Sbjct: 30 LRSLVSTKDAGVIIGKAGKNVAELREATAVKAGVSKVIPGVHERVLTVTGSVEGVAKAYA 89
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+I + + I RL++ + GS+IG+ G +IK I+++SGA ++
Sbjct: 90 MIVNQLSSTSATSPVSPTPSSSQSSI--RLLISHNLMGSVIGRSGLKIKAIQDSSGARMF 147
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 607
+MLP STER V + G +++ +AI I +++ + T+ + P
Sbjct: 148 AQKEMLPQSTERIVEVHGSAESIGRAIEDIGRALLEDWDRATGTVYFHP 196
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 5/162 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ G IIGK+G+ V +LRE + K +S ER++TV GS++ + +A+++I +
Sbjct: 37 KDAGVIIGKAGKNVAELREATAVKAGVSKVIPGVHERVLTVTGSVEGVAKAYAMIVNQLS 96
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ I RL++ + GS+IG+ G +IK I+++SGA ++ +MLP
Sbjct: 97 STSATSPVSPTPSSSQSSI--RLLISHNLMGSVIGRSGLKIKAIQDSSGARMFAQKEMLP 154
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
STER V + G +++ +AI I +++ + T+ + P
Sbjct: 155 QSTERIVEVHGSAESIGRAIEDIGRALLEDWDRATGTVYFHP 196
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 242 QHNRNNRDGPSQK--------TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
Q R+N D P + + Q N T+ +++P++++G +IG+ GTKI EIR++SG+
Sbjct: 210 QSRRSNGDAPRDRGSPSPSSPSAQPSNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGS 269
Query: 294 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
I I+K E +++ +R T+ GTP+A A +L+ +E
Sbjct: 270 KISIAK--EPHDETGERMFTIVGTPEANEKALFLLYNQLE 307
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 687 QHNRNNRDGPSQK--------TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 738
Q R+N D P + + Q N T+ +++P++++G +IG+ GTKI EIR++SG+
Sbjct: 210 QSRRSNGDAPRDRGSPSPSSPSAQPSNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGS 269
Query: 739 MIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
I I+K E +++ +R T+ GTP+A A +L+ +E
Sbjct: 270 KISIAK--EPHDETGERMFTIVGTPEANEKALFLLYNQLE 307
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 40/186 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ +GS+IG+SG +K +++ SG++++ P ERIV V GS +S+ RA
Sbjct: 115 IRLLISHNLMGSVIGRSGLKIKAIQDSSGARMFAQKEMLPQSTERIVEVHGSAESIGRAI 174
Query: 499 SLITKNIEE----------FHKNQNKHLGG----------NGES---------------- 522
I + + E FH G NG++
Sbjct: 175 EDIGRALLEDWDRATGTVYFHPGAADERSGRRPGQQSRRSNGDAPRDRGSPSPSSPSAQP 234
Query: 523 -QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
L + +P+ G IIG+ G++I IR SG+ + +A + + ER I G P+A
Sbjct: 235 SNLRTQNISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEA 294
Query: 582 VTQAIY 587
+A++
Sbjct: 295 NEKALF 300
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 40/177 (22%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
+GS+IG+SG +K +++ SG++++ P ERIV V GS +S+ RA I + + E
Sbjct: 124 MGSVIGRSGLKIKAIQDSSGARMFAQKEMLPQSTERIVEVHGSAESIGRAIEDIGRALLE 183
Query: 63 ----------FHKNQNKHLGG----------NGES-----------------QLIQLRLI 85
FH G NG++ L +
Sbjct: 184 DWDRATGTVYFHPGAADERSGRRPGQQSRRSNGDAPRDRGSPSPSSPSAQPSNLRTQNIS 243
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
+P+ G IIG+ G++I IR SG+ + +A + + ER I G P+A +A++
Sbjct: 244 IPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALF 300
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 92/163 (56%), Gaps = 12/163 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
+R ++ GS+IGK G TV + +SG++I +S + T +RI+ V GS++ +
Sbjct: 48 LRLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHEFFPGTTDRIILVTGSINEILT 107
Query: 497 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
A +LI + + ++ N + + + Q+RL++P S CG IIGKGG+ IK+ E S A
Sbjct: 108 AANLILQKLLSEAEDNN-----DVDEKTSQVRLVLPNSVCGGIIGKGGATIKSFVEHSQA 162
Query: 557 SVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+ ++S +LP ++R V I G + +AI+ I + + P
Sbjct: 163 SIKLSSQDQILPGVSDRLVTITGTLEQQLRAIFLIVSKLAEDP 205
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GS+IGK G TV + +SG++I +S + T +RI+ V GS++ + A +LI + +
Sbjct: 58 GSVIGKGGATVSDFQTQSGARIQLSRNHEFFPGTTDRIILVTGSINEILTAANLILQKLL 117
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DM 119
++ N + + + Q+RL++P S CG IIGKGG+ IK+ E S AS+ ++S +
Sbjct: 118 SEAEDNN-----DVDEKTSQVRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQI 172
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
LP ++R V I G + +AI+ I + + P
Sbjct: 173 LPGVSDRLVTITGTLEQQLRAIFLIVSKLAEDP 205
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+M VP++ +G ++G+ G I +I+++SGA I+IS + +NDR +T++G DA+ A
Sbjct: 284 KMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRGDFISGTNDRQVTISGPIDAVQHA 343
Query: 325 QYLI--NMSVELLR 336
++++ +S +L R
Sbjct: 344 RHMLEQRLSSDLER 357
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+M VP++ +G ++G+ G I +I+++SGA I+IS + +NDR +T++G DA+ A
Sbjct: 284 KMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRGDFISGTNDRQVTISGPIDAVQHA 343
Query: 770 QYLI--NMSVELLR 781
++++ +S +L R
Sbjct: 344 RHMLEQRLSSDLER 357
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 136/336 (40%), Gaps = 90/336 (26%)
Query: 247 NRDG----PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 302
RDG PS+ ++ + + + V N G+VIGKGG + + + SGA I++S++ E
Sbjct: 29 KRDGLIYEPSEDGSKTSSCL--RLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHE 86
Query: 303 EEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNL--PS 360
+ DR I +TG+ + I A L+ L E +++D+ +S L P+
Sbjct: 87 FFPGTTDRIILVTGSINEILTA-------ANLILQKLLSEAEDNNDVDEKTSQVRLVLPN 139
Query: 361 S----------APLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLL---- 406
S A + + + L QIL PG + L +++ G L L
Sbjct: 140 SVCGGIIGKGGATIKSFVEHSQASIKLSSQDQIL--PGVSDRLVTIT--GTLEQQLRAIF 195
Query: 407 ----------------------GGGSSGGGSGNSGGFGGVPQG-PNYAN----------- 432
GGS G G GG+ V G PNY +
Sbjct: 196 LIVSKLAEDPNYAQYANAPLSYTGGSVAGIQGIPGGYTPVGYGLPNYGSSVYGVNARNNK 255
Query: 433 ------------------IQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIY 474
+ +G ++ + VG I+G++G T+ +++ SG+KI
Sbjct: 256 GLMAPLVAMRSPLPIGVPLVASGALTSVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIK 315
Query: 475 ISD-----SSTPERIVTVIGSMDSLFRAFSLITKNI 505
ISD S T +R VT+ G +D++ A ++ + +
Sbjct: 316 ISDRGDFISGTNDRQVTISGPIDAVQHARHMLEQRL 351
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDA 136
L +++ VP + G I+G+ G I I++ SGA + ++ D + + +R+V I G DA
Sbjct: 280 LTSVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRGDFISGTNDRQVTISGPIDA 339
Query: 137 VTQAIYQI 144
V A + +
Sbjct: 340 VQHARHML 347
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDA 581
L +++ VP + G I+G+ G I I++ SGA + ++ D + + +R+V I G DA
Sbjct: 280 LTSVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRGDFISGTNDRQVTISGPIDA 339
Query: 582 VTQAIYQI 589
V A + +
Sbjct: 340 VQHARHML 347
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 692 NRDG----PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 747
RDG PS+ ++ + + + V N G+VIGKGG + + + SGA I++S++ E
Sbjct: 29 KRDGLIYEPSEDGSKTSSCL--RLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHE 86
Query: 748 EEEDSNDRTITMTGTPDAIALAQYLI 773
+ DR I +TG+ + I A LI
Sbjct: 87 FFPGTTDRIILVTGSINEILTAANLI 112
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP---ERIVTVIGSMDSLF 495
++R ++ G IIGK G T+K E S + I +S D P +R+VT+ G+++
Sbjct: 132 QVRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQILPGVSDRLVTITGTLEQQL 191
Query: 496 RAFSLITKNIEE 507
RA LI + E
Sbjct: 192 RAIFLIVSKLAE 203
Score = 39.7 bits (91), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 700 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 759
+++ +Q+ + +PN + G +IGKGG I + S A I++S + +DR +T+
Sbjct: 126 VDEKTSQV--RLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQILPGVSDRLVTI 183
Query: 760 TGTPDAIALAQYLI 773
TGT + A +LI
Sbjct: 184 TGTLEQQLRAIFLI 197
>gi|194881635|ref|XP_001974928.1| GG22043 [Drosophila erecta]
gi|190658115|gb|EDV55328.1| GG22043 [Drosophila erecta]
Length = 498
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 20/193 (10%)
Query: 417 NSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS 476
N G G Q N N +T +R ++ G++IGK G+ ++K+R + + + +
Sbjct: 6 NDAGEGPQDQKRNRRNEET------VRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVD 59
Query: 477 DSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQC 536
DS PER + + ++S + + K EE ++ +RL++ S
Sbjct: 60 DSQGPERTIQISADIESTLEIITEMLKYFEERDED-------------FDVRLLIHQSLA 106
Query: 537 GSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
G +IGKGG +IK IR+ G + V S++ P ST+R V G V A+ ++ + D
Sbjct: 107 GCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQVIDAVREVITLTRD 166
Query: 596 SPPKGATIPYRPL 608
+P KGA Y P+
Sbjct: 167 TPIKGAIHNYDPM 179
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIDAVREVITLTRDTPIKGAIHNYDPM 179
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 424 TTQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 480
Query: 323 LAQYLINMSVE 333
+AQYL+ SV
Sbjct: 481 MAQYLLQQSVH 491
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 424 TTQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 480
Query: 768 LAQYLINMSVE 778
+AQYL+ SV
Sbjct: 481 MAQYLLQQSVH 491
>gi|324511113|gb|ADY44637.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 581
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK GET+K+L ESG+KI D +TP+R + G+ + + +A I++ +
Sbjct: 237 VGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELV-- 294
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
NK G+G + VPA++ G +IGKGG IK I SGA V ++ + PN
Sbjct: 295 -----NKSGAGSGAEIFY---MHVPANKTGLVIGKGGETIKQICAESGAHVELSREPPPN 346
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
S E+ IKG P + A + I + + D P
Sbjct: 347 SYEKVFIIKGTPYQIHHAQHIIRIKVGDISP 377
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK GET+K+L ESG+KI D +TP+R + G+ + + +A I++ +
Sbjct: 237 VGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELV-- 294
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
NK G+G + VPA++ G +IGKGG IK I SGA V ++ + PN
Sbjct: 295 -----NKSGAGSGAEIFY---MHVPANKTGLVIGKGGETIKQICAESGAHVELSREPPPN 346
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
S E+ IKG P + A + I + + D P
Sbjct: 347 SYEKVFIIKGTPYQIHHAQHIIRIKVGDISP 377
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+ GE + +++ +S ++ +S S R T+ G+ ++ RA S+I I
Sbjct: 45 VGLVIGRGGEQISQIQSQSNCRVQMSPESDGNNMRQCTLQGTKMAVERAKSMIQDVIARA 104
Query: 64 ----HKNQNKHLGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
N+ GG +G + I +++P ++CG +IGKGG IK I+E +G + + +
Sbjct: 105 GNRPPPNRGHFDGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQE 164
Query: 119 MLPNSTE-REVNIKGVPDAVTQA---IYQICLIMVDSPP 153
+ + + + I G PD V A + I D PP
Sbjct: 165 TQESGGQPKPLRIIGEPDKVDTARRMVEDILQSREDHPP 203
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+ GE + +++ +S ++ +S S R T+ G+ ++ RA S+I I
Sbjct: 45 VGLVIGRGGEQISQIQSQSNCRVQMSPESDGNNMRQCTLQGTKMAVERAKSMIQDVIARA 104
Query: 509 ----HKNQNKHLGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
N+ GG +G + I +++P ++CG +IGKGG IK I+E +G + + +
Sbjct: 105 GNRPPPNRGHFDGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQE 164
Query: 564 MLPNSTE-REVNIKGVPDAVTQA---IYQICLIMVDSPP 598
+ + + + I G PD V A + I D PP
Sbjct: 165 TQESGGQPKPLRIIGEPDKVDTARRMVEDILQSREDHPP 203
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS-------TPERIVTVIGSMDSLFRAFSL 55
G + G +IGK GET+K ++E++G K+ + + P RI+ +D+ R
Sbjct: 134 GAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQPKPLRIIGEPDKVDTARRMVED 193
Query: 56 ITKNIEEF--------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
I ++ E+ + + G G Q +IVP + G IIGKGG IK +
Sbjct: 194 ILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEVIVPRASVGMIIGKGGETIKRLAA 253
Query: 108 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGATIPYRPLPQN 166
SGA + D + +R I+G + + +A I L+ GA I Y +P N
Sbjct: 254 ESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELVNKSGAGSGAEIFYMHVPAN 313
Query: 167 AGG 169
G
Sbjct: 314 KTG 316
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
M VP G VIGKGG I +I SGA + +S+ E +S ++ + GTP I AQ
Sbjct: 308 MHVPANKTGLVIGKGGETIKQICAESGAHVELSR--EPPPNSYEKVFIIKGTPYQIHHAQ 365
Query: 326 YLINMSV 332
++I + V
Sbjct: 366 HIIRIKV 372
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
M VP G VIGKGG I +I SGA + +S+ E +S ++ + GTP I AQ
Sbjct: 308 MHVPANKTGLVIGKGGETIKQICAESGAHVELSR--EPPPNSYEKVFIIKGTPYQIHHAQ 365
Query: 771 YLINMSV 777
++I + V
Sbjct: 366 HIIRIKV 372
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP +G +IGKGG I + SGA I+ +E++ + DR + GT + IA A
Sbjct: 229 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 286
Query: 325 QYLINMSVELLRANLNGEGGG 345
I+ EL+ N +G G G
Sbjct: 287 TQFIS---ELV--NKSGAGSG 302
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP +G +IGKGG I + SGA I+ +E++ + DR + GT + IA A
Sbjct: 229 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 286
Query: 770 QYLINMSVELLRANLNGEGGG 790
I+ EL+ N +G G G
Sbjct: 287 TQFIS---ELV--NKSGAGSG 302
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSNDRTITMTGTPD 319
QIT EM +P G VIGKGG I I++ +G M+ I ++ +E + + + G PD
Sbjct: 125 QITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQET--QESGGQPKPLRIIGEPD 182
Query: 320 AIALAQYLIN 329
+ A+ ++
Sbjct: 183 KVDTARRMVE 192
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSNDRTITMTGTPD 764
QIT EM +P G VIGKGG I I++ +G M+ I ++ +E + + + G PD
Sbjct: 125 QITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQET--QESGGQPKPLRIIGEPD 182
Query: 765 AIALAQYLIN 774
+ A+ ++
Sbjct: 183 KVDTARRMVE 192
>gi|194753778|ref|XP_001959187.1| GF12183 [Drosophila ananassae]
gi|190620485|gb|EDV36009.1| GF12183 [Drosophila ananassae]
Length = 511
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P +GA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIRGAIHNYDPM 179
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V +A+ ++ + D+P +GA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIRGAIHNYDPM 179
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 437 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 493
Query: 323 LAQYLINMSVE 333
+AQYL+ SV
Sbjct: 494 MAQYLLQQSVH 504
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ ++T+P EL GA+IGKGG +I IR S A I I E +SNDR IT++GTP I
Sbjct: 437 STQVTIPKELAGAIIGKGGGRIRRIRNESSAYITI---DEPLPNSNDRIITISGTPKQIQ 493
Query: 768 LAQYLINMSVE 778
+AQYL+ SV
Sbjct: 494 MAQYLLQQSVH 504
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 163/380 (42%), Gaps = 69/380 (18%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMD 492
I+ + VGSIIGK G T++ L+ E+G+ I I + + + ER+V + + D
Sbjct: 2 IILNEMVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQD 61
Query: 493 SLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
++ R +S I++ S RL+VP+ G ++GKGGS I +R+
Sbjct: 62 AVVRVYSRISE-------------ASMDRSSPTPARLLVPSQHIGCLLGKGGSIITEMRK 108
Query: 553 TSGASVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSPPKGATI 603
+GAS+ + ++ +P +R V + G ++ A+ I +I+ P G
Sbjct: 109 ITGASIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMP 168
Query: 604 PYRP-----------------LPQNAGGPGLIGNQFGMQNSLMGAPDMGNN---PLAGLA 643
PY P L + G P + F ++ MG + G++ P+ +
Sbjct: 169 PYPPVGNIPVHQSRQEPPPPHLHPSGGMPPYPMHSF-RPDAPMGHFETGDHRPPPVHSME 227
Query: 644 ALG---LGGNSGGGMGGG---LNAAALAALASSQLKTN-HMPRNQNQNQNQHNRNNRDGP 696
+G + + GG GG L + +TN PRN + R GP
Sbjct: 228 YMGADRMPYSYGGEQGGPRPFLEQPSPRTWPPEAPRTNSEAPRNMPDAVLA--TDLRKGP 285
Query: 697 SQKTNQ--QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 754
NQ T E+ +P + IG V G G++I EIR++SGA I + + +S
Sbjct: 286 VASENQVATPTSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGDTNS-- 343
Query: 755 RTITMTGTPDAIALAQYLIN 774
+ + G P+ AQ LI+
Sbjct: 344 -IVVICGDPEQTKKAQSLIH 362
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 160/374 (42%), Gaps = 69/374 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMDSLFRAF 53
VGSIIGK G T++ L+ E+G+ I I + + + ER+V + + D++ R +
Sbjct: 8 VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQDAVVRVY 67
Query: 54 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
S I++ S RL+VP+ G ++GKGGS I +R+ +GAS+
Sbjct: 68 SRISE-------------ASMDRSSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGASI 114
Query: 114 YV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSPPKGATIPYRP-- 162
+ ++ +P +R V + G ++ A+ I +I+ P G PY P
Sbjct: 115 RIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVG 174
Query: 163 ---------------LPQNAGGPGLIGNQFGMQNSLMGAPDMGNN---PLAGLAALG--- 201
L + G P + F ++ MG + G++ P+ + +G
Sbjct: 175 NIPVHQSRQEPPPPHLHPSGGMPPYPMHSF-RPDAPMGHFETGDHRPPPVHSMEYMGADR 233
Query: 202 LGGNSGGGMGGG---LNAAALAALASSQLKTN-HMPRNQNQNQNQHNRNNRDGPSQKTNQ 257
+ + GG GG L + +TN PRN + R GP NQ
Sbjct: 234 MPYSYGGEQGGPRPFLEQPSPRTWPPEAPRTNSEAPRNMPDAVLA--TDLRKGPVASENQ 291
Query: 258 --QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
T E+ +P + IG V G G++I EIR++SGA I + + +S + +
Sbjct: 292 VATPTSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGDTNS---IVVIC 348
Query: 316 GTPDAIALAQYLIN 329
G P+ AQ LI+
Sbjct: 349 GDPEQTKKAQSLIH 362
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 132/570 (23%), Positives = 247/570 (43%), Gaps = 109/570 (19%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN--DRTITMTGTPD 319
+ + P+ +G V+G+GG + +IR+ SGA IR+ ++ D I +TGT
Sbjct: 183 VCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQITGTFP 242
Query: 320 AIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD-NNLPSSAPLAGLNASNPLAAALP 378
A+ A L++ ++ D+ +D N ++ P G+ N +
Sbjct: 243 AVRKALLLVSSCLQ----------------DNPRADATNSAAAKPTGGMLHGNGM----- 281
Query: 379 QLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGV 438
PG L++ G S G +S G+ +P GP + G
Sbjct: 282 --------PGQLDSFPQRGY---------GSSLHGPDYHSRGYSSMP-GP-----ENIGA 318
Query: 439 QRRM--------RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVI 488
RM + + ++VGS+IGK G ++ L+ E+G+ I I+D++ + ER+V VI
Sbjct: 319 NHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVV-VI 377
Query: 489 GSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
+ ++L + S + H + +G + ++ RL+V + Q G ++GKGG I
Sbjct: 378 SARENLEQKHSPAQDAVIRVH-CRIAEIGFEPGAAVVA-RLLVHSQQIGCLLGKGGIIIS 435
Query: 549 TIRETSGASVYV-ASDMLPNS---TEREVNIKGVPDAVTQAIYQIC-------------L 591
+R +GAS+ + A + +P + V + G +V A+++I +
Sbjct: 436 EMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFRITSRIRETIFPLKPSI 495
Query: 592 IMVDSPPKGATIPYRPLP-----QNAGGPGLIGNQFGM-----QNSLMGAP-DMGNNPLA 640
V+ PP ++ P P P + PG + G+ ++++ G P D ++
Sbjct: 496 SNVNGPPYMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPHGIDRSAVPGHPLDHQSSFSH 555
Query: 641 GLAALG----------LGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN-QNQNQNQHN 689
G+ +G GG+ G G + + +S ++ T + N + + +
Sbjct: 556 GVDRIGPSNLDRAPYPYGGDR-PGHGPPFDRPS----SSPRMWTQGVSGNLRGTDVGSGS 610
Query: 690 RNNRDGPSQKTNQQQN--QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 747
+R+GP +Q N T E+ VP L+ V G+ + + +IR+ISGA + I +
Sbjct: 611 LASRNGPPGSGSQAPNITTTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVI---QD 667
Query: 748 EEEDSNDRTITMTGTPDAIALAQYLINMSV 777
S++ + ++GTPD AQ L+ +
Sbjct: 668 PRTGSSEGVVVVSGTPDQTRAAQSLVQAFI 697
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 174/372 (46%), Gaps = 54/372 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
++VGS+IGK G ++ L+ E+G+ I I+D++ + ER+V VI + ++L + S +
Sbjct: 337 EKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVV-VISARENLEQKHSPAQDAVI 395
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDML 120
H + +G + ++ RL+V + Q G ++GKGG I +R +GAS+ + A + +
Sbjct: 396 RVH-CRIAEIGFEPGAAVVA-RLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQV 453
Query: 121 PNS---TEREVNIKGVPDAVTQAIYQIC-------------LIMVDSPPKGATIPYRPLP 164
P + V + G +V A+++I + V+ PP ++ P P P
Sbjct: 454 PKCGSQNDELVQVIGSLQSVQDALFRITSRIRETIFPLKPSISNVNGPPYMSSFPEIPPP 513
Query: 165 -----QNAGGPGLIGNQFGM-----QNSLMGAP-DMGNNPLAGLAALG----------LG 203
+ PG + G+ ++++ G P D ++ G+ +G G
Sbjct: 514 MFRPRHDPASPGHYSSPVGVPHGIDRSAVPGHPLDHQSSFSHGVDRIGPSNLDRAPYPYG 573
Query: 204 GNSGGGMGGGLNAAALAALASSQLKTNHMPRN-QNQNQNQHNRNNRDGPSQKTNQQQN-- 260
G+ G G + + +S ++ T + N + + + +R+GP +Q N
Sbjct: 574 GDR-PGHGPPFDRPS----SSPRMWTQGVSGNLRGTDVGSGSLASRNGPPGSGSQAPNIT 628
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
T E+ VP L+ V G+ + + +IR+ISGA + I + S++ + ++GTPD
Sbjct: 629 TTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVI---QDPRTGSSEGVVVVSGTPDQ 685
Query: 321 IALAQYLINMSV 332
AQ L+ +
Sbjct: 686 TRAAQSLVQAFI 697
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 148/375 (39%), Gaps = 108/375 (28%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R + + G +IGK G +++ RE++G+KI I DS ER++ ++
Sbjct: 58 FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREAS 117
Query: 490 ---------------------------------SMDSLFRAFSLITKNIEEFHKNQNKHL 516
+ +L R F I K EE + + K
Sbjct: 118 AICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKED 177
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDMLPNST---ERE 572
GN + RL+ P++Q G ++G+GG ++ IR+ SGA + V D +P +
Sbjct: 178 LGN---VAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDEL 234
Query: 573 VNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAP 632
+ I G AV +A+ + + D+P AT NS P
Sbjct: 235 IQITGTFPAVRKALLLVSSCLQDNPRADAT-----------------------NSAAAKP 271
Query: 633 DMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNN 692
G L GN GM G L++ SS H P + H+R
Sbjct: 272 TGGM----------LHGN---GMPGQLDSFPQRGYGSSL----HGP-------DYHSRGY 307
Query: 693 RDGPSQK---TNQQ---QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSS 746
P + N + + ++ ++ E +G++IGKGG+ I ++ +GA I+I+ ++
Sbjct: 308 SSMPGPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAA 367
Query: 747 EEEEDSNDRTITMTG 761
DS++R + ++
Sbjct: 368 ---PDSDERVVVISA 379
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 146/367 (39%), Gaps = 108/367 (29%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG------------------ 44
+ G +IGK G +++ RE++G+KI I DS ER++ ++
Sbjct: 66 KTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREASAICGAEAN 125
Query: 45 -------------------------SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL 79
+ +L R F I K EE + + K GN
Sbjct: 126 DGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKEDLGN---VA 182
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDMLPNST---EREVNIKGVPD 135
+ RL+ P++Q G ++G+GG ++ IR+ SGA + V D +P + + I G
Sbjct: 183 VCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQITGTFP 242
Query: 136 AVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLA 195
AV +A+ + + D+P AT NS P G
Sbjct: 243 AVRKALLLVSSCLQDNPRADAT-----------------------NSAAAKPTGGM---- 275
Query: 196 GLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK- 254
L GN GM G L++ SS H P + H+R P +
Sbjct: 276 ------LHGN---GMPGQLDSFPQRGYGSSL----HGP-------DYHSRGYSSMPGPEN 315
Query: 255 --TNQQ---QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 309
N + + ++ ++ E +G++IGKGG+ I ++ +GA I+I+ ++ DS++
Sbjct: 316 IGANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAA---PDSDE 372
Query: 310 RTITMTG 316
R + ++
Sbjct: 373 RVVVISA 379
>gi|195029383|ref|XP_001987553.1| GH21981 [Drosophila grimshawi]
gi|193903553|gb|EDW02420.1| GH21981 [Drosophila grimshawi]
Length = 512
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + +DS +IT+ ++ F +
Sbjct: 34 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIDS---TLEIITEMLKYFEER 90
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
++ +RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 91 DDE----------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 140
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V A+ ++ + D+P KG Y P+
Sbjct: 141 RVVQTVGKQTQVIDAVREVITLTRDTPIKGPIHNYDPM 178
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + +DS +IT+ ++ F +
Sbjct: 34 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIDS---TLEIITEMLKYFEER 90
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
++ +RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 91 DDE----------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 140
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V A+ ++ + D+P KG Y P+
Sbjct: 141 RVVQTVGKQTQVIDAVREVITLTRDTPIKGPIHNYDPM 178
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ ++T+P +L GA+IGKGG +I IR S A I I E SNDR IT++GTP I
Sbjct: 438 STQVTIPKDLAGAIIGKGGGRIRRIRNESSAYITI---DEPLPGSNDRIITISGTPKQIQ 494
Query: 323 LAQYLINMSVE 333
+AQYL+ SV
Sbjct: 495 MAQYLLQQSVH 505
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ ++T+P +L GA+IGKGG +I IR S A I I E SNDR IT++GTP I
Sbjct: 438 STQVTIPKDLAGAIIGKGGGRIRRIRNESSAYITI---DEPLPGSNDRIITISGTPKQIQ 494
Query: 768 LAQYLINMSVE 778
+AQYL+ SV
Sbjct: 495 MAQYLLQQSVH 505
>gi|355709452|gb|AES03596.1| poly binding protein 3 [Mustela putorius furo]
Length = 103
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 1 VQVAGDMLPNSTERAVTISGTPDAIIQCVRQICVVMLESPPKGATIPYRPKP 52
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P
Sbjct: 1 VQVAGDMLPNSTERAVTISGTPDAIIQCVRQICVVMLESPPKGATIPYRPKP 52
>gi|384248088|gb|EIE21573.1| hypothetical protein COCSUDRAFT_17393 [Coccomyxa subellipsoidea
C-169]
Length = 311
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 103/191 (53%), Gaps = 18/191 (9%)
Query: 435 TTGVQRRM-RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVI 488
T G Q+ + + +M GSIIGK G + +L+ +SG+++ +S +S T ER++
Sbjct: 36 TAGEQKVIAKFLMSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVMLAS 95
Query: 489 GSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
GS++ + A LI I+ + + +G+S QLRL+VP CG+IIGKGG+ I+
Sbjct: 96 GSVNQVLTALHLILTKIQ----GEQSMMARDGKS--TQLRLLVPTPLCGAIIGKGGATIR 149
Query: 549 TIRETSGASVYVA-SDMLPNST-EREVNIKGVPDAVTQAIYQICLIMVDSP----PKGAT 602
+ E S A++ V+ D P +R V I G D + +A+ + +V+SP +
Sbjct: 150 SFAEDSRAAITVSPQDKQPLGIPDRVVRITGAQDQLLRAVALLLTKLVESPNYTRFTTSN 209
Query: 603 IPYRPLPQNAG 613
+ Y P PQ+ G
Sbjct: 210 VSYGPPPQHMG 220
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 17/179 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSL 55
M GSIIGK G + +L+ +SG+++ +S +S T ER++ GS++ + A L
Sbjct: 48 MSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVMLASGSVNQVLTALHL 107
Query: 56 ITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
I I+ + + +G+S QLRL+VP CG+IIGKGG+ I++ E S A++ V
Sbjct: 108 ILTKIQ----GEQSMMARDGKS--TQLRLLVPTPLCGAIIGKGGATIRSFAEDSRAAITV 161
Query: 116 A-SDMLPNST-EREVNIKGVPDAVTQAIYQICLIMVDSP----PKGATIPYRPLPQNAG 168
+ D P +R V I G D + +A+ + +V+SP + + Y P PQ+ G
Sbjct: 162 SPQDKQPLGIPDRVVRITGAQDQLLRAVALLLTKLVESPNYTRFTTSNVSYGPPPQHMG 220
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 26/168 (15%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLF 495
++R ++ G+IIGK G T++ E+S + I +S P+R+V + G+ D L
Sbjct: 127 QLRLLVPTPLCGAIIGKGGATIRSFAEDSRAAITVSPQDKQPLGIPDRVVRITGAQDQLL 186
Query: 496 RAFSLI-TKNIEEFHKNQN-----------KHLGGNG-------ESQLIQLRLIVPASQC 536
RA +L+ TK +E + + +H+G + Q +++ + VP ++
Sbjct: 187 RAVALLLTKLVESPNYTRFTTSNVSYGPPPQHMGYQQKGYMQPQQQQRMEVTVPVPEARV 246
Query: 537 GSIIGKGGSQIKTIRETSGASVYVA--SDMLPNSTEREVNIKGVPDAV 582
G+IIGKGG I ++ G + ++ D +P + R+V I G DAV
Sbjct: 247 GAIIGKGGEVISQLKSVIGVKIRISDRDDFVPGTRNRKVTISGAADAV 294
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 26/158 (16%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLI-TKN 59
G+IIGK G T++ E+S + I +S P+R+V + G+ D L RA +L+ TK
Sbjct: 137 CGAIIGKGGATIRSFAEDSRAAITVSPQDKQPLGIPDRVVRITGAQDQLLRAVALLLTKL 196
Query: 60 IEEFHKNQN-----------KHLGGNG-------ESQLIQLRLIVPASQCGSIIGKGGSQ 101
+E + + +H+G + Q +++ + VP ++ G+IIGKGG
Sbjct: 197 VESPNYTRFTTSNVSYGPPPQHMGYQQKGYMQPQQQQRMEVTVPVPEARVGAIIGKGGEV 256
Query: 102 IKTIRETSGASVYVA--SDMLPNSTEREVNIKGVPDAV 137
I ++ G + ++ D +P + R+V I G DAV
Sbjct: 257 ISQLKSVIGVKIRISDRDDFVPGTRNRKVTISGAADAV 294
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVN 129
G GE ++I + ++ + GSIIGKGG+ I ++ SGA + + AS+ P + ER +
Sbjct: 35 GTAGEQKVIA-KFLMSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVML 93
Query: 130 IKGVPDAVTQAIYQICL-------------------IMVDSPPKGATI-----PYRPLPQ 165
G + V A++ I ++V +P GA I R +
Sbjct: 94 ASGSVNQVLTALHLILTKIQGEQSMMARDGKSTQLRLLVPTPLCGAIIGKGGATIRSFAE 153
Query: 166 NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASS 225
++ + Q +G PD G L A AL L +
Sbjct: 154 DSRAAITVSPQ---DKQPLGIPDRVVR-------------ITGAQDQLLRAVAL--LLTK 195
Query: 226 QLKTNHMPRNQNQNQN-----QHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKG 280
+++ + R N + QH + G Q QQ+ ++T + VP +GA+IGKG
Sbjct: 196 LVESPNYTRFTTSNVSYGPPPQHMGYQQKGYMQPQQQQRMEVT--VPVPEARVGAIIGKG 253
Query: 281 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
G I +++ + G IRIS + + +R +T++G DA+ +AQ LI+ +
Sbjct: 254 GEVISQLKSVIGVKIRISDRDDFVPGTRNRKVTISGAADAVQIAQVLIHQKI 305
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVN 574
G GE ++I + ++ + GSIIGKGG+ I ++ SGA + + AS+ P + ER +
Sbjct: 35 GTAGEQKVIA-KFLMSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVML 93
Query: 575 IKGVPDAVTQAIYQICL-------------------IMVDSPPKGATI-----PYRPLPQ 610
G + V A++ I ++V +P GA I R +
Sbjct: 94 ASGSVNQVLTALHLILTKIQGEQSMMARDGKSTQLRLLVPTPLCGAIIGKGGATIRSFAE 153
Query: 611 NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASS 670
++ + Q +G PD G L A AL L +
Sbjct: 154 DSRAAITVSPQ---DKQPLGIPDRVVR-------------ITGAQDQLLRAVAL--LLTK 195
Query: 671 QLKTNHMPRNQNQNQN-----QHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKG 725
+++ + R N + QH + G Q QQ+ ++T + VP +GA+IGKG
Sbjct: 196 LVESPNYTRFTTSNVSYGPPPQHMGYQQKGYMQPQQQQRMEVT--VPVPEARVGAIIGKG 253
Query: 726 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
G I +++ + G IRIS + + +R +T++G DA+ +AQ LI+ +
Sbjct: 254 GEVISQLKSVIGVKIRISDRDDFVPGTRNRKVTISGAADAVQIAQVLIHQKI 305
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 126/284 (44%), Gaps = 50/284 (17%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
+ ++ + + N G++IGKGG I E++ SGA +++S++SE + +R + +G+
Sbjct: 39 EQKVIAKFLMSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVMLASGSV 98
Query: 319 DAIALAQYLINMSVELLRANLNGEGGGESNM---DDFSSDNNLPSSAPLAGL-------- 367
+ + A +LI ++ GE +M D S+ L PL G
Sbjct: 99 NQVLTALHLILTKIQ-----------GEQSMMARDGKSTQLRLLVPTPLCGAIIGKGGAT 147
Query: 368 ---NASNPLAAAL--PQLAQILTKP-------GALNALTSLSALGGLSDLLGGGSSGGGS 415
A + AA PQ Q L P GA + L AL L+ L+ + +
Sbjct: 148 IRSFAEDSRAAITVSPQDKQPLGIPDRVVRITGAQDQLLRAVAL-LLTKLVESPNYTRFT 206
Query: 416 GNSGGFGGVPQGPNYANIQTTGV-----QRRMRHIMQGKE--VGSIIGKSGETVKKLREE 468
++ +G PQ Y Q G Q+RM + E VG+IIGK GE + +L+
Sbjct: 207 TSNVSYGPPPQHMGY---QQKGYMQPQQQQRMEVTVPVPEARVGAIIGKGGEVISQLKSV 263
Query: 469 SGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIEE 507
G KI ISD T R VT+ G+ D++ A LI + I +
Sbjct: 264 IGVKIRISDRDDFVPGTRNRKVTISGAADAVQIAQVLIHQKINQ 307
>gi|195119576|ref|XP_002004307.1| GI19683 [Drosophila mojavensis]
gi|193909375|gb|EDW08242.1| GI19683 [Drosophila mojavensis]
Length = 509
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 84/158 (53%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + +DS +IT+ ++ F +
Sbjct: 34 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISTDIDS---TLEIITEMLKYFEER 90
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
++ +RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 91 DEEY----------DVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 140
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KG Y P+
Sbjct: 141 RVVQTVGKQSQVIEAVREVITLTRDTPIKGPIHNYDPM 178
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 84/158 (53%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + +DS +IT+ ++ F +
Sbjct: 34 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISTDIDS---TLEIITEMLKYFEER 90
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
++ +RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 91 DEEY----------DVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 140
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V +A+ ++ + D+P KG Y P+
Sbjct: 141 RVVQTVGKQSQVIEAVREVITLTRDTPIKGPIHNYDPM 178
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++T+P +L GA+IGKGG +I IR S A I I E SNDR IT++GTP I +A
Sbjct: 437 QVTIPKDLAGAIIGKGGGRIRRIRNESSAYITI---DEPLPGSNDRIITISGTPKQIQMA 493
Query: 325 QYLINMSVE 333
QYL+ SV
Sbjct: 494 QYLLQQSVH 502
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++T+P +L GA+IGKGG +I IR S A I I E SNDR IT++GTP I +A
Sbjct: 437 QVTIPKDLAGAIIGKGGGRIRRIRNESSAYITI---DEPLPGSNDRIITISGTPKQIQMA 493
Query: 770 QYLINMSVE 778
QYL+ SV
Sbjct: 494 QYLLQQSVH 502
>gi|393911660|gb|EJD76408.1| KH domain-containing protein [Loa loa]
Length = 635
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK GET+K+L ESG+KI D +T ER + G+ + + +A I++ +
Sbjct: 285 VGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAVIQGTAEQIAKATQFISELV-- 342
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 343 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 394
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQ 165
++E+ IKG P + A + I I V G P P+PQ
Sbjct: 395 ASEKVFIIKGTPYQIHHAQH-IIRIKV-----GDIAPGTPVPQ 431
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK GET+K+L ESG+KI D +T ER + G+ + + +A I++ +
Sbjct: 285 VGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAVIQGTAEQIAKATQFISELV-- 342
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 343 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 394
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQ 610
++E+ IKG P + A + I I V G P P+PQ
Sbjct: 395 ASEKVFIIKGTPYQIHHAQH-IIRIKV-----GDIAPGTPVPQ 431
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 418 SGGF-GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI- 475
+G F GG+P G TG Q + G + G +IGK GET+K ++E++G K+ +
Sbjct: 165 TGHFDGGIPVG--------TGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 216
Query: 476 ---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLG-----GNGESQLIQL 527
+S + + + G + + A ++ + ++ + H G G G Q
Sbjct: 217 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFPGSFGIGGGQRSIG 276
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+IVP + G IIGKGG IK + SGA + D + ER I+G + + +A
Sbjct: 277 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAVIQGTAEQIAKATQ 336
Query: 588 QIC-LIMVDSPPKGATIPYRPLPQNAGG 614
I L+ GA + Y +P N G
Sbjct: 337 FISELVKKSGAAGGAEMFYMHVPSNKTG 364
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITK 58
G + G +IGK GET+K ++E++G K+ + +S + + + G + + A ++ +
Sbjct: 188 GAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITGDPEKVENARRMVEE 247
Query: 59 NIEEFHKNQNKHLG-----GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
++ + H G G G Q +IVP + G IIGKGG IK + SGA +
Sbjct: 248 ILQSREDHPPGHFGFPGSFGIGGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKI 307
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGATIPYRPLPQNAGG 169
D + ER I+G + + +A I L+ GA + Y +P N G
Sbjct: 308 QFKPDDDQTTQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 364
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 97 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 156
Query: 64 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 115
N+ H G G + I + +P ++CG +IGKGG IK I+E +G V +
Sbjct: 157 GNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 216
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPP 153
+ + + I G P+ V A + +I D PP
Sbjct: 217 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPP 257
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 97 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 156
Query: 509 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 560
N+ H G G + I + +P ++CG +IGKGG IK I+E +G V +
Sbjct: 157 GNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 216
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPP 598
+ + + I G P+ V A + +I D PP
Sbjct: 217 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPP 257
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
M VP+ G VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ
Sbjct: 356 MHVPSNKTGLVIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQ 413
Query: 326 YLINMSV 332
++I + V
Sbjct: 414 HIIRIKV 420
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
M VP+ G VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ
Sbjct: 356 MHVPSNKTGLVIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQ 413
Query: 771 YLINMSV 777
++I + V
Sbjct: 414 HIIRIKV 420
>gi|393911661|gb|EJD76409.1| KH domain-containing protein, variant [Loa loa]
Length = 582
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 14/157 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK GET+K+L ESG+KI D +T ER + G+ + + +A I++ +
Sbjct: 232 VGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAVIQGTAEQIAKATQFISELV-- 289
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 290 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 341
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 159
++E+ IKG P + A + I + + D P G +P
Sbjct: 342 ASEKVFIIKGTPYQIHHAQHIIRIKVGDIAP-GTPVP 377
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 14/157 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK GET+K+L ESG+KI D +T ER + G+ + + +A I++ +
Sbjct: 232 VGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAVIQGTAEQIAKATQFISELV-- 289
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 290 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 341
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 604
++E+ IKG P + A + I + + D P G +P
Sbjct: 342 ASEKVFIIKGTPYQIHHAQHIIRIKVGDIAP-GTPVP 377
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 65/358 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 44 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 103
Query: 64 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 115
N+ H G G + I + +P ++CG +IGKGG IK I+E +G V +
Sbjct: 104 GNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 163
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 172
+ + + I G P+ V A + +I D PP P G G+
Sbjct: 164 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFP--------GSFGI 215
Query: 173 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
G Q + ++ +G +G GG + + A + A Q K +
Sbjct: 216 GGGQRSIGEVIVPRASVG-------MIIGKGGET-------IKRLAAESGAKIQFKPD-- 259
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMT------------------VPNELIG 274
+ R Q T +Q + T+ ++ VP+ G
Sbjct: 260 --------DDQTTQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 311
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ++I + V
Sbjct: 312 LVIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQHIIRIKV 367
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 65/358 (18%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 44 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 103
Query: 509 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 560
N+ H G G + I + +P ++CG +IGKGG IK I+E +G V +
Sbjct: 104 GNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 163
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ + + I G P+ V A + +I D PP P G G+
Sbjct: 164 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFP--------GSFGI 215
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G Q + ++ +G +G GG + + A + A Q K +
Sbjct: 216 GGGQRSIGEVIVPRASVG-------MIIGKGGET-------IKRLAAESGAKIQFKPD-- 259
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMT------------------VPNELIG 719
+ R Q T +Q + T+ ++ VP+ G
Sbjct: 260 --------DDQTTQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 311
Query: 720 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ++I + V
Sbjct: 312 LVIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQHIIRIKV 367
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 418 SGGF-GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI- 475
+G F GG+P G TG Q + G + G +IGK GET+K ++E++G K+ +
Sbjct: 112 TGHFDGGIPVG--------TGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 163
Query: 476 ---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLG-----GNGESQLIQL 527
+S + + + G + + A ++ + ++ + H G G G Q
Sbjct: 164 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFPGSFGIGGGQRSIG 223
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+IVP + G IIGKGG IK + SGA + D + ER I+G + + +A
Sbjct: 224 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQERCAVIQGTAEQIAKATQ 283
Query: 588 QIC-LIMVDSPPKGATIPYRPLPQNAGG 614
I L+ GA + Y +P N G
Sbjct: 284 FISELVKKSGAAGGAEMFYMHVPSNKTG 311
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITK 58
G + G +IGK GET+K ++E++G K+ + +S + + + G + + A ++ +
Sbjct: 135 GAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITGDPEKVENARRMVEE 194
Query: 59 NIEEFHKNQNKHLG-----GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
++ + H G G G Q +IVP + G IIGKGG IK + SGA +
Sbjct: 195 ILQSREDHPPGHFGFPGSFGIGGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKI 254
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGATIPYRPLPQNAGG 169
D + ER I+G + + +A I L+ GA + Y +P N G
Sbjct: 255 QFKPDDDQTTQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 311
>gi|320580877|gb|EFW95099.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 689
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 32/200 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
R ++ +E G+IIGK+G+ + ++RE++ K +S +RI+TV G +D++ RA
Sbjct: 388 YRMLVSRREAGAIIGKNGDNITRIREQTNVKAGVSKVIEGCIDRILTVTGIVDNVPRALV 447
Query: 500 LITKNIEEFHKNQNKHLGGNG---------------------------ESQLIQLRLIVP 532
K + + + NG ++ + LRL++P
Sbjct: 448 QFAKAVTDSNVQTVASASANGTDPTSLITYNFFPLKPLCPTPAASDPFYAETLSLRLLIP 507
Query: 533 ASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--C 590
SQ G++IGKGGS+IK+I+ET + + D L NSTER V ++G + +A+ I C
Sbjct: 508 HSQMGTLIGKGGSRIKSIQETYNIKMVASKDYLRNSTERIVEVQGAKTNLVEALNTISRC 567
Query: 591 LIMVDSPPKGATIPYRPLPQ 610
L + D ATI Y P P+
Sbjct: 568 L-LSDYHGVVATIYYTPSPR 586
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 32/193 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
+E G+IIGK+G+ + ++RE++ K +S +RI+TV G +D++ RA K +
Sbjct: 395 REAGAIIGKNGDNITRIREQTNVKAGVSKVIEGCIDRILTVTGIVDNVPRALVQFAKAVT 454
Query: 62 EFHKNQNKHLGGNG---------------------------ESQLIQLRLIVPASQCGSI 94
+ + NG ++ + LRL++P SQ G++
Sbjct: 455 DSNVQTVASASANGTDPTSLITYNFFPLKPLCPTPAASDPFYAETLSLRLLIPHSQMGTL 514
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSP 152
IGKGGS+IK+I+ET + + D L NSTER V ++G + +A+ I CL + D
Sbjct: 515 IGKGGSRIKSIQETYNIKMVASKDYLRNSTERIVEVQGAKTNLVEALNTISRCL-LSDYH 573
Query: 153 PKGATIPYRPLPQ 165
ATI Y P P+
Sbjct: 574 GVVATIYYTPSPR 586
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 143/364 (39%), Gaps = 94/364 (25%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
DG + + ++ IT M V GA+IGK G I IR+ + +SK E
Sbjct: 373 DGMTNDVDLGKSLITYRMLVSRREAGAIIGKNGDNITRIREQTNVKAGVSKVIE---GCI 429
Query: 309 DRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLN 368
DR +T+TG D + A L+ + + +N+ +N D P+S
Sbjct: 430 DRILTVTGIVDNVPRA--LVQFAKAVTDSNVQTVASASANGTD-------PTSLITYNFF 480
Query: 369 ASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGP 428
PL P A SD P
Sbjct: 481 PLKPLCPT----------PAA-------------SD-----------------------P 494
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREES-----GSKIYISDSSTPER 483
YA + +R ++ ++G++IGK G +K ++E SK Y+ +S+ ER
Sbjct: 495 FYAETLS------LRLLIPHSQMGTLIGKGGSRIKSIQETYNIKMVASKDYLRNST--ER 546
Query: 484 IVTVIGSMDSLFRAFSLITKNI-EEFH-----------KNQNKHLGGN--------GESQ 523
IV V G+ +L A + I++ + ++H Q + GG+ G +
Sbjct: 547 IVEVQGAKTNLVEALNTISRCLLSDYHGVVATIYYTPSPRQPPYKGGSKLDPQQGTGSDK 606
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST-EREVNIKGVPDAV 582
I + P G++IGK GS+I+ IR TSG ++ + D N +RE + G +V
Sbjct: 607 EISEKTSFPGEFVGALIGKKGSRIQEIRRTSGCTINI--DAEDNEQGQREFTLTGTTLSV 664
Query: 583 TQAI 586
+A+
Sbjct: 665 DRAL 668
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
+I+++ + P E +GA+IGK G++I EIR+ SG I I E+ + R T+TGT
Sbjct: 607 EISEKTSFPGEFVGALIGKKGSRIQEIRRTSGCTINIDA---EDNEQGQREFTLTGT 660
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 30/163 (18%)
Query: 5 EVGSIIGKSGETVKKLREES-----GSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKN 59
++G++IGK G +K ++E SK Y+ +S+ ERIV V G+ +L A + I++
Sbjct: 510 QMGTLIGKGGSRIKSIQETYNIKMVASKDYLRNST--ERIVEVQGAKTNLVEALNTISRC 567
Query: 60 I-EEFH-----------KNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGG 99
+ ++H Q + GG+ G + I + P G++IGK G
Sbjct: 568 LLSDYHGVVATIYYTPSPRQPPYKGGSKLDPQQGTGSDKEISEKTSFPGEFVGALIGKKG 627
Query: 100 SQIKTIRETSGASVYVASDMLPNST-EREVNIKGVPDAVTQAI 141
S+I+ IR TSG ++ + D N +RE + G +V +A+
Sbjct: 628 SRIQEIRRTSGCTINI--DAEDNEQGQREFTLTGTTLSVDRAL 668
>gi|195401727|ref|XP_002059464.1| GJ17213 [Drosophila virilis]
gi|194142470|gb|EDW58876.1| GJ17213 [Drosophila virilis]
Length = 511
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + +DS + + K EE
Sbjct: 34 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISTDIDSTLEIITEMLKYFEE---- 89
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+ +RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 90 ---------RDEEFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 140
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V A+ ++ + D+P KG Y P+
Sbjct: 141 RVVQTVGKQSQVIDAVREVITLTRDTPIKGPIHNYDPM 178
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + +DS + + K EE
Sbjct: 34 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISTDIDSTLEIITEMLKYFEE---- 89
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
+ +RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 90 ---------RDEEFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 140
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V A+ ++ + D+P KG Y P+
Sbjct: 141 RVVQTVGKQSQVIDAVREVITLTRDTPIKGPIHNYDPM 178
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++T+P +L GA+IGKGG +I IR S A I I E SNDR IT++GTP I +A
Sbjct: 439 QVTIPKDLAGAIIGKGGGRIRRIRNESSAYITI---DEPLPGSNDRIITISGTPKQIQMA 495
Query: 325 QYLINMSVE 333
QYL+ SV
Sbjct: 496 QYLLQQSVH 504
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++T+P +L GA+IGKGG +I IR S A I I E SNDR IT++GTP I +A
Sbjct: 439 QVTIPKDLAGAIIGKGGGRIRRIRNESSAYITI---DEPLPGSNDRIITISGTPKQIQMA 495
Query: 770 QYLINMSVE 778
QYL+ SV
Sbjct: 496 QYLLQQSVH 504
>gi|302800040|ref|XP_002981778.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
gi|300150610|gb|EFJ17260.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
Length = 310
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 14/178 (7%)
Query: 437 GVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSM 491
G Q R ++ E GS+IGK G T+ L+ +SG++I +S S T +R+V + G++
Sbjct: 33 GSQSSARFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSGAI 92
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+ + A +LI I++ ++ ++ +S+ QLRL+VP S CG+IIGKGG IK+
Sbjct: 93 NDVLTALNLILSKIQKETEDDSQT-----DSKPNQLRLVVPNSVCGAIIGKGGGTIKSFI 147
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
E S AS+ + S +L ++R V I G ++ Q + + LI+ + + Y P
Sbjct: 148 EDSEASIKL-SGILQGISDRLVTITG---SIEQQLKAVELILTKLLGDSSYLDYAAAP 201
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 93/165 (56%), Gaps = 14/165 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKN 59
E GS+IGK G T+ L+ +SG++I +S S T +R+V + G+++ + A +LI
Sbjct: 46 EAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSGAINDVLTALNLILSK 105
Query: 60 IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
I++ ++ ++ +S+ QLRL+VP S CG+IIGKGG IK+ E S AS+ + S +
Sbjct: 106 IQKETEDDSQT-----DSKPNQLRLVVPNSVCGAIIGKGGGTIKSFIEDSEASIKL-SGI 159
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
L ++R V I G ++ Q + + LI+ + + Y P
Sbjct: 160 LQGISDRLVTITG---SIEQQLKAVELILTKLLGDSSYLDYAAAP 201
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS-NDRTITMTGTPDAIALA 324
+ VP+E IGA++G+GG + EI++ SG I+IS+ + + N R +T+ GT + + +A
Sbjct: 235 LAVPDEHIGAIVGRGGKTLGEIQQASGVTIKISERGDFVSGTKNSRKVTLVGTAEGLQIA 294
Query: 325 QYLINMSVE 333
Q+ + V+
Sbjct: 295 QFYLTAKVQ 303
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS-NDRTITMTGTPDAIALA 769
+ VP+E IGA++G+GG + EI++ SG I+IS+ + + N R +T+ GT + + +A
Sbjct: 235 LAVPDEHIGAIVGRGGKTLGEIQQASGVTIKISERGDFVSGTKNSRKVTLVGTAEGLQIA 294
Query: 770 QYLINMSVE 778
Q+ + V+
Sbjct: 295 QFYLTAKVQ 303
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQA 140
R +V ++ GS+IGKGG+ I ++ SGA + + + D P +T+R V + G + V A
Sbjct: 39 RFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSGAINDVLTA 98
Query: 141 I 141
+
Sbjct: 99 L 99
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 164/350 (46%), Gaps = 45/350 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMD----SLF 495
R + +G +IGKSG +K L+ +G+KI I DS +P+R++ VIG+ + +
Sbjct: 50 FRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKVMV 109
Query: 496 RAFS------LITKNIEEFHKNQNKHLGGNGESQLIQL-------RLIVPASQCGSIIGK 542
R+ S ++K E + ++ L E + I+L RL+ ++Q GS+IGK
Sbjct: 110 RSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSVIGK 169
Query: 543 GGSQIKTIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
GG ++ I++ +G ++V D LP +S + + I+G +V +A+ + + D
Sbjct: 170 GGKVVEKIKKDTGCKIWVCKDNLPACISSPDEVIEIEGSVSSVKKALVAVSRNLQDRHHA 229
Query: 600 GATIPYRPLPQNA----GGPGLIGNQFGMQNSLMGAP--DMGNNPLAGLAALGLGGNSGG 653
T + QN+ L+G + +LM P P L A+ +
Sbjct: 230 DRT---KMTGQNSHEVIHHEALVGVP---RETLMSVPRETFIGAPRETLTAVPCETLTDL 283
Query: 654 GMGGGL-NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMT 712
+ L +AL+ L SS +N + + NR + P K +QQ +IT ++
Sbjct: 284 HVDHLLQRRSALSILPSS---SNSYATGVHSLSAEVNRVSSLEP--KAHQQ--EITFKII 336
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
N+ IG VIGKGG I ++ +GA + + S E E DR IT+T +
Sbjct: 337 CSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECE---DRLITITAS 383
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 162/342 (47%), Gaps = 45/342 (13%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMD----SLFRAFS---- 54
+G +IGKSG +K L+ +G+KI I DS +P+R++ VIG+ + + R+ S
Sbjct: 58 RIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKVMVRSHSGDGE 117
Query: 55 --LITKNIEEFHKNQNKHLGGNGESQLIQL-------RLIVPASQCGSIIGKGGSQIKTI 105
++K E + ++ L E + I+L RL+ ++Q GS+IGKGG ++ I
Sbjct: 118 AIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSVIGKGGKVVEKI 177
Query: 106 RETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
++ +G ++V D LP +S + + I+G +V +A+ + + D T +
Sbjct: 178 KKDTGCKIWVCKDNLPACISSPDEVIEIEGSVSSVKKALVAVSRNLQDRHHADRT---KM 234
Query: 163 LPQNA----GGPGLIGNQFGMQNSLMGAP--DMGNNPLAGLAALGLGGNSGGGMGGGL-N 215
QN+ L+G + +LM P P L A+ + + L
Sbjct: 235 TGQNSHEVIHHEALVGVP---RETLMSVPRETFIGAPRETLTAVPCETLTDLHVDHLLQR 291
Query: 216 AAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGA 275
+AL+ L SS +N + + NR + P K +QQ +IT ++ N+ IG
Sbjct: 292 RSALSILPSS---SNSYATGVHSLSAEVNRVSSLEP--KAHQQ--EITFKIICSNDRIGG 344
Query: 276 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
VIGKGG I ++ +GA + + S E E DR IT+T +
Sbjct: 345 VIGKGGNIIRALQSETGATVSVGPSVAECE---DRLITITAS 383
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+ VP + + V G+ G+ + +R+ISGA + I E ++DRTI ++G+PD
Sbjct: 695 TIEIVVPEDTLYLVYGENGSNLARLRQISGAKVVI---HEPRPGTSDRTIVLSGSPDETQ 751
Query: 323 LAQYLI 328
AQ L+
Sbjct: 752 AAQSLL 757
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+ VP + + V G+ G+ + +R+ISGA + I E ++DRTI ++G+PD
Sbjct: 695 TIEIVVPEDTLYLVYGENGSNLARLRQISGAKVVI---HEPRPGTSDRTIVLSGSPDETQ 751
Query: 768 LAQYLI 773
AQ L+
Sbjct: 752 AAQSLL 757
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFS 499
+ I +G +IGK G ++ L+ E+G+ + + S + +R++T+ S R
Sbjct: 333 FKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESRYSP 392
Query: 500 LITKNIEEFHKNQNKHLGGNGESQL-----IQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
+ F ++ + +S L + +L+V ++Q G ++GKGG + +R+ +
Sbjct: 393 AQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRKAT 452
Query: 555 GASV-YVASDMLPNST---EREVNIKGVPDAVTQAIY 587
GAS+ V +D + ++ V I G V A+Y
Sbjct: 453 GASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALY 489
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
+G +IGK G ++ L+ E+G+ + + S + +R++T+ S R +
Sbjct: 341 RIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESRYSPAQKATVLV 400
Query: 63 FHKNQNKHLGGNGESQL-----IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV-YVA 116
F ++ + +S L + +L+V ++Q G ++GKGG + +R+ +GAS+ V
Sbjct: 401 FSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRKATGASIRIVG 460
Query: 117 SDMLPNST---EREVNIKGVPDAVTQAIY 142
+D + ++ V I G V A+Y
Sbjct: 461 TDKVSKCASDNDQVVQISGEFSNVQDALY 489
>gi|378792552|pdb|3VKE|A Chain A, Contribution Of The First K-Homology Domain Of
Poly(C)-Binding Protein 1 To Its Affinity And
Specificity For C-Rich Oligonucleotides
gi|378792553|pdb|3VKE|B Chain B, Contribution Of The First K-Homology Domain Of
Poly(C)-Binding Protein 1 To Its Affinity And
Specificity For C-Rich Oligonucleotides
gi|378792554|pdb|3VKE|C Chain C, Contribution Of The First K-Homology Domain Of
Poly(C)-Binding Protein 1 To Its Affinity And
Specificity For C-Rich Oligonucleotides
gi|378792555|pdb|3VKE|D Chain D, Contribution Of The First K-Homology Domain Of
Poly(C)-Binding Protein 1 To Its Affinity And
Specificity For C-Rich Oligonucleotides
Length = 76
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 55/66 (83%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GE+VK++REESG++I IS+ ++PERI+T+ G +++F+AF++I
Sbjct: 5 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNSPERIITLTGPTNAIFKAFAMI 64
Query: 502 TKNIEE 507
+EE
Sbjct: 65 IDKLEE 70
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 52/62 (83%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ ++PERI+T+ G +++F+AF++I +
Sbjct: 9 MHGKEVGSIIGKKGESVKRIREESGARINISEGNSPERIITLTGPTNAIFKAFAMIIDKL 68
Query: 61 EE 62
EE
Sbjct: 69 EE 70
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 78 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 137
++ +RL++ + GSIIGK G +K IRE SGA + ++ NS ER + + G +A+
Sbjct: 1 HMLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG---NSPERIITLTGPTNAI 57
Query: 138 TQAIYQIC 145
+A I
Sbjct: 58 FKAFAMII 65
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 523 QLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV 582
++ +RL++ + GSIIGK G +K IRE SGA + ++ NS ER + + G +A+
Sbjct: 1 HMLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG---NSPERIITLTGPTNAI 57
Query: 583 TQAIYQIC 590
+A I
Sbjct: 58 FKAFAMII 65
>gi|109157031|pdb|1ZTG|A Chain A, Human Alpha Polyc Binding Protein Kh1
gi|109157032|pdb|1ZTG|B Chain B, Human Alpha Polyc Binding Protein Kh1
gi|109157033|pdb|1ZTG|C Chain C, Human Alpha Polyc Binding Protein Kh1
gi|109157034|pdb|1ZTG|D Chain D, Human Alpha Polyc Binding Protein Kh1
Length = 74
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 54/66 (81%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I
Sbjct: 5 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMI 64
Query: 502 TKNIEE 507
+EE
Sbjct: 65 IDKLEE 70
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 51/62 (82%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 9 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 68
Query: 61 EE 62
EE
Sbjct: 69 EE 70
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
++ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+
Sbjct: 2 ILTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIF 58
Query: 139 QAIYQI 144
+A I
Sbjct: 59 KAFAMI 64
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
++ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+
Sbjct: 2 ILTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIF 58
Query: 584 QAIYQI 589
+A I
Sbjct: 59 KAFAMI 64
>gi|375065844|ref|NP_001243477.1| heterogeneous nuclear ribonucleoprotein K [Canis lupus familiaris]
Length = 464
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKKFGGNTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKKFGGNTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
>gi|430812290|emb|CCJ30285.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 341
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 96/166 (57%), Gaps = 9/166 (5%)
Query: 8 SIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
+I+ +SGE + L+E++G++I+++++ + ERI+T IG+ S+ +AFSL+ + + +
Sbjct: 2 AIVEESGENITLLQEKTGARIFLTENVLGSVERILTCIGTPKSVAKAFSLVLRLLHS--E 59
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+ + L N + + ++RL +P +IGK GS+I I++ S A + + +LP STE
Sbjct: 60 DLDSVLISNDKPR--RVRLAIPHIFIEPLIGKHGSRINEIQKISRAHITASDSLLPLSTE 117
Query: 126 REVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRPLPQNAG 168
R + I G DA+ AI+ + + ++ D T Y PL + G
Sbjct: 118 RTLVIYGTEDAIYAAIFHVSITLIQQADHITNLQTCLYNPLSMHGG 163
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 96/166 (57%), Gaps = 9/166 (5%)
Query: 453 SIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEFHK 510
+I+ +SGE + L+E++G++I+++++ + ERI+T IG+ S+ +AFSL+ + + +
Sbjct: 2 AIVEESGENITLLQEKTGARIFLTENVLGSVERILTCIGTPKSVAKAFSLVLRLLHS--E 59
Query: 511 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 570
+ + L N + + ++RL +P +IGK GS+I I++ S A + + +LP STE
Sbjct: 60 DLDSVLISNDKPR--RVRLAIPHIFIEPLIGKHGSRINEIQKISRAHITASDSLLPLSTE 117
Query: 571 REVNIKGVPDAVTQAIYQICLIMV---DSPPKGATIPYRPLPQNAG 613
R + I G DA+ AI+ + + ++ D T Y PL + G
Sbjct: 118 RTLVIYGTEDAIYAAIFHVSITLIQQADHITNLQTCLYNPLSMHGG 163
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 28/30 (93%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
IT+++ +PN+++GA+IGKGGTKI EIR++S
Sbjct: 260 ITQQIFIPNDMVGAIIGKGGTKINEIRQLS 289
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 28/30 (93%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
IT+++ +PN+++GA+IGKGGTKI EIR++S
Sbjct: 260 ITQQIFIPNDMVGAIIGKGGTKINEIRQLS 289
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ +P+ I +IGK G++I EI+KIS A I+ S S +RT+ + GT DAI A
Sbjct: 75 RLAIPHIFIEPLIGKHGSRINEIQKISRA--HITASDSLLPLSTERTLVIYGTEDAIYAA 132
Query: 325 QYLINMSVELLR 336
+ ++S+ L++
Sbjct: 133 --IFHVSITLIQ 142
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ +P+ I +IGK G++I EI+KIS A I+ S S +RT+ + GT DAI A
Sbjct: 75 RLAIPHIFIEPLIGKHGSRINEIQKISRA--HITASDSLLPLSTERTLVIYGTEDAIYAA 132
Query: 770 QYLINMSVELLR 781
+ ++S+ L++
Sbjct: 133 --IFHVSITLIQ 142
>gi|365761950|gb|EHN03570.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 167/367 (45%), Gaps = 40/367 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
+R + K I+G G T+ +++ E+ ++I +S++ PERI+ V G+ D + +A+
Sbjct: 72 LRMLCLVKHASLIVGHKGATISRIKSETSARINVSNNIRGVPERIIYVRGTCDDVAKAYG 131
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+I + + + E + + L++P G IIGK GS+++ I + S A ++
Sbjct: 132 MIVRALL-----EEHENESEEEDIEVSINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLF 186
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIY---QICL-IMVDSPPK--GATIPYRPLPQNAG 613
+ + L S +R + I GVPDA+ A + Q L ++SP K +I Y+P N+
Sbjct: 187 ASPNQLLLSNDRILTISGVPDAIHIATFYVGQTLLNFQIESPQKKLKRSIFYQPTQFNS- 245
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
+ N+++ + +P L L N + ++ L ++A Q
Sbjct: 246 ----VLLDHSQSNAVLHQRNHQYHPNDKL--LSCRPNRKFSV-----SSTLLSMAPPQYT 294
Query: 674 TNHMPRNQNQNQNQHNRNNR--------DGPSQKTNQQQNQITKEMTVPNELIGAVIGKG 725
T + + N N R GPS + N +E+ + +G VIGK
Sbjct: 295 TASVANATAFHPNFVIPNVRILDAPVIDQGPSNHLS--MNLFQQEIFIDENFVGNVIGKD 352
Query: 726 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 785
G I +++ +G I + S+ E S++R +++ GT A A LI+ +E+ R LN
Sbjct: 353 GKHINSVKESTGCSIIVQDSA---EGSSERRLSIRGTFMASQAAIMLISNKIEIDR--LN 407
Query: 786 GEGGGES 792
E S
Sbjct: 408 AERKRRS 414
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 40/360 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K I+G G T+ +++ E+ ++I +S++ PERI+ V G+ D + +A+ +I + +
Sbjct: 79 KHASLIVGHKGATISRIKSETSARINVSNNIRGVPERIIYVRGTCDDVAKAYGMIVRALL 138
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ E + + L++P G IIGK GS+++ I + S A ++ + + L
Sbjct: 139 -----EEHENESEEEDIEVSINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL 193
Query: 122 NSTEREVNIKGVPDAVTQAIY---QICL-IMVDSPPK--GATIPYRPLPQNAGGPGLIGN 175
S +R + I GVPDA+ A + Q L ++SP K +I Y+P N+ +
Sbjct: 194 LSNDRILTISGVPDAIHIATFYVGQTLLNFQIESPQKKLKRSIFYQPTQFNS-----VLL 248
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
N+++ + +P L L N + ++ L ++A Q T +
Sbjct: 249 DHSQSNAVLHQRNHQYHPNDKL--LSCRPNRKFSV-----SSTLLSMAPPQYTTASVANA 301
Query: 236 QNQNQNQHNRNNR--------DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+ N N R GPS + N +E+ + +G VIGK G I +
Sbjct: 302 TAFHPNFVIPNVRILDAPVIDQGPSNHLS--MNLFQQEIFIDENFVGNVIGKDGKHINSV 359
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 347
++ +G I + S+ E S++R +++ GT A A LI+ +E+ R LN E S
Sbjct: 360 KESTGCSIIVQDSA---EGSSERRLSIRGTFMASQAAIMLISNKIEIDR--LNAERKRRS 414
>gi|358335626|dbj|GAA29562.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 673
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 27/210 (12%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI- 60
G+IIGK GE + ++ ++ +K+ +S ++ T ER+ ++G++DS+ R F I++ I
Sbjct: 40 GAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTIDSILRVFQYISEKIY 99
Query: 61 ---EEFHKNQNKHLGGNGESQLI-QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
E ++ NK GG ++ Q++++VP S G IIGKGGS IK ++E++G + V+
Sbjct: 100 EKPESILRSTNK--GGRMPAERHKQVKILVPNSTAGIIIGKGGSFIKEVKESTGVFIQVS 157
Query: 117 --SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT--IPYRPLPQNA----- 167
S L N ER V + G +A+ Q+ + D P + I Y +P+
Sbjct: 158 QKSKEL-NLAERCVTVAGELPQTFEAVKQLLFKIADDPQSSSCPNISYAEVPRPVASAYP 216
Query: 168 -GGPG--LIGNQFGMQNSLMGAPDMGNNPL 194
G P ++G+ FG+ N + P G++ L
Sbjct: 217 TGSPYALVLGSSFGINNCSL--PSAGSDQL 244
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 27/210 (12%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI- 505
G+IIGK GE + ++ ++ +K+ +S ++ T ER+ ++G++DS+ R F I++ I
Sbjct: 40 GAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTIDSILRVFQYISEKIY 99
Query: 506 ---EEFHKNQNKHLGGNGESQLI-QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
E ++ NK GG ++ Q++++VP S G IIGKGGS IK ++E++G + V+
Sbjct: 100 EKPESILRSTNK--GGRMPAERHKQVKILVPNSTAGIIIGKGGSFIKEVKESTGVFIQVS 157
Query: 562 --SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT--IPYRPLPQNA----- 612
S L N ER V + G +A+ Q+ + D P + I Y +P+
Sbjct: 158 QKSKEL-NLAERCVTVAGELPQTFEAVKQLLFKIADDPQSSSCPNISYAEVPRPVASAYP 216
Query: 613 -GGPG--LIGNQFGMQNSLMGAPDMGNNPL 639
G P ++G+ FG+ N + P G++ L
Sbjct: 217 TGSPYALVLGSSFGINNCSL--PSAGSDQL 244
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAV 137
+ +++VP+ G+IIGKGG I I+ + A V + A+D P +TER I G D++
Sbjct: 28 VHFKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTIDSI 87
Query: 138 TQAIYQICLIMVDSP 152
+ I + + P
Sbjct: 88 LRVFQYISEKIYEKP 102
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAV 582
+ +++VP+ G+IIGKGG I I+ + A V + A+D P +TER I G D++
Sbjct: 28 VHFKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTIDSI 87
Query: 583 TQAIYQICLIMVDSP 597
+ I + + P
Sbjct: 88 LRVFQYISEKIYEKP 102
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI-AL 323
++ VP+ GA+IGKGG I +I+ + A +++SK+++ + +R + GT D+I +
Sbjct: 31 KILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTIDSILRV 90
Query: 324 AQYL 327
QY+
Sbjct: 91 FQYI 94
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI-AL 768
++ VP+ GA+IGKGG I +I+ + A +++SK+++ + +R + GT D+I +
Sbjct: 31 KILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTIDSILRV 90
Query: 769 AQYL 772
QY+
Sbjct: 91 FQYI 94
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
++ Q+ ++ VPN G +IGKGG+ I E+++ +G I++S+ S+E + +R +T+ G
Sbjct: 118 ERHKQV--KILVPNSTAGIIIGKGGSFIKEVKESTGVFIQVSQKSKELNLA-ERCVTVAG 174
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
++ Q+ ++ VPN G +IGKGG+ I E+++ +G I++S+ S+E + +R +T+ G
Sbjct: 118 ERHKQV--KILVPNSTAGIIIGKGGSFIKEVKESTGVFIQVSQKSKELNLA-ERCVTVAG 174
>gi|452821097|gb|EME28131.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
gi|452821098|gb|EME28132.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 590
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 162/360 (45%), Gaps = 33/360 (9%)
Query: 441 RMRHIMQGKE-VGSIIGKSGETVKKLREESGSKIYIS----DSSTPERIVTVIGSMDSLF 495
+M I KE VG IIGK GET+K+L +SG+ + + D+S+ R+ + G + +
Sbjct: 122 KMDFIEVPKEAVGFIIGKGGETIKELSMKSGAYMEVERRDIDASSANRLFRIQGISNHIQ 181
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
A LI + + Q+ + IQ L +P + G IIG GG IK++ E S
Sbjct: 182 LAKQLILEKVAGVLVGQS--VCSVTSVGSIQSELWIPMDRVGVIIGIGGQTIKSLEEQSQ 239
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK--GATIPYRPLPQNAG 613
++ V ++ + E+ V I G P V A I I + P + AT+ Y P+
Sbjct: 240 TTIVVHNEKVNALGEKLVTIVGKPQEVHIAEMLIQEI-IQKPSRVMNATL-YSPVMGQTT 297
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNA---AALAALASS 670
PGL+ + + P ++G+ G L A++ + +
Sbjct: 298 YPGLVSPELSYLSRTSLRPMTNKTIFVPRKSIGMIIGKRGETIRDLQYRSGASIRVVPDN 357
Query: 671 QLKTNHMPR------NQNQNQNQHNRNNR-----------DGPSQKTNQQQNQITKEMTV 713
++ N + R + + HN N D KT I+ + +
Sbjct: 358 EVSVNTVERPIIVSGSLESVELAHNLINDIVNEGIERLGGDLSESKTLYPSASISLRIQI 417
Query: 714 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
PN+ +G +IGK G+ I E+++ SGA I+++K S E D + R++T+TG P + +A+ LI
Sbjct: 418 PNDKVGWLIGKSGSTIRELQQRSGARIQVAKPS--ETDIHTRSVTITGPPPFVEIAKQLI 475
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 157/349 (44%), Gaps = 32/349 (9%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS----DSSTPERIVTVIGSMDSLFRAFSLITKNIE 61
VG IIGK GET+K+L +SG+ + + D+S+ R+ + G + + A LI + +
Sbjct: 133 VGFIIGKGGETIKELSMKSGAYMEVERRDIDASSANRLFRIQGISNHIQLAKQLILEKVA 192
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
Q+ + IQ L +P + G IIG GG IK++ E S ++ V ++ +
Sbjct: 193 GVLVGQS--VCSVTSVGSIQSELWIPMDRVGVIIGIGGQTIKSLEEQSQTTIVVHNEKVN 250
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK--GATIPYRPLPQNAGGPGLIGNQFGM 179
E+ V I G P V A I I + P + AT+ Y P+ PGL+ +
Sbjct: 251 ALGEKLVTIVGKPQEVHIAEMLIQEI-IQKPSRVMNATL-YSPVMGQTTYPGLVSPELSY 308
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNA---AALAALASSQLKTNHMPR-- 234
+ P ++G+ G L A++ + +++ N + R
Sbjct: 309 LSRTSLRPMTNKTIFVPRKSIGMIIGKRGETIRDLQYRSGASIRVVPDNEVSVNTVERPI 368
Query: 235 ----NQNQNQNQHNRNNR-----------DGPSQKTNQQQNQITKEMTVPNELIGAVIGK 279
+ + HN N D KT I+ + +PN+ +G +IGK
Sbjct: 369 IVSGSLESVELAHNLINDIVNEGIERLGGDLSESKTLYPSASISLRIQIPNDKVGWLIGK 428
Query: 280 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
G+ I E+++ SGA I+++K S E D + R++T+TG P + +A+ LI
Sbjct: 429 SGSTIRELQQRSGARIQVAKPS--ETDIHTRSVTITGPPPFVEIAKQLI 475
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITK 58
K +G IIGK GET++ L+ SG+ I + + T ER + V GS++S+ A +LI
Sbjct: 327 KSIGMIIGKRGETIRDLQYRSGASIRVVPDNEVSVNTVERPIIVSGSLESVELAHNLIND 386
Query: 59 NIEEFHKNQNKHLGGN-GESQL------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
+ E + LGG+ ES+ I LR+ +P + G +IGK GS I+ +++ SGA
Sbjct: 387 IVNE----GIERLGGDLSESKTLYPSASISLRIQIPNDKVGWLIGKSGSTIRELQQRSGA 442
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-----LIMVDSPPKGATIPYRPLPQN 166
+ VA + R V I G P V A I M S IP+R L Q
Sbjct: 443 RIQVAKPSETDIHTRSVTITGPPPFVEIAKQLIAEKLAGYYMRQSGYPSMNIPHRRLEQE 502
Query: 167 AGGP 170
+ P
Sbjct: 503 SELP 506
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITK 503
K +G IIGK GET++ L+ SG+ I + + T ER + V GS++S+ A +LI
Sbjct: 327 KSIGMIIGKRGETIRDLQYRSGASIRVVPDNEVSVNTVERPIIVSGSLESVELAHNLIND 386
Query: 504 NIEEFHKNQNKHLGGN-GESQL------IQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
+ E + LGG+ ES+ I LR+ +P + G +IGK GS I+ +++ SGA
Sbjct: 387 IVNE----GIERLGGDLSESKTLYPSASISLRIQIPNDKVGWLIGKSGSTIRELQQRSGA 442
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-----LIMVDSPPKGATIPYRPLPQN 611
+ VA + R V I G P V A I M S IP+R L Q
Sbjct: 443 RIQVAKPSETDIHTRSVTITGPPPFVEIAKQLIAEKLAGYYMRQSGYPSMNIPHRRLEQE 502
Query: 612 AGGP 615
+ P
Sbjct: 503 SELP 506
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 264 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIAL 323
K + VP + IG +IGK G I +++ SGA IR+ +E ++ +R I ++G+ +++ L
Sbjct: 320 KTIFVPRKSIGMIIGKRGETIRDLQYRSGASIRVVPDNEVSVNTVERPIIVSGSLESVEL 379
Query: 324 AQYLIN 329
A LIN
Sbjct: 380 AHNLIN 385
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 709 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIAL 768
K + VP + IG +IGK G I +++ SGA IR+ +E ++ +R I ++G+ +++ L
Sbjct: 320 KTIFVPRKSIGMIIGKRGETIRDLQYRSGASIRVVPDNEVSVNTVERPIIVSGSLESVEL 379
Query: 769 AQYLIN 774
A LIN
Sbjct: 380 AHNLIN 385
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 155/352 (44%), Gaps = 83/352 (23%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVI--GSMDSLFRA 497
R + +G IIGKSG +K+L+++SG+KI I +S + +R++TVI G + S R
Sbjct: 58 FRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKVRV 117
Query: 498 FSL---ITKNIEEFHKNQNKHLGGNGESQLI----------QLRLIVPASQCGSIIGKGG 544
S +++ E + + L ES I R++ + Q GS+IGKGG
Sbjct: 118 ESEEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAGSVIGKGG 177
Query: 545 SQIKTIRETSGASVYVASDMLPNST---EREVNIKGVPDAVTQAIYQICLIM-----VDS 596
++ IR+ G + V +D LP E + I+G +V +A+ + + VD
Sbjct: 178 KVVEKIRKDCGVKIRVLTDKLPVCAGPNEEMIEIEGDILSVKKALIAVSRCLQDCQPVDK 237
Query: 597 PPKGAT-----IPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNS 651
P G++ +P PLP+ + + Q ++M P M N
Sbjct: 238 PRVGSSKYFEAVPQEPLPE-------MRVEIAPQRNIM-VPTMQN--------------- 274
Query: 652 GGGMGGGLNAAALAALASS-QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKE 710
NA + A + + L+T+ + PS Q ++ +
Sbjct: 275 --------NAVSCAPVPHNFLLETDRV------------------PSLDMKLFQQEVVFK 308
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
+ PN+++G VIGKGGT I ++ +GA I I + E S++R IT+ +
Sbjct: 309 ILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAE---SDERLITVIAS 357
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 153/347 (44%), Gaps = 83/347 (23%)
Query: 2 QGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVI--GSMDSLFRAFSL-- 55
+G IIGKSG +K+L+++SG+KI I +S + +R++TVI G + S R S
Sbjct: 63 HASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKVRVESEEV 122
Query: 56 -ITKNIEEFHKNQNKHLGGNGESQLI----------QLRLIVPASQCGSIIGKGGSQIKT 104
+++ E + + L ES I R++ + Q GS+IGKGG ++
Sbjct: 123 DVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAGSVIGKGGKVVEK 182
Query: 105 IRETSGASVYVASDMLPNST---EREVNIKGVPDAVTQAIYQICLIM-----VDSPPKGA 156
IR+ G + V +D LP E + I+G +V +A+ + + VD P G+
Sbjct: 183 IRKDCGVKIRVLTDKLPVCAGPNEEMIEIEGDILSVKKALIAVSRCLQDCQPVDKPRVGS 242
Query: 157 T-----IPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 211
+ +P PLP+ + + Q ++M P M N
Sbjct: 243 SKYFEAVPQEPLPE-------MRVEIAPQRNIM-VPTMQN-------------------- 274
Query: 212 GGLNAAALAALASS-QLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 270
NA + A + + L+T+ + PS Q ++ ++ PN
Sbjct: 275 ---NAVSCAPVPHNFLLETDRV------------------PSLDMKLFQQEVVFKILCPN 313
Query: 271 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
+++G VIGKGGT I ++ +GA I I + E S++R IT+ +
Sbjct: 314 DMVGGVIGKGGTIIKALQNETGASITIGATIAE---SDERLITVIAS 357
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 24/145 (16%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IGK G +K L+ E+G+ I I + + + ER++TVI S +
Sbjct: 316 VGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVIASENP--------------- 360
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDMLPN 122
++++ L+ RL+VP++Q G ++GKGG I +R+T+G S+ + A D LP
Sbjct: 361 ---ESRYSAAQKAVVLVFSRLVVPSNQVGCLLGKGGIIISDMRKTTGTSIKILAGDQLPK 417
Query: 123 ST---EREVNIKGVPDAVTQAIYQI 144
E+ V I G V A+Y +
Sbjct: 418 CVPENEQVVQISGDFMNVKDAVYHV 442
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 24/145 (16%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IGK G +K L+ E+G+ I I + + + ER++TVI S +
Sbjct: 316 VGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVIASENP--------------- 360
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDMLPN 567
++++ L+ RL+VP++Q G ++GKGG I +R+T+G S+ + A D LP
Sbjct: 361 ---ESRYSAAQKAVVLVFSRLVVPSNQVGCLLGKGGIIISDMRKTTGTSIKILAGDQLPK 417
Query: 568 ST---EREVNIKGVPDAVTQAIYQI 589
E+ V I G V A+Y +
Sbjct: 418 CVPENEQVVQISGDFMNVKDAVYHV 442
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+ VP +IG+V G+ + + +R+ISGA + + E S+DR I ++GTPD
Sbjct: 626 TVEIRVPENVIGSVYGENDSNLTRLRQISGAKVIV---HEPRLGSSDRIIVISGTPDETQ 682
Query: 323 LAQYLI 328
AQ L+
Sbjct: 683 AAQSLL 688
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+ VP +IG+V G+ + + +R+ISGA + + E S+DR I ++GTPD
Sbjct: 626 TVEIRVPENVIGSVYGENDSNLTRLRQISGAKVIV---HEPRLGSSDRIIVISGTPDETQ 682
Query: 768 LAQYLI 773
AQ L+
Sbjct: 683 AAQSLL 688
>gi|56759094|gb|AAW27687.1| SJCHGC08957 protein [Schistosoma japonicum]
Length = 412
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 9 IIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF----- 63
+IGK GE +KK+R + K+ I DS PERI+T+ G + ++ + +++
Sbjct: 1 MIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKDIMNAKL 60
Query: 64 ----------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+N++ + + +I R++V SQ GS+IG+GG +IK +R+
Sbjct: 61 SDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVIGRGGERIKDLRD 120
Query: 108 TSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
V ML P ST+R V + PD V Q + + + +PP+G Y
Sbjct: 121 KYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPRGRREDY 174
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 454 IIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF----- 508
+IGK GE +KK+R + K+ I DS PERI+T+ G + ++ + +++
Sbjct: 1 MIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKDIMNAKL 60
Query: 509 ----------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+N++ + + +I R++V SQ GS+IG+GG +IK +R+
Sbjct: 61 SDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVIGRGGERIKDLRD 120
Query: 553 TSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
V ML P ST+R V + PD V Q + + + +PP+G Y
Sbjct: 121 KYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAVIEAVESAPPRGRREDY 174
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 163/386 (42%), Gaps = 68/386 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG---------- 489
R I + VG IIGK G T++ L+ ++G+ + + D+ + ER++ +
Sbjct: 255 FRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISARENSEMMHSP 314
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+ D++ R +S I++ +S + RL+VP+ G ++GKGGS I
Sbjct: 315 AQDAVLRVYSRISE-------------ASMDKSSAVPARLLVPSQHIGCLLGKGGSIIAE 361
Query: 550 IRETSGASVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSP-PK 599
+R +GAS+ + ++ +P +R V + G ++ A+ I +I+ P P
Sbjct: 362 MRNVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIRDVIIPPKPHPS 421
Query: 600 GATIPYRPL--------------PQNAGG-PGLIGNQFGMQNSLMGAPDM------GNNP 638
G PY P P ++GG P + F N MG D+ G +P
Sbjct: 422 GGMSPYPPAGSTPHHPSRQDPAPPHHSGGMPPYPMHPF-RPNHPMGPFDVADHRPPGQHP 480
Query: 639 LAGLAALGLG------GNSGGGMGGGLNAAALAALASSQLKTNHMPRN-QNQNQNQHNRN 691
+ +G G GG L + A + +T PR+ ++ +R
Sbjct: 481 AHPMEHMGADRIPYSYGCEQGGPRPFLEQPSPRTWA-PEAQTADAPRSIPDKGLAMDSRK 539
Query: 692 NRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
S+ T E+ +P + IG + G G+ + EI+KISGA I + + +
Sbjct: 540 GSVAGSENQVATPTSTTTEVVIPCKYIGFICGTNGSDLAEIQKISGAAITV---HDPKPG 596
Query: 752 SNDRTITMTGTPDAIALAQYLINMSV 777
D ++ + G P+ AQ LI+ +
Sbjct: 597 DTDASVFVCGDPEQTKKAQSLIHAFI 622
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 160/377 (42%), Gaps = 68/377 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG----------SMDSLFRAF 53
VG IIGK G T++ L+ ++G+ + + D+ + ER++ + + D++ R +
Sbjct: 264 VGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISARENSEMMHSPAQDAVLRVY 323
Query: 54 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
S I++ +S + RL+VP+ G ++GKGGS I +R +GAS+
Sbjct: 324 SRISE-------------ASMDKSSAVPARLLVPSQHIGCLLGKGGSIIAEMRNVTGASI 370
Query: 114 YV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQIC-----LIMVDSP-PKGATIPYRPL 163
+ ++ +P +R V + G ++ A+ I +I+ P P G PY P
Sbjct: 371 RIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIRDVIIPPKPHPSGGMSPYPPA 430
Query: 164 --------------PQNAGG-PGLIGNQFGMQNSLMGAPDM------GNNPLAGLAALGL 202
P ++GG P + F N MG D+ G +P + +G
Sbjct: 431 GSTPHHPSRQDPAPPHHSGGMPPYPMHPF-RPNHPMGPFDVADHRPPGQHPAHPMEHMGA 489
Query: 203 G------GNSGGGMGGGLNAAALAALASSQLKTNHMPRN-QNQNQNQHNRNNRDGPSQKT 255
G GG L + A + +T PR+ ++ +R S+
Sbjct: 490 DRIPYSYGCEQGGPRPFLEQPSPRTWA-PEAQTADAPRSIPDKGLAMDSRKGSVAGSENQ 548
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
T E+ +P + IG + G G+ + EI+KISGA I + + + D ++ +
Sbjct: 549 VATPTSTTTEVVIPCKYIGFICGTNGSDLAEIQKISGAAITV---HDPKPGDTDASVFVC 605
Query: 316 GTPDAIALAQYLINMSV 332
G P+ AQ LI+ +
Sbjct: 606 GDPEQTKKAQSLIHAFI 622
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 57/190 (30%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTP-----ERIVTVIGSMDS 493
R + G +VG ++GK G+TV+++R+ESG++I + D P + ++ + GS +
Sbjct: 114 CRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNKDQVPPCALQGDELIHISGSFSA 173
Query: 494 LFRAFSLIT-------------------------------------------KNIEEFH- 509
+A L++ +I ++H
Sbjct: 174 ARKALLLVSTCLQDNPRLETSNFSTGRSFGPPGSGVGCPPGVDSHSQRSYLPPHIPDYHA 233
Query: 510 KNQNKHLGGNGESQLIQ----LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 565
+N + ++ G I+ R+I G IIGKGG+ I+ ++ +GASV V D +
Sbjct: 234 RNFSSNVAAPGPRFFIEQEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVI-DAV 292
Query: 566 PNSTEREVNI 575
+S ER + I
Sbjct: 293 ADSDERVIVI 302
>gi|367008424|ref|XP_003678712.1| hypothetical protein TDEL_0A01690 [Torulaspora delbrueckii]
gi|359746369|emb|CCE89501.1| hypothetical protein TDEL_0A01690 [Torulaspora delbrueckii]
Length = 430
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
Query: 386 KPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHI 445
K AL+ T L A+G + G S G G + + + +R +
Sbjct: 32 KRVALDDDTELPAVGNEDQRMNGDHSSPQDGEEEHLGS---HESIDGMDNSSRHVHLRML 88
Query: 446 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 503
K+ I+G GE + K++ + ++I +SD+ PER+V V GS +++ +AF +I +
Sbjct: 89 CLVKQASMIVGHKGENISKIKAVTSTRINVSDNVRGVPERVVYVRGSCENVAKAFGMIVR 148
Query: 504 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
+I + H + G +G S + + L++ G IIGK GS+++ I E S A + +
Sbjct: 149 SINDRHGEE----GYDGNSIMSTINLLISHHLMGCIIGKHGSRLREIEELSAARLSASPQ 204
Query: 564 MLPNSTEREVNIKGVPDAVTQAIY---QICLIMVDSPPKGATIPYRPLP 609
L S +R ++I GV DA+ A + Q + ++ I Y+P P
Sbjct: 205 QLIMSNDRILSITGVADAIHIATFYIGQTIMKCKEAFKSKKAIFYQPSP 253
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 9/166 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K+ I+G GE + K++ + ++I +SD+ PER+V V GS +++ +AF +I ++I
Sbjct: 92 KQASMIVGHKGENISKIKAVTSTRINVSDNVRGVPERVVYVRGSCENVAKAFGMIVRSIN 151
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ H + G +G S + + L++ G IIGK GS+++ I E S A + + L
Sbjct: 152 DRHGEE----GYDGNSIMSTINLLISHHLMGCIIGKHGSRLREIEELSAARLSASPQQLI 207
Query: 122 NSTEREVNIKGVPDAVTQAIY---QICLIMVDSPPKGATIPYRPLP 164
S +R ++I GV DA+ A + Q + ++ I Y+P P
Sbjct: 208 MSNDRILSITGVADAIHIATFYIGQTIMKCKEAFKSKKAIFYQPSP 253
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 52/275 (18%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T + + + L+G +IGK G+++ EI ++S A R+S S ++ SNDR +++TG DAI
Sbjct: 167 TINLLISHHLMGCIIGKHGSRLREIEELSAA--RLSASPQQLIMSNDRILSITGVADAIH 224
Query: 323 LAQYLINMSV----ELLRAN--------------LNG-EGGGESNMDDFSSDNNLPSSAP 363
+A + I ++ E ++ +NG GG S+ N +
Sbjct: 225 IATFYIGQTIMKCKEAFKSKKAIFYQPSPVYSVLVNGASHGGYSHQKHHQYHPNDKYTNS 284
Query: 364 LAG-------LNASNPLAAALPQL---AQILTKPGALNALTSLSALGGLSDLLGGGSSGG 413
AG + A+ P A LPQ +Q+ A TS + + ++
Sbjct: 285 RAGKRVVRPAMMATTPTAQPLPQENNGSQVTYTAAAAANATSFTPSFTIPNV-------- 336
Query: 414 GSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKI 473
P P QT + + +I + VG+IIGK G+ + ++E +G I
Sbjct: 337 ------RIIDEPAPP----AQTMAIIEQEVYIDENY-VGNIIGKEGKHINSIKEATGCSI 385
Query: 474 YISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 506
YI+D + ER +TV G+ A LI+ IE
Sbjct: 386 YIADPVEGSLERRLTVKGTSMGSQAAIMLISNKIE 420
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T + + + L+G +IGK G+++ EI ++S A R+S S ++ SNDR +++TG DAI
Sbjct: 167 TINLLISHHLMGCIIGKHGSRLREIEELSAA--RLSASPQQLIMSNDRILSITGVADAIH 224
Query: 768 LAQYLINMSV 777
+A + I ++
Sbjct: 225 IATFYIGQTI 234
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 132
+I+ + + + G+IIGK G I +I+E +G S+Y+A D + S ER + +KG
Sbjct: 351 IIEQEVYIDENYVGNIIGKEGKHINSIKEATGCSIYIA-DPVEGSLERRLTVKG 403
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 577
+I+ + + + G+IIGK G I +I+E +G S+Y+A D + S ER + +KG
Sbjct: 351 IIEQEVYIDENYVGNIIGKEGKHINSIKEATGCSIYIA-DPVEGSLERRLTVKG 403
>gi|308499839|ref|XP_003112105.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
gi|308268586|gb|EFP12539.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
Length = 721
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ K G+IIGK GE +K+LR E + + + DS+TPER+ TV ++ +
Sbjct: 374 VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILRDV 433
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+E+ E ++R+++ S G++IG+ G++IK +RE A + +
Sbjct: 434 LPRLED----------NFSERDPCEVRMLIHQSHAGALIGRNGTKIKELREKCSARLKIF 483
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P ST+R + G V I ++ + + P KG++ PY P
Sbjct: 484 TGCAPGSTDRVLITSGEQKNVLAIIEEVMKELKEIPIKGSSTPYLP 529
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ K G+IIGK GE +K+LR E + + + DS+TPER+ TV ++ + +
Sbjct: 378 VSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILRDVLPRL 437
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E+ E ++R+++ S G++IG+ G++IK +RE A + + +
Sbjct: 438 ED----------NFSERDPCEVRMLIHQSHAGALIGRNGTKIKELREKCSARLKIFTGCA 487
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P ST+R + G V I ++ + + P KG++ PY P
Sbjct: 488 PGSTDRVLITSGEQKNVLAIIEEVMKELKEIPIKGSSTPYLP 529
Score = 40.0 bits (92), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-TPERIVTVIGS 45
G+IIG+ GE + ++R+ESG++I + S+ PERI+T+ G+
Sbjct: 653 GTIIGRGGERIARIRQESGAQITLEPSTGQPERIITIKGT 692
Score = 40.0 bits (92), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-TPERIVTVIGS 490
G+IIG+ GE + ++R+ESG++I + S+ PERI+T+ G+
Sbjct: 653 GTIIGRGGERIARIRQESGAQITLEPSTGQPERIITIKGT 692
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 151/326 (46%), Gaps = 33/326 (10%)
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 313
KTN++ I ++ N L+G +IGK G + +I + +G I IS + + +RTIT
Sbjct: 264 KTNEE---IPLKILAHNSLVGRLIGKEGRNLKKIEEETGTKITISSLQDLTICNPERTIT 320
Query: 314 MTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPL 373
+ G+ +A A+ VE+++ E+ +D ++ N + P LNA
Sbjct: 321 VKGSLEACCKAE------VEIMKK------LKEAYENDIAAINQQANLIPGLNLNALGIF 368
Query: 374 AAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANI 433
++ LP L GA+ + G + L S G +P + +
Sbjct: 369 SSGLPVLPPAAGSRGAVPPMPP----AGYNPFLSHSSHLSGLYGVPPTSAIP----HQHS 420
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGS 490
Q Q + + + VG++IGK G+ +K+L +G+ I I+ + +P ER+V + G+
Sbjct: 421 QQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGT 480
Query: 491 MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTI 550
++ F+A I F K + ++ E ++ + VP+S G +IGKGG + +
Sbjct: 481 PEAQFKAQGRI------FGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNEL 534
Query: 551 RETSGASVYVASDMLPNSTEREVNIK 576
+ + A V V D +P+ + EV +K
Sbjct: 535 QNLTSAEVIVPRDQIPDEND-EVFVK 559
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG++IGK G+ +K+L +G+ I I+ + +P ER+V + G+ ++ F+A I
Sbjct: 438 VGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKAQGRI------ 491
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + ++ E ++ + VP+S G +IGKGG + ++ + A V V D +P+
Sbjct: 492 FGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQIPD 551
Query: 123 STEREVNIK 131
+ EV +K
Sbjct: 552 END-EVFVK 559
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + + A
Sbjct: 190 LRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSSAC 249
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I +I + N+ K N E I L+++ S G +IGK G +K I E +G +
Sbjct: 250 RMIL-DIMQKEANETK---TNEE---IPLKILAHNSLVGRLIGKEGRNLKKIEEETGTKI 302
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQI 589
++S D+ + ER + +KG +A +A +I
Sbjct: 303 TISSLQDLTICNPERTITVKGSLEACCKAEVEI 335
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD-----SSTPERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ EE+G+KI IS PER +TV GS+++ +A I K +
Sbjct: 280 VGRLIGKEGRNLKKIEEETGTKITISSLQDLTICNPERTITVKGSLEACCKAEVEIMKKL 339
Query: 61 EEFHKN 66
+E ++N
Sbjct: 340 KEAYEN 345
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 12/144 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + + A +I +I +
Sbjct: 199 VGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSSACRMIL-DIMQ 257
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
N+ K N E I L+++ S G +IGK G +K I E +G + ++S D+
Sbjct: 258 KEANETK---TNEE---IPLKILAHNSLVGRLIGKEGRNLKKIEEETGTKITISSLQDLT 311
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
+ ER + +KG +A +A +I
Sbjct: 312 ICNPERTITVKGSLEACCKAEVEI 335
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
P Q + Q Q + +P + +GA+IGK G I ++ +GA I+I+ + E D +R
Sbjct: 416 PHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPA--ESPDVTER 473
Query: 756 TITMTGTPDAIALAQ 770
+ +TGTP+A AQ
Sbjct: 474 MVIITGTPEAQFKAQ 488
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
+ L +P G++IGK G IK + +GAS+ +A P+ TER V I G P+A +A
Sbjct: 429 VYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKA 487
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+ L +P G++IGK G IK + +GAS+ +A P+ TER V I G P+A +A
Sbjct: 429 VYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKA 487
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 144/314 (45%), Gaps = 38/314 (12%)
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
N L+G +IGK G + +I + +G I IS + + +RTIT+ G+ DA A+ I
Sbjct: 288 NSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNPERTITVKGSIDACCKAEVEIT 347
Query: 330 MSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGA 389
+ E+ +D ++ N + P LNA ++ LP L P A
Sbjct: 348 KKLR------------EAYENDIAAINQQANLIPGLNLNALGIFSSGLPVL------PPA 389
Query: 390 LNALTSLSAL--GGLSDLLGGGSSGGGSGNSGGFGGVPQGPN--YANIQTTGVQRRMRHI 445
+++ A+ G + L S + G GVP + + Q Q +
Sbjct: 390 AGPRSAVPAVAPAGYNPFL------SHSSHLSGLYGVPPASAIPHQHSQQAPEQEVVYLF 443
Query: 446 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 502
+ + VG++IGK G+ +K+L +G+ I I+ + +P ER+V + G+ ++ F+A I
Sbjct: 444 IPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKAQGRI- 502
Query: 503 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 562
F K + ++ E ++ + VP+S G +IGKGG + ++ + A V V
Sbjct: 503 -----FGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPR 557
Query: 563 DMLPNSTEREVNIK 576
D P+ + EV +K
Sbjct: 558 DQTPDEND-EVFVK 570
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 161/366 (43%), Gaps = 61/366 (16%)
Query: 416 GNSGGFGG-VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIY 474
G SGG+G P+ ++ +R ++ + VG+IIGK G T+K + +++ SK+
Sbjct: 184 GPSGGYGSPRPRQHDFP----------LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVD 233
Query: 475 I---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIV 531
I ++ E+ +T+ + + A +I +I + N+ K ++ I L+++
Sbjct: 234 IHRKENAGAAEKPITIHSTPEGCSAACRMIL-DIMQKEANETK------TTEDIPLKILA 286
Query: 532 PASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQI 589
S G +IGK G +K I E +G + ++S D+ + ER + +KG DA +A +I
Sbjct: 287 HNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNPERTITVKGSIDACCKAEVEI 346
Query: 590 CLIMVDSPPKGATIPYRPLPQNAG-GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLG 648
+ ++ + Q A PGL N G+ +S + P + + A+
Sbjct: 347 TKKLREAYENDIAA----INQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAVPAVAPA 402
Query: 649 GN----SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ 704
G S GL A+ Q +++ P Q+
Sbjct: 403 GYNPFLSHSSHLSGLYGVPPASAIPHQ-------------------HSQQAPEQEVVY-- 441
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
+ +P + +GA+IGK G I ++ +GA I+I+ + E D +R + +TGTP+
Sbjct: 442 ------LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPA--ESPDVTERMVIITGTPE 493
Query: 765 AIALAQ 770
A AQ
Sbjct: 494 AQFKAQ 499
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 50/330 (15%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + + A +I +I +
Sbjct: 210 VGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSAACRMIL-DIMQ 268
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
N+ K ++ I L+++ S G +IGK G +K I E +G + ++S D+
Sbjct: 269 KEANETK------TTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLT 322
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG-GPGLIGNQFGM 179
+ ER + +KG DA +A +I + ++ + Q A PGL N G+
Sbjct: 323 IYNPERTITVKGSIDACCKAEVEITKKLREAYENDIAA----INQQANLIPGLNLNALGI 378
Query: 180 QNSLMGAPDMGNNPLAGLAALGLGGN----SGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+S + P + + A+ G S GL A+ Q
Sbjct: 379 FSSGLPVLPPAAGPRSAVPAVAPAGYNPFLSHSSHLSGLYGVPPASAIPHQ--------- 429
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
+++ P Q+ + +P + +GA+IGK G I ++ +GA I
Sbjct: 430 ----------HSQQAPEQEVVY--------LFIPTQAVGALIGKKGQHIKQLAHFAGASI 471
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+I+ + E D +R + +TGTP+A AQ
Sbjct: 472 KIAPA--ESPDVTERMVIITGTPEAQFKAQ 499
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG++IGK G+ +K+L +G+ I I+ + +P ER+V + G+ ++ F+A I
Sbjct: 449 VGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKAQGRI------ 502
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + ++ E ++ + VP+S G +IGKGG + ++ + A V V D P+
Sbjct: 503 FGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 562
Query: 123 STEREVNIK 131
+ EV +K
Sbjct: 563 END-EVFVK 570
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 139/343 (40%), Gaps = 74/343 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VGSIIG+ G+ +KK+ EE+ ++I I D T ER V V G
Sbjct: 180 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPP 239
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE------SQLIQLRLIVPASQCGSIIGKG 543
SMD L R I G +GE + + RL+VPASQ GS+IGK
Sbjct: 240 SMDGLLRVHMRIVD-------------GLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQ 286
Query: 544 GSQIKTIRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQIC----LIMVD 595
G +K I+E S V V S+ LP +R V + G P +V +A+ I +VD
Sbjct: 287 GGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFLVD 346
Query: 596 SPPKGATIPYRPLPQNAGGPGLIGNQF---GMQNSLMGAPDMGNNPLAGLAALGLGGNSG 652
+ IP+ NQ Q M AP P G A S
Sbjct: 347 R----SIIPF------------FENQMQKPTRQMDHMPAPHQAWGPPQGHAP------SV 384
Query: 653 GGMGGGLNAAALAALASSQLKTNHMP--RNQNQNQNQH---NRNNRDGP-----SQKTNQ 702
GG G G N P R + H + R+ P S
Sbjct: 385 GGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPM 444
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 745
Q+T++M +P AVIG G+ I R++SGA + I ++
Sbjct: 445 VAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQET 487
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 136/337 (40%), Gaps = 74/337 (21%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLF 50
++VGSIIG+ G+ +KK+ EE+ ++I I D T ER V V G SMD L
Sbjct: 186 AQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLL 245
Query: 51 RAFSLITKNIEEFHKNQNKHLGGNGE------SQLIQLRLIVPASQCGSIIGKGGSQIKT 104
R I G +GE + + RL+VPASQ GS+IGK G +K
Sbjct: 246 RVHMRIVD-------------GLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTVKA 292
Query: 105 IRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQIC----LIMVDSPPKGA 156
I+E S V V S+ LP +R V + G P +V +A+ I +VD +
Sbjct: 293 IQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFLVDR----S 348
Query: 157 TIPYRPLPQNAGGPGLIGNQF---GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 213
IP+ NQ Q M AP P G A S GG G G
Sbjct: 349 IIPF------------FENQMQKPTRQMDHMPAPHQAWGPPQGHAP------SVGGGGYG 390
Query: 214 LNAAALAALASSQLKTNHMP--RNQNQNQNQH---NRNNRDGP-----SQKTNQQQNQIT 263
N P R + H + R+ P S Q+T
Sbjct: 391 HNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVT 450
Query: 264 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
++M +P AVIG G+ I R++SGA + I ++
Sbjct: 451 QQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQET 487
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 132
R++VPA + GSIIG+ G IK I E + A + + D P +TER V + G
Sbjct: 180 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL-DGPPGTTERAVMVSG 229
>gi|149236405|ref|XP_001524080.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452456|gb|EDK46712.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 399
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 15/179 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
R ++ KE G +IG++G + +R E+ +K IS + T ERI+TV G +D +A S
Sbjct: 126 YRVLVSAKEAGCLIGQNGGVIDSIRNETNTKAGISRLTPGTHERILTVSGKLDDSAKALS 185
Query: 500 -----LITKNIEEFHKNQNKHLGGN----GESQLIQLRLIVPASQCGSIIGKGGSQIKTI 550
L IE ++ K L GE+ +I RL++P SQ G++IG G++I+ I
Sbjct: 186 YFAQALCDSAIELYNYFPLKQLSSTPCVEGETTII--RLLIPNSQMGTLIGSKGARIQQI 243
Query: 551 RETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 607
+++ G S+ + LP S ER V ++G D + ++ I CLI S G T Y P
Sbjct: 244 QQSFGVSMIASKLFLPGSNERLVELQGTVDDLYDSLRVISRCLIEDFSSSVGTTTYYVP 302
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 15/175 (8%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS---- 54
+ KE G +IG++G + +R E+ +K IS + T ERI+TV G +D +A S
Sbjct: 130 VSAKEAGCLIGQNGGVIDSIRNETNTKAGISRLTPGTHERILTVSGKLDDSAKALSYFAQ 189
Query: 55 -LITKNIEEFHKNQNKHLGGN----GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
L IE ++ K L GE+ +I RL++P SQ G++IG G++I+ I+++
Sbjct: 190 ALCDSAIELYNYFPLKQLSSTPCVEGETTII--RLLIPNSQMGTLIGSKGARIQQIQQSF 247
Query: 110 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 162
G S+ + LP S ER V ++G D + ++ I CLI S G T Y P
Sbjct: 248 GVSMIASKLFLPGSNERLVELQGTVDDLYDSLRVISRCLIEDFSSSVGTTTYYVP 302
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 313
+++Q + T + PN+++GA+IGK G++I +RK+SGAMI I SE E+ S++R T
Sbjct: 303 RSHQMTRKSTATINFPNDMVGALIGKNGSRIQGVRKVSGAMIGI---SEAEDGSDERVFT 359
Query: 314 MTGTPDAIALAQYLINMSVE 333
+TGT A+ A+ L+ ++E
Sbjct: 360 ITGTQQAVEKAKGLLYHNLE 379
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 699 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 758
+++Q + T + PN+++GA+IGK G++I +RK+SGAMI I SE E+ S++R T
Sbjct: 303 RSHQMTRKSTATINFPNDMVGALIGKNGSRIQGVRKVSGAMIGI---SEAEDGSDERVFT 359
Query: 759 MTGTPDAIALAQYLINMSVE 778
+TGT A+ A+ L+ ++E
Sbjct: 360 ITGTQQAVEKAKGLLYHNLE 379
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESG-----SKIYISDSSTPERIVTVIGSMDSLFR 496
+R ++ ++G++IG G ++++++ G SK+++ S+ ER+V + G++D L+
Sbjct: 220 IRLLIPNSQMGTLIGSKGARIQQIQQSFGVSMIASKLFLPGSN--ERLVELQGTVDDLYD 277
Query: 497 AFSLITKN-IEEFHKNQNKHLGGNGESQLIQLR----LIVPASQCGSIIGKGGSQIKTIR 551
+ +I++ IE+F + S + + + P G++IGK GS+I+ +R
Sbjct: 278 SLRVISRCLIEDFSSSVGTTTYYVPRSHQMTRKSTATINFPNDMVGALIGKNGSRIQGVR 337
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+ SGA + + S+ S ER I G AV +A
Sbjct: 338 KVSGAMIGI-SEAEDGSDERVFTITGTQQAVEKA 370
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Query: 5 EVGSIIGKSGETVKKLREESG-----SKIYISDSSTPERIVTVIGSMDSLFRAFSLITKN 59
++G++IG G ++++++ G SK+++ S+ ER+V + G++D L+ + +I++
Sbjct: 228 QMGTLIGSKGARIQQIQQSFGVSMIASKLFLPGSN--ERLVELQGTVDDLYDSLRVISRC 285
Query: 60 -IEEFHKNQNKHLGGNGESQLIQLR----LIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
IE+F + S + + + P G++IGK GS+I+ +R+ SGA +
Sbjct: 286 LIEDFSSSVGTTTYYVPRSHQMTRKSTATINFPNDMVGALIGKNGSRIQGVRKVSGAMIG 345
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQA 140
+ S+ S ER I G AV +A
Sbjct: 346 I-SEAEDGSDERVFTITGTQQAVEKA 370
>gi|197260143|gb|ACH56617.1| poly (rC) binding protein 2-like protein [Ambystoma mexicanum]
Length = 139
Score = 80.1 bits (196), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 110 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
GA V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P +A
Sbjct: 1 GAQVQVAGDMLPNSTERAITIAGIPASIIECVKQICVVMLESPPKGVTIPYRPKPSSA 58
Score = 80.1 bits (196), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 555 GASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 612
GA V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P +A
Sbjct: 1 GAQVQVAGDMLPNSTERAITIAGIPASIIECVKQICVVMLESPPKGVTIPYRPKPSSA 58
>gi|427797377|gb|JAA64140.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp, partial
[Rhipicephalus pulchellus]
Length = 303
Score = 80.1 bits (196), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 34 STPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGS 93
S RI++++ +D+L I +++ +H G NG S+ ++RL++ S G
Sbjct: 46 SCDPRILSIVADLDTLGEILLNIIPKLDDRSMQFAQHTGQNGGSE-SEMRLLMHQSHAGC 104
Query: 94 IIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
IIG+ G +IK +RE++GA++ V P STER V + G P V I QIC I+ +P
Sbjct: 105 IIGRAGCRIKELRESTGANIKVHGSCCPGSTERIVKVTGSPSVVVDCIKQICDIVGVAPI 164
Query: 154 KGATIPYRP 162
KG PY P
Sbjct: 165 KGLNKPYDP 173
Score = 80.1 bits (196), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Query: 479 STPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGS 538
S RI++++ +D+L I +++ +H G NG S+ ++RL++ S G
Sbjct: 46 SCDPRILSIVADLDTLGEILLNIIPKLDDRSMQFAQHTGQNGGSE-SEMRLLMHQSHAGC 104
Query: 539 IIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
IIG+ G +IK +RE++GA++ V P STER V + G P V I QIC I+ +P
Sbjct: 105 IIGRAGCRIKELRESTGANIKVHGSCCPGSTERIVKVTGSPSVVVDCIKQICDIVGVAPI 164
Query: 599 KGATIPYRP 607
KG PY P
Sbjct: 165 KGLNKPYDP 173
Score = 45.1 bits (105), Expect = 0.21, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGS 490
Q G + MR +M G IIG++G +K+LRE +G+ I + S P ERIV V GS
Sbjct: 85 QNGGSESEMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGSCCPGSTERIVKVTGS 144
>gi|195336152|ref|XP_002034707.1| GM22026 [Drosophila sechellia]
gi|194126677|gb|EDW48720.1| GM22026 [Drosophila sechellia]
Length = 345
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 125
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 126 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKN 511
G++IGK G+ ++K+R + + + + DS PER + + ++S + + K EE ++
Sbjct: 35 GAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDED 94
Query: 512 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPNSTE 570
+RL++ S G +IGKGG +IK IR+ G + V S++ P ST+
Sbjct: 95 -------------FDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 141
Query: 571 REVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
R V G V +A+ ++ + D+P KGA Y P+
Sbjct: 142 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPM 179
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 140/349 (40%), Gaps = 89/349 (25%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
R ++ ++VG+IIG+ GE +KK+ EE+ ++I I D PER V +I + D S
Sbjct: 123 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAV-MISAKDEPDAPLS 181
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQ--------LRLIVPASQCGSIIGKGGSQIKTIR 551
+ HK NGES +Q RL+VP+SQ GS+IGK G+ IK+I+
Sbjct: 182 PAVDGLLRVHKRITD--SSNGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 239
Query: 552 ETSGASVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQI------------CLIMVDSP 597
++S + V + ++ P + +R V I+G P V +A+ I L + ++
Sbjct: 240 DSSKSVVRIVENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKFLVDRSVLPLFETH 299
Query: 598 PKGATIPYR---PLPQNAGGPGLI---------------GNQF---GMQNSLMGAPD--- 633
K +P P PQ+ G P QF Q+S PD
Sbjct: 300 MKMHGMPREQPVPPPQHWGPPQTWGPPPNIPPGGPGFGGNPQFIPPRPQDSYYPTPDAPA 359
Query: 634 MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNR 693
M P G++A G G G
Sbjct: 360 MEKQPHYGISAYGREAPPSGASATG----------------------------------- 384
Query: 694 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 742
+Q + +Q+T M +P AVIG G I IR+ SGA + I
Sbjct: 385 ---NQPLSHAGSQVTHNMHIPLNYADAVIGAAGASISYIRRHSGATVTI 430
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 137/343 (39%), Gaps = 89/343 (25%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI 60
++VG+IIG+ GE +KK+ EE+ ++I I D PER V +I + D S +
Sbjct: 129 AQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAV-MISAKDEPDAPLSPAVDGL 187
Query: 61 EEFHKNQNKHLGGNGESQLIQ--------LRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
HK NGES +Q RL+VP+SQ GS+IGK G+ IK+I+++S +
Sbjct: 188 LRVHKRITD--SSNGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSV 245
Query: 113 VYVASDMLPNS--TEREVNIKGVPDAVTQAIYQI------------CLIMVDSPPKGATI 158
V + ++ P + +R V I+G P V +A+ I L + ++ K +
Sbjct: 246 VRIVENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKFLVDRSVLPLFETHMKMHGM 305
Query: 159 PYR---PLPQNAGGPGLI---------------GNQF---GMQNSLMGAPD---MGNNPL 194
P P PQ+ G P QF Q+S PD M P
Sbjct: 306 PREQPVPPPQHWGPPQTWGPPPNIPPGGPGFGGNPQFIPPRPQDSYYPTPDAPAMEKQPH 365
Query: 195 AGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK 254
G++A G G G +Q
Sbjct: 366 YGISAYGREAPPSGASATG--------------------------------------NQP 387
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ +Q+T M +P AVIG G I IR+ SGA + I
Sbjct: 388 LSHAGSQVTHNMHIPLNYADAVIGAAGASISYIRRHSGATVTI 430
>gi|238883031|gb|EEQ46669.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 365
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 153/341 (44%), Gaps = 73/341 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
R ++ KE G +IG +G+ + +R E+ +K IS + ERI+TV G +D +A S
Sbjct: 71 YRVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSGKLDDCAKALS 130
Query: 500 -----LITKNIEEFHKNQNKHLGG--NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
LI NIE ++ K L N E I LRL++P SQ G++IG G++I+ ++
Sbjct: 131 YFAQALINANIESYNYFPLKQLSSTPNTEETTI-LRLLIPNSQMGTLIGSKGARIQQLQN 189
Query: 553 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 612
S+ + LP S ER V ++G VD I R L ++
Sbjct: 190 NFNISMIASKSFLPGSNERLVELQGT---------------VDDLYDSLRIISRCLIEDF 234
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
++G + + GN+ +S
Sbjct: 235 SS--IVGTTYYVPR----------------------GNT---------------YNNSHS 255
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
+++ N N N N + + N+ T ++ PN+++GA+IGK G++I +
Sbjct: 256 HSHNNNNNTNTNNNNN------NNNNTHGSGGNKTTDTISFPNDIVGALIGKRGSRIDGV 309
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
RK+SGAMI IS++ E E N+R T+TG+ A+ A+ +I
Sbjct: 310 RKVSGAMIAISEAIEGE---NERVFTITGSSHAVDKAKQMI 347
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS---- 54
+ KE G +IG +G+ + +R E+ +K IS + ERI+TV G +D +A S
Sbjct: 75 VSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSGKLDDCAKALSYFAQ 134
Query: 55 -LITKNIEEFHKNQNKHLGG--NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
LI NIE ++ K L N E I LRL++P SQ G++IG G++I+ ++
Sbjct: 135 ALINANIESYNYFPLKQLSSTPNTEETTI-LRLLIPNSQMGTLIGSKGARIQQLQNNFNI 193
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 162
S+ + LP S ER V ++G D + ++ I CLI S G T Y P
Sbjct: 194 SMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIEDFSSIVGTTY-YVP 245
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+ T ++ PN+++GA+IGK G++I +RK+SGAMI IS++ E E N+R T+TG+ A
Sbjct: 283 KTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEAIEGE---NERVFTITGSSHA 339
Query: 321 IALAQYLI 328
+ A+ +I
Sbjct: 340 VDKAKQMI 347
>gi|324512087|gb|ADY45016.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 515
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK GET+K+L ESG+KI D +TP+R + G+ + + +A I++ I
Sbjct: 235 VGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELIFY 294
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
H VPA++ G +IGKGG IK I SGA V ++ + PN
Sbjct: 295 MH---------------------VPANKTGLVIGKGGETIKQICAESGAHVELSREPPPN 333
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
S E+ IKG P + A + I + + D P
Sbjct: 334 SYEKVFIIKGTPYQIHHAQHIIRIKVGDISP 364
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK GET+K+L ESG+KI D +TP+R + G+ + + +A I++ I
Sbjct: 235 VGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELIFY 294
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
H VPA++ G +IGKGG IK I SGA V ++ + PN
Sbjct: 295 MH---------------------VPANKTGLVIGKGGETIKQICAESGAHVELSREPPPN 333
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
S E+ IKG P + A + I + + D P
Sbjct: 334 SYEKVFIIKGTPYQIHHAQHIIRIKVGDISP 364
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+ GE + +++ +S ++ +S S R T+ G+ ++ RA S+I I
Sbjct: 43 VGLVIGRGGEQISQIQSQSNCRVQMSPESDGNNMRQCTLQGTKMAVERAKSMIQDVIARA 102
Query: 64 ----HKNQNKHLGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
N+ GG +G + I +++P ++CG +IGKGG IK I+E +G + + +
Sbjct: 103 GNRPPPNRGHFDGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQE 162
Query: 119 MLPNSTE-REVNIKGVPDAVTQA---IYQICLIMVDSPP 153
+ + + + I G PD V A + I D PP
Sbjct: 163 TQESGGQPKPLRIIGEPDKVDTARRMVEDILQSREDHPP 201
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+ GE + +++ +S ++ +S S R T+ G+ ++ RA S+I I
Sbjct: 43 VGLVIGRGGEQISQIQSQSNCRVQMSPESDGNNMRQCTLQGTKMAVERAKSMIQDVIARA 102
Query: 509 ----HKNQNKHLGG-NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
N+ GG +G + I +++P ++CG +IGKGG IK I+E +G + + +
Sbjct: 103 GNRPPPNRGHFDGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQE 162
Query: 564 MLPNSTE-REVNIKGVPDAVTQA---IYQICLIMVDSPP 598
+ + + + I G PD V A + I D PP
Sbjct: 163 TQESGGQPKPLRIIGEPDKVDTARRMVEDILQSREDHPP 201
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS-------TPERIVTVIGSMDSLFRAFSL 55
G + G +IGK GET+K ++E++G K+ + + P RI+ +D+ R
Sbjct: 132 GAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQPKPLRIIGEPDKVDTARRMVED 191
Query: 56 ITKNIEEF--------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
I ++ E+ + + G G Q +IVP + G IIGKGG IK +
Sbjct: 192 ILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEVIVPRASVGMIIGKGGETIKRLAA 251
Query: 108 TSGASVYVASDMLPNSTEREVNIKGVPDAV---TQAIYQICLIM 148
SGA + D + +R I+G + + TQ I ++ M
Sbjct: 252 ESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELIFYM 295
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 254 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 313
K Q +++ M VP G VIGKGG I +I SGA + +S+ E +S ++
Sbjct: 283 KATQFISELIFYMHVPANKTGLVIGKGGETIKQICAESGAHVELSR--EPPPNSYEKVFI 340
Query: 314 MTGTPDAIALAQYLINMSV 332
+ GTP I AQ++I + V
Sbjct: 341 IKGTPYQIHHAQHIIRIKV 359
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 699 KTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT 758
K Q +++ M VP G VIGKGG I +I SGA + +S+ E +S ++
Sbjct: 283 KATQFISELIFYMHVPANKTGLVIGKGGETIKQICAESGAHVELSR--EPPPNSYEKVFI 340
Query: 759 MTGTPDAIALAQYLINMSV 777
+ GTP I AQ++I + V
Sbjct: 341 IKGTPYQIHHAQHIIRIKV 359
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP +G +IGKGG I + SGA I+ +E++ + DR + GT + IA A
Sbjct: 227 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 284
Query: 325 QYLINMSVELLRANLNGEG-----GGES 347
I+ + + N G GGE+
Sbjct: 285 TQFISELIFYMHVPANKTGLVIGKGGET 312
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP +G +IGKGG I + SGA I+ +E++ + DR + GT + IA A
Sbjct: 227 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 284
Query: 770 QYLINMSVELLRANLNGEG-----GGES 792
I+ + + N G GGE+
Sbjct: 285 TQFISELIFYMHVPANKTGLVIGKGGET 312
>gi|402594179|gb|EJW88105.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 581
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 14/157 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK GET+K+L ESG+KI D + ER + G+ + + +A I++ +
Sbjct: 234 VGMIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAVIQGTAEQIAKATQFISELV-- 291
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 292 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 343
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 159
++E+ IKG P + A + I + + D P G +P
Sbjct: 344 ASEKVFIIKGTPYQIHHAQHIIRIKVGDIAP-GTPVP 379
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 14/157 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK GET+K+L ESG+KI D + ER + G+ + + +A I++ +
Sbjct: 234 VGMIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAVIQGTAEQIAKATQFISELV-- 291
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 292 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 343
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 604
++E+ IKG P + A + I + + D P G +P
Sbjct: 344 ASEKVFIIKGTPYQIHHAQHIIRIKVGDIAP-GTPVP 379
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 65/358 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
+G++IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 46 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 105
Query: 64 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 115
N+ H G G + I + +P ++CG +IGKGG IK I+E +G V +
Sbjct: 106 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 165
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 172
+ + + I G P+ V A + +I D PP P G G+
Sbjct: 166 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFP--------GSFGI 217
Query: 173 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
G Q + ++ +G +G GG + + A + A Q K +
Sbjct: 218 SGGQRSIGEVIVPRASVG-------MIIGKGGET-------IKRLAAESGAKIQFKPD-- 261
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK------------------EMTVPNELIG 274
+ R Q T +Q + T+ M VP+ G
Sbjct: 262 --------DDQTAQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 313
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ++I + V
Sbjct: 314 LVIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQHIIRIKV 369
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 65/358 (18%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 508
+G++IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 46 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 105
Query: 509 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 560
N+ H G G + I + +P ++CG +IGKGG IK I+E +G V +
Sbjct: 106 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 165
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ + + I G P+ V A + +I D PP P G G+
Sbjct: 166 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFP--------GSFGI 217
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G Q + ++ +G +G GG + + A + A Q K +
Sbjct: 218 SGGQRSIGEVIVPRASVG-------MIIGKGGET-------IKRLAAESGAKIQFKPD-- 261
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK------------------EMTVPNELIG 719
+ R Q T +Q + T+ M VP+ G
Sbjct: 262 --------DDQTAQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 313
Query: 720 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ++I + V
Sbjct: 314 LVIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQHIIRIKV 369
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 422 GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI----SD 477
GG+P G TG Q + G + G +IGK GET+K ++E++G K+ + +
Sbjct: 119 GGIPVG--------TGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQE 170
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE-----SQLIQLRLIVP 532
S + + + G + + A ++ + ++ + H G G Q +IVP
Sbjct: 171 SGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFPGSFGISGGQRSIGEVIVP 230
Query: 533 ASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-L 591
+ G IIGKGG IK + SGA + D + ER I+G + + +A I L
Sbjct: 231 RASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAVIQGTAEQIAKATQFISEL 290
Query: 592 IMVDSPPKGATIPYRPLPQNAGG 614
+ GA + Y +P N G
Sbjct: 291 VKKSGAAGGAEMFYMHVPSNKTG 313
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITK 58
G + G +IGK GET+K ++E++G K+ + +S + + + G + + A ++ +
Sbjct: 137 GAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITGDPEKVENARRMVEE 196
Query: 59 NIEEFHKNQNKHLGGNGE-----SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
++ + H G G Q +IVP + G IIGKGG IK + SGA +
Sbjct: 197 ILQSREDHPPGHFGFPGSFGISGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKI 256
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGATIPYRPLPQNAGG 169
D + ER I+G + + +A I L+ GA + Y +P N G
Sbjct: 257 QFKPDDDQTAQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 313
>gi|170573376|ref|XP_001892446.1| KH domain containing protein [Brugia malayi]
gi|158602012|gb|EDP38733.1| KH domain containing protein [Brugia malayi]
Length = 579
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 14/157 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK GET+K+L ESG+KI D + ER + G+ + + +A I++ +
Sbjct: 232 VGMIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAVIQGTAEQIAKATQFISELV-- 289
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 290 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 341
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 159
++E+ IKG P + A + I + + D P G +P
Sbjct: 342 ASEKVFIIKGTPYQIHHAQHIIRIKVGDIAP-GTPVP 377
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 14/157 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK GET+K+L ESG+KI D + ER + G+ + + +A I++ +
Sbjct: 232 VGMIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAVIQGTAEQIAKATQFISELV-- 289
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 290 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 341
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 604
++E+ IKG P + A + I + + D P G +P
Sbjct: 342 ASEKVFIIKGTPYQIHHAQHIIRIKVGDIAP-GTPVP 377
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 148/358 (41%), Gaps = 65/358 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 44 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 103
Query: 64 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 115
N+ H G G + I + +P ++CG +IGKGG IK I+E +G V +
Sbjct: 104 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 163
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 172
+ + + I G P+ V A + +I D PP P G G+
Sbjct: 164 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFP--------GSFGI 215
Query: 173 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
G Q + ++ +G +G GG + + A + A Q K +
Sbjct: 216 SGGQRSIGEVIVPRASVG-------MIIGKGGET-------IKRLAAESGAKIQFKPD-- 259
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK------------------EMTVPNELIG 274
+ R Q T +Q + T+ M VP+ G
Sbjct: 260 --------DDQTAQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 311
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ++I + V
Sbjct: 312 LVIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQHIIRIKV 367
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 148/358 (41%), Gaps = 65/358 (18%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 44 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 103
Query: 509 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 560
N+ H G G + I + +P ++CG +IGKGG IK I+E +G V +
Sbjct: 104 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 163
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ + + I G P+ V A + +I D PP P G G+
Sbjct: 164 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFP--------GSFGI 215
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G Q + ++ +G +G GG + + A + A Q K +
Sbjct: 216 SGGQRSIGEVIVPRASVG-------MIIGKGGET-------IKRLAAESGAKIQFKPD-- 259
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK------------------EMTVPNELIG 719
+ R Q T +Q + T+ M VP+ G
Sbjct: 260 --------DDQTAQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 311
Query: 720 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ++I + V
Sbjct: 312 LVIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQHIIRIKV 367
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITK 58
G + G +IGK GET+K ++E++G K+ + +S + + + G + + A ++ +
Sbjct: 135 GAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITGDPEKVENARRMVEE 194
Query: 59 NIEEFHKNQNKHLGGNGE-----SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
++ + H G G Q +IVP + G IIGKGG IK + SGA +
Sbjct: 195 ILQSREDHPPGHFGFPGSFGISGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKI 254
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGATIPYRPLPQNAGG 169
D + ER I+G + + +A I L+ GA + Y +P N G
Sbjct: 255 QFKPDDDQTAQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 311
>gi|401838485|gb|EJT42099.1| PBP2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 416
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 166/367 (45%), Gaps = 40/367 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
+R + K I+G G T+ +++ E+ ++I +S++ PERI+ V G+ D + +A+
Sbjct: 72 LRMLCLVKHASLIVGHKGATISRIKSETSARINVSNNIRGVPERIIYVRGTCDDVAKAYG 131
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+I + + + E + + L++P G IIGK GS+++ I + S A ++
Sbjct: 132 MIVRALL-----EEHENESEEEDIEVSINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLF 186
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIY---QICL-IMVDSPPK--GATIPYRPLPQNAG 613
+ + L S +R + I GVPDA+ A + Q L ++SP K +I Y+P N+
Sbjct: 187 ASPNQLLLSNDRILTINGVPDAIHIATFYVGQTLLNFQIESPQKKLKRSIFYQPTQFNS- 245
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 673
+ N+++ + +P L L N + ++ L ++A Q
Sbjct: 246 ----VLLDHSQSNAVLHQRNHQYHPNDKL--LSCRPNRKFSV-----SSTLLSMAPPQYT 294
Query: 674 TNHMPRNQNQNQNQHNRNNR--------DGPSQKTNQQQNQITKEMTVPNELIGAVIGKG 725
T + + N N R GPS + N +E+ + +G VIGK
Sbjct: 295 TASVANATAFHPNFVIPNVRILDAPVIDQGPSNHLS--MNLFQQEIFIDENFVGNVIGKD 352
Query: 726 GTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 785
G I +++ +G I + S E S++R +++ GT A A LI+ +E+ R LN
Sbjct: 353 GKHINSVKESTGCSIIVQDSV---EGSSERRLSIRGTFMASQAAIMLISNKIEIDR--LN 407
Query: 786 GEGGGES 792
E S
Sbjct: 408 AERKRRS 414
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 163/360 (45%), Gaps = 40/360 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K I+G G T+ +++ E+ ++I +S++ PERI+ V G+ D + +A+ +I + +
Sbjct: 79 KHASLIVGHKGATISRIKSETSARINVSNNIRGVPERIIYVRGTCDDVAKAYGMIVRALL 138
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+ E + + L++P G IIGK GS+++ I + S A ++ + + L
Sbjct: 139 -----EEHENESEEEDIEVSINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL 193
Query: 122 NSTEREVNIKGVPDAVTQAIY---QICL-IMVDSPPK--GATIPYRPLPQNAGGPGLIGN 175
S +R + I GVPDA+ A + Q L ++SP K +I Y+P N+ +
Sbjct: 194 LSNDRILTINGVPDAIHIATFYVGQTLLNFQIESPQKKLKRSIFYQPTQFNS-----VLL 248
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
N+++ + +P L L N + ++ L ++A Q T +
Sbjct: 249 DHSQSNAVLHQRNHQYHPNDKL--LSCRPNRKFSV-----SSTLLSMAPPQYTTASVANA 301
Query: 236 QNQNQNQHNRNNR--------DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+ N N R GPS + N +E+ + +G VIGK G I +
Sbjct: 302 TAFHPNFVIPNVRILDAPVIDQGPSNHLS--MNLFQQEIFIDENFVGNVIGKDGKHINSV 359
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 347
++ +G I + S E S++R +++ GT A A LI+ +E+ R LN E S
Sbjct: 360 KESTGCSIIVQDSV---EGSSERRLSIRGTFMASQAAIMLISNKIEIDR--LNAERKRRS 414
>gi|339236169|ref|XP_003379639.1| putative KH domain protein [Trichinella spiralis]
gi|316977680|gb|EFV60751.1| putative KH domain protein [Trichinella spiralis]
Length = 614
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLI 501
I+ VGSIIG+ GET+++L ESG++I D + PER + G+M+ + RA +I
Sbjct: 294 IVPKHAVGSIIGRGGETIRRLTSESGARIQFKIGEDHNAPERTAVISGTMEQIDRATRMI 353
Query: 502 TKNI--------EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
T + EE + G + + + VPA++ G +IGKGG IK I
Sbjct: 354 TDLVNKSASVLLEESAYDCCNFEGCDSDI----FYMHVPANKTGLVIGKGGETIKQINMD 409
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
SGA V ++ + PN E+ I+G P + A + I
Sbjct: 410 SGARVELSRETAPNDWEKVFVIRGTPYQINHATHLI 445
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNI-- 60
VGSIIG+ GET+++L ESG++I D + PER + G+M+ + RA +IT +
Sbjct: 300 VGSIIGRGGETIRRLTSESGARIQFKIGEDHNAPERTAVISGTMEQIDRATRMITDLVNK 359
Query: 61 ------EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
EE + G + + + VPA++ G +IGKGG IK I SGA V
Sbjct: 360 SASVLLEESAYDCCNFEGCDSDI----FYMHVPANKTGLVIGKGGETIKQINMDSGARVE 415
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
++ + PN E+ I+G P + A + I
Sbjct: 416 LSRETAPNDWEKVFVIRGTPYQINHATHLI 445
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTPE---RIVTVIGSMDSLFRAFSL 500
+ G + G +IGK GET+K L+E +G K + I +S+ P + + +IG + + A L
Sbjct: 207 FIPGTKCGLVIGKGGETIKSLQERAGVKMVMIQESNQPSGLPKPLRIIGEPNKVEYAKQL 266
Query: 501 ITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
I + + H + N++ S+ I +IVP GSIIG+GG I+ + SGA +
Sbjct: 267 IEEIMNSKH-DMNEYGSLTDASKKIG-EVIVPKHAVGSIIGRGGETIRRLTSESGARIQF 324
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
N+ ER I G + + +A I
Sbjct: 325 KIGEDHNAPERTAVISGTMEQIDRATRMI 353
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSK-IYISDSSTPE---RIVTVIGSMDSLFRAFSLITK 58
G + G +IGK GET+K L+E +G K + I +S+ P + + +IG + + A LI +
Sbjct: 210 GTKCGLVIGKGGETIKSLQERAGVKMVMIQESNQPSGLPKPLRIIGEPNKVEYAKQLIEE 269
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ H + N++ S+ I +IVP GSIIG+GG I+ + SGA +
Sbjct: 270 IMNSKH-DMNEYGSLTDASKKIG-EVIVPKHAVGSIIGRGGETIRRLTSESGARIQFKIG 327
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQI 144
N+ ER I G + + +A I
Sbjct: 328 EDHNAPERTAVISGTMEQIDRATRMI 353
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 26/169 (15%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS------TPERIVTVIGSMDSLFRA----FSL 55
VG IIG+ GE++ +++ ESG ++ +S + P R T+ G S+ +A S+
Sbjct: 103 VGLIIGRGGESINQIQSESGCRVQMSQTPPFDVNGKPMRGCTLTGPSSSVEKAKQMISSI 162
Query: 56 ITKNIEEFHKNQNKHL-GGNGESQL--------------IQLRLIVPASQCGSIIGKGGS 100
+TK E ++ + + G NG S L I + +P ++CG +IGKGG
Sbjct: 163 VTKAGETMSLSRGQPVYGSNGPSVLYSSSGSGAAGSDKTITTEMFIPGTKCGLVIGKGGE 222
Query: 101 QIKTIRETSGAS-VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIM 148
IK+++E +G V + P+ + + I G P+ V A I IM
Sbjct: 223 TIKSLQERAGVKMVMIQESNQPSGLPKPLRIIGEPNKVEYAKQLIEEIM 271
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 26/169 (15%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS------TPERIVTVIGSMDSLFRA----FSL 500
VG IIG+ GE++ +++ ESG ++ +S + P R T+ G S+ +A S+
Sbjct: 103 VGLIIGRGGESINQIQSESGCRVQMSQTPPFDVNGKPMRGCTLTGPSSSVEKAKQMISSI 162
Query: 501 ITKNIEEFHKNQNKHL-GGNGESQL--------------IQLRLIVPASQCGSIIGKGGS 545
+TK E ++ + + G NG S L I + +P ++CG +IGKGG
Sbjct: 163 VTKAGETMSLSRGQPVYGSNGPSVLYSSSGSGAAGSDKTITTEMFIPGTKCGLVIGKGGE 222
Query: 546 QIKTIRETSGAS-VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIM 593
IK+++E +G V + P+ + + I G P+ V A I IM
Sbjct: 223 TIKSLQERAGVKMVMIQESNQPSGLPKPLRIIGEPNKVEYAKQLIEEIM 271
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
M VP G VIGKGG I +I SGA + +S+ E + ++ + GTP I A
Sbjct: 385 MHVPANKTGLVIGKGGETIKQINMDSGARVELSR--ETAPNDWEKVFVIRGTPYQINHAT 442
Query: 326 YLINMSV 332
+LI + V
Sbjct: 443 HLIRIKV 449
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
M VP G VIGKGG I +I SGA + +S+ E + ++ + GTP I A
Sbjct: 385 MHVPANKTGLVIGKGGETIKQINMDSGARVELSR--ETAPNDWEKVFVIRGTPYQINHAT 442
Query: 771 YLINMSV 777
+LI + V
Sbjct: 443 HLIRIKV 449
>gi|432848278|ref|XP_004066266.1| PREDICTED: far upstream element-binding protein 2-like [Oryzias
latipes]
Length = 584
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 10/138 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG IIG+ GE + K++ ESG K+ I+ S PER +++ GS+D++ RA +LI + +
Sbjct: 112 VGLIIGRGGEQINKIQHESGCKVQIAHDSAGLPERSISLTGSLDAIQRARALIDEIVSRG 171
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-MLPN 122
H+ N G E +I+PA + G IIGKGG IK ++E +G + + D P
Sbjct: 172 HEPSNGQQGSMQE-------MIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPP 224
Query: 123 STEREVNIKGVPDAVTQA 140
+ ++ + I G P V QA
Sbjct: 225 NVDKPLRIIGDPYKVQQA 242
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 10/138 (7%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG IIG+ GE + K++ ESG K+ I+ S PER +++ GS+D++ RA +LI + +
Sbjct: 112 VGLIIGRGGEQINKIQHESGCKVQIAHDSAGLPERSISLTGSLDAIQRARALIDEIVSRG 171
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-MLPN 567
H+ N G E +I+PA + G IIGKGG IK ++E +G + + D P
Sbjct: 172 HEPSNGQQGSMQE-------MIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPP 224
Query: 568 STEREVNIKGVPDAVTQA 585
+ ++ + I G P V QA
Sbjct: 225 NVDKPLRIIGDPYKVQQA 242
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 28/160 (17%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G KI D + PE+I ++G D A S+I ++
Sbjct: 282 VGVVIGRNGEMIKKIQNDAGVKIQFKPDDGTAPEKIAHIMGPPDQCQHAVSIINDLLQSI 341
Query: 64 HKNQNKHLGGNGE----SQLI-------------------QLRLIVPASQCGSIIGKGGS 100
+ + GG G SQ + ++ +PA +CG +IG+GG
Sbjct: 342 ---RARDEGGQGADPPASQGMSPGGRGWGRGQGSWGPPGGEMTFSIPAHKCGIVIGRGGE 398
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
IK+I + +GA V V + + I+G P + A
Sbjct: 399 NIKSISQQTGAFVEVCRQPNGDPNFKLFTIRGSPQEIDHA 438
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 28/160 (17%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G KI D + PE+I ++G D A S+I ++
Sbjct: 282 VGVVIGRNGEMIKKIQNDAGVKIQFKPDDGTAPEKIAHIMGPPDQCQHAVSIINDLLQSI 341
Query: 509 HKNQNKHLGGNGE----SQLI-------------------QLRLIVPASQCGSIIGKGGS 545
+ + GG G SQ + ++ +PA +CG +IG+GG
Sbjct: 342 ---RARDEGGQGADPPASQGMSPGGRGWGRGQGSWGPPGGEMTFSIPAHKCGIVIGRGGE 398
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
IK+I + +GA V V + + I+G P + A
Sbjct: 399 NIKSISQQTGAFVEVCRQPNGDPNFKLFTIRGSPQEIDHA 438
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSL 500
I+ + G IIGK GET+K+L+E +G K I I D S P ++ + +IG + +A +
Sbjct: 186 IIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPNVDKPLRIIGDPYKVQQAKEM 245
Query: 501 ITKNIEEF-------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
+ + + E +GG G + + VP G +IG+ G IK I+
Sbjct: 246 VNEILRERDHAGFGDRSEYGSRMGGGG------IEIPVPRQSVGVVIGRNGEMIKKIQND 299
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 586
+G + D + E+ +I G PD A+
Sbjct: 300 AGVKIQFKPD-DGTAPEKIAHIMGPPDQCQHAV 331
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 5 EVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNI 60
+ G IIGK GET+K+L+E +G K I I D S P ++ + +IG + +A ++ + +
Sbjct: 191 KAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPNVDKPLRIIGDPYKVQQAKEMVNEIL 250
Query: 61 EEF-------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E +GG G + + VP G +IG+ G IK I+ +G +
Sbjct: 251 RERDHAGFGDRSEYGSRMGGGG------IEIPVPRQSVGVVIGRNGEMIKKIQNDAGVKI 304
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAI 141
D + E+ +I G PD A+
Sbjct: 305 QFKPD-DGTAPEKIAHIMGPPDQCQHAV 331
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+ +E VP+ ++G +IG+GG +I +I+ SG ++I+ S +R+I++TG+ DAI
Sbjct: 101 MMEECKVPDSMVGLIIGRGGEQINKIQHESGCKVQIAHDS---AGLPERSISLTGSLDAI 157
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNM 349
A+ LI+ V NG+ G M
Sbjct: 158 QRARALIDEIVSRGHEPSNGQQGSMQEM 185
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+ +E VP+ ++G +IG+GG +I +I+ SG ++I+ S +R+I++TG+ DAI
Sbjct: 101 MMEECKVPDSMVGLIIGRGGEQINKIQHESGCKVQIAHDS---AGLPERSISLTGSLDAI 157
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNM 794
A+ LI+ V NG+ G M
Sbjct: 158 QRARALIDEIVSRGHEPSNGQQGSMQEM 185
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP S G IIG+GG QI I+ SG V +A D LP ER +++ G DA+ +A
Sbjct: 107 VPDSMVGLIIGRGGEQINKIQHESGCKVQIAHDSAGLP---ERSISLTGSLDAIQRA 160
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 585
VP S G IIG+GG QI I+ SG V +A D LP ER +++ G DA+ +A
Sbjct: 107 VPDSMVGLIIGRGGEQINKIQHESGCKVQIAHDSAGLP---ERSISLTGSLDAIQRA 160
>gi|125559909|gb|EAZ05357.1| hypothetical protein OsI_27561 [Oryza sativa Indica Group]
gi|125601956|gb|EAZ41281.1| hypothetical protein OsJ_25788 [Oryza sativa Japonica Group]
Length = 700
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 12/140 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKN 59
+VG +IGKSGET++ L+ SG+KI I+ D++ P R V ++G+++S+ +A LI
Sbjct: 162 KVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLESIDKAERLIKNV 221
Query: 60 IEEFHKNQNKHL----GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
I E + L G+G+S Q ++VP ++ G IIGKGG IKT++ SGA + +
Sbjct: 222 IAEADAGGSPALIARGFGSGQSGSEQFEMLVPDNKVGLIIGKGGETIKTLQTRSGARIQL 281
Query: 116 ASDMLPNS---TEREVNIKG 132
P TER V I G
Sbjct: 282 IPQHPPEGVTLTERTVRITG 301
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 12/140 (8%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKN 504
+VG +IGKSGET++ L+ SG+KI I+ D++ P R V ++G+++S+ +A LI
Sbjct: 162 KVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLESIDKAERLIKNV 221
Query: 505 IEEFHKNQNKHL----GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
I E + L G+G+S Q ++VP ++ G IIGKGG IKT++ SGA + +
Sbjct: 222 IAEADAGGSPALIARGFGSGQSGSEQFEMLVPDNKVGLIIGKGGETIKTLQTRSGARIQL 281
Query: 561 ASDMLPNS---TEREVNIKG 577
P TER V I G
Sbjct: 282 IPQHPPEGVTLTERTVRITG 301
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+ ++ + VPN +G +IGK G I ++ SGA I+I+K +E + ++ R++ + GT ++
Sbjct: 151 ETSRIINVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLES 210
Query: 321 IALAQYLINMSVELLRAN------LNGEGGGESNMDDFS---SDNNL 358
I A+ LI + A G G G+S + F DN +
Sbjct: 211 IDKAERLIKNVIAEADAGGSPALIARGFGSGQSGSEQFEMLVPDNKV 257
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
+ ++ + VPN +G +IGK G I ++ SGA I+I+K +E + ++ R++ + GT ++
Sbjct: 151 ETSRIINVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLES 210
Query: 766 IALAQYLINMSVELLRAN------LNGEGGGESNMDDFS---SDNNL 803
I A+ LI + A G G G+S + F DN +
Sbjct: 211 IDKAERLIKNVIAEADAGGSPALIARGFGSGQSGSEQFEMLVPDNKV 257
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIR-ISKSSEEEEDSNDRTITMTGTPDAIAL 323
EM VP+ +G +IGKGG I ++ SGA I+ I + E +RT+ +TG I
Sbjct: 249 EMLVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLTERTVRITGNKKQIEA 308
Query: 324 AQYLIN--MSVELLRANLNGEGGGESNM 349
A+ +I MS R G G+ N
Sbjct: 309 AKDMIKQAMSQTFSRHGAQSGGYGQQNY 336
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIR-ISKSSEEEEDSNDRTITMTGTPDAIAL 768
EM VP+ +G +IGKGG I ++ SGA I+ I + E +RT+ +TG I
Sbjct: 249 EMLVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLTERTVRITGNKKQIEA 308
Query: 769 AQYLIN--MSVELLRANLNGEGGGESNM 794
A+ +I MS R G G+ N
Sbjct: 309 AKDMIKQAMSQTFSRHGAQSGGYGQQNY 336
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISDSSTP------ERIVTVIGSMDSLFRAFSLITK 503
+VG IIGK GET+K L+ SG++I + P ER V + G+ + A +I +
Sbjct: 256 KVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLTERTVRITGNKKQIEAAKDMIKQ 315
Query: 504 NIEEFHKNQNKHLGGNGE 521
+ + GG G+
Sbjct: 316 AMSQTFSRHGAQSGGYGQ 333
>gi|402862105|ref|XP_003895410.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Papio anubis]
Length = 123
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 47 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 103
Query: 323 LAQYLIN 329
LAQYLIN
Sbjct: 104 LAQYLIN 110
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 47 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 103
Query: 768 LAQYLIN 774
LAQYLIN
Sbjct: 104 LAQYLIN 110
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I G P ++ A Y
Sbjct: 49 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISLAQY 107
Query: 143 QI 144
I
Sbjct: 108 LI 109
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I G P ++ A Y
Sbjct: 49 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISLAQY 107
Query: 588 QI 589
I
Sbjct: 108 LI 109
>gi|12239354|gb|AAG49443.1|AF141340_1 LYST-interacting protein LIP4 [Homo sapiens]
Length = 276
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
++E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IA
Sbjct: 86 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIA 142
Query: 323 LAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
LAQYLI +E ++ GG S+ +D P S PL L + P
Sbjct: 143 LAQYLITACLETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 186
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
++E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IA
Sbjct: 86 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIA 142
Query: 768 LAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
LAQYLI +E ++ GG S+ +D P S PL L + P
Sbjct: 143 LAQYLITACLETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 186
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 160/360 (44%), Gaps = 66/360 (18%)
Query: 421 FGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS- 479
FGG+P Q+ +R ++Q VG+IIG+ G T++++ +++ +++ +
Sbjct: 118 FGGLPG-------QSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDN 170
Query: 480 --TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
+ E+ +T+ G+ ++ A I + +++ N NK + I L+++ + G
Sbjct: 171 VGSLEKAITIYGNPENCTNACKRILEVMQQEANNTNKGYAKKYYYE-ICLKILAHNNLIG 229
Query: 538 SIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
IIGKGG+ IK I + + + V+S D+ + ER + +KG D +++A QI +
Sbjct: 230 RIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGAIDNMSRAEAQISAKLRQ 289
Query: 596 SPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
S PQ PGL +P+A +A G+G S G
Sbjct: 290 SYENDLQ---AMAPQTMMFPGL-------------------HPMAMMATAGIGYGSRGLY 327
Query: 656 GGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
G + ++Q G SQ+T + +PN
Sbjct: 328 TGQAPYPGMYPAGAAQ---------------------GGGDSQETTY--------LYIPN 358
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE--EEDSNDRTITMTGTPDAIALAQYLI 773
+GA+IG G+ I I + SGA ++I+ E +E N+R +T+ G+P+A AQYLI
Sbjct: 359 NAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLI 418
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 150/335 (44%), Gaps = 59/335 (17%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAFSLIT 57
+Q VG+IIG+ G T++++ +++ +++ + + E+ +T+ G+ ++ A I
Sbjct: 136 VQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPENCTNACKRIL 195
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
+ +++ N NK + I L+++ + G IIGKGG+ IK I + + + V+S
Sbjct: 196 EVMQQEANNTNKGYAKKYYYE-ICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSS 254
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG D +++A QI + S PQ PGL
Sbjct: 255 INDINSFNLERIITVKGAIDNMSRAEAQISAKLRQSYENDLQ---AMAPQTMMFPGL--- 308
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+P+A +A G+G S G G + ++Q
Sbjct: 309 ----------------HPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQ--------- 343
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
G SQ+T + +PN +GA+IG G+ I I + SGA +
Sbjct: 344 ------------GGGDSQETTY--------LYIPNNAVGAIIGTKGSHIRNIIRFSGASV 383
Query: 296 RISKSSEE--EEDSNDRTITMTGTPDAIALAQYLI 328
+I+ E +E N+R +T+ G+P+A AQYLI
Sbjct: 384 KIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLI 418
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 150/338 (44%), Gaps = 64/338 (18%)
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
TN R Q + N N+ G ++K +I ++ N LIG +IGKGG I I
Sbjct: 188 TNACKRILEVMQQEANNTNK-GYAKK---YYYEICLKILAHNNLIGRIIGKGGNTIKRIM 243
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESN 348
+ + I +S ++ + +R IT+ G D NMS E +
Sbjct: 244 QETDTKITVSSINDINSFNLERIITVKGAID---------NMS--------RAEAQISAK 286
Query: 349 MDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGG 408
+ S +N+L + AP Q + PG L+ + ++ G +G
Sbjct: 287 LRQ-SYENDLQAMAP------------------QTMMFPG-LHPMAMMATAG-----IGY 321
Query: 409 GSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHI-MQGKEVGSIIGKSGETVKKLRE 467
GS G +G + G P G Q G + ++ + VG+IIG G ++ +
Sbjct: 322 GSRGLYTGQAPYPGMYPAGAA----QGGGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIR 377
Query: 468 ESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNG 520
SG+ + I+ D + P ER VT++GS ++ ++A LI + + E + G+
Sbjct: 378 FSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLIFEKMRE-----EGFVAGSD 432
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+ +L + ++VP+SQ G IIGKGG ++ ++ +G+ +
Sbjct: 433 DVRL-TVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVI 469
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 13/115 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ D + P ER VT++GS ++ ++A LI +
Sbjct: 361 VGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLIFE 420
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
+ E + G+ + +L + ++VP+SQ G IIGKGG ++ ++ +G+ +
Sbjct: 421 KMRE-----EGFVAGSDDVRL-TVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVI 469
>gi|170574714|ref|XP_001892930.1| KH domain containing protein [Brugia malayi]
gi|158601280|gb|EDP38236.1| KH domain containing protein [Brugia malayi]
Length = 614
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 14/157 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS---DSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK GET+K+L ESG+KI D + ER + G+ + + +A I++ +
Sbjct: 270 VGMIIGKGGETIKRLAAESGAKIQFKPDNDQTAQERCAVIQGTAEQIAKATQFISELV-- 327
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 328 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 379
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 159
++E+ IKG P + A + I + + D P G +P
Sbjct: 380 ASEKVFIIKGTPYQIHHAQHIIRIKVGDIAP-GTPVP 415
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 14/157 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYIS---DSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK GET+K+L ESG+KI D + ER + G+ + + +A I++ +
Sbjct: 270 VGMIIGKGGETIKRLAAESGAKIQFKPDNDQTAQERCAVIQGTAEQIAKATQFISELV-- 327
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
K G G +++ + VP+++ G +IGKGG IK I SGA V ++ D PN
Sbjct: 328 ------KKSGAAGGAEMFYMH--VPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPN 379
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 604
++E+ IKG P + A + I + + D P G +P
Sbjct: 380 ASEKVFIIKGTPYQIHHAQHIIRIKVGDIAP-GTPVP 415
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 149/358 (41%), Gaps = 65/358 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 63
+G++IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 82 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNVRQCTLQGSKMSVDRARAMINEVIARA 141
Query: 64 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 115
N+ H G G + I + +P ++CG +IGKGG IK I+E +G V +
Sbjct: 142 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 201
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 172
+ + + I G P+ V A + +I D PP P G G+
Sbjct: 202 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFP--------GSFGM 253
Query: 173 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
G Q + ++ +G +G GG + + A + A Q K +
Sbjct: 254 SGGQRSIGEVIVPRASVG-------MIIGKGGET-------IKRLAAESGAKIQFKPD-- 297
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK------------------EMTVPNELIG 274
N R Q T +Q + T+ M VP+ G
Sbjct: 298 --------NDQTAQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 349
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ++I + V
Sbjct: 350 LVIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQHIIRIKV 405
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 149/358 (41%), Gaps = 65/358 (18%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEF 508
+G++IG+ GE + +++ ++ ++ +S S R T+ GS S+ RA ++I + I
Sbjct: 82 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNVRQCTLQGSKMSVDRARAMINEVIARA 141
Query: 509 ----HKNQNKHLGGN---GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYV 560
N+ H G G + I + +P ++CG +IGKGG IK I+E +G V +
Sbjct: 142 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 201
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQA---IYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
+ + + I G P+ V A + +I D PP P G G+
Sbjct: 202 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFP--------GSFGM 253
Query: 618 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 677
G Q + ++ +G +G GG + + A + A Q K +
Sbjct: 254 SGGQRSIGEVIVPRASVG-------MIIGKGGET-------IKRLAAESGAKIQFKPD-- 297
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK------------------EMTVPNELIG 719
N R Q T +Q + T+ M VP+ G
Sbjct: 298 --------NDQTAQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 349
Query: 720 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
VIGKGG I +I SGA + +S+ + +++++ + GTP I AQ++I + V
Sbjct: 350 LVIGKGGETIKQICAESGAHVELSR--DPPPNASEKVFIIKGTPYQIHHAQHIIRIKV 405
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 418 SGGF-GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI- 475
+G F GG+P G TG Q + G + G +IGK GET+K ++E++G K+ +
Sbjct: 150 AGHFDGGIPVG--------TGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 201
Query: 476 ---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE-----SQLIQL 527
+S + + + G + + A ++ + ++ + H G G Q
Sbjct: 202 QENQESGGQPKPLRITGDPEKVENARRMVEEILQSREDHPPGHFGFPGSFGMSGGQRSIG 261
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
+IVP + G IIGKGG IK + SGA + D + ER I+G + + +A
Sbjct: 262 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDNDQTAQERCAVIQGTAEQIAKATQ 321
Query: 588 QIC-LIMVDSPPKGATIPYRPLPQNAGG 614
I L+ GA + Y +P N G
Sbjct: 322 FISELVKKSGAAGGAEMFYMHVPSNKTG 349
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITK 58
G + G +IGK GET+K ++E++G K+ + +S + + + G + + A ++ +
Sbjct: 173 GAKCGLVIGKGGETIKNIQEQTGVKMVMIQENQESGGQPKPLRITGDPEKVENARRMVEE 232
Query: 59 NIEEFHKNQNKHLGGNGE-----SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
++ + H G G Q +IVP + G IIGKGG IK + SGA +
Sbjct: 233 ILQSREDHPPGHFGFPGSFGMSGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKI 292
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGATIPYRPLPQNAGG 169
D + ER I+G + + +A I L+ GA + Y +P N G
Sbjct: 293 QFKPDNDQTAQERCAVIQGTAEQIAKATQFISELVKKSGAAGGAEMFYMHVPSNKTG 349
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 42/315 (13%)
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
N IG +IGK G + +I + +G I IS + +N+RTIT+ G+ +A N
Sbjct: 286 NNYIGRLIGKQGRNLKKIEEETGTKITISSLQDLNIYNNERTITVKGSLEACC------N 339
Query: 330 MSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGA 389
VE+++ E+ +D ++ N S P LNA ++ LP L+
Sbjct: 340 AEVEIMKK------LREAYENDIAAINQQTSLIPGLNLNALGIFSSTLPVLS-------- 385
Query: 390 LNALTSLSALGGLSDLLGGGSSG-----GGSGNSGGFGGVPQGPNYANIQTTGVQRRMRH 444
A G S + G +G G S + GVP + Q
Sbjct: 386 -------PAAGPRSTMPPVGPAGYNPFLGHSSHLSSLYGVPPASAIPHQHAAQEQEVAYL 438
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLI 501
+ + VG++IGK G+ +K+L +G+ I ++ + P ER+V + G+ ++ F+A I
Sbjct: 439 FIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMVIITGTPEAQFKAQGRI 498
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
F K + +++ E ++ + VP++ G +IGKGG + ++ + A V V
Sbjct: 499 ------FGKLKEENIFTGKEEVRLETHIKVPSTAAGRVIGKGGKTVNELQSLTSAEVIVP 552
Query: 562 SDMLPNSTEREVNIK 576
D P+ + EV +K
Sbjct: 553 RDQTPDE-KNEVVVK 566
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 154/338 (45%), Gaps = 44/338 (13%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLF 495
Q+ +R I+ + VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + +
Sbjct: 196 QQDLRIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 255
Query: 496 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
A +I + I + N+ K + + I L++I + G +IGK G +K I E +G
Sbjct: 256 AACRMIME-IMQKEANETKAM------EDIPLKIIASNNYIGRLIGKQGRNLKKIEEETG 308
Query: 556 ASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAG 613
+ ++S D+ + ER + +KG +A A +I + ++ + Q +
Sbjct: 309 TKITISSLQDLNIYNNERTITVKGSLEACCNAEVEIMKKLREAYENDIAAINQ---QTSL 365
Query: 614 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGG-NSGGGMGGGLNAAALAALASSQL 672
PGL N G+ +S + P + + +G G N G L++ AS+
Sbjct: 366 IPGLNLNALGIFSSTLPVLSPAAGPRSTMPPVGPAGYNPFLGHSSHLSSLYGVPPASA-- 423
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
P Q Q+Q + +P + +GA+IGK G I ++
Sbjct: 424 ----------------------IPHQHAAQEQE--VAYLFIPTQAVGALIGKKGQHIKQL 459
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+GA I+++ + E D+ +R + +TGTP+A AQ
Sbjct: 460 AHFAGASIKVAPA--EMPDATERMVIITGTPEAQFKAQ 495
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 147/326 (45%), Gaps = 44/326 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + + A +I + I +
Sbjct: 208 VGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSAACRMIME-IMQ 266
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
N+ K + + I L++I + G +IGK G +K I E +G + ++S D+
Sbjct: 267 KEANETKAM------EDIPLKIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQDLN 320
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
+ ER + +KG +A A +I + ++ + Q + PGL N G+
Sbjct: 321 IYNNERTITVKGSLEACCNAEVEIMKKLREAYENDIAAINQ---QTSLIPGLNLNALGIF 377
Query: 181 NSLMGAPDMGNNPLAGLAALGLGG-NSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
+S + P + + +G G N G L++ AS+
Sbjct: 378 SSTLPVLSPAAGPRSTMPPVGPAGYNPFLGHSSHLSSLYGVPPASA-------------- 423
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
P Q Q+Q + +P + +GA+IGK G I ++ +GA I+++
Sbjct: 424 ----------IPHQHAAQEQE--VAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAP 471
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQ 325
+ E D+ +R + +TGTP+A AQ
Sbjct: 472 A--EMPDATERMVIITGTPEAQFKAQ 495
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG++IGK G+ +K+L +G+ I ++ + P ER+V + G+ ++ F+A I
Sbjct: 445 VGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMVIITGTPEAQFKAQGRI------ 498
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + +++ E ++ + VP++ G +IGKGG + ++ + A V V D P+
Sbjct: 499 FGKLKEENIFTGKEEVRLETHIKVPSTAAGRVIGKGGKTVNELQSLTSAEVIVPRDQTPD 558
Query: 123 STEREVNIK 131
+ EV +K
Sbjct: 559 E-KNEVVVK 566
>gi|380800003|gb|AFE71877.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 151
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 89/196 (45%), Gaps = 51/196 (26%)
Query: 151 SPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGG 209
SPPKG TIPYRP P ++ G + +Q + PD
Sbjct: 2 SPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD--------------------- 40
Query: 210 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVP 269
L L ++ +H P N D +Q T+ E+T+P
Sbjct: 41 ---------LTKLHQLAMQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIP 81
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
N+LIG +IG+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN
Sbjct: 82 NDLIGCIIGRQGAKINEIRQMSGAQIKIAN---PVEGSTDRQVTITGSAASISLAQYLIN 138
Query: 330 MSVELLRANLNGEGGG 345
+ L+ E GG
Sbjct: 139 V-------RLSSETGG 147
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 89/196 (45%), Gaps = 51/196 (26%)
Query: 596 SPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGG 654
SPPKG TIPYRP P ++ G + +Q + PD
Sbjct: 2 SPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPD--------------------- 40
Query: 655 MGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVP 714
L L ++ +H P N D +Q T+ E+T+P
Sbjct: 41 ---------LTKLHQLAMQQSHFPMTHG---NTGFSAGLDASAQTTSH-------ELTIP 81
Query: 715 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
N+LIG +IG+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN
Sbjct: 82 NDLIGCIIGRQGAKINEIRQMSGAQIKIAN---PVEGSTDRQVTITGSAASISLAQYLIN 138
Query: 775 MSVELLRANLNGEGGG 790
+ L+ E GG
Sbjct: 139 V-------RLSSETGG 147
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
H N G + +Q L +P G IIG+ G++I IR+ SGA + +A + + S
Sbjct: 58 HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA-NPVEGS 116
Query: 124 TEREVNIKGVPDAVTQAIYQI 144
T+R+V I G +++ A Y I
Sbjct: 117 TDRQVTITGSAASISLAQYLI 137
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
H N G + +Q L +P G IIG+ G++I IR+ SGA + +A + + S
Sbjct: 58 HGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA-NPVEGS 116
Query: 569 TEREVNIKGVPDAVTQAIYQI 589
T+R+V I G +++ A Y I
Sbjct: 117 TDRQVTITGSAASISLAQYLI 137
>gi|308465473|ref|XP_003094996.1| hypothetical protein CRE_23697 [Caenorhabditis remanei]
gi|308246261|gb|EFO90213.1| hypothetical protein CRE_23697 [Caenorhabditis remanei]
Length = 580
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEEF 63
G IIGK GE +K+L E+G+KI + P +R+ ++G+ D ++RA IT+ +
Sbjct: 252 GMIIGKGGEMIKRLAMETGTKIQFKPDANPNSEDRVAVIMGTRDQIYRATERITEIVNRA 311
Query: 64 HKN----QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV-YVASD 118
KN LGGN + VPA++CG +IGKGG IK I SGAS A+
Sbjct: 312 IKNGQAGSGSILGGNNILGQSTFYMHVPATKCGLVIGKGGENIKQIERDSGASCGLAAAS 371
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
N E+ IKG + A + + + + + P P PLP
Sbjct: 372 EQKNEDEKVFEIKGTQYQIHHASHLVKIKVGEIAP---NTPVPPLP 414
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEEF 508
G IIGK GE +K+L E+G+KI + P +R+ ++G+ D ++RA IT+ +
Sbjct: 252 GMIIGKGGEMIKRLAMETGTKIQFKPDANPNSEDRVAVIMGTRDQIYRATERITEIVNRA 311
Query: 509 HKN----QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV-YVASD 563
KN LGGN + VPA++CG +IGKGG IK I SGAS A+
Sbjct: 312 IKNGQAGSGSILGGNNILGQSTFYMHVPATKCGLVIGKGGENIKQIERDSGASCGLAAAS 371
Query: 564 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
N E+ IKG + A + + + + + P P PLP
Sbjct: 372 EQKNEDEKVFEIKGTQYQIHHASHLVKIKVGEIAP---NTPVPPLP 414
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSKI--YISDSSTPE---RIVTVIGSMDSLFRAFSLITK- 58
++G +IGK G+T++ L+++SG ++ + DSS+ + + ++G+ ++ A +L+
Sbjct: 151 KIGLVIGKGGDTIRTLQDQSGLRLLNVVQDSSSATGQPKPLRMVGTPAAIETAKALVHNI 210
Query: 59 ------NIEEFHKNQNKHLGGNGESQLIQLR--LIVPASQCGSIIGKGGSQIKTIRETSG 110
N + G G + + +IVP G IIGKGG IK + +G
Sbjct: 211 MNSSPGNPPLLPRGGQSSGGQYGGYGGQEAKGEVIVPRVSAGMIIGKGGEMIKRLAMETG 270
Query: 111 ASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIM 148
+ D PNS +R I G D + +A +I I+
Sbjct: 271 TKIQFKPDANPNSEDRVAVIMGTRDQIYRATERITEIV 308
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 696 PSQKTNQ-------QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
P++KT++ ++I + VP +++G VIGKGG++I I++ SG R+ +
Sbjct: 35 PAKKTSEIGDLNMGDTDKIIEIYQVPEKVVGLVIGKGGSEIRLIQQTSGC--RVQMDPDH 92
Query: 749 EEDSNDRTITMTGTPDAIALAQYLI 773
+ + R T+ G PD +A+A+ +I
Sbjct: 93 QSVNGIRNCTIEGPPDQVAIAKQMI 117
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYIS---DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
K VG +IGK G ++ +++ SG ++ + S R T+ G D + A +IT+
Sbjct: 62 KVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGIRNCTIEGPPDQVAIAKQMITQCF 121
Query: 61 -EEFHKNQN--KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV--YV 115
+ +NQ GE + +++PA + G +IGKGG I+T+++ SG + V
Sbjct: 122 FQVISRNQTGVPQTVATGE---VTEEMLIPADKIGLVIGKGGDTIRTLQDQSGLRLLNVV 178
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
+ + + G P A+ A + IM SP
Sbjct: 179 QDSSSATGQPKPLRMVGTPAAIETAKALVHNIMNSSP 215
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAV-------T 138
VP G +IGKGGS+I+ I++TSG V + D + R I+G PD V T
Sbjct: 59 VPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGIRNCTIEGPPDQVAIAKQMIT 118
Query: 139 QAIYQI 144
Q +Q+
Sbjct: 119 QCFFQV 124
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
++T+EM +P + IG VIGKGG I ++ SG + + + M GTP A
Sbjct: 140 EVTEEMLIPADKIGLVIGKGGDTIRTLQDQSGLRLLNVVQDSSSATGQPKPLRMVGTPAA 199
Query: 321 IALAQYLIN 329
I A+ L++
Sbjct: 200 IETAKALVH 208
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
++T+EM +P + IG VIGKGG I ++ SG + + + M GTP A
Sbjct: 140 EVTEEMLIPADKIGLVIGKGGDTIRTLQDQSGLRLLNVVQDSSSATGQPKPLRMVGTPAA 199
Query: 766 IALAQYLIN 774
I A+ L++
Sbjct: 200 IETAKALVH 208
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
Q T M VP G VIGKGG I +I + SGA ++ +SE++ + +++ + GT
Sbjct: 331 QSTFYMHVPATKCGLVIGKGGENIKQIERDSGASCGLAAASEQKNE-DEKVFEIKGTQYQ 389
Query: 766 IALAQYLINMSV 777
I A +L+ + V
Sbjct: 390 IHHASHLVKIKV 401
>gi|395733398|ref|XP_003776230.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Pongo abelii]
Length = 464
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 23/184 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++ GK GE +K L + + + + DSS P+RI+++ +D++ I
Sbjct: 45 LRILLQSKNAGAMTGKGGENIKALPTDYSASVSVPDSSGPQRILSISADIDTIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +LRL++ S G II
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLEPDAVECLNYQHYKGSDFD---YELRLLIHQSLAGGIIR 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G +IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGVKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDWVVECIKLILDLISESPIKGR 221
Query: 602 TIPY 605
PY
Sbjct: 222 AQPY 225
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++ GK GE +K L + + + + DSS P+RI+++ +D++ I +
Sbjct: 49 LQSKNAGAMTGKGGENIKALPTDYSASVSVPDSSGPQRILSISADIDTIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +LRL++ S G II G
Sbjct: 109 EEGLQLPSPTATSQLPLEPDAVECLNYQHYKGSDFD---YELRLLIHQSLAGGIIRVKGV 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDWVVECIKLILDLISESPIKGRAQPY 225
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +I SGA I+I E E S DR IT+TGT + I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKI---DEPLEGSEDRIITITGTQEQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +I SGA I+I E E S DR IT+TGT + I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKI---DEPLEGSEDRIITITGTQEQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK I SGAS+ + + L S +R + I G + +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKI-DEPLEGSEDRIITITGTQEQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK I SGAS+ + + L S +R + I G + +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKI-DEPLEGSEDRIITITGTQEQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
>gi|395733400|ref|XP_003776231.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Pongo abelii]
Length = 466
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 23/184 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++ GK GE +K L + + + + DSS P+RI+++ +D++ I
Sbjct: 45 LRILLQSKNAGAMTGKGGENIKALPTDYSASVSVPDSSGPQRILSISADIDTIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +LRL++ S G II
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLEPDAVECLNYQHYKGSDFD---YELRLLIHQSLAGGIIR 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G +IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGVKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDWVVECIKLILDLISESPIKGR 221
Query: 602 TIPY 605
PY
Sbjct: 222 AQPY 225
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++ GK GE +K L + + + + DSS P+RI+++ +D++ I +
Sbjct: 49 LQSKNAGAMTGKGGENIKALPTDYSASVSVPDSSGPQRILSISADIDTIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +LRL++ S G II G
Sbjct: 109 EEGLQLPSPTATSQLPLEPDAVECLNYQHYKGSDFD---YELRLLIHQSLAGGIIRVKGV 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDWVVECIKLILDLISESPIKGRAQPY 225
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +I SGA I+I E E S DR IT+TGT + I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKI---DEPLEGSEDRIITITGTQEQI 444
Query: 322 ALAQYLINMSVELLR 336
AQYL+ SV+ ++
Sbjct: 445 QNAQYLLQNSVKHVK 459
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +I SGA I+I E E S DR IT+TGT + I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKI---DEPLEGSEDRIITITGTQEQI 444
Query: 767 ALAQYLINMSVELLR 781
AQYL+ SV+ ++
Sbjct: 445 QNAQYLLQNSVKHVK 459
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK I SGAS+ + + L S +R + I G + +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKI-DEPLEGSEDRIITITGTQEQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK I SGAS+ + + L S +R + I G + +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKI-DEPLEGSEDRIITITGTQEQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
>gi|432911382|ref|XP_004078652.1| PREDICTED: uncharacterized protein LOC101169884 [Oryzias latipes]
Length = 666
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 17/144 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE- 62
VG IIG+ GE + ++++ESG KI I+ S PER VT+ G DS+ A L+++ +E+
Sbjct: 110 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPERSVTLTGPQDSIQAAKRLLSEIVEKG 169
Query: 63 -----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
FH N +G +Q ++VPAS+ G +IGKGG IK+++E +G + +
Sbjct: 170 RPAPAFHHN-------DGPGMTVQ-EIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQ 221
Query: 118 DMLPNS-TEREVNIKGVPDAVTQA 140
D N+ ++ + I G P V QA
Sbjct: 222 DGPQNTGADKPLRISGEPFKVQQA 245
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 17/144 (11%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE- 507
VG IIG+ GE + ++++ESG KI I+ S PER VT+ G DS+ A L+++ +E+
Sbjct: 110 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPERSVTLTGPQDSIQAAKRLLSEIVEKG 169
Query: 508 -----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 562
FH N +G +Q ++VPAS+ G +IGKGG IK+++E +G + +
Sbjct: 170 RPAPAFHHN-------DGPGMTVQ-EIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQ 221
Query: 563 DMLPNS-TEREVNIKGVPDAVTQA 585
D N+ ++ + I G P V QA
Sbjct: 222 DGPQNTGADKPLRISGEPFKVQQA 245
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 21/154 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D S P+RI ++G D A +I +
Sbjct: 283 VGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSAPDRIAQIMGPPDQAQHAADIIADLLRSV 342
Query: 64 H---------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 108
N ++G G L + VP + G IIGKGG IK I +
Sbjct: 343 QSGGPPGHGGGRGRGRGQGNWNMGPPGG--LQEFTFTVPTMKTGLIIGKGGETIKGISQQ 400
Query: 109 SGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
SGA + + + PNS + ++G P + A
Sbjct: 401 SGARIELQRNPPPNSDPNIKMFTVRGSPQQIDYA 434
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 21/154 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D S P+RI ++G D A +I +
Sbjct: 283 VGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSAPDRIAQIMGPPDQAQHAADIIADLLRSV 342
Query: 509 H---------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
N ++G G L + VP + G IIGKGG IK I +
Sbjct: 343 QSGGPPGHGGGRGRGRGQGNWNMGPPGG--LQEFTFTVPTMKTGLIIGKGGETIKGISQQ 400
Query: 554 SGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
SGA + + + PNS + ++G P + A
Sbjct: 401 SGARIELQRNPPPNSDPNIKMFTVRGSPQQIDYA 434
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
++E VP+ ++G +IG+GG +I I++ SG I+I+ S +R++T+TG D+I
Sbjct: 100 SEEFKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDS---GGMPERSVTLTGPQDSIQ 156
Query: 323 LAQYLINMSVELLR 336
A+ L++ VE R
Sbjct: 157 AAKRLLSEIVEKGR 170
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
++E VP+ ++G +IG+GG +I I++ SG I+I+ S +R++T+TG D+I
Sbjct: 100 SEEFKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDS---GGMPERSVTLTGPQDSIQ 156
Query: 768 LAQYLINMSVELLR 781
A+ L++ VE R
Sbjct: 157 AAKRLLSEIVEKGR 170
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSK-IYISD---SSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G +IGK GET+K L+E +G K + I D ++ ++ + + G + +A ++ + I
Sbjct: 194 KAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFKVQQAKEMVMELI 253
Query: 61 -EEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E+ + Q G GES L + VP G +IG+ G IK I+ +G +
Sbjct: 254 REQGFREQRGEYGSRIGGES----LDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKP 309
Query: 118 DMLPNSTEREVNIKGVPDAVTQA 140
D ++ +R I G PD A
Sbjct: 310 DDG-SAPDRIAQIMGPPDQAQHA 331
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP G +IGKGG I I + SGA I + ++ D N + T+ G+P I A+
Sbjct: 376 FTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNSDPNIKMFTVRGSPQQIDYAR 435
Query: 326 YLINMSV 332
L+ +
Sbjct: 436 QLVEEKI 442
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP G +IGKGG I I + SGA I + ++ D N + T+ G+P I A+
Sbjct: 376 FTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNSDPNIKMFTVRGSPQQIDYAR 435
Query: 771 YLINMSV 777
L+ +
Sbjct: 436 QLVEEKI 442
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 248 RDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEED 306
R P+ N +E+ VP G VIGKGG I +++ +G M+ I +
Sbjct: 170 RPAPAFHHNDGPGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNT-- 227
Query: 307 SNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGE--SNMDDFSSDNNLPSSAP- 363
D+ + ++G P + A+ M +EL+R E GE S + S D +P A
Sbjct: 228 GADKPLRISGEPFKVQQAK---EMVMELIREQGFREQRGEYGSRIGGESLDVPVPRFAVG 284
Query: 364 -LAGLNAS---------------NPLAAALP-QLAQILTKPGALNALTSLSALGGLSDLL 406
+ G N P + P ++AQI+ P + ++DLL
Sbjct: 285 IVIGRNGEMIKKIQNDTGVRIQFKPDDGSAPDRIAQIMGPPDQAQHAADI-----IADLL 339
Query: 407 GGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLR 466
SGG G+ GG G N+ N+ G + + + G IIGK GET+K +
Sbjct: 340 RSVQSGGPPGHGGGRGRGRGQGNW-NMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGIS 398
Query: 467 EESGSKIYISDSSTPE-----RIVTVIGSMDSLFRAFSLITKNI 505
++SG++I + + P ++ TV GS + A L+ + I
Sbjct: 399 QQSGARIELQRNPPPNSDPNIKMFTVRGSPQQIDYARQLVEEKI 442
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 159/343 (46%), Gaps = 40/343 (11%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRI-----SKSSEEEEDSNDRTITMTGTPDA 320
+ VP +VIGK G+ I ++R +S + I++ S + S D + +TG DA
Sbjct: 143 ILVPASQAASVIGKSGSVIKKLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFVQITG--DA 200
Query: 321 IALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLA-AALPQ 379
A+ + L +S + + E+++D+ LPS P+ ++ ++ A++P
Sbjct: 201 RAVKKALFAVSTIMYKCPSKENIPLETSIDELPPTIILPSELPVYPASSLYSVSDASMP- 259
Query: 380 LAQILTKPGALNALTSLSALGGLS------DLLGGGSSGGGSGNSGGFGGVPQGPNYANI 433
+ SLS LG S D + GG VP P Y
Sbjct: 260 -----------SGHPSLSILGATSRGSHVPDFTVPIDTHGGLPIYQSM--VPAVPTYNTP 306
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSM 491
+ +G + +R + G ++G +IGK+G T+K +R+ESG+++ + D+ E I+TV
Sbjct: 307 KCSG-ELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITV---- 361
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
S + + +E Q K + E ++ LRL+VP + G +IGKGGS I +R
Sbjct: 362 SSTEATDDVKSAAVEAVLLLQAK-INDETEDRM-HLRLLVPGNVIGCLIGKGGSIINDMR 419
Query: 552 ETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICL 591
S A ++++ P +S++ V + G D + A+ QI L
Sbjct: 420 NKSKAIIHISKGTKPRKASSSDELVEVFGEVDKLRDALVQIVL 462
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 154/372 (41%), Gaps = 51/372 (13%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTV---IGSMDSLFRA 497
R + K +GS+IGK G+ + +R+++ +K+ + D +R++ V + D +
Sbjct: 41 RILCPDKVIGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRDVMLSD 100
Query: 498 FSLITKNIEE-----------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
+ + E H L +S + ++VPASQ S+IGK GS
Sbjct: 101 INADDDDDREPVCAAQNALLKVHDAIVGALAVTDDSDDKEANILVPASQAASVIGKSGSV 160
Query: 547 IKTIRETSGASVYVA----SDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
IK +R S + + V SD+ + S + V I G AV +A++ + IM P K
Sbjct: 161 IKKLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIMYKCPSK 220
Query: 600 GATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNP--LAGLAALGLGGNSGGGMGG 657
IP ++ S+ P P L A L S M
Sbjct: 221 -ENIP-------------------LETSIDELPPTIILPSELPVYPASSLYSVSDASMPS 260
Query: 658 GLNAAALAALAS--SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPN 715
G + ++ S S + +P + + + P+ T + ++ + P
Sbjct: 261 GHPSLSILGATSRGSHVPDFTVPIDTHGGLPIYQSMVPAVPTYNTPKCSGELLLRVVCPG 320
Query: 716 ELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINM 775
+ IG VIGK G I IRK SGA + + + ++E+S IT++ T +A +
Sbjct: 321 DKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEES---IITVSST-EATDDVKSAAVE 376
Query: 776 SVELLRANLNGE 787
+V LL+A +N E
Sbjct: 377 AVLLLQAKINDE 388
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 152/366 (41%), Gaps = 51/366 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTV---IGSMDSLFRAFSLITK 58
K +GS+IGK G+ + +R+++ +K+ + D +R++ V + D + +
Sbjct: 47 KVIGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRDVMLSDINADDD 106
Query: 59 NIEE-----------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ E H L +S + ++VPASQ S+IGK GS IK +R
Sbjct: 107 DDREPVCAAQNALLKVHDAIVGALAVTDDSDDKEANILVPASQAASVIGKSGSVIKKLRS 166
Query: 108 TSGASVYVA----SDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
S + + V SD+ + S + V I G AV +A++ + IM P K IP
Sbjct: 167 VSKSFIKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIMYKCPSK-ENIP- 224
Query: 161 RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNP--LAGLAALGLGGNSGGGMGGGLNAAA 218
++ S+ P P L A L S M G + +
Sbjct: 225 ------------------LETSIDELPPTIILPSELPVYPASSLYSVSDASMPSGHPSLS 266
Query: 219 LAALAS--SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAV 276
+ S S + +P + + + P+ T + ++ + P + IG V
Sbjct: 267 ILGATSRGSHVPDFTVPIDTHGGLPIYQSMVPAVPTYNTPKCSGELLLRVVCPGDKIGLV 326
Query: 277 IGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLR 336
IGK G I IRK SGA + + + ++E+S IT++ T +A + +V LL+
Sbjct: 327 IGKAGMTIKNIRKESGARVDVDDAKNDKEES---IITVSST-EATDDVKSAAVEAVLLLQ 382
Query: 337 ANLNGE 342
A +N E
Sbjct: 383 AKINDE 388
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITKNI 60
G ++G +IGK+G T+K +R+ESG+++ + D+ E I+TV S + + +
Sbjct: 320 GDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITV----SSTEATDDVKSAAV 375
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
E Q K + E ++ LRL+VP + G +IGKGGS I +R S A ++++
Sbjct: 376 EAVLLLQAK-INDETEDRM-HLRLLVPGNVIGCLIGKGGSIINDMRNKSKAIIHISKGTK 433
Query: 121 P---NSTEREVNIKGVPDAVTQAIYQICL 146
P +S++ V + G D + A+ QI L
Sbjct: 434 PRKASSSDELVEVFGEVDKLRDALVQIVL 462
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 116/263 (44%), Gaps = 33/263 (12%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-EEEDSNDRTITM 314
++ ++++ + VP +IG +IGKGG+ I ++R S A+I ISK ++ + S+D + +
Sbjct: 387 DETEDRMHLRLLVPGNVIGCLIGKGGSIINDMRNKSKAIIHISKGTKPRKASSSDELVEV 446
Query: 315 TGTPDAI--ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
G D + AL Q ++ + ++L+ ++ + G+ D L + ++S P
Sbjct: 447 FGEVDKLRDALVQIVLRLREDVLKDSVGRQNSGK--------DGKLTVATTEPVSSSSFP 498
Query: 373 LAAALPQLAQIL-TKPGALNALTSLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQG 427
+ A LP QI + + S + S L G S G G + P G
Sbjct: 499 MPALLPYSQQITPLRHDQRGEVERGSNVFPRSSLYHGYSPREAVDDGFGVRSSYTSKPYG 558
Query: 428 PNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIV 485
+ M + + ++GK G + +R+ SG+ I I S SS + +
Sbjct: 559 RRVPD---------MEMFIPSSGLSKVMGKHGTNLDNIRKISGADIEILESKSSRHDHVA 609
Query: 486 TVIG------SMDSLFRAFSLIT 502
+ G S ++L +AF + T
Sbjct: 610 HIFGTPEQWQSAENLIKAFIMST 632
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE-EEEDSNDRTITM 759
++ ++++ + VP +IG +IGKGG+ I ++R S A+I ISK ++ + S+D + +
Sbjct: 387 DETEDRMHLRLLVPGNVIGCLIGKGGSIINDMRNKSKAIIHISKGTKPRKASSSDELVEV 446
Query: 760 TGTPDAI--ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
G D + AL Q ++ + ++L+ ++ + G+ D L + ++S P
Sbjct: 447 FGEVDKLRDALVQIVLRLREDVLKDSVGRQNSGK--------DGKLTVATTEPVSSSSFP 498
Query: 818 LAAALPQLAQI 828
+ A LP QI
Sbjct: 499 MPALLPYSQQI 509
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRTITMTGTPDAIA 767
EM +P+ + V+GK GT + IRKISGA I I SKSS +D + GTP+
Sbjct: 565 EMFIPSSGLSKVMGKHGTNLDNIRKISGADIEILESKSSR-----HDHVAHIFGTPEQWQ 619
Query: 768 LAQYLIN 774
A+ LI
Sbjct: 620 SAENLIK 626
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 60/360 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R I+ +VGSIIG+ GE +KK+ EE+ ++I + D + T +RIV + G
Sbjct: 80 FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSP 139
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD++ R F +T E + K G G + +RL+V ++Q ++IGK GS IK+
Sbjct: 140 AMDAVIRVFKRVTGLSE--SEGDGKAYGAAGVA-FCSIRLLVASTQAINLIGKQGSLIKS 196
Query: 550 IRETSGASVYVAS-DMLP---NSTEREVNIKG----VPDAVTQAIYQICLIMVDSPPKGA 601
I+E++GASV V S D +P + ER V ++G V A+ + + +VD +
Sbjct: 197 IQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFLVDH----S 252
Query: 602 TIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNA 661
+P F + + D ++ A + L G S GMG +
Sbjct: 253 VLPL----------------FERTYNATISQDRQSDTWADKSL--LHGTSQTGMGSDYSL 294
Query: 662 AA----LAALASSQLKTNHMPRNQNQNQNQHNRNN---RDGPSQKTNQQQNQITKEMTVP 714
A L +Q++ + +P ++ R++ R G T QI + M +P
Sbjct: 295 PAKRESLYLDRETQMEHSGLPMYGQEHGLSGIRSSGLGRAGAPIVT-----QIAQTMQIP 349
Query: 715 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
+IG GG I IR+ SGA++ + +S ++ T+ + GT + AQ LI
Sbjct: 350 LSYAEDIIGIGGANIAYIRRTSGAILTVQES---RGLPDEITVEIKGTSSQVQTAQQLIQ 406
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 162/352 (46%), Gaps = 60/352 (17%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLFRA 52
+VGSIIG+ GE +KK+ EE+ ++I + D + T +RIV + G +MD++ R
Sbjct: 88 KVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRV 147
Query: 53 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
F +T E + K G G + +RL+V ++Q ++IGK GS IK+I+E++GAS
Sbjct: 148 FKRVTGLSE--SEGDGKAYGAAGVA-FCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS 204
Query: 113 VYVAS-DMLP---NSTEREVNIKG----VPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
V V S D +P + ER V ++G V A+ + + +VD + +P
Sbjct: 205 VRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFLVDH----SVLPL---- 256
Query: 165 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA----LA 220
F + + D ++ A + L G S GMG + A L
Sbjct: 257 ------------FERTYNATISQDRQSDTWADKSL--LHGTSQTGMGSDYSLPAKRESLY 302
Query: 221 ALASSQLKTNHMPRNQNQNQNQHNRNN---RDGPSQKTNQQQNQITKEMTVPNELIGAVI 277
+Q++ + +P ++ R++ R G T QI + M +P +I
Sbjct: 303 LDRETQMEHSGLPMYGQEHGLSGIRSSGLGRAGAPIVT-----QIAQTMQIPLSYAEDII 357
Query: 278 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
G GG I IR+ SGA++ + +S ++ T+ + GT + AQ LI
Sbjct: 358 GIGGANIAYIRRTSGAILTVQES---RGLPDEITVEIKGTSSQVQTAQQLIQ 406
>gi|189441939|gb|AAI67653.1| LOC100170586 protein [Xenopus (Silurana) tropicalis]
Length = 449
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 22/156 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI--- 60
VG IIG+ GE + K+++ESG K+ IS S PER+V++ GS DS+ +A L+ +
Sbjct: 105 VGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDSVQKAKMLLDDIVARG 164
Query: 61 -----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+FH N N G NG Q I ++PA + G IIGKGG IK ++E +G + +
Sbjct: 165 RGGPPSQFHDNSN---GQNGSLQEI----MIPAGKAGLIIGKGGETIKQLQERAGVKMIL 217
Query: 116 ASDMLPNST-EREVNIKGVPDAVTQAIYQICLIMVD 150
D N+ ++ + I G P V QA C +++D
Sbjct: 218 IQDGSQNTNMDKPLRIVGEPFKVQQA----CEMVMD 249
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 22/156 (14%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI--- 505
VG IIG+ GE + K+++ESG K+ IS S PER+V++ GS DS+ +A L+ +
Sbjct: 105 VGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDSVQKAKMLLDDIVARG 164
Query: 506 -----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+FH N N G NG Q I ++PA + G IIGKGG IK ++E +G + +
Sbjct: 165 RGGPPSQFHDNSN---GQNGSLQEI----MIPAGKAGLIIGKGGETIKQLQERAGVKMIL 217
Query: 561 ASDMLPNST-EREVNIKGVPDAVTQAIYQICLIMVD 595
D N+ ++ + I G P V QA C +++D
Sbjct: 218 IQDGSQNTNMDKPLRIVGEPFKVQQA----CEMVMD 249
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R +++TG+PD++
Sbjct: 94 MTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDS---GGMPERVVSLTGSPDSV 150
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 357
A+ L++ V G GG S D S+ N
Sbjct: 151 QKAKMLLDDIV------ARGRGGPPSQFHDNSNGQN 180
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R +++TG+PD++
Sbjct: 94 MTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDS---GGMPERVVSLTGSPDSV 150
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 802
A+ L++ V G GG S D S+ N
Sbjct: 151 QKAKMLLDDIV------ARGRGGPPSQFHDNSNGQN 180
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP G IIG+GG QI I++ SG V ++ D +P ER V++ G PD+V +A
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP---ERVVSLTGSPDSVQKA 153
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 585
VP G IIG+GG QI I++ SG V ++ D +P ER V++ G PD+V +A
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP---ERVVSLTGSPDSVQKA 153
>gi|402862107|ref|XP_003895411.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Papio anubis]
Length = 103
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 27 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 83
Query: 323 LAQYLIN 329
LAQYLIN
Sbjct: 84 LAQYLIN 90
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+T+PN+LIG +IG+ GTKI EIR++SGA I+I+ ++ E S++R IT+TGTP I+
Sbjct: 27 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAT---EGSSERQITITGTPANIS 83
Query: 768 LAQYLIN 774
LAQYLIN
Sbjct: 84 LAQYLIN 90
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I G P ++ A Y
Sbjct: 29 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISLAQY 87
Query: 143 QI 144
I
Sbjct: 88 LI 89
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
L +P G IIG+ G++I IR+ SGA + +A + S+ER++ I G P ++ A Y
Sbjct: 29 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISLAQY 87
Query: 588 QI 589
I
Sbjct: 88 LI 89
>gi|302768295|ref|XP_002967567.1| hypothetical protein SELMODRAFT_88821 [Selaginella moellendorffii]
gi|300164305|gb|EFJ30914.1| hypothetical protein SELMODRAFT_88821 [Selaginella moellendorffii]
Length = 272
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 96/172 (55%), Gaps = 14/172 (8%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRA 497
R ++ E GS+IGK G T+ L+ +SG++I +S S T +R+V + G+++ + A
Sbjct: 1 RFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSGAINDVLTA 60
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
+LI I++ ++ ++ +S+ QLRL+VP S CG+IIGKGG IK+ E S AS
Sbjct: 61 LNLILSKIQKETEDDSQT-----DSKPNQLRLVVPNSVCGAIIGKGGGTIKSFIEDSEAS 115
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
+ + S +L ++R V I G ++ Q + + LI+ + + Y P
Sbjct: 116 IKL-SGILQGISDRLVTITG---SIEQQLKAVELILTKLLGDSSYLDYAAAP 163
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 93/165 (56%), Gaps = 14/165 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKN 59
E GS+IGK G T+ L+ +SG++I +S S T +R+V + G+++ + A +LI
Sbjct: 8 EAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSGAINDVLTALNLILSK 67
Query: 60 IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
I++ ++ ++ +S+ QLRL+VP S CG+IIGKGG IK+ E S AS+ + S +
Sbjct: 68 IQKETEDDSQT-----DSKPNQLRLVVPNSVCGAIIGKGGGTIKSFIEDSEASIKL-SGI 121
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
L ++R V I G ++ Q + + LI+ + + Y P
Sbjct: 122 LQGISDRLVTITG---SIEQQLKAVELILTKLLGDSSYLDYAAAP 163
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS-NDRTITMTGTPDAIALA 324
+ VP+E IGA++G+GG + EI++ SG I+IS+ + + N R +T+ GT + + +A
Sbjct: 197 LAVPDEHIGAIVGRGGKTLGEIQQASGVTIKISERGDFVSGTKNSRKVTLVGTAEGLQIA 256
Query: 325 QYLINMSVE 333
Q+ + V+
Sbjct: 257 QFYLTAKVQ 265
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS-NDRTITMTGTPDAIALA 769
+ VP+E IGA++G+GG + EI++ SG I+IS+ + + N R +T+ GT + + +A
Sbjct: 197 LAVPDEHIGAIVGRGGKTLGEIQQASGVTIKISERGDFVSGTKNSRKVTLVGTAEGLQIA 256
Query: 770 QYLINMSVE 778
Q+ + V+
Sbjct: 257 QFYLTAKVQ 265
>gi|348536733|ref|XP_003455850.1| PREDICTED: far upstream element-binding protein 2-like [Oreochromis
niloticus]
Length = 678
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 10/138 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG IIG+ GE + K+++ESG K+ I+ S PER +++ GS D++ RA +L+ +
Sbjct: 112 VGLIIGRGGEQINKIQQESGCKVQIAHDSVGLPERSISLTGSPDAIQRARALLDDIVSRG 171
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM-LPN 122
H++ N G+S +Q +I+PA + G IIGKGG IK ++E +G + + D P
Sbjct: 172 HESTN------GQSSSMQ-EMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQPP 224
Query: 123 STEREVNIKGVPDAVTQA 140
+ ++ + I G P V QA
Sbjct: 225 NIDKPLRIIGDPYKVQQA 242
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 10/138 (7%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG IIG+ GE + K+++ESG K+ I+ S PER +++ GS D++ RA +L+ +
Sbjct: 112 VGLIIGRGGEQINKIQQESGCKVQIAHDSVGLPERSISLTGSPDAIQRARALLDDIVSRG 171
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM-LPN 567
H++ N G+S +Q +I+PA + G IIGKGG IK ++E +G + + D P
Sbjct: 172 HESTN------GQSSSMQ-EMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQPP 224
Query: 568 STEREVNIKGVPDAVTQA 585
+ ++ + I G P V QA
Sbjct: 225 NIDKPLRIIGDPYKVQQA 242
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+SGE +KK++ ++G KI D + P++I ++G D A S+IT ++
Sbjct: 282 VGVVIGRSGEMIKKIQSDAGVKIQFKPDDGTGPDKIAHIMGPPDQCQHAASIITDLLQSI 341
Query: 64 HKNQNKHLGGNGESQLI--------------------QLRLIVPASQCGSIIGKGGSQIK 103
+ GG ++ +PA +CG +IG+GG +K
Sbjct: 342 RAREEGGQGGPPGPGAGMPPGGRGQGRGQGNWGPPGGEMTFSIPAHKCGLVIGRGGENVK 401
Query: 104 TIRETSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQICLIMVDSP--------- 152
+I + +GA V ++ PN + I+G P + A Q+ +++P
Sbjct: 402 SINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQIDHA-KQLIEEKIEAPLCPVGGGPG 460
Query: 153 ---PKGATIPYRPLPQNAGGPG 171
P G PY P P NAG PG
Sbjct: 461 PGGPPGPMGPYNPNPYNAGPPG 482
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+SGE +KK++ ++G KI D + P++I ++G D A S+IT ++
Sbjct: 282 VGVVIGRSGEMIKKIQSDAGVKIQFKPDDGTGPDKIAHIMGPPDQCQHAASIITDLLQSI 341
Query: 509 HKNQNKHLGGNGESQLI--------------------QLRLIVPASQCGSIIGKGGSQIK 548
+ GG ++ +PA +CG +IG+GG +K
Sbjct: 342 RAREEGGQGGPPGPGAGMPPGGRGQGRGQGNWGPPGGEMTFSIPAHKCGLVIGRGGENVK 401
Query: 549 TIRETSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQICLIMVDSP--------- 597
+I + +GA V ++ PN + I+G P + A Q+ +++P
Sbjct: 402 SINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQIDHA-KQLIEEKIEAPLCPVGGGPG 460
Query: 598 ---PKGATIPYRPLPQNAGGPG 616
P G PY P P NAG PG
Sbjct: 461 PGGPPGPMGPYNPNPYNAGPPG 482
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+E VP+ ++G +IG+GG +I +I++ SG ++I+ S +R+I++TG+PDAI
Sbjct: 101 MTEECRVPDSMVGLIIGRGGEQINKIQQESGCKVQIAHDS---VGLPERSISLTGSPDAI 157
Query: 322 ALAQYLINMSVELLRANLNGE 342
A+ L++ V + NG+
Sbjct: 158 QRARALLDDIVSRGHESTNGQ 178
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+E VP+ ++G +IG+GG +I +I++ SG ++I+ S +R+I++TG+PDAI
Sbjct: 101 MTEECRVPDSMVGLIIGRGGEQINKIQQESGCKVQIAHDS---VGLPERSISLTGSPDAI 157
Query: 767 ALAQYLINMSVELLRANLNGE 787
A+ L++ V + NG+
Sbjct: 158 QRARALLDDIVSRGHESTNGQ 178
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 18/152 (11%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTPERI---VTVIGSMDSLFRAFSL 500
I+ + G IIGK GET+K+L+E +G K I I D+S P I + +IG + +A +
Sbjct: 186 IIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQPPNIDKPLRIIGDPYKVQQAKEM 245
Query: 501 ITKNIEEF-HK---NQNKH---LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
+ + ++E H+ +N++ +GG G + + VP G +IG+ G IK I+
Sbjct: 246 VNEILQERDHQGFGERNEYGSRMGGGG------IEVTVPRHSVGVVIGRSGEMIKKIQSD 299
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+G + D ++ +I G PD A
Sbjct: 300 AGVKIQFKPDDG-TGPDKIAHIMGPPDQCQHA 330
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 18/147 (12%)
Query: 5 EVGSIIGKSGETVKKLREESGSK-IYISDSSTPERI---VTVIGSMDSLFRAFSLITKNI 60
+ G IIGK GET+K+L+E +G K I I D+S P I + +IG + +A ++ + +
Sbjct: 191 KAGLIIGKGGETIKQLQERAGVKMILIQDASQPPNIDKPLRIIGDPYKVQQAKEMVNEIL 250
Query: 61 EEF-HK---NQNKH---LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
+E H+ +N++ +GG G + + VP G +IG+ G IK I+ +G +
Sbjct: 251 QERDHQGFGERNEYGSRMGGGG------IEVTVPRHSVGVVIGRSGEMIKKIQSDAGVKI 304
Query: 114 YVASDMLPNSTEREVNIKGVPDAVTQA 140
D ++ +I G PD A
Sbjct: 305 QFKPDDG-TGPDKIAHIMGPPDQCQHA 330
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP S G IIG+GG QI I++ SG V +A D LP ER +++ G PDA+ +A
Sbjct: 107 VPDSMVGLIIGRGGEQINKIQQESGCKVQIAHDSVGLP---ERSISLTGSPDAIQRA 160
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 585
VP S G IIG+GG QI I++ SG V +A D LP ER +++ G PDA+ +A
Sbjct: 107 VPDSMVGLIIGRGGEQINKIQQESGCKVQIAHDSVGLP---ERSISLTGSPDAIQRA 160
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 265 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
EMT +P G VIG+GG + I + +GA + IS+ D N + T+ G+P I
Sbjct: 379 EMTFSIPAHKCGLVIGRGGENVKSINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQID 438
Query: 323 LAQYLINMSVE 333
A+ LI +E
Sbjct: 439 HAKQLIEEKIE 449
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 710 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
EMT +P G VIG+GG + I + +GA + IS+ D N + T+ G+P I
Sbjct: 379 EMTFSIPAHKCGLVIGRGGENVKSINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQID 438
Query: 768 LAQYLINMSVE 778
A+ LI +E
Sbjct: 439 HAKQLIEEKIE 449
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 140/611 (22%), Positives = 251/611 (41%), Gaps = 147/611 (24%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSM----DSLFRAFSLITKN 59
+GS+IGKSG+ + +R+E+ ++I + D ER++T+ S+ D + +S + +
Sbjct: 55 MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIVDIEYSELDYS 114
Query: 60 IE---------EFHKNQNKHLGGNGESQLI------QLRLIVPASQCGSIIGKGGSQIKT 104
+ + H L E+ I + RL+VP+SQC +IGK GS IK
Sbjct: 115 VPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSIIKN 174
Query: 105 IRETSGASVYVASDML--PNST-----EREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 157
IR + A+V V S + P+ T + V I G ++V +A++ + IM P+
Sbjct: 175 IRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPR-EQ 233
Query: 158 IPYRPLPQNAGGPGLIGNQFGM---------QNSLM---------------GAPDMGNNP 193
IP Q +I + + Q+S+ G + NP
Sbjct: 234 IPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGTLPQGYGENAANP 293
Query: 194 LAGLAA------LGLGGNS----------------GGGMG-GGLNAAALAALASSQLKTN 230
+ +A G GG+S G +G GGL + + S ++ N
Sbjct: 294 VPVFSASALPVVHGFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVN 353
Query: 231 HMPRNQNQNQNQHNRNNRDGPS--------------QKTNQQ-QNQITKEMTVPNELIGA 275
R + + + P +K N + ++++ ++ V +++IG
Sbjct: 354 D-SRTNHDDDCVITVTATESPDDLKSMAVEAVLLLQEKINDEDEDKVKMQLLVSSKVIGC 412
Query: 276 VIGKGGTKIFEIRKISGAMIRISK--SSEEEEDSNDRTITMTGTPDAI--ALAQYLINMS 331
+IGK G+ I EIRK + A I ISK ++ + D ND + ++G + AL Q ++ +
Sbjct: 413 IIGKSGSIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLR 472
Query: 332 VELLRANLNGEGGGESNMDDFSSDNNLPSSAP----------LAGLNASNPLAAALPQLA 381
++LR G S N P+ + GL +++PQ+A
Sbjct: 473 DDVLRDRETG------------SRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVA 520
Query: 382 QIL--TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGG--------FGGVPQGPNYA 431
+ +P ++++ L + GG + G GS G+ + G +GG+P
Sbjct: 521 SVDFNRRPETGSSMSMLPSSGG---IYGYGSFPVGNTSYGSNSSYSSNLYGGLP------ 571
Query: 432 NIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSM 491
Q+T ++ R + VG ++G+ G + +R I+I P +++ S
Sbjct: 572 --QSTTMEVR----IPANAVGKVMGRGGGNLDNIRRVCLIFIFI----FPSSLLSDCHSF 621
Query: 492 DSLFRAFSLIT 502
LF S IT
Sbjct: 622 IRLFFPLSYIT 632
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 81/386 (20%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSM----DSLFRAFSLITKN 504
+GS+IGKSG+ + +R+E+ ++I + D ER++T+ S+ D + +S + +
Sbjct: 55 MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIVDIEYSELDYS 114
Query: 505 IE---------EFHKNQNKHLGGNGESQLI------QLRLIVPASQCGSIIGKGGSQIKT 549
+ + H L E+ I + RL+VP+SQC +IGK GS IK
Sbjct: 115 VPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSIIKN 174
Query: 550 IRETSGASVYVASDML--PNST-----EREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 602
IR + A+V V S + P+ T + V I G ++V +A++ + IM P+
Sbjct: 175 IRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPR-EQ 233
Query: 603 IPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGL-----AALGLGGNSGGGMGG 657
IP Q S++ D+ P AGL + G N +G
Sbjct: 234 IPLDTTVQEVPA------------SIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGT 281
Query: 658 -----GLNAA-ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEM 711
G NAA + ++S L H ++++ ++ ++
Sbjct: 282 LPQGYGENAANPVPVFSASALPVVHGFGGSSRSE--------------------KLAIKV 321
Query: 712 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 771
+ IG VIGKGG I IR+ SG+ I ++ S +D T+T T +PD
Sbjct: 322 ICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDD------ 375
Query: 772 LINMSVE---LLRANLNGEGGGESNM 794
L +M+VE LL+ +N E + M
Sbjct: 376 LKSMAVEAVLLLQEKINDEDEDKVKM 401
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 35/189 (18%)
Query: 420 GFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS 479
GFGG + A ++ I ++G +IGK G T+K +R+ SGS I ++DS
Sbjct: 307 GFGGSSRSEKLA----------IKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSR 356
Query: 480 T---PERIVTVIG--SMDSL----FRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLI 530
T + ++TV S D L A L+ + I + ++++K ++++L+
Sbjct: 357 TNHDDDCVITVTATESPDDLKSMAVEAVLLLQEKIND--EDEDK----------VKMQLL 404
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVA----SDMLPNSTEREVNIKGVPDAVTQAI 586
V + G IIGK GS I IR+ + A ++++ + + + V I G V A+
Sbjct: 405 VSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDAL 464
Query: 587 YQICLIMVD 595
QI L + D
Sbjct: 465 IQIVLRLRD 473
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 25/159 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSST---PERIVTVIG--SMDSL----FRAFSL 55
++G +IGK G T+K +R+ SGS I ++DS T + ++TV S D L A L
Sbjct: 327 KIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAVLL 386
Query: 56 ITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+ + I + ++++K ++++L+V + G IIGK GS I IR+ + A +++
Sbjct: 387 LQEKIND--EDEDK----------VKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHI 434
Query: 116 A----SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 150
+ + + + V I G V A+ QI L + D
Sbjct: 435 SKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRD 473
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 95/181 (52%), Gaps = 27/181 (14%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGS---------- 490
R++ K+ GSIIGK G+ K++R E+ S + I+++ ER+VT+ +
Sbjct: 47 RYLCPVKKTGSIIGKGGDIAKQIRSETKSNMRINEALPGCEERVVTIYSTNEELNHFGDD 106
Query: 491 -------MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
+D+LF+ ++ +I+ N + LG E Q + +R++VP+ Q G +IGKG
Sbjct: 107 GELVCPALDALFKVHDMVVADIDHDDGNDDDDLG---EKQTVTVRMLVPSDQIGCVIGKG 163
Query: 544 GSQIKTIRETSGASVYVASDMLPN-----STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
G I+ +R + A + V D LP+ S + + I G P V +A+YQ+ ++ +P
Sbjct: 164 GQVIQNLRNDTNAQIRVIKDHLPSCALTLSHDELLQIIGEPLVVREALYQVASLLHANPS 223
Query: 599 K 599
+
Sbjct: 224 R 224
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 27/175 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGS---------------- 45
K+ GSIIGK G+ K++R E+ S + I+++ ER+VT+ +
Sbjct: 53 KKTGSIIGKGGDIAKQIRSETKSNMRINEALPGCEERVVTIYSTNEELNHFGDDGELVCP 112
Query: 46 -MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
+D+LF+ ++ +I+ N + LG E Q + +R++VP+ Q G +IGKGG I+
Sbjct: 113 ALDALFKVHDMVVADIDHDDGNDDDDLG---EKQTVTVRMLVPSDQIGCVIGKGGQVIQN 169
Query: 105 IRETSGASVYVASDMLPN-----STEREVNIKGVPDAVTQAIYQICLIMVDSPPK 154
+R + A + V D LP+ S + + I G P V +A+YQ+ ++ +P +
Sbjct: 170 LRNDTNAQIRVIKDHLPSCALTLSHDELLQIIGEPLVVREALYQVASLLHANPSR 224
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 17 VKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE 76
+ ++R+E+G+ I ++ S T E ++ S + S + ++ +G +
Sbjct: 289 INQIRQETGATIRVNTSETDEDDCIIVISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDAN 348
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDM--LPNSTEREVNIKG 132
I RL+V +SQ G +IGKGG+ I +R + A++ + D+ + E V I G
Sbjct: 349 DLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITG 408
Query: 133 VPDAVTQAIYQICL 146
PDA +A+ Q+ L
Sbjct: 409 NPDAAMKALTQVIL 422
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 462 VKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE 521
+ ++R+E+G+ I ++ S T E ++ S + S + ++ +G +
Sbjct: 289 INQIRQETGATIRVNTSETDEDDCIIVISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDAN 348
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDM--LPNSTEREVNIKG 577
I RL+V +SQ G +IGKGG+ I +R + A++ + D+ + E V I G
Sbjct: 349 DLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITG 408
Query: 578 VPDAVTQAIYQICL 591
PDA +A+ Q+ L
Sbjct: 409 NPDAAMKALTQVIL 422
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 17/85 (20%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI------SKSSEEEEDSNDRTITMT 315
I+ + V + IG +IGKGG I E+R ++ A IRI K + E+E+ + +T
Sbjct: 352 ISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEE----MVQIT 407
Query: 316 GTPDAI--ALAQYLINMSVELLRAN 338
G PDA AL Q ++ LRAN
Sbjct: 408 GNPDAAMKALTQVILR-----LRAN 427
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 17/85 (20%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI------SKSSEEEEDSNDRTITMT 760
I+ + V + IG +IGKGG I E+R ++ A IRI K + E+E+ + +T
Sbjct: 352 ISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEE----MVQIT 407
Query: 761 GTPDAI--ALAQYLINMSVELLRAN 783
G PDA AL Q ++ LRAN
Sbjct: 408 GNPDAAMKALTQVILR-----LRAN 427
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS---SEEEEDSNDRTITM 314
++ +T M VP++ IG VIGKGG I +R + A IR+ K S S+D + +
Sbjct: 141 EKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPSCALTLSHDELLQI 200
Query: 315 TGTPDAIALAQYLINMSVELLRAN 338
G P + A Y + LL AN
Sbjct: 201 IGEPLVVREALYQV---ASLLHAN 221
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS---SEEEEDSNDRTITM 759
++ +T M VP++ IG VIGKGG I +R + A IR+ K S S+D + +
Sbjct: 141 EKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPSCALTLSHDELLQI 200
Query: 760 TGTPDAIALAQYLINMSVELLRAN 783
G P + A Y + LL AN
Sbjct: 201 IGEPLVVREALYQV---ASLLHAN 221
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 149/608 (24%), Positives = 244/608 (40%), Gaps = 116/608 (19%)
Query: 227 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF- 285
L+ +H ++ ++ H R +D ++ ++++ + + V ++
Sbjct: 161 LEKDHSTEEKDDSEKDHIREEKDHSEKEHDKEEKD--------DPFVAKVAESEPERVIP 212
Query: 286 -EIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGG 344
++ IS RI + + E N + TP ++ L L + + LL G+GG
Sbjct: 213 SALKAISLVFDRIFAAGDNNETGN---ASAASTPVSLRLL-VLYSQAGWLL-----GKGG 263
Query: 345 GESNMDDFSSDN---------NLPSSAPL---------------AGLNASNPLAAALPQL 380
S + S+DN NLPS A L GLNA + L A P
Sbjct: 264 --SVIKQMSADNGCEIRVLRDNLPSCALLNDKLCQITGEIDSVRKGLNAVSELLLAHP-- 319
Query: 381 AQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYAN--IQTTGV 438
P +A++ + + G S L S G SG F QGP+ AN +
Sbjct: 320 ------PKETDAVSGVHSSGSSSRSLFNQSDGLPSGMQSNFHIPLQGPSQANGPFDIIDL 373
Query: 439 Q-------------RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPER 483
Q R + +VGSIIGK G VK +++++G +I + D+ + +R
Sbjct: 374 QPPIHGHASVPIESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDR 433
Query: 484 IVTVIGSM---DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQL-RLIVPASQCGSI 539
I+++ G D + A + I H + L + + + + RLIV A+Q G +
Sbjct: 434 IISISGPAHPSDGISPAQNAI------LHVQRKIMLPTSDKKEGPAICRLIVSANQVGCV 487
Query: 540 IGKGGSQIKTIRETSGASVYVAS-DMLPN---STEREVNIKGVPDAVTQAIYQIC----- 590
+GKGGS I +R+ SGA + V S D +P + V I G +A+ +A+ QI
Sbjct: 488 LGKGGSIIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQITARLRN 547
Query: 591 -LIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGG 649
L VD P P GL+ +QFG P GN+ L G
Sbjct: 548 HLFRVDRMPAMGPNMRPPF-------GLLDSQFG--------PFAGNHESPSLFHKDFMG 592
Query: 650 NSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 709
G+ + L S L + +P GP Q + +T
Sbjct: 593 RPLDGISAPWTVKGMRDL-SDPLSISDIP-----GAGHREAGGFSGPGQPS--MMPNLTA 644
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP +I A+ + G + IR+ S A I + +E D+ D + ++GTPD + A
Sbjct: 645 EVLVPRLIIPALCSEDGGCLDRIREFSEAKITV---AEPIADAMDIPVLISGTPDQMHAA 701
Query: 770 QYLINMSV 777
+ L+ V
Sbjct: 702 RSLVQAFV 709
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 151/344 (43%), Gaps = 48/344 (13%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSM---DSLFRAFSLITKN 59
+VGSIIGK G VK +++++G +I + D+ + +RI+++ G D + A + I
Sbjct: 398 KVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHPSDGISPAQNAI--- 454
Query: 60 IEEFHKNQNKHLGGNGESQLIQL-RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS- 117
H + L + + + + RLIV A+Q G ++GKGGS I +R+ SGA + V S
Sbjct: 455 ---LHVQRKIMLPTSDKKEGPAICRLIVSANQVGCVLGKGGSIIAEMRKLSGAFIIVLSK 511
Query: 118 DMLPN---STEREVNIKGVPDAVTQAIYQIC------LIMVDSPPKGATIPYRPLPQNAG 168
D +P + V I G +A+ +A+ QI L VD P P
Sbjct: 512 DKIPRGVPEHDEVVQISGSCEAIQEALMQITARLRNHLFRVDRMPAMGPNMRPPF----- 566
Query: 169 GPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
GL+ +QFG P GN+ L G G+ + L S L
Sbjct: 567 --GLLDSQFG--------PFAGNHESPSLFHKDFMGRPLDGISAPWTVKGMRDL-SDPLS 615
Query: 229 TNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
+ +P GP Q + +T E+ VP +I A+ + G + IR
Sbjct: 616 ISDIP-----GAGHREAGGFSGPGQPS--MMPNLTAEVLVPRLIIPALCSEDGGCLDRIR 668
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+ S A I + +E D+ D + ++GTPD + A+ L+ V
Sbjct: 669 EFSEAKITV---AEPIADAMDIPVLISGTPDQMHAARSLVQAFV 709
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 34 STPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLG-GNGESQLIQLRLIVPASQCG 92
S PER++ S +A SL+ I F N G + S + LRL+V SQ G
Sbjct: 205 SEPERVIP------SALKAISLVFDRI--FAAGDNNETGNASAASTPVSLRLLVLYSQAG 256
Query: 93 SIIGKGGSQIKTIRETSGASVYVASDMLPNST---EREVNIKGVPDAVTQAIYQICLIMV 149
++GKGGS IK + +G + V D LP+ ++ I G D+V + + + +++
Sbjct: 257 WLLGKGGSVIKQMSADNGCEIRVLRDNLPSCALLNDKLCQITGEIDSVRKGLNAVSELLL 316
Query: 150 DSPPK 154
PPK
Sbjct: 317 AHPPK 321
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 132
+ R++ P + GSIIGKGG+ +KTI++ +G + V D +P S +R ++I G
Sbjct: 388 LSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVL-DTVPKSEDRIISISG 439
>gi|395322965|gb|EJF55518.1| hypothetical protein DICSQDRAFT_175811 [Dichomitus squalens
LYAD-421 SS1]
Length = 280
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 94/170 (55%), Gaps = 6/170 (3%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ K I+GK+ + +L+EE+G +S++ P E+++ V+GS++S A+
Sbjct: 14 IRALVGKKHAQVILGKNSVNLMRLQEETGVTASLSEA-IPGVGEQVLRVLGSVESATEAY 72
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
LI ++ H ++ + + LRL++P + GSIIG+ G +IK + +SGA +
Sbjct: 73 FLIASDLIRTHPLRSTSVESDSAPTTC-LRLLIPHNMLGSIIGRHGRKIKAMHASSGAQI 131
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 607
MLPNSTE + + G +++ +A+ ICL ++ A T+ + P
Sbjct: 132 STREHMLPNSTEHIMQLCGTSESIRRAVRDICLCFLEDDELCAGTVLFHP 181
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 90/163 (55%), Gaps = 6/163 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNI 60
K I+GK+ + +L+EE+G +S++ P E+++ V+GS++S A+ LI ++
Sbjct: 21 KHAQVILGKNSVNLMRLQEETGVTASLSEA-IPGVGEQVLRVLGSVESATEAYFLIASDL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
H ++ + + LRL++P + GSIIG+ G +IK + +SGA + ML
Sbjct: 80 IRTHPLRSTSVESDSAPTTC-LRLLIPHNMLGSIIGRHGRKIKAMHASSGAQISTREHML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRP 162
PNSTE + + G +++ +A+ ICL ++ A T+ + P
Sbjct: 139 PNSTEHIMQLCGTSESIRRAVRDICLCFLEDDELCAGTVLFHP 181
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 249 DGPSQKTNQQQ--NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
D PS Q T+E+ VP++++G++IG+GGT I E++++SGA I I+K+ E +
Sbjct: 185 DQPSSPVTQPTGTRPFTREIDVPSDMVGSIIGRGGTNINEMKRMSGAEIVIAKAPREGVE 244
Query: 307 SNDRTITMTGTPDAIALAQYLINMSVELLR 336
T+T+ T DA A+ L+ +E R
Sbjct: 245 RQ--TVTIVETYDAYKRARTLLYEHIEKTR 272
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 694 DGPSQKTNQQQ--NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
D PS Q T+E+ VP++++G++IG+GGT I E++++SGA I I+K+ E +
Sbjct: 185 DQPSSPVTQPTGTRPFTREIDVPSDMVGSIIGRGGTNINEMKRMSGAEIVIAKAPREGVE 244
Query: 752 SNDRTITMTGTPDAIALAQYLINMSVELLR 781
T+T+ T DA A+ L+ +E R
Sbjct: 245 RQ--TVTIVETYDAYKRARTLLYEHIEKTR 272
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 26/181 (14%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVT-------------- 486
R++ K+ GSIIGK GE K++R E+ S + I+++ ER+VT
Sbjct: 47 RYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDD 106
Query: 487 ---VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
V ++D+LF+ ++ + ++ + GE Q + +R++VP+ Q G +IGKG
Sbjct: 107 GELVCPALDALFKVHDMVVADADQ--DDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKG 164
Query: 544 GSQIKTIRETSGASVYVASDMLPN-----STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
G I+ +R + A + V D LP S + + I G P V +A+YQ+ ++ D+P
Sbjct: 165 GQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPS 224
Query: 599 K 599
+
Sbjct: 225 R 225
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 26/175 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVT-----------------VIG 44
K+ GSIIGK GE K++R E+ S + I+++ ER+VT V
Sbjct: 53 KKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCP 112
Query: 45 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
++D+LF+ ++ + ++ + GE Q + +R++VP+ Q G +IGKGG I+
Sbjct: 113 ALDALFKVHDMVVADADQ--DDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQN 170
Query: 105 IRETSGASVYVASDMLPN-----STEREVNIKGVPDAVTQAIYQICLIMVDSPPK 154
+R + A + V D LP S + + I G P V +A+YQ+ ++ D+P +
Sbjct: 171 LRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSR 225
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 17 VKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE 76
+ ++R+E+G+ I ++ S T + + S + S + ++ +G +
Sbjct: 291 INQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDAN 350
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDM--LPNSTEREVNIKG 132
I RL+V +SQ G +IGKGG+ I +R + A++ + D+ + E V I G
Sbjct: 351 DLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITG 410
Query: 133 VPDAVTQAIYQICL 146
PDA +A+ Q+ L
Sbjct: 411 SPDAAMKALTQVIL 424
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 462 VKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE 521
+ ++R+E+G+ I ++ S T + + S + S + ++ +G +
Sbjct: 291 INQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDAN 350
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDM--LPNSTEREVNIKG 577
I RL+V +SQ G +IGKGG+ I +R + A++ + D+ + E V I G
Sbjct: 351 DLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITG 410
Query: 578 VPDAVTQAIYQICL 591
PDA +A+ Q+ L
Sbjct: 411 SPDAAMKALTQVIL 424
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 17/85 (20%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI------SKSSEEEEDSNDRTITMT 315
I+ + V + IG +IGKGG I E+R ++ A IRI K + E+E+ + +T
Sbjct: 354 ISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEE----MVQIT 409
Query: 316 GTPDAI--ALAQYLINMSVELLRAN 338
G+PDA AL Q ++ LRAN
Sbjct: 410 GSPDAAMKALTQVILR-----LRAN 429
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 17/85 (20%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI------SKSSEEEEDSNDRTITMT 760
I+ + V + IG +IGKGG I E+R ++ A IRI K + E+E+ + +T
Sbjct: 354 ISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEE----MVQIT 409
Query: 761 GTPDAI--ALAQYLINMSVELLRAN 783
G+PDA AL Q ++ LRAN
Sbjct: 410 GSPDAAMKALTQVILR-----LRAN 429
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 127/564 (22%), Positives = 223/564 (39%), Gaps = 92/564 (16%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE--EEEDSNDRTITM 314
Q+ M V +G V+GKGG I ++R+ +GA IR+S + S D + +
Sbjct: 111 QEDTCCVVRMLVEQAQVGCVLGKGGEVISDLRRRTGANIRVSDKRDLPACAGSEDSLVAV 170
Query: 315 TGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLA 374
G +A A++ L +S LLR + S + AP+ + A
Sbjct: 171 KG--EAQAVSDALRQLSA-LLRTH--------------SQRKPQQARAPMTFNITAVATA 213
Query: 375 AALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQ 434
A P+ AQ +P L ++ + L + P +Q
Sbjct: 214 AVQPEQAQHRRQPMREPVLAPIARPHQCHNCLPDAHA--------------MQPRMTAVQ 259
Query: 435 TTG--VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST------------ 480
V+ ++R ++ +G +IG+ GE ++ +R+++G+ I + + S
Sbjct: 260 EASAVVEVQLRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGSQGARAFPPSEKKG 319
Query: 481 PERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQ----- 535
+R++TV + + + ++ E LG +G + +R++VP Q
Sbjct: 320 VDRVITVAAAEAA----GAAVSPTEEAVCLMALCLLGPSGLPPVPCIRILVPTPQGGTAE 375
Query: 536 ------CGSIIGKGGSQIKTIRETSGASV-----------YVASDMLPNSTEREVNIKGV 578
G ++GKGG+ I +R+ SGA V ++ D+ + V I+G
Sbjct: 376 ALSLLQVGGVLGKGGATITQVRKDSGAGVRLVPLEAEDDRWLPRDVAAGQMHKVVQIEGP 435
Query: 579 PDAVTQAIYQIC--LIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGN 636
A +A+ +C L + +GA P R L + GG QF + M +
Sbjct: 436 ITATVKAVRAVCAQLRAWQARSQGAQ-PARELTEAYGG-AHAPQQFHPMHQAM----LPR 489
Query: 637 NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGP 696
GL GL S MG + + L L+ H Q ++ Q +R
Sbjct: 490 ETAPGLRGRGLPDLSRAEMG--MYDSPLRHCERPVLQLRHPLDLQVLSRGQMDRAMSQPL 547
Query: 697 SQKTNQQQNQITKEMTVPNEL------IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 750
+ QQ + T EL +G V+GK G I +IRKISGA +++S +
Sbjct: 548 MMQQVTQQVVTAPDQTQSCELRLVGVQVGCVLGKAGENITQIRKISGARVKLSDAP---R 604
Query: 751 DSNDRTITMTGTPDAIALAQYLIN 774
+R + ++GT + + A L+
Sbjct: 605 GVTERLLRLSGTCEQVQAAVNLVQ 628
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 151/367 (41%), Gaps = 57/367 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSST------------PERIVTVIGSMDSLFRA 52
+G +IG+ GE ++ +R+++G+ I + + S +R++TV + +
Sbjct: 277 HIGCVIGRRGEMIRTIRDDTGAHIKVHEGSQGARAFPPSEKKGVDRVITVAAAEAA---- 332
Query: 53 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQ-----------CGSIIGKGGSQ 101
+ ++ E LG +G + +R++VP Q G ++GKGG+
Sbjct: 333 GAAVSPTEEAVCLMALCLLGPSGLPPVPCIRILVPTPQGGTAEALSLLQVGGVLGKGGAT 392
Query: 102 IKTIRETSGASV-----------YVASDMLPNSTEREVNIKGVPDAVTQAIYQIC--LIM 148
I +R+ SGA V ++ D+ + V I+G A +A+ +C L
Sbjct: 393 ITQVRKDSGAGVRLVPLEAEDDRWLPRDVAAGQMHKVVQIEGPITATVKAVRAVCAQLRA 452
Query: 149 VDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG 208
+ +GA P R L + GG QF + M + GL GL S
Sbjct: 453 WQARSQGAQ-PARELTEAYGG-AHAPQQFHPMHQAM----LPRETAPGLRGRGLPDLSRA 506
Query: 209 GMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTV 268
MG + + L L+ H Q ++ Q +R + QQ + T
Sbjct: 507 EMG--MYDSPLRHCERPVLQLRHPLDLQVLSRGQMDRAMSQPLMMQQVTQQVVTAPDQTQ 564
Query: 269 PNEL------IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
EL +G V+GK G I +IRKISGA +++S + +R + ++GT + +
Sbjct: 565 SCELRLVGVQVGCVLGKAGENITQIRKISGARVKLSDAP---RGVTERLLRLSGTCEQVQ 621
Query: 323 LAQYLIN 329
A L+
Sbjct: 622 AAVNLVQ 628
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 136/337 (40%), Gaps = 64/337 (18%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMD---SLFRA 497
R + +G++IGK G ++++R+ +G++I + + ER++++ S + L RA
Sbjct: 34 RLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSSDEPGAELCRA 93
Query: 498 ---FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
+ + E Q E +R++V +Q G ++GKGG I +R +
Sbjct: 94 QEALFAVQSRLSEADAAQ--------EDTCCVVRMLVEQAQVGCVLGKGGEVISDLRRRT 145
Query: 555 GASVYVASDM-LPNSTERE---VNIKGVPDAVTQAIYQI-CLIMVDSPPKGATIPYRPLP 609
GA++ V+ LP E V +KG AV+ A+ Q+ L+ S K P
Sbjct: 146 GANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRTHSQRK---------P 196
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS 669
Q A P M N + +A + + LA +A
Sbjct: 197 QQARAP------------------MTFN-ITAVATAAVQPEQAQHRRQPMREPVLAPIAR 237
Query: 670 SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKI 729
N +P + H R Q+ + ++ + VP IG VIG+ G I
Sbjct: 238 PHQCHNCLP-------DAHAMQPRMTAVQEAS-AVVEVQLRLLVPATHIGCVIGRRGEMI 289
Query: 730 FEIRKISGAMIRISKSSE-------EEEDSNDRTITM 759
IR +GA I++ + S+ E+ DR IT+
Sbjct: 290 RTIRDDTGAHIKVHEGSQGARAFPPSEKKGVDRVITV 326
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 134/329 (40%), Gaps = 64/329 (19%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMD---SLFRA---FSLIT 57
+G++IGK G ++++R+ +G++I + + ER++++ S + L RA +
Sbjct: 42 IGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSSDEPGAELCRAQEALFAVQ 101
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
+ E Q E +R++V +Q G ++GKGG I +R +GA++ V+
Sbjct: 102 SRLSEADAAQ--------EDTCCVVRMLVEQAQVGCVLGKGGEVISDLRRRTGANIRVSD 153
Query: 118 DM-LPNSTERE---VNIKGVPDAVTQAIYQI-CLIMVDSPPKGATIPYRPLPQNAGGPGL 172
LP E V +KG AV+ A+ Q+ L+ S K PQ A P
Sbjct: 154 KRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRTHSQRK---------PQQARAP-- 202
Query: 173 IGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
M N + +A + + LA +A N +
Sbjct: 203 ----------------MTFN-ITAVATAAVQPEQAQHRRQPMREPVLAPIARPHQCHNCL 245
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P + H R Q+ + ++ + VP IG VIG+ G I IR +G
Sbjct: 246 P-------DAHAMQPRMTAVQEAS-AVVEVQLRLLVPATHIGCVIGRRGEMIRTIRDDTG 297
Query: 293 AMIRISKSSE-------EEEDSNDRTITM 314
A I++ + S+ E+ DR IT+
Sbjct: 298 AHIKVHEGSQGARAFPPSEKKGVDRVITV 326
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
+++ RL+ PA++ G++IGKGGS I+ +R+++GA + V + + +ER +++
Sbjct: 30 MVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPE-VAGCSERLISL 80
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 575
+++ RL+ PA++ G++IGKGGS I+ +R+++GA + V + + +ER +++
Sbjct: 30 MVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPE-VAGCSERLISL 80
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 13/174 (7%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S+ T ERIV + GS DS
Sbjct: 65 QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDS 124
Query: 494 LFRAFSLITKNIEEF----HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
L + + I + K+ ++ N ++ Q++++VP S G IIGKGG+ IK
Sbjct: 125 LKSVHKFLMEKISQAPQPPAKSPSEQNANNNRAK--QVKIVVPNSTAGLIIGKGGATIKF 182
Query: 550 IRETSGASVYVASDMLP--NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
I E +G+ V ++ N ER + I G P+ +A I +V+ P G+
Sbjct: 183 IMEQTGSRVQISQKATNGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGS 236
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 13/161 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S+ T ERIV + GS DSL + + I
Sbjct: 78 GSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKSVHKFLMEKIS 137
Query: 62 EF----HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
+ K+ ++ N ++ Q++++VP S G IIGKGG+ IK I E +G+ V ++
Sbjct: 138 QAPQPPAKSPSEQNANNNRAK--QVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQ 195
Query: 118 DMLP--NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 156
N ER + I G P+ +A I +V+ P G+
Sbjct: 196 KATNGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGS 236
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++ SGA I+ISK E +N+R +T+TGTP A A
Sbjct: 430 ELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQTA 489
Query: 325 QYLINMSV---ELLRA 337
QYL+ + E +RA
Sbjct: 490 QYLVRARIAQEEAMRA 505
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++ SGA I+ISK E +N+R +T+TGTP A A
Sbjct: 430 ELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQTA 489
Query: 770 QYLINMSV---ELLRA 782
QYL+ + E +RA
Sbjct: 490 QYLVRARIAQEEAMRA 505
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 62 EFHKNQNKHLGGNG---ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--A 116
E ++ + GG G + QL+ L++++P+ GSIIGKGG I +++ +GA++ + +
Sbjct: 46 EMGNSKRSNFGGEGGPEDGQLL-LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 104
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 154
+D P +TER V I G D++ +++++ + + P+
Sbjct: 105 NDFYPGTTERIVVITGSEDSL-KSVHKFLMEKISQAPQ 141
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 271
GG + A + AL + P R+N G + + Q+ ++ +P+
Sbjct: 19 GGTHVAGVPALDVDPTDSRKRPLEGAVEMGNSKRSNFGG---EGGPEDGQLLLKVLIPSY 75
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI-ALAQYLI 328
G++IGKGG I +++K +GA I++SKS++ + +R + +TG+ D++ ++ ++L+
Sbjct: 76 AAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKSVHKFLM 133
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
GG + A + AL + P R+N G + + Q+ ++ +P+
Sbjct: 19 GGTHVAGVPALDVDPTDSRKRPLEGAVEMGNSKRSNFGG---EGGPEDGQLLLKVLIPSY 75
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI-ALAQYLI 773
G++IGKGG I +++K +GA I++SKS++ + +R + +TG+ D++ ++ ++L+
Sbjct: 76 AAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKSVHKFLM 133
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ L VP + G+I+GKGG + +E SGA + ++ + P + R+V I G P A
Sbjct: 429 VELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQT 488
Query: 140 AIYQI 144
A Y +
Sbjct: 489 AQYLV 493
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ L VP + G+I+GKGG + +E SGA + ++ + P + R+V I G P A
Sbjct: 429 VELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQT 488
Query: 585 AIYQI 589
A Y +
Sbjct: 489 AQYLV 493
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ VPN G +IGKGG I I + +G+ ++IS+ + + +R IT+TG P+ A
Sbjct: 161 KIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATNGINLPERVITITGEPEQNDKA 220
Query: 325 -QYLINMSVE 333
+++N VE
Sbjct: 221 CAFIVNKIVE 230
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ VPN G +IGKGG I I + +G+ ++IS+ + + +R IT+TG P+ A
Sbjct: 161 KIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATNGINLPERVITITGEPEQNDKA 220
Query: 770 -QYLINMSVE 778
+++N VE
Sbjct: 221 CAFIVNKIVE 230
>gi|156844703|ref|XP_001645413.1| hypothetical protein Kpol_534p35 [Vanderwaltozyma polyspora DSM
70294]
gi|156116075|gb|EDO17555.1| hypothetical protein Kpol_534p35 [Vanderwaltozyma polyspora DSM
70294]
Length = 482
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
+R + KE ++G GE + K++ + ++I +S++S PER++ + GS ++ +AF+
Sbjct: 103 LRMLCLVKEASLVVGHKGERISKIKNVTSTRINVSENSRDIPERVIHIRGSPQNVSKAFA 162
Query: 500 LITKNI----------EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
LI ++I + ++ N S I + L++P G IIGK GS++
Sbjct: 163 LIVRSITNSKHAKASNDPYNNGDNDDFMTTKNSIPITINLLIPHFLMGYIIGKHGSKLHE 222
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC 590
I E S A + + L +S +R + I G+ D++ A++ IC
Sbjct: 223 IEELSAAKLSASPQQLLSSNDRILTITGIEDSIQTAVFHIC 263
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI- 60
KE ++G GE + K++ + ++I +S++S PER++ + GS ++ +AF+LI ++I
Sbjct: 110 KEASLVVGHKGERISKIKNVTSTRINVSENSRDIPERVIHIRGSPQNVSKAFALIVRSIT 169
Query: 61 ---------EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
+ ++ N S I + L++P G IIGK GS++ I E S A
Sbjct: 170 NSKHAKASNDPYNNGDNDDFMTTKNSIPITINLLIPHFLMGYIIGKHGSKLHEIEELSAA 229
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC 145
+ + L +S +R + I G+ D++ A++ IC
Sbjct: 230 KLSASPQQLLSSNDRILTITGIEDSIQTAVFHIC 263
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 136/309 (44%), Gaps = 51/309 (16%)
Query: 246 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 305
NN D T + IT + +P+ L+G +IGK G+K+ EI ++S A ++S S ++
Sbjct: 182 NNGDNDDFMTTKNSIPITINLLIPHFLMGYIIGKHGSKLHEIEELSAA--KLSASPQQLL 239
Query: 306 DSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS----S 361
SNDR +T+TG D+I A + I + + +N+N E + F N + S +
Sbjct: 240 SSNDRILTITGIEDSIQTAVFHI---CKTISSNIN-ETQRNNRRPIFYQPNPMYSVLLNN 295
Query: 362 APLAGLNA---------------SNPLAAALPQL--AQILTKPGALNALTSLSALGGL-S 403
P LN +N +PQL + ++ P ++ ++ + +
Sbjct: 296 YPNMTLNFAHQQHHQYHPTDKYPTNRGKKRVPQLRASMLVAVPQPISNISGVPQHNNAGA 355
Query: 404 DLLGGG---SSGGGSGNSGGFGGVPQGPNY------------ANIQTTGVQRRMRHIMQG 448
DL+ + N+ F PNY +N+Q T + + I
Sbjct: 356 DLMTNTPIIYTTANVANAPSF-----TPNYGIPSVRVIESKSSNLQQTPLAMVTQEIYID 410
Query: 449 KE-VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNI 505
+ VG++IGK G+ + ++ +G I+I + S ER +T+ G+ + A LI+ I
Sbjct: 411 ESFVGNVIGKDGKHINSIKSSTGCSIFIDNPVSGALERKLTIRGTSMASQAAIMLISNKI 470
Query: 506 EEFHKNQNK 514
E N+ K
Sbjct: 471 ETDKMNKKK 479
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 691 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 750
NN D T + IT + +P+ L+G +IGK G+K+ EI ++S A ++S S ++
Sbjct: 182 NNGDNDDFMTTKNSIPITINLLIPHFLMGYIIGKHGSKLHEIEELSAA--KLSASPQQLL 239
Query: 751 DSNDRTITMTGTPDAIALAQYLINMSV 777
SNDR +T+TG D+I A + I ++
Sbjct: 240 SSNDRILTITGIEDSIQTAVFHICKTI 266
>gi|341899632|gb|EGT55567.1| hypothetical protein CAEBREN_19643 [Caenorhabditis brenneri]
Length = 592
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 11/163 (6%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIGK G+T+K+L E+G+KI D STPER ++G+ D ++RA IT+ +++
Sbjct: 245 VGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAIIMGTRDQIYRATERITELVKK 304
Query: 63 FHKNQNKHLGGNGESQL----IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
Q GGN + + VPA++CG +IGKGG IK I SGA + +
Sbjct: 305 SASQQGGMGGGNMPGSVSNDSAPFYMSVPAAKCGLVIGKGGETIKQINSESGAHCELNRE 364
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 161
+ E+ IKG + A + I + + D PP P+R
Sbjct: 365 AT-GTDEKVFIIKGGKRQIEHAKHLIRIKVGDIPP---NTPFR 403
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 11/163 (6%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG IIGK G+T+K+L E+G+KI D STPER ++G+ D ++RA IT+ +++
Sbjct: 245 VGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAIIMGTRDQIYRATERITELVKK 304
Query: 508 FHKNQNKHLGGNGESQL----IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
Q GGN + + VPA++CG +IGKGG IK I SGA + +
Sbjct: 305 SASQQGGMGGGNMPGSVSNDSAPFYMSVPAAKCGLVIGKGGETIKQINSESGAHCELNRE 364
Query: 564 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 606
+ E+ IKG + A + I + + D PP P+R
Sbjct: 365 AT-GTDEKVFIIKGGKRQIEHAKHLIRIKVGDIPP---NTPFR 403
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIY-------ISDSSTPERIVTVIGSMDSLFRAFSLITK 58
G IIGKSGET+++L+E+SG K+ +SD + P RI G + A L+++
Sbjct: 146 CGLIIGKSGETIRQLQEKSGCKMILVQENQSVSDQAKPLRIT---GDPQKIEHAKQLVSE 202
Query: 59 ------------NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 106
++ H +GG S + ++VP S G IIGK G IK +
Sbjct: 203 ILNSGGDGNGGSGLQMHHGGGGGGVGGGTAS--ARGEVVVPRSSVGIIIGKQGDTIKRLA 260
Query: 107 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
+G + D P++ ER I G D + +A +I ++ S
Sbjct: 261 METGTKIQFKPDDDPSTPERCAIIMGTRDQIYRATERITELVKKS 305
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 451 VGSIIGKSGETVKKLREESGSKIY-------ISDSSTPERIVTVIGSMDSLFRAFSLITK 503
G IIGKSGET+++L+E+SG K+ +SD + P RI G + A L+++
Sbjct: 146 CGLIIGKSGETIRQLQEKSGCKMILVQENQSVSDQAKPLRIT---GDPQKIEHAKQLVSE 202
Query: 504 ------------NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
++ H +GG S + ++VP S G IIGK G IK +
Sbjct: 203 ILNSGGDGNGGSGLQMHHGGGGGGVGGGTAS--ARGEVVVPRSSVGIIIGKQGDTIKRLA 260
Query: 552 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
+G + D P++ ER I G D + +A +I ++ S
Sbjct: 261 METGTKIQFKPDDDPSTPERCAIIMGTRDQIYRATERITELVKKS 305
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IGK G ++ ++ ++G ++ +S S + R+VT+ G+ ++ +A LI + +
Sbjct: 62 VGIVIGKGGSEIQGIQAKAGCRVQMSSDSDNSGNRMVTLEGARCNVEQAKILINEVVARS 121
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPN 122
+ ++ ++ + +++P ++CG IIGK G I+ ++E SG + V + +
Sbjct: 122 QTARPQYGFPRAQNTV---DILIPPNRCGLIIGKSGETIRQLQEKSGCKMILVQENQSVS 178
Query: 123 STEREVNIKGVPDAVTQA 140
+ + I G P + A
Sbjct: 179 DQAKPLRITGDPQKIEHA 196
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IGK G ++ ++ ++G ++ +S S + R+VT+ G+ ++ +A LI + +
Sbjct: 62 VGIVIGKGGSEIQGIQAKAGCRVQMSSDSDNSGNRMVTLEGARCNVEQAKILINEVVARS 121
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASDMLPN 567
+ ++ ++ + +++P ++CG IIGK G I+ ++E SG + V + +
Sbjct: 122 QTARPQYGFPRAQNTV---DILIPPNRCGLIIGKSGETIRQLQEKSGCKMILVQENQSVS 178
Query: 568 STEREVNIKGVPDAVTQA 585
+ + I G P + A
Sbjct: 179 DQAKPLRITGDPQKIEHA 196
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 163/362 (45%), Gaps = 56/362 (15%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG---------- 489
R ++ + VG IIG+ GE VKK+ EE+ S+I I + TPER V V
Sbjct: 87 FRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAKEEPEAPVSP 146
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGG--NGESQLIQLRLIVPASQCGSIIGKGGSQI 547
+MD + R + K I E + LG G S I RL+V +Q GS+IG+ G+ I
Sbjct: 147 AMDGILR----VHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIGRQGATI 202
Query: 548 KTIRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
K I+E SGA V V A++ LP + +R V ++G +V +A+ I + + +
Sbjct: 203 KAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRKFLVDRSVL 262
Query: 604 PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
P + IGNQ ++ +L G+N + + + G G G+G
Sbjct: 263 PLFEADRT------IGNQPQIEENLPHQ-SWGHNQSSSVPSSG-----GAGLGN------ 304
Query: 664 LAALASSQLKTNHMPRN----QNQNQNQHNRNNRDGPSQKTNQQQN--------QITKEM 711
++S+ N+ P + ++Q + + RD PS + N Q+T+ M
Sbjct: 305 TQYMSSAFQHDNYYPPSDLPLESQGHHGLSVYGRD-PSLAGHSVANPPPAPVITQVTQHM 363
Query: 712 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 771
+P A+IG G I +R+ SGA I + E + T+ + GT + AQ
Sbjct: 364 QIPLSYADAIIGTAGANISYMRRNSGATIAV---QETRGVPGEMTVEIRGTATQVQTAQQ 420
Query: 772 LI 773
LI
Sbjct: 421 LI 422
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 159/353 (45%), Gaps = 56/353 (15%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMDSLFRAF 53
VG IIG+ GE VKK+ EE+ S+I I + TPER V V +MD + R
Sbjct: 96 VGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAKEEPEAPVSPAMDGILR-- 153
Query: 54 SLITKNIEEFHKNQNKHLGG--NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
+ K I E + LG G S I RL+V +Q GS+IG+ G+ IK I+E SGA
Sbjct: 154 --VHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIGRQGATIKAIQEGSGA 211
Query: 112 SVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
V V A++ LP + +R V ++G +V +A+ I + + +P +
Sbjct: 212 IVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRKFLVDRSVLPLFEADRT- 270
Query: 168 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
IGNQ ++ +L G+N + + + G G G+G ++S+
Sbjct: 271 -----IGNQPQIEENLPHQ-SWGHNQSSSVPSSG-----GAGLGN------TQYMSSAFQ 313
Query: 228 KTNHMPRN----QNQNQNQHNRNNRDGPSQKTNQQQN--------QITKEMTVPNELIGA 275
N+ P + ++Q + + RD PS + N Q+T+ M +P A
Sbjct: 314 HDNYYPPSDLPLESQGHHGLSVYGRD-PSLAGHSVANPPPAPVITQVTQHMQIPLSYADA 372
Query: 276 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+IG G I +R+ SGA I + E + T+ + GT + AQ LI
Sbjct: 373 IIGTAGANISYMRRNSGATIAV---QETRGVPGEMTVEIRGTATQVQTAQQLI 422
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 138/343 (40%), Gaps = 74/343 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VGSIIG+ G+ +KK+ EE+ ++I I D T ER V V G
Sbjct: 189 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPP 248
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL------IQLRLIVPASQCGSIIGKG 543
SMD L R I G +GE+ + RL+VPASQ GS+IGK
Sbjct: 249 SMDGLLRVHMRIVD-------------GLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQ 295
Query: 544 GSQIKTIRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQIC----LIMVD 595
G +K I+E S V V S+ LP +R V + G P +V +A+ I +VD
Sbjct: 296 GGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVD 355
Query: 596 SPPKGATIPYRPLPQNAGGPGLIGNQF---GMQNSLMGAPDMGNNPLAGLAALGLGGNSG 652
+ IP+ NQ Q M P P G A S
Sbjct: 356 R----SIIPF------------FENQMQKPTRQMDHMPPPHQSWGPPQGHAP------SV 393
Query: 653 GGMGGGLNAAALAALASSQLKTNHMP--RNQNQNQNQH---NRNNRDGP-----SQKTNQ 702
GG G G N P R + H + R+ P S
Sbjct: 394 GGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPM 453
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 745
Q+T++M +P AVIG G+ I R++SGA + I ++
Sbjct: 454 VAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQET 496
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 135/337 (40%), Gaps = 74/337 (21%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLF 50
++VGSIIG+ G+ +KK+ EE+ ++I I D T ER V V G SMD L
Sbjct: 195 AQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLL 254
Query: 51 RAFSLITKNIEEFHKNQNKHLGGNGESQL------IQLRLIVPASQCGSIIGKGGSQIKT 104
R I G +GE+ + RL+VPASQ GS+IGK G +K
Sbjct: 255 RVHMRIVD-------------GLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKA 301
Query: 105 IRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQIC----LIMVDSPPKGA 156
I+E S V V S+ LP +R V + G P +V +A+ I +VD +
Sbjct: 302 IQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR----S 357
Query: 157 TIPYRPLPQNAGGPGLIGNQF---GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 213
IP+ NQ Q M P P G A S GG G G
Sbjct: 358 IIPF------------FENQMQKPTRQMDHMPPPHQSWGPPQGHAP------SVGGGGYG 399
Query: 214 LNAAALAALASSQLKTNHMP--RNQNQNQNQH---NRNNRDGP-----SQKTNQQQNQIT 263
N P R + H + R+ P S Q+T
Sbjct: 400 HNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVT 459
Query: 264 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
++M +P AVIG G+ I R++SGA + I ++
Sbjct: 460 QQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQET 496
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 132
R++VPA + GSIIG+ G IK I E + A + + D P +TER V + G
Sbjct: 189 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL-DGPPGTTERAVMVSG 238
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 64/353 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSM--DSLF-- 495
R I VG++IGK G V+ L+ ESG+ I + S +R+VT+ S +S +
Sbjct: 115 FRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYSP 174
Query: 496 --RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
+A L+ E + LG E + RL+VP++Q G ++GKGG+ + +R+
Sbjct: 175 AQKAVVLVFSKSVEAGVEKGLELGSKKEP-YVTARLVVPSNQVGCLLGKGGAIVSEMRKA 233
Query: 554 SGASVYV-ASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
+GA++ V +D +P + ++ V I GV V AI+ + D
Sbjct: 234 TGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLFVST-------- 285
Query: 610 QNAGGPGLIGNQF-GMQNSLMGAPDMGNNPLAGLAA----LGLGGNSGGGMGGGLNAAAL 664
QN+GG + + G Q +L + + + L GL A G+ G+ GL +
Sbjct: 286 QNSGGARSLSSVLAGGQPTLAISHSLNRHSLPGLQAPQTVAGINSRGTNGVSRGLIS--- 342
Query: 665 AALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTV----PNELIGA 720
R G + + + I TV P+++IG+
Sbjct: 343 ----------------------------RKGGLELISGSKTAIVTNTTVQIVVPDDVIGS 374
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
V G+ G+ + +R+ISGA + + E ++DRTI ++GTPD AQ L+
Sbjct: 375 VYGENGSNLARLRQISGAKVIV---HEPRPGTSDRTIIISGTPDETRAAQSLL 424
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 154/345 (44%), Gaps = 64/345 (18%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSM--DSLF----RAFSLI 56
VG++IGK G V+ L+ ESG+ I + S +R+VT+ S +S + +A L+
Sbjct: 123 RVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYSPAQKAVVLV 182
Query: 57 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV- 115
E + LG E + RL+VP++Q G ++GKGG+ + +R+ +GA++ V
Sbjct: 183 FSKSVEAGVEKGLELGSKKEP-YVTARLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVI 241
Query: 116 ASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 172
+D +P + ++ V I GV V AI+ + D QN+GG
Sbjct: 242 GNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLFVST--------QNSGGARS 293
Query: 173 IGNQF-GMQNSLMGAPDMGNNPLAGLAA----LGLGGNSGGGMGGGLNAAALAALASSQL 227
+ + G Q +L + + + L GL A G+ G+ GL +
Sbjct: 294 LSSVLAGGQPTLAISHSLNRHSLPGLQAPQTVAGINSRGTNGVSRGLIS----------- 342
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTV----PNELIGAVIGKGGTK 283
R G + + + I TV P+++IG+V G+ G+
Sbjct: 343 --------------------RKGGLELISGSKTAIVTNTTVQIVVPDDVIGSVYGENGSN 382
Query: 284 IFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+ +R+ISGA + + E ++DRTI ++GTPD AQ L+
Sbjct: 383 LARLRQISGAKVIV---HEPRPGTSDRTIIISGTPDETRAAQSLL 424
Score = 46.6 bits (109), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 38/257 (14%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE--EDSNDRTIT 313
++++ +T + VP+ +G ++GKGG + E+RK +GA IR+ + + ND+ +
Sbjct: 199 SKKEPYVTARLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDQVPMCVSDNDQLVQ 258
Query: 314 MTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPL 373
++G + Q I+ + LR +L F S N + L S+ L
Sbjct: 259 ISGVFSNV---QAAIHNATGRLRDHL------------FVSTQNSGGARSL-----SSVL 298
Query: 374 AAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVP--QGPNYA 431
A P LA ++ ++L L A ++ + G++G G GG+ G A
Sbjct: 299 AGGQPTLA--ISHSLNRHSLPGLQAPQTVAGINSRGTNGVSRGLISRKGGLELISGSKTA 356
Query: 432 NIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG 489
+ T VQ ++ +GS+ G++G + +LR+ SG+K+ + + T +R + + G
Sbjct: 357 IVTNTTVQI----VVPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISG 412
Query: 490 SMD------SLFRAFSL 500
+ D SL +AF L
Sbjct: 413 TPDETRAAQSLLQAFIL 429
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
Q ++T + N+ +GAVIGKGG+ + ++ SGA+I + S E E DR +T+T +
Sbjct: 110 QQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECE---DRLVTITAS 165
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 704 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
Q ++T + N+ +GAVIGKGG+ + ++ SGA+I + S E E DR +T+T +
Sbjct: 110 QQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECE---DRLVTITAS 165
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VG+IIG+ GE +KK+ EES ++I I D PER V +
Sbjct: 112 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISP 171
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD LFR + IT + +++ G + RL+VPASQ GS+IGK G+ IK+
Sbjct: 172 AMDGLFRVYKRITDGSDGDSGQPERNISNVGPT-----RLLVPASQAGSLIGKQGATIKS 226
Query: 550 IRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC 590
I+++S + V + + LP + +R V I+G P V +A+ I
Sbjct: 227 IQDSSKSIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESIA 269
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLF 50
++VG+IIG+ GE +KK+ EES ++I I D PER V + +MD LF
Sbjct: 118 AQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGLF 177
Query: 51 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
R + IT + +++ G + RL+VPASQ GS+IGK G+ IK+I+++S
Sbjct: 178 RVYKRITDGSDGDSGQPERNISNVGPT-----RLLVPASQAGSLIGKQGATIKSIQDSSK 232
Query: 111 ASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC 145
+ V + + LP + +R V I+G P V +A+ I
Sbjct: 233 SIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESIA 269
>gi|350529341|ref|NP_001123831.2| KH-type splicing regulatory protein [Xenopus (Silurana) tropicalis]
Length = 675
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 22/156 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI--- 60
VG IIG+ GE + K+++ESG K+ IS S PER+V++ GS DS+ +A L+ +
Sbjct: 105 VGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDSVQKAKMLLDDIVARG 164
Query: 61 -----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+FH N N G NG Q I ++PA + G IIGKGG IK ++E +G + +
Sbjct: 165 RGGPPSQFHDNSN---GQNGSLQEI----MIPAGKAGLIIGKGGETIKQLQERAGVKMIL 217
Query: 116 ASDMLPNST-EREVNIKGVPDAVTQAIYQICLIMVD 150
D N+ ++ + I G P V QA C +++D
Sbjct: 218 IQDGSQNTNMDKPLRIVGEPFKVQQA----CEMVMD 249
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 22/156 (14%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI--- 505
VG IIG+ GE + K+++ESG K+ IS S PER+V++ GS DS+ +A L+ +
Sbjct: 105 VGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDSVQKAKMLLDDIVARG 164
Query: 506 -----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+FH N N G NG Q I ++PA + G IIGKGG IK ++E +G + +
Sbjct: 165 RGGPPSQFHDNSN---GQNGSLQEI----MIPAGKAGLIIGKGGETIKQLQERAGVKMIL 217
Query: 561 ASDMLPNST-EREVNIKGVPDAVTQAIYQICLIMVD 595
D N+ ++ + I G P V QA C +++D
Sbjct: 218 IQDGSQNTNMDKPLRIVGEPFKVQQA----CEMVMD 249
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++G+ +KK++ ++G +I D + P++I ++G D A +I+ ++
Sbjct: 286 VGVVIGRNGDMIKKIQNDAGVRIQFKQDDGTGPDKIAHIMGPPDRCEHAARIISDLLQSL 345
Query: 64 H--------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
G ++ +P +CG +IG+GG +K I + +
Sbjct: 346 KTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQT 405
Query: 110 GASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
GA V ++ PN + I+G P + A
Sbjct: 406 GAFVEISRQPPPNGDPNFKMFTIRGNPQQIDHA 438
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++G+ +KK++ ++G +I D + P++I ++G D A +I+ ++
Sbjct: 286 VGVVIGRNGDMIKKIQNDAGVRIQFKQDDGTGPDKIAHIMGPPDRCEHAARIISDLLQSL 345
Query: 509 H--------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
G ++ +P +CG +IG+GG +K I + +
Sbjct: 346 KTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQT 405
Query: 555 GASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
GA V ++ PN + I+G P + A
Sbjct: 406 GAFVEISRQPPPNGDPNFKMFTIRGNPQQIDHA 438
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R +++TG+PD++
Sbjct: 94 MTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDS---GGMPERVVSLTGSPDSV 150
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 357
A+ L++ V G GG S D S+ N
Sbjct: 151 QKAKMLLDDIV------ARGRGGPPSQFHDNSNGQN 180
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R +++TG+PD++
Sbjct: 94 MTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDS---GGMPERVVSLTGSPDSV 150
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 802
A+ L++ V G GG S D S+ N
Sbjct: 151 QKAKMLLDDIV------ARGRGGPPSQFHDNSNGQN 180
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 265 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
EMT +P G VIG+GG + I + +GA + IS+ D N + T+ G P I
Sbjct: 377 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFTIRGNPQQID 436
Query: 323 LAQYLINMSVE 333
A+ LI +E
Sbjct: 437 HAKQLIEEKIE 447
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 710 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
EMT +P G VIG+GG + I + +GA + IS+ D N + T+ G P I
Sbjct: 377 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFTIRGNPQQID 436
Query: 768 LAQYLINMSVE 778
A+ LI +E
Sbjct: 437 HAKQLIEEKIE 447
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G IIGK GET+K+L+E +G K+ + S ++ ++ + ++G + +A ++ +
Sbjct: 192 KAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLL 251
Query: 61 EE-----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
E F +N+ G G + + VP G +IG+ G IK I+ +G +
Sbjct: 252 RERDQANFDRNEYGSR-GGGGGGGGGIDVPVPRHSVGVVIGRNGDMIKKIQNDAGVRIQF 310
Query: 116 ASDMLPNST--EREVNIKGVPDAVTQA 140
D + T ++ +I G PD A
Sbjct: 311 KQD---DGTGPDKIAHIMGPPDRCEHA 334
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITKNI 505
+ G IIGK GET+K+L+E +G K+ + S ++ ++ + ++G + +A ++ +
Sbjct: 192 KAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLL 251
Query: 506 EE-----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
E F +N+ G G + + VP G +IG+ G IK I+ +G +
Sbjct: 252 RERDQANFDRNEYGSR-GGGGGGGGGIDVPVPRHSVGVVIGRNGDMIKKIQNDAGVRIQF 310
Query: 561 ASDMLPNST--EREVNIKGVPDAVTQA 585
D + T ++ +I G PD A
Sbjct: 311 KQD---DGTGPDKIAHIMGPPDRCEHA 334
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP G IIG+GG QI I++ SG V ++ D +P ER V++ G PD+V +A
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP---ERVVSLTGSPDSVQKA 153
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 585
VP G IIG+GG QI I++ SG V ++ D +P ER V++ G PD+V +A
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP---ERVVSLTGSPDSVQKA 153
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 138/343 (40%), Gaps = 74/343 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VGSIIG+ G+ +KK+ EE+ ++I I D T ER V V G
Sbjct: 189 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPP 248
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL------IQLRLIVPASQCGSIIGKG 543
SMD L R I G +GE+ + RL+VPASQ GS+IGK
Sbjct: 249 SMDGLLRVHMRIVD-------------GLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQ 295
Query: 544 GSQIKTIRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQIC----LIMVD 595
G +K I+E S V V S+ LP +R V + G P +V +A+ I +VD
Sbjct: 296 GGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVD 355
Query: 596 SPPKGATIPYRPLPQNAGGPGLIGNQF---GMQNSLMGAPDMGNNPLAGLAALGLGGNSG 652
+ IP+ NQ Q M P P G A S
Sbjct: 356 R----SIIPF------------FENQMQKPTRQMDHMPPPHQSWGPPQGHAP------SV 393
Query: 653 GGMGGGLNAAALAALASSQLKTNHMP--RNQNQNQNQH---NRNNRDGP-----SQKTNQ 702
GG G G N P R + H + R+ P S
Sbjct: 394 GGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPM 453
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 745
Q+T++M +P AVIG G+ I R++SGA + I ++
Sbjct: 454 VAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQET 496
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 135/337 (40%), Gaps = 74/337 (21%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLF 50
++VGSIIG+ G+ +KK+ EE+ ++I I D T ER V V G SMD L
Sbjct: 195 AQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLL 254
Query: 51 RAFSLITKNIEEFHKNQNKHLGGNGESQL------IQLRLIVPASQCGSIIGKGGSQIKT 104
R I G +GE+ + RL+VPASQ GS+IGK G +K
Sbjct: 255 RVHMRIVD-------------GLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKA 301
Query: 105 IRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQIC----LIMVDSPPKGA 156
I+E S V V S+ LP +R V + G P +V +A+ I +VD +
Sbjct: 302 IQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR----S 357
Query: 157 TIPYRPLPQNAGGPGLIGNQF---GMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 213
IP+ NQ Q M P P G A S GG G G
Sbjct: 358 IIPF------------FENQMQKPTRQMDHMPPPHQSWGPPQGHAP------SVGGGGYG 399
Query: 214 LNAAALAALASSQLKTNHMP--RNQNQNQNQH---NRNNRDGP-----SQKTNQQQNQIT 263
N P R + H + R+ P S Q+T
Sbjct: 400 HNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVT 459
Query: 264 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
++M +P AVIG G+ I R++SGA + I ++
Sbjct: 460 QQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQET 496
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKG 132
R++VPA + GSIIG+ G IK I E + A + + D P +TER V + G
Sbjct: 189 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL-DGPPGTTERAVMVSG 238
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 13/174 (7%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S+ T ERIV + GS DS
Sbjct: 65 QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDS 124
Query: 494 LFRAFSLITKNIEEF----HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
L + + I + K+ ++ N ++ Q++++VP S G IIGKGG+ IK
Sbjct: 125 LKSVHKFLMEKIGQAPRPPAKSPSEQNANNNRAK--QVKIVVPNSTAGLIIGKGGATIKF 182
Query: 550 IRETSGASVYVASDMLP--NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
I E +G+ V ++ N ER + I G P+ +A I +V+ P G+
Sbjct: 183 IMEQTGSRVQISQKATSGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGS 236
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 13/161 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S+ T ERIV + GS DSL + + I
Sbjct: 78 GSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKSVHKFLMEKIG 137
Query: 62 EF----HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
+ K+ ++ N ++ Q++++VP S G IIGKGG+ IK I E +G+ V ++
Sbjct: 138 QAPRPPAKSPSEQNANNNRAK--QVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQ 195
Query: 118 DMLP--NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 156
N ER + I G P+ +A I +V+ P G+
Sbjct: 196 KATSGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGS 236
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++ SGA I+ISK E +N+R +T+TGTP A A
Sbjct: 430 ELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQTA 489
Query: 325 QYLINMSV---ELLRA 337
QYL+ + E +RA
Sbjct: 490 QYLVRARIAQEEAMRA 505
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++ SGA I+ISK E +N+R +T+TGTP A A
Sbjct: 430 ELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQTA 489
Query: 770 QYLINMSV---ELLRA 782
QYL+ + E +RA
Sbjct: 490 QYLVRARIAQEEAMRA 505
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 62 EFHKNQNKHLGGNG---ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--A 116
E ++ + GG G + QL+ L++++P+ GSIIGKGG I +++ +GA++ + +
Sbjct: 46 EMGNSKRSNFGGEGGPEDGQLL-LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 104
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPK 154
+D P +TER V I G D++ +++++ + + P+
Sbjct: 105 NDFYPGTTERIVVITGSEDSL-KSVHKFLMEKIGQAPR 141
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 271
GG + A + AL + P R+N G + + Q+ ++ +P+
Sbjct: 19 GGTHVAGVPALNVDPTDSRKRPLEGAVEMGNSKRSNFGG---EGGPEDGQLLLKVLIPSY 75
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI-ALAQYLI 328
G++IGKGG I +++K +GA I++SKS++ + +R + +TG+ D++ ++ ++L+
Sbjct: 76 AAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKSVHKFLM 133
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 657 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
GG + A + AL + P R+N G + + Q+ ++ +P+
Sbjct: 19 GGTHVAGVPALNVDPTDSRKRPLEGAVEMGNSKRSNFGG---EGGPEDGQLLLKVLIPSY 75
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI-ALAQYLI 773
G++IGKGG I +++K +GA I++SKS++ + +R + +TG+ D++ ++ ++L+
Sbjct: 76 AAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDSLKSVHKFLM 133
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
K PR ++ ++ N NN K + VPN G +IGKGG I I
Sbjct: 135 KIGQAPRPPAKSPSEQNANNNRAKQVK-----------IVVPNSTAGLIIGKGGATIKFI 183
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA-QYLINMSVE 333
+ +G+ ++IS+ + + +R IT+TG P+ A +++N VE
Sbjct: 184 MEQTGSRVQISQKATSGINLPERVITITGEPEQNDKACAFIVNKIVE 230
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
K PR ++ ++ N NN K + VPN G +IGKGG I I
Sbjct: 135 KIGQAPRPPAKSPSEQNANNNRAKQVK-----------IVVPNSTAGLIIGKGGATIKFI 183
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA-QYLINMSVE 778
+ +G+ ++IS+ + + +R IT+TG P+ A +++N VE
Sbjct: 184 MEQTGSRVQISQKATSGINLPERVITITGEPEQNDKACAFIVNKIVE 230
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIK 131
+G +++L VP + G+I+GKGG + +E SGA + ++ + P + R+V I
Sbjct: 423 DGSKNVVELE--VPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTIT 480
Query: 132 GVPDAVTQAIYQI 144
G P A A Y +
Sbjct: 481 GTPAATQTAQYLV 493
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIK 576
+G +++L VP + G+I+GKGG + +E SGA + ++ + P + R+V I
Sbjct: 423 DGSKNVVELE--VPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTIT 480
Query: 577 GVPDAVTQAIYQI 589
G P A A Y +
Sbjct: 481 GTPAATQTAQYLV 493
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VG+IIG+ GE +KK+ EES ++I I D PER V +
Sbjct: 110 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISP 169
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD LFR + IT + +++ G + RL+VPASQ GS+IGK G+ IK+
Sbjct: 170 AMDGLFRVYKRITDGSDGDSGQPERNISNVGPT-----RLLVPASQAGSLIGKQGATIKS 224
Query: 550 IRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC 590
I+++S + V + + LP + +R V I+G P V +A+ I
Sbjct: 225 IQDSSKSIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESIA 267
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLF 50
++VG+IIG+ GE +KK+ EES ++I I D PER V + +MD LF
Sbjct: 116 AQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGLF 175
Query: 51 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
R + IT + +++ G + RL+VPASQ GS+IGK G+ IK+I+++S
Sbjct: 176 RVYKRITDGSDGDSGQPERNISNVGPT-----RLLVPASQAGSLIGKQGATIKSIQDSSK 230
Query: 111 ASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC 145
+ V + + LP + +R V I+G P V +A+ I
Sbjct: 231 SIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESIA 267
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VG+IIG+ GE +KK+ EES ++I I D PER V +
Sbjct: 110 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISP 169
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD LFR + IT + +++ G + RL+VPASQ GS+IGK G+ IK+
Sbjct: 170 AMDGLFRVYKRITDGSDGDSGQPERNISNVGPT-----RLLVPASQAGSLIGKQGATIKS 224
Query: 550 IRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC 590
I+++S + V + + LP + +R V I+G P V +A+ I
Sbjct: 225 IQDSSKSIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESIA 267
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLF 50
++VG+IIG+ GE +KK+ EES ++I I D PER V + +MD LF
Sbjct: 116 AQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGLF 175
Query: 51 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
R + IT + +++ G + RL+VPASQ GS+IGK G+ IK+I+++S
Sbjct: 176 RVYKRITDGSDGDSGQPERNISNVGPT-----RLLVPASQAGSLIGKQGATIKSIQDSSK 230
Query: 111 ASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC 145
+ V + + LP + +R V I+G P V +A+ I
Sbjct: 231 SIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESIA 267
>gi|348521966|ref|XP_003448497.1| PREDICTED: far upstream element-binding protein 1 [Oreochromis
niloticus]
Length = 631
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 17/154 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE- 62
VG IIG+ GE + +L++ESG KI I+ S P+R VT+ G +S+ A L+T+ +E+
Sbjct: 99 VGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGLPESIQTAKRLLTEIVEKG 158
Query: 63 -----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
FH N +G +Q ++VPAS+ G +IGKGG IK+++E +G + +
Sbjct: 159 RPAPAFHHN-------DGPGMTVQ-EIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQ 210
Query: 118 DMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 150
D N+ ++ + I G P V QA + ++ D
Sbjct: 211 DGPQNTGADKPLRISGEPFKVQQAKEMVMELIRD 244
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 17/154 (11%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE- 507
VG IIG+ GE + +L++ESG KI I+ S P+R VT+ G +S+ A L+T+ +E+
Sbjct: 99 VGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGLPESIQTAKRLLTEIVEKG 158
Query: 508 -----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 562
FH N +G +Q ++VPAS+ G +IGKGG IK+++E +G + +
Sbjct: 159 RPAPAFHHN-------DGPGMTVQ-EIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQ 210
Query: 563 DMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 595
D N+ ++ + I G P V QA + ++ D
Sbjct: 211 DGPQNTGADKPLRISGEPFKVQQAKEMVMELIRD 244
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +TP+RI ++G D A +I+ +
Sbjct: 272 VGIVIGRNGEMIKKIQNDTGVRIQFKPDDGTTPDRIAQIMGPPDQAQHAAEIISDLLRSV 331
Query: 64 H---------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 108
N ++G G L + VP + G IIGKGG IK I +
Sbjct: 332 QAGGPPGHGGGRGRGRGQGNWNMGPPGG--LQEFTFTVPTMKTGLIIGKGGETIKGISQQ 389
Query: 109 SGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
SGA + + + PN+ + ++G P + A
Sbjct: 390 SGARIELQRNPPPNADPNIKMFTVRGSPQQIDYA 423
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 21/154 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +TP+RI ++G D A +I+ +
Sbjct: 272 VGIVIGRNGEMIKKIQNDTGVRIQFKPDDGTTPDRIAQIMGPPDQAQHAAEIISDLLRSV 331
Query: 509 H---------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
N ++G G L + VP + G IIGKGG IK I +
Sbjct: 332 QAGGPPGHGGGRGRGRGQGNWNMGPPGG--LQEFTFTVPTMKTGLIIGKGGETIKGISQQ 389
Query: 554 SGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
SGA + + + PN+ + ++G P + A
Sbjct: 390 SGARIELQRNPPPNADPNIKMFTVRGSPQQIDYA 423
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
++E VP+ ++G +IG+GG +I +++ SG I+I+ S DR++T+TG P++I
Sbjct: 89 SEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDS---GGMPDRSVTLTGLPESIQ 145
Query: 323 LAQYLINMSVELLR 336
A+ L+ VE R
Sbjct: 146 TAKRLLTEIVEKGR 159
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
++E VP+ ++G +IG+GG +I +++ SG I+I+ S DR++T+TG P++I
Sbjct: 89 SEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDS---GGMPDRSVTLTGLPESIQ 145
Query: 768 LAQYLINMSVELLR 781
A+ L+ VE R
Sbjct: 146 TAKRLLTEIVEKGR 159
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 5 EVGSIIGKSGETVKKLREESGSK-IYISD---SSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G +IGK GET+K L+E +G K + I D ++ ++ + + G + +A ++ + I
Sbjct: 183 KAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFKVQQAKEMVMELI 242
Query: 61 EE--FHKNQNKH---LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+ F + + ++ +GG+ L + VP G +IG+ G IK I+ +G +
Sbjct: 243 RDQGFREQRGEYGSRIGGDS------LDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQF 296
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQA 140
D + +R I G PD A
Sbjct: 297 KPDDG-TTPDRIAQIMGPPDQAQHA 320
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP G +IGKGG I I + SGA I + ++ D N + T+ G+P I A+
Sbjct: 365 FTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADPNIKMFTVRGSPQQIDYAR 424
Query: 326 YLINMSV 332
L+ +
Sbjct: 425 QLVEEKI 431
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP G +IGKGG I I + SGA I + ++ D N + T+ G+P I A+
Sbjct: 365 FTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADPNIKMFTVRGSPQQIDYAR 424
Query: 771 YLINMSV 777
L+ +
Sbjct: 425 QLVEEKI 431
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 119/284 (41%), Gaps = 37/284 (13%)
Query: 248 RDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEED 306
R P+ N +E+ VP G VIGKGG I +++ +G M+ I +
Sbjct: 159 RPAPAFHHNDGPGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNT-- 216
Query: 307 SNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGE--SNMDDFSSDNNLPSSAP- 363
D+ + ++G P + A+ M +EL+R E GE S + S D +P A
Sbjct: 217 GADKPLRISGEPFKVQQAK---EMVMELIRDQGFREQRGEYGSRIGGDSLDVPVPRFAVG 273
Query: 364 -LAGLNAS---------------NPLAAALP-QLAQILTKPGALNALTSLSALGGLSDLL 406
+ G N P P ++AQI+ P + +SDLL
Sbjct: 274 IVIGRNGEMIKKIQNDTGVRIQFKPDDGTTPDRIAQIMGPPDQAQHAAEI-----ISDLL 328
Query: 407 GGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLR 466
+GG G+ GG G N+ N+ G + + + G IIGK GET+K +
Sbjct: 329 RSVQAGGPPGHGGGRGRGRGQGNW-NMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGIS 387
Query: 467 EESGSKIYISDSSTPE-----RIVTVIGSMDSLFRAFSLITKNI 505
++SG++I + + P ++ TV GS + A L+ + I
Sbjct: 388 QQSGARIELQRNPPPNADPNIKMFTVRGSPQQIDYARQLVEEKI 431
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 26/181 (14%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVT-------------- 486
R++ K+ GSIIGK GE K++R E+ S + I+++ ER+VT
Sbjct: 14 RYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDD 73
Query: 487 ---VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
V ++D+LF+ ++ + ++ + GE Q + +R++VP+ Q G +IGKG
Sbjct: 74 GELVCPALDALFKVHDMVVADADQ--DDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKG 131
Query: 544 GSQIKTIRETSGASVYVASDMLPN-----STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
G I+ +R + A + V D LP S + + I G P V +A+YQ+ ++ D+P
Sbjct: 132 GQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPS 191
Query: 599 K 599
+
Sbjct: 192 R 192
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 26/175 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVT-----------------VIG 44
K+ GSIIGK GE K++R E+ S + I+++ ER+VT V
Sbjct: 20 KKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCP 79
Query: 45 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
++D+LF+ ++ + ++ + GE Q + +R++VP+ Q G +IGKGG I+
Sbjct: 80 ALDALFKVHDMVVADADQ--DDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQN 137
Query: 105 IRETSGASVYVASDMLPN-----STEREVNIKGVPDAVTQAIYQICLIMVDSPPK 154
+R + A + V D LP S + + I G P V +A+YQ+ ++ D+P +
Sbjct: 138 LRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSR 192
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 17 VKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE 76
+ ++R+E+G+ I ++ S T + + S + S + ++ +G +
Sbjct: 258 INQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDAN 317
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDM--LPNSTEREVNIKG 132
I RL+V +SQ G +IGKGG+ I +R + A++ + D+ + E V I G
Sbjct: 318 DLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITG 377
Query: 133 VPDAVTQAIYQICL 146
PDA +A+ Q+ L
Sbjct: 378 SPDAAMKALTQVIL 391
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 462 VKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE 521
+ ++R+E+G+ I ++ S T + + S + S + ++ +G +
Sbjct: 258 INQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDAN 317
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDM--LPNSTEREVNIKG 577
I RL+V +SQ G +IGKGG+ I +R + A++ + D+ + E V I G
Sbjct: 318 DLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITG 377
Query: 578 VPDAVTQAIYQICL 591
PDA +A+ Q+ L
Sbjct: 378 SPDAAMKALTQVIL 391
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 19/97 (19%)
Query: 252 SQKTNQQQNQ--ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI------SKSSEE 303
S+K + N I+ + V + IG +IGKGG I E+R ++ A IRI K + E
Sbjct: 309 SEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARE 368
Query: 304 EEDSNDRTITMTGTPDAI--ALAQYLINMSVELLRAN 338
+E+ + +TG+PDA AL Q ++ LRAN
Sbjct: 369 DEE----MVQITGSPDAAMKALTQVILR-----LRAN 396
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 19/97 (19%)
Query: 697 SQKTNQQQNQ--ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI------SKSSEE 748
S+K + N I+ + V + IG +IGKGG I E+R ++ A IRI K + E
Sbjct: 309 SEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARE 368
Query: 749 EEDSNDRTITMTGTPDAI--ALAQYLINMSVELLRAN 783
+E+ + +TG+PDA AL Q ++ LRAN
Sbjct: 369 DEE----MVQITGSPDAAMKALTQVILR-----LRAN 396
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 26/181 (14%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVT-------------- 486
R++ K+ GSIIGK GE K++R E+ S + I+++ ER+VT
Sbjct: 22 RYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDD 81
Query: 487 ---VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
V ++D+LF+ ++ + ++ + GE Q + +R++VP+ Q G +IGKG
Sbjct: 82 GELVCPALDALFKVHDMVVADADQ--DDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKG 139
Query: 544 GSQIKTIRETSGASVYVASDMLPN-----STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
G I+ +R + A + V D LP S + + I G P V +A+YQ+ ++ D+P
Sbjct: 140 GQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPS 199
Query: 599 K 599
+
Sbjct: 200 R 200
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 26/175 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVT-----------------VIG 44
K+ GSIIGK GE K++R E+ S + I+++ ER+VT V
Sbjct: 28 KKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCP 87
Query: 45 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
++D+LF+ ++ + ++ + GE Q + +R++VP+ Q G +IGKGG I+
Sbjct: 88 ALDALFKVHDMVVADADQ--DDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQN 145
Query: 105 IRETSGASVYVASDMLPN-----STEREVNIKGVPDAVTQAIYQICLIMVDSPPK 154
+R + A + V D LP S + + I G P V +A+YQ+ ++ D+P +
Sbjct: 146 LRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSR 200
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 17 VKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE 76
+ ++R+E+G+ I ++ S T + + S + S + ++ +G +
Sbjct: 266 INQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDAN 325
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDM--LPNSTEREVNIKG 132
I RL+V +SQ G +IGKGG+ I +R + A++ + D+ + E V I G
Sbjct: 326 DLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITG 385
Query: 133 VPDAVTQAIYQICL 146
PDA +A+ Q+ L
Sbjct: 386 SPDAAMKALTQVIL 399
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 462 VKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGE 521
+ ++R+E+G+ I ++ S T + + S + S + ++ +G +
Sbjct: 266 INQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDAN 325
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDM--LPNSTEREVNIKG 577
I RL+V +SQ G +IGKGG+ I +R + A++ + D+ + E V I G
Sbjct: 326 DLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITG 385
Query: 578 VPDAVTQAIYQICL 591
PDA +A+ Q+ L
Sbjct: 386 SPDAAMKALTQVIL 399
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 17/85 (20%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI------SKSSEEEEDSNDRTITMT 315
I+ + V + IG +IGKGG I E+R ++ A IRI K + E+E+ + +T
Sbjct: 329 ISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEE----MVQIT 384
Query: 316 GTPDAI--ALAQYLINMSVELLRAN 338
G+PDA AL Q ++ LRAN
Sbjct: 385 GSPDAAMKALTQVILR-----LRAN 404
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 17/85 (20%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI------SKSSEEEEDSNDRTITMT 760
I+ + V + IG +IGKGG I E+R ++ A IRI K + E+E+ + +T
Sbjct: 329 ISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEE----MVQIT 384
Query: 761 GTPDAI--ALAQYLINMSVELLRAN 783
G+PDA AL Q ++ LRAN
Sbjct: 385 GSPDAAMKALTQVILR-----LRAN 404
>gi|405969780|gb|EKC34731.1| Far upstream element-binding protein 3 [Crassostrea gigas]
Length = 772
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 31/170 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IGK+G+ +KK+++ESG+K+ D ++PER+ + GS D + A +I + + ++
Sbjct: 406 VGIVIGKNGDMIKKIQQESGAKVQFKADDGNSPERVCAIAGSPDKVQIAAQMIQELLNDY 465
Query: 64 HKNQNKHLGGNGESQLI-----------------------------QLRLIVPASQCGSI 94
++ + G G + + + VPA +CG +
Sbjct: 466 NQREGGMGRGFGGGRGRGGPGRGRGGFGGGPGRGMGRGDGFGGFQDETQFAVPADKCGLV 525
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
IGKGG I+ I + SGA V + PN E+ NIKG PD + AI I
Sbjct: 526 IGKGGETIRQINQQSGAHVELQKHPGPNPNEKLFNIKGGPDQIQHAIQMI 575
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 31/170 (18%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IGK+G+ +KK+++ESG+K+ D ++PER+ + GS D + A +I + + ++
Sbjct: 406 VGIVIGKNGDMIKKIQQESGAKVQFKADDGNSPERVCAIAGSPDKVQIAAQMIQELLNDY 465
Query: 509 HKNQNKHLGGNGESQLI-----------------------------QLRLIVPASQCGSI 539
++ + G G + + + VPA +CG +
Sbjct: 466 NQREGGMGRGFGGGRGRGGPGRGRGGFGGGPGRGMGRGDGFGGFQDETQFAVPADKCGLV 525
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGKGG I+ I + SGA V + PN E+ NIKG PD + AI I
Sbjct: 526 IGKGGETIRQINQQSGAHVELQKHPGPNPNEKLFNIKGGPDQIQHAIQMI 575
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSL 494
Q + ++ G +VG +IGK GET+K+L+E +G K + I DS+ P E+ + + G
Sbjct: 299 QTVVEMMVPGNKVGLVIGKGGETIKQLQERAGVKMVMIQDSNIPSAAEKPLRISGDPQKC 358
Query: 495 FRAFSLITKNI-EEFHKNQNKHLGGNGESQLIQ-----LRLIVPASQCGSIIGKGGSQIK 548
RA ++ + E+ +N NK G + + VP + G +IGK G IK
Sbjct: 359 QRAKEMVLDLLAEKEMENMNKGFNDYGSYGGGGGGGPPMEIPVPRTAVGIVIGKNGDMIK 418
Query: 549 TIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
I++ SGA V +D NS ER I G PD V A I ++ D
Sbjct: 419 KIQQESGAKVQFKAD-DGNSPERVCAIAGSPDKVQIAAQMIQELLND 464
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSLITK 58
G +VG +IGK GET+K+L+E +G K + I DS+ P E+ + + G RA ++
Sbjct: 308 GNKVGLVIGKGGETIKQLQERAGVKMVMIQDSNIPSAAEKPLRISGDPQKCQRAKEMVLD 367
Query: 59 NI-EEFHKNQNKHLGGNGESQLIQ-----LRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
+ E+ +N NK G + + VP + G +IGK G IK I++ SGA
Sbjct: 368 LLAEKEMENMNKGFNDYGSYGGGGGGGPPMEIPVPRTAVGIVIGKNGDMIKKIQQESGAK 427
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 150
V +D NS ER I G PD V A I ++ D
Sbjct: 428 VQFKAD-DGNSPERVCAIAGSPDKVQIAAQMIQELLND 464
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIGK GE + +L+ E+G KI I+ S P+R T+ GS ++ I I
Sbjct: 202 KMVGLIIGKGGEQITRLQAETGCKIQIAPDGSGMPDRQCTLTGSSGAIAACKQQIQDII- 260
Query: 62 EFHKNQNKHLGGNGESQLIQ----------------------LRLIVPASQCGSIIGKGG 99
NQ G + ++VP ++ G +IGKGG
Sbjct: 261 -MRANQTGGPMMGGMDGNGGGFGGGGGGGGGGGMGNGGGQTVVEMMVPGNKVGLVIGKGG 319
Query: 100 SQIKTIRETSGASVYVASDM-LPNSTEREVNIKGVPDAVTQA 140
IK ++E +G + + D +P++ E+ + I G P +A
Sbjct: 320 ETIKQLQERAGVKMVMIQDSNIPSAAEKPLRISGDPQKCQRA 361
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIGK GE + +L+ E+G KI I+ S P+R T+ GS ++ I I
Sbjct: 202 KMVGLIIGKGGEQITRLQAETGCKIQIAPDGSGMPDRQCTLTGSSGAIAACKQQIQDII- 260
Query: 507 EFHKNQNKHLGGNGESQLIQ----------------------LRLIVPASQCGSIIGKGG 544
NQ G + ++VP ++ G +IGKGG
Sbjct: 261 -MRANQTGGPMMGGMDGNGGGFGGGGGGGGGGGMGNGGGQTVVEMMVPGNKVGLVIGKGG 319
Query: 545 SQIKTIRETSGASVYVASDM-LPNSTEREVNIKGVPDAVTQA 585
IK ++E +G + + D +P++ E+ + I G P +A
Sbjct: 320 ETIKQLQERAGVKMVMIQDSNIPSAAEKPLRISGDPQKCQRA 361
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+E +P++++G +IGKGG +I ++ +G I+I+ DR T+TG+ AI
Sbjct: 193 VTEEYAIPDKMVGLIIGKGGEQITRLQAETGCKIQIAPDG---SGMPDRQCTLTGSSGAI 249
Query: 322 ALAQYLINMSVELLRAN 338
A + I + +RAN
Sbjct: 250 AACKQQIQDII--MRAN 264
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+E +P++++G +IGKGG +I ++ +G I+I+ DR T+TG+ AI
Sbjct: 193 VTEEYAIPDKMVGLIIGKGGEQITRLQAETGCKIQIAPDG---SGMPDRQCTLTGSSGAI 249
Query: 767 ALAQYLINMSVELLRAN 783
A + I + +RAN
Sbjct: 250 AACKQQIQDII--MRAN 264
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP +G VIGK G I +I++ SGA ++ ++ +S +R + G+PD + +A
Sbjct: 398 EIPVPRTAVGIVIGKNGDMIKKIQQESGAKVQFKA---DDGNSPERVCAIAGSPDKVQIA 454
Query: 325 QYLINMSVELL 335
+I ELL
Sbjct: 455 AQMIQ---ELL 462
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP +G VIGK G I +I++ SGA ++ ++ +S +R + G+PD + +A
Sbjct: 398 EIPVPRTAVGIVIGKNGDMIKKIQQESGAKVQFKA---DDGNSPERVCAIAGSPDKVQIA 454
Query: 770 QYLINMSVELL 780
+I ELL
Sbjct: 455 AQMIQ---ELL 462
>gi|299116281|emb|CBN76089.1| poly(rc) binding protien (Partial) [Ectocarpus siliculosus]
Length = 334
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST------PERIVTVIGSMDSLFR 496
R ++ ++G++IGK G +K +RE SG+K+ ISDS T +R+VT G+ +S+
Sbjct: 104 RVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFNSVQL 163
Query: 497 AFSLITKNIEEFHKNQNKHLG---GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
AF+ I + + + +G G+ + RL++P + G +IG+GG IK IRE
Sbjct: 164 AFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQ 223
Query: 554 SGASVYVASDML 565
SGA + ++S
Sbjct: 224 SGARIEISSHAF 235
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 9/125 (7%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSST------PERIVTVIGSMDSLFRAFSLITK 58
++G++IGK G +K +RE SG+K+ ISDS T +R+VT G+ +S+ AF+ I
Sbjct: 111 KIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFNSVQLAFTHILS 170
Query: 59 NIEEFHKNQNKHLG---GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+ + + +G G+ + RL++P + G +IG+GG IK IRE SGA + +
Sbjct: 171 HAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEI 230
Query: 116 ASDML 120
+S
Sbjct: 231 SSHAF 235
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE-EEDSNDRTITMTGTPDAI 321
+ +PN IGAVIGKGG I IR++SGA + IS S DS+DR +T GT +++
Sbjct: 102 VSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFNSV 161
Query: 322 ALA 324
LA
Sbjct: 162 QLA 164
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE-EEDSNDRTITMTGTPDAI 766
+ +PN IGAVIGKGG I IR++SGA + IS S DS+DR +T GT +++
Sbjct: 102 VSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFNSV 161
Query: 767 ALA 769
LA
Sbjct: 162 QLA 164
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYV---ASDMLPNSTEREVNIKGVPDAVTQ 139
R+++P + G++IGKGG+ IK IRE SGA V + + + +S +R V G ++V
Sbjct: 104 RVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFNSVQL 163
Query: 140 AIYQI 144
A I
Sbjct: 164 AFTHI 168
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 159/349 (45%), Gaps = 65/349 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAF 498
+R ++Q VG+IIG+ G T++++ + S +++ + + E+ +T+ G+ D+ A
Sbjct: 145 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYGNPDNCTNAC 204
Query: 499 SLITKNIEEFHKNQNKHL--GGNGE------SQLIQLRLIVPASQCGSIIGKGGSQIKTI 550
I + +++ N NK G N + S I L+++ + G IIGKGG+ IK I
Sbjct: 205 KKILEVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNLIGRIIGKGGNTIKRI 264
Query: 551 RETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
+ + + V+S D+ + ER + +KG + +++A I + S
Sbjct: 265 MQDTDTKITVSSINDINSFNLERIITVKGTIENMSKAESMISSKLRQSYENDLQA---MA 321
Query: 609 PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL- 667
PQ+ PGL +P+A ++ G+G +S G GL + A
Sbjct: 322 PQSMMFPGL-------------------HPMAMMSTAGMGYSS---RGPGLYGSGPAPYP 359
Query: 668 ASSQLKTNH-MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
S L+T +P + Q T + +PN +GA+IG G
Sbjct: 360 YQSSLQTQQGVPASDTQE-----------------------TTFLYIPNNSVGAIIGTKG 396
Query: 727 TKIFEIRKISGAMIRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 773
+ I I + SGA ++I+ +++ E +R +T+ G+P++ AQYLI
Sbjct: 397 SHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 445
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 156/345 (45%), Gaps = 65/345 (18%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAFSLIT 57
+Q VG+IIG+ G T++++ + S +++ + + E+ +T+ G+ D+ A I
Sbjct: 149 VQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYGNPDNCTNACKKIL 208
Query: 58 KNIEEFHKNQNKHL--GGNGE------SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
+ +++ N NK G N + S I L+++ + G IIGKGG+ IK I + +
Sbjct: 209 EVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNLIGRIIGKGGNTIKRIMQDT 268
Query: 110 GASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
+ V+S D+ + ER + +KG + +++A I + S PQ+
Sbjct: 269 DTKITVSSINDINSFNLERIITVKGTIENMSKAESMISSKLRQSYENDLQA---MAPQSM 325
Query: 168 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL-ASSQ 226
PGL +P+A ++ G+G +S G GL + A S
Sbjct: 326 MFPGL-------------------HPMAMMSTAGMGYSS---RGPGLYGSGPAPYPYQSS 363
Query: 227 LKTNH-MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIF 285
L+T +P + Q T + +PN +GA+IG G+ I
Sbjct: 364 LQTQQGVPASDTQE-----------------------TTFLYIPNNSVGAIIGTKGSHIR 400
Query: 286 EIRKISGAMIRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 328
I + SGA ++I+ +++ E +R +T+ G+P++ AQYLI
Sbjct: 401 NIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 445
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 66/329 (20%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+IT ++ N LIG +IGKGG I I + + I +S ++ + +R IT+ GT +
Sbjct: 238 EITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGTIEN 297
Query: 321 IALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQL 380
++ A+ +I+ LR S +N+L + AP
Sbjct: 298 MSKAESMISSK---LRQ---------------SYENDLQAMAP----------------- 322
Query: 381 AQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQT----- 435
Q + PG L+ + +S G +G S G G G G P P +++QT
Sbjct: 323 -QSMMFPG-LHPMAMMSTAG-----MGYSSRGPG---LYGSGPAPY-PYQSSLQTQQGVP 371
Query: 436 -TGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTV 487
+ Q + VG+IIG G ++ + SG+ + I+ + P ER VT+
Sbjct: 372 ASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTI 431
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
+GS +S ++A LI F K + + E + + ++VP++Q G IIGKGG +
Sbjct: 432 VGSPESQWKAQYLI------FEKMREEGYVSGTEDVRLTIEILVPSAQVGRIIGKGGQNV 485
Query: 548 KTIRETSGASVYVASDM-LPNSTEREVNI 575
+ ++ +G+ + ++ P S + E +
Sbjct: 486 RELQRVTGSVIKLSEQQATPPSADEETTV 514
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ + P ER VT++GS +S ++A LI
Sbjct: 388 VGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI-- 445
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
F K + + E + + ++VP++Q G IIGKGG ++ ++ +G+ + ++
Sbjct: 446 ----FEKMREEGYVSGTEDVRLTIEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQ 501
Query: 119 M-LPNSTEREVNI 130
P S + E +
Sbjct: 502 QATPPSADEETTV 514
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 71 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
L G+G LR++V + G+IIG+ GS I+ I + S A V V S E+ + I
Sbjct: 134 LPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITI 193
Query: 131 KGVPDAVTQAIYQICLIM 148
G PD T A +I +M
Sbjct: 194 YGNPDNCTNACKKILEVM 211
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 516 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 575
L G+G LR++V + G+IIG+ GS I+ I + S A V V S E+ + I
Sbjct: 134 LPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITI 193
Query: 576 KGVPDAVTQAIYQICLIM 593
G PD T A +I +M
Sbjct: 194 YGNPDNCTNACKKILEVM 211
>gi|213512410|ref|NP_001133499.1| Far upstream element-binding protein 3 [Salmo salar]
gi|209154246|gb|ACI33355.1| Far upstream element-binding protein 3 [Salmo salar]
Length = 557
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 153/364 (42%), Gaps = 68/364 (18%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q+ +T++ VP++++G +IG+GG +I I+ SG I+I+ S DR T+TG
Sbjct: 77 HQRAIMTEDFKVPDKMVGFIIGRGGEQITRIQLESGCKIQIAADS---GGMMDRACTLTG 133
Query: 317 TPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLN-------- 368
+P+ I A+ L++ V+ R NG G S MD S+ + A GL
Sbjct: 134 SPENIEQAKRLLSQIVDRCR---NGP-GFHSEMDSNSAIQEILIPASKVGLVIGKGGDTI 189
Query: 369 --------------ASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGG 414
P+ + +I P + L + +++ G
Sbjct: 190 KQLQERTGVKMMMIQDGPMPTGADKPLRITGDPYKVQQAREL-----VVEIIRDKDQGDF 244
Query: 415 SGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIY 474
+ G FG G + V R I+ G+ +GE +KK++ +SG +I
Sbjct: 245 RASRGDFGSRLGGSSL----DVAVPRFAVGIVIGR--------NGEMIKKIQNDSGVRIQ 292
Query: 475 I--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQ----------------NKHL 516
D +P+RI V+G D A LI + ++ + + ++
Sbjct: 293 FKPDDGISPDRIAQVMGQSDRCQHAVHLINELVQTAQERDGFGSPVGPRGRGRGRGDWNM 352
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE--REVN 574
G G Q ++ +PA +CG +IGKGG IK I + SGA V + + PN+ R +
Sbjct: 353 GAPGGLQ--EVTYSIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRIFS 410
Query: 575 IKGV 578
I+G
Sbjct: 411 IRGT 414
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIG+ GE + +++ ESG KI I+ S +R T+ GS +++ +A L+++ ++
Sbjct: 91 KMVGFIIGRGGEQITRIQLESGCKIQIAADSGGMMDRACTLTGSPENIEQAKRLLSQIVD 150
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 120
H + S + ++ ++PAS+ G +IGKGG IK ++E +G + + D +
Sbjct: 151 RCRNGPGFHSEMDSNSAIQEI--LIPASKVGLVIGKGGDTIKQLQERTGVKMMMIQDGPM 208
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD 150
P ++ + I G P V QA + I+ D
Sbjct: 209 PTGADKPLRITGDPYKVQQARELVVEIIRD 238
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIG+ GE + +++ ESG KI I+ S +R T+ GS +++ +A L+++ ++
Sbjct: 91 KMVGFIIGRGGEQITRIQLESGCKIQIAADSGGMMDRACTLTGSPENIEQAKRLLSQIVD 150
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 565
H + S + ++ ++PAS+ G +IGKGG IK ++E +G + + D +
Sbjct: 151 RCRNGPGFHSEMDSNSAIQEI--LIPASKVGLVIGKGGDTIKQLQERTGVKMMMIQDGPM 208
Query: 566 PNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
P ++ + I G P V QA + I+ D
Sbjct: 209 PTGADKPLRITGDPYKVQQARELVVEIIRD 238
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 22/148 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ +SG +I D +P+RI V+G D A LI + ++
Sbjct: 269 VGIVIGRNGEMIKKIQNDSGVRIQFKPDDGISPDRIAQVMGQSDRCQHAVHLINELVQTA 328
Query: 64 HKNQ----------------NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ + ++G G Q ++ +PA +CG +IGKGG IK I +
Sbjct: 329 QERDGFGSPVGPRGRGRGRGDWNMGAPGGLQ--EVTYSIPADKCGLVIGKGGETIKNINQ 386
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGV 133
SGA V + + PN+ R +I+G
Sbjct: 387 QSGAHVELQRNPPPNTDPNVRIFSIRGT 414
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q+ +T++ VP++++G +IG+GG +I I+ SG I+I+ S DR T+TG
Sbjct: 77 HQRAIMTEDFKVPDKMVGFIIGRGGEQITRIQLESGCKIQIAADS---GGMMDRACTLTG 133
Query: 762 TPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGL 812
+P+ I A+ L++ V+ R NG G S MD S+ + A GL
Sbjct: 134 SPENIEQAKRLLSQIVDRCR---NGP-GFHSEMDSNSAIQEILIPASKVGL 180
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 248 RDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 307
R+GP + N +E+ +P +G VIGKGG I ++++ +G + + + +
Sbjct: 153 RNGPGFHSEMDSNSAIQEILIPASKVGLVIGKGGDTIKQLQERTGVKMMMIQDGPMPTGA 212
Query: 308 NDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSS-------DNNLPS 360
D+ + +TG P + A+ L+ VE++R G+ ++ DF S D +P
Sbjct: 213 -DKPLRITGDPYKVQQARELV---VEIIRDKDQGD--FRASRGDFGSRLGGSSLDVAVPR 266
Query: 361 SAP--LAGLNAS---------------NPLAAALP-QLAQILTKPGALNALTSLSALGGL 402
A + G N P P ++AQ++ + L +
Sbjct: 267 FAVGIVIGRNGEMIKKIQNDSGVRIQFKPDDGISPDRIAQVMGQSDRCQHAVHL-----I 321
Query: 403 SDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETV 462
++L+ G G+ G G +G N+ G + + + + + G +IGK GET+
Sbjct: 322 NELVQTAQERDGFGSPVGPRGRGRGRGDWNMGAPGGLQEVTYSIPADKCGLVIGKGGETI 381
Query: 463 KKLREESGSKIYISDSSTPE-----RIVTVIGSMDSLFRAFSLITKNI 505
K + ++SG+ + + + P RI ++ G+ + A LI + I
Sbjct: 382 KNINQQSGAHVELQRNPPPNTDPNVRIFSIRGTHQQMEMARQLIDEKI 429
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 712 TVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQY 771
++P + G VIGKGG I I + SGA + + ++ D N R ++ GT + +A+
Sbjct: 364 SIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRIFSIRGTHQQMEMARQ 423
Query: 772 LINMSV 777
LI+ +
Sbjct: 424 LIDEKI 429
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 693 RDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS 752
R+GP + N +E+ +P +G VIGKGG I ++++ +G + + + +
Sbjct: 153 RNGPGFHSEMDSNSAIQEILIPASKVGLVIGKGGDTIKQLQERTGVKMMMIQDGPMPTGA 212
Query: 753 NDRTITMTGTPDAIALAQYLINMSVELLRANLNGE 787
D+ + +TG P + A+ L+ VE++R G+
Sbjct: 213 -DKPLRITGDPYKVQQARELV---VEIIRDKDQGD 243
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 153/343 (44%), Gaps = 45/343 (13%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVT 486
N + TT V R+ + VG+IIGKSG +K L+E +G+KI I D+ +P+R++
Sbjct: 16 NRSRPYTTHVTFRL--LCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVIL 73
Query: 487 V----IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
V S + A + K + + G +++ RL+ SQ G++IGK
Sbjct: 74 VSAPAAASDGEVSTAQVALLKVFDRVLDVAAETAGTEVGDRVVSCRLLADTSQVGAVIGK 133
Query: 543 GGSQIKTIRETSGASVYVASDMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDSPPK 599
G ++ IR +G + V ++ LP T + V ++G +V +A+ + + D PP
Sbjct: 134 AGKVVEKIRMDTGCKIRVLNEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQDCPPP 193
Query: 600 GATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGL 659
T G ++ + + + PL L L +
Sbjct: 194 DRT-----------------KMTGSRHYEVVRSETCSVPLESLTNLHIDRRLQ------- 229
Query: 660 NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 719
++ L+ L++ ++N + + NR + P K QQ ++T + N+ +G
Sbjct: 230 RSSTLSTLSN---RSNGNASGAPKLSAEVNRVSALDP--KALQQ--EVTFRIICSNDRVG 282
Query: 720 AVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
AVIGKGG+ + ++ SGA+I S E E DR +T+T +
Sbjct: 283 AVIGKGGSIVRALQNESGAIISFGPSLVECE---DRLVTITAS 322
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 43/326 (13%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTV----IGSMDSLFRAFS 54
VG+IIGKSG +K L+E +G+KI I D+ +P+R++ V S + A
Sbjct: 31 CHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPAAASDGEVSTAQV 90
Query: 55 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
+ K + + G +++ RL+ SQ G++IGK G ++ IR +G +
Sbjct: 91 ALLKVFDRVLDVAAETAGTEVGDRVVSCRLLADTSQVGAVIGKAGKVVEKIRMDTGCKIR 150
Query: 115 VASDMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 171
V ++ LP T + V ++G +V +A+ + + D PP T
Sbjct: 151 VLNEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQDCPPPDRT-------------- 196
Query: 172 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 231
G ++ + + + PL L L + ++ L+ L++ ++N
Sbjct: 197 ---KMTGSRHYEVVRSETCSVPLESLTNLHIDRRLQ-------RSSTLSTLSN---RSNG 243
Query: 232 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
+ + NR + P K QQ ++T + N+ +GAVIGKGG+ + ++ S
Sbjct: 244 NASGAPKLSAEVNRVSALDP--KALQQ--EVTFRIICSNDRVGAVIGKGGSIVRALQNES 299
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGT 317
GA+I S E E DR +T+T +
Sbjct: 300 GAIISFGPSLVECE---DRLVTITAS 322
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 149/354 (42%), Gaps = 65/354 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSM---DSLF- 495
R I VG++IGK G V+ L+ ESG+ I S +R+VT+ S +S +
Sbjct: 272 FRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTITASEQNPESRYS 331
Query: 496 ---RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+A L+ E + +G ES + +L+VP++Q G ++GKGG+ + +R+
Sbjct: 332 PAQKAVVLVFSKSVEAGVEKGLDMGSKKES-YVTAQLVVPSNQVGCLLGKGGAIVSEMRK 390
Query: 553 TSGASVYV-ASDMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 608
+GA++ V +D +P ++ V I G V AIY
Sbjct: 391 ATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIY--------------------- 429
Query: 609 PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALA 668
NA G L N F + GA L+++ GG + LN +L L
Sbjct: 430 --NATG-RLRDNLFVSTQNSGGA--------RSLSSVLSGGKPTVAVSLSLNRHSLPGLQ 478
Query: 669 SSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK-----TNQQQNQITKEMTVPNELIGAVIG 723
+ Q N N +R SQK + + I TV + VIG
Sbjct: 479 APQTVAGI-------NSRVTNGVSRGLTSQKGGLELVSGSKTAIVTNTTVQIAVPDDVIG 531
Query: 724 ----KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+ G+ + +R+ISGA + + E ++DRTI ++GTPD AQ L+
Sbjct: 532 SVYGENGSNLARLRQISGAKVIV---HEPRPGTSDRTIIISGTPDETRAAQSLL 582
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 147/346 (42%), Gaps = 65/346 (18%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSM---DSLF----RAFSL 55
VG++IGK G V+ L+ ESG+ I S +R+VT+ S +S + +A L
Sbjct: 280 RVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTITASEQNPESRYSPAQKAVVL 339
Query: 56 ITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+ E + +G ES + +L+VP++Q G ++GKGG+ + +R+ +GA++ V
Sbjct: 340 VFSKSVEAGVEKGLDMGSKKES-YVTAQLVVPSNQVGCLLGKGGAIVSEMRKATGANIRV 398
Query: 116 -ASDMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 171
+D +P ++ V I G V AIY NA G
Sbjct: 399 IGNDKVPKCVSDNDQLVQISGEFSNVQAAIY-----------------------NATG-R 434
Query: 172 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 231
L N F + GA L+++ GG + LN +L L + Q
Sbjct: 435 LRDNLFVSTQNSGGA--------RSLSSVLSGGKPTVAVSLSLNRHSLPGLQAPQTVAGI 486
Query: 232 MPRNQNQNQNQHNRNNRDGPSQK-----TNQQQNQITKEMTVPNELIGAVIG----KGGT 282
N N +R SQK + + I TV + VIG + G+
Sbjct: 487 -------NSRVTNGVSRGLTSQKGGLELVSGSKTAIVTNTTVQIAVPDDVIGSVYGENGS 539
Query: 283 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+ +R+ISGA + + E ++DRTI ++GTPD AQ L+
Sbjct: 540 NLARLRQISGAKVIV---HEPRPGTSDRTIIISGTPDETRAAQSLL 582
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 38/257 (14%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI---SKSSEEEEDSNDRTI 312
+++++ +T ++ VP+ +G ++GKGG + E+RK +GA IR+ K + D ND+ +
Sbjct: 357 SKKESYVTAQLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDKVPKCVSD-NDQLV 415
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
++G + A Y N G N+ F S N + L S+
Sbjct: 416 QISGEFSNVQAAIY-------------NATGRLRDNL--FVSTQNSGGARSL-----SSV 455
Query: 373 LAAALPQLAQILT-KPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYA 431
L+ P +A L+ +L L + + G++ + G S G + GG V G A
Sbjct: 456 LSGGKPTVAVSLSLNRHSLPGLQAPQTVAGINSRVTNGVSRGLTSQKGGLELV-SGSKTA 514
Query: 432 NIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG 489
+ T VQ + +GS+ G++G + +LR+ SG+K+ + + T +R + + G
Sbjct: 515 IVTNTTVQ----IAVPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISG 570
Query: 490 SMD------SLFRAFSL 500
+ D SL +AF L
Sbjct: 571 TPDETRAAQSLLQAFIL 587
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREV 128
+ RL+ AS+ G+IIGK G IKT++E +GA + + D P+S +R +
Sbjct: 25 VTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRI-EDAPPDSPDRVI 72
>gi|29841300|gb|AAP06332.1| similar to GenBank Accession Number X72727 transformation
upregulated nuclear protein in Homo sapiens [Schistosoma
japonicum]
Length = 265
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ +
Sbjct: 29 IRFLIPGRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDV 88
Query: 502 TKNIEEF---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSII 540
+++ +N++ + + +I R++V SQ GS+I
Sbjct: 89 CPKLKDIMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVI 148
Query: 541 GKGGSQIKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQI 589
G+GG +IK +R+ V ML P ST+R V + PD V Q + +
Sbjct: 149 GRGGERIKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAV 198
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
G+ G +IGK GE +KK+R + K+ I DS PERI+T+ G + ++ + +++
Sbjct: 35 GRAAGIMIGKGGENIKKIRSQYNVKLNIPDSRGPERIMTIEGDLQAICSIMRDVCPKLKD 94
Query: 63 F---------------------HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
+N++ + + +I R++V SQ GS+IG+GG +
Sbjct: 95 IMNAKLSDPKRIMGTQGARRRPRRNEDPERDDDEDENMIDFRILVHESQAGSVIGRGGER 154
Query: 102 IKTIRETSGASVYVASDML-PNSTEREVNIKGVPDAVTQAIYQI 144
IK +R+ V ML P ST+R V + PD V Q + +
Sbjct: 155 IKDLRDKYKMRVIKVYQMLAPLSTDRVVQMVADPDNVVQCLRAV 198
>gi|221122019|ref|XP_002164819.1| PREDICTED: RNA-binding protein Nova-1-like [Hydra magnipapillata]
Length = 400
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 160/341 (46%), Gaps = 27/341 (7%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
G+IIGK G + +L+ G+KI +S + T ERIV + G + + + I I+
Sbjct: 57 GAIIGKGGANIGELQSRYGAKIRLSPNGEFYPGTEERIVILTGDVSQIIDLHNYI---ID 113
Query: 62 EFHKNQNKH-LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-SDM 119
+ H + + G E + +++++ P + G +IG+GGS IK+++E + A + ++ D
Sbjct: 114 KVHADSMEGPKGMRDEDRGQKVKIVCPNATAGLVIGRGGSTIKSLQEETKAKIMISGRDE 173
Query: 120 LPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFG 178
ER + I G + +A Q+ I D+ + + L + G N G
Sbjct: 174 SKVMGERIITIAGNTEQRIEASRQVIGKIAADAE----NMSNKNLTYSGSGR----NSNG 225
Query: 179 MQN-SLMGAPDMGNNPLAGLAALG-LGGN-----SGGGMGGGLNAAALAALASSQLKTNH 231
+ N S +G D+G +ALG + GN + L LA L+ S L
Sbjct: 226 VSNYSHLGNNDIGQTLQGSFSALGSMLGNLQHNQKSQQLLSSLTQNPLALLSQSGLANQL 285
Query: 232 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 291
+ + + ++ S TNQ + ++ +M +P+ L+GA++GK G + E + S
Sbjct: 286 GLGGGSNSGGGFGQMGQNFGS-VTNQIKTTVSIQMEIPDVLVGAILGKHGKTVHEFIQFS 344
Query: 292 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
GA I+ S ++ + DR +T+ G + +A +LIN +
Sbjct: 345 GAKIQFSAKNDFAPGTTDRILTIQGDLNQTQIAYFLINQKI 385
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 160/341 (46%), Gaps = 27/341 (7%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
G+IIGK G + +L+ G+KI +S + T ERIV + G + + + I I+
Sbjct: 57 GAIIGKGGANIGELQSRYGAKIRLSPNGEFYPGTEERIVILTGDVSQIIDLHNYI---ID 113
Query: 507 EFHKNQNKH-LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-SDM 564
+ H + + G E + +++++ P + G +IG+GGS IK+++E + A + ++ D
Sbjct: 114 KVHADSMEGPKGMRDEDRGQKVKIVCPNATAGLVIGRGGSTIKSLQEETKAKIMISGRDE 173
Query: 565 LPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFG 623
ER + I G + +A Q+ I D+ + + L + G N G
Sbjct: 174 SKVMGERIITIAGNTEQRIEASRQVIGKIAADAE----NMSNKNLTYSGSGR----NSNG 225
Query: 624 MQN-SLMGAPDMGNNPLAGLAALG-LGGN-----SGGGMGGGLNAAALAALASSQLKTNH 676
+ N S +G D+G +ALG + GN + L LA L+ S L
Sbjct: 226 VSNYSHLGNNDIGQTLQGSFSALGSMLGNLQHNQKSQQLLSSLTQNPLALLSQSGLANQL 285
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
+ + + ++ S TNQ + ++ +M +P+ L+GA++GK G + E + S
Sbjct: 286 GLGGGSNSGGGFGQMGQNFGS-VTNQIKTTVSIQMEIPDVLVGAILGKHGKTVHEFIQFS 344
Query: 737 GAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
GA I+ S ++ + DR +T+ G + +A +LIN +
Sbjct: 345 GAKIQFSAKNDFAPGTTDRILTIQGDLNQTQIAYFLINQKI 385
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 252 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 311
S++T+ + + K + +PN GA+IGKGG I E++ GA IR+S + E + +R
Sbjct: 36 SKRTHTESTPLLK-VLIPNYAAGAIIGKGGANIGELQSRYGAKIRLSPNGEFYPGTEERI 94
Query: 312 ITMTG-TPDAIALAQYLIN 329
+ +TG I L Y+I+
Sbjct: 95 VILTGDVSQIIDLHNYIID 113
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 697 SQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRT 756
S++T+ + + K + +PN GA+IGKGG I E++ GA IR+S + E + +R
Sbjct: 36 SKRTHTESTPLLK-VLIPNYAAGAIIGKGGANIGELQSRYGAKIRLSPNGEFYPGTEERI 94
Query: 757 ITMTG-TPDAIALAQYLIN 774
+ +TG I L Y+I+
Sbjct: 95 VILTGDVSQIIDLHNYIID 113
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 38/280 (13%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
+GP ++ + Q K + PN G VIG+GG+ I +++ + A I IS +E +
Sbjct: 121 EGPKGMRDEDRGQKVK-IVCPNATAGLVIGRGGSTIKSLQEETKAKIMIS-GRDESKVMG 178
Query: 309 DRTITMTG-TPDAIALAQYLI--------NMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+R IT+ G T I ++ +I NMS + L +G G + + ++S N
Sbjct: 179 ERIITIAGNTEQRIEASRQVIGKIAADAENMSNKNL--TYSGSGRNSNGVSNYSHLGNND 236
Query: 360 SSAPLAGLNASNPLAAALPQLAQILTKPGALNALT----SLSALGGLSDLLGGGSSGGGS 415
L G + + L + L L L++LT +L + GL++ G G
Sbjct: 237 IGQTLQG--SFSALGSMLGNLQHNQKSQQLLSSLTQNPLALLSQSGLAN-----QLGLGG 289
Query: 416 GNSGGFGGVPQGPNYANIQ-----TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESG 470
G++ G G G N+ ++ T +Q + ++ VG+I+GK G+TV + + SG
Sbjct: 290 GSNSGGGFGQMGQNFGSVTNQIKTTVSIQMEIPDVL----VGAILGKHGKTVHEFIQFSG 345
Query: 471 SKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 505
+KI S + T +RI+T+ G ++ A+ LI + I
Sbjct: 346 AKIQFSAKNDFAPGTTDRILTIQGDLNQTQIAYFLINQKI 385
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 160/379 (42%), Gaps = 63/379 (16%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSM----------------- 46
VG +IGKSG+ + +R + +KI + D +R++T+ S+
Sbjct: 47 VGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPL 106
Query: 47 ----DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 102
D+L + + I + EE + N N E RL+VP SQ S+IGK G I
Sbjct: 107 CCAQDALLKVYDAIVASDEENNTKTNVDRDDNKE-----CRLLVPFSQSSSLIGKAGENI 161
Query: 103 KTIRETSGASVYVASDMLPNST-------EREVNIKGVPDAVTQAIYQICLIMVDSPPKG 155
K IR + ASV V S + + + + V I G P++V QA++ + IM P+
Sbjct: 162 KRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPR- 220
Query: 156 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 215
IP Q+ +I + NS+ +N L G G+ N
Sbjct: 221 ENIPLDSTSQDVPAASVIVPS-DLSNSVYPQTGFYSNQDHIL-------QQGAGVPSYFN 272
Query: 216 AAALAALA-SSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 274
A +++ ++ N +P + H G S ++ ++ ++ P I
Sbjct: 273 ALSVSDFQGYAETAANPVPVFASSLPVTHGF----GGSSRS----EELVFKVLCPLCNIM 324
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDSNDRTITMTGTPDAIALAQYLINMSVE 333
VIGKGG+ I IR+ SG+ I ++ S + +D +T T +PD + +M+VE
Sbjct: 325 RVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMK------SMAVE 378
Query: 334 ---LLRANLNGEGGGESNM 349
LL+ +N E M
Sbjct: 379 AVLLLQEYINDEDAENVKM 397
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 160/379 (42%), Gaps = 63/379 (16%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSM----------------- 491
VG +IGKSG+ + +R + +KI + D +R++T+ S+
Sbjct: 47 VGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPL 106
Query: 492 ----DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
D+L + + I + EE + N N E RL+VP SQ S+IGK G I
Sbjct: 107 CCAQDALLKVYDAIVASDEENNTKTNVDRDDNKE-----CRLLVPFSQSSSLIGKAGENI 161
Query: 548 KTIRETSGASVYVASDMLPNST-------EREVNIKGVPDAVTQAIYQICLIMVDSPPKG 600
K IR + ASV V S + + + + V I G P++V QA++ + IM P+
Sbjct: 162 KRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPR- 220
Query: 601 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 660
IP Q+ +I + NS+ +N L G G+ N
Sbjct: 221 ENIPLDSTSQDVPAASVIVPS-DLSNSVYPQTGFYSNQDHIL-------QQGAGVPSYFN 272
Query: 661 AAALAALA-SSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 719
A +++ ++ N +P + H G S ++ ++ ++ P I
Sbjct: 273 ALSVSDFQGYAETAANPVPVFASSLPVTHGF----GGSSRS----EELVFKVLCPLCNIM 324
Query: 720 AVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDSNDRTITMTGTPDAIALAQYLINMSVE 778
VIGKGG+ I IR+ SG+ I ++ S + +D +T T +PD + +M+VE
Sbjct: 325 RVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMK------SMAVE 378
Query: 779 ---LLRANLNGEGGGESNM 794
LL+ +N E M
Sbjct: 379 AVLLLQEYINDEDAENVKM 397
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 152/355 (42%), Gaps = 44/355 (12%)
Query: 254 KTNQQQNQITKE--MTVPNELIGAVIGKGGTKIFEIRKISGAMIRI-----SKSSEEEED 306
KTN ++ KE + VP ++IGK G I IR+ + A +++ S S
Sbjct: 130 KTNVDRDD-NKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAM 188
Query: 307 SNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAG 366
D + ++G P+++ Q L +S + + N N+ S+ ++P+++ +
Sbjct: 189 EYDNVVVISGEPESVK--QALFAVSAIMYKIN------PRENIPLDSTSQDVPAASVIVP 240
Query: 367 LNASN---PLAAALPQLAQILTK----PGALNALTSLSALGGLSDLLGGGSSGGGSG--N 417
+ SN P IL + P NAL S+S G ++ S
Sbjct: 241 SDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNAL-SVSDFQGYAETAANPVPVFASSLPV 299
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
+ GFGG + + MR +IGK G T+K++RE SGS I ++D
Sbjct: 300 THGFGGSSRSEELVFKVLCPLCNIMR----------VIGKGGSTIKRIREASGSCIEVND 349
Query: 478 SSTP---ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPAS 534
S T + V ++ + +S S+ + + + N N ++++L+V +
Sbjct: 350 SRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEN-----VKMQLLVSSK 404
Query: 535 QCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
G +IGK GS I IR+ + A++ ++ + E + V DA+ Q + ++
Sbjct: 405 VIGCVIGKSGSVINEIRKRTNANICISKGKKDDLVEVSGEVSSVRDALIQIVLRL 459
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
+IGK G T+K++RE SGS I ++DS T + V ++ + +S S+ + + +
Sbjct: 326 VIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQE 385
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
N N ++++L+V + G +IGK GS I IR+ + A++ ++ + E
Sbjct: 386 YINDEDAEN-----VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKKDDLVE 440
Query: 126 REVNIKGVPDAVTQAIYQI 144
+ V DA+ Q + ++
Sbjct: 441 VSGEVSSVRDALIQIVLRL 459
>gi|193785510|dbj|BAG50876.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
++E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IA
Sbjct: 83 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI---GNQAEGAGERHVTITGSPVSIA 139
Query: 323 LAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
LAQYLI +E ++ GG S+ +D P S PL L + P
Sbjct: 140 LAQYLITACLETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 183
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 9/110 (8%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
++E VPN+LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IA
Sbjct: 83 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI---GNQAEGAGERHVTITGSPVSIA 139
Query: 768 LAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
LAQYLI +E ++ GG S+ +D P S PL L + P
Sbjct: 140 LAQYLITACLETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 183
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
GGN + LRL++PASQCGS+IGK G++IK IRE +
Sbjct: 17 GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIREVT 54
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
GGN + LRL++PASQCGS+IGK G++IK IRE +
Sbjct: 17 GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIREVT 54
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 43/199 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++ + GS+IGK+G +K++RE + + +S + P +V+ +D
Sbjct: 27 LRLVIPASQCGSLIGKAGTKIKEIREVTKLQ-QLSSHAVPFATPSVVPGLDP-------- 77
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
G SQ +VP G +IG+ GS+I IR+ SGA + +
Sbjct: 78 ---------------GTQTSSQ----EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG 118
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQN 611
+ + ER V I G P ++ A Y I CL S P P+ P P
Sbjct: 119 -NQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLT 176
Query: 612 A---GGPGLIGNQFGMQNS 627
A PGL+G + + S
Sbjct: 177 ALPTAPPGLLGTPYAISLS 195
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 43/195 (22%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ + GS+IGK+G +K++RE + + +S + P +V+ +D
Sbjct: 31 IPASQCGSLIGKAGTKIKEIREVTKLQ-QLSSHAVPFATPSVVPGLDP------------ 77
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
G SQ +VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 78 -----------GTQTSSQ----EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQA 121
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA--- 167
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 122 EGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPT 180
Query: 168 GGPGLIGNQFGMQNS 182
PGL+G + + S
Sbjct: 181 APPGLLGTPYAISLS 195
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 175/404 (43%), Gaps = 77/404 (19%)
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
++ Q ++ G S + Q+Q M VP + +GA+IGK G I I K + + + I
Sbjct: 21 SREQDSQPGTSGSSLGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIH 80
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLI---------------NMSVELLRAN----- 338
+ +E + ++ IT+ TP+ + A ++I ++ +++L N
Sbjct: 81 R--KENAGAAEKPITIHSTPEGCSTACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGR 138
Query: 339 LNGEGGGESNMDDFSSDNNLPSS-APLAGLNASNP---------LAAALPQLAQILTK-- 386
L G+ G N+ D + + L L NP + A +I+ K
Sbjct: 139 LIGKEG--RNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLR 196
Query: 387 ------PGALNALT------SLSALG----GLSDLL-GGGSSG-------------GGSG 416
A+N + SLSALG GLS L G G G S
Sbjct: 197 EAYENDVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSS 256
Query: 417 NSGGFGGVPQGPNYANIQTTGVQRRMRHI-MQGKEVGSIIGKSGETVKKLREESGSKIYI 475
GG GVP ++ T ++ + ++ + + VG+IIGK G+ +K+L +G+ I I
Sbjct: 257 QLGGLYGVPPASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI 316
Query: 476 SDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVP 532
+ + +P+ R+V + G ++ F+A I F K + ++ E ++ + VP
Sbjct: 317 APAESPDVTQRMVIITGPPEAQFKAQGRI------FGKLKEENFFTAKEEVKLETHIKVP 370
Query: 533 ASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+S G +IGKGG + ++ + A V V D P+ + EV +K
Sbjct: 371 SSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDEND-EVFVK 413
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L +G+ I I+ + +P+ R+V + G ++ F+A I
Sbjct: 292 VGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEAQFKAQGRI------ 345
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + ++ E ++ + VP+S G +IGKGG + ++ + A V V D P+
Sbjct: 346 FGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 405
Query: 123 STEREVNIK 131
+ EV +K
Sbjct: 406 END-EVFVK 413
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 149/347 (42%), Gaps = 68/347 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + + A
Sbjct: 46 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSTAC 105
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I ++ K ++ I L+++ S G +IGK G +K I E + +
Sbjct: 106 HMIMDIMQ-------KEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKI 158
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
++S D+ + ER + +KG +A +A +I + ++ + Q+ PG
Sbjct: 159 TISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQ---QSNLIPG 215
Query: 617 LIGNQFGMQNS-------------LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
L + G+ ++ + P G NP G ++ LGG G G++
Sbjct: 216 LSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSS-QLGGLYGVPPASGIS--- 271
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 723
+QH + P Q+ + +P + +GA+IG
Sbjct: 272 ----------------------HQHTQ----APEQEVVY--------LFIPTQAVGAIIG 297
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
K G I ++ + +GA I+I+ + E D R + +TG P+A AQ
Sbjct: 298 KKGQHIKQLARFAGASIKIAPA--ESPDVTQRMVIITGPPEAQFKAQ 342
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 144/338 (42%), Gaps = 68/338 (20%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + + A +I ++
Sbjct: 55 VGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSTACHMIMDIMQ- 113
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
K ++ I L+++ S G +IGK G +K I E + + ++S D+
Sbjct: 114 ------KEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDLT 167
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
+ ER + +KG +A +A +I + ++ + Q+ PGL + G+
Sbjct: 168 IYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQ---QSNLIPGLSLSALGIF 224
Query: 181 NS-------------LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
++ + P G NP G ++ LGG G G++
Sbjct: 225 STGLSVLPPAAGPRGIPPVPPTGYNPFLGHSS-QLGGLYGVPPASGIS------------ 271
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+QH + P Q+ + +P + +GA+IGK G I ++
Sbjct: 272 -------------HQHTQ----APEQEVVY--------LFIPTQAVGAIIGKKGQHIKQL 306
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +GA I+I+ + E D R + +TG P+A AQ
Sbjct: 307 ARFAGASIKIAPA--ESPDVTQRMVIITGPPEAQFKAQ 342
>gi|270009705|gb|EFA06153.1| hypothetical protein TcasGA2_TC008998 [Tribolium castaneum]
Length = 564
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
G+IIGK GET+ +L++E+G+++ +S S T ER+ + GS+D++ I I
Sbjct: 57 GAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIMVVADFIADKIR 116
Query: 62 EFHKNQNKHLGGNGESQLIQ-----LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
E + K L ES+L+Q ++++VP S G IIGK G+ IK I+ETSG+ V ++
Sbjct: 117 E-KPDLTKPLV-ETESKLMQDRDKQVKILVPNSTAGMIIGKAGNYIKQIKETSGSYVQIS 174
Query: 117 SDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
S ER + + G + QA I +V+ P G +
Sbjct: 175 QKAKDVSLQERCITVIGEKEQNRQACQMILAKIVEDPQSGTCL 217
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
G+IIGK GET+ +L++E+G+++ +S S T ER+ + GS+D++ I I
Sbjct: 57 GAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIMVVADFIADKIR 116
Query: 507 EFHKNQNKHLGGNGESQLIQ-----LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
E + K L ES+L+Q ++++VP S G IIGK G+ IK I+ETSG+ V ++
Sbjct: 117 E-KPDLTKPLV-ETESKLMQDRDKQVKILVPNSTAGMIIGKAGNYIKQIKETSGSYVQIS 174
Query: 562 SDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
S ER + + G + QA I +V+ P G +
Sbjct: 175 QKAKDVSLQERCITVIGEKEQNRQACQMILAKIVEDPQSGTCL 217
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 276 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV--- 332
V G GG + EI+++SGA I+ISK + +R +T+TG+P +I AQYLI +
Sbjct: 489 VAGPGGRSLVEIQQLSGANIQISKKGIFAPGTRNRIVTITGSPQSINTAQYLIEQRISEE 548
Query: 333 ELLRANLNGEG 343
EL RA NG G
Sbjct: 549 ELKRARNNGLG 559
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV--- 777
V G GG + EI+++SGA I+ISK + +R +T+TG+P +I AQYLI +
Sbjct: 489 VAGPGGRSLVEIQQLSGANIQISKKGIFAPGTRNRIVTITGSPQSINTAQYLIEQRISEE 548
Query: 778 ELLRANLNGEG 788
EL RA NG G
Sbjct: 549 ELKRARNNGLG 559
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ VP+ GA+IGKGG I +++K +GA +++SKS + + +R +TG+ DAI +
Sbjct: 48 KVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIMVV 107
Query: 325 QYLI 328
I
Sbjct: 108 ADFI 111
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ VP+ GA+IGKGG I +++K +GA +++SKS + + +R +TG+ DAI +
Sbjct: 48 KVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIMVV 107
Query: 770 QYLI 773
I
Sbjct: 108 ADFI 111
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVN 129
GG+G +++VP+ G+IIGKGG I +++ +GA V ++ D P +TER
Sbjct: 40 GGDGT---YHFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCL 96
Query: 130 IKGVPDAV 137
I G DA+
Sbjct: 97 ITGSVDAI 104
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVN 574
GG+G +++VP+ G+IIGKGG I +++ +GA V ++ D P +TER
Sbjct: 40 GGDGT---YHFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCL 96
Query: 575 IKGVPDAV 582
I G DA+
Sbjct: 97 ITGSVDAI 104
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS----DSSTPERIVTVIGSMDSLF 495
++++ ++ G IIGK+G +K+++E SGS + IS D S ER +TVIG +
Sbjct: 138 KQVKILVPNSTAGMIIGKAGNYIKQIKETSGSYVQISQKAKDVSLQERCITVIGEKEQNR 197
Query: 496 RAFSLITKNIEE 507
+A +I I E
Sbjct: 198 QACQMILAKIVE 209
>gi|189239335|ref|XP_973573.2| PREDICTED: similar to pasilla CG16765-PK [Tribolium castaneum]
Length = 535
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
G+IIGK GET+ +L++E+G+++ +S S T ER+ + GS+D++ I I
Sbjct: 57 GAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIMVVADFIADKIR 116
Query: 62 EFHKNQNKHLGGNGESQLIQ-----LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
E + K L ES+L+Q ++++VP S G IIGK G+ IK I+ETSG+ V ++
Sbjct: 117 E-KPDLTKPLV-ETESKLMQDRDKQVKILVPNSTAGMIIGKAGNYIKQIKETSGSYVQIS 174
Query: 117 SDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
S ER + + G + QA I +V+ P G +
Sbjct: 175 QKAKDVSLQERCITVIGEKEQNRQACQMILAKIVEDPQSGTCL 217
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
G+IIGK GET+ +L++E+G+++ +S S T ER+ + GS+D++ I I
Sbjct: 57 GAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIMVVADFIADKIR 116
Query: 507 EFHKNQNKHLGGNGESQLIQ-----LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
E + K L ES+L+Q ++++VP S G IIGK G+ IK I+ETSG+ V ++
Sbjct: 117 E-KPDLTKPLV-ETESKLMQDRDKQVKILVPNSTAGMIIGKAGNYIKQIKETSGSYVQIS 174
Query: 562 SDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
S ER + + G + QA I +V+ P G +
Sbjct: 175 QKAKDVSLQERCITVIGEKEQNRQACQMILAKIVEDPQSGTCL 217
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+K + + ++GA++G GG + EI+++SGA I+ISK + +R +T+TG+P +I
Sbjct: 447 SKNVEIAEVIVGAILGPGGRSLVEIQQLSGANIQISKKGIFAPGTRNRIVTITGSPQSIN 506
Query: 323 LAQYLINMSV---ELLRANLNGEG 343
AQYLI + EL RA NG G
Sbjct: 507 TAQYLIEQRISEEELKRARNNGLG 530
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+K + + ++GA++G GG + EI+++SGA I+ISK + +R +T+TG+P +I
Sbjct: 447 SKNVEIAEVIVGAILGPGGRSLVEIQQLSGANIQISKKGIFAPGTRNRIVTITGSPQSIN 506
Query: 768 LAQYLINMSV---ELLRANLNGEG 788
AQYLI + EL RA NG G
Sbjct: 507 TAQYLIEQRISEEELKRARNNGLG 530
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ VP+ GA+IGKGG I +++K +GA +++SKS + + +R +TG+ DAI +
Sbjct: 48 KVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIMVV 107
Query: 325 QYLI 328
I
Sbjct: 108 ADFI 111
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ VP+ GA+IGKGG I +++K +GA +++SKS + + +R +TG+ DAI +
Sbjct: 48 KVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAIMVV 107
Query: 770 QYLI 773
I
Sbjct: 108 ADFI 111
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVN 129
GG+G +++VP+ G+IIGKGG I +++ +GA V ++ D P +TER
Sbjct: 40 GGDGT---YHFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCL 96
Query: 130 IKGVPDAV 137
I G DA+
Sbjct: 97 ITGSVDAI 104
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVN 574
GG+G +++VP+ G+IIGKGG I +++ +GA V ++ D P +TER
Sbjct: 40 GGDGT---YHFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCL 96
Query: 575 IKGVPDAV 582
I G DA+
Sbjct: 97 ITGSVDAI 104
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS----DSSTPERIVTVIGSMDSLF 495
++++ ++ G IIGK+G +K+++E SGS + IS D S ER +TVIG +
Sbjct: 138 KQVKILVPNSTAGMIIGKAGNYIKQIKETSGSYVQISQKAKDVSLQERCITVIGEKEQNR 197
Query: 496 RAFSLITKNIEE 507
+A +I I E
Sbjct: 198 QACQMILAKIVE 209
>gi|348668189|gb|EGZ08013.1| hypothetical protein PHYSODRAFT_339892 [Phytophthora sojae]
Length = 644
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 27/217 (12%)
Query: 400 GGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSG 459
G L+D GG G +SGG G GP ++ Q++ + R + VG IIG+ G
Sbjct: 158 GTLNDNYGGPRDG--DSHSGG-GNAHYGPGSSDGQSSYDMKVPREL-----VGYIIGRGG 209
Query: 460 ETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNK 514
ET++ L+ +SG+ I I TP+R V + G+ D+L A LI I+E +NQ
Sbjct: 210 ETIRDLQMKSGAHIQIVREEEGAPQTPDRFVNITGNQDALDLAQRLIQNLIDERQQNQGA 269
Query: 515 -------------HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
GG + L+VP + G IIG+GG IK I++ +G SV +
Sbjct: 270 GGFRERDDRDRMARYGGINPDGTDSVELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIP 329
Query: 562 SDMLPNSTE-REVNIKGVPDAVTQAIYQICLIMVDSP 597
PN + R + I+G +A A ++I ++ + P
Sbjct: 330 QTPDPNHPDMRLITIRGTMEAKEAAKFEIHSMINEEP 366
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 19/166 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 60
VG IIG+ GET++ L+ +SG+ I I TP+R V + G+ D+L A LI I
Sbjct: 201 VGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRFVNITGNQDALDLAQRLIQNLI 260
Query: 61 EEFHKNQNK-------------HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+E +NQ GG + L+VP + G IIG+GG IK I++
Sbjct: 261 DERQQNQGAGGFRERDDRDRMARYGGINPDGTDSVELLVPNERVGLIIGRGGCTIKAIQQ 320
Query: 108 TSGASVYVASDMLPNSTE-REVNIKGVPDAVTQAIYQICLIMVDSP 152
+G SV + PN + R + I+G +A A ++I ++ + P
Sbjct: 321 RTGTSVTIPQTPDPNHPDMRLITIRGTMEAKEAAKFEIHSMINEEP 366
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
Q + +M VP EL+G +IG+GG I +++ SGA I+I + E + DR + +TG DA
Sbjct: 189 QSSYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRFVNITGNQDA 248
Query: 321 IALAQYLINMSVELLRANLNGEGGGESNMD 350
+ LAQ LI ++ + N G GG D
Sbjct: 249 LDLAQRLIQNLIDERQQN-QGAGGFRERDD 277
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
Q + +M VP EL+G +IG+GG I +++ SGA I+I + E + DR + +TG DA
Sbjct: 189 QSSYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRFVNITGNQDA 248
Query: 766 IALAQYLINMSVELLRANLNGEGGGESNMD 795
+ LAQ LI ++ + N G GG D
Sbjct: 249 LDLAQRLIQNLIDERQQN-QGAGGFRERDD 277
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSSTPE----RIVTVIGSMDSLFRAFSLITKN 59
+ VG IIG+ G T+K +++ +G+ + I + P R++T+ G+M++ A I
Sbjct: 302 ERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPDMRLITIRGTMEAKEAAKFEIHSM 361
Query: 60 IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 119
I E + +H G Q I ++ VP + G IIGK G IK I++ + +
Sbjct: 362 INE--EPGQRHGYGMASGQTIYMQ--VPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVP 417
Query: 120 LP--NSTEREVNIKGVPDAVTQAIYQICLIMV 149
P N R ++I+G P +T A ++ ++++
Sbjct: 418 DPGSNPPVRTISIQGPPQNLTGAKEEVDMVIL 449
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VPNE +G +IG+GG I I++ +G + I ++ + + R IT+ GT +A A
Sbjct: 296 ELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNH-PDMRLITIRGTMEAKEAA 354
Query: 325 QYLIN 329
++ I+
Sbjct: 355 KFEIH 359
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VPNE +G +IG+GG I I++ +G + I ++ + + R IT+ GT +A A
Sbjct: 296 ELLVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNH-PDMRLITIRGTMEAKEAA 354
Query: 770 QYLIN 774
++ I+
Sbjct: 355 KFEIH 359
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 160/379 (42%), Gaps = 63/379 (16%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSM----------------- 46
VG +IGKSG+ + +R + +KI + D +R++T+ S+
Sbjct: 47 VGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPL 106
Query: 47 ----DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 102
D+L + + I + EE + N N E RL+VP SQ S+IGK G I
Sbjct: 107 CCAQDALLKVYDAIVASDEENNTKTNVDRDDNKE-----CRLLVPFSQSSSLIGKAGENI 161
Query: 103 KTIRETSGASVYVASDMLPNST-------EREVNIKGVPDAVTQAIYQICLIMVDSPPKG 155
K IR + ASV V S + + + + V I G P++V QA++ + IM P+
Sbjct: 162 KRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPR- 220
Query: 156 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 215
IP Q+ +I + NS+ +N L G G+ N
Sbjct: 221 ENIPLDSTSQDVPAASVIVPS-DLSNSVYPQTGFYSNQDHIL-------QQGAGVPSYFN 272
Query: 216 AAALAALA-SSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 274
A +++ ++ N +P + H G S ++ ++ ++ P I
Sbjct: 273 ALSVSDFQGYAETAANPVPVFASSLPVTHGF----GGSSRS----EELVFKVLCPLCNIM 324
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDSNDRTITMTGTPDAIALAQYLINMSVE 333
VIGKGG+ I IR+ SG+ I ++ S + +D +T T +PD + +M+VE
Sbjct: 325 RVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMK------SMAVE 378
Query: 334 ---LLRANLNGEGGGESNM 349
LL+ +N E M
Sbjct: 379 AVLLLQEYINDEDAENVKM 397
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 160/379 (42%), Gaps = 63/379 (16%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSM----------------- 491
VG +IGKSG+ + +R + +KI + D +R++T+ S+
Sbjct: 47 VGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPL 106
Query: 492 ----DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
D+L + + I + EE + N N E RL+VP SQ S+IGK G I
Sbjct: 107 CCAQDALLKVYDAIVASDEENNTKTNVDRDDNKE-----CRLLVPFSQSSSLIGKAGENI 161
Query: 548 KTIRETSGASVYVASDMLPNST-------EREVNIKGVPDAVTQAIYQICLIMVDSPPKG 600
K IR + ASV V S + + + + V I G P++V QA++ + IM P+
Sbjct: 162 KRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPR- 220
Query: 601 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 660
IP Q+ +I + NS+ +N L G G+ N
Sbjct: 221 ENIPLDSTSQDVPAASVIVPS-DLSNSVYPQTGFYSNQDHIL-------QQGAGVPSYFN 272
Query: 661 AAALAALA-SSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 719
A +++ ++ N +P + H G S ++ ++ ++ P I
Sbjct: 273 ALSVSDFQGYAETAANPVPVFASSLPVTHGF----GGSSRS----EELVFKVLCPLCNIM 324
Query: 720 AVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDSNDRTITMTGTPDAIALAQYLINMSVE 778
VIGKGG+ I IR+ SG+ I ++ S + +D +T T +PD + +M+VE
Sbjct: 325 RVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMK------SMAVE 378
Query: 779 ---LLRANLNGEGGGESNM 794
LL+ +N E M
Sbjct: 379 AVLLLQEYINDEDAENVKM 397
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 152/355 (42%), Gaps = 44/355 (12%)
Query: 254 KTNQQQNQITKE--MTVPNELIGAVIGKGGTKIFEIRKISGAMIRI-----SKSSEEEED 306
KTN ++ KE + VP ++IGK G I IR+ + A +++ S S
Sbjct: 130 KTNVDRDD-NKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAM 188
Query: 307 SNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAG 366
D + ++G P+++ Q L +S + + N N+ S+ ++P+++ +
Sbjct: 189 EYDNVVVISGEPESVK--QALFAVSAIMYKIN------PRENIPLDSTSQDVPAASVIVP 240
Query: 367 LNASN---PLAAALPQLAQILTK----PGALNALTSLSALGGLSDLLGGGSSGGGSG--N 417
+ SN P IL + P NAL S+S G ++ S
Sbjct: 241 SDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNAL-SVSDFQGYAETAANPVPVFASSLPV 299
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
+ GFGG + + MR +IGK G T+K++RE SGS I ++D
Sbjct: 300 THGFGGSSRSEELVFKVLCPLCNIMR----------VIGKGGSTIKRIREASGSCIEVND 349
Query: 478 SSTP---ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPAS 534
S T + V ++ + +S S+ + + + N N ++++L+V +
Sbjct: 350 SRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEN-----VKMQLLVSSK 404
Query: 535 QCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
G +IGK GS I IR+ + A++ ++ + E + V DA+ Q + ++
Sbjct: 405 VIGCVIGKSGSVINEIRKRTNANICISKGKKDDLVEVSGEVSSVRDALIQIVLRL 459
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
+IGK G T+K++RE SGS I ++DS T + V ++ + +S S+ + + +
Sbjct: 326 VIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQE 385
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
N N ++++L+V + G +IGK GS I IR+ + A++ ++ + E
Sbjct: 386 YINDEDAEN-----VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKKDDLVE 440
Query: 126 REVNIKGVPDAVTQAIYQI 144
+ V DA+ Q + ++
Sbjct: 441 VSGEVSSVRDALIQIVLRL 459
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 151/346 (43%), Gaps = 34/346 (9%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG +IGK G VK L+ E+G+ I + + ER++T+ S + R I
Sbjct: 309 RVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILV 368
Query: 63 FHKNQN----KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV-YVAS 117
F+++ K L + + RL+VP++Q G ++GKGG+ I +R+ SGA + + S
Sbjct: 369 FNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGS 428
Query: 118 DMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDS--PPK---GATIPYRPLPQNAGG 169
D +P ++ V I G V +Y I + D+ P K GA I
Sbjct: 429 DQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISP 488
Query: 170 PGLIGN--QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
G + + FG+ +S+ +P + + L G+ L+ L SQ
Sbjct: 489 YGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHL------GLSHSLDHPTSPRLWPSQT 542
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
T PRN G K+ N T E+ +P +IG+V G+ G + +
Sbjct: 543 VTGVNPRNIKGGIEL-------GSGSKSAIITNT-TVEIVIPENVIGSVYGENGNNLARL 594
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
RKISGA + + E ++DR + ++GTPD AQ L+ +
Sbjct: 595 RKISGAKVTL---HEPRPGTSDRIVIISGTPDETQAAQSLLQAFIH 637
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 151/346 (43%), Gaps = 34/346 (9%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG +IGK G VK L+ E+G+ I + + ER++T+ S + R I
Sbjct: 309 RVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILV 368
Query: 508 FHKNQN----KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV-YVAS 562
F+++ K L + + RL+VP++Q G ++GKGG+ I +R+ SGA + + S
Sbjct: 369 FNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGS 428
Query: 563 DMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDS--PPK---GATIPYRPLPQNAGG 614
D +P ++ V I G V +Y I + D+ P K GA I
Sbjct: 429 DQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISP 488
Query: 615 PGLIGN--QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G + + FG+ +S+ +P + + L G+ L+ L SQ
Sbjct: 489 YGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHL------GLSHSLDHPTSPRLWPSQT 542
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
T PRN G K+ N T E+ +P +IG+V G+ G + +
Sbjct: 543 VTGVNPRNIKGGIEL-------GSGSKSAIITNT-TVEIVIPENVIGSVYGENGNNLARL 594
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
RKISGA + + E ++DR + ++GTPD AQ L+ +
Sbjct: 595 RKISGAKVTL---HEPRPGTSDRIVIISGTPDETQAAQSLLQAFIH 637
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 151/353 (42%), Gaps = 86/353 (24%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG---------- 489
R + +G +IGKSG VK+L+ ++G++I + DS ++ R++ VI
Sbjct: 53 FRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIAL 112
Query: 490 -----------SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGS 538
+ +++ R F I +E GG ++ RL+ SQ GS
Sbjct: 113 QGSSEEVEASAAQEAVLRVFERI---LEVAAVVDGVPPGG-----VVSCRLLAETSQVGS 164
Query: 539 IIGKGGSQIKTIRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMV 594
+IGKGG ++ IR SG+ + V ++ LP ST+ V I+G AV +A+ + +
Sbjct: 165 VIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQ 224
Query: 595 DSP--PKGATIPYRPL---PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGG 649
D P K I RPL PQ + P + F + S++ P + +N ++
Sbjct: 225 DCPNVDKTKLIGGRPLEVVPQQS-LPDPRVDLFQQRGSVL--PPIPSNTIS--------- 272
Query: 650 NSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 709
+ G +N ++ L KT+QQ ++
Sbjct: 273 YASGSRPLSINTERISTL-----------------------------DPKTSQQ--EVIF 301
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
++ N+ +G VIGKGGT + ++ +GA I + E ++R IT+T +
Sbjct: 302 KILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAE---CDERLITITAS 351
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 86/349 (24%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG-------------- 44
+G +IGKSG VK+L+ ++G++I + DS ++ R++ VI
Sbjct: 57 CHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIALQGSS 116
Query: 45 -------SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 97
+ +++ R F I +E GG ++ RL+ SQ GS+IGK
Sbjct: 117 EEVEASAAQEAVLRVFERI---LEVAAVVDGVPPGG-----VVSCRLLAETSQVGSVIGK 168
Query: 98 GGSQIKTIRETSGASVYV-ASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSP- 152
GG ++ IR SG+ + V ++ LP ST+ V I+G AV +A+ + + D P
Sbjct: 169 GGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQDCPN 228
Query: 153 -PKGATIPYRPL---PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG 208
K I RPL PQ + P + F + S++ P + +N ++ + G
Sbjct: 229 VDKTKLIGGRPLEVVPQQS-LPDPRVDLFQQRGSVL--PPIPSNTIS---------YASG 276
Query: 209 GMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTV 268
+N ++ L KT+QQ ++ ++
Sbjct: 277 SRPLSINTERISTL-----------------------------DPKTSQQ--EVIFKILC 305
Query: 269 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
N+ +G VIGKGGT + ++ +GA I + E ++R IT+T +
Sbjct: 306 SNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAE---CDERLITITAS 351
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 117/257 (45%), Gaps = 31/257 (12%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE--EEEDSNDRTITMTGTPD 319
++ + VP+ +G ++GKGGT I E+RK SGA IRI S + + ND+ + ++G
Sbjct: 390 VSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFV 449
Query: 320 AIALAQYLINMSVELLRAN------LNGEG-GGESNMDDFSSDNNLPSSAPLAGLNASNP 372
+ Y I LR N LNG G S M++ S + A GL++S
Sbjct: 450 NVQDGLYHITGR---LRDNLFPSKTLNGAGIRSSSAMNEISPYGRVRDPASF-GLHSS-- 503
Query: 373 LAAALPQLAQILTKPGALNAL-TSLSALGGLSDLLGGGSSGGGSGNSGGFGGVP--QGPN 429
P ++ T +++ L S S S L + G GG+ G
Sbjct: 504 -VGVSPSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGIELGSGSK 562
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTV 487
A I T V+ ++ +GS+ G++G + +LR+ SG+K+ + + T +RIV +
Sbjct: 563 SAIITNTTVE----IVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVII 618
Query: 488 IGSMD------SLFRAF 498
G+ D SL +AF
Sbjct: 619 SGTPDETQAAQSLLQAF 635
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 155/351 (44%), Gaps = 39/351 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG---------- 489
R ++ ++VG IIG+ GE VK++ EE+ S+I I + T ERIV V
Sbjct: 15 FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 74
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+M+ L R + + E + GG S RL+V A+Q GS+IG+ G+ IK+
Sbjct: 75 AMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSS----RLLVAATQAGSLIGRQGATIKS 130
Query: 550 IRETSGASVYV-ASDMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
I++TSGA+V V ++ LP +R V ++G P V +A+ + + + +P
Sbjct: 131 IQDTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFLVDRSVLPL 190
Query: 606 RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALA 665
L ++ NQ Q++ G+ + N GG A ++
Sbjct: 191 FEL-------NVMANQNNQQST--GSQWQQPSSTQQQQPPSYSSNDSTYYGG----ADIS 237
Query: 666 ALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---NQITKEMTVPNELIGAVI 722
+ +Q +++ + + + + R+ G S Q+T+ M +P A+I
Sbjct: 238 HHSQTQQQSHDLANQHHHGVSMYGRDPTLGGSIAPPPPAPVITQVTQHMQIPLSYADAII 297
Query: 723 GKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
G G I +R+ SGA I I E + T+ + G+ + AQ LI
Sbjct: 298 GSAGANISYMRRTSGATITI---QETRSVPGEMTVEIHGSASQVQTAQQLI 345
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 152/344 (44%), Gaps = 39/344 (11%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIG----------SMDSLFR 51
++VG IIG+ GE VK++ EE+ S+I I + T ERIV V +M+ L R
Sbjct: 22 QKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISPAMEGLLR 81
Query: 52 AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
+ + E + GG S RL+V A+Q GS+IG+ G+ IK+I++TSGA
Sbjct: 82 VHRRVIEGAEPESVDAEIAPGGAPVSS----RLLVAATQAGSLIGRQGATIKSIQDTSGA 137
Query: 112 SVYV-ASDMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNA 167
+V V ++ LP +R V ++G P V +A+ + + + +P L
Sbjct: 138 NVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFLVDRSVLPLFEL---- 193
Query: 168 GGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
++ NQ Q++ G+ + N GG A ++ + +Q
Sbjct: 194 ---NVMANQNNQQST--GSQWQQPSSTQQQQPPSYSSNDSTYYGG----ADISHHSQTQQ 244
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---NQITKEMTVPNELIGAVIGKGGTKI 284
+++ + + + + R+ G S Q+T+ M +P A+IG G I
Sbjct: 245 QSHDLANQHHHGVSMYGRDPTLGGSIAPPPPAPVITQVTQHMQIPLSYADAIIGSAGANI 304
Query: 285 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+R+ SGA I I E + T+ + G+ + AQ LI
Sbjct: 305 SYMRRTSGATITI---QETRSVPGEMTVEIHGSASQVQTAQQLI 345
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 155/385 (40%), Gaps = 103/385 (26%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ +VG+IIG+ GE +K++ EES ++I I D PER V +
Sbjct: 116 FRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQISP 175
Query: 490 SMDSLFRAFSLITKNIE-EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
+MD L R I + EF + Q G + RL+VPASQ GS+IGK G+ IK
Sbjct: 176 AMDGLLRIHKRIADGSDGEFGQTQR------GTGTMGPTRLLVPASQAGSLIGKQGATIK 229
Query: 549 TIRETSGASVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQIC------------LIMV 594
+I+++S A V + ++ P + +R V I+G P +V +A+ I L +
Sbjct: 230 SIQDSSKAVVRIVENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLVDHSVLPLF 289
Query: 595 DSPPKGATIPY-RPLP----------------------QNAGGPGLIGNQFGMQNSLMGA 631
+ K ++P +P+P AG P + + Q++
Sbjct: 290 EQQMKMHSMPREQPMPAPQQWGPPQPWGPPPNHPPGGPGYAGNPQFMPPR--PQDNYYPP 347
Query: 632 PD---MGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQH 688
PD M P G++A G SG G + +A+ Q H
Sbjct: 348 PDVPPMEKQPHYGISAYGREAPSGVSASGNQPPSHVAS------------------QVTH 389
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
N M +P AVIG G I IR+ SGA + I +S
Sbjct: 390 N---------------------MQIPLSYADAVIGAAGASISYIRRHSGAAVTIQESRGA 428
Query: 749 EEDSNDRTITMTGTPDAIALAQYLI 773
+ N + + G+ + AQ LI
Sbjct: 429 PGEMN---VEIIGSASQVQTAQQLI 450
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 152/378 (40%), Gaps = 103/378 (27%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLFR 51
+VG+IIG+ GE +K++ EES ++I I D PER V + +MD L R
Sbjct: 123 HKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQISPAMDGLLR 182
Query: 52 AFSLITKNIE-EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
I + EF + Q G + RL+VPASQ GS+IGK G+ IK+I+++S
Sbjct: 183 IHKRIADGSDGEFGQTQR------GTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDSSK 236
Query: 111 ASVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQIC------------LIMVDSPPKGA 156
A V + ++ P + +R V I+G P +V +A+ I L + + K
Sbjct: 237 AVVRIVENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLVDHSVLPLFEQQMKMH 296
Query: 157 TIPY-RPLP----------------------QNAGGPGLIGNQFGMQNSLMGAPD---MG 190
++P +P+P AG P + + Q++ PD M
Sbjct: 297 SMPREQPMPAPQQWGPPQPWGPPPNHPPGGPGYAGNPQFMPPR--PQDNYYPPPDVPPME 354
Query: 191 NNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG 250
P G++A G SG G + +A+ Q HN
Sbjct: 355 KQPHYGISAYGREAPSGVSASGNQPPSHVAS------------------QVTHN------ 390
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
M +P AVIG G I IR+ SGA + I +S + N
Sbjct: 391 ---------------MQIPLSYADAVIGAAGASISYIRRHSGAAVTIQESRGAPGEMN-- 433
Query: 311 TITMTGTPDAIALAQYLI 328
+ + G+ + AQ LI
Sbjct: 434 -VEIIGSASQVQTAQQLI 450
Score = 40.4 bits (93), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 414 GSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKI 473
G+ G FG +G TG R ++ + GS+IGK G T+K +++ S + +
Sbjct: 188 ADGSDGEFGQTQRG--------TGTMGPTRLLVPASQAGSLIGKQGATIKSIQDSSKAVV 239
Query: 474 YISDSSTP-----ERIVTVIGSMDSLFRAFSLITKNIEEF 508
I ++ P +R+V + G S+ +A LI ++ +F
Sbjct: 240 RIVENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKF 279
>gi|332023471|gb|EGI63714.1| Far upstream element-binding protein 1 [Acromyrmex echinatior]
Length = 731
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 143/350 (40%), Gaps = 90/350 (25%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLI 501
++ G +VG IIGK GET+K+L+E+SG+K+ + S E+ + + G + A L+
Sbjct: 199 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 258
Query: 502 -----TKNIEEFHK----------NQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGS 545
K I+ FH+ N + G N G + + ++VP + G +IGKGG
Sbjct: 259 YELIAEKEIQMFHRGGRGATDRTGNYSNDSGFNHGPANSDGVEVLVPRAAVGVVIGKGGD 318
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
IK I+ SGA V +R+ + G AV QA +I ++
Sbjct: 319 MIKKIQAESGAKVQFQQGREEGPGDRKCLLSGKHQAVEQARQRIQELI------------ 366
Query: 606 RPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALA 665
+S+M D NN +GG G G G
Sbjct: 367 --------------------DSVMRRDDGRNN---------MGGRGSGPRGNGFGG---- 393
Query: 666 ALASSQLKTNHMPRNQNQNQNQHNRNNRD--GPSQKTNQQQNQITKEMTVPNELIGAVIG 723
N+N N++ +R GP Q++I TVP+ G +IG
Sbjct: 394 ----------------NRNPNEYGTWDRRQGGP------MQDKIETTFTVPSSKCGIIIG 431
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
KGG I +I + +GA + + ++ E N++ + G P+ + A+ +
Sbjct: 432 KGGETIKQINQQTGAHCELDRRNQSNE--NEKIFIIRGNPEQVEHAKRIF 479
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 141/347 (40%), Gaps = 90/347 (25%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLI--- 56
G +VG IIGK GET+K+L+E+SG+K+ + S E+ + + G + A L+
Sbjct: 202 GPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLVYEL 261
Query: 57 --TKNIEEFHK----------NQNKHLGGN-GESQLIQLRLIVPASQCGSIIGKGGSQIK 103
K I+ FH+ N + G N G + + ++VP + G +IGKGG IK
Sbjct: 262 IAEKEIQMFHRGGRGATDRTGNYSNDSGFNHGPANSDGVEVLVPRAAVGVVIGKGGDMIK 321
Query: 104 TIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPL 163
I+ SGA V +R+ + G AV QA +I ++
Sbjct: 322 KIQAESGAKVQFQQGREEGPGDRKCLLSGKHQAVEQARQRIQELI--------------- 366
Query: 164 PQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALA 223
+S+M D NN +GG G G G
Sbjct: 367 -----------------DSVMRRDDGRNN---------MGGRGSGPRGNGFGG------- 393
Query: 224 SSQLKTNHMPRNQNQNQNQHNRNNRD--GPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 281
N+N N++ +R GP Q++I TVP+ G +IGKGG
Sbjct: 394 -------------NRNPNEYGTWDRRQGGP------MQDKIETTFTVPSSKCGIIIGKGG 434
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
I +I + +GA + + ++ E N++ + G P+ + A+ +
Sbjct: 435 ETIKQINQQTGAHCELDRRNQSNE--NEKIFIIRGNPEQVEHAKRIF 479
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 119/277 (42%), Gaps = 52/277 (18%)
Query: 349 MDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTK--PGALNALTSLSALGGLSD-- 404
M D+S+ AP + S AAAL + QI K PG L D
Sbjct: 1 MSDYSA------VAPPQNFSQSTAFAAALQRAKQIAAKINPGGAQNNQDSKLKRPLEDSS 54
Query: 405 --------------LLG--GGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQG 448
L+G GG +G G+S G G P +N + +R +
Sbjct: 55 EPEAKKMASLVADPLIGIRGGPAGNSIGDSSGQGARPPS---SNPLCSMCNEDIR--VPD 109
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIG+ GE + +L+ E+G KI ++ S PER+ T+ GS +++ RA L+ +
Sbjct: 110 KMVGLIIGRGGEQITRLQTETGCKIQMAPESGGLPERVCTLTGSREAVNRAKELVLSIV- 168
Query: 507 EFHKNQNKHLGGNGESQLIQ-----------LRLIVPASQCGSIIGKGGSQIKTIRETSG 555
NQ G G+ + + +++P + G IIGKGG IK ++E SG
Sbjct: 169 ----NQRSRSEGIGDMNMSGSGSGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSG 224
Query: 556 ASVYVASDMLPNSTEREVNIKGVPDAV---TQAIYQI 589
A + V + E+ + I G P V Q +Y++
Sbjct: 225 AKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLVYEL 261
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 21/157 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIG+ GE + +L+ E+G KI ++ S PER+ T+ GS +++ RA L+ +
Sbjct: 110 KMVGLIIGRGGEQITRLQTETGCKIQMAPESGGLPERVCTLTGSREAVNRAKELVLSIV- 168
Query: 62 EFHKNQNKHLGGNGESQLIQ-----------LRLIVPASQCGSIIGKGGSQIKTIRETSG 110
NQ G G+ + + +++P + G IIGKGG IK ++E SG
Sbjct: 169 ----NQRSRSEGIGDMNMSGSGSGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSG 224
Query: 111 ASVYVASDMLPNSTEREVNIKGVPDAV---TQAIYQI 144
A + V + E+ + I G P V Q +Y++
Sbjct: 225 AKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLVYEL 261
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP +G VIGKGG I +I+ SGA ++ + EE DR ++G A+ A
Sbjct: 301 EVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQG--REEGPGDRKCLLSGKHQAVEQA 358
Query: 325 QYLINMSVELL------RANLNGEGGG 345
+ I ++ + R N+ G G G
Sbjct: 359 RQRIQELIDSVMRRDDGRNNMGGRGSG 385
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP +G VIGKGG I +I+ SGA ++ + EE DR ++G A+ A
Sbjct: 301 EVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQG--REEGPGDRKCLLSGKHQAVEQA 358
Query: 770 QYLINMSVELL------RANLNGEGGG 790
+ I ++ + R N+ G G G
Sbjct: 359 RQRIQELIDSVMRRDDGRNNMGGRGSG 385
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 56/292 (19%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSNDRTITMTGTPDAIAL 323
E+ +P +G +IGKGG I ++++ SGA M+ I + +E+ ++ + +TG P +
Sbjct: 197 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQ---EKPLRITGDPQKVEY 253
Query: 324 AQYLI-----NMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAA--- 375
A+ L+ +++ G N + S N+ P+++ G+ P AA
Sbjct: 254 AKQLVYELIAEKEIQMFHRGGRGATDRTGNYSNDSGFNHGPANS--DGVEVLVPRAAVGV 311
Query: 376 -----------------ALPQLAQILTK-PGALNALTS------LSALGGLSDLLGG-GS 410
A Q Q + PG L S A + +L+
Sbjct: 312 VIGKGGDMIKKIQAESGAKVQFQQGREEGPGDRKCLLSGKHQAVEQARQRIQELIDSVMR 371
Query: 411 SGGGSGNSGGFGGVPQGPNYA---NIQTTGVQ-RRMRHIMQGK----------EVGSIIG 456
G N GG G P+G + N G RR MQ K + G IIG
Sbjct: 372 RDDGRNNMGGRGSGPRGNGFGGNRNPNEYGTWDRRQGGPMQDKIETTFTVPSSKCGIIIG 431
Query: 457 KSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNI 505
K GET+K++ +++G+ + + S+ E+I + G+ + + A + ++ +
Sbjct: 432 KGGETIKQINQQTGAHCELDRRNQSNENEKIFIIRGNPEQVEHAKRIFSEKL 483
>gi|391325297|ref|XP_003737175.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Metaseiulus occidentalis]
Length = 323
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-TPERIVTVIGSMD 492
+T GV +R ++ + G+IIGKSG+ + +LR K+ + D PER++ V + D
Sbjct: 30 KTDGVWD-LRFLIPSQRAGAIIGKSGKQIVELRSTFNCKLVVPDCEGVPERLMLVRVNKD 88
Query: 493 SLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
L + LI+ +++ N++ NG+++ +++L++ + ++IGKGG++IK IRE
Sbjct: 89 LLPQ---LISSVVQKITANED---ATNGKNR-AEMKLLLHQKEAVALIGKGGARIKDIRE 141
Query: 553 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC 590
+ A++ + P S+++ V I G D VT+AI +C
Sbjct: 142 KTQAAIKIFDKTCPLSSDKVVRITGSADVVTEAIRTVC 179
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 83/140 (59%), Gaps = 8/140 (5%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-TPERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
G+IIGKSG+ + +LR K+ + D PER++ V + D L + LI+ +++
Sbjct: 47 GAIIGKSGKQIVELRSTFNCKLVVPDCEGVPERLMLVRVNKDLLPQ---LISSVVQKITA 103
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
N++ NG+++ +++L++ + ++IGKGG++IK IRE + A++ + P S++
Sbjct: 104 NED---ATNGKNR-AEMKLLLHQKEAVALIGKGGARIKDIREKTQAAIKIFDKTCPLSSD 159
Query: 126 REVNIKGVPDAVTQAIYQIC 145
+ V I G D VT+AI +C
Sbjct: 160 KVVRITGSADVVTEAIRTVC 179
>gi|348570404|ref|XP_003470987.1| PREDICTED: far upstream element-binding protein 3-like [Cavia
porcellus]
Length = 605
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 120
H G S + ++ ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHSDAEGNSTVQEI--LIPASKVGLVIGKGGETIKQLQERAGVKMVMIQDGPL 204
Query: 121 PNSTEREVNIKGVPDAVTQA 140
P T++ + I G P V QA
Sbjct: 205 PTGTDKPLRITGDPFKVQQA 224
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 565
H G S + ++ ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHSDAEGNSTVQEI--LIPASKVGLVIGKGGETIKQLQERAGVKMVMIQDGPL 204
Query: 566 PNSTEREVNIKGVPDAVTQA 585
P T++ + I G P V QA
Sbjct: 205 PTGTDKPLRITGDPFKVQQA 224
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPERAAQVMGPPDRCQHAAHIINELILTA 324
Query: 64 HKNQ----------------NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ + ++G G Q ++ VPA +CG +IGKGG IK+I +
Sbjct: 325 QERDGFGSLAVARGRGRGRGDWNVGAPGGVQ--EITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 144
SGA V + + P++ R I+GVP + A + I
Sbjct: 383 QSGAHVELQRNPPPSTDPGLRLFTIRGVPQQIEVARHLI 421
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPERAAQVMGPPDRCQHAAHIINELILTA 324
Query: 509 HKNQ----------------NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+ + ++G G Q ++ VPA +CG +IGKGG IK+I +
Sbjct: 325 QERDGFGSLAVARGRGRGRGDWNVGAPGGVQ--EITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 589
SGA V + + P++ R I+GVP + A + I
Sbjct: 383 QSGAHVELQRNPPPSTDPGLRLFTIRGVPQQIEVARHLI 421
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSL 500
++ +VG +IGK GET+K+L+E +G K + I D P ++ + + G + +A +
Sbjct: 168 LIPASKVGLVIGKGGETIKQLQERAGVKMVMIQDGPLPTGTDKPLRITGDPFKVQQAREM 227
Query: 501 ITKNIEEFHKNQNKHLGGNGESQLI--QLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+ + + E + + + G+ S+L + + VP G +IG+ G IK I+ +G +
Sbjct: 228 VLEIVREKEQADFRGVRGDFSSRLAGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI 287
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
D S ER + G PD A + I
Sbjct: 288 QFKPDDG-VSPERAAQVMGPPDRCQHAAHII 317
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 317 TPDAIALAQYLINMSVELLRANLNGEG 343
TP++I A+ L+ V+ R NG G
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGPG 153
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 762 TPDAIALAQYLINMSVELLRANLNGEG 788
TP++I A+ L+ V+ R NG G
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGPG 153
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP + G VIGKGG I I + SGA + + ++ D R T+ G P I +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPGLRLFTIRGVPQQIEVAR 418
Query: 326 YLINMSV 332
+LI+ V
Sbjct: 419 HLIDEKV 425
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP + G VIGKGG I I + SGA + + ++ D R T+ G P I +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPGLRLFTIRGVPQQIEVAR 418
Query: 771 YLINMSV 777
+LI+ V
Sbjct: 419 HLIDEKV 425
>gi|294657857|ref|XP_460153.2| DEHA2E19492p [Debaryomyces hansenii CBS767]
gi|199432999|emb|CAG88426.2| DEHA2E19492p [Debaryomyces hansenii CBS767]
Length = 347
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 20/218 (9%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
R ++ KE G +IG++G + +REE+ +K IS + ERI+TV G++D +A S
Sbjct: 67 YRVLVSAKESGCLIGQNGAVIDSIREETNTKAGISKLQPGSHERILTVSGTLDDCAKALS 126
Query: 500 -----LITKNIE---EFHKNQNKHLGGN----GESQLIQLRLIVPASQCGSIIGKGGSQI 547
L NIE + K L N GE+ + LRL++P +Q G++IG G++I
Sbjct: 127 YFAQALCNANIENLVSYSYFPLKQLSSNPCVEGETTI--LRLLIPNAQMGTLIGSKGARI 184
Query: 548 KTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPY 605
+ I+ S+ + LP S ER V ++G D + ++ I CLI S G + Y
Sbjct: 185 QQIQANYNISMIASKSFLPGSNERLVELQGTVDNLYDSLRIISRCLIEDFSSIVGTSY-Y 243
Query: 606 RPLPQN-AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGL 642
P N A +F QN++ + N+ + L
Sbjct: 244 VPKASNYARNNNQTNKRFNNQNAVTTSISFANDMVGAL 281
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS---- 54
+ KE G +IG++G + +REE+ +K IS + ERI+TV G++D +A S
Sbjct: 71 VSAKESGCLIGQNGAVIDSIREETNTKAGISKLQPGSHERILTVSGTLDDCAKALSYFAQ 130
Query: 55 -LITKNIE---EFHKNQNKHLGGN----GESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 106
L NIE + K L N GE+ + LRL++P +Q G++IG G++I+ I+
Sbjct: 131 ALCNANIENLVSYSYFPLKQLSSNPCVEGETTI--LRLLIPNAQMGTLIGSKGARIQQIQ 188
Query: 107 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLP 164
S+ + LP S ER V ++G D + ++ I CLI S G + Y P
Sbjct: 189 ANYNISMIASKSFLPGSNERLVELQGTVDNLYDSLRIISRCLIEDFSSIVGTSY-YVPKA 247
Query: 165 QN-AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGL 197
N A +F QN++ + N+ + L
Sbjct: 248 SNYARNNNQTNKRFNNQNAVTTSISFANDMVGAL 281
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S LI R++V A + G +IG+ G+ I +IRE + + S + P S ER + + G D
Sbjct: 62 SALINYRVLVSAKESGCLIGQNGAVIDSIREETNTKAGI-SKLQPGSHERILTVSGTLDD 120
Query: 137 VTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGN----QFGMQNSLMGA----- 186
+A+ + ++ + + Y PL Q + P + G + + N+ MG
Sbjct: 121 CAKALSYFAQALCNANIENLVSYSYFPLKQLSSNPCVEGETTILRLLIPNAQMGTLIGSK 180
Query: 187 -----PDMGNNPLAGLAALGL--GGN--------SGGGMGGGLN--AAALAALASSQLKT 229
N ++ +A+ G N + + L + L SS + T
Sbjct: 181 GARIQQIQANYNISMIASKSFLPGSNERLVELQGTVDNLYDSLRIISRCLIEDFSSIVGT 240
Query: 230 NH-MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
++ +P+ N +N + N R QN +T ++ N+++GA+IGK G++I +R
Sbjct: 241 SYYVPKASNYARNNNQTNKRFN-------NQNAVTTSISFANDMVGALIGKNGSRIQGVR 293
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
K+SGA I I S+E E +R T++GT A+ A+ L+ ++E
Sbjct: 294 KVSGATIGI---SDEVEGKPERVFTISGTAHAVEKAKSLLYHNLE 335
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S LI R++V A + G +IG+ G+ I +IRE + + S + P S ER + + G D
Sbjct: 62 SALINYRVLVSAKESGCLIGQNGAVIDSIREETNTKAGI-SKLQPGSHERILTVSGTLDD 120
Query: 582 VTQAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGN----QFGMQNSLMGA----- 631
+A+ + ++ + + Y PL Q + P + G + + N+ MG
Sbjct: 121 CAKALSYFAQALCNANIENLVSYSYFPLKQLSSNPCVEGETTILRLLIPNAQMGTLIGSK 180
Query: 632 -----PDMGNNPLAGLAALGL--GGN--------SGGGMGGGLN--AAALAALASSQLKT 674
N ++ +A+ G N + + L + L SS + T
Sbjct: 181 GARIQQIQANYNISMIASKSFLPGSNERLVELQGTVDNLYDSLRIISRCLIEDFSSIVGT 240
Query: 675 NH-MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
++ +P+ N +N + N R QN +T ++ N+++GA+IGK G++I +R
Sbjct: 241 SYYVPKASNYARNNNQTNKRFN-------NQNAVTTSISFANDMVGALIGKNGSRIQGVR 293
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
K+SGA I I S+E E +R T++GT A+ A+ L+ ++E
Sbjct: 294 KVSGATIGI---SDEVEGKPERVFTISGTAHAVEKAKSLLYHNLE 335
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 21/164 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ ++G++IG G +++++ + S S P ER+V + G++D+L+ +
Sbjct: 164 LRLLIPNAQMGTLIGSKGARIQQIQANYNISMIASKSFLPGSNERLVELQGTVDNLYDSL 223
Query: 499 SLITKN-IEEFH----------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+I++ IE+F +N N+ + + G++IG
Sbjct: 224 RIISRCLIEDFSSIVGTSYYVPKASNYARNNNQTNKRFNNQNAVTTSISFANDMVGALIG 283
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
K GS+I+ +R+ SGA++ + SD + ER I G AV +A
Sbjct: 284 KNGSRIQGVRKVSGATIGI-SDEVEGKPERVFTISGTAHAVEKA 326
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKN-I 60
++G++IG G +++++ + S S P ER+V + G++D+L+ + +I++ I
Sbjct: 172 QMGTLIGSKGARIQQIQANYNISMIASKSFLPGSNERLVELQGTVDNLYDSLRIISRCLI 231
Query: 61 EEFH----------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
E+F +N N+ + + G++IGK GS+I+
Sbjct: 232 EDFSSIVGTSYYVPKASNYARNNNQTNKRFNNQNAVTTSISFANDMVGALIGKNGSRIQG 291
Query: 105 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
+R+ SGA++ + SD + ER I G AV +A
Sbjct: 292 VRKVSGATIGI-SDEVEGKPERVFTISGTAHAVEKA 326
Score = 42.7 bits (99), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 424 VPQGPNYA--NIQTTGVQRRMRHI-----MQGKEVGSIIGKSGETVKKLREESGSKIYIS 476
VP+ NYA N QT + VG++IGK+G ++ +R+ SG+ I IS
Sbjct: 244 VPKASNYARNNNQTNKRFNNQNAVTTSISFANDMVGALIGKNGSRIQGVRKVSGATIGIS 303
Query: 477 DSS--TPERIVTVIGSMDSLFRAFSLITKNIE 506
D PER+ T+ G+ ++ +A SL+ N+E
Sbjct: 304 DEVEGKPERVFTISGTAHAVEKAKSLLYHNLE 335
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
VG++IGK+G ++ +R+ SG+ I ISD PER+ T+ G+ ++ +A SL+ N+E
Sbjct: 278 VGALIGKNGSRIQGVRKVSGATIGISDEVEGKPERVFTISGTAHAVEKAKSLLYHNLE 335
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 21/163 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VG+IIG+ GE +KK+ EES ++I I D PER V +
Sbjct: 110 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISP 169
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD LFR + IT + +++ G + RL+VPASQ GS+IGK G+ IK+
Sbjct: 170 AMDGLFRVYKRITDGSDGDSGQPERNISNVGPT-----RLLVPASQAGSLIGKQGATIKS 224
Query: 550 IRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQI 589
I+++S + V + + LP + +R V I+G P V +A+ I
Sbjct: 225 IQDSSKSIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESI 266
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 21/157 (13%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLF 50
++VG+IIG+ GE +KK+ EES ++I I D PER V + +MD LF
Sbjct: 116 AQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGLF 175
Query: 51 RAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
R + IT + +++ G + RL+VPASQ GS+IGK G+ IK+I+++S
Sbjct: 176 RVYKRITDGSDGDSGQPERNISNVGPT-----RLLVPASQAGSLIGKQGATIKSIQDSSK 230
Query: 111 ASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQI 144
+ V + + LP + +R V I+G P V +A+ I
Sbjct: 231 SIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESI 266
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 161/391 (41%), Gaps = 91/391 (23%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSM----------------- 46
+GS+IGKSG+ + +R+E+ ++I + D ER++T+ S+
Sbjct: 54 MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVTEKKDIIDIEHSELNYS 113
Query: 47 -------DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGG 99
D+L + I ++ +N + + RL+VP+SQC ++IGK G
Sbjct: 114 IPLCSAQDALLKVHDAIVASLATAAENTKI-----DRDDIRECRLLVPSSQCSNVIGKSG 168
Query: 100 SQIKTIRETSGASVYVASDML--PNST-----EREVNIKGVPDAVTQAIYQICLIMVDSP 152
S IK IR + A+V V S + P+ T + V I G ++V +A++ + IM
Sbjct: 169 SIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGESESVKKALFAVSAIMYKVS 228
Query: 153 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLA-----ALGLGGNSG 207
P+ IP Q S++ D+ P GL G N
Sbjct: 229 PR-EQIPLDTTVQEVPA------------SIIIPSDLSIYPQGGLYPNQDPIFQHGANVS 275
Query: 208 GGMG------GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ 261
+G G A + ++S L H G S K+ +
Sbjct: 276 SFIGTLPQGYGESAANPMPVFSASALPVVH----------------GFGGSSKS----EK 315
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+ ++ + IG VIGKGG+ I IR+ SG+ I ++ S +D T+T T +PD
Sbjct: 316 LVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDD- 374
Query: 322 ALAQYLINMSVE---LLRANLNGEGGGESNM 349
L +M+VE LL+ +N E + M
Sbjct: 375 -----LKSMAVEAVLLLQEKINDEDEEKVKM 400
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 161/391 (41%), Gaps = 91/391 (23%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSM----------------- 491
+GS+IGKSG+ + +R+E+ ++I + D ER++T+ S+
Sbjct: 54 MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVTEKKDIIDIEHSELNYS 113
Query: 492 -------DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGG 544
D+L + I ++ +N + + RL+VP+SQC ++IGK G
Sbjct: 114 IPLCSAQDALLKVHDAIVASLATAAENTKI-----DRDDIRECRLLVPSSQCSNVIGKSG 168
Query: 545 SQIKTIRETSGASVYVASDML--PNST-----EREVNIKGVPDAVTQAIYQICLIMVDSP 597
S IK IR + A+V V S + P+ T + V I G ++V +A++ + IM
Sbjct: 169 SIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGESESVKKALFAVSAIMYKVS 228
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLA-----ALGLGGNSG 652
P+ IP Q S++ D+ P GL G N
Sbjct: 229 PR-EQIPLDTTVQEVPA------------SIIIPSDLSIYPQGGLYPNQDPIFQHGANVS 275
Query: 653 GGMG------GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQ 706
+G G A + ++S L H G S K+ +
Sbjct: 276 SFIGTLPQGYGESAANPMPVFSASALPVVH----------------GFGGSSKS----EK 315
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+ ++ + IG VIGKGG+ I IR+ SG+ I ++ S +D T+T T +PD
Sbjct: 316 LVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDD- 374
Query: 767 ALAQYLINMSVE---LLRANLNGEGGGESNM 794
L +M+VE LL+ +N E + M
Sbjct: 375 -----LKSMAVEAVLLLQEKINDEDEEKVKM 400
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 150/350 (42%), Gaps = 49/350 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFS 499
++ I ++G +IGK G T+K +R+ SGS I ++DS + V + + +S S
Sbjct: 318 IKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDDLKS 377
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+ + + + N + + + ++++L+VP+ G IIGK GS I IR+ + A+++
Sbjct: 378 MAVEAVLLLQEKIN-----DEDEEKVKMQLLVPSKVIGCIIGKSGSIISEIRKRTKANIH 432
Query: 560 VAS----DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI------PYRPLP 609
++ + + V I G V A+ QI L + D + I P R
Sbjct: 433 ISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDREIGSRNQPPARSEN 492
Query: 610 QNAGGPGLIGNQFGMQNSLM------GAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
N G + +S M + D P G +++ + +SGG G G
Sbjct: 493 NNFFSSGSSNTGLALPSSFMSSVPQVASVDFDRRPETG-SSMSMLPSSGGLYGYG----- 546
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 723
S + N + + N + G Q T T E+ +P +G V+G
Sbjct: 547 -----SFPVGNNSYGSKSSYSSNLYG-----GLPQST-------TMEVRIPANAVGKVMG 589
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+GG + IR+ISGAMI IS S R ++GTP+ A+ L
Sbjct: 590 RGGGNLDNIRRISGAMIEISDSKNSH---GGRIALISGTPEQKRTAENLF 636
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 147/342 (42%), Gaps = 49/342 (14%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIEE 62
++G +IGK G T+K +R+ SGS I ++DS + V + + +S S+ + +
Sbjct: 326 KIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDDLKSMAVEAVLL 385
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS----D 118
+ N + + + ++++L+VP+ G IIGK GS I IR+ + A+++++
Sbjct: 386 LQEKIN-----DEDEEKVKMQLLVPSKVIGCIIGKSGSIISEIRKRTKANIHISKGNNKP 440
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI------PYRPLPQNAGGPGL 172
+ + V I G V A+ QI L + D + I P R N G
Sbjct: 441 KCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDREIGSRNQPPARSENNNFFSSGS 500
Query: 173 IGNQFGMQNSLM------GAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQ 226
+ +S M + D P G +++ + +SGG G G S
Sbjct: 501 SNTGLALPSSFMSSVPQVASVDFDRRPETG-SSMSMLPSSGGLYGYG----------SFP 549
Query: 227 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFE 286
+ N + + N + G Q T T E+ +P +G V+G+GG +
Sbjct: 550 VGNNSYGSKSSYSSNLYG-----GLPQST-------TMEVRIPANAVGKVMGRGGGNLDN 597
Query: 287 IRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
IR+ISGAMI IS S R ++GTP+ A+ L
Sbjct: 598 IRRISGAMIEISDSKNSH---GGRIALISGTPEQKRTAENLF 636
>gi|326927785|ref|XP_003210069.1| PREDICTED: poly(rC)-binding protein 4-like [Meleagris gallopavo]
Length = 268
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 96/173 (55%), Gaps = 16/173 (9%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
P +N Q + ++E VPN+LIG +IG+ G+KI EIR++SGA I+I + E S++R
Sbjct: 70 PGLDSNSQSS--SQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGN---QTEGSSER 124
Query: 311 TITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA-GLNA 369
IT+TG+P +I LAQYLI +E ++ + + S D + S PLA G +A
Sbjct: 125 HITITGSPVSITLAQYLITTCLETAKST------SQVPLGPGSVDLGVGFSQPLAPGSSA 178
Query: 370 SNPLAAALPQLAQILTKPGALNALTSLSALGGLSDL-LGGGSSGGGSGNSGGF 421
+ P A P +L P AL+ L++ L LS L L S+ G +G + +
Sbjct: 179 ALPAVPATP--PALLGTPYALS-LSNFIGLKPLSFLALSPSSAAGANGGTATY 228
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 14/145 (9%)
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
P +N Q + ++E VPN+LIG +IG+ G+KI EIR++SGA I+I + E S++R
Sbjct: 70 PGLDSNSQSS--SQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGN---QTEGSSER 124
Query: 756 TITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLA-GLNA 814
IT+TG+P +I LAQYLI +E ++ + + S D + S PLA G +A
Sbjct: 125 HITITGSPVSITLAQYLITTCLETAKST------SQVPLGPGSVDLGVGFSQPLAPGSSA 178
Query: 815 SNPLAAALPQLAQILTKPAGLNASN 839
+ P A P +L P L+ SN
Sbjct: 179 ALPAVPATP--PALLGTPYALSLSN 201
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
G + SQ +VP G IIG+ GS+I IR+ SGA + + + S+ER + I
Sbjct: 71 GLDSNSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIG-NQTEGSSERHITIT 129
Query: 132 GVPDAVTQAIYQI--CL 146
G P ++T A Y I CL
Sbjct: 130 GSPVSITLAQYLITTCL 146
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
G + SQ +VP G IIG+ GS+I IR+ SGA + + + S+ER + I
Sbjct: 71 GLDSNSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIG-NQTEGSSERHITIT 129
Query: 577 GVPDAVTQAIYQI--CL 591
G P ++T A Y I CL
Sbjct: 130 GSPVSITLAQYLITTCL 146
>gi|366996056|ref|XP_003677791.1| hypothetical protein NCAS_0H01320 [Naumovozyma castellii CBS 4309]
gi|342303661|emb|CCC71442.1| hypothetical protein NCAS_0H01320 [Naumovozyma castellii CBS 4309]
Length = 342
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 150/350 (42%), Gaps = 39/350 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFS 499
MR +M + IIG ET+++LR ES KI+ S RI+ V G +++ + F
Sbjct: 25 MRALMLDETTKLIIGDGSETIRQLRAESDVKIWFSKQVYGNEHRILFVKGLAENVAQTFG 84
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
I + I + N + + ++++ + P G IIGKGG +K I + S A V
Sbjct: 85 SIAR-ILAMATSPN---AVDINAVHVEIKFLFPNPVVGRIIGKGGLNVKEITKASAAIVK 140
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA----TIPYRPLPQNAGGP 615
+ L ST+R V+I GVP+++ A Y + + G IPY+P GP
Sbjct: 141 KSYHFLEGSTDRLVSIYGVPNSIHIATYYMAEAYFKTVAYGIDLSREIPYQP----REGP 196
Query: 616 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
++ + S +P + P + S ++
Sbjct: 197 VKEVSEIIIDRSDTKSPTLYAVPQPSIKKRRRSDFSDH---------------EDDVRPG 241
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
H+ R N PS+ N N ITK +T P++ VIG+ GT I +R+
Sbjct: 242 HLMRIPNLEIQSIE------PSKSGNLLSN-ITKVVTYPDKYSSKVIGREGTYINMLRES 294
Query: 736 SGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 785
+ IR+ KS +++ED I++ G P + A LI +EL + L+
Sbjct: 295 TSCSIRL-KSPDDKEDLA--IISIRGPPLCVDAALLLIAHRIELSKRLLD 341
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 145/338 (42%), Gaps = 39/338 (11%)
Query: 9 IIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIEEFHKN 66
IIG ET+++LR ES KI+ S RI+ V G +++ + F I + I +
Sbjct: 37 IIGDGSETIRQLRAESDVKIWFSKQVYGNEHRILFVKGLAENVAQTFGSIAR-ILAMATS 95
Query: 67 QNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTER 126
N + + ++++ + P G IIGKGG +K I + S A V + L ST+R
Sbjct: 96 PN---AVDINAVHVEIKFLFPNPVVGRIIGKGGLNVKEITKASAAIVKKSYHFLEGSTDR 152
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPPKGA----TIPYRPLPQNAGGPGLIGNQFGMQNS 182
V+I GVP+++ A Y + + G IPY+P GP ++ + S
Sbjct: 153 LVSIYGVPNSIHIATYYMAEAYFKTVAYGIDLSREIPYQP----REGPVKEVSEIIIDRS 208
Query: 183 LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQ 242
+P + P + S ++ H+ R N
Sbjct: 209 DTKSPTLYAVPQPSIKKRRRSDFSDH---------------EDDVRPGHLMRIPNLEIQS 253
Query: 243 HNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE 302
PS+ N N ITK +T P++ VIG+ GT I +R+ + IR+ KS +
Sbjct: 254 IE------PSKSGNLLSN-ITKVVTYPDKYSSKVIGREGTYINMLRESTSCSIRL-KSPD 305
Query: 303 EEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLN 340
++ED I++ G P + A LI +EL + L+
Sbjct: 306 DKEDLA--IISIRGPPLCVDAALLLIAHRIELSKRLLD 341
>gi|242002844|ref|XP_002436065.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
gi|215499401|gb|EEC08895.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
Length = 474
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 10/162 (6%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
G+IIGK GET+ L++E+G+++ +S S+ T ER+ + GS++ + R I + I+
Sbjct: 62 GAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLRIHEFIMEKIK 121
Query: 62 EFHKNQNKHLGGNGESQLI----QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E K Q Q++++VP S G IIGKGGS IK I+E SGA V ++
Sbjct: 122 EKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQ 181
Query: 118 DMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
++ ER + + G + +A + I +V+ P G+ +
Sbjct: 182 KSKDHALAERCITVIGELENNKKACHMILAKIVEDPQSGSCL 223
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 10/162 (6%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
G+IIGK GET+ L++E+G+++ +S S+ T ER+ + GS++ + R I + I+
Sbjct: 62 GAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLRIHEFIMEKIK 121
Query: 507 EFHKNQNKHLGGNGESQLI----QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 562
E K Q Q++++VP S G IIGKGGS IK I+E SGA V ++
Sbjct: 122 EKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQ 181
Query: 563 DMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
++ ER + + G + +A + I +V+ P G+ +
Sbjct: 182 KSKDHALAERCITVIGELENNKKACHMILAKIVEDPQSGSCL 223
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%)
Query: 260 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
+ + +++ V ++GA++G GG + EI++ SGA I+ISK + +R +T+TG+P+
Sbjct: 385 DAVKRDLEVGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGIFAPGTRNRIVTITGSPN 444
Query: 320 AIALAQYLINMSV 332
A++ AQYLI +
Sbjct: 445 AVSTAQYLIEQQI 457
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
+ + +++ V ++GA++G GG + EI++ SGA I+ISK + +R +T+TG+P+
Sbjct: 385 DAVKRDLEVGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGIFAPGTRNRIVTITGSPN 444
Query: 765 AIALAQYLINMSV 777
A++ AQYLI +
Sbjct: 445 AVSTAQYLIEQQI 457
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS----DSSTPERI 484
++ + Q +++++ ++ G IIGK G +K+++EESG+ + IS D + ER
Sbjct: 133 DFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERC 192
Query: 485 VTVIGSMDSLFRAFSLITKNIEE 507
+TVIG +++ +A +I I E
Sbjct: 193 ITVIGELENNKKACHMILAKIVE 215
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNS 123
++ H GGNG +++VPA G+IIGKGG I +++ +GA V ++ D P +
Sbjct: 39 KRSHHGGGNGT---YHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGT 95
Query: 124 TEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
TER I G + V + I++ + + P
Sbjct: 96 TERVCLITGSVEGVLR-IHEFIMEKIKEKP 124
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 511 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNS 568
++ H GGNG +++VPA G+IIGKGG I +++ +GA V ++ D P +
Sbjct: 39 KRSHHGGGNGT---YHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGT 95
Query: 569 TEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
TER I G + V + I++ + + P
Sbjct: 96 TERVCLITGSVEGVLR-IHEFIMEKIKEKP 124
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
D ++ +++ Q+ ++ VPN G +IGKGG+ I +I++ SGA ++IS+ S++ +
Sbjct: 133 DFDHKQPAEREKQV--KILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALA- 189
Query: 309 DRTITMTG 316
+R IT+ G
Sbjct: 190 ERCITVIG 197
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 694 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
D ++ +++ Q+ ++ VPN G +IGKGG+ I +I++ SGA ++IS+ S++ +
Sbjct: 133 DFDHKQPAEREKQV--KILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALA- 189
Query: 754 DRTITMTG 761
+R IT+ G
Sbjct: 190 ERCITVIG 197
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 84/148 (56%), Gaps = 5/148 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 120
+ H +G S + ++ ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPSFHNDVDGNSTIQEI--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIM 148
P T++ + I G P V QA + I+
Sbjct: 205 PTGTDKPLRITGDPFKVQQAREMVLEII 232
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 84/148 (56%), Gaps = 5/148 (3%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 565
+ H +G S + ++ ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPSFHNDVDGNSTIQEI--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 566 PNSTEREVNIKGVPDAVTQAIYQICLIM 593
P T++ + I G P V QA + I+
Sbjct: 205 PTGTDKPLRITGDPFKVQQAREMVLEII 232
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I++ I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELI--L 322
Query: 64 HKNQNKHLG------GNGESQ----------LIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ G G G S+ + ++ VPA +CG +IGKGG IK+I +
Sbjct: 323 TAQERDGFGSLAVPRGRGRSRGDWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 144
SGA V + + PN+ R I+G+P + A + I
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI 421
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I++ I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELI--L 322
Query: 509 HKNQNKHLG------GNGESQ----------LIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+ G G G S+ + ++ VPA +CG +IGKGG IK+I +
Sbjct: 323 TAQERDGFGSLAVPRGRGRSRGDWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 589
SGA V + + PN+ R I+G+P + A + I
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI 421
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 317 TPDAIALAQYLINMSVELLR 336
TP++I A+ L+ V+ R
Sbjct: 130 TPESIEQAKRLLGQIVDRCR 149
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 762 TPDAIALAQYLINMSVELLR 781
TP++I A+ L+ V+ R
Sbjct: 130 TPESIEQAKRLLGQIVDRCR 149
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSL 500
++ +VG +IGK GET+K+L+E +G K + I D P ++ + + G + +A +
Sbjct: 168 LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGTDKPLRITGDPFKVQQAREM 227
Query: 501 ITKNIEEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+ + I E + + + G+ S++ + + VP G +IG+ G IK I+ +G +
Sbjct: 228 VLEIIREKDQADFRSVRGDFGSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI 287
Query: 559 -YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV 594
+ D + S ER + G PD A + I +++
Sbjct: 288 QFKPDDGI--SPERAAQVMGPPDRCQHAAHIISELIL 322
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P I +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVAR 418
Query: 326 YLINMSV 332
+LI+ V
Sbjct: 419 HLIDEKV 425
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P I +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVAR 418
Query: 771 YLINMSV 777
+LI+ V
Sbjct: 419 HLIDEKV 425
>gi|240992417|ref|XP_002404460.1| transformation upregulated nuclear protein, putative [Ixodes
scapularis]
gi|215491567|gb|EEC01208.1| transformation upregulated nuclear protein, putative [Ixodes
scapularis]
Length = 316
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Query: 39 IVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 98
I++++ +D+L + I +++F +H G NG S+ ++RL++ S G +IG+
Sbjct: 31 ILSIVADLDTLGEILASIIPKLDDF----AQHTGQNGRSES-EMRLLMHQSHAGCVIGRA 85
Query: 99 GSQIKTIRETSGASVYVASD-------MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
G +IK +RE G+SV ++ P STER V + G P V I QIC I+ ++
Sbjct: 86 GCRIKELREV-GSSVLTGANNQGGTGSCCPGSTERIVKVTGSPSVVVDCIKQICDIIAEA 144
Query: 152 PPKGATIPYRP 162
P KG PY P
Sbjct: 145 PVKGLNKPYDP 155
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Query: 484 IVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKG 543
I++++ +D+L + I +++F +H G NG S+ ++RL++ S G +IG+
Sbjct: 31 ILSIVADLDTLGEILASIIPKLDDF----AQHTGQNGRSES-EMRLLMHQSHAGCVIGRA 85
Query: 544 GSQIKTIRETSGASVYVASD-------MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
G +IK +RE G+SV ++ P STER V + G P V I QIC I+ ++
Sbjct: 86 GCRIKELREV-GSSVLTGANNQGGTGSCCPGSTERIVKVTGSPSVVVDCIKQICDIIAEA 144
Query: 597 PPKGATIPYRP 607
P KG PY P
Sbjct: 145 PVKGLNKPYDP 155
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 155/370 (41%), Gaps = 70/370 (18%)
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
QN I M VP + +GA+IGK G I I K + + I I + +E ++++ IT+ +
Sbjct: 194 HQNDIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHR--KENAGASEKPITIHAS 251
Query: 318 PDAIALAQYLI---------------NMSVELLRAN-----LNGEGGGESNMDDFSSDNN 357
P+ + A +I + +++L N L G+ G N+ D +
Sbjct: 252 PEGCSTACKIIMEIMQKEAQDTKFTDEIPLKILAHNNFVGRLIGKEG--RNLKKIEQDTD 309
Query: 358 LPSS-APLAGLNASNPLAAALPQLAQILTKPGALNAL----------------TSLSALG 400
+ +PL L NP + +T G++ + LSA+
Sbjct: 310 TKITISPLQELTLYNP--------ERTITVKGSIETCGKAEEEIMKKIRESYESDLSAMN 361
Query: 401 GLSDLLGG-----------GSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGK 449
+ LL G +SG S ++ G NY + +
Sbjct: 362 LQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAATNYLPYGQQAETETVHLFIPAM 421
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 506
VG+IIGK G+ +K+L +G+ I I+ TP ER+V + G ++ F+A I ++
Sbjct: 422 AVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITGPPEAQFKAQGRIYGKLK 481
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E ++ G E ++ + VP+ G +IGKGG + ++ + A V V D +P
Sbjct: 482 E------ENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQIP 535
Query: 567 NSTEREVNIK 576
+ + EV +K
Sbjct: 536 DEND-EVIVK 544
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 52/185 (28%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSST-----PERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ +++ +KI IS PER +TV GS+++ +A I K I
Sbjct: 290 VGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSIETCGKAEEEIMKKI 349
Query: 61 EEFHK------NQNKHL---------------------------------------GGNG 75
E ++ N HL G
Sbjct: 350 RESYESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAATNYLPYGQQA 409
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E++ + L +PA G+IIGK G IK + +GAS+ +A P++ ER V I G P+
Sbjct: 410 ETETVHL--FIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITGPPE 467
Query: 136 AVTQA 140
A +A
Sbjct: 468 AQFKA 472
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 52/185 (28%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSST-----PERIVTVIGSMDSLFRAFSLITKNI 505
VG +IGK G +KK+ +++ +KI IS PER +TV GS+++ +A I K I
Sbjct: 290 VGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSIETCGKAEEEIMKKI 349
Query: 506 EEFHK------NQNKHL---------------------------------------GGNG 520
E ++ N HL G
Sbjct: 350 RESYESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAATNYLPYGQQA 409
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
E++ + L +PA G+IIGK G IK + +GAS+ +A P++ ER V I G P+
Sbjct: 410 ETETVHL--FIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITGPPE 467
Query: 581 AVTQA 585
A +A
Sbjct: 468 AQFKA 472
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L +G+ I I+ TP ER+V + G ++ F+A I ++E
Sbjct: 423 VGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITGPPEAQFKAQGRIYGKLKE 482
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ G E ++ + VP+ G +IGKGG + ++ + A V V D +P+
Sbjct: 483 ------ENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQIPD 536
Query: 123 STEREVNIK 131
+ EV +K
Sbjct: 537 END-EVIVK 544
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 69/336 (20%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T++ + +++ SKI I ++ E+ +T+ S + A
Sbjct: 200 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASPEGCSTAC 259
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I + ++ K + I L+++ + G +IGK G +K I + + +
Sbjct: 260 KIIMEIMQ-------KEAQDTKFTDEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKI 312
Query: 559 YVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
++ ++ + ER + +KG + +A +I + +S
Sbjct: 313 TISPLQELTLYNPERTITVKGSIETCGKAEEEIMKKIRES-------------------- 352
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
S + A ++ + L G L ALGL S G+ +A A+ T
Sbjct: 353 --------YESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAA----T 400
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
N++P QQ T + +P +GA+IGK G I ++ +
Sbjct: 401 NYLP---------------------YGQQAETETVHLFIPAMAVGAIIGKMGQHIKQLSR 439
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+GA I+I+ E D+ +R + +TG P+A AQ
Sbjct: 440 FAGASIKIAPP--ETPDAKERMVIITGPPEAQFKAQ 473
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 69/327 (21%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T++ + +++ SKI I ++ E+ +T+ S + A +I + ++
Sbjct: 209 VGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASPEGCSTACKIIMEIMQ- 267
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDML 120
K + I L+++ + G +IGK G +K I + + + ++ ++
Sbjct: 268 ------KEAQDTKFTDEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELT 321
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
+ ER + +KG + +A +I + +S
Sbjct: 322 LYNPERTITVKGSIETCGKAEEEIMKKIRES----------------------------Y 353
Query: 181 NSLMGAPDMGNNPLAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
S + A ++ + L G L ALGL S G+ +A A+ TN++P
Sbjct: 354 ESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAA----TNYLP----- 404
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
QQ T + +P +GA+IGK G I ++ + +GA I+I+
Sbjct: 405 ----------------YGQQAETETVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIA 448
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQ 325
E D+ +R + +TG P+A AQ
Sbjct: 449 PP--ETPDAKERMVIITGPPEAQFKAQ 473
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
QN I M VP + +GA+IGK G I I K + + I I + +E ++++ IT+ +
Sbjct: 194 HQNDIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHR--KENAGASEKPITIHAS 251
Query: 763 PDAIALAQYLI 773
P+ + A +I
Sbjct: 252 PEGCSTACKII 262
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 13/172 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
+R ++ GS+IGK G T+ + +SG++I +S + T +RI+ V GS++ + +
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILK 96
Query: 497 AFSLI-TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
A L+ K + E H + G+ ++RLIVP S CG+IIGKGGS IK+ E S
Sbjct: 97 AMELVLAKLLSELHAEE-----GDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQ 151
Query: 556 ASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 605
A + ++ + ST+R V + G + +A I + + P ++ Y
Sbjct: 152 AGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNY 203
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 13/162 (8%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLI-TKNI 60
GS+IGK G T+ + +SG++I +S + T +RI+ V GS++ + +A L+ K +
Sbjct: 47 GSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLL 106
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SD 118
E H + G+ ++RLIVP S CG+IIGKGGS IK+ E S A + ++ +
Sbjct: 107 SELHAEE-----GDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDN 161
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
ST+R V + G + +A I + + P ++ Y
Sbjct: 162 NYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNY 203
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 42/187 (22%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS-----STPERIVTVIGSMDSLF 495
++R I+ G+IIGK G T+K E+S + I IS ++ +R+VT+ G+++
Sbjct: 122 KVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQM 181
Query: 496 RAFSLITKNI-EEFHKNQNKHLG----------------------------GNGESQLIQ 526
RA LI + E+ H Q+ + S+++Q
Sbjct: 182 RATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKPDTRSSEIVQ 241
Query: 527 ------LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGV 578
L + V G ++G+GG I I + SGA + ++ D + +T+R+V I G
Sbjct: 242 EERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGS 301
Query: 579 PDAVTQA 585
A+ A
Sbjct: 302 QRAIRAA 308
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 246 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 305
N D S + Q++ + + V + IG V+G+GG I EI + SGA I+IS +
Sbjct: 230 NKPDTRSSEIVQEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMS 289
Query: 306 DSNDRTITMTGTPDAIALAQYLI 328
+ DR +T+TG+ AI A+ +I
Sbjct: 290 GTTDRKVTITGSQRAIRAAESMI 312
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 691 NNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE 750
N D S + Q++ + + V + IG V+G+GG I EI + SGA I+IS +
Sbjct: 230 NKPDTRSSEIVQEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMS 289
Query: 751 DSNDRTITMTGTPDAIALAQYLI 773
+ DR +T+TG+ AI A+ +I
Sbjct: 290 GTTDRKVTITGSQRAIRAAESMI 312
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 42/177 (23%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDS-----STPERIVTVIGSMDSLFRAFSLITKNI 60
G+IIGK G T+K E+S + I IS ++ +R+VT+ G+++ RA LI +
Sbjct: 132 CGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKL 191
Query: 61 -EEFHKNQNKHLG----------------------------GNGESQLIQ------LRLI 85
E+ H Q+ + S+++Q L +
Sbjct: 192 SEDPHYTQSMNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKPDTRSSEIVQEERNNSLTIG 251
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQA 140
V G ++G+GG I I + SGA + ++ D + +T+R+V I G A+ A
Sbjct: 252 VSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAA 308
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 60
VG++IGK GET++ L+ ESG ++ +S + T ERI V G + S+ + +I + I
Sbjct: 67 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKVSDVILEKI 126
Query: 61 EEFHKNQ--NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--- 115
E N + G + +++L+VP + G +IGK G++IK IRE +GA++ V
Sbjct: 127 REKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPK 186
Query: 116 -ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG--ATIP 159
S S ER + I D V Q L V + P+ ATIP
Sbjct: 187 AGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAADPQHAMATIP 233
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 505
VG++IGK GET++ L+ ESG ++ +S + T ERI V G + S+ + +I + I
Sbjct: 67 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKVSDVILEKI 126
Query: 506 EEFHKNQ--NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--- 560
E N + G + +++L+VP + G +IGK G++IK IRE +GA++ V
Sbjct: 127 REKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPK 186
Query: 561 -ASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG--ATIP 604
S S ER + I D V Q L V + P+ ATIP
Sbjct: 187 AGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAADPQHAMATIP 233
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRTITMTGTPDAIA 322
++ VPN G VIGK G +I EIR+ +GA I++ S+E + S +R IT+ D +
Sbjct: 151 KLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVL 210
Query: 323 L 323
+
Sbjct: 211 M 211
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRTITMTGTPDAIA 767
++ VPN G VIGK G +I EIR+ +GA I++ S+E + S +R IT+ D +
Sbjct: 151 KLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVL 210
Query: 768 L 768
+
Sbjct: 211 M 211
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 23/139 (16%)
Query: 245 RNNRDGPSQK----TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
R+ R GP+ K ++ + N + ++ +P+ +GA+IGKGG + ++ SG +++SK+
Sbjct: 35 RDERGGPATKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKN 94
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
E +N+R + G IA + ++ +E +R + DNN PS
Sbjct: 95 QEVYPGTNERICLVKGK---IASVLKVSDVILEKIREKV---------------DNNTPS 136
Query: 361 SA-PLAGLNASNPLAAALP 378
G+ N + +P
Sbjct: 137 DIFDHKGMERKNEMKLVVP 155
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 23/139 (16%)
Query: 690 RNNRDGPSQK----TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 745
R+ R GP+ K ++ + N + ++ +P+ +GA+IGKGG + ++ SG +++SK+
Sbjct: 35 RDERGGPATKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKN 94
Query: 746 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 805
E +N+R + G IA + ++ +E +R + DNN PS
Sbjct: 95 QEVYPGTNERICLVKGK---IASVLKVSDVILEKIREKV---------------DNNTPS 136
Query: 806 SA-PLAGLNASNPLAAALP 823
G+ N + +P
Sbjct: 137 DIFDHKGMERKNEMKLVVP 155
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKG- 132
E ++Q+++++P++ G++IGKGG ++ ++ SG + ++ ++ P + ER +KG
Sbjct: 52 EDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGK 111
Query: 133 ------VPDAVTQAIYQ 143
V D + + I +
Sbjct: 112 IASVLKVSDVILEKIRE 128
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKG- 577
E ++Q+++++P++ G++IGKGG ++ ++ SG + ++ ++ P + ER +KG
Sbjct: 52 EDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGK 111
Query: 578 ------VPDAVTQAIYQ 588
V D + + I +
Sbjct: 112 IASVLKVSDVILEKIRE 128
>gi|68473490|ref|XP_719303.1| hypothetical protein CaO19.13072 [Candida albicans SC5314]
gi|46441115|gb|EAL00415.1| hypothetical protein CaO19.13072 [Candida albicans SC5314]
Length = 369
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 13/177 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
R ++ KE G +IG +G+ + +R E+ +K IS + ERI+TV G +D +A S
Sbjct: 73 YRVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSGKLDDCAKALS 132
Query: 500 -----LITKNIEEFHKNQNKHLGG--NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
LI NIE ++ K L N E I LRL++P SQ G++IG G++I+ ++
Sbjct: 133 YFAQALINANIESYNYFPLKQLSSTPNTEETTI-LRLLIPNSQMGTLIGSKGARIQQLQN 191
Query: 553 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 607
S+ + LP S ER V ++G D + ++ I CLI S G T Y P
Sbjct: 192 NFNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIEDFSSIVGTTY-YVP 247
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS---- 54
+ KE G +IG +G+ + +R E+ +K IS + ERI+TV G +D +A S
Sbjct: 77 VSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSGKLDDCAKALSYFAQ 136
Query: 55 -LITKNIEEFHKNQNKHLGG--NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
LI NIE ++ K L N E I LRL++P SQ G++IG G++I+ ++
Sbjct: 137 ALINANIESYNYFPLKQLSSTPNTEETTI-LRLLIPNSQMGTLIGSKGARIQQLQNNFNI 195
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 162
S+ + LP S ER V ++G D + ++ I CLI S G T Y P
Sbjct: 196 SMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIEDFSSIVGTTY-YVP 247
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+ T ++ PN+++GA+IGK G++I +RK+SGAMI IS++ E E N+R T+TG+ A
Sbjct: 287 KTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEAIEGE---NERVFTITGSSHA 343
Query: 321 IALAQYLI 328
+ A+ +I
Sbjct: 344 VDKAKQMI 351
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
+ T ++ PN+++GA+IGK G++I +RK+SGAMI IS++ E E N+R T+TG+ A
Sbjct: 287 KTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEAIEGE---NERVFTITGSSHA 343
Query: 766 IALAQYLI 773
+ A+ +I
Sbjct: 344 VDKAKQMI 351
>gi|68473725|ref|XP_719187.1| hypothetical protein CaO19.5627 [Candida albicans SC5314]
gi|46440993|gb|EAL00294.1| hypothetical protein CaO19.5627 [Candida albicans SC5314]
Length = 368
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 13/177 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
R ++ KE G +IG +G+ + +R E+ +K IS + ERI+TV G +D +A S
Sbjct: 72 YRVLVSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSGKLDDCAKALS 131
Query: 500 -----LITKNIEEFHKNQNKHLGG--NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
LI NIE ++ K L N E I LRL++P SQ G++IG G++I+ ++
Sbjct: 132 YFAQALINANIESYNYFPLKQLSSTPNTEETTI-LRLLIPNSQMGTLIGSKGARIQQLQN 190
Query: 553 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 607
S+ + LP S ER V ++G D + ++ I CLI S G T Y P
Sbjct: 191 NFNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIEDFSSIVGTTY-YVP 246
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS---- 54
+ KE G +IG +G+ + +R E+ +K IS + ERI+TV G +D +A S
Sbjct: 76 VSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSGKLDDCAKALSYFAQ 135
Query: 55 -LITKNIEEFHKNQNKHLGG--NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
LI NIE ++ K L N E I LRL++P SQ G++IG G++I+ ++
Sbjct: 136 ALINANIESYNYFPLKQLSSTPNTEETTI-LRLLIPNSQMGTLIGSKGARIQQLQNNFNI 194
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRP 162
S+ + LP S ER V ++G D + ++ I CLI S G T Y P
Sbjct: 195 SMIASKSFLPGSNERLVELQGTVDDLYDSLRIISRCLIEDFSSIVGTTY-YVP 246
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+ T ++ PN+++GA+IGK G++I +RK+SGAMI IS++ E E N+R T+TG+ A
Sbjct: 286 KTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEAIEGE---NERVFTITGSSHA 342
Query: 321 IALAQYLI 328
+ A+ +I
Sbjct: 343 VDKAKQMI 350
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
+ T ++ PN+++GA+IGK G++I +RK+SGAMI IS++ E E N+R T+TG+ A
Sbjct: 286 KTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEAIEGE---NERVFTITGSSHA 342
Query: 766 IALAQYLI 773
+ A+ +I
Sbjct: 343 VDKAKQMI 350
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 144/349 (41%), Gaps = 75/349 (21%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAF- 498
R + +G +IGKSG +K+L++ +G KI + + S +P+R+VTVIGS R F
Sbjct: 55 FRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRVFL 114
Query: 499 ----------SLITKNIEEFHKNQNKHLGGNGE---------SQLIQLRLIVPASQCGSI 539
+K E K + L E ++ RL+ +Q GS+
Sbjct: 115 EQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVGSV 174
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNS---TEREVNIKGVPDAVTQAIYQICLIMVDS 596
IGKGG ++ IR+ SG + V +D LP ++ + I+G A+ +A+ + + D
Sbjct: 175 IGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQDC 234
Query: 597 PP--KGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA-PDMGNNPLAGLAALGLGGNSGG 653
PP K P + P L + +NS++ P N +G+ +L
Sbjct: 235 PPSEKRTVRPAEAVIHET-LPDLHMDHILQRNSVLPILPSSSNIFASGIHSL-------- 285
Query: 654 GMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTV 713
++A L P TN Q + ++
Sbjct: 286 ----SIDADML-------------------------------PPVDTNVAQQDVVFKILC 310
Query: 714 PNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
N+ IG VIGKGGT + ++ SGA + + S ++R I++T +
Sbjct: 311 ANDRIGGVIGKGGTIVRALQNESGATVSVGPSV---TGCDERLISITAS 356
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 142/345 (41%), Gaps = 75/345 (21%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAF----- 53
+G +IGKSG +K+L++ +G KI + + S +P+R+VTVIGS R F
Sbjct: 59 CHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRVFLEQNS 118
Query: 54 ------SLITKNIEEFHKNQNKHLGGNGE---------SQLIQLRLIVPASQCGSIIGKG 98
+K E K + L E ++ RL+ +Q GS+IGKG
Sbjct: 119 GASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVGSVIGKG 178
Query: 99 GSQIKTIRETSGASVYVASDMLPNS---TEREVNIKGVPDAVTQAIYQICLIMVDSPP-- 153
G ++ IR+ SG + V +D LP ++ + I+G A+ +A+ + + D PP
Sbjct: 179 GKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQDCPPSE 238
Query: 154 KGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGA-PDMGNNPLAGLAALGLGGNSGGGMGG 212
K P + P L + +NS++ P N +G+ +L
Sbjct: 239 KRTVRPAEAVIHET-LPDLHMDHILQRNSVLPILPSSSNIFASGIHSL------------ 285
Query: 213 GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNEL 272
++A L P TN Q + ++ N+
Sbjct: 286 SIDADML-------------------------------PPVDTNVAQQDVVFKILCANDR 314
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
IG VIGKGGT + ++ SGA + + S ++R I++T +
Sbjct: 315 IGGVIGKGGTIVRALQNESGATVSVGPSV---TGCDERLISITAS 356
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 148/342 (43%), Gaps = 74/342 (21%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRI-SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 331
+G+VIGKGG + +IRK SG IR+ + +D I + G D A+ + L+ +S
Sbjct: 171 VGSVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEG--DVWAIKKALLAVS 228
Query: 332 VEL-------LRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQIL 384
L R E + D D+ L ++ L L +S+ + A
Sbjct: 229 RRLQDCPPSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIFA--------- 279
Query: 385 TKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRH 444
+ + +L +D+L P N+ V ++
Sbjct: 280 ---------SGIHSLSIDADMLP--------------------PVDTNVAQQDVVFKI-- 308
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGS--MDSLF----R 496
+ +G +IGK G V+ L+ ESG+ + + S T ER++++ S ++S + +
Sbjct: 309 LCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYSPAQK 368
Query: 497 AFSLITKN-----IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
A L+ IE++ ++ +K + RL+VP++Q G ++GKGG I IR
Sbjct: 369 AVVLVFSRSVDVAIEKWQESSSK-------GSPVVARLVVPSNQVGCVLGKGGVIISEIR 421
Query: 552 ETSGASV-YVASDMLPNS---TEREVNIKGVPDAVTQAIYQI 589
+ +G ++ ++SD +PN ++ V I G V A+Y +
Sbjct: 422 KVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNV 463
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 24/157 (15%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGS--MDSLF----RAFSLI 56
+G +IGK G V+ L+ ESG+ + + S T ER++++ S ++S + +A L+
Sbjct: 314 RIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYSPAQKAVVLV 373
Query: 57 TKN-----IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
IE++ ++ +K + RL+VP++Q G ++GKGG I IR+ +G
Sbjct: 374 FSRSVDVAIEKWQESSSK-------GSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTGT 426
Query: 112 SV-YVASDMLPNS---TEREVNIKGVPDAVTQAIYQI 144
++ ++SD +PN ++ V I G V A+Y +
Sbjct: 427 NIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNV 463
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 33/275 (12%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS--NDR 310
Q+++ + + + + VP+ +G V+GKGG I EIRK++G IRI S + + +D
Sbjct: 386 QESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDE 445
Query: 311 TITMTGTPDAIALAQYLI------NMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL 364
+ ++G + A Y + N+ +L + GGG S + S + +APL
Sbjct: 446 IVQISGEFSNVQDALYNVTGRLRDNLFSSVLSNSGTRNGGGTSVYPETSPYGRVRDTAPL 505
Query: 365 AGLNASNPLAAALPQLAQILTKP-----GALNALTSLSALG-----GLSDLLGGGSSGGG 414
S P+ + Q T G ++L S S+ G LS + S G
Sbjct: 506 V---RSTPVGTSHGSFMQHSTAQSSDDLGLSHSLDSPSSPGLWPPQSLSGISSRAISDAG 562
Query: 415 SGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSII-GKSGETVKKLREESGSKI 473
G GV G + +T V I+ +V S++ G++G + +LR+ SG+K+
Sbjct: 563 RGLPSHRSGVQLG---SGNKTAIVTNTTVEIVVPDDVISLVYGENGTNLTRLRQISGAKV 619
Query: 474 YIS--DSSTPERIVTVIGSMD------SLFRAFSL 500
+ D T +R++ + G+ D SL AF L
Sbjct: 620 IVHEPDPITSDRLIVISGTPDETQAAQSLLHAFIL 654
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+ VP+++I V G+ GT + +R+ISGA + + E + ++DR I ++GTPD
Sbjct: 587 TVEIVVPDDVISLVYGENGTNLTRLRQISGAKVIV---HEPDPITSDRLIVISGTPDETQ 643
Query: 768 LAQYLIN 774
AQ L++
Sbjct: 644 AAQSLLH 650
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 698 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS--NDR 755
Q+++ + + + + VP+ +G V+GKGG I EIRK++G IRI S + + +D
Sbjct: 386 QESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDE 445
Query: 756 TITMTGTPDAIALAQYLI------NMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL 809
+ ++G + A Y + N+ +L + GGG S + S + +APL
Sbjct: 446 IVQISGEFSNVQDALYNVTGRLRDNLFSSVLSNSGTRNGGGTSVYPETSPYGRVRDTAPL 505
Query: 810 A 810
Sbjct: 506 V 506
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 91/186 (48%), Gaps = 30/186 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIG---------- 489
R++ +++GSIIG+ GE K+LR ES S I IS++ ERIVT+
Sbjct: 52 YRYLCPLRKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSNSEESNLFGD 111
Query: 490 -------SMDSLFRAFSLITKNIEEFHKNQNKHLG-------GNGESQLIQLRLIVPASQ 535
+ D+LF I N N+ G + Q++ +R++VPA Q
Sbjct: 112 SGEFVCPAQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRMLVPADQ 171
Query: 536 CGSIIGKGGSQIKTIRETSGASVYVASDM----LPNSTEREVNIKGVPDAVTQAIYQICL 591
G +IGKGG I++IR +GA + + D L S++ + I G P V +A+YQ+
Sbjct: 172 IGCVIGKGGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAVVRKALYQVAT 231
Query: 592 IMVDSP 597
+ ++P
Sbjct: 232 RLHENP 237
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 30/179 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIG----------------- 44
+++GSIIG+ GE K+LR ES S I IS++ ERIVT+
Sbjct: 59 RKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSNSEESNLFGDSGEFVCP 118
Query: 45 SMDSLFRAFSLITKNIEEFHKNQNKHLG-------GNGESQLIQLRLIVPASQCGSIIGK 97
+ D+LF I N N+ G + Q++ +R++VPA Q G +IGK
Sbjct: 119 AQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRMLVPADQIGCVIGK 178
Query: 98 GGSQIKTIRETSGASVYVASDM----LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
GG I++IR +GA + + D L S++ + I G P V +A+YQ+ + ++P
Sbjct: 179 GGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAVVRKALYQVATRLHENP 237
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 21 REESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQ 78
R+ES + I + DSS E + I + + + +T + + K +G+S
Sbjct: 323 RQESRASIKV-DSSAAEGDDCIIFISAKEFFEDQSATLTAALRLQPRCSEKTERDSGDS- 380
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDMLPNSTERE---VNIKGVP 134
+I RL+VP SQ G ++GKGG+ I +R + AS+ + A D LP + V I G
Sbjct: 381 VITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNLPKVASEDDEMVQITGSH 440
Query: 135 DAVTQAIYQICL 146
D + A+ + L
Sbjct: 441 DVASNALLHVVL 452
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 466 REESGSKIYISDSSTPE--RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQ 523
R+ES + I + DSS E + I + + + +T + + K +G+S
Sbjct: 323 RQESRASIKV-DSSAAEGDDCIIFISAKEFFEDQSATLTAALRLQPRCSEKTERDSGDS- 380
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDMLPNSTERE---VNIKGVP 579
+I RL+VP SQ G ++GKGG+ I +R + AS+ + A D LP + V I G
Sbjct: 381 VITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNLPKVASEDDEMVQITGSH 440
Query: 580 DAVTQAIYQICL 591
D + A+ + L
Sbjct: 441 DVASNALLHVVL 452
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 252 SQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE--EEEDS 307
S+KT + + IT + VP IG ++GKGG I E+R ++ A IRI +
Sbjct: 370 SEKTERDSGDSVITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNLPKVASE 429
Query: 308 NDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+D + +TG+ D + A L+++ V L+ANL G G
Sbjct: 430 DDEMVQITGSHDVASNA--LLHV-VLRLKANLFGRDGA 464
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 697 SQKTNQQ--QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE--EEEDS 752
S+KT + + IT + VP IG ++GKGG I E+R ++ A IRI +
Sbjct: 370 SEKTERDSGDSVITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNLPKVASE 429
Query: 753 NDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 790
+D + +TG+ D + A L+++ V L+ANL G G
Sbjct: 430 DDEMVQITGSHDVASNA--LLHV-VLRLKANLFGRDGA 464
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE--EEEDSNDRTITMT 315
++ +T M VP + IG VIGKGG I IR +GA IRI K S+D + +
Sbjct: 157 KEQVVTVRMLVPADQIGCVIGKGGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLII 216
Query: 316 GTPDAIALAQYLI 328
G P + A Y +
Sbjct: 217 GEPAVVRKALYQV 229
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSE--EEEDSNDRTITMT 760
++ +T M VP + IG VIGKGG I IR +GA IRI K S+D + +
Sbjct: 157 KEQVVTVRMLVPADQIGCVIGKGGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLII 216
Query: 761 GTPDAIALAQYLI 773
G P + A Y +
Sbjct: 217 GEPAVVRKALYQV 229
>gi|427792951|gb|JAA61927.1| Putative rna-binding protein nova1/pasilla, partial [Rhipicephalus
pulchellus]
Length = 448
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 24/169 (14%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
G+IIGK GET+ L++E+G+++ +S S+ T ER+ + GS++ + R I + I+
Sbjct: 50 GAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLRIHEFIMEKIK 109
Query: 62 E-----------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 110
E F Q + Q++++VP S G IIGKGGS IK I+E SG
Sbjct: 110 EKPDPTAKIAIDFDHKQP-------AEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESG 162
Query: 111 ASVYVASDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
A V ++ ++ ER + + G D +A I +V+ P G+ +
Sbjct: 163 AYVQISQKSKDHALAERCITVIGEMDNNKKACQLILAKIVEDPQSGSCL 211
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 24/169 (14%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
G+IIGK GET+ L++E+G+++ +S S+ T ER+ + GS++ + R I + I+
Sbjct: 50 GAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLRIHEFIMEKIK 109
Query: 507 E-----------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSG 555
E F Q + Q++++VP S G IIGKGGS IK I+E SG
Sbjct: 110 EKPDPTAKIAIDFDHKQP-------AEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESG 162
Query: 556 ASVYVASDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
A V ++ ++ ER + + G D +A I +V+ P G+ +
Sbjct: 163 AYVQISQKSKDHALAERCITVIGEMDNNKKACQLILAKIVEDPQSGSCL 211
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS----DSSTPERI 484
++ + Q +++++ ++ G IIGK G +K+++EESG+ + IS D + ER
Sbjct: 121 DFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERC 180
Query: 485 VTVIGSMDSLFRAFSLITKNIEE 507
+TVIG MD+ +A LI I E
Sbjct: 181 ITVIGEMDNNKKACQLILAKIVE 203
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 73 GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNI 130
GNG +++VPA G+IIGKGG I +++ +GA V ++ D P +TER I
Sbjct: 34 GNGT---FHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLI 90
Query: 131 KGVPDAVTQAIYQICLIMVDSPP 153
G + V + I++ + + P
Sbjct: 91 TGSVEGVLR-IHEFIMEKIKEKP 112
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 518 GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNI 575
GNG +++VPA G+IIGKGG I +++ +GA V ++ D P +TER I
Sbjct: 34 GNGT---FHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLI 90
Query: 576 KGVPDAVTQAIYQICLIMVDSPP 598
G + V + I++ + + P
Sbjct: 91 TGSVEGVLR-IHEFIMEKIKEKP 112
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
D ++ +++ Q+ ++ VPN G +IGKGG+ I +I++ SGA ++IS+ S++ +
Sbjct: 121 DFDHKQPAEREKQV--KILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALA- 177
Query: 309 DRTITMTGTPD 319
+R IT+ G D
Sbjct: 178 ERCITVIGEMD 188
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 694 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
D ++ +++ Q+ ++ VPN G +IGKGG+ I +I++ SGA ++IS+ S++ +
Sbjct: 121 DFDHKQPAEREKQV--KILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALA- 177
Query: 754 DRTITMTGTPD 764
+R IT+ G D
Sbjct: 178 ERCITVIGEMD 188
>gi|395733402|ref|XP_003776232.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Pongo
abelii]
Length = 462
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 23/181 (12%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKN 504
++Q K G++ GK G+ +K L + + + + DSS P+RI+T+ +D++ I
Sbjct: 48 LLQSKNAGAMTGKGGKNIKALPTDYNASVSVPDSSGPQRILTISADIDTIGEILKKIIPT 107
Query: 505 IEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGG 544
+EE + N + G + + +LRL++ S G II G
Sbjct: 108 LEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD---YELRLLIHQSLAGGIIRVKG 164
Query: 545 SQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 604
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG P
Sbjct: 165 VKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDWVVECIKIILDLIPESPIKGRAQP 224
Query: 605 Y 605
Y
Sbjct: 225 Y 225
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++ GK G+ +K L + + + + DSS P+RI+T+ +D++ I +
Sbjct: 49 LQSKNAGAMTGKGGKNIKALPTDYNASVSVPDSSGPQRILTISADIDTIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +LRL++ S G II G
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD---YELRLLIHQSLAGGIIRVKGV 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDWVVECIKIILDLIPESPIKGRAQPY 225
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G+VIGKGG +I +I SGA I+I E E S DR IT+TGT + I
Sbjct: 386 ITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKI---DEPLEGSEDRIITITGTQEQI 442
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 443 QNAQYLLQNSVK 454
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G+VIGKGG +I +I SGA I+I E E S DR IT+TGT + I
Sbjct: 386 ITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKI---DEPLEGSEDRIITITGTQEQI 442
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 443 QNAQYLLQNSVK 454
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I ++ +P GS+IGKGG +IK I SGAS+ + + L S +R + I G + +
Sbjct: 386 ITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKI-DEPLEGSEDRIITITGTQEQIQN 444
Query: 140 AIY 142
A Y
Sbjct: 445 AQY 447
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I ++ +P GS+IGKGG +IK I SGAS+ + + L S +R + I G + +
Sbjct: 386 ITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKI-DEPLEGSEDRIITITGTQEQIQN 444
Query: 585 AIY 587
A Y
Sbjct: 445 AQY 447
>gi|47085903|ref|NP_998309.1| far upstream element-binding protein 1 [Danio rerio]
gi|40555849|gb|AAH64649.1| Far upstream element (FUSE) binding protein 1 [Danio rerio]
Length = 642
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE- 62
VG IIG+ GE + +L++ESG KI I+ S P+R VT+ GS D++ A L+++ +E+
Sbjct: 101 VGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGSPDAIMTAKRLLSEIVEKG 160
Query: 63 -----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
FH N + + +++PAS+ G +IGKGG IK ++E +G + +
Sbjct: 161 RPSPAFHHNDGPGMSVH--------EMMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ 212
Query: 118 DMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 150
D N+ ++ + I G P V QA + ++ D
Sbjct: 213 DGPQNTGADKPLRISGDPFKVQQAKDMVMDLIRD 246
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 17/154 (11%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE- 507
VG IIG+ GE + +L++ESG KI I+ S P+R VT+ GS D++ A L+++ +E+
Sbjct: 101 VGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGSPDAIMTAKRLLSEIVEKG 160
Query: 508 -----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 562
FH N + + +++PAS+ G +IGKGG IK ++E +G + +
Sbjct: 161 RPSPAFHHNDGPGMSVH--------EMMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ 212
Query: 563 DMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 595
D N+ ++ + I G P V QA + ++ D
Sbjct: 213 DGPQNTGADKPLRISGDPFKVQQAKDMVMDLIRD 246
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+SGE +KK++ ++G +I D STPERI ++G D A +IT +
Sbjct: 279 VGIVIGRSGEMIKKIQNDTGVRIQFKPDDGSTPERIAQIMGPPDRAQHAADIITDLLRSV 338
Query: 64 H----------------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
N ++G G L + VP + G IIGKGG
Sbjct: 339 QAGGPPGHGGGGGGGGGGRGRGRGQGNWNMGPPGG--LQEFTFTVPTMKTGLIIGKGGET 396
Query: 102 IKTIRETSGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
IK I + SGA + + + PNS + ++G P + A
Sbjct: 397 IKNISQQSGARIELQRNPPPNSDPNIKIFTVRGSPQQIDYA 437
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+SGE +KK++ ++G +I D STPERI ++G D A +IT +
Sbjct: 279 VGIVIGRSGEMIKKIQNDTGVRIQFKPDDGSTPERIAQIMGPPDRAQHAADIITDLLRSV 338
Query: 509 H----------------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
N ++G G L + VP + G IIGKGG
Sbjct: 339 QAGGPPGHGGGGGGGGGGRGRGRGQGNWNMGPPGG--LQEFTFTVPTMKTGLIIGKGGET 396
Query: 547 IKTIRETSGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
IK I + SGA + + + PNS + ++G P + A
Sbjct: 397 IKNISQQSGARIELQRNPPPNSDPNIKIFTVRGSPQQIDYA 437
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+++E VP+ ++G +IG+GG +I +++ SG I+I+ S DR++T+TG+PDAI
Sbjct: 90 VSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDS---GGMPDRSVTLTGSPDAI 146
Query: 322 ALAQYLINMSVELLR 336
A+ L++ VE R
Sbjct: 147 MTAKRLLSEIVEKGR 161
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+++E VP+ ++G +IG+GG +I +++ SG I+I+ S DR++T+TG+PDAI
Sbjct: 90 VSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDS---GGMPDRSVTLTGSPDAI 146
Query: 767 ALAQYLINMSVELLR 781
A+ L++ VE R
Sbjct: 147 MTAKRLLSEIVEKGR 161
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP G +IGKGG I I + SGA I + ++ D N + T+ G+P I A+
Sbjct: 379 FTVPTMKTGLIIGKGGETIKNISQQSGARIELQRNPPPNSDPNIKIFTVRGSPQQIDYAR 438
Query: 326 YLINMSV 332
L+ +
Sbjct: 439 QLVEEKI 445
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP G +IGKGG I I + SGA I + ++ D N + T+ G+P I A+
Sbjct: 379 FTVPTMKTGLIIGKGGETIKNISQQSGARIELQRNPPPNSDPNIKIFTVRGSPQQIDYAR 438
Query: 771 YLINMSV 777
L+ +
Sbjct: 439 QLVEEKI 445
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 5 EVGSIIGKSGETVKKLREESGSK-IYISD---SSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G +IGK GET+K+L+E +G K + I D ++ ++ + + G + +A ++ I
Sbjct: 185 KAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKDMVMDLI 244
Query: 61 -EEFHKNQNKHLGGNGESQLIQ---LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
++ + Q G L + VP G +IG+ G IK I+ +G +
Sbjct: 245 RDQGFREQRGEYGSRAGGGGGGGESLDVPVPRFAVGIVIGRSGEMIKKIQNDTGVRIQFK 304
Query: 117 SDMLPNSTEREVNIKGVPDAVTQA 140
D ++ ER I G PD A
Sbjct: 305 PDDG-STPERIAQIMGPPDRAQHA 327
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 450 EVGSIIGKSGETVKKLREESGSK-IYISD---SSTPERIVTVIGSMDSLFRAFSLITKNI 505
+ G +IGK GET+K+L+E +G K + I D ++ ++ + + G + +A ++ I
Sbjct: 185 KAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKDMVMDLI 244
Query: 506 -EEFHKNQNKHLGGNGESQLIQ---LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++ + Q G L + VP G +IG+ G IK I+ +G +
Sbjct: 245 RDQGFREQRGEYGSRAGGGGGGGESLDVPVPRFAVGIVIGRSGEMIKKIQNDTGVRIQFK 304
Query: 562 SDMLPNSTEREVNIKGVPDAVTQA 585
D ++ ER I G PD A
Sbjct: 305 PDDG-STPERIAQIMGPPDRAQHA 327
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVN 129
G G + + VP G IIG+GG QI +++ SG + +A D +P+ R V
Sbjct: 82 GMGGPPRSVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPD---RSVT 138
Query: 130 IKGVPDAVTQA 140
+ G PDA+ A
Sbjct: 139 LTGSPDAIMTA 149
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVN 574
G G + + VP G IIG+GG QI +++ SG + +A D +P+ R V
Sbjct: 82 GMGGPPRSVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPD---RSVT 138
Query: 575 IKGVPDAVTQA 585
+ G PDA+ A
Sbjct: 139 LTGSPDAIMTA 149
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 63/340 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST---PERIVTVIGSMDSLFRAF 498
+R ++Q + VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCTNA- 247
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
K I E + + L GE I LR++ + G IIGKGG+ IK I + + +
Sbjct: 248 ---CKKIMEVTQQEAYGL-SKGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKI 300
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V+S D+ + ER + +KG D +++A I + S PQ+ PG
Sbjct: 301 TVSSINDINNFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQA---MAPQSLMFPG 357
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG-GMGGGLNAAALAALASSQLKTN 675
L +P+A ++ G+G +S G G+ G + A +S
Sbjct: 358 L-------------------HPMAMMSTAGMGYSSRGPGLYG--SGPAPYPYQTSLPTQQ 396
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
+P Q T + +PN +GA+IG G+ I I +
Sbjct: 397 GIPIGDTQE-----------------------TAFLYIPNTSVGAIIGSKGSHIRNIIRF 433
Query: 736 SGAMIRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 773
SGA ++I+ +++ E NDR +T+ G+P++ AQYLI
Sbjct: 434 SGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 473
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 152/336 (45%), Gaps = 63/336 (18%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSST---PERIVTVIGSMDSLFRAFSLIT 57
+Q + VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 193 VQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCTNA----C 248
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
K I E + + L GE I LR++ + G IIGKGG+ IK I + + + V+S
Sbjct: 249 KKIMEVTQQEAYGLS-KGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSS 304
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG D +++A I + S PQ+ PGL
Sbjct: 305 INDINNFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQA---MAPQSLMFPGL--- 358
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG-GMGGGLNAAALAALASSQLKTNHMPR 234
+P+A ++ G+G +S G G+ G + A +S +P
Sbjct: 359 ----------------HPMAMMSTAGMGYSSRGPGLYG--SGPAPYPYQTSLPTQQGIPI 400
Query: 235 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
Q T + +PN +GA+IG G+ I I + SGA
Sbjct: 401 GDTQE-----------------------TAFLYIPNTSVGAIIGSKGSHIRNIIRFSGAS 437
Query: 295 IRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 328
++I+ +++ E NDR +T+ G+P++ AQYLI
Sbjct: 438 VKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 473
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 57/307 (18%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+I+ + N LIG +IGKGGT I +I + + I +S ++ + +R IT+ G+ D
Sbjct: 266 EISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNLERIITVKGSIDN 325
Query: 321 IALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQL 380
++ A+ +I+ LR S +N+L + AP
Sbjct: 326 MSKAESMISSK---LRQ---------------SYENDLQAMAP----------------- 350
Query: 381 AQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSG--GFGGVPQGPNYANIQTTGV 438
Q L PG L+ + +S G +G S G G SG + P I
Sbjct: 351 -QSLMFPG-LHPMAMMSTAG-----MGYSSRGPGLYGSGPAPYPYQTSLPTQQGIPIGDT 403
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSM 491
Q + VG+IIG G ++ + SG+ + I+ + P +R VT++GS
Sbjct: 404 QETAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSP 463
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+S ++A LI F K + + G E + + ++VP++Q G IIGKGG ++ ++
Sbjct: 464 ESQWKAQYLI------FEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQ 517
Query: 552 ETSGASV 558
+G+ +
Sbjct: 518 RVTGSII 524
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 13/115 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ + P +R VT++GS +S ++A LI
Sbjct: 416 VGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI-- 473
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
F K + + G E + + ++VP++Q G IIGKGG ++ ++ +G+ +
Sbjct: 474 ----FEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSII 524
>gi|170580792|ref|XP_001895410.1| KH domain containing protein [Brugia malayi]
gi|158597654|gb|EDP35742.1| KH domain containing protein [Brugia malayi]
Length = 439
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 60
VG++IGK GET++ L+ ESG ++ +S + T ERI V G + S+ + +I + I
Sbjct: 45 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKVSDVILEKI 104
Query: 61 EEFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-- 116
E N G + +++L+VP + G +IGK G++IK IRE +GA++ V
Sbjct: 105 REKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPK 164
Query: 117 --SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG--ATIP 159
S S ER + I D V Q L V + P+ ATIP
Sbjct: 165 AGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAADPQHAMATIP 211
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 505
VG++IGK GET++ L+ ESG ++ +S + T ERI V G + S+ + +I + I
Sbjct: 45 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKVSDVILEKI 104
Query: 506 EEFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-- 561
E N G + +++L+VP + G +IGK G++IK IRE +GA++ V
Sbjct: 105 REKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPK 164
Query: 562 --SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG--ATIP 604
S S ER + I D V Q L V + P+ ATIP
Sbjct: 165 AGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAADPQHAMATIP 211
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 242 QHNRNNRDGPSQK----TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
+ +R+ R GP+ K + + N + ++ +P+ +GA+IGKGG + ++ SG +++
Sbjct: 10 KRSRDERGGPATKKAHVSETEDNMVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQM 69
Query: 298 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 357
SK+ E +N+R + G IA + ++ +E +R + DNN
Sbjct: 70 SKNQEVYPGTNERICLVKGK---IASVLKVSDVILEKIREKV---------------DNN 111
Query: 358 LPSS-APLAGLNASNPLAAALP 378
PS G+ N + +P
Sbjct: 112 TPSDIFDHKGMERKNEMKLVVP 133
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 687 QHNRNNRDGPSQK----TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 742
+ +R+ R GP+ K + + N + ++ +P+ +GA+IGKGG + ++ SG +++
Sbjct: 10 KRSRDERGGPATKKAHVSETEDNMVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQM 69
Query: 743 SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 802
SK+ E +N+R + G IA + ++ +E +R + DNN
Sbjct: 70 SKNQEVYPGTNERICLVKGK---IASVLKVSDVILEKIREKV---------------DNN 111
Query: 803 LPSS-APLAGLNASNPLAAALP 823
PS G+ N + +P
Sbjct: 112 TPSDIFDHKGMERKNEMKLVVP 133
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRTITMTGTPDAIA 322
++ VPN G VIGK G +I EIR+ +GA I++ S+E + S +R IT+ D +
Sbjct: 129 KLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVL 188
Query: 323 L 323
+
Sbjct: 189 M 189
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRTITMTGTPDAIA 767
++ VPN G VIGK G +I EIR+ +GA I++ S+E + S +R IT+ D +
Sbjct: 129 KLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVL 188
Query: 768 L 768
+
Sbjct: 189 M 189
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKG 132
E ++Q+++++P++ G++IGKGG ++ ++ SG + ++ ++ P + ER +KG
Sbjct: 30 EDNMVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKG 88
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 120 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 179
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
A S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 180 AHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 239
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 240 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 289
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L A S I + +
Sbjct: 130 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAAHSFIAEKVR 189
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 190 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 249
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 250 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 289
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 478 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 537
Query: 325 QYLINMSV 332
QYLI+ V
Sbjct: 538 QYLISQRV 545
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 478 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 537
Query: 770 QYLINMSV 777
QYLI+ V
Sbjct: 538 QYLISQRV 545
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+ A
Sbjct: 121 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAA 180
Query: 325 QYLINMSV 332
I V
Sbjct: 181 HSFIAEKV 188
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+ A
Sbjct: 121 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAA 180
Query: 770 QYLINMSV 777
I V
Sbjct: 181 HSFIAEKV 188
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 112 TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 171
Query: 132 GVPDAVTQA 140
G +A+ A
Sbjct: 172 GTAEALNAA 180
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 112 TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 171
Query: 577 GVPDAVTQA 585
G +A+ A
Sbjct: 172 GTAEALNAA 180
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 424 VPQG---PNYANI---QTTGVQRRMRH---IMQGKEVGSIIGKSGETVKKLREESGSKIY 474
+PQ P NI QTT R + I+ G IIGK G TVK + E+SG+ +
Sbjct: 191 IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQ 250
Query: 475 ISDS----STPERIVTVIGSMDSLFRAFSLITKNIEE 507
+S + ER+VTV G + + +A S I + ++E
Sbjct: 251 LSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 287
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 126
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 466 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 523
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G P A A Y I
Sbjct: 524 RVTITGSPAATQAAQYLI 541
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 571
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 466 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 523
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G P A A Y I
Sbjct: 524 RVTITGSPAATQAAQYLI 541
>gi|297670563|ref|XP_002813434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Pongo abelii]
Length = 464
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 23/181 (12%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKN 504
++Q K G++ GK G+ +K L + + + + DSS P+RI+T+ +D++ I
Sbjct: 48 LLQSKNAGAMTGKGGKNIKALPTDYNASVSVPDSSGPQRILTISADIDTIGEILKKIIPT 107
Query: 505 IEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGG 544
+EE + N + G + + +LRL++ S G II G
Sbjct: 108 LEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD---YELRLLIHQSLAGGIIRVKG 164
Query: 545 SQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIP 604
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG P
Sbjct: 165 VKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDWVVECIKIILDLIPESPIKGRAQP 224
Query: 605 Y 605
Y
Sbjct: 225 Y 225
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++ GK G+ +K L + + + + DSS P+RI+T+ +D++ I +
Sbjct: 49 LQSKNAGAMTGKGGKNIKALPTDYNASVSVPDSSGPQRILTISADIDTIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +LRL++ S G II G
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD---YELRLLIHQSLAGGIIRVKGV 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDWVVECIKIILDLIPESPIKGRAQPY 225
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G+VIGKGG +I +I SGA I+I E E S DR IT+TGT + I
Sbjct: 386 ITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKI---DEPLEGSEDRIITITGTQEQI 442
Query: 322 ALAQYLINMSVELLR 336
AQYL+ SV+ ++
Sbjct: 443 QNAQYLLQNSVKHVK 457
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G+VIGKGG +I +I SGA I+I E E S DR IT+TGT + I
Sbjct: 386 ITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKI---DEPLEGSEDRIITITGTQEQI 442
Query: 767 ALAQYLINMSVELLR 781
AQYL+ SV+ ++
Sbjct: 443 QNAQYLLQNSVKHVK 457
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I ++ +P GS+IGKGG +IK I SGAS+ + + L S +R + I G + +
Sbjct: 386 ITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKI-DEPLEGSEDRIITITGTQEQIQN 444
Query: 140 AIY 142
A Y
Sbjct: 445 AQY 447
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I ++ +P GS+IGKGG +IK I SGAS+ + + L S +R + I G + +
Sbjct: 386 ITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKI-DEPLEGSEDRIITITGTQEQIQN 444
Query: 585 AIY 587
A Y
Sbjct: 445 AQY 447
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 145/352 (41%), Gaps = 98/352 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG---------- 489
R++ K++GS+IG+ GE VK+LR ++ SKI I ++ ER++T+
Sbjct: 46 FRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGD 105
Query: 490 -------SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+ D+LFR + + + GE Q + +L+VP+ Q G I+G+
Sbjct: 106 GEKVLSPAQDALFRIHDRVVAD------DAQSEDSSEGEQQ-VTAKLLVPSDQIGCILGR 158
Query: 543 GGSQIKTIRETSGASVYVASD----MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
GG ++ IR +GA + + D + +++ + I G V +A++QI + ++P
Sbjct: 159 GGQIVQNIRSETGAQIRIIKDRNMPLCALNSDELIQISGEVLIVKKALHQIASRLHENPS 218
Query: 599 KGATI---------PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGG 649
+ + P L +AGGP L+G AP MG+ G
Sbjct: 219 RSQNLLSSAISGGYPSGSLMSHAGGPRLVGI----------APLMGSY-----------G 257
Query: 650 NSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 709
GG L PRN D P+ +
Sbjct: 258 RDGGDWSRPLYQP---------------PRN-------------DPPA-------TEFFI 282
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
+ P E I +VIGKGG I ++R+ + A I++ S E ND IT++
Sbjct: 283 RLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTE---GNDCLITISA 331
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 142/345 (41%), Gaps = 98/345 (28%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIG----------------- 44
K++GS+IG+ GE VK+LR ++ SKI I ++ ER++T+
Sbjct: 53 KKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSP 112
Query: 45 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
+ D+LFR + + + GE Q + +L+VP+ Q G I+G+GG ++
Sbjct: 113 AQDALFRIHDRVVAD------DAQSEDSSEGEQQ-VTAKLLVPSDQIGCILGRGGQIVQN 165
Query: 105 IRETSGASVYVASD----MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI-- 158
IR +GA + + D + +++ + I G V +A++QI + ++P + +
Sbjct: 166 IRSETGAQIRIIKDRNMPLCALNSDELIQISGEVLIVKKALHQIASRLHENPSRSQNLLS 225
Query: 159 -------PYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMG 211
P L +AGGP L+G AP MG+ G GG
Sbjct: 226 SAISGGYPSGSLMSHAGGPRLVGI----------APLMGSY-----------GRDGGDWS 264
Query: 212 GGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 271
L PRN D P+ + + P E
Sbjct: 265 RPLYQP---------------PRN-------------DPPA-------TEFFIRLVSPVE 289
Query: 272 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
I +VIGKGG I ++R+ + A I++ S E ND IT++
Sbjct: 290 NIASVIGKGGALINQLRQETRATIKVDSSRTE---GNDCLITISA 331
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 150/347 (43%), Gaps = 46/347 (13%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
D S+ +++ + Q+T ++ VP++ IG ++G+GG + IR +GA IRI K
Sbjct: 128 DAQSEDSSEGEQQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIIK--------- 178
Query: 309 DRTITMTGTPDAIAL-AQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGL 367
DR + + AL + LI +S E+L ++ S NL SSA
Sbjct: 179 DRNMPLC------ALNSDELIQISGEVLIVKKALHQIASRLHENPSRSQNLLSSA----- 227
Query: 368 NASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQG 427
++ P G+L + L G++ L+G GG + +
Sbjct: 228 -----ISGGYPS--------GSLMSHAGGPRLVGIAPLMGSYGRDGGDWSRPLYQPPRND 274
Query: 428 PNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTV 487
P + +R + + + S+IGK G + +LR+E+ + I + S T +
Sbjct: 275 P-------PATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLI 327
Query: 488 IGSMDSLFR-AFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
S +F A+S + + ++ + + RL+VP+S+ G I+GKGG+
Sbjct: 328 TISAREVFEDAYSPTIEAVMRLQPKCSEKVERDSGLVSFTTRLLVPSSRIGCILGKGGAI 387
Query: 547 IKTIRETSGASVYV-ASDMLP---NSTEREVNIKGVPDAVTQAIYQI 589
I +R + A++ + + LP + + V I G D +A+ QI
Sbjct: 388 ITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQI 434
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFR-AFSLITKNIEEFH 64
+ S+IGK G + +LR+E+ + I + S T + S +F A+S + +
Sbjct: 291 IASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQ 350
Query: 65 KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-ASDMLP-- 121
++ + + RL+VP+S+ G I+GKGG+ I +R + A++ + + LP
Sbjct: 351 PKCSEKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKV 410
Query: 122 -NSTEREVNIKGVPDAVTQAIYQI 144
+ + V I G D +A+ QI
Sbjct: 411 ASDDDEMVQISGELDVAKEALIQI 434
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 151/346 (43%), Gaps = 34/346 (9%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG +IGK G VK L+ E+G+ I + + ER++T+ S + R I
Sbjct: 230 RVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILV 289
Query: 63 FHKNQN----KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV-YVAS 117
F+++ K L + + RL+VP++Q G ++GKGG+ I +R+ SGA + + S
Sbjct: 290 FNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGS 349
Query: 118 DMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDS--PPK---GATIPYRPLPQNAGG 169
D +P ++ V I G V +Y I + D+ P K GA I
Sbjct: 350 DQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISP 409
Query: 170 PGLIGN--QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
G + + FG+ +S+ +P + + L G+ L+ L SQ
Sbjct: 410 YGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHL------GLSHSLDHPTSPRLWPSQT 463
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
T PRN G K+ N T E+ +P +IG+V G+ G + +
Sbjct: 464 VTGVNPRNIKGGIEL-------GSGSKSAIITNT-TVEIVIPENVIGSVYGENGNNLARL 515
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
RKISGA + + E ++DR + ++GTPD AQ L+ +
Sbjct: 516 RKISGAKVTL---HEPRPGTSDRIVIISGTPDETQAAQSLLQAFIH 558
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 151/346 (43%), Gaps = 34/346 (9%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG +IGK G VK L+ E+G+ I + + ER++T+ S + R I
Sbjct: 230 RVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILV 289
Query: 508 FHKNQN----KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV-YVAS 562
F+++ K L + + RL+VP++Q G ++GKGG+ I +R+ SGA + + S
Sbjct: 290 FNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGS 349
Query: 563 DMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDS--PPK---GATIPYRPLPQNAGG 614
D +P ++ V I G V +Y I + D+ P K GA I
Sbjct: 350 DQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISP 409
Query: 615 PGLIGN--QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G + + FG+ +S+ +P + + L G+ L+ L SQ
Sbjct: 410 YGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHL------GLSHSLDHPTSPRLWPSQT 463
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
T PRN G K+ N T E+ +P +IG+V G+ G + +
Sbjct: 464 VTGVNPRNIKGGIEL-------GSGSKSAIITNT-TVEIVIPENVIGSVYGENGNNLARL 515
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
RKISGA + + E ++DR + ++GTPD AQ L+ +
Sbjct: 516 RKISGAKVTL---HEPRPGTSDRIVIISGTPDETQAAQSLLQAFIH 558
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 117/257 (45%), Gaps = 31/257 (12%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE--DSNDRTITMTGTPD 319
++ + VP+ +G ++GKGGT I E+RK SGA IRI S + + ND+ + ++G
Sbjct: 311 VSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFV 370
Query: 320 AIALAQYLINMSVELLRAN------LNGEG-GGESNMDDFSSDNNLPSSAPLAGLNASNP 372
+ Y I LR N LNG G S M++ S + A GL++S
Sbjct: 371 NVQDGLYHITGR---LRDNLFPSKTLNGAGIRSSSAMNEISPYGRVRDPASF-GLHSS-- 424
Query: 373 LAAALPQLAQILTKPGALNAL-TSLSALGGLSDLLGGGSSGGGSGNSGGFGGVP--QGPN 429
P ++ T +++ L S S S L + G GG+ G
Sbjct: 425 -VGVSPSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGIELGSGSK 483
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTV 487
A I T V+ ++ +GS+ G++G + +LR+ SG+K+ + + T +RIV +
Sbjct: 484 SAIITNTTVEI----VIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVII 539
Query: 488 IGSMD------SLFRAF 498
G+ D SL +AF
Sbjct: 540 SGTPDETQAAQSLLQAF 556
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 60
VG++IGK GET++ L+ ESG ++ +S + T ERI V G + S+ + +I + I
Sbjct: 45 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKVSDVILEKI 104
Query: 61 EEFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-- 116
E N G + +++L+VP + G +IGK G++IK IRE +GA++ V
Sbjct: 105 REKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPK 164
Query: 117 --SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG--ATIP 159
S S ER + I D V Q L V + P+ ATIP
Sbjct: 165 AGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAADPQHAMATIP 211
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 505
VG++IGK GET++ L+ ESG ++ +S + T ERI V G + S+ + +I + I
Sbjct: 45 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKVSDVILEKI 104
Query: 506 EEFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-- 561
E N G + +++L+VP + G +IGK G++IK IRE +GA++ V
Sbjct: 105 REKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPK 164
Query: 562 --SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG--ATIP 604
S S ER + I D V Q L V + P+ ATIP
Sbjct: 165 AGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAADPQHAMATIP 211
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRTITMTGTPDAIA 322
++ VPN G VIGK G +I EIR+ +GA I++ S+E + S +R IT+ D +
Sbjct: 129 KLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVL 188
Query: 323 L 323
+
Sbjct: 189 M 189
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRTITMTGTPDAIA 767
++ VPN G VIGK G +I EIR+ +GA I++ S+E + S +R IT+ D +
Sbjct: 129 KLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVL 188
Query: 768 L 768
+
Sbjct: 189 M 189
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 23/139 (16%)
Query: 245 RNNRDGPSQK----TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 300
R+ R GP+ K ++ + N + ++ +P+ +GA+IGKGG + ++ SG +++SK+
Sbjct: 13 RDERGGPATKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKN 72
Query: 301 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 360
E +N+R + G IA + ++ +E +R + DNN PS
Sbjct: 73 QEVYPGTNERICLVKGK---IASVLKVSDVILEKIREKV---------------DNNTPS 114
Query: 361 S-APLAGLNASNPLAAALP 378
G+ N + +P
Sbjct: 115 DIFDHKGMERKNEMKLVVP 133
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 23/139 (16%)
Query: 690 RNNRDGPSQK----TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKS 745
R+ R GP+ K ++ + N + ++ +P+ +GA+IGKGG + ++ SG +++SK+
Sbjct: 13 RDERGGPATKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKN 72
Query: 746 SEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPS 805
E +N+R + G IA + ++ +E +R + DNN PS
Sbjct: 73 QEVYPGTNERICLVKGK---IASVLKVSDVILEKIREKV---------------DNNTPS 114
Query: 806 S-APLAGLNASNPLAAALP 823
G+ N + +P
Sbjct: 115 DIFDHKGMERKNEMKLVVP 133
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKG 132
E ++Q+++++P++ G++IGKGG ++ ++ SG + ++ ++ P + ER +KG
Sbjct: 30 EDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKG 88
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKG 577
E ++Q+++++P++ G++IGKGG ++ ++ SG + ++ ++ P + ER +KG
Sbjct: 30 EDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKG 88
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIGK GE + ++++ESG KI I+ S +R T+ GS +++ +A L+++ IE
Sbjct: 92 KMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRPCTLTGSPENIEQAKRLLSEIIE 151
Query: 62 EFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASD 118
+ H + GNG Q ++++PA++ G +IGKGG IK ++E +G + + D
Sbjct: 152 QCRYGPGFHNDMDGNGSIQ----QMLIPANKVGLVIGKGGETIKQLQERTGVQMMMIQDD 207
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
+P ++ + I G P V QA + ++ D
Sbjct: 208 PMPTGADKPLRITGDPLKVQQARELVVKLIRDK 240
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIGK GE + ++++ESG KI I+ S +R T+ GS +++ +A L+++ IE
Sbjct: 92 KMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRPCTLTGSPENIEQAKRLLSEIIE 151
Query: 507 EFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASD 563
+ H + GNG Q ++++PA++ G +IGKGG IK ++E +G + + D
Sbjct: 152 QCRYGPGFHNDMDGNGSIQ----QMLIPANKVGLVIGKGGETIKQLQERTGVQMMMIQDD 207
Query: 564 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 596
+P ++ + I G P V QA + ++ D
Sbjct: 208 PMPTGADKPLRITGDPLKVQQARELVVKLIRDK 240
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG IIG++GE +KK++ ++G +I D +P+R+ V+G + A LI + ++
Sbjct: 270 VGIIIGRNGEMIKKIQNDAGVRIQFKQDDGISPDRVAQVMGQPEHCHHAVHLINELVQTA 329
Query: 64 HKNQNKHLGGN---------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
+ + G G L ++ VPA +CG +IGKGG IK I+E S A V
Sbjct: 330 QERDGYGVMGRRGRVDCNTGGAGGLQEVTYAVPADKCGLVIGKGGETIKNIKEQSRAHVE 389
Query: 115 VASDMLPNSTE--REVNIKGVPDAVTQA 140
+ + P++ R +I+G P + +A
Sbjct: 390 LQRNPPPSTDPNVRIFSIRGTPQQLEKA 417
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG IIG++GE +KK++ ++G +I D +P+R+ V+G + A LI + ++
Sbjct: 270 VGIIIGRNGEMIKKIQNDAGVRIQFKQDDGISPDRVAQVMGQPEHCHHAVHLINELVQTA 329
Query: 509 HKNQNKHLGGN---------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+ + G G L ++ VPA +CG +IGKGG IK I+E S A V
Sbjct: 330 QERDGYGVMGRRGRVDCNTGGAGGLQEVTYAVPADKCGLVIGKGGETIKNIKEQSRAHVE 389
Query: 560 VASDMLPNSTE--REVNIKGVPDAVTQA 585
+ + P++ R +I+G P + +A
Sbjct: 390 LQRNPPPSTDPNVRIFSIRGTPQQLEKA 417
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIY-ISDSSTP---ERIVTVIGSMDSLFRAFSLITKNI 60
+VG +IGK GET+K+L+E +G ++ I D P ++ + + G + +A L+ K I
Sbjct: 178 KVGLVIGKGGETIKQLQERTGVQMMMIQDDPMPTGADKPLRITGDPLKVQQARELVVKLI 237
Query: 61 EEFHKNQNKHLGGNGE--SQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
+ K+Q G E S++ L ++VP G IIG+ G IK I+ +G +
Sbjct: 238 RD--KDQGDFRTGRAEFGSKMGGTSLDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFK 295
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIYQI 144
D S +R + G P+ A++ I
Sbjct: 296 QD-DGISPDRVAQVMGQPEHCHHAVHLI 322
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 450 EVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNI 505
+VG +IGK GET+K+L+E +G + + I D P ++ + + G + +A L+ K I
Sbjct: 178 KVGLVIGKGGETIKQLQERTGVQMMMIQDDPMPTGADKPLRITGDPLKVQQARELVVKLI 237
Query: 506 EEFHKNQNKHLGGNGE--SQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+ K+Q G E S++ L ++VP G IIG+ G IK I+ +G +
Sbjct: 238 RD--KDQGDFRTGRAEFGSKMGGTSLDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFK 295
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQI 589
D S +R + G P+ A++ I
Sbjct: 296 QD-DGISPDRVAQVMGQPEHCHHAVHLI 322
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T++ VP++++G +IGKGG +I I++ SG I+I+ S DR T+TG+P+ I
Sbjct: 84 TEDFKVPDKMVGFIIGKGGEQISRIQQESGCKIQIASDS---GGMLDRPCTLTGSPENIE 140
Query: 323 LAQYLINMSVELLR 336
A+ L++ +E R
Sbjct: 141 QAKRLLSEIIEQCR 154
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T++ VP++++G +IGKGG +I I++ SG I+I+ S DR T+TG+P+ I
Sbjct: 84 TEDFKVPDKMVGFIIGKGGEQISRIQQESGCKIQIASDS---GGMLDRPCTLTGSPENIE 140
Query: 768 LAQYLINMSVELLR 781
A+ L++ +E R
Sbjct: 141 QAKRLLSEIIEQCR 154
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
VP + G VIGKGG I I++ S A + + ++ D N R ++ GTP + A+ L
Sbjct: 361 VPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPSTDPNVRIFSIRGTPQQLEKARQL 420
Query: 328 INMSV 332
I+ +
Sbjct: 421 IDERI 425
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 772
VP + G VIGKGG I I++ S A + + ++ D N R ++ GTP + A+ L
Sbjct: 361 VPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPSTDPNVRIFSIRGTPQQLEKARQL 420
Query: 773 INMSV 777
I+ +
Sbjct: 421 IDERI 425
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASD---MLPNSTEREVNIKGVPDAVTQA 140
VP G IIGKGG QI I++ SG + +ASD ML +R + G P+ + QA
Sbjct: 89 VPDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGML----DRPCTLTGSPENIEQA 142
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASD---MLPNSTEREVNIKGVPDAVTQA 585
VP G IIGKGG QI I++ SG + +ASD ML +R + G P+ + QA
Sbjct: 89 VPDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGML----DRPCTLTGSPENIEQA 142
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 152/365 (41%), Gaps = 65/365 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R ++ ++VG+IIG+ GE +KK+ E+S ++I I D ER V +
Sbjct: 116 FRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKDEPDEPISP 175
Query: 490 SMDSLFRAFSLITKNIE-EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
+MD L R IT + EF + Q G S + RL+VPASQ GS+IGK G+ IK
Sbjct: 176 AMDGLLRIHKRITDGSDGEFGQPQR------GASNVGPTRLLVPASQAGSLIGKQGATIK 229
Query: 549 TIRETSGASVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQIC----LIMVDSPPKGAT 602
+I+++S + V + ++ P + +R V I+G P V +A+ I +VD +
Sbjct: 230 SIQDSSKSVVRIVENVPPVALNDDRVVEIQGEPLGVHKAVELIANHLRKFLVDH----SV 285
Query: 603 IPYRPLPQNAGGPGLIGNQFGMQN----SLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG 658
+P L Q M + M AP P G G GG
Sbjct: 286 LP------------LFEQQMKMHSVQREQPMTAPQHW-TPTQPWLPPPNLPPVGPGYGGN 332
Query: 659 LNAAALAALASSQLKTNHMPRN-----QNQNQNQHNRNNRDGPSQKTNQQQNQI-----T 708
+ + N+ PR + Q + R+ P T+ Q +
Sbjct: 333 ------PQFMPPRPQDNYYPRPDVPPMEKQPHYGISAYGREAPPSGTSGNQPPLHVASQV 386
Query: 709 KEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIAL 768
M +P AVIG G I IR+ SGA + I +S + T+ + G+ +
Sbjct: 387 HNMQIPLSYADAVIGAAGASISYIRRQSGAAVTIQESRGA---PGEMTVEIIGSASQVQT 443
Query: 769 AQYLI 773
AQ LI
Sbjct: 444 AQQLI 448
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 149/359 (41%), Gaps = 65/359 (18%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLF 50
++VG+IIG+ GE +KK+ E+S ++I I D ER V + +MD L
Sbjct: 122 AQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKDEPDEPISPAMDGLL 181
Query: 51 RAFSLITKNIE-EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
R IT + EF + Q G S + RL+VPASQ GS+IGK G+ IK+I+++S
Sbjct: 182 RIHKRITDGSDGEFGQPQR------GASNVGPTRLLVPASQAGSLIGKQGATIKSIQDSS 235
Query: 110 GASVYVASDMLPNS--TEREVNIKGVPDAVTQAIYQIC----LIMVDSPPKGATIPYRPL 163
+ V + ++ P + +R V I+G P V +A+ I +VD + +P
Sbjct: 236 KSVVRIVENVPPVALNDDRVVEIQGEPLGVHKAVELIANHLRKFLVDH----SVLP---- 287
Query: 164 PQNAGGPGLIGNQFGMQN----SLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAAL 219
L Q M + M AP P G G GG
Sbjct: 288 --------LFEQQMKMHSVQREQPMTAPQHW-TPTQPWLPPPNLPPVGPGYGGN------ 332
Query: 220 AALASSQLKTNHMPRN-----QNQNQNQHNRNNRDGPSQKTNQQQNQI-----TKEMTVP 269
+ + N+ PR + Q + R+ P T+ Q + M +P
Sbjct: 333 PQFMPPRPQDNYYPRPDVPPMEKQPHYGISAYGREAPPSGTSGNQPPLHVASQVHNMQIP 392
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
AVIG G I IR+ SGA + I +S + T+ + G+ + AQ LI
Sbjct: 393 LSYADAVIGAAGASISYIRRQSGAAVTIQESRGA---PGEMTVEIIGSASQVQTAQQLI 448
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 30/171 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS--------- 490
R++ G+++GSIIG+ GE VK+LR E+ +KI I ++ ER+VTV S
Sbjct: 49 FRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDD 108
Query: 491 --------MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
D+LF+ + E+ H +Q + G + +L+VP+ Q G ++GK
Sbjct: 109 GDKLVSPAEDALFKIHDRVVA--EDLHSDQEEEGGPQ-----VNAKLLVPSDQIGCVLGK 161
Query: 543 GGSQIKTIRETSGASVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQI 589
GG ++ +R +GA + + D +P R V I G V +A++QI
Sbjct: 162 GGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQI 212
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 30/165 (18%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMD------------- 47
G+++GSIIG+ GE VK+LR E+ +KI I ++ ER+VTV S D
Sbjct: 55 GRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKLVS 114
Query: 48 ----SLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 103
+LF+ + E+ H +Q + G + +L+VP+ Q G ++GKGG ++
Sbjct: 115 PAEDALFKIHDRVVA--EDLHSDQEEEGGPQ-----VNAKLLVPSDQIGCVLGKGGQIVQ 167
Query: 104 TIRETSGASVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQI 144
+R +GA + + D +P R V I G V +A++QI
Sbjct: 168 NLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQI 212
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 141/337 (41%), Gaps = 45/337 (13%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS--NDRTITMTGTP 318
Q+ ++ VP++ IG V+GKGG + +R +GA IRI K + +D + ++G
Sbjct: 143 QVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISG-- 200
Query: 319 DAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALP 378
DA + + L ++ + L+ ++ + + PS L G A P+ P
Sbjct: 201 DAAVVKKALHQIA-----SRLHHNPSRTQHLLGSAVPSVYPSGGSLMGPTAGPPIVGMAP 255
Query: 379 QLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGV 438
L P GG S G P+ + ++
Sbjct: 256 -----LVGP------------------YGGYKSDTGDWPPRSMYSAPR-----DEISSSK 287
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAF 498
+ +R + +G +IGK G + ++R++SG+ I + S+ + + I + + F
Sbjct: 288 EFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKGDDCLITISTKEFFEETF 347
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQL--RLIVPASQCGSIIGKGGSQIKTIRETSGA 556
S + ++ +S +I RL+V +S+ G +IGKGGS I +R + +
Sbjct: 348 SPTVEAAVLLQPRCSEK--SERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKS 405
Query: 557 SVYVAS-DMLP---NSTEREVNIKGVPDAVTQAIYQI 589
++ + S + LP + + V I G D A+ Q+
Sbjct: 406 NIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQV 442
>gi|410074879|ref|XP_003955022.1| hypothetical protein KAFR_0A04520 [Kazachstania africana CBS 2517]
gi|372461604|emb|CCF55887.1| hypothetical protein KAFR_0A04520 [Kazachstania africana CBS 2517]
Length = 469
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 165/385 (42%), Gaps = 64/385 (16%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
+R + KE I+G GET+ K+++++ +I +S + PER++ V GS D++ +AF
Sbjct: 98 LRMLCLVKEASLIVGPKGETISKMKKDTNCRINVSKNIKGVPERVIYVKGSCDNVAKAFG 157
Query: 500 LITKNIEE---FH----KNQNKH----LGGNG-----ESQLIQ-----------LRLIVP 532
L+ + + + F+ +NQ + L N E +L + L L++P
Sbjct: 158 LLVRILSQKKTFYNGSSQNQERESQTDLDENNGINANEIKLTEKKSPILYYPATLHLLIP 217
Query: 533 ASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLI 592
G +IGK GS++K I E S A + + L S +R + I GVPDA+ A + I
Sbjct: 218 HHLMGYVIGKHGSRLKEIEELSSAKLIASPHQLLPSNDRILRITGVPDAIHIATFYIAQT 277
Query: 593 MV---DSPPKGATIPYRPLP-----------QNAGGPGLIGNQFGMQNSLMGAPDMGNNP 638
+ D I Y+P P Q A P L N + N +P
Sbjct: 278 FMGFKDVLRTNKAIFYQPGPVYTVLGTNNYSQVAVLP-LRQNNYHYMNRYNNNYRHRRSP 336
Query: 639 LAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNR----NNRD 694
A L A+ + + + S++L+ + P + + + + R
Sbjct: 337 KASLMAM-------------VPSPTIPQYTSNELQVTYTPESVANATSFVPKFTIPHVRI 383
Query: 695 GPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSND 754
+ +Q + +E+ + + +G +IGK G I I++ +G I I E S +
Sbjct: 384 VENTMASQPMALVEQEIYINSNYVGNIIGKEGKHITSIKETTGCSIFIDSPV---EGSKE 440
Query: 755 RTITMTGTPDAIALAQYLINMSVEL 779
R IT+ G+ A +I+ +E+
Sbjct: 441 RKITIKGSAMGTQAAIMIISNKIEV 465
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 162/378 (42%), Gaps = 64/378 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
KE I+G GET+ K+++++ +I +S + PER++ V GS D++ +AF L+ + +
Sbjct: 105 KEASLIVGPKGETISKMKKDTNCRINVSKNIKGVPERVIYVKGSCDNVAKAFGLLVRILS 164
Query: 62 E---FH----KNQNKH----LGGNG-----ESQLIQ-----------LRLIVPASQCGSI 94
+ F+ +NQ + L N E +L + L L++P G +
Sbjct: 165 QKKTFYNGSSQNQERESQTDLDENNGINANEIKLTEKKSPILYYPATLHLLIPHHLMGYV 224
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV---DS 151
IGK GS++K I E S A + + L S +R + I GVPDA+ A + I + D
Sbjct: 225 IGKHGSRLKEIEELSSAKLIASPHQLLPSNDRILRITGVPDAIHIATFYIAQTFMGFKDV 284
Query: 152 PPKGATIPYRPLP-----------QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAAL 200
I Y+P P Q A P L N + N +P A L A+
Sbjct: 285 LRTNKAIFYQPGPVYTVLGTNNYSQVAVLP-LRQNNYHYMNRYNNNYRHRRSPKASLMAM 343
Query: 201 GLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNR----NNRDGPSQKTN 256
+ + + S++L+ + P + + + + R + +
Sbjct: 344 -------------VPSPTIPQYTSNELQVTYTPESVANATSFVPKFTIPHVRIVENTMAS 390
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q + +E+ + + +G +IGK G I I++ +G I I E S +R IT+ G
Sbjct: 391 QPMALVEQEIYINSNYVGNIIGKEGKHITSIKETTGCSIFIDSPV---EGSKERKITIKG 447
Query: 317 TPDAIALAQYLINMSVEL 334
+ A +I+ +E+
Sbjct: 448 SAMGTQAAIMIISNKIEV 465
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 113/279 (40%), Gaps = 60/279 (21%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T + +P+ L+G VIGK G+++ EI ++S A ++ S + SNDR + +TG PDAI
Sbjct: 211 TLHLLIPHHLMGYVIGKHGSRLKEIEELSSA--KLIASPHQLLPSNDRILRITGVPDAIH 268
Query: 323 LAQYLINMSV----ELLRAN------------------------LNGEGGGESNMDDFSS 354
+A + I + ++LR N L M+ + +
Sbjct: 269 IATFYIAQTFMGFKDVLRTNKAIFYQPGPVYTVLGTNNYSQVAVLPLRQNNYHYMNRY-N 327
Query: 355 DNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGG 414
+N +P A L A P + +PQ S+ L +
Sbjct: 328 NNYRHRRSPKASLMAMVP-SPTIPQYT---------------------SNELQVTYTPES 365
Query: 415 SGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQ-----GKEVGSIIGKSGETVKKLREES 469
N+ F P+ ++ T + M + Q VG+IIGK G+ + ++E +
Sbjct: 366 VANATSFVPKFTIPHVRIVENTMASQPMALVEQEIYINSNYVGNIIGKEGKHITSIKETT 425
Query: 470 GSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 506
G I+I + ER +T+ GS A +I+ IE
Sbjct: 426 GCSIFIDSPVEGSKERKITIKGSAMGTQAAIMIISNKIE 464
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T + +P+ L+G VIGK G+++ EI ++S A ++ S + SNDR + +TG PDAI
Sbjct: 211 TLHLLIPHHLMGYVIGKHGSRLKEIEELSSA--KLIASPHQLLPSNDRILRITGVPDAIH 268
Query: 768 LAQYLINMSV----ELLRAN 783
+A + I + ++LR N
Sbjct: 269 IATFYIAQTFMGFKDVLRTN 288
>gi|402594254|gb|EJW88180.1| hypothetical protein WUBG_00913 [Wuchereria bancrofti]
Length = 407
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 60
VG++IGK GET++ L+ ESG ++ +S + T ERI V G + S+ + +I + I
Sbjct: 13 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKVSDVILEKI 72
Query: 61 EEFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-- 116
E N G + +++L+VP + G +IGK G++IK IRE +GA++ V
Sbjct: 73 REKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPK 132
Query: 117 --SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG--ATIP 159
S S ER + I D V Q L V + P+ ATIP
Sbjct: 133 AGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAADPQHAMATIP 179
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 505
VG++IGK GET++ L+ ESG ++ +S + T ERI V G + S+ + +I + I
Sbjct: 13 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKVSDVILEKI 72
Query: 506 EEFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA-- 561
E N G + +++L+VP + G +IGK G++IK IRE +GA++ V
Sbjct: 73 REKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPK 132
Query: 562 --SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG--ATIP 604
S S ER + I D V Q L V + P+ ATIP
Sbjct: 133 AGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAADPQHAMATIP 179
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRTITMTGTPDAIA 322
++ VPN G VIGK G +I EIR+ +GA I++ S+E + S +R IT+ D +
Sbjct: 97 KLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVL 156
Query: 323 L 323
+
Sbjct: 157 M 157
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI--SKSSEEEEDSNDRTITMTGTPDAIA 767
++ VPN G VIGK G +I EIR+ +GA I++ S+E + S +R IT+ D +
Sbjct: 97 KLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVL 156
Query: 768 L 768
+
Sbjct: 157 M 157
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 63/340 (18%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST---PERIVTVIGSMDSLFRAF 498
+R ++Q + VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCTNA- 247
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
K I E + + L GE I LR++ + G IIGKGG+ IK I + + +
Sbjct: 248 ---CKKIMEVTQQEAYGL-SKGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKI 300
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V+S D+ + ER + +KG D +++A I + S PQ+ PG
Sbjct: 301 TVSSINDINNFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQA---MAPQSLMFPG 357
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG-GMGGGLNAAALAALASSQLKTN 675
L +P+A ++ G+G +S G G+ G A +S
Sbjct: 358 L-------------------HPMAMMSTAGMGYSSRGPGLYG--TGPAPYPYQTSLPTQQ 396
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
+P Q T + +PN +GA+IG G+ I I +
Sbjct: 397 GIPIGDTQE-----------------------TAFLYIPNTSVGAIIGSKGSHIRNIIRF 433
Query: 736 SGAMIRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 773
SGA ++I+ +++ E NDR +T+ G+P++ AQYLI
Sbjct: 434 SGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 473
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 151/336 (44%), Gaps = 63/336 (18%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSST---PERIVTVIGSMDSLFRAFSLIT 57
+Q + VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 193 VQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCTNA----C 248
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
K I E + + L GE I LR++ + G IIGKGG+ IK I + + + V+S
Sbjct: 249 KKIMEVTQQEAYGLS-KGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSS 304
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG D +++A I + S PQ+ PGL
Sbjct: 305 INDINNFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQA---MAPQSLMFPGL--- 358
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGG-GMGGGLNAAALAALASSQLKTNHMPR 234
+P+A ++ G+G +S G G+ G A +S +P
Sbjct: 359 ----------------HPMAMMSTAGMGYSSRGPGLYG--TGPAPYPYQTSLPTQQGIPI 400
Query: 235 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
Q T + +PN +GA+IG G+ I I + SGA
Sbjct: 401 GDTQE-----------------------TAFLYIPNTSVGAIIGSKGSHIRNIIRFSGAS 437
Query: 295 IRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 328
++I+ +++ E NDR +T+ G+P++ AQYLI
Sbjct: 438 VKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 473
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 57/307 (18%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+I+ + N LIG +IGKGGT I +I + + I +S ++ + +R IT+ G+ D
Sbjct: 266 EISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNLERIITVKGSIDN 325
Query: 321 IALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQL 380
++ A+ +I+ LR S +N+L + AP
Sbjct: 326 MSKAESMISSK---LRQ---------------SYENDLQAMAP----------------- 350
Query: 381 AQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVP--QGPNYANIQTTGV 438
Q L PG L+ + +S G G G G G +P QG + Q T
Sbjct: 351 -QSLMFPG-LHPMAMMSTAGMGYSSRGPGLYGTGPAPYPYQTSLPTQQGIPIGDTQETAF 408
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSM 491
+ VG+IIG G ++ + SG+ + I+ + P +R VT++GS
Sbjct: 409 -----LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSP 463
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+S ++A LI F K + + G E + + ++VP++Q G IIGKGG ++ ++
Sbjct: 464 ESQWKAQYLI------FEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQ 517
Query: 552 ETSGASV 558
+G+ +
Sbjct: 518 RVTGSII 524
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 13/115 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ + P +R VT++GS +S ++A LI
Sbjct: 416 VGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI-- 473
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
F K + + G E + + ++VP++Q G IIGKGG ++ ++ +G+ +
Sbjct: 474 ----FEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSII 524
>gi|308501016|ref|XP_003112693.1| hypothetical protein CRE_30686 [Caenorhabditis remanei]
gi|308267261|gb|EFP11214.1| hypothetical protein CRE_30686 [Caenorhabditis remanei]
Length = 597
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLIT----K 58
VG IIGK G+T+K+L E+G+KI D +T ER V+G+ + ++RA IT K
Sbjct: 242 VGIIIGKQGDTIKRLAMETGTKIQFKPDDDPTTEERTAIVMGTREQIYRATERITELVRK 301
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ ++ N S + VPA++CG +IGKGG IK I SGA ++ D
Sbjct: 302 STQQQGGGNMGGGVANDASTFF---MSVPAAKCGLVIGKGGETIKQINAESGAHCELSRD 358
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 161
+ E+ IKG + A + I + + D PP P+R
Sbjct: 359 ANASPDEKVFVIKGGRRQIEHAKHLIRIKVGDIPP---NTPFR 398
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLIT----K 503
VG IIGK G+T+K+L E+G+KI D +T ER V+G+ + ++RA IT K
Sbjct: 242 VGIIIGKQGDTIKRLAMETGTKIQFKPDDDPTTEERTAIVMGTREQIYRATERITELVRK 301
Query: 504 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 563
+ ++ N S + VPA++CG +IGKGG IK I SGA ++ D
Sbjct: 302 STQQQGGGNMGGGVANDASTFF---MSVPAAKCGLVIGKGGETIKQINAESGAHCELSRD 358
Query: 564 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 606
+ E+ IKG + A + I + + D PP P+R
Sbjct: 359 ANASPDEKVFVIKGGRRQIEHAKHLIRIKVGDIPP---NTPFR 398
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 6 VGSIIGKSGETVKKLREESGSKIY-------ISDSSTPERIVTVIGSMDSLFRAFSLITK 58
G IIGK+GET+++L+E+SG K+ ISD + P RI G + A L+
Sbjct: 146 CGLIIGKAGETIRQLQEKSGCKMILVQENQSISDQAKPLRIT---GDPQKIEIAKQLVAD 202
Query: 59 ------------NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 106
++ H+ G + +++ VP S G IIGK G IK +
Sbjct: 203 ILNSGGDGNGGSGLQMHHQGGGGGGGASARGEVV-----VPRSSVGIIIGKQGDTIKRLA 257
Query: 107 ETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS 151
+G + D P + ER + G + + +A +I ++ S
Sbjct: 258 METGTKIQFKPDDDPTTEERTAIVMGTREQIYRATERITELVRKS 302
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
M+VP G VIGKGG I +I SGA +S+ + D ++ + G I A+
Sbjct: 324 MSVPAAKCGLVIGKGGETIKQINAESGAHCELSRDANASPD--EKVFVIKGGRRQIEHAK 381
Query: 326 YLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQ 382
+LI + V + N +M N P+ A G NP AA +P Q
Sbjct: 382 HLIRIKVGDIPPNTPFRDDSAMSM---QPQFNAPAQAAYGGQQQWNPAAAQIPAATQ 435
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
M+VP G VIGKGG I +I SGA +S+ + D ++ + G I A+
Sbjct: 324 MSVPAAKCGLVIGKGGETIKQINAESGAHCELSRDANASPD--EKVFVIKGGRRQIEHAK 381
Query: 771 YLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQ 827
+LI + V + N +M N P+ A G NP AA +P Q
Sbjct: 382 HLIRIKVGDIPPNTPFRDDSAMSM---QPQFNAPAQAAYGGQQQWNPAAAQIPAATQ 435
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---- 479
VP G Y ++ + ++ ++ GSIIGK G+T+ +L++E+G+ I +S S
Sbjct: 167 VPDG--YPDVANEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 224
Query: 480 -TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLI 530
T ER+ V G+ ++L S I + + E + K N + Q +LI
Sbjct: 225 GTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI 284
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIY 587
VP S G IIGKGG+ +K + E SGA V ++ P N ER V + G P+ V +A+
Sbjct: 285 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVS 342
Query: 588 QICLIMVDSP 597
I + + P
Sbjct: 343 AIVQKVQEDP 352
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 193 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 252
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 253 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 312
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 313 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 352
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 558 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 617
Query: 325 QYLINMSV 332
QYLI+ V
Sbjct: 618 QYLISQRV 625
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 558 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 617
Query: 770 QYLINMSV 777
QYLI+ V
Sbjct: 618 QYLISQRV 625
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 183 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL-N 241
Query: 140 AIYQICLIMVDSPPKGATIP 159
A++ V P+ T P
Sbjct: 242 AVHSFIAEKVREIPQAMTKP 261
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
DG N++ K + +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 169 DGYPDVANEEGEYFLKVL-IPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 227
Query: 309 DRTITMTGTPDAIALAQYLINMSV 332
+R + GT +A+ I V
Sbjct: 228 ERVCLVQGTAEALNAVHSFIAEKV 251
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 694 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
DG N++ K + +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 169 DGYPDVANEEGEYFLKVL-IPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 227
Query: 754 DRTITMTGTPDAIALAQYLINMSV 777
+R + GT +A+ I V
Sbjct: 228 ERVCLVQGTAEALNAVHSFIAEKV 251
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 126
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 546 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 603
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G P A A Y I
Sbjct: 604 RVTITGSPAATQAAQYLI 621
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 571
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 546 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 603
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G P A A Y I
Sbjct: 604 RVTITGSPAATQAAQYLI 621
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 167/399 (41%), Gaps = 72/399 (18%)
Query: 231 HMPRNQNQNQNQHNRNNRDG-PSQKTNQ-QQNQITKEMTVPNELIGAVIGKGGTKIFEIR 288
H P N+ H + R G P + Q QN + M VP + +GA+IGK G I I
Sbjct: 165 HSPVMSNRRGYGHRGSQRQGSPGGASGQNHQNDVPLRMLVPTQFVGAIIGKEGATIRNIT 224
Query: 289 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI---------------NMSVE 333
K + + I I + +E ++++ IT+ +P+ + A +I + ++
Sbjct: 225 KQTQSKIDIHR--KENAGASEKPITIHASPEGCSTACKIIMEIMQKEAQDTKFTDEIPLK 282
Query: 334 LLRAN-----LNGEGGGESNMDDFSSDNNLPSS-APLAGLNASNPLAAALPQLAQILTKP 387
+L N L G+ G N+ D + + +PL L NP + +T
Sbjct: 283 ILAHNNFVGRLIGKEG--RNLKKIEQDTDTKITISPLQELTLYNP--------ERTITVK 332
Query: 388 GALNAL----------------TSLSALGGLSDLLGG-----------GSSGGGSGNSGG 420
G++ + LSA+ + LL G +SG S ++ G
Sbjct: 333 GSIETCGKAEEEIMKKIRESYESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLG 392
Query: 421 FGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST 480
NY + + VG+IIGK G+ +K+L +G+ I I+ T
Sbjct: 393 VPSAAAATNYLPYGQQAETETVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPET 452
Query: 481 P---ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
P ER+V + G ++ F+A I + K + ++ G E ++ ++ VP+ G
Sbjct: 453 PDAKERMVIITGPPEAQFKAQGRI------YGKLKEENFFGPKEEVKLEAQIKVPSYAAG 506
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+IGKGG + ++ + A V V D +P+ + EV +K
Sbjct: 507 RVIGKGGKTVNELQNLTSAEVVVPRDQIPDEND-EVIVK 544
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 52/185 (28%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ +++ +KI IS PER +TV GS+++ +A I K I
Sbjct: 290 VGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSIETCGKAEEEIMKKI 349
Query: 61 EEFHK------NQNKHL---------------------------------------GGNG 75
E ++ N HL G
Sbjct: 350 RESYESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAATNYLPYGQQA 409
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
E++ + L +PA G+IIGK G IK + +GAS+ +A P++ ER V I G P+
Sbjct: 410 ETETVHL--FIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITGPPE 467
Query: 136 AVTQA 140
A +A
Sbjct: 468 AQFKA 472
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L +G+ I I+ TP ER+V + G ++ F+A I
Sbjct: 423 VGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITGPPEAQFKAQGRI------ 476
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+ K + ++ G E ++ ++ VP+ G +IGKGG + ++ + A V V D +P+
Sbjct: 477 YGKLKEENFFGPKEEVKLEAQIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPRDQIPD 536
Query: 123 STEREVNIK 131
+ EV +K
Sbjct: 537 END-EVIVK 544
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 69/336 (20%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T++ + +++ SKI I ++ E+ +T+ S + A
Sbjct: 200 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASPEGCSTAC 259
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I + ++ K + I L+++ + G +IGK G +K I + + +
Sbjct: 260 KIIMEIMQ-------KEAQDTKFTDEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKI 312
Query: 559 YVA--SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
++ ++ + ER + +KG + +A +I + +S
Sbjct: 313 TISPLQELTLYNPERTITVKGSIETCGKAEEEIMKKIRES-------------------- 352
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
S + A ++ + L G L ALGL S G+ +A A+ T
Sbjct: 353 --------YESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAA----T 400
Query: 675 NHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
N++P QQ T + +P +GA+IGK G I ++ +
Sbjct: 401 NYLP---------------------YGQQAETETVHLFIPAMAVGAIIGKMGQHIKQLSR 439
Query: 735 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+GA I+I+ E D+ +R + +TG P+A AQ
Sbjct: 440 FAGASIKIAPP--ETPDAKERMVIITGPPEAQFKAQ 473
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 69/327 (21%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T++ + +++ SKI I ++ E+ +T+ S + A +I + ++
Sbjct: 209 VGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASPEGCSTACKIIMEIMQ- 267
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDML 120
K + I L+++ + G +IGK G +K I + + + ++ ++
Sbjct: 268 ------KEAQDTKFTDEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELT 321
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
+ ER + +KG + +A +I + +S
Sbjct: 322 LYNPERTITVKGSIETCGKAEEEIMKKIRES----------------------------Y 353
Query: 181 NSLMGAPDMGNNPLAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQ 238
S + A ++ + L G L ALGL S G+ +A A+ TN++P
Sbjct: 354 ESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAA----TNYLP----- 404
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
QQ T + +P +GA+IGK G I ++ + +GA I+I+
Sbjct: 405 ----------------YGQQAETETVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIA 448
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQ 325
E D+ +R + +TG P+A AQ
Sbjct: 449 PP--ETPDAKERMVIITGPPEAQFKAQ 473
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 174/404 (43%), Gaps = 77/404 (19%)
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
++ Q ++ G S + Q+Q M VP + +GA+IGK G I I K + + + I
Sbjct: 175 SREQDSQPGTSGSSLGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIH 234
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLI---------------NMSVELLRAN----- 338
+ +E + ++ IT+ TP+ + A ++I ++ +++L N
Sbjct: 235 R--KENAGAAEKPITIHSTPEGCSTACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGR 292
Query: 339 LNGEGGGESNMDDFSSDNNLPSS-APLAGLNASNP---------LAAALPQLAQILTK-- 386
L G+ G N+ D + + L L NP + A +I+ K
Sbjct: 293 LIGKEG--RNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLR 350
Query: 387 ------PGALNALT------SLSALG----GLSDL--------------LGGGSSGGGSG 416
A+N + SLSALG GLS L G G S
Sbjct: 351 EAYENDVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSS 410
Query: 417 NSGGFGGVPQGPNYANIQTTGVQRRMRHI-MQGKEVGSIIGKSGETVKKLREESGSKIYI 475
GG GVP ++ T ++ + ++ + + VG+IIGK G+ +K+L +G+ I I
Sbjct: 411 QLGGLYGVPPASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI 470
Query: 476 SDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVP 532
+ + +P+ R+V + G ++ F+A I F K + ++ E ++ + VP
Sbjct: 471 APAESPDVTQRMVIITGPPEAQFKAQGRI------FGKLKEENFFTAKEEVKLETHIKVP 524
Query: 533 ASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+S G +IGKGG + ++ + A V V D P+ + EV +K
Sbjct: 525 SSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDEND-EVFVK 567
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 149/347 (42%), Gaps = 68/347 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + + A
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSTAC 259
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I ++ K ++ I L+++ S G +IGK G +K I E + +
Sbjct: 260 HMIMDIMQ-------KEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKI 312
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
++S D+ + ER + +KG +A +A +I + ++ + Q+ PG
Sbjct: 313 TISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQ---QSNLIPG 369
Query: 617 LIGNQFGMQNS-------------LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
L + G+ ++ + P G NP G ++ LGG G G++
Sbjct: 370 LSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSS-QLGGLYGVPPASGIS--- 425
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 723
+QH + P Q+ + +P + +GA+IG
Sbjct: 426 ----------------------HQHTQ----APEQEVVY--------LFIPTQAVGAIIG 451
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
K G I ++ + +GA I+I+ + E D R + +TG P+A AQ
Sbjct: 452 KKGQHIKQLARFAGASIKIAPA--ESPDVTQRMVIITGPPEAQFKAQ 496
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L +G+ I I+ + +P+ R+V + G ++ F+A I
Sbjct: 446 VGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEAQFKAQGRI------ 499
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + ++ E ++ + VP+S G +IGKGG + ++ + A V V D P+
Sbjct: 500 FGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 559
Query: 123 STEREVNIK 131
+ EV +K
Sbjct: 560 END-EVFVK 567
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 144/338 (42%), Gaps = 68/338 (20%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + + A +I ++
Sbjct: 209 VGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSTACHMIMDIMQ- 267
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
K ++ I L+++ S G +IGK G +K I E + + ++S D+
Sbjct: 268 ------KEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDLT 321
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
+ ER + +KG +A +A +I + ++ + Q+ PGL + G+
Sbjct: 322 IYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQ---QSNLIPGLSLSALGIF 378
Query: 181 NS-------------LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
++ + P G NP G ++ LGG G G++
Sbjct: 379 STGLSVLPPAAGPRGIPPVPPTGYNPFLGHSS-QLGGLYGVPPASGIS------------ 425
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+QH + P Q+ + +P + +GA+IGK G I ++
Sbjct: 426 -------------HQHTQ----APEQEVVY--------LFIPTQAVGAIIGKKGQHIKQL 460
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +GA I+I+ + E D R + +TG P+A AQ
Sbjct: 461 ARFAGASIKIAPA--ESPDVTQRMVIITGPPEAQFKAQ 496
>gi|145341361|ref|XP_001415781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576004|gb|ABO94073.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 340
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 21/175 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GS+IGK G T+ + + +G++I +S + T +R+V V G + ++ +
Sbjct: 47 LKFLISPSAAGSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVVIVSGDLSAILQ 106
Query: 497 AFSLI-TKNIEEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRET 553
LI TK + + G G ++ Q+ L+VP S CG IIGKGGS+I++ E
Sbjct: 107 VLHLIITKLVAD----------GEGIDRMGQPQVALVVPNSSCGCIIGKGGSKIRSFVED 156
Query: 554 SGASVYVASD--MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 606
S A + +++ MLP +R + I G D V +A+ + + + P AT+ +R
Sbjct: 157 SQADIKLSNQDRMLPGCNDRTLTITGTIDCVLRAVALVATTLCEDPAY-ATLVHR 210
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 21/165 (12%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLI-TKNI 60
GS+IGK G T+ + + +G++I +S + T +R+V V G + ++ + LI TK +
Sbjct: 57 GSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVVIVSGDLSAILQVLHLIITKLV 116
Query: 61 EEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ G G ++ Q+ L+VP S CG IIGKGGS+I++ E S A + +++
Sbjct: 117 AD----------GEGIDRMGQPQVALVVPNSSCGCIIGKGGSKIRSFVEDSQADIKLSNQ 166
Query: 119 --MLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 161
MLP +R + I G D V +A+ + + + P AT+ +R
Sbjct: 167 DRMLPGCNDRTLTITGTIDCVLRAVALVATTLCEDPAY-ATLVHR 210
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+T+P+ LIGAV+G+GG I E++ SG I++S + E + +R + ++G+ + + +A
Sbjct: 258 VTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSDRDDFFEGTRNRKVVISGSAEGVQMAN 317
Query: 326 YLINMSVELLRANLNGEG 343
YL+ + + A ++ G
Sbjct: 318 YLLTQKLSAITAQMSFSG 335
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+T+P+ LIGAV+G+GG I E++ SG I++S + E + +R + ++G+ + + +A
Sbjct: 258 VTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSDRDDFFEGTRNRKVVISGSAEGVQMAN 317
Query: 771 YLINMSVELLRANLNGEG 788
YL+ + + A ++ G
Sbjct: 318 YLLTQKLSAITAQMSFSG 335
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ VPN G +IGKGG+KI + S A I++S NDRT+T+TGT D + A
Sbjct: 132 LVVPNSSCGCIIGKGGSKIRSFVEDSQADIKLSNQDRMLPGCNDRTLTITGTIDCVLRAV 191
Query: 326 YLI 328
L+
Sbjct: 192 ALV 194
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ VPN G +IGKGG+KI + S A I++S NDRT+T+TGT D + A
Sbjct: 132 LVVPNSSCGCIIGKGGSKIRSFVEDSQADIKLSNQDRMLPGCNDRTLTITGTIDCVLRAV 191
Query: 771 YLI 773
L+
Sbjct: 192 ALV 194
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 274 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
G+VIGKGG I E + ++GA I++S++ E +NDR + ++G AI +LI
Sbjct: 57 GSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVVIVSGDLSAILQVLHLI 111
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
G+VIGKGG I E + ++GA I++S++ E +NDR + ++G AI +LI
Sbjct: 57 GSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVVIVSGDLSAILQVLHLI 111
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 150/339 (44%), Gaps = 61/339 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAF 498
+R ++Q VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 190 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSLEKAITIYGNPENCTNAC 249
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
I + + + N NK GE I L+++ + G IIGKGG+ IK I + + +
Sbjct: 250 KKILEVMHQEASNTNK-----GE---ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKI 301
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V+S D+ + ER + +KG + +++A I + S PQ+ PG
Sbjct: 302 TVSSINDINSFNLERIITVKGSIENMSKAEAMISNKLRQSYENDLQA---MAPQSMMFPG 358
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
L +P+A ++ +G NS G G A
Sbjct: 359 L-------------------HPMAMMSTASMGYNSRGPALYGTGPAPY------------ 387
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
P N P Q Q T + +PN +GA+IG G+ I I + S
Sbjct: 388 -PYQSNLT-----------PQQGVLTSDAQETTFLYIPNNSVGAIIGTKGSHIRNIIRFS 435
Query: 737 GAMIRIS--KSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
GA ++I+ +S + E +R +T+ G+P++ AQYLI
Sbjct: 436 GASVKIAPLESDKPAEQQTERKVTIVGSPESQWKAQYLI 474
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 147/335 (43%), Gaps = 61/335 (18%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAFSLIT 57
+Q VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A I
Sbjct: 194 VQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSLEKAITIYGNPENCTNACKKIL 253
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
+ + + N NK GE I L+++ + G IIGKGG+ IK I + + + V+S
Sbjct: 254 EVMHQEASNTNK-----GE---ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSS 305
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG + +++A I + S PQ+ PGL
Sbjct: 306 INDINSFNLERIITVKGSIENMSKAEAMISNKLRQSYENDLQA---MAPQSMMFPGL--- 359
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+P+A ++ +G NS G G A P
Sbjct: 360 ----------------HPMAMMSTASMGYNSRGPALYGTGPAPY-------------PYQ 390
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
N P Q Q T + +PN +GA+IG G+ I I + SGA +
Sbjct: 391 SNLT-----------PQQGVLTSDAQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASV 439
Query: 296 RIS--KSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+I+ +S + E +R +T+ G+P++ AQYLI
Sbjct: 440 KIAPLESDKPAEQQTERKVTIVGSPESQWKAQYLI 474
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 170/415 (40%), Gaps = 84/415 (20%)
Query: 253 QKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTI 312
+ +N + +IT ++ N LIG +IGKGG I I + + I +S ++ + +R I
Sbjct: 259 EASNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLERII 318
Query: 313 TMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 372
T+ G+ + ++ A+ +I SN S +N+L + AP
Sbjct: 319 TVKGSIENMSKAEAMI------------------SNKLRQSYENDLQAMAP--------- 351
Query: 373 LAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYAN 432
Q + PG L + +S G +S G + G P N
Sbjct: 352 ---------QSMMFPG-------LHPMAMMSTASMGYNSRGPALYGTGPAPYPYQSNLTP 395
Query: 433 IQ---TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----E 482
Q T+ Q + VG+IIG G ++ + SG+ + I+ +S P E
Sbjct: 396 QQGVLTSDAQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLESDKPAEQQTE 455
Query: 483 RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
R VT++GS +S ++A LI F K + + E + + ++VP++Q G IIGK
Sbjct: 456 RKVTIVGSPESQWKAQYLI------FEKMREEGFVSGTEDVRLTVEILVPSAQVGRIIGK 509
Query: 543 GGSQIKTIRETSGASVYVASDM-LPNSTEREVNIKGV-PDAVTQAIYQICLIMVDSPPKG 600
GG ++ ++ +G+ + ++ P + + E + + P Q+ + MV P
Sbjct: 510 GGQNVRELQRVTGSVIKLSEQQATPPTADEETTVHIIGPFFSVQSAQRRIRAMVVQP--- 566
Query: 601 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 655
AGGPG S+ G P M L G G G + GG+
Sbjct: 567 ----------GAGGPG----------SVTGIPGMPGQGLPGGPRSGRGSSQEGGV 601
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ +S P ER VT++GS +S ++A LI
Sbjct: 417 VGAIIGTKGSHIRNIIRFSGASVKIAPLESDKPAEQQTERKVTIVGSPESQWKAQYLI-- 474
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
F K + + E + + ++VP++Q G IIGKGG ++ ++ +G+ + ++
Sbjct: 475 ----FEKMREEGFVSGTEDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQ 530
Query: 119 M-LPNSTEREVNIKGV-PDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 176
P + + E + + P Q+ + MV P AGGPG
Sbjct: 531 QATPPTADEETTVHIIGPFFSVQSAQRRIRAMVVQP-------------GAGGPG----- 572
Query: 177 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGM 210
S+ G P M L G G G + GG+
Sbjct: 573 -----SVTGIPGMPGQGLPGGPRSGRGSSQEGGV 601
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 71 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
L G G LR++V + G+IIG+ GS I+ I + + A V V S E+ + I
Sbjct: 179 LPGAGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSLEKAITI 238
Query: 131 KGVPDAVTQAIYQICLIM 148
G P+ T A +I +M
Sbjct: 239 YGNPENCTNACKKILEVM 256
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 516 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 575
L G G LR++V + G+IIG+ GS I+ I + + A V V S E+ + I
Sbjct: 179 LPGAGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSLEKAITI 238
Query: 576 KGVPDAVTQAIYQICLIM 593
G P+ T A +I +M
Sbjct: 239 YGNPENCTNACKKILEVM 256
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 119 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 178
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
A S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 179 AHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 238
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 239 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 288
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L A S I + +
Sbjct: 129 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAAHSFIAEKVR 188
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 189 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 248
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 249 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 288
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 494 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 553
Query: 325 QYLINMSV 332
QYLI+ V
Sbjct: 554 QYLISQRV 561
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 494 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 553
Query: 770 QYLINMSV 777
QYLI+ V
Sbjct: 554 QYLISQRV 561
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 314
T+ ++ + ++ +P+ G++IGKGG I +++K +GA I++SKS + + +R +
Sbjct: 110 THGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLV 169
Query: 315 TGTPDAIALAQYLINMSV 332
GT +A+ A I V
Sbjct: 170 QGTAEALNAAHSFIAEKV 187
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 700 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 759
T+ ++ + ++ +P+ G++IGKGG I +++K +GA I++SKS + + +R +
Sbjct: 110 THGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLV 169
Query: 760 TGTPDAIALAQYLINMSV 777
GT +A+ A I V
Sbjct: 170 QGTAEALNAAHSFIAEKV 187
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
+GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 111 HGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 170
Query: 132 GVPDAVTQA 140
G +A+ A
Sbjct: 171 GTAEALNAA 179
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
+GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 111 HGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 170
Query: 577 GVPDAVTQA 585
G +A+ A
Sbjct: 171 GTAEALNAA 179
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 424 VPQG---PNYANI---QTTGVQRRMRH---IMQGKEVGSIIGKSGETVKKLREESGSKIY 474
+PQ P NI QTT R + I+ G IIGK G TVK + E+SG+ +
Sbjct: 190 IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQ 249
Query: 475 ISDS----STPERIVTVIGSMDSLFRAFSLITKNIEE 507
+S + ER+VTV G + + +A S I + ++E
Sbjct: 250 LSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 286
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 126
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 482 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 539
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G P A A Y I
Sbjct: 540 RVTITGSPAATQAAQYLI 557
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 571
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 482 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 539
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G P A A Y I
Sbjct: 540 RVTITGSPAATQAAQYLI 557
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 174/404 (43%), Gaps = 77/404 (19%)
Query: 239 NQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRIS 298
++ Q ++ G S + Q+Q M VP + +GA+IGK G I I K + + + I
Sbjct: 175 SREQDSQPGTSGSSLGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIH 234
Query: 299 KSSEEEEDSNDRTITMTGTPDAIALAQYLI---------------NMSVELLRAN----- 338
+ +E + ++ IT+ TP+ + A ++I ++ +++L N
Sbjct: 235 R--KENAGAAEKPITIHSTPEGCSTACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGR 292
Query: 339 LNGEGGGESNMDDFSSDNNLPSS-APLAGLNASNP---------LAAALPQLAQILTK-- 386
L G+ G N+ D + + L L NP + A +I+ K
Sbjct: 293 LIGKEG--RNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLR 350
Query: 387 ------PGALNALT------SLSALG----GLSDL--------------LGGGSSGGGSG 416
A+N + SLSALG GLS L G G S
Sbjct: 351 EAYENDVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSS 410
Query: 417 NSGGFGGVPQGPNYANIQTTGVQRRMRHI-MQGKEVGSIIGKSGETVKKLREESGSKIYI 475
GG GVP ++ T ++ + ++ + + VG+IIGK G+ +K+L +G+ I I
Sbjct: 411 QLGGLYGVPPASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI 470
Query: 476 SDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVP 532
+ + +P+ R+V + G ++ F+A I F K + ++ E ++ + VP
Sbjct: 471 APAESPDVTQRMVIITGPPEAQFKAQGRI------FGKLKEENFFTAKEEVKLETHIKVP 524
Query: 533 ASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
+S G +IGKGG + ++ + A V V D P+ + EV +K
Sbjct: 525 SSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDEND-EVFVK 567
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 149/347 (42%), Gaps = 68/347 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + + A
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSTAC 259
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I ++ K ++ I L+++ S G +IGK G +K I E + +
Sbjct: 260 HMIMDIMQ-------KEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKI 312
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
++S D+ + ER + +KG +A +A +I + ++ + Q+ PG
Sbjct: 313 TISSLQDLTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQ---QSNLIPG 369
Query: 617 LIGNQFGMQNS-------------LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
L + G+ ++ + P G NP G ++ LGG G G++
Sbjct: 370 LSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSS-QLGGLYGVPPASGIS--- 425
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 723
+QH + P Q+ + +P + +GA+IG
Sbjct: 426 ----------------------HQHTQ----APEQEVVY--------LFIPTQAVGAIIG 451
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
K G I ++ + +GA I+I+ + E D R + +TG P+A AQ
Sbjct: 452 KKGQHIKQLARFAGASIKIAPA--ESPDVTQRMVIITGPPEAQFKAQ 496
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L +G+ I I+ + +P+ R+V + G ++ F+A I
Sbjct: 446 VGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEAQFKAQGRI------ 499
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + ++ E ++ + VP+S G +IGKGG + ++ + A V V D P+
Sbjct: 500 FGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 559
Query: 123 STEREVNIK 131
+ EV +K
Sbjct: 560 END-EVFVK 567
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 144/338 (42%), Gaps = 68/338 (20%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T+K + +++ SK+ I ++ E+ +T+ + + A +I ++
Sbjct: 209 VGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSTACHMIMDIMQ- 267
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
K ++ I L+++ S G +IGK G +K I E + + ++S D+
Sbjct: 268 ------KEAVDTKVTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDLT 321
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
+ ER + +KG +A +A +I + ++ + Q+ PGL + G+
Sbjct: 322 IYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQ---QSNLIPGLSLSALGIF 378
Query: 181 NS-------------LMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
++ + P G NP G ++ LGG G G++
Sbjct: 379 STGLSVLPPAAGPRGIPPVPPTGYNPFLGHSS-QLGGLYGVPPASGIS------------ 425
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
+QH + P Q+ + +P + +GA+IGK G I ++
Sbjct: 426 -------------HQHTQ----APEQEVVY--------LFIPTQAVGAIIGKKGQHIKQL 460
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
+ +GA I+I+ + E D R + +TG P+A AQ
Sbjct: 461 ARFAGASIKIAPA--ESPDVTQRMVIITGPPEAQFKAQ 496
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 30/171 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS--------- 490
R++ G+++GSIIG+ GE VK+LR E+ +KI I ++ ER+VTV S
Sbjct: 49 FRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDD 108
Query: 491 --------MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
D+LF+ + E+ H +Q + G + +L+VP+ Q G ++GK
Sbjct: 109 GDKLVSPAEDALFKIHDRVVA--EDLHSDQEEEGGPQ-----VNAKLLVPSDQIGCVLGK 161
Query: 543 GGSQIKTIRETSGASVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQI 589
GG ++ +R +GA + + D +P R V I G V +A++QI
Sbjct: 162 GGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQI 212
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 30/165 (18%)
Query: 3 GKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS--------------- 45
G+++GSIIG+ GE VK+LR E+ +KI I ++ ER+VTV S
Sbjct: 55 GRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKLVS 114
Query: 46 --MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 103
D+LF+ + E+ H +Q + G + +L+VP+ Q G ++GKGG ++
Sbjct: 115 PAEDALFKIHDRVVA--EDLHSDQEEEGGPQ-----VNAKLLVPSDQIGCVLGKGGQIVQ 167
Query: 104 TIRETSGASVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQI 144
+R +GA + + D +P R V I G V +A++QI
Sbjct: 168 NLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQI 212
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 141/337 (41%), Gaps = 45/337 (13%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDS--NDRTITMTGTP 318
Q+ ++ VP++ IG V+GKGG + +R +GA IRI K + +D + ++G
Sbjct: 143 QVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISG-- 200
Query: 319 DAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALP 378
DA + + L ++ + L+ ++ + + PS L G A P+ P
Sbjct: 201 DAAVVKKALHQIA-----SRLHHNPSRTQHLLGSAVPSVYPSGGSLMGPTAGPPIVGMAP 255
Query: 379 QLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGV 438
L P GG S G P+ + ++
Sbjct: 256 -----LVGP------------------YGGYKSDTGDWPPRSMYSAPR-----DEISSSK 287
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAF 498
+ +R + +G +IGK G + ++R++SG+ I + S+ + + I + + F
Sbjct: 288 EFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKGDDCLITISTKEFFEETF 347
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQL--RLIVPASQCGSIIGKGGSQIKTIRETSGA 556
S + ++ +S +I RL+V +S+ G +IGKGGS I +R + +
Sbjct: 348 SPTVEAAVLLQPRCSEK--SERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKS 405
Query: 557 SVYVAS-DMLP---NSTEREVNIKGVPDAVTQAIYQI 589
++ + S + LP + + V I G D A+ Q+
Sbjct: 406 NIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQV 442
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 159/384 (41%), Gaps = 68/384 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIG---------- 489
R I + VGSIIGK G T++ L+ E+G+ I I +S + ER++ +
Sbjct: 239 FRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSP 298
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+ D++ R S I+++ + +S + RL+VP+ G ++GKGGS I
Sbjct: 299 AQDAVLRVHSRISESSMD-------------KSSAVTARLLVPSQHIGCLLGKGGSIIAE 345
Query: 550 IRETSGASVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQICLIMVD---------- 595
+R+ +GA + + ++ +P +R V + G ++ A+ I + D
Sbjct: 346 MRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPG 405
Query: 596 -----------SPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNN---PLAG 641
+PP P G P F + MG DM ++ P
Sbjct: 406 GGMPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYPMPSF-RADRPMGPFDMVDHRPPPPHS 464
Query: 642 LAALG-------LGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRD 694
+ +G G GGG L+ + +A A + + PRN + + R
Sbjct: 465 MEHMGADRMPYSYGCEQGGGPRPFLDQPSPSAWAP-EAPNSEAPRNMPETVPP--ADFRK 521
Query: 695 GPSQKTNQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G TNQ E+ +P + IG + G G+ + EI+K+SGA I + + ++
Sbjct: 522 GAVAGTNQVATPSNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANA- 580
Query: 754 DRTITMTGTPDAIALAQYLINMSV 777
+ + G PD AQ L++ +
Sbjct: 581 --LVIICGDPDQTKKAQSLLHAFI 602
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 156/375 (41%), Gaps = 68/375 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIG----------SMDSLFRAF 53
VGSIIGK G T++ L+ E+G+ I I +S + ER++ + + D++ R
Sbjct: 248 VGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVH 307
Query: 54 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
S I+++ + +S + RL+VP+ G ++GKGGS I +R+ +GA +
Sbjct: 308 SRISESSMD-------------KSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGI 354
Query: 114 YV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQICLIMVD------------------- 150
+ ++ +P +R V + G ++ A+ I + D
Sbjct: 355 RIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPG 414
Query: 151 --SPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNN---PLAGLAALG---- 201
+PP P G P F + MG DM ++ P + +G
Sbjct: 415 GNAPPHHPRQEPAPPHPTGGMPPYPMPSF-RADRPMGPFDMVDHRPPPPHSMEHMGADRM 473
Query: 202 ---LGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 258
G GGG L+ + +A A + + PRN + + R G TNQ
Sbjct: 474 PYSYGCEQGGGPRPFLDQPSPSAWAP-EAPNSEAPRNMPETVPP--ADFRKGAVAGTNQV 530
Query: 259 QNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
E+ +P + IG + G G+ + EI+K+SGA I + + ++ + + G
Sbjct: 531 ATPSNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANA---LVIICGD 587
Query: 318 PDAIALAQYLINMSV 332
PD AQ L++ +
Sbjct: 588 PDQTKKAQSLLHAFI 602
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 155/341 (45%), Gaps = 65/341 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST---PERIVTVIGSMDSLFRAF 498
+R ++Q + VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 139 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCTNA- 197
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
K I E + + L GE I LR++ + G IIGKGG+ IK I + + +
Sbjct: 198 ---CKKIMEVTQQEAYGL-SKGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKI 250
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V+S D+ + ER + +KG D +++A I + S PQ+ PG
Sbjct: 251 TVSSINDINNFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQA---MAPQSLMFPG 307
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL-ASSQLKTN 675
L +P+A ++ G+G +S G GL + A + L T
Sbjct: 308 L-------------------HPMAMMSTAGMGYSS---RGPGLYGSGPAPYPYQTSLPTQ 345
Query: 676 H-MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 734
+P Q T + +PN +GA+IG G+ I I +
Sbjct: 346 QGIPIGDTQE-----------------------TAFLYIPNTSVGAIIGSKGSHIRNIIR 382
Query: 735 ISGAMIRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 773
SGA ++I+ +++ E NDR +T+ G+P++ AQYLI
Sbjct: 383 FSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 423
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 152/337 (45%), Gaps = 65/337 (19%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSST---PERIVTVIGSMDSLFRAFSLIT 57
+Q + VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 143 VQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCTNA----C 198
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
K I E + + L GE I LR++ + G IIGKGG+ IK I + + + V+S
Sbjct: 199 KKIMEVTQQEAYGLS-KGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSS 254
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG D +++A I + S PQ+ PGL
Sbjct: 255 INDINNFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQA---MAPQSLMFPGL--- 308
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL-ASSQLKTNH-MP 233
+P+A ++ G+G +S G GL + A + L T +P
Sbjct: 309 ----------------HPMAMMSTAGMGYSS---RGPGLYGSGPAPYPYQTSLPTQQGIP 349
Query: 234 RNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA 293
Q T + +PN +GA+IG G+ I I + SGA
Sbjct: 350 IGDTQE-----------------------TAFLYIPNTSVGAIIGSKGSHIRNIIRFSGA 386
Query: 294 MIRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 328
++I+ +++ E NDR +T+ G+P++ AQYLI
Sbjct: 387 SVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 423
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 57/310 (18%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+I+ + N LIG +IGKGGT I +I + + I +S ++ + +R IT+ G+ D
Sbjct: 216 EISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNLERIITVKGSIDN 275
Query: 321 IALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQL 380
++ A+ +I+ LR S +N+L + AP
Sbjct: 276 MSKAESMISSK---LRQ---------------SYENDLQAMAP----------------- 300
Query: 381 AQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSG--GFGGVPQGPNYANIQTTGV 438
Q L PG L+ + +S G +G S G G SG + P I
Sbjct: 301 -QSLMFPG-LHPMAMMSTAG-----MGYSSRGPGLYGSGPAPYPYQTSLPTQQGIPIGDT 353
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSM 491
Q + VG+IIG G ++ + SG+ + I+ + P +R VT++GS
Sbjct: 354 QETAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSP 413
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+S ++A LI F K + + G E + + ++VP++Q G IIGKGG ++ ++
Sbjct: 414 ESQWKAQYLI------FEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQ 467
Query: 552 ETSGASVYVA 561
+G+ + ++
Sbjct: 468 RVTGSIIKLS 477
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 13/118 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ + P +R VT++GS +S ++A LI
Sbjct: 366 VGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI-- 423
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
F K + + G E + + ++VP++Q G IIGKGG ++ ++ +G+ + ++
Sbjct: 424 ----FEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLS 477
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 150 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 209
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 210 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 269
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 270 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 319
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 160 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 219
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 220 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 279
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 280 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 319
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 525 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 584
Query: 325 QYLINMSV 332
QYLI+ V
Sbjct: 585 QYLISQRV 592
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 525 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 584
Query: 770 QYLINMSV 777
QYLI+ V
Sbjct: 585 QYLISQRV 592
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 150 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN- 208
Query: 140 AIYQICLIMVDSPPKGATIP 159
A++ V P+ T P
Sbjct: 209 AVHSFIAEKVREIPQAMTKP 228
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 584
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 150 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN- 208
Query: 585 AIYQICLIMVDSPPKGATIP 604
A++ V P+ T P
Sbjct: 209 AVHSFIAEKVREIPQAMTKP 228
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%)
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
++ + ++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT
Sbjct: 144 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT 203
Query: 318 PDAIALAQYLINMSVE 333
+A+ I V
Sbjct: 204 AEALNAVHSFIAEKVR 219
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%)
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
++ + ++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT
Sbjct: 144 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT 203
Query: 763 PDAIALAQYLINMSVE 778
+A+ I V
Sbjct: 204 AEALNAVHSFIAEKVR 219
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST----PERIVTVIGSMDSLF 495
++ + I+ G IIGK G TVK + E+SG+ + +S ER+VTV G + +
Sbjct: 246 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 305
Query: 496 RAFSLITKNIEE 507
+A S I + ++E
Sbjct: 306 KAVSAIVQKVQE 317
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + LP + R V I G P A
Sbjct: 524 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 583
Query: 140 AIYQI 144
A Y I
Sbjct: 584 AQYLI 588
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + LP + R V I G P A
Sbjct: 524 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 583
Query: 585 AIYQI 589
A Y I
Sbjct: 584 AQYLI 588
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 151/346 (43%), Gaps = 34/346 (9%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG +IGK G VK L+ E+G+ I + + ER++T+ S + R I
Sbjct: 246 RVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILV 305
Query: 63 FHKNQN----KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV-YVAS 117
F+++ K L + + RL+VP++Q G ++GKGG+ I +R+ SGA + + S
Sbjct: 306 FNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGS 365
Query: 118 DMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDS--PPK---GATIPYRPLPQNAGG 169
D +P ++ V I G V +Y I + D+ P K GA I
Sbjct: 366 DQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISP 425
Query: 170 PGLIGN--QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 227
G + + FG+ +S+ +P + + L G+ L+ L SQ
Sbjct: 426 YGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHL------GLSHSLDHPTSPRLWPSQT 479
Query: 228 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 287
T PRN G K+ N T E+ +P +IG+V G+ G + +
Sbjct: 480 VTGVNPRNIKGGIEL-------GSGSKSAIITNT-TVEIVIPENVIGSVYGENGNNLARL 531
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
RKISGA + + E ++DR + ++GTPD AQ L+ +
Sbjct: 532 RKISGAKVTL---HEPRPGTSDRIVIISGTPDETQAAQSLLQAFIH 574
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 151/346 (43%), Gaps = 34/346 (9%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
VG +IGK G VK L+ E+G+ I + + ER++T+ S + R I
Sbjct: 246 RVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILV 305
Query: 508 FHKNQN----KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV-YVAS 562
F+++ K L + + RL+VP++Q G ++GKGG+ I +R+ SGA + + S
Sbjct: 306 FNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGS 365
Query: 563 DMLPNST---EREVNIKGVPDAVTQAIYQICLIMVDS--PPK---GATIPYRPLPQNAGG 614
D +P ++ V I G V +Y I + D+ P K GA I
Sbjct: 366 DQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISP 425
Query: 615 PGLIGN--QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQL 672
G + + FG+ +S+ +P + + L G+ L+ L SQ
Sbjct: 426 YGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHL------GLSHSLDHPTSPRLWPSQT 479
Query: 673 KTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEI 732
T PRN G K+ N T E+ +P +IG+V G+ G + +
Sbjct: 480 VTGVNPRNIKGGIEL-------GSGSKSAIITNT-TVEIVIPENVIGSVYGENGNNLARL 531
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
RKISGA + + E ++DR + ++GTPD AQ L+ +
Sbjct: 532 RKISGAKVTL---HEPRPGTSDRIVIISGTPDETQAAQSLLQAFIH 574
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 117/257 (45%), Gaps = 31/257 (12%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE--DSNDRTITMTGTPD 319
++ + VP+ +G ++GKGGT I E+RK SGA IRI S + + ND+ + ++G
Sbjct: 327 VSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFV 386
Query: 320 AIALAQYLINMSVELLRAN------LNGEG-GGESNMDDFSSDNNLPSSAPLAGLNASNP 372
+ Y I LR N LNG G S M++ S + A GL++S
Sbjct: 387 NVQDGLYHITGR---LRDNLFPSKTLNGAGIRSSSAMNEISPYGRVRDPASF-GLHSS-- 440
Query: 373 LAAALPQLAQILTKPGALNAL-TSLSALGGLSDLLGGGSSGGGSGNSGGFGGVP--QGPN 429
P ++ T +++ L S S S L + G GG+ G
Sbjct: 441 -VGVSPSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGIELGSGSK 499
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTV 487
A I T V+ ++ +GS+ G++G + +LR+ SG+K+ + + T +RIV +
Sbjct: 500 SAIITNTTVE----IVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVII 555
Query: 488 IGSMD------SLFRAF 498
G+ D SL +AF
Sbjct: 556 SGTPDETQAAQSLLQAF 572
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 14/147 (9%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
VG IIGK GET+K L+ +SG+KI ++ D ++P R+V + G+ D++ A LI + +
Sbjct: 123 VGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIATAEKLIKEVL 182
Query: 61 EEFHKNQN----KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
E N + + G G + ++ +P ++ G IIGKGG IK+++ T+GA + V
Sbjct: 183 AEAESGGNGLVTRRMTGQGGADEFSMK--IPNNKVGLIIGKGGETIKSMQATTGARIQVI 240
Query: 117 SDMLP---NSTEREVNIKGVPDAVTQA 140
LP STER + I+G + + A
Sbjct: 241 PLHLPPGDTSTERTLKIEGTSEQIESA 267
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 14/147 (9%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 505
VG IIGK GET+K L+ +SG+KI ++ D ++P R+V + G+ D++ A LI + +
Sbjct: 123 VGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIATAEKLIKEVL 182
Query: 506 EEFHKNQN----KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
E N + + G G + ++ +P ++ G IIGKGG IK+++ T+GA + V
Sbjct: 183 AEAESGGNGLVTRRMTGQGGADEFSMK--IPNNKVGLIIGKGGETIKSMQATTGARIQVI 240
Query: 562 SDMLP---NSTEREVNIKGVPDAVTQA 585
LP STER + I+G + + A
Sbjct: 241 PLHLPPGDTSTERTLKIEGTSEQIESA 267
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+K++ +PN +G +IGKGG I ++ SGA I++++ + + +S +R + +TGT DAIA
Sbjct: 113 SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIA 172
Query: 323 LAQYLINMSVE--------LLRANLNGEGGGESNMDDFS 353
A+ LI + L+ + G+GG D+FS
Sbjct: 173 TAEKLIKEVLAEAESGGNGLVTRRMTGQGG----ADEFS 207
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+K++ +PN +G +IGKGG I ++ SGA I++++ + + +S +R + +TGT DAIA
Sbjct: 113 SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIA 172
Query: 768 LAQYLINMSVE--------LLRANLNGEGGGESNMDDFS 798
A+ LI + L+ + G+GG D+FS
Sbjct: 173 TAEKLIKEVLAEAESGGNGLVTRRMTGQGG----ADEFS 207
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
++ +P + G IIGKGG IK ++ SGA + V DM PNS R V + G DA+ A
Sbjct: 115 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIATA 174
Query: 141 IYQICLIMVDS 151
I ++ ++
Sbjct: 175 EKLIKEVLAEA 185
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 585
++ +P + G IIGKGG IK ++ SGA + V DM PNS R V + G DA+ A
Sbjct: 115 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIATA 174
Query: 586 IYQICLIMVDS 596
I ++ ++
Sbjct: 175 EKLIKEVLAEA 185
Score = 39.7 bits (91), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED-SNDRTITMTGTPDAIALA 324
M +PN +G +IGKGG I ++ +GA I++ D S +RT+ + GT + I A
Sbjct: 208 MKIPNNKVGLIIGKGGETIKSMQATTGARIQVIPLHLPPGDTSTERTLKIEGTSEQIESA 267
Query: 325 QYLIN 329
+ L++
Sbjct: 268 KQLVD 272
Score = 39.7 bits (91), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED-SNDRTITMTGTPDAIALA 769
M +PN +G +IGKGG I ++ +GA I++ D S +RT+ + GT + I A
Sbjct: 208 MKIPNNKVGLIIGKGGETIKSMQATTGARIQVIPLHLPPGDTSTERTLKIEGTSEQIESA 267
Query: 770 QYLIN 774
+ L++
Sbjct: 268 KQLVD 272
>gi|410904074|ref|XP_003965518.1| PREDICTED: far upstream element-binding protein 3-like [Takifugu
rubripes]
Length = 569
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 18/151 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG IIG++GE ++K++ ++G +I D +PER+ V+G +D A +I + ++
Sbjct: 266 VGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISPERVAQVMGQLDHCHHAVHIINELVQTA 325
Query: 64 HKNQ------------NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
+ + ++GG+G Q ++ VPA +CG +IGKGG IK I+E S A
Sbjct: 326 QERDGFGGVMGRRGRGDCNMGGSGGLQ--EVTYAVPADKCGLVIGKGGETIKNIKEQSRA 383
Query: 112 SVYVASDMLPNS--TEREVNIKGVPDAVTQA 140
V + + PN+ + R +I+G P + +A
Sbjct: 384 HVELQRNPPPNTDPSVRIFSIRGTPQQLEKA 414
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 18/151 (11%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG IIG++GE ++K++ ++G +I D +PER+ V+G +D A +I + ++
Sbjct: 266 VGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISPERVAQVMGQLDHCHHAVHIINELVQTA 325
Query: 509 HKNQ------------NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
+ + ++GG+G Q ++ VPA +CG +IGKGG IK I+E S A
Sbjct: 326 QERDGFGGVMGRRGRGDCNMGGSGGLQ--EVTYAVPADKCGLVIGKGGETIKNIKEQSRA 383
Query: 557 SVYVASDMLPNS--TEREVNIKGVPDAVTQA 585
V + + PN+ + R +I+G P + +A
Sbjct: 384 HVELQRNPPPNTDPSVRIFSIRGTPQQLEKA 414
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIGK GE + +++ ESG KI I+ S +R T+ GS +++ A L+ + +E
Sbjct: 88 KMVGFIIGKGGEQISRIQLESGCKIQIASDSGGMLDRPCTLTGSPENIELAKRLLNEIVE 147
Query: 62 EFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASD 118
+ H + GNG Q ++++PA++ G +IGK G IK ++E +G + + D
Sbjct: 148 QCRYGPGFHCDMDGNGSIQ----QILIPANKVGLVIGKKGETIKQLQERTGVQMIMIQDD 203
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 150
LP ++ + I G P V QA + ++ D
Sbjct: 204 PLPTGADKPLRITGDPQKVQQARELVVKLIRD 235
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIGK GE + +++ ESG KI I+ S +R T+ GS +++ A L+ + +E
Sbjct: 88 KMVGFIIGKGGEQISRIQLESGCKIQIASDSGGMLDRPCTLTGSPENIELAKRLLNEIVE 147
Query: 507 EFHKNQNKH--LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS-VYVASD 563
+ H + GNG Q ++++PA++ G +IGK G IK ++E +G + + D
Sbjct: 148 QCRYGPGFHCDMDGNGSIQ----QILIPANKVGLVIGKKGETIKQLQERTGVQMIMIQDD 203
Query: 564 MLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
LP ++ + I G P V QA + ++ D
Sbjct: 204 PLPTGADKPLRITGDPQKVQQARELVVKLIRD 235
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T++ VP++++G +IGKGG +I I+ SG I+I+ S DR T+TG+P+ I
Sbjct: 80 TEDFKVPDKMVGFIIGKGGEQISRIQLESGCKIQIASDS---GGMLDRPCTLTGSPENIE 136
Query: 323 LAQYLINMSVELLR 336
LA+ L+N VE R
Sbjct: 137 LAKRLLNEIVEQCR 150
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T++ VP++++G +IGKGG +I I+ SG I+I+ S DR T+TG+P+ I
Sbjct: 80 TEDFKVPDKMVGFIIGKGGEQISRIQLESGCKIQIASDS---GGMLDRPCTLTGSPENIE 136
Query: 768 LAQYLINMSVELLR 781
LA+ L+N VE R
Sbjct: 137 LAKRLLNEIVEQCR 150
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 5 EVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNI 60
+VG +IGK GET+K+L+E +G + I I D P ++ + + G + +A L+ K I
Sbjct: 174 KVGLVIGKKGETIKQLQERTGVQMIMIQDDPLPTGADKPLRITGDPQKVQQARELVVKLI 233
Query: 61 EEFHKNQNKHLGGNGE--SQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
+ K+Q G + S++ L ++VP G IIG+ G I+ I+ +G +
Sbjct: 234 RD--KDQGDFRVGRADFGSKMGGSTLDVVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFK 291
Query: 117 SDMLPNSTEREVNIKGVPDAVTQAIYQI 144
D S ER + G D A++ I
Sbjct: 292 QDD-GISPERVAQVMGQLDHCHHAVHII 318
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 450 EVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNI 505
+VG +IGK GET+K+L+E +G + I I D P ++ + + G + +A L+ K I
Sbjct: 174 KVGLVIGKKGETIKQLQERTGVQMIMIQDDPLPTGADKPLRITGDPQKVQQARELVVKLI 233
Query: 506 EEFHKNQNKHLGGNGE--SQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+ K+Q G + S++ L ++VP G IIG+ G I+ I+ +G +
Sbjct: 234 RD--KDQGDFRVGRADFGSKMGGSTLDVVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFK 291
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQI 589
D S ER + G D A++ I
Sbjct: 292 QDD-GISPERVAQVMGQLDHCHHAVHII 318
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 268 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 327
VP + G VIGKGG I I++ S A + + ++ D + R ++ GTP + A+ L
Sbjct: 358 VPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPNTDPSVRIFSIRGTPQQLEKARQL 417
Query: 328 INMSV 332
I+ +
Sbjct: 418 IDERI 422
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 713 VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYL 772
VP + G VIGKGG I I++ S A + + ++ D + R ++ GTP + A+ L
Sbjct: 358 VPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPNTDPSVRIFSIRGTPQQLEKARQL 417
Query: 773 INMSV 777
I+ +
Sbjct: 418 IDERI 422
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 61/339 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAF 498
+R ++Q VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 114 LRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITIYGNPENCTNAC 173
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
I + +++ N NK GE I L+++ + G IIGKGG+ IK I + + +
Sbjct: 174 KKILEVMQQEANNTNK-----GE---ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKI 225
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V+S D+ + ER + +KG D +++A I + S PQ+ PG
Sbjct: 226 TVSSINDINSFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQA---MAPQSMMFPG 282
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
L +P+A ++ G+G +S G GL + A +
Sbjct: 283 L-------------------HPMAMMSTAGMGYSS---RGPGLYGSGPAPYPYQ----SS 316
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
+P Q P+ T Q T + +PN +GA+IG G+ I I + S
Sbjct: 317 LPTQQGV------------PASDT-----QETTFLYIPNNSVGAIIGTKGSHIRNIIRFS 359
Query: 737 GAMIRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 773
GA ++I+ +++ E +R +T+ G+P++ AQYLI
Sbjct: 360 GASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 398
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 61/335 (18%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAFSLIT 57
+Q VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A I
Sbjct: 118 VQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITIYGNPENCTNACKKIL 177
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
+ +++ N NK GE I L+++ + G IIGKGG+ IK I + + + V+S
Sbjct: 178 EVMQQEANNTNK-----GE---ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSS 229
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG D +++A I + S PQ+ PGL
Sbjct: 230 INDINSFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQA---MAPQSMMFPGL--- 283
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+P+A ++ G+G +S G GL + A + +P
Sbjct: 284 ----------------HPMAMMSTAGMGYSS---RGPGLYGSGPAPYPYQ----SSLPTQ 320
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
Q P+ T Q T + +PN +GA+IG G+ I I + SGA +
Sbjct: 321 QGV------------PASDT-----QETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASV 363
Query: 296 RISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 328
+I+ +++ E +R +T+ G+P++ AQYLI
Sbjct: 364 KIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 398
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 144/330 (43%), Gaps = 58/330 (17%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
N + +IT ++ N LIG +IGKGG I I + + I +S ++ + +R IT+
Sbjct: 186 NTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLERIITVK 245
Query: 316 GTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAA 375
G+ D ++ A+ +I+ LR S +N+L + AP
Sbjct: 246 GSIDNMSKAESMISSK---LRQ---------------SYENDLQAMAP------------ 275
Query: 376 ALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQG--PNYANI 433
Q + PG L+ + +S G +G S G G SG Q P +
Sbjct: 276 ------QSMMFPG-LHPMAMMSTAG-----MGYSSRGPGLYGSGPAPYPYQSSLPTQQGV 323
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVT 486
+ Q + VG+IIG G ++ + SG+ + I+ + P ER VT
Sbjct: 324 PASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVT 383
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
++GS +S ++A LI F K + + E + + ++VP++Q G IIGKGG
Sbjct: 384 IVGSPESQWKAQYLI------FEKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQN 437
Query: 547 IKTIRETSGASVYVASDM-LPNSTEREVNI 575
++ ++ +G+ + ++ P S E E +
Sbjct: 438 VRELQRVTGSVIKLSEQQATPPSAEEETTV 467
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ + P ER VT++GS +S ++A LI
Sbjct: 341 VGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI-- 398
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
F K + + E + + ++VP++Q G IIGKGG ++ ++ +G+ + ++
Sbjct: 399 ----FEKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQ 454
Query: 119 M-LPNSTEREVNI 130
P S E E +
Sbjct: 455 QATPPSAEEETTV 467
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 71 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
L G+G LR++V + G+IIG+ G+ I+ I + + A V V S E+ + I
Sbjct: 103 LPGSGRQTDFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITI 162
Query: 131 KGVPDAVTQAIYQICLIM 148
G P+ T A +I +M
Sbjct: 163 YGNPENCTNACKKILEVM 180
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 516 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 575
L G+G LR++V + G+IIG+ G+ I+ I + + A V V S E+ + I
Sbjct: 103 LPGSGRQTDFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITI 162
Query: 576 KGVPDAVTQAIYQICLIM 593
G P+ T A +I +M
Sbjct: 163 YGNPENCTNACKKILEVM 180
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 160/363 (44%), Gaps = 72/363 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAF 498
+R ++Q + VG+IIG+ G T++ + ++S +++ + + E+ +T+ G+ ++ A
Sbjct: 67 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYGNPENCTMAC 126
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
I + +++ + NK GE I L+++ + G IIGK G+ IK I + + +
Sbjct: 127 KKILEVMQQEANSTNK-----GE---ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKI 178
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V+S D+ + ER + +KG + +++ QI + S
Sbjct: 179 TVSSINDISSFNLERIITVKGSIENMSKGESQISAKLRQS-------------------- 218
Query: 617 LIGNQFGMQNSLMG-APDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
+N L AP P GL + + +G GMG A A AS T
Sbjct: 219 -------YENDLQALAPQTIMFP--GLHPMAMMSTAGNGMGFTGRTAGATASASGSGATG 269
Query: 676 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKI 735
P G + Q+ T + +PN +GA+IG G I I +
Sbjct: 270 MYP----------------GSNFPIEVQE---TTYLYIPNNAVGAIIGTKGLHIRNIIRF 310
Query: 736 SGAMIRIS--KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESN 793
SGA ++I+ ++ + +E +R +T+ GTP+A AQYLI E +R E G S
Sbjct: 311 SGASVKIAPLEADKPQEQQTERKVTIIGTPEAQWKAQYLI---FEKMR-----EEGFVSG 362
Query: 794 MDD 796
DD
Sbjct: 363 TDD 365
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 72/359 (20%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAFSLIT 57
+Q + VG+IIG+ G T++ + ++S +++ + + E+ +T+ G+ ++ A I
Sbjct: 71 VQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYGNPENCTMACKKIL 130
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
+ +++ + NK GE I L+++ + G IIGK G+ IK I + + + V+S
Sbjct: 131 EVMQQEANSTNK-----GE---ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSS 182
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG + +++ QI + S
Sbjct: 183 INDISSFNLERIITVKGSIENMSKGESQISAKLRQS------------------------ 218
Query: 176 QFGMQNSLMG-APDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPR 234
+N L AP P GL + + +G GMG A A AS T P
Sbjct: 219 ---YENDLQALAPQTIMFP--GLHPMAMMSTAGNGMGFTGRTAGATASASGSGATGMYP- 272
Query: 235 NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAM 294
G + Q+ T + +PN +GA+IG G I I + SGA
Sbjct: 273 ---------------GSNFPIEVQE---TTYLYIPNNAVGAIIGTKGLHIRNIIRFSGAS 314
Query: 295 IRIS--KSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDD 351
++I+ ++ + +E +R +T+ GTP+A AQYLI E +R E G S DD
Sbjct: 315 VKIAPLEADKPQEQQTERKVTIIGTPEAQWKAQYLI---FEKMR-----EEGFVSGTDD 365
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 148/347 (42%), Gaps = 56/347 (16%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+I ++ N LIG +IGK G I I + + I +S ++ + +R IT+ G+ +
Sbjct: 144 EICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDISSFNLERIITVKGSIE- 202
Query: 321 IALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQL 380
NMS GE + + S +N+L + AP
Sbjct: 203 --------NMS--------KGESQISAKLRQ-SYENDLQALAP----------------- 228
Query: 381 AQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQR 440
Q + PG L+ + +S G G + S + G G+ G N+ VQ
Sbjct: 229 -QTIMFPG-LHPMAMMSTAGNGMGFTGRTAGATASASGSGATGMYPGSNFP----IEVQE 282
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDS 493
+ VG+IIG G ++ + SG+ + I+ ++ P ER VT+IG+ ++
Sbjct: 283 TTYLYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTPEA 342
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
++A LI F K + + + + + + VP++Q G IIGKGG ++ ++
Sbjct: 343 QWKAQYLI------FEKMREEGFVSGTDDVRLTVEIFVPSAQVGRIIGKGGQNVRELQRV 396
Query: 554 SGASVYVASDM--LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
+G+ + + P E V+I G +V A +I +M+ + P
Sbjct: 397 TGSIIKLPEHTASAPVDEETTVHIIGPFFSVQSAQRRIRTMMLATNP 443
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ ++ P ER VT+IG+ ++ ++A LI
Sbjct: 293 VGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTPEAQWKAQYLI-- 350
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
F K + + + + + + VP++Q G IIGKGG ++ ++ +G+ + +
Sbjct: 351 ----FEKMREEGFVSGTDDVRLTVEIFVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEH 406
Query: 119 M--LPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
P E V+I G +V A +I +M+ + P
Sbjct: 407 TASAPVDEETTVHIIGPFFSVQSAQRRIRTMMLATNP 443
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
LR++V + G+IIG+ GS I+ I + S A V V S E+ + I G P+ T A
Sbjct: 67 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYGNPENCTMAC 126
Query: 142 YQICLIM 148
+I +M
Sbjct: 127 KKILEVM 133
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 25/161 (15%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R I+ +VGSIIG+ G+ +KK+ EE+ ++I + D + TP+R+V + G
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD++ R F K + +N+++ ++ +RL+V ++Q ++IGK GS IK+
Sbjct: 143 AMDAVIRVF----KRVSGLSENEDE-----AKASFCSIRLLVASTQAINLIGKQGSLIKS 193
Query: 550 IRETSGASVYVAS-DMLP---NSTEREVNIKGVPDAVTQAI 586
I+E++GASV V S D +P + ER V ++G V +A+
Sbjct: 194 IQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKAL 234
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 90/153 (58%), Gaps = 25/153 (16%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLFRA 52
+VGSIIG+ G+ +KK+ EE+ ++I + D + TP+R+V + G +MD++ R
Sbjct: 91 KVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRV 150
Query: 53 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
F K + +N+++ ++ +RL+V ++Q ++IGK GS IK+I+E++GAS
Sbjct: 151 F----KRVSGLSENEDE-----AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGAS 201
Query: 113 VYVAS-DMLP---NSTEREVNIKGVPDAVTQAI 141
V V S D +P + ER V ++G V +A+
Sbjct: 202 VRVLSGDEMPFYAGADERMVELQGESLKVLKAL 234
>gi|401626761|gb|EJS44683.1| pbp2p [Saccharomyces arboricola H-6]
Length = 416
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + K I+G G T+ K++ E+ ++I +S++ PERIV V G+ D + +A+
Sbjct: 71 HLRMLCLVKHASLIVGHKGATISKIKSETSARINVSNNIRGVPERIVYVRGTCDDVAKAY 130
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
S+I + + +++N+ + E + + L++P G IIGK GS+++ I + S A +
Sbjct: 131 SMIVRAL--LEEHENEDQEEDIE---VTINLLIPHHLMGCIIGKRGSRLREIEDLSAAKL 185
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ + + L S +R + I GVPDA+ A + I
Sbjct: 186 FASPNQLLLSNDRILTISGVPDAIHIATFYI 216
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 83/143 (58%), Gaps = 7/143 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K I+G G T+ K++ E+ ++I +S++ PERIV V G+ D + +A+S+I + +
Sbjct: 79 KHASLIVGHKGATISKIKSETSARINVSNNIRGVPERIVYVRGTCDDVAKAYSMIVRAL- 137
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+++N+ + E + + L++P G IIGK GS+++ I + S A ++ + + L
Sbjct: 138 -LEEHENEDQEEDIE---VTINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL 193
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
S +R + I GVPDA+ A + I
Sbjct: 194 LSNDRILTISGVPDAIHIATFYI 216
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 116/274 (42%), Gaps = 50/274 (18%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
++T + +P+ L+G +IGK G+++ EI +S A ++ S + SNDR +T++G PDA
Sbjct: 151 EVTINLLIPHHLMGCIIGKRGSRLREIEDLSAA--KLFASPNQLLLSNDRILTISGVPDA 208
Query: 321 IALAQY-----LINMSVE-----LLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNAS 370
I +A + L+N +E L R+ S + D S N A L+
Sbjct: 209 IHIATFYIGQTLLNFQMESPQKKLKRSIFYQPTQFNSVLIDHSQPN--------AILHQR 260
Query: 371 NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNY 430
N P Q+ +P S ++ + N+ F PN+
Sbjct: 261 N--HQYHPNDKQLSGRPN-----RKFSVSSTFLNMAPPQYTTASVANATAF-----QPNF 308
Query: 431 A---------NIQTTGVQRRMRHIMQGKE-------VGSIIGKSGETVKKLREESGSKIY 474
++ +G+ + + +E VG++IGK G+ + ++E +G I
Sbjct: 309 VIPNVRILDGSVVNSGISNHLSMNLVQQEIFIDENFVGNVIGKDGKHINSVKESTGCSII 368
Query: 475 ISD--SSTPERIVTVIGSMDSLFRAFSLITKNIE 506
I D ER +++ G+ + A LI+ IE
Sbjct: 369 IQDPVECASERRLSIRGTFMASQAAIMLISNKIE 402
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
++T + +P+ L+G +IGK G+++ EI +S A ++ S + SNDR +T++G PDA
Sbjct: 151 EVTINLLIPHHLMGCIIGKRGSRLREIEDLSAA--KLFASPNQLLLSNDRILTISGVPDA 208
Query: 766 IALAQYLI 773
I +A + I
Sbjct: 209 IHIATFYI 216
>gi|148676563|gb|EDL08510.1| mCG130458 [Mus musculus]
Length = 569
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 120
H +G S + +L ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHNDMDGNSTIQEL--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIM 148
P ++ + I G P V QA + I+
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 565
H +G S + +L ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHNDMDGNSTIQEL--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 566 PNSTEREVNIKGVPDAVTQAIYQICLIM 593
P ++ + I G P V QA + I+
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAARIINELI--L 322
Query: 64 HKNQNKHLGG--------NGESQ--------LIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ + LGG G S + ++ VPA +CG +IGKGG IK+I +
Sbjct: 323 TAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 144
SGA V + + PN+ R I+G P + A + I
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARHLI 421
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAARIINELI--L 322
Query: 509 HKNQNKHLGG--------NGESQ--------LIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+ + LGG G S + ++ VPA +CG +IGKGG IK+I +
Sbjct: 323 TAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 589
SGA V + + PN+ R I+G P + A + I
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARHLI 421
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 317 TPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGL 367
TP++I A+ L+ V+ R NG G ++MD S+ L A GL
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGP-GFHNDMDGNSTIQELLIPASKVGL 176
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 762 TPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGL 812
TP++I A+ L+ V+ R NG G ++MD S+ L A GL
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGP-GFHNDMDGNSTIQELLIPASKVGL 176
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P + +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVAR 418
Query: 326 YLINMSV 332
+LI+ V
Sbjct: 419 HLIDEKV 425
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P + +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVAR 418
Query: 771 YLINMSV 777
+LI+ V
Sbjct: 419 HLIDEKV 425
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSL 500
++ +VG +IGK GET+K+L+E +G K + I D P ++ + + G + +A +
Sbjct: 168 LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREM 227
Query: 501 ITKNIEEFHKNQNKHLG---------GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+ + I E K+Q G G G ++ R +V G +IG+ G IK I+
Sbjct: 228 VLEIIRE--KDQADFRGVRSDFTSRAGGGSIEVSVPRFVV-----GIVIGRNGEMIKKIQ 280
Query: 552 ETSGASV-YVASDMLPNSTEREVNIKGVPDAVTQA 585
+G + + D + S ER + G PD A
Sbjct: 281 NDAGVRIQFKPDDGI--SPERAAQVMGPPDRCQHA 313
>gi|74208425|dbj|BAE26399.1| unnamed protein product [Mus musculus]
Length = 575
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 120
H +G S + +L ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHNDMDGNSTIQEL--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIM 148
P ++ + I G P V QA + I+
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 565
H +G S + +L ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHNDMDGNSTIQEL--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 566 PNSTEREVNIKGVPDAVTQAIYQICLIM 593
P ++ + I G P V QA + I+
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAPIINELI--L 322
Query: 64 HKNQNKHLGG--------NGESQ--------LIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ + LGG G S + ++ VPA +CG +IGKGG IK+I +
Sbjct: 323 TAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 144
SGA V + + PN+ R I+G P + A + I
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARHLI 421
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAPIINELI--L 322
Query: 509 HKNQNKHLGG--------NGESQ--------LIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+ + LGG G S + ++ VPA +CG +IGKGG IK+I +
Sbjct: 323 TAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 589
SGA V + + PN+ R I+G P + A + I
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARHLI 421
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 317 TPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGL 367
TP++I A+ L+ V+ R NG G ++MD S+ L A GL
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGP-GFHNDMDGNSTIQELLIPASKVGL 176
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 762 TPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGL 812
TP++I A+ L+ V+ R NG G ++MD S+ L A GL
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGP-GFHNDMDGNSTIQELLIPASKVGL 176
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P + +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVAR 418
Query: 326 YLINMSV 332
+LI+ V
Sbjct: 419 HLIDEKV 425
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P + +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVAR 418
Query: 771 YLINMSV 777
+LI+ V
Sbjct: 419 HLIDEKV 425
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSL 500
++ +VG +IGK GET+K+L+E +G K + I D P ++ + + G + +A +
Sbjct: 168 LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREM 227
Query: 501 ITKNIEEFHKNQNKHLG---------GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+ + I E K+Q G G G ++ R +V G +IG+ G IK I+
Sbjct: 228 VLEIIRE--KDQADFRGVRSDFTSRAGGGSIEVSVPRFVV-----GIVIGRNGEMIKKIQ 280
Query: 552 ETSGASV-YVASDMLPNSTEREVNIKGVPDAVTQA 585
+G + + D + S ER + G PD A
Sbjct: 281 NDAGVRIQFKPDDGI--SPERAAQVMGPPDRCQHA 313
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
G+IIGK GET+ L++E+G+++ +S S+ T ER+ + GS++ + R I + I+
Sbjct: 50 GAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLRIHEFIMEKIK 109
Query: 62 EFHKNQNKHLGGNGESQLI----QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
E K Q Q++++VP S G IIGKGGS IK I+E SGA V ++
Sbjct: 110 EKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQ 169
Query: 118 DMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
++ ER + + G D +A I +V+ P G+ +
Sbjct: 170 KSKDHALAERCITVIGEMDNNKKACQLILAKIVEDPQSGSCL 211
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
G+IIGK GET+ L++E+G+++ +S S+ T ER+ + GS++ + R I + I+
Sbjct: 50 GAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLRIHEFIMEKIK 109
Query: 507 EFHKNQNKHLGGNGESQLI----QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 562
E K Q Q++++VP S G IIGKGGS IK I+E SGA V ++
Sbjct: 110 EKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQ 169
Query: 563 DMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
++ ER + + G D +A I +V+ P G+ +
Sbjct: 170 KSKDHALAERCITVIGEMDNNKKACQLILAKIVEDPQSGSCL 211
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
P ++ + + +++ V ++GA++G GG + EI++ SGA I+ISK + +R
Sbjct: 440 PPSAADKCSDAVKRDLEVGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGTFAPGTRNR 499
Query: 311 TITMTGTPDAIALAQYLINMSV 332
+++TGTP+A++ AQYLI +
Sbjct: 500 IVSITGTPNAVSTAQYLIEQQI 521
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%)
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
P ++ + + +++ V ++GA++G GG + EI++ SGA I+ISK + +R
Sbjct: 440 PPSAADKCSDAVKRDLEVGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGTFAPGTRNR 499
Query: 756 TITMTGTPDAIALAQYLINMSV 777
+++TGTP+A++ AQYLI +
Sbjct: 500 IVSITGTPNAVSTAQYLIEQQI 521
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS----DSSTPERI 484
++ + Q +++++ ++ G IIGK G +K+++EESG+ + IS D + ER
Sbjct: 121 DFDHKQPAEREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERC 180
Query: 485 VTVIGSMDSLFRAFSLITKNIEE 507
+TVIG MD+ +A LI I E
Sbjct: 181 ITVIGEMDNNKKACQLILAKIVE 203
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 126
+ GNG +++VPA G+IIGKGG I +++ +GA V ++ D P +TER
Sbjct: 30 RRASGNG---TFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTER 86
Query: 127 EVNIKGVPDAVTQAIYQICLIMVDSPP 153
I G + V + I++ + + P
Sbjct: 87 VCLITGSVEGVLR-IHEFIMEKIKEKP 112
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 571
+ GNG +++VPA G+IIGKGG I +++ +GA V ++ D P +TER
Sbjct: 30 RRASGNG---TFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTER 86
Query: 572 EVNIKGVPDAVTQAIYQICLIMVDSPP 598
I G + V + I++ + + P
Sbjct: 87 VCLITGSVEGVLR-IHEFIMEKIKEKP 112
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
D ++ +++ Q+ ++ VPN G +IGKGG+ I +I++ SGA ++IS+ S++ +
Sbjct: 121 DFDHKQPAEREKQV--KILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALA- 177
Query: 309 DRTITMTGTPD 319
+R IT+ G D
Sbjct: 178 ERCITVIGEMD 188
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 694 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
D ++ +++ Q+ ++ VPN G +IGKGG+ I +I++ SGA ++IS+ S++ +
Sbjct: 121 DFDHKQPAEREKQV--KILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALA- 177
Query: 754 DRTITMTGTPD 764
+R IT+ G D
Sbjct: 178 ERCITVIGEMD 188
>gi|224922832|ref|NP_001028561.2| far upstream element (FUSE) binding protein 3 [Mus musculus]
gi|74198475|dbj|BAE39720.1| unnamed protein product [Mus musculus]
Length = 575
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 120
H +G S + +L ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHNDMDGNSTIQEL--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIM 148
P ++ + I G P V QA + I+
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 565
H +G S + +L ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHNDMDGNSTIQEL--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 566 PNSTEREVNIKGVPDAVTQAIYQICLIM 593
P ++ + I G P V QA + I+
Sbjct: 205 PTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAARIINELI--L 322
Query: 64 HKNQNKHLGG--------NGESQ--------LIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ + LGG G S + ++ VPA +CG +IGKGG IK+I +
Sbjct: 323 TAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 144
SGA V + + PN+ R I+G P + A + I
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARHLI 421
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAARIINELI--L 322
Query: 509 HKNQNKHLGG--------NGESQ--------LIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+ + LGG G S + ++ VPA +CG +IGKGG IK+I +
Sbjct: 323 TAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 589
SGA V + + PN+ R I+G P + A + I
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARHLI 421
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 317 TPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGL 367
TP++I A+ L+ V+ R NG G ++MD S+ L A GL
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGP-GFHNDMDGNSTIQELLIPASKVGL 176
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 762 TPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGL 812
TP++I A+ L+ V+ R NG G ++MD S+ L A GL
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGP-GFHNDMDGNSTIQELLIPASKVGL 176
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P + +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVAR 418
Query: 326 YLINMSV 332
+LI+ V
Sbjct: 419 HLIDEKV 425
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P + +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVAR 418
Query: 771 YLINMSV 777
+LI+ V
Sbjct: 419 HLIDEKV 425
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSL 500
++ +VG +IGK GET+K+L+E +G K + I D P ++ + + G + +A +
Sbjct: 168 LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREM 227
Query: 501 ITKNIEEFHKNQNKHLG---------GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+ + I E K+Q G G G ++ R +V G +IG+ G IK I+
Sbjct: 228 VLEIIRE--KDQADFRGVRSDFTSRAGGGSIEVSVPRFVV-----GIVIGRNGEMIKKIQ 280
Query: 552 ETSGASV-YVASDMLPNSTEREVNIKGVPDAVTQA 585
+G + + D + S ER + G PD A
Sbjct: 281 NDAGVRIQFKPDDGI--SPERAAQVMGPPDRCQHA 313
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 61/339 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAF 498
+R ++Q VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 123 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENCTNAC 182
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
I + +++ N NK GE I L+++ + G IIGKGG+ IK I + + +
Sbjct: 183 KKILEVMQQEANNTNK-----GE---ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKI 234
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V+S D+ + ER + +KG D +++A I + S PQ+ PG
Sbjct: 235 TVSSINDINSFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQA---MAPQSMMFPG 291
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
L +P+A ++ G+G +S G GL + A +
Sbjct: 292 L-------------------HPMAMMSTAGMGYSS---RGPGLYGSGPAPYPYQ----SS 325
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
+P Q P+ T Q T + +PN +GA+IG G+ I I + S
Sbjct: 326 LPTQQG------------VPASDT-----QETTFLYIPNNSVGAIIGTKGSHIRNIIRFS 368
Query: 737 GAMIRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 773
GA ++I+ +++ E +R +T+ G+P++ AQYLI
Sbjct: 369 GASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 407
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 61/335 (18%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAFSLIT 57
+Q VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A I
Sbjct: 127 VQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENCTNACKKIL 186
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
+ +++ N NK GE I L+++ + G IIGKGG+ IK I + + + V+S
Sbjct: 187 EVMQQEANNTNK-----GE---ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSS 238
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG D +++A I + S PQ+ PGL
Sbjct: 239 INDINSFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQA---MAPQSMMFPGL--- 292
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+P+A ++ G+G +S G GL + A + +P
Sbjct: 293 ----------------HPMAMMSTAGMGYSS---RGPGLYGSGPAPYPYQ----SSLPTQ 329
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
Q P+ T Q T + +PN +GA+IG G+ I I + SGA +
Sbjct: 330 QG------------VPASDT-----QETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASV 372
Query: 296 RISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 328
+I+ +++ E +R +T+ G+P++ AQYLI
Sbjct: 373 KIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 407
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 144/330 (43%), Gaps = 58/330 (17%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
N + +IT ++ N LIG +IGKGG I I + + I +S ++ + +R IT+
Sbjct: 195 NTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLERIITVK 254
Query: 316 GTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAA 375
G+ D ++ A+ +I+ LR S +N+L + AP
Sbjct: 255 GSIDNMSKAESMISSK---LRQ---------------SYENDLQAMAP------------ 284
Query: 376 ALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQG--PNYANI 433
Q + PG L+ + +S G +G S G G SG Q P +
Sbjct: 285 ------QSMMFPG-LHPMAMMSTAG-----MGYSSRGPGLYGSGPAPYPYQSSLPTQQGV 332
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVT 486
+ Q + VG+IIG G ++ + SG+ + I+ + P ER VT
Sbjct: 333 PASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVT 392
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
++GS +S ++A LI F K + + E + + ++VP++Q G IIGKGG
Sbjct: 393 IVGSPESQWKAQYLI------FEKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQN 446
Query: 547 IKTIRETSGASVYVASDM-LPNSTEREVNI 575
++ ++ +G+ + ++ P S E E +
Sbjct: 447 VRELQRVTGSVIKLSEQQATPPSAEEETTV 476
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ + P ER VT++GS +S ++A LI
Sbjct: 350 VGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI-- 407
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
F K + + E + + ++VP++Q G IIGKGG ++ ++ +G+ + ++
Sbjct: 408 ----FEKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQ 463
Query: 119 M-LPNSTEREVNI 130
P S E E +
Sbjct: 464 QATPPSAEEETTV 476
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 71 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 130
L G+G LR++V + G+IIG+ GS I+ I + + A V V S E+ + I
Sbjct: 112 LPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITI 171
Query: 131 KGVPDAVTQAIYQICLIM 148
G P+ T A +I +M
Sbjct: 172 YGNPENCTNACKKILEVM 189
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 516 LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNI 575
L G+G LR++V + G+IIG+ GS I+ I + + A V V S E+ + I
Sbjct: 112 LPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITI 171
Query: 576 KGVPDAVTQAIYQICLIM 593
G P+ T A +I +M
Sbjct: 172 YGNPENCTNACKKILEVM 189
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGS 545
L I + I E +N K + ++ Q+++IVP S G IIGKGG+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 546 QIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
+K I E SGA V ++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 169 TVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++L I + I
Sbjct: 62 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIR 121
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E +N K + ++ Q+++IVP S G IIGKGG+ +K I E SGA V
Sbjct: 122 EMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWV 181
Query: 114 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 182 QLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 460
Query: 325 QYLINMSV 332
QYLI +
Sbjct: 461 QYLITQRI 468
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 460
Query: 770 QYLINMSV 777
QYLI +
Sbjct: 461 QYLITQRI 468
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 250 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 309 DRTITMTGTPDAI 321
+R + GT +A+
Sbjct: 97 ERVCLIQGTVEAL 109
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 695 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 754 DRTITMTGTPDAI 766
+R + GT +A+
Sbjct: 97 ERVCLIQGTVEAL 109
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 132 GVPDAV 137
G +A+
Sbjct: 104 GTVEAL 109
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 577 GVPDAV 582
G +A+
Sbjct: 104 GTVEAL 109
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 140 AIYQIC 145
A Y I
Sbjct: 460 AQYLIT 465
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 585 AIYQIC 590
A Y I
Sbjct: 460 AQYLIT 465
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 16/177 (9%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFS 499
R + +G +IGK+G +K L++++G+K+ I D S +P+R++TVIG + FS
Sbjct: 38 FRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSAVVFS 97
Query: 500 LI------TKNIEEFHKNQNKHLGGNGESQ-----LIQLRLIVPASQCGSIIGKGGSQIK 548
I +K E + + L ES ++ R++ S G++IGKGG ++
Sbjct: 98 RIESAVEVSKGQEALVRVFERILEVAAESDSVADGVVSCRMLAEVSSVGAVIGKGGKVVE 157
Query: 549 TIRETSGASVYVASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 602
IR+ G + V D LP+ S E + I+G AV + + + + D P T
Sbjct: 158 KIRKDCGCRIKVLVDKLPDCAASNEEMIEIEGDVSAVKKGLVAVSRCLQDCQPVDKT 214
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLI-- 56
+G +IGK+G +K L++++G+K+ I D S +P+R++TVIG + FS I
Sbjct: 42 CHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSAVVFSRIES 101
Query: 57 ----TKNIEEFHKNQNKHLGGNGESQ-----LIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+K E + + L ES ++ R++ S G++IGKGG ++ IR+
Sbjct: 102 AVEVSKGQEALVRVFERILEVAAESDSVADGVVSCRMLAEVSSVGAVIGKGGKVVEKIRK 161
Query: 108 TSGASVYVASDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 157
G + V D LP+ S E + I+G AV + + + + D P T
Sbjct: 162 DCGCRIKVLVDKLPDCAASNEEMIEIEGDVSAVKKGLVAVSRCLQDCQPVDKT 214
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 144/344 (41%), Gaps = 54/344 (15%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRI-SKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 331
+GAVIGKGG + +IRK G I++ + SN+ I + G D A+ + L+ +S
Sbjct: 145 VGAVIGKGGKVVEKIRKDCGCRIKVLVDKLPDCAASNEEMIEIEG--DVSAVKKGLVAVS 202
Query: 332 --------VELLRA--NLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
V+ R + E ++ D + + SA L + ++ + +PQ +
Sbjct: 203 RCLQDCQPVDKTRVTNSKPAEAVSRVSLSDVRVEIHPRHSAVLPTIAQNSSVLPTIPQHS 262
Query: 382 Q-ILTKP-GALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQ 439
+ T P ++N + + L SD + + +PQ Q
Sbjct: 263 LGLPTIPKSSINYASRVHPLSLESDRVVTPDTN-----------IPQ------------Q 299
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRA 497
R + +G +IGK G V+ L+ E+G+ I + + S ER++TV S + R
Sbjct: 300 LVFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPESR- 358
Query: 498 FSLITKNI-----EEFHKNQNKHLG-GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+S K I K L G+ + RL+V SQ G ++GKGG+ I +R
Sbjct: 359 YSAAQKTIVLVFSRAVESGIEKGLDPGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEMR 418
Query: 552 ETSGASVYVA------SDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ + S+ + +P T+ V I G V AIY +
Sbjct: 419 KATSTSIRIIVGDQRNPKCVPE-TDHVVEISGDFVNVKDAIYHV 461
Score = 46.6 bits (109), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNI-- 60
+G +IGK G V+ L+ E+G+ I + + S ER++TV S + R +S K I
Sbjct: 310 RIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPESR-YSAAQKTIVL 368
Query: 61 ---EEFHKNQNKHLG-GNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
K L G+ + RL+V SQ G ++GKGG+ I +R+ + S+ +
Sbjct: 369 VFSRAVESGIEKGLDPGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRII 428
Query: 117 ------SDMLPNSTEREVNIKGVPDAVTQAIYQI 144
+P T+ V I G V AIY +
Sbjct: 429 VGDQRNPKCVPE-TDHVVEISGDFVNVKDAIYHV 461
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
T E+ VP G+V G+ G+ + +R+ISGA + + E ++DR + ++GTPD
Sbjct: 651 TVEIVVPENAFGSVYGENGSNLARLRQISGAKVIV---HEPRLGTSDRIVVISGTPDETQ 707
Query: 323 LAQYLI 328
AQ L+
Sbjct: 708 AAQSLL 713
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T E+ VP G+V G+ G+ + +R+ISGA + + E ++DR + ++GTPD
Sbjct: 651 TVEIVVPENAFGSVYGENGSNLARLRQISGAKVIV---HEPRLGTSDRIVVISGTPDETQ 707
Query: 768 LAQYLI 773
AQ L+
Sbjct: 708 AAQSLL 713
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 168/386 (43%), Gaps = 83/386 (21%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS------------------ 45
+GS+IGK G+ +K +R+E+ SKI ++D+ ER++ + S
Sbjct: 53 IGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENE 112
Query: 46 -----MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
D L R S+I + + +K + RL+V SQ GS+IGKGG+
Sbjct: 113 PVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDA-------RLLVANSQIGSLIGKGGN 165
Query: 101 QIKTIRETSGASVYVA-SDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 156
I+ +R SGA + + D LP S + V I G AV +A+Y + + PPK
Sbjct: 166 NIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPK-E 224
Query: 157 TIPYRP-LPQN-------AGGPGLI-GNQFGMQNSLMGAPDMGNNPLAGLAAL--GLGGN 205
IP+ LP+ +G P N +SL G ++ + P+ G A+ GLGG
Sbjct: 225 QIPWSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNL-SAPILGYASRLPGLGGY 283
Query: 206 -SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 264
S G L+ AL + + T T + + +
Sbjct: 284 GSEAGSAWPLSNPALPSFSKFGNST-------------------------TKKTSEEFSI 318
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
+ PN+ IG VIGKGG I +R +GA IR+ + E S++R I ++ T LA
Sbjct: 319 RVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTE---SDERVIVVSAT----ELA 371
Query: 325 QYLINMSVELLRANLNGEGGGESNMD 350
++ ++E + L G+ G ++ D
Sbjct: 372 DDRVSPTIEAVLL-LQGKTSGTTDKD 396
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 168/386 (43%), Gaps = 83/386 (21%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGS------------------ 490
+GS+IGK G+ +K +R+E+ SKI ++D+ ER++ + S
Sbjct: 53 IGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENE 112
Query: 491 -----MDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 545
D L R S+I + + +K + RL+V SQ GS+IGKGG+
Sbjct: 113 PVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDA-------RLLVANSQIGSLIGKGGN 165
Query: 546 QIKTIRETSGASVYVA-SDMLPN---STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
I+ +R SGA + + D LP S + V I G AV +A+Y + + PPK
Sbjct: 166 NIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPK-E 224
Query: 602 TIPYRP-LPQN-------AGGPGLI-GNQFGMQNSLMGAPDMGNNPLAGLAAL--GLGGN 650
IP+ LP+ +G P N +SL G ++ + P+ G A+ GLGG
Sbjct: 225 QIPWSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNL-SAPILGYASRLPGLGGY 283
Query: 651 -SGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK 709
S G L+ AL + + T T + + +
Sbjct: 284 GSEAGSAWPLSNPALPSFSKFGNST-------------------------TKKTSEEFSI 318
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
+ PN+ IG VIGKGG I +R +GA IR+ + E S++R I ++ T LA
Sbjct: 319 RVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTE---SDERVIVVSAT----ELA 371
Query: 770 QYLINMSVELLRANLNGEGGGESNMD 795
++ ++E + L G+ G ++ D
Sbjct: 372 DDRVSPTIEAVLL-LQGKTSGTTDKD 396
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 162/374 (43%), Gaps = 46/374 (12%)
Query: 213 GLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG-------PSQKTNQQQNQITKE 265
G++ + +S K + + N+N+ +DG Q+++ + N K+
Sbjct: 83 GVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKK 142
Query: 266 ------MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEE--EDSNDRTITMTGT 317
+ V N IG++IGKGG I ++R SGA I+I + E S D + ++G
Sbjct: 143 RPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISG- 201
Query: 318 PDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAAL 377
DA A+ + L +S L + +P S L N S+ + +
Sbjct: 202 -DAAAVKKALYAVSAFLFK---------------HPPKEQIPWSVILPETNQSSLPPSGV 245
Query: 378 PQL--AQILTKPGALNALTSLSA--LGGLSDL--LGGGSSGGGSGNSGGFGGVPQGPNYA 431
P A L + +L +LSA LG S L LGG S GS +P +
Sbjct: 246 PTFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPSFSKFG 305
Query: 432 NIQT--TGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP--ERIVTV 487
N T T + +R + ++G +IGK G T+K +R ++G+ I + D+ T ER++ V
Sbjct: 306 NSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVV 365
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
S L A ++ IE Q K G + I R +VP+ G ++GKGG+ I
Sbjct: 366 --SATEL--ADDRVSPTIEAVLLLQGKTSGTTDKDGAISTRFLVPSKHIGCLLGKGGNII 421
Query: 548 KTIRETSGASVYVA 561
+R S +++
Sbjct: 422 SEMRANSSKYSHIS 435
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 16 TVKKLREESGSKIYISDSSTP--ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGG 73
T+K +R ++G+ I + D+ T ER++ V S L A ++ IE Q K G
Sbjct: 337 TIKSMRNDTGASIRVEDAQTESDERVIVV--SATEL--ADDRVSPTIEAVLLLQGKTSGT 392
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
+ I R +VP+ G ++GKGG+ I +R S +++
Sbjct: 393 TDKDGAISTRFLVPSKHIGCLLGKGGNIISEMRANSSKYSHIS 435
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 134
R++ P++ GS+IGKGG IK++R+ + + + VA D +P ER + I P
Sbjct: 44 YRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVA-DAVPGVDERVIVIFSSP 95
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVP 579
R++ P++ GS+IGKGG IK++R+ + + + VA D +P ER + I P
Sbjct: 44 YRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVA-DAVPGVDERVIVIFSSP 95
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 88 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 147
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 120
H +G S + +L ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 148 RCRNGPGFHNDVDGSSTIQEL--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 205
Query: 121 PNSTEREVNIKGVPDAVTQA 140
P ++ + I G P V QA
Sbjct: 206 PTGADKPLRITGDPFKVQQA 225
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 88 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 147
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 565
H +G S + +L ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 148 RCRNGPGFHNDVDGSSTIQEL--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 205
Query: 566 PNSTEREVNIKGVPDAVTQA 585
P ++ + I G P V QA
Sbjct: 206 PTGADKPLRITGDPFKVQQA 225
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 266 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVINELILTA 325
Query: 64 HKNQ----------------NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ + +G G Q ++ VPA +CG +IGKGG IK+I +
Sbjct: 326 QERDGFGGLAVARGRGRGRGDWSVGTPGGVQ--EITYTVPADKCGLVIGKGGENIKSINQ 383
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 144
SGA V + + PN+ R I+G+P + A + I
Sbjct: 384 QSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI 422
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 266 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHVINELILTA 325
Query: 509 HKNQ----------------NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+ + +G G Q ++ VPA +CG +IGKGG IK+I +
Sbjct: 326 QERDGFGGLAVARGRGRGRGDWSVGTPGGVQ--EITYTVPADKCGLVIGKGGENIKSINQ 383
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 589
SGA V + + PN+ R I+G+P + A + I
Sbjct: 384 QSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLI 422
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSL 500
++ +VG +IGK GET+K+L+E +G K + I D P ++ + + G + +A +
Sbjct: 169 LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREM 228
Query: 501 ITKNIEEFHKNQNKHLGGNGESQL--IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+ + I E + + + G+ S++ L + VP G +IG+ G IK I+ +G +
Sbjct: 229 VLEIIREKDQADFRGVRGDFSSRMGGGSLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI 288
Query: 559 -YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ D + S ER + G PD A + I
Sbjct: 289 QFKPDDGI--SPERAAQVMGPPDRCQHAAHVI 318
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 74 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 130
Query: 317 TPDAIALAQYLINMSVELLRANLNGEG 343
TP++I A+ L+ V+ R NG G
Sbjct: 131 TPESIEQAKRLLGQIVDRCR---NGPG 154
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 74 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 130
Query: 762 TPDAIALAQYLINMSVELLRANLNGEG 788
TP++I A+ L+ V+ R NG G
Sbjct: 131 TPESIEQAKRLLGQIVDRCR---NGPG 154
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P I +A+
Sbjct: 360 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVAR 419
Query: 326 YLINMSV 332
+LI+ V
Sbjct: 420 HLIDEKV 426
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P I +A+
Sbjct: 360 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVAR 419
Query: 771 YLINMSV 777
+LI+ V
Sbjct: 420 HLIDEKV 426
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 155/339 (45%), Gaps = 61/339 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSST---PERIVTVIGSMDSLFRAF 498
+R ++Q + VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCTNA- 247
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
K I E + + L GE I LR++ + G IIGKGG+ IK I + + +
Sbjct: 248 ---CKKIMEVTQQEAYGL-SKGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKI 300
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
V+S D+ + ER + +KG D +++A I + S PQ+ PG
Sbjct: 301 TVSSINDINNFNLERIITVKGSIDNMSKAESMISNKLRQSYENDLQA---MAPQSLMFPG 357
Query: 617 LIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH 676
L +P+A ++ G+G +S G G A AS
Sbjct: 358 L-------------------HPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQAS------- 391
Query: 677 MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKIS 736
+P Q P T Q T + +PN +GA+IG G+ I I + S
Sbjct: 392 LPTQQGI------------PIGDT-----QETAFLYIPNTSVGAIIGSKGSHIRNIIRFS 434
Query: 737 GAMIRISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 773
GA ++I+ +++ + NDR +T+ G+P++ AQYLI
Sbjct: 435 GASVKIAPIEQDKPVDQQNDRKVTIVGSPESQWKAQYLI 473
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 152/335 (45%), Gaps = 61/335 (18%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSST---PERIVTVIGSMDSLFRAFSLIT 57
+Q + VG+IIG+ G T++++ + + +++ + + E+ +T+ G+ ++ A
Sbjct: 193 VQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCTNA----C 248
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
K I E + + L GE I LR++ + G IIGKGG+ IK I + + + V+S
Sbjct: 249 KKIMEVTQQEAYGLS-KGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSS 304
Query: 118 --DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGN 175
D+ + ER + +KG D +++A I + S PQ+ PGL
Sbjct: 305 INDINNFNLERIITVKGSIDNMSKAESMISNKLRQSYENDLQA---MAPQSLMFPGL--- 358
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
+P+A ++ G+G +S G G A AS +P
Sbjct: 359 ----------------HPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQAS-------LPTQ 395
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
Q P T Q T + +PN +GA+IG G+ I I + SGA +
Sbjct: 396 QGI------------PIGDT-----QETAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASV 438
Query: 296 RISKSSEEE--EDSNDRTITMTGTPDAIALAQYLI 328
+I+ +++ + NDR +T+ G+P++ AQYLI
Sbjct: 439 KIAPIEQDKPVDQQNDRKVTIVGSPESQWKAQYLI 473
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 57/307 (18%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+I+ + N LIG +IGKGGT I +I + + I +S ++ + +R IT+ G+ D
Sbjct: 266 EISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNLERIITVKGSIDN 325
Query: 321 IALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQL 380
++ A+ +I SN S +N+L + AP
Sbjct: 326 MSKAESMI------------------SNKLRQSYENDLQAMAP----------------- 350
Query: 381 AQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQG--PNYANIQTTGV 438
Q L PG L+ + +S G +G S G G SG Q P I
Sbjct: 351 -QSLMFPG-LHPMAMMSTAG-----MGYSSRGPGLYGSGPAPYPYQASLPTQQGIPIGDT 403
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSM 491
Q + VG+IIG G ++ + SG+ + I+ + P +R VT++GS
Sbjct: 404 QETAFLYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGSP 463
Query: 492 DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIR 551
+S ++A LI F K + + E + + ++VP++Q G IIGKGG ++ ++
Sbjct: 464 ESQWKAQYLI------FEKMREEGFVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQ 517
Query: 552 ETSGASV 558
+G+ +
Sbjct: 518 RVTGSII 524
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 13/115 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTP-----ERIVTVIGSMDSLFRAFSLITK 58
VG+IIG G ++ + SG+ + I+ + P +R VT++GS +S ++A LI
Sbjct: 416 VGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGSPESQWKAQYLI-- 473
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
F K + + E + + ++VP++Q G IIGKGG ++ ++ +G+ +
Sbjct: 474 ----FEKMREEGFVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSII 524
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 108
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGS 545
L I + I E +N K + ++ Q+++IVP S G IIGKGG+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 546 QIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
+K I E SGA V ++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 169 TVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++L I + I
Sbjct: 62 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIR 121
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E +N K + ++ Q+++IVP S G IIGKGG+ +K I E SGA V
Sbjct: 122 EMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWV 181
Query: 114 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 182 QLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 460
Query: 325 QYLINMSV 332
QYLI +
Sbjct: 461 QYLITQRI 468
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 460
Query: 770 QYLINMSV 777
QYLI +
Sbjct: 461 QYLITQRI 468
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 250 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 309 DRTITMTGTPDAI 321
+R + GT +A+
Sbjct: 97 ERVCLIQGTIEAL 109
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 695 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 754 DRTITMTGTPDAI 766
+R + GT +A+
Sbjct: 97 ERVCLIQGTIEAL 109
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 132 GVPDAV 137
G +A+
Sbjct: 104 GTIEAL 109
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 577 GVPDAV 582
G +A+
Sbjct: 104 GTIEAL 109
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 140 AIYQIC 145
A Y I
Sbjct: 460 AQYLIT 465
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 585 AIYQIC 590
A Y I
Sbjct: 460 AQYLIT 465
>gi|146197811|dbj|BAF57621.1| poly(rC)-binding protein [Dugesia japonica]
Length = 175
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
Q+ KE + N++IG +IG+GGT I EIR +SGA I+IS EE S +R IT++GTP++
Sbjct: 27 QLVKEFNITNDMIGCIIGRGGTTINEIRSLSGAQIKISYC---EEKSTERQITISGTPES 83
Query: 321 IALAQYLINMSVELLRANLNGEG----GGESNMDDFSSDNNLPSSAPLAGLNASNPLAAA 376
I A+ LIN +++ ++ N+DD + + AP++ SN + +
Sbjct: 84 INTAEMLINANIKSFMNSITSSKTKTVSQTPNVDDHQPIISYSNCAPISTCQNSNSVISN 143
Query: 377 LPQLAQILTK 386
+++ L K
Sbjct: 144 TNSVSKHLCK 153
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 765
Q+ KE + N++IG +IG+GGT I EIR +SGA I+IS EE S +R IT++GTP++
Sbjct: 27 QLVKEFNITNDMIGCIIGRGGTTINEIRSLSGAQIKISYC---EEKSTERQITISGTPES 83
Query: 766 IALAQYLINMSVELLRANLNGEG----GGESNMDDFSSDNNLPSSAPLAGLNASNPLAAA 821
I A+ LIN +++ ++ N+DD + + AP++ SN + +
Sbjct: 84 INTAEMLINANIKSFMNSITSSKTKTVSQTPNVDDHQPIISYSNCAPISTCQNSNSVISN 143
Query: 822 LPQLAQILTK 831
+++ L K
Sbjct: 144 TNSVSKHLCK 153
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 92 GSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
G IIG+GG+ I IR SGA + + S STER++ I G P+++ A
Sbjct: 40 GCIIGRGGTTINEIRSLSGAQIKI-SYCEEKSTERQITISGTPESINTA 87
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 537 GSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
G IIG+GG+ I IR SGA + + S STER++ I G P+++ A
Sbjct: 40 GCIIGRGGTTINEIRSLSGAQIKI-SYCEEKSTERQITISGTPESINTA 87
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 137/312 (43%), Gaps = 39/312 (12%)
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
N L+G +IGK G + +I + +G I IS + + +RTIT+ G+ +A + AQ I
Sbjct: 204 NSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGSTEACSKAQVEI- 262
Query: 330 MSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGA 389
++ LR E+ +D + N + P LNA + L L + PGA
Sbjct: 263 --MKKLR---------EAYENDVVAVNQQANLIPGLNLNALGIFSTGLSMLP---STPGA 308
Query: 390 --LNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQ 447
A T S L G G P G + + Q + +
Sbjct: 309 RGAAAATPYHPFASSSAYL------------SGLYGAPPGSAFPHQHPLPEQEVVNLFIP 356
Query: 448 GKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKN 504
+ VG+IIGK G+ +K+L +G+ I I+ + P ER+V + G ++ F+A I
Sbjct: 357 TQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFKAQGRI--- 413
Query: 505 IEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM 564
F K + ++ E ++ + VP+ G +IGKGG + ++ + A V V D
Sbjct: 414 ---FGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVIVPRDQ 470
Query: 565 LPNSTEREVNIK 576
P+ E EV +K
Sbjct: 471 TPDENE-EVIVK 481
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L +G+ I I+ + P ER+V + G ++ F+A I
Sbjct: 360 VGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFKAQGRI------ 413
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + ++ E ++ + VP+ G +IGKGG + ++ + A V V D P+
Sbjct: 414 FGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 473
Query: 123 STEREVNIK 131
E EV +K
Sbjct: 474 ENE-EVIVK 481
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T+K L +++ SK+ I ++ E+ +T+ + + A
Sbjct: 117 LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCSEAC 176
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I ++ K ++ I L+++ S G +IGK G +K I + +G +
Sbjct: 177 RMILDIMQ-------KEADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKI 229
Query: 559 YVA--SDMLPNSTEREVNIKGVPDAVTQAIYQI 589
++ D+ + ER + +KG +A ++A +I
Sbjct: 230 TISPLQDLTIYNPERTITVKGSTEACSKAQVEI 262
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T+K L +++ SK+ I ++ E+ +T+ + + A +I ++
Sbjct: 126 VGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCSEACRMILDIMQ- 184
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDML 120
K ++ I L+++ S G +IGK G +K I + +G + ++ D+
Sbjct: 185 ------KEADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLT 238
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
+ ER + +KG +A ++A +I
Sbjct: 239 IYNPERTITVKGSTEACSKAQVEI 262
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 84 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
L +P G+IIGK G IK + +GAS+ +A P+++ER V I G P+A +A
Sbjct: 353 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFKA 409
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 529 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
L +P G+IIGK G IK + +GAS+ +A P+++ER V I G P+A +A
Sbjct: 353 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFKA 409
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ +++G+KI IS PER +TV GS ++ +A I K +
Sbjct: 207 VGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGSTEACSKAQVEIMKKL 266
Query: 61 EEFHKN 66
E ++N
Sbjct: 267 REAYEN 272
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
+ +P + +GA+IGK G I ++ + +GA I+I+ + E D+++R + +TG P+A AQ
Sbjct: 353 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPA--EGPDASERMVIITGPPEAQFKAQ 410
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
LR++VP G+IIGK G IK + + + + V + + E+ + I P+ ++A
Sbjct: 117 LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCSEAC 176
Query: 142 YQICLIM---VDSPPKGATIPYRPLPQNAGGPGLIGNQ 176
I IM D IP + L N+ LIG +
Sbjct: 177 RMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKE 214
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 586
LR++VP G+IIGK G IK + + + + V + + E+ + I P+ ++A
Sbjct: 117 LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCSEAC 176
Query: 587 YQICLIM---VDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
I IM D IP + L N+ LIG +
Sbjct: 177 RMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKE 214
>gi|147902659|ref|NP_001083916.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|25992561|gb|AAN77160.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|213625145|gb|AAI69923.1| RNA-binding protein VgRBP71 [Xenopus laevis]
Length = 672
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 22/156 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI--- 60
VG IIG+ GE + K+++ESG K+ IS S PERIV++ G+ D++ +A L+ +
Sbjct: 105 VGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERIVSLTGNPDAVQKAKMLLDDIVLRG 164
Query: 61 -----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+FH + N G NG Q I ++PA + G IIGKGG IK ++E +G + +
Sbjct: 165 RGGPPSQFHDSSN---GQNGSLQEI----MIPAGKAGLIIGKGGETIKQLQERAGVKMIL 217
Query: 116 ASDMLPNST-EREVNIKGVPDAVTQAIYQICLIMVD 150
D N+ ++ + I G P V QA C +++D
Sbjct: 218 IQDGSQNTNMDKPLRIVGEPFKVQQA----CEMVMD 249
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 22/156 (14%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI--- 505
VG IIG+ GE + K+++ESG K+ IS S PERIV++ G+ D++ +A L+ +
Sbjct: 105 VGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERIVSLTGNPDAVQKAKMLLDDIVLRG 164
Query: 506 -----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+FH + N G NG Q I ++PA + G IIGKGG IK ++E +G + +
Sbjct: 165 RGGPPSQFHDSSN---GQNGSLQEI----MIPAGKAGLIIGKGGETIKQLQERAGVKMIL 217
Query: 561 ASDMLPNST-EREVNIKGVPDAVTQAIYQICLIMVD 595
D N+ ++ + I G P V QA C +++D
Sbjct: 218 IQDGSQNTNMDKPLRIVGEPFKVQQA----CEMVMD 249
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+SG+ +KK++ ++G +I D + P++I ++G D A S+I+ ++
Sbjct: 288 VGVVIGRSGDMIKKIQNDAGVRIQFKQDDGTGPDKIAHIMGPPDRCEHAASIISDLLQSL 347
Query: 64 H--------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
G ++ +P +CG +IG+GG +K I + +
Sbjct: 348 RTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQT 407
Query: 110 GASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
GA V ++ PN + I+G P + A
Sbjct: 408 GAFVEISRQPPPNGDPNFKMFIIRGNPQQIDHA 440
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+SG+ +KK++ ++G +I D + P++I ++G D A S+I+ ++
Sbjct: 288 VGVVIGRSGDMIKKIQNDAGVRIQFKQDDGTGPDKIAHIMGPPDRCEHAASIISDLLQSL 347
Query: 509 H--------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
G ++ +P +CG +IG+GG +K I + +
Sbjct: 348 RTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQT 407
Query: 555 GASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
GA V ++ PN + I+G P + A
Sbjct: 408 GAFVEISRQPPPNGDPNFKMFIIRGNPQQIDHA 440
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R +++TG PDA+
Sbjct: 94 MTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDS---GGMPERIVSLTGNPDAV 150
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 357
A+ L++ V L G GG S D S+ N
Sbjct: 151 QKAKMLLDDIV------LRGRGGPPSQFHDSSNGQN 180
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R +++TG PDA+
Sbjct: 94 MTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDS---GGMPERIVSLTGNPDAV 150
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 802
A+ L++ V L G GG S D S+ N
Sbjct: 151 QKAKMLLDDIV------LRGRGGPPSQFHDSSNGQN 180
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G IIGK GET+K+L+E +G K+ + S ++ ++ + ++G + +A ++ +
Sbjct: 192 KAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLL 251
Query: 61 EE-----FHKNQN-KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
+E F +N+ GG G + + VP G +IG+ G IK I+ +G +
Sbjct: 252 KERDQPNFDRNEYGTRGGGGGGGGGGGIDVPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQ 311
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQA 140
D ++ +I G PD A
Sbjct: 312 FKQDDG-TGPDKIAHIMGPPDRCEHA 336
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITKNI 505
+ G IIGK GET+K+L+E +G K+ + S ++ ++ + ++G + +A ++ +
Sbjct: 192 KAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLL 251
Query: 506 EE-----FHKNQN-KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
+E F +N+ GG G + + VP G +IG+ G IK I+ +G +
Sbjct: 252 KERDQPNFDRNEYGTRGGGGGGGGGGGIDVPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQ 311
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQA 585
D ++ +I G PD A
Sbjct: 312 FKQDDG-TGPDKIAHIMGPPDRCEHA 336
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 265 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
EMT +P G VIG+GG + I + +GA + IS+ D N + + G P I
Sbjct: 379 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFIIRGNPQQID 438
Query: 323 LAQYLINMSVE 333
A+ LI +E
Sbjct: 439 HAKQLIEEKIE 449
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 710 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
EMT +P G VIG+GG + I + +GA + IS+ D N + + G P I
Sbjct: 379 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFIIRGNPQQID 438
Query: 768 LAQYLINMSVE 778
A+ LI +E
Sbjct: 439 HAKQLIEEKIE 449
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP G IIG+GG QI I++ SG V ++ D +P ER V++ G PDAV +A
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP---ERIVSLTGNPDAVQKA 153
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 585
VP G IIG+GG QI I++ SG V ++ D +P ER V++ G PDAV +A
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP---ERIVSLTGNPDAVQKA 153
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 132 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 191
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 192 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 251
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 252 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 301
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 142 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 201
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 202 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 261
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 262 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 301
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 11/98 (11%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A
Sbjct: 507 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPTNTQAA 566
Query: 325 QYLINMSV-----------ELLRANLNGEGGGESNMDD 351
QYLI+ V E+ +L+ + GG+ + D
Sbjct: 567 QYLISQRVFQTLLFSMALGEIQPPHLSPKKGGKKSHRD 604
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 11/98 (11%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A
Sbjct: 507 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPTNTQAA 566
Query: 770 QYLINMSV-----------ELLRANLNGEGGGESNMDD 796
QYLI+ V E+ +L+ + GG+ + D
Sbjct: 567 QYLISQRVFQTLLFSMALGEIQPPHLSPKKGGKKSHRD 604
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 132 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN- 190
Query: 140 AIYQICLIMVDSPPKGATIP 159
A++ V P+ T P
Sbjct: 191 AVHSFIAEKVREIPQAMTKP 210
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 584
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 132 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN- 190
Query: 585 AIYQICLIMVDSPPKGATIP 604
A++ V P+ T P
Sbjct: 191 AVHSFIAEKVREIPQAMTKP 210
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 133 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 192
Query: 325 QYLINMSVE 333
I V
Sbjct: 193 HSFIAEKVR 201
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 133 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 192
Query: 770 QYLINMSVE 778
I V
Sbjct: 193 HSFIAEKVR 201
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGSMDSLF 495
++ + I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G + +
Sbjct: 228 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 287
Query: 496 RAFSLITKNIEE 507
+A S I + ++E
Sbjct: 288 KAVSAIVQKVQE 299
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 39/226 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R++ +++GSIIG+ GE VK+LR ++ +KI I ++ ER+VTV
Sbjct: 51 YRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFED 110
Query: 490 -------SMDSLFRAFSLIT----KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGS 538
+MD+L R + + +E+ + K GG+ L+ +L+V + Q G
Sbjct: 111 SGEFMCPAMDALVRIHQKVIAEDLRGVEDEDVDMEKVDGGD----LVTAKLLVASDQIGC 166
Query: 539 IIGKGGSQIKTIRETSGASVYV-ASDMLP----NSTEREVNIKGVPDAVTQAIYQICLIM 593
+IGKGG ++ IR +GA + + D LP NS E V I G V +A+ Q+ +
Sbjct: 167 VIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDEL-VQISGEIAVVKKALIQVAARL 225
Query: 594 VDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPL 639
D+P + + + PG+ M S GAP MG P+
Sbjct: 226 HDNPSRTQHL------LTSAVPGVYAASGSMVGSHGGAPIMGMAPI 265
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 39/219 (17%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------------- 44
+++GSIIG+ GE VK+LR ++ +KI I ++ ER+VTV
Sbjct: 58 RKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCP 117
Query: 45 SMDSLFRAFSLIT----KNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
+MD+L R + + +E+ + K GG+ L+ +L+V + Q G +IGKGG
Sbjct: 118 AMDALVRIHQKVIAEDLRGVEDEDVDMEKVDGGD----LVTAKLLVASDQIGCVIGKGGQ 173
Query: 101 QIKTIRETSGASVYV-ASDMLP----NSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKG 155
++ IR +GA + + D LP NS E V I G V +A+ Q+ + D+P +
Sbjct: 174 IVQNIRSETGAQIRILKDDRLPLCALNSDEL-VQISGEIAVVKKALIQVAARLHDNPSRT 232
Query: 156 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPL 194
+ + PG+ M S GAP MG P+
Sbjct: 233 QHL------LTSAVPGVYAASGSMVGSHGGAPIMGMAPI 265
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGS 545
L I + I E +N K + ++ Q+++IVP S G IIGKGG+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 546 QIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
+K I E SGA V ++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 169 TVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++L I + I
Sbjct: 62 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIR 121
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E +N K + ++ Q+++IVP S G IIGKGG+ +K I E SGA V
Sbjct: 122 EMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWV 181
Query: 114 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 182 QLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 460
Query: 325 QYLINMSV 332
QYLI +
Sbjct: 461 QYLITQRI 468
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 460
Query: 770 QYLINMSV 777
QYLI +
Sbjct: 461 QYLITQRI 468
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 250 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 309 DRTITMTGTPDAI 321
+R + GT +A+
Sbjct: 97 ERVCLIQGTVEAL 109
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 695 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 754 DRTITMTGTPDAI 766
+R + GT +A+
Sbjct: 97 ERVCLIQGTVEAL 109
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 132 GVPDAV 137
G +A+
Sbjct: 104 GTVEAL 109
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 577 GVPDAV 582
G +A+
Sbjct: 104 GTVEAL 109
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 140 AIYQIC 145
A Y I
Sbjct: 460 AQYLIT 465
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 585 AIYQIC 590
A Y I
Sbjct: 460 AQYLIT 465
>gi|17550876|ref|NP_510825.1| Protein C36E6.1, isoform b [Caenorhabditis elegans]
gi|351059040|emb|CCD66899.1| Protein C36E6.1, isoform b [Caenorhabditis elegans]
Length = 641
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+I+G G+ +KKL +E+G+KI P ER + +IG+ + ++ LI +E
Sbjct: 257 VGAIMGLQGKNIKKLSDETGTKIQFLPDDDPKLMERSLAIIGNKNKVYVCAQLIKAIVEA 316
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+ N + ++ +++PAS+CG +IG+GG IK I + SGA ++ D N
Sbjct: 317 NSEAAN--------APVVLFYMVIPASKCGLVIGRGGETIKQINQESGAHCELSRDPNTN 368
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
E+ I+G V A + I + + D PP PY P
Sbjct: 369 PIEKTFVIRGSEAQVEHAKHLIRVKVGDIPP---NTPYTP 405
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 507
VG+I+G G+ +KKL +E+G+KI P ER + +IG+ + ++ LI +E
Sbjct: 257 VGAIMGLQGKNIKKLSDETGTKIQFLPDDDPKLMERSLAIIGNKNKVYVCAQLIKAIVEA 316
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
+ N + ++ +++PAS+CG +IG+GG IK I + SGA ++ D N
Sbjct: 317 NSEAAN--------APVVLFYMVIPASKCGLVIGRGGETIKQINQESGAHCELSRDPNTN 368
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
E+ I+G V A + I + + D PP PY P
Sbjct: 369 PIEKTFVIRGSEAQVEHAKHLIRVKVGDIPP---NTPYTP 405
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 81/161 (50%), Gaps = 22/161 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFSLITKNIEE- 62
VG +IG++G V+ + ++SG ++ ++ SST R+V + G +++ RA + I++ +
Sbjct: 66 VGLVIGRNGAEVQAISQKSGCRVQVTVQPSSTGFRLVEIYGIPENIERAKAYISEVVTRG 125
Query: 63 -----------FHKNQN---KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 108
H + + G+ I + + +PA++CG+IIGKGG Q++ +R
Sbjct: 126 TRQPGPLCQPVVHVQTHGIKSPVVDQGDPSKITIEIPIPANKCGAIIGKGGEQMRKLRSW 185
Query: 109 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV 149
+ +V + D T + + I G P V Q C ++V
Sbjct: 186 TNCNVQLLQDNNIADTVKPLKITGDPKQVEQ-----CRLLV 221
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 81/161 (50%), Gaps = 22/161 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFSLITKNIEE- 507
VG +IG++G V+ + ++SG ++ ++ SST R+V + G +++ RA + I++ +
Sbjct: 66 VGLVIGRNGAEVQAISQKSGCRVQVTVQPSSTGFRLVEIYGIPENIERAKAYISEVVTRG 125
Query: 508 -----------FHKNQN---KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 553
H + + G+ I + + +PA++CG+IIGKGG Q++ +R
Sbjct: 126 TRQPGPLCQPVVHVQTHGIKSPVVDQGDPSKITIEIPIPANKCGAIIGKGGEQMRKLRSW 185
Query: 554 SGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV 594
+ +V + D T + + I G P V Q C ++V
Sbjct: 186 TNCNVQLLQDNNIADTVKPLKITGDPKQVEQ-----CRLLV 221
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIY------ISDSSTPERIVTVIGSMDSLFRAFSLITK 58
+ G+IIGK GE ++KLR + + I+D+ P +I ++ L+
Sbjct: 167 KCGAIIGKGGEQMRKLRSWTNCNVQLLQDNNIADTVKPLKITGDPKQVEQC----RLLVA 222
Query: 59 NIEEFHKNQ--NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
+I + + + + GNG + L++ VP G+I+G G IK + + +G +
Sbjct: 223 DILACNDDTPASAMMAGNGPVATMSLQVKVPRCTVGAIMGLQGKNIKKLSDETGTKIQFL 282
Query: 117 SDMLPNSTEREVNIKG 132
D P ER + I G
Sbjct: 283 PDDDPKLMERSLAIIG 298
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIY------ISDSSTPERIVTVIGSMDSLFRAFSLITK 503
+ G+IIGK GE ++KLR + + I+D+ P +I ++ L+
Sbjct: 167 KCGAIIGKGGEQMRKLRSWTNCNVQLLQDNNIADTVKPLKITGDPKQVEQC----RLLVA 222
Query: 504 NIEEFHKNQ--NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+I + + + + GNG + L++ VP G+I+G G IK + + +G +
Sbjct: 223 DILACNDDTPASAMMAGNGPVATMSLQVKVPRCTVGAIMGLQGKNIKKLSDETGTKIQFL 282
Query: 562 SDMLPNSTEREVNIKG 577
D P ER + I G
Sbjct: 283 PDDDPKLMERSLAIIG 298
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 19/187 (10%)
Query: 427 GPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TP 481
GPN I+ + ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T
Sbjct: 126 GPNL-QIRAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 184
Query: 482 ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPA 533
ER+ V G+ ++L S I + + E + K N + Q +LIVP
Sbjct: 185 ERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPN 244
Query: 534 SQCGSIIGKGGSQIKTIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQIC 590
S G IIGKGG+ +K + E SGA V ++ P N ER V + G P+ V +A+ I
Sbjct: 245 STAGLIIGKGGATVKAVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIV 302
Query: 591 LIMVDSP 597
+ + P
Sbjct: 303 QKVQEDP 309
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 150 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 209
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 210 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 269
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 270 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 309
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 515 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 574
Query: 325 QYLINMSV 332
QYLI+ V
Sbjct: 575 QYLISQRV 582
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 515 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 574
Query: 770 QYLINMSV 777
QYLI+ V
Sbjct: 575 QYLISQRV 582
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 303
R + GP+ + ++ + ++ +P+ G++IGKGG I +++K +GA I++SKS +
Sbjct: 120 ERTDTSGPNLQIRAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 179
Query: 304 EEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+ +R + GT +A+ I V
Sbjct: 180 YPGTTERVCLVQGTAEALNAVHSFIAEKVR 209
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%)
Query: 689 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE 748
R + GP+ + ++ + ++ +P+ G++IGKGG I +++K +GA I++SKS +
Sbjct: 120 ERTDTSGPNLQIRAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 179
Query: 749 EEDSNDRTITMTGTPDAIALAQYLINMSVE 778
+ +R + GT +A+ I V
Sbjct: 180 YPGTTERVCLVQGTAEALNAVHSFIAEKVR 209
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 140 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN- 198
Query: 140 AIYQICLIMVDSPPKGATIP 159
A++ V P+ T P
Sbjct: 199 AVHSFIAEKVREIPQAMTKP 218
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 126
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 503 EKLAAESAKELVEI--AVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 560
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G P A A Y I
Sbjct: 561 RVTITGSPAATQAAQYLI 578
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 571
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 503 EKLAAESAKELVEI--AVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 560
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G P A A Y I
Sbjct: 561 RVTITGSPAATQAAQYLI 578
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 107
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGS 545
L I + I E +N K + ++ Q+++IVP S G IIGKGG+
Sbjct: 108 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 167
Query: 546 QIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
+K I E SGA V ++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 168 TVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 226
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++L I + I
Sbjct: 61 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIR 120
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E +N K + ++ Q+++IVP S G IIGKGG+ +K I E SGA V
Sbjct: 121 EMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWV 180
Query: 114 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 181 QLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 400 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 459
Query: 325 QYLINMSV 332
QYLI +
Sbjct: 460 QYLITQRI 467
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 400 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 459
Query: 770 QYLINMSV 777
QYLI +
Sbjct: 460 QYLITQRI 467
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 250 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 36 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 95
Query: 309 DRTITMTGTPDAI 321
+R + GT +A+
Sbjct: 96 ERVCLIQGTIEAL 108
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 695 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 36 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 95
Query: 754 DRTITMTGTPDAI 766
+R + GT +A+
Sbjct: 96 ERVCLIQGTIEAL 108
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 43 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 102
Query: 132 GVPDAV 137
G +A+
Sbjct: 103 GTIEAL 108
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 43 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 102
Query: 577 GVPDAV 582
G +A+
Sbjct: 103 GTIEAL 108
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 140 AIYQIC 145
A Y I
Sbjct: 459 AQYLIT 464
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 585 AIYQIC 590
A Y I
Sbjct: 459 AQYLIT 464
>gi|344300282|gb|EGW30622.1| hypothetical protein SPAPADRAFT_63451 [Spathaspora passalidarum
NRRL Y-27907]
Length = 374
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 11/162 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFS 499
+R ++ KE G +IG++G+ + +R+E+ +K IS + ERI+TV G +D+ +A S
Sbjct: 83 VRVLVSAKEAGCLIGQNGKVIDGIRDETNTKAGISRLQPGSHERILTVSGKLDNCAKALS 142
Query: 500 -----LITKNIEEFHKNQNKHLGGNG--ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
L IE ++ K L N E++ LRL+VP +Q G++IG G +I+ I+
Sbjct: 143 YFAQALCDSTIETYNYFPLKQLSANPCIENETTILRLLVPNAQMGTLIGSKGLRIQQIQS 202
Query: 553 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLI 592
S+ + LP S ER V ++G + + A+ I CLI
Sbjct: 203 NYHISMIASKSFLPGSNERLVELQGTVNDLYDALRIIARCLI 244
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 138/289 (47%), Gaps = 42/289 (14%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 133
NG++ +I +R++V A + G +IG+ G I IR+ + + S + P S ER + + G
Sbjct: 76 NGDA-VINVRVLVSAKEAGCLIGQNGKVIDGIRDETNTKAGI-SRLQPGSHERILTVSGK 133
Query: 134 PDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMG--- 190
D +A+ + DS + T Y PL Q + P I N+ + L+ MG
Sbjct: 134 LDNCAKALSYFAQALCDSTIE--TYNYFPLKQLSANP-CIENETTILRLLVPNAQMGTLI 190
Query: 191 ------------NNPLAGLAALGL--GGNSG-GGMGGGLN--AAALAALASSQLK----- 228
N ++ +A+ G N + G +N AL +A ++
Sbjct: 191 GSKGLRIQQIQSNYHISMIASKSFLPGSNERLVELQGTVNDLYDALRIIARCLIEDISAL 250
Query: 229 --TNH-MPRNQNQNQNQHNRNNRDGPSQKTN-----QQQNQI-TKEMTVPNELIGAVIGK 279
TN+ +PR + N N N + TN ++ + I T ++ PN+++GA+IGK
Sbjct: 251 GNTNYYVPRGHHSQYNGVNTTNGVSSTTPTNGRNFARKSSHIATTSLSFPNDIVGALIGK 310
Query: 280 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
G++I +RK+SGA I I SEE E N+R T++G+P A+ A+ L+
Sbjct: 311 NGSRIQGVRKVSGATIGI---SEEVEGKNERIFTISGSPHAVEKAKGLL 356
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 138/289 (47%), Gaps = 42/289 (14%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGV 578
NG++ +I +R++V A + G +IG+ G I IR+ + + S + P S ER + + G
Sbjct: 76 NGDA-VINVRVLVSAKEAGCLIGQNGKVIDGIRDETNTKAGI-SRLQPGSHERILTVSGK 133
Query: 579 PDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMG--- 635
D +A+ + DS + T Y PL Q + P I N+ + L+ MG
Sbjct: 134 LDNCAKALSYFAQALCDSTIE--TYNYFPLKQLSANP-CIENETTILRLLVPNAQMGTLI 190
Query: 636 ------------NNPLAGLAALGL--GGNSG-GGMGGGLN--AAALAALASSQLK----- 673
N ++ +A+ G N + G +N AL +A ++
Sbjct: 191 GSKGLRIQQIQSNYHISMIASKSFLPGSNERLVELQGTVNDLYDALRIIARCLIEDISAL 250
Query: 674 --TNH-MPRNQNQNQNQHNRNNRDGPSQKTN-----QQQNQI-TKEMTVPNELIGAVIGK 724
TN+ +PR + N N N + TN ++ + I T ++ PN+++GA+IGK
Sbjct: 251 GNTNYYVPRGHHSQYNGVNTTNGVSSTTPTNGRNFARKSSHIATTSLSFPNDIVGALIGK 310
Query: 725 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
G++I +RK+SGA I I SEE E N+R T++G+P A+ A+ L+
Sbjct: 311 NGSRIQGVRKVSGATIGI---SEEVEGKNERIFTISGSPHAVEKAKGLL 356
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 11/158 (6%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFS---- 54
+ KE G +IG++G+ + +R+E+ +K IS + ERI+TV G +D+ +A S
Sbjct: 87 VSAKEAGCLIGQNGKVIDGIRDETNTKAGISRLQPGSHERILTVSGKLDNCAKALSYFAQ 146
Query: 55 -LITKNIEEFHKNQNKHLGGNG--ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
L IE ++ K L N E++ LRL+VP +Q G++IG G +I+ I+
Sbjct: 147 ALCDSTIETYNYFPLKQLSANPCIENETTILRLLVPNAQMGTLIGSKGLRIQQIQSNYHI 206
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLI 147
S+ + LP S ER V ++G + + A+ I CLI
Sbjct: 207 SMIASKSFLPGSNERLVELQGTVNDLYDALRIIARCLI 244
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 34/177 (19%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ ++G++IG G +++++ + S S P ER+V + G+++ L+ A
Sbjct: 177 LRLLVPNAQMGTLIGSKGLRIQQIQSNYHISMIASKSFLPGSNERLVELQGTVNDLYDAL 236
Query: 499 SLITKNIEE---------FHKNQNKHLGGNG---------------------ESQLIQLR 528
+I + + E ++ + H NG S +
Sbjct: 237 RIIARCLIEDISALGNTNYYVPRGHHSQYNGVNTTNGVSSTTPTNGRNFARKSSHIATTS 296
Query: 529 LIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
L P G++IGK GS+I+ +R+ SGA++ + S+ + ER I G P AV +A
Sbjct: 297 LSFPNDIVGALIGKNGSRIQGVRKVSGATIGI-SEEVEGKNERIFTISGSPHAVEKA 352
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 34/169 (20%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 61
++G++IG G +++++ + S S P ER+V + G+++ L+ A +I + +
Sbjct: 185 QMGTLIGSKGLRIQQIQSNYHISMIASKSFLPGSNERLVELQGTVNDLYDALRIIARCLI 244
Query: 62 E---------FHKNQNKHLGGNG---------------------ESQLIQLRLIVPASQC 91
E ++ + H NG S + L P
Sbjct: 245 EDISALGNTNYYVPRGHHSQYNGVNTTNGVSSTTPTNGRNFARKSSHIATTSLSFPNDIV 304
Query: 92 GSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
G++IGK GS+I+ +R+ SGA++ + S+ + ER I G P AV +A
Sbjct: 305 GALIGKNGSRIQGVRKVSGATIGI-SEEVEGKNERIFTISGSPHAVEKA 352
>gi|308489141|ref|XP_003106764.1| hypothetical protein CRE_16715 [Caenorhabditis remanei]
gi|308253418|gb|EFO97370.1| hypothetical protein CRE_16715 [Caenorhabditis remanei]
Length = 751
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKI-YISDSSTP--ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+I+G G T+KKL +E+G+KI ++ D T ER + +IG+ ++ A LI + ++
Sbjct: 255 VGAIMGVQGATIKKLSDETGTKIQFLPDDDTKLMERSLAIIGNRSKVYVAAQLIKQIVDS 314
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
+ N+ + + +PAS+CG +IG+GG IK I SGA V ++ + +
Sbjct: 315 SNDCANQAVA--------LFYMSIPASKCGLVIGRGGEVIKQINAESGAHVELSREANKD 366
Query: 123 STEREVNIKGVPDAVTQAIYQICLIMVDSPP 153
E+ I+G V A + IC+ + D PP
Sbjct: 367 PLEKTFVIRGSDIQVEHAKHLICIKVGDIPP 397
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
Query: 451 VGSIIGKSGETVKKLREESGSKI-YISDSSTP--ERIVTVIGSMDSLFRAFSLITKNIEE 507
VG+I+G G T+KKL +E+G+KI ++ D T ER + +IG+ ++ A LI + ++
Sbjct: 255 VGAIMGVQGATIKKLSDETGTKIQFLPDDDTKLMERSLAIIGNRSKVYVAAQLIKQIVDS 314
Query: 508 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 567
+ N+ + + +PAS+CG +IG+GG IK I SGA V ++ + +
Sbjct: 315 SNDCANQAVA--------LFYMSIPASKCGLVIGRGGEVIKQINAESGAHVELSREANKD 366
Query: 568 STEREVNIKGVPDAVTQAIYQICLIMVDSPP 598
E+ I+G V A + IC+ + D PP
Sbjct: 367 PLEKTFVIRGSDIQVEHAKHLICIKVGDIPP 397
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEE- 62
VG +IG++G + + + SG ++ ++ ++T RIV + G D + RA LI + I
Sbjct: 72 VGLVIGRNGSEIHSISQRSGCRVQVTTEPTNTGYRIVEIYGVPDKISRARDLINEVISRA 131
Query: 63 -------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
N + + + + +PA +CGSIIGKGG ++ +R +S +
Sbjct: 132 PHQPPPSPFPPSNALQHPTSDLPKVTIEIPIPADKCGSIIGKGGETMRRLRSSSNCHI 189
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEE- 507
VG +IG++G + + + SG ++ ++ ++T RIV + G D + RA LI + I
Sbjct: 72 VGLVIGRNGSEIHSISQRSGCRVQVTTEPTNTGYRIVEIYGVPDKISRARDLINEVISRA 131
Query: 508 -------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
N + + + + +PA +CGSIIGKGG ++ +R +S +
Sbjct: 132 PHQPPPSPFPPSNALQHPTSDLPKVTIEIPIPADKCGSIIGKGGETMRRLRSSSNCHI 189
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
I E +P + +G VIG+ G++I I + SG ++++ E ++ R + + G PD I
Sbjct: 61 IRSEYPIPEQCVGLVIGRNGSEIHSISQRSGCRVQVTT---EPTNTGYRIVEIYGVPDKI 117
Query: 322 ALAQYLIN 329
+ A+ LIN
Sbjct: 118 SRARDLIN 125
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
I E +P + +G VIG+ G++I I + SG ++++ E ++ R + + G PD I
Sbjct: 61 IRSEYPIPEQCVGLVIGRNGSEIHSISQRSGCRVQVTT---EPTNTGYRIVEIYGVPDKI 117
Query: 767 ALAQYLIN 774
+ A+ LIN
Sbjct: 118 SRARDLIN 125
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
G + S +I+ +P G +IG+ GS+I +I + SG V V ++ N+ R V I
Sbjct: 53 GMDHRSTVIRSEYPIPEQCVGLVIGRNGSEIHSISQRSGCRVQVTTEPT-NTGYRIVEIY 111
Query: 132 GVPDAVTQA 140
GVPD +++A
Sbjct: 112 GVPDKISRA 120
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
G + S +I+ +P G +IG+ GS+I +I + SG V V ++ N+ R V I
Sbjct: 53 GMDHRSTVIRSEYPIPEQCVGLVIGRNGSEIHSISQRSGCRVQVTTEPT-NTGYRIVEIY 111
Query: 577 GVPDAVTQA 585
GVPD +++A
Sbjct: 112 GVPDKISRA 120
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG---------- 489
R I+ +VGSIIG+ GE +KK+ EE+ S+I + D+ TP+RIV V G
Sbjct: 55 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAALSP 114
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+MD++ R F ++ E +NQ G S +RL+V ++Q ++IGK GS IK+
Sbjct: 115 AMDAVVRIFKRVSGFSETDAENQESAAGLAFSS----IRLLVASTQAINLIGKQGSLIKS 170
Query: 550 IRETSGASVYVAS----DMLPNSTEREVNIKGVPDAVTQAI 586
I+E + ASV V S + ER V I+G V +A+
Sbjct: 171 IQENTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKAL 211
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 20/153 (13%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIG----------SMDSLFRA 52
+VGSIIG+ GE +KK+ EE+ S+I + D+ TP+RIV V G +MD++ R
Sbjct: 63 KVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAALSPAMDAVVRI 122
Query: 53 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
F ++ E +NQ G S +RL+V ++Q ++IGK GS IK+I+E + AS
Sbjct: 123 FKRVSGFSETDAENQESAAGLAFSS----IRLLVASTQAINLIGKQGSLIKSIQENTSAS 178
Query: 113 VYVAS----DMLPNSTEREVNIKGVPDAVTQAI 141
V V S + ER V I+G V +A+
Sbjct: 179 VRVLSGDEVQFYATANERIVEIQGEALKVLKAL 211
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 107
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGS 545
L I + I E +N K + ++ Q+++IVP S G IIGKGG+
Sbjct: 108 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 167
Query: 546 QIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
+K I E SGA V ++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 168 TVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 226
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++L I + I
Sbjct: 61 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIR 120
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E +N K + ++ Q+++IVP S G IIGKGG+ +K I E SGA V
Sbjct: 121 EMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWV 180
Query: 114 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 181 QLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 400 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 459
Query: 325 QYLINMSV 332
QYLI +
Sbjct: 460 QYLITQRI 467
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 400 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 459
Query: 770 QYLINMSV 777
QYLI +
Sbjct: 460 QYLITQRI 467
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 250 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 36 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 95
Query: 309 DRTITMTGTPDAI 321
+R + GT +A+
Sbjct: 96 ERVCLIQGTIEAL 108
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 695 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 36 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 95
Query: 754 DRTITMTGTPDAI 766
+R + GT +A+
Sbjct: 96 ERVCLIQGTIEAL 108
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 43 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 102
Query: 132 GVPDAV 137
G +A+
Sbjct: 103 GTIEAL 108
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 43 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 102
Query: 577 GVPDAV 582
G +A+
Sbjct: 103 GTIEAL 108
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 140 AIYQIC 145
A Y I
Sbjct: 459 AQYLIT 464
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 585 AIYQIC 590
A Y I
Sbjct: 459 AQYLIT 464
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 161 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 220
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 221 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 280
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 281 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 330
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 171 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 230
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 231 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 290
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 291 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 330
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 536 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 595
Query: 325 QYLINMSV 332
QYLI+ V
Sbjct: 596 QYLISQRV 603
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 536 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 595
Query: 770 QYLINMSV 777
QYLI+ V
Sbjct: 596 QYLISQRV 603
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 161 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL-N 219
Query: 140 AIYQICLIMVDSPPKGATIP 159
A++ V P+ T P
Sbjct: 220 AVHSFIAEKVREIPQAMTKP 239
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 584
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 161 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL-N 219
Query: 585 AIYQICLIMVDSPPKGATIP 604
A++ V P+ T P
Sbjct: 220 AVHSFIAEKVREIPQAMTKP 239
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 40/64 (62%)
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
++ + ++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT
Sbjct: 155 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT 214
Query: 318 PDAI 321
+A+
Sbjct: 215 AEAL 218
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 40/64 (62%)
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
++ + ++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT
Sbjct: 155 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT 214
Query: 763 PDAI 766
+A+
Sbjct: 215 AEAL 218
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 424 VPQG---PNYANI---QTTGVQRRMRH---IMQGKEVGSIIGKSGETVKKLREESGSKIY 474
+PQ P NI QTT R + I+ G IIGK G TVK + E+SG+ +
Sbjct: 232 IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQ 291
Query: 475 ISDS----STPERIVTVIGSMDSLFRAFSLITKNIEE 507
+S + ER+VTV G + + +A S I + ++E
Sbjct: 292 LSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 328
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 126
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 524 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 581
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G P A A Y I
Sbjct: 582 RVTITGSPAATQAAQYLI 599
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 571
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 524 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 581
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G P A A Y I
Sbjct: 582 RVTITGSPAATQAAQYLI 599
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 6 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 65
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 66 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 125
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 126 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 175
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 16 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 75
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 76 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 135
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 136 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 175
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 6 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL-N 64
Query: 140 AIYQICLIMVDSPPKGATIP 159
A++ V P+ T P
Sbjct: 65 AVHSFIAEKVREIPQAMTKP 84
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 584
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 6 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL-N 64
Query: 585 AIYQICLIMVDSPPKGATIP 604
A++ V P+ T P
Sbjct: 65 AVHSFIAEKVREIPQAMTKP 84
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 7 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 66
Query: 325 QYLINMSVE 333
I V
Sbjct: 67 HSFIAEKVR 75
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 7 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 66
Query: 770 QYLINMSVE 778
I V
Sbjct: 67 HSFIAEKVR 75
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGSMDSLF 495
++ + I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G + +
Sbjct: 102 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 161
Query: 496 RAFSLITKNIEE 507
+A S I + ++E
Sbjct: 162 KAVSAIVQKVQE 173
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 69 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 128
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 129 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 188
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 189 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 238
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 79 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 138
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 139 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 198
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 199 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 238
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 69 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL-N 127
Query: 140 AIYQICLIMVDSPPKGATIP 159
A++ V P+ T P
Sbjct: 128 AVHSFIAEKVREIPQAMTKP 147
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%)
Query: 258 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
++ + ++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT
Sbjct: 63 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT 122
Query: 318 PDAIALAQYLINMSVE 333
+A+ I V
Sbjct: 123 AEALNAVHSFIAEKVR 138
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%)
Query: 703 QQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 762
++ + ++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT
Sbjct: 63 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT 122
Query: 763 PDAIALAQYLINMSVE 778
+A+ I V
Sbjct: 123 AEALNAVHSFIAEKVR 138
>gi|254566093|ref|XP_002490157.1| RNA binding protein with similarity to hnRNP-K that localizes to
the cytoplasm and subtelomeric DNA [Komagataella
pastoris GS115]
gi|238029953|emb|CAY67876.1| RNA binding protein with similarity to hnRNP-K that localizes to
the cytoplasm and subtelomeric DNA [Komagataella
pastoris GS115]
gi|328350558|emb|CCA36958.1| RNA-binding protein rnc1 [Komagataella pastoris CBS 7435]
Length = 379
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRA--- 497
R ++ +E G+IIGK G + +R K +S+ +RI+T+ GS++++ RA
Sbjct: 103 RFLVSKREAGTIIGKEGSCITSIRMGCDVKAGVSELVRGCVDRILTISGSVENVGRAVGR 162
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
+ + + F + GG + ++RL++P +Q G++IGK G +I+ +++
Sbjct: 163 LAQVLVDTAAFSQLDFAPSGGTSVMGVTRIRLLIPNTQMGALIGKRGIRIRALQQYHSVK 222
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLP 609
+ + D L NSTER V ++G P A+ A I CL+ P TI Y P
Sbjct: 223 MVASKDPLANSTERVVEVQGTPLAIESAAVTISKCLLEDFMLPAADTIYYVSAP 276
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 7/168 (4%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRA---FSLITK 58
+E G+IIGK G + +R K +S+ +RI+T+ GS++++ RA + +
Sbjct: 109 REAGTIIGKEGSCITSIRMGCDVKAGVSELVRGCVDRILTISGSVENVGRAVGRLAQVLV 168
Query: 59 NIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD 118
+ F + GG + ++RL++P +Q G++IGK G +I+ +++ + + D
Sbjct: 169 DTAAFSQLDFAPSGGTSVMGVTRIRLLIPNTQMGALIGKRGIRIRALQQYHSVKMVASKD 228
Query: 119 MLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLP 164
L NSTER V ++G P A+ A I CL+ P TI Y P
Sbjct: 229 PLANSTERVVEVQGTPLAIESAAVTISKCLLEDFMLPAADTIYYVSAP 276
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 297
T+ + P EL+GA+IGK G +I EIRK+SG I I
Sbjct: 303 TETVYFPGELVGAIIGKRGVRIQEIRKLSGCAISI 337
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRI 742
T+ + P EL+GA+IGK G +I EIRK+SG I I
Sbjct: 303 TETVYFPGELVGAIIGKRGVRIQEIRKLSGCAISI 337
Score = 39.7 bits (91), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 39/297 (13%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
P QK + IT V G +IGK G+ I IR G ++ + SE DR
Sbjct: 90 PLQK-DVSNTLITHRFLVSKREAGTIIGKEGSCITSIRM--GCDVK-AGVSELVRGCVDR 145
Query: 311 TITMTGTPDAIA-----LAQYLINMSVELLRANLN-GEGGGESNMDDFSSDNNLPSS--A 362
+T++G+ + + LAQ L++ + + L+ GG S M +P++
Sbjct: 146 ILTISGSVENVGRAVGRLAQVLVDTAA---FSQLDFAPSGGTSVMGVTRIRLLIPNTQMG 202
Query: 363 PLAG-----------------LNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDL 405
L G + + +PLA + ++ ++ P A+ + + L D
Sbjct: 203 ALIGKRGIRIRALQQYHSVKMVASKDPLANSTERVVEVQGTPLAIESAAVTISKCLLEDF 262
Query: 406 L--GGGSSGGGSGNSGGFGGVPQ---GPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGE 460
+ + S G+GG + G ++ N + G G+ VG+IIGK G
Sbjct: 263 MLPAADTIYYVSAPPAGYGGAARATTGDSFLNSDSLGPTSTETVYFPGELVGAIIGKRGV 322
Query: 461 TVKKLREESGSKIYISDSSTP--ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKH 515
++++R+ SG I I ++T ER + G + ++ RA +++T +E +H
Sbjct: 323 RIQEIRKLSGCAISIDSANTTGGERRFVLTGPVRNVDRALAMLTGLVEREKSRTKEH 379
>gi|380806987|gb|AFE75369.1| RNA-binding protein Nova-2, partial [Macaca mulatta]
Length = 296
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 60
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 61 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 120
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 121 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 160
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 506
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 60
Query: 507 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 61 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 120
Query: 559 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 121 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 160
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGSMDSLF 495
++ + I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G + +
Sbjct: 87 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 146
Query: 496 RAFSLITKNIEE 507
+A S I + ++E
Sbjct: 147 KAVSAIVQKVQE 158
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 274 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
G++IGKGG I +++K +GA I++SKS + + +R + GT +A+ I V
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 60
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
G++IGKGG I +++K +GA I++SKS + + +R + GT +A+ I V
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 60
>gi|350529339|ref|NP_001121330.2| KH-type splicing regulatory protein precursor [Xenopus laevis]
Length = 732
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 22/156 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI--- 60
VG IIG+ GE + K+++ESG K+ IS S PER+V++ GS D++ A L+ +
Sbjct: 163 VGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDAVQNAKMLLDDIVARG 222
Query: 61 -----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+FH + N G NG Q I ++PA + G IIGKGG IK ++E +G + +
Sbjct: 223 RGGPPSQFHDSSN---GQNGSLQEI----MIPAGKAGLIIGKGGETIKQLQERAGVKMIL 275
Query: 116 ASDMLPNST-EREVNIKGVPDAVTQAIYQICLIMVD 150
D N+ ++ + I G P V QA C +++D
Sbjct: 276 IQDGSQNTNMDKPLRIVGEPFKVQQA----CEMVMD 307
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 22/156 (14%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNI--- 505
VG IIG+ GE + K+++ESG K+ IS S PER+V++ GS D++ A L+ +
Sbjct: 163 VGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDAVQNAKMLLDDIVARG 222
Query: 506 -----EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+FH + N G NG Q I ++PA + G IIGKGG IK ++E +G + +
Sbjct: 223 RGGPPSQFHDSSN---GQNGSLQEI----MIPAGKAGLIIGKGGETIKQLQERAGVKMIL 275
Query: 561 ASDMLPNST-EREVNIKGVPDAVTQAIYQICLIMVD 595
D N+ ++ + I G P V QA C +++D
Sbjct: 276 IQDGSQNTNMDKPLRIVGEPFKVQQA----CEMVMD 307
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+SG+ +KK++ ++G +I D + P++I ++G D A +I ++
Sbjct: 344 VGVVIGRSGDMIKKIQNDAGVRIQFKQDDGTGPDKIAHIMGPPDRCEHAARIIGDLLQSL 403
Query: 64 H--------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 109
G ++ +P +CG +IG+GG +K I + +
Sbjct: 404 RTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQT 463
Query: 110 GASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
GA V ++ PN + I+G P + A
Sbjct: 464 GAFVEISRQPPPNGDPNFKMFTIRGNPQQIDHA 496
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+SG+ +KK++ ++G +I D + P++I ++G D A +I ++
Sbjct: 344 VGVVIGRSGDMIKKIQNDAGVRIQFKQDDGTGPDKIAHIMGPPDRCEHAARIIGDLLQSL 403
Query: 509 H--------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETS 554
G ++ +P +CG +IG+GG +K I + +
Sbjct: 404 RTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQT 463
Query: 555 GASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
GA V ++ PN + I+G P + A
Sbjct: 464 GAFVEISRQPPPNGDPNFKMFTIRGNPQQIDHA 496
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R +++TG+PDA+
Sbjct: 152 MTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDS---GGMPERVVSLTGSPDAV 208
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 357
A+ L++ V G GG S D S+ N
Sbjct: 209 QNAKMLLDDIV------ARGRGGPPSQFHDSSNGQN 238
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R +++TG+PDA+
Sbjct: 152 MTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDS---GGMPERVVSLTGSPDAV 208
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 802
A+ L++ V G GG S D S+ N
Sbjct: 209 QNAKMLLDDIV------ARGRGGPPSQFHDSSNGQN 238
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 265 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
EMT +P G VIG+GG + I + +GA + IS+ D N + T+ G P I
Sbjct: 435 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFTIRGNPQQID 494
Query: 323 LAQYLINMSVE 333
A+ LI +E
Sbjct: 495 HAKQLIEEKIE 505
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 710 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
EMT +P G VIG+GG + I + +GA + IS+ D N + T+ G P I
Sbjct: 435 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFTIRGNPQQID 494
Query: 768 LAQYLINMSVE 778
A+ LI +E
Sbjct: 495 HAKQLIEEKIE 505
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G IIGK GET+K+L+E +G K+ + S ++ ++ + ++G + +A ++ +
Sbjct: 250 KAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLL 309
Query: 61 EE-----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+E F +N+ G G + + VP G +IG+ G IK I+ +G +
Sbjct: 310 KERDQANFDRNEYGSR-GGGGGGGGGIDVPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQF 368
Query: 116 ASDMLPNSTEREVNIKGVPDAVTQA 140
D ++ +I G PD A
Sbjct: 369 KQDDG-TGPDKIAHIMGPPDRCEHA 392
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITKNI 505
+ G IIGK GET+K+L+E +G K+ + S ++ ++ + ++G + +A ++ +
Sbjct: 250 KAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLL 309
Query: 506 EE-----FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+E F +N+ G G + + VP G +IG+ G IK I+ +G +
Sbjct: 310 KERDQANFDRNEYGSR-GGGGGGGGGIDVPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQF 368
Query: 561 ASDMLPNSTEREVNIKGVPDAVTQA 585
D ++ +I G PD A
Sbjct: 369 KQDDG-TGPDKIAHIMGPPDRCEHA 392
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP G IIG+GG QI I++ SG V ++ D +P ER V++ G PDAV A
Sbjct: 158 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP---ERVVSLTGSPDAVQNA 211
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 531 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 585
VP G IIG+GG QI I++ SG V ++ D +P ER V++ G PDAV A
Sbjct: 158 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP---ERVVSLTGSPDAVQNA 211
>gi|354502186|ref|XP_003513168.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Cricetulus griseus]
Length = 574
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 120
H +G S + +L ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHNDIDGNSTIQEL--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 121 PNSTEREVNIKGVPDAVTQA 140
P ++ + I G P V QA
Sbjct: 205 PTGADKPLRITGDPFKVQQA 224
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 565
H +G S + +L ++PAS+ G +IGKGG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHNDIDGNSTIQEL--LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPL 204
Query: 566 PNSTEREVNIKGVPDAVTQA 585
P ++ + I G P V QA
Sbjct: 205 PTGADKPLRITGDPFKVQQA 224
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIINELI--L 322
Query: 64 HKNQNKHLGGNGESQ----------------LIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ LGG ++ + ++ VPA +CG +IGKGG IK+I +
Sbjct: 323 TAQERDGLGGLAVARGRGRGRGDWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 144
SGA V + + PN+ R I+G P + A + I
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARHLI 421
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I + I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIINELI--L 322
Query: 509 HKNQNKHLGGNGESQ----------------LIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+ LGG ++ + ++ VPA +CG +IGKGG IK+I +
Sbjct: 323 TAQERDGLGGLAVARGRGRGRGDWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQAIYQI 589
SGA V + + PN+ R I+G P + A + I
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARHLI 421
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 317 TPDAIALAQYLINMSVELLRANLNGEG 343
TP++I A+ L+ V+ R NG G
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGPG 153
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 762 TPDAIALAQYLINMSVELLRANLNGEG 788
TP++I A+ L+ V+ R NG G
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGPG 153
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 445 IMQGKEVGSIIGKSGETVKKLREESGSK-IYISDSSTP---ERIVTVIGSMDSLFRAFSL 500
++ +VG +IGK GET+K+L+E +G K + I D P ++ + + G + +A +
Sbjct: 168 LIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREM 227
Query: 501 ITKNIEEFHKNQNKHLGGNGESQLI----QLRLIVPASQCGSIIGKGGSQIKTIRETSGA 556
+ + I E K+Q G G+ + + VP G +IG+ G IK I+ +G
Sbjct: 228 VLEIIRE--KDQADFRGVRGDFASRAGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGV 285
Query: 557 SV-YVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+ + D + S ER + G PD A + I
Sbjct: 286 RIQFKPDDGI--SPERAAQVMGPPDRCQHAAHII 317
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P I +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVAR 418
Query: 326 YLINMSV 332
+LI+ V
Sbjct: 419 HLIDEKV 425
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P I +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVAR 418
Query: 771 YLINMSV 777
+LI+ V
Sbjct: 419 HLIDEKV 425
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 126 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 185
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 186 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 245
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 246 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 295
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 136 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 195
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 196 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 255
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 256 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 295
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 501 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 560
Query: 325 QYLINMSV 332
QYLI+ V
Sbjct: 561 QYLISQRV 568
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 501 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 560
Query: 770 QYLINMSV 777
QYLI+ V
Sbjct: 561 QYLISQRV 568
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 139
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 126 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL-N 184
Query: 140 AIYQICLIMVDSPPKGATIP 159
A++ V P+ T P
Sbjct: 185 AVHSFIAEKVREIPQAMTKP 204
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIKGVPDAVTQ 584
L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++G +A+
Sbjct: 126 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL-N 184
Query: 585 AIYQICLIMVDSPPKGATIP 604
A++ V P+ T P
Sbjct: 185 AVHSFIAEKVREIPQAMTKP 204
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 127 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 186
Query: 325 QYLINMSV 332
I V
Sbjct: 187 HSFIAEKV 194
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 127 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 186
Query: 770 QYLINMSV 777
I V
Sbjct: 187 HSFIAEKV 194
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 424 VPQG---PNYANI---QTTGVQRRMRH---IMQGKEVGSIIGKSGETVKKLREESGSKIY 474
+PQ P NI QTT R + I+ G IIGK G TVK + E+SG+ +
Sbjct: 197 IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQ 256
Query: 475 ISDS----STPERIVTVIGSMDSLFRAFSLITKNIEE 507
+S + ER+VTV G + + +A S I + ++E
Sbjct: 257 LSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 293
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 126
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 489 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 546
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G P A A Y I
Sbjct: 547 RVTITGSPAATQAAQYLI 564
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 571
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 489 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 546
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G P A A Y I
Sbjct: 547 RVTITGSPAATQAAQYLI 564
>gi|78101498|pdb|2AXY|A Chain A, Crystal Structure Of Kh1 Domain Of Human Poly(C)-Binding
Protein-2 With C-Rich Strand Of Human Telomeric Dna
gi|78101499|pdb|2AXY|B Chain B, Crystal Structure Of Kh1 Domain Of Human Poly(C)-Binding
Protein-2 With C-Rich Strand Of Human Telomeric Dna
gi|78101500|pdb|2AXY|C Chain C, Crystal Structure Of Kh1 Domain Of Human Poly(C)-Binding
Protein-2 With C-Rich Strand Of Human Telomeric Dna
gi|78101501|pdb|2AXY|D Chain D, Crystal Structure Of Kh1 Domain Of Human Poly(C)-Binding
Protein-2 With C-Rich Strand Of Human Telomeric Dna
gi|149243356|pdb|2PQU|A Chain A, Crystal Structure Of Kh1 Domain Of Human Pcbp2 Complexed
To Single- Stranded 12-Mer Telomeric Dna
gi|149243357|pdb|2PQU|B Chain B, Crystal Structure Of Kh1 Domain Of Human Pcbp2 Complexed
To Single- Stranded 12-Mer Telomeric Dna
gi|149243358|pdb|2PQU|C Chain C, Crystal Structure Of Kh1 Domain Of Human Pcbp2 Complexed
To Single- Stranded 12-Mer Telomeric Dna
gi|149243359|pdb|2PQU|D Chain D, Crystal Structure Of Kh1 Domain Of Human Pcbp2 Complexed
To Single- Stranded 12-Mer Telomeric Dna
gi|149243500|pdb|2PY9|A Chain A, Protein-Rna Interaction Involving Kh1 Domain From Human
Poly(C)-Binding Protein-2
gi|149243501|pdb|2PY9|B Chain B, Protein-Rna Interaction Involving Kh1 Domain From Human
Poly(C)-Binding Protein-2
gi|149243502|pdb|2PY9|C Chain C, Protein-Rna Interaction Involving Kh1 Domain From Human
Poly(C)-Binding Protein-2
gi|149243503|pdb|2PY9|D Chain D, Protein-Rna Interaction Involving Kh1 Domain From Human
Poly(C)-Binding Protein-2
Length = 73
Score = 74.3 bits (181), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 51/66 (77%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R + GKEVGSIIGK GE+VKK REESG++I IS+ + PERI+T+ G +++F+AF+ I
Sbjct: 7 IRLLXHGKEVGSIIGKKGESVKKXREESGARINISEGNCPERIITLAGPTNAIFKAFAXI 66
Query: 502 TKNIEE 507
+EE
Sbjct: 67 IDKLEE 72
Score = 72.8 bits (177), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 2 QGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNIE 61
GKEVGSIIGK GE+VKK REESG++I IS+ + PERI+T+ G +++F+AF+ I +E
Sbjct: 12 HGKEVGSIIGKKGESVKKXREESGARINISEGNCPERIITLAGPTNAIFKAFAXIIDKLE 71
Query: 62 E 62
E
Sbjct: 72 E 72
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 154
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 155 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 204
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 45 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 104
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 105 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 164
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 165 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 204
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 325 QYLINMSV 332
QYLI+ V
Sbjct: 470 QYLISQRV 477
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 770 QYLINMSV 777
QYLI+ V
Sbjct: 470 QYLISQRV 477
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 27 TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 86
Query: 132 GVPDAVTQAIYQICLIMVDSPPKGATIP 159
G +A+ A++ V P+ T P
Sbjct: 87 GTAEAL-NAVHSFIAEKVREIPQAMTKP 113
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 27 TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 86
Query: 577 GVPDAVTQAIYQICLIMVDSPPKGATIP 604
G +A+ A++ V P+ T P
Sbjct: 87 GTAEAL-NAVHSFIAEKVREIPQAMTKP 113
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 424 VPQG---PNYANI---QTTGVQRRMRH---IMQGKEVGSIIGKSGETVKKLREESGSKIY 474
+PQ P NI QTT R + I+ G IIGK G TVK + E+SG+ +
Sbjct: 106 IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQ 165
Query: 475 ISDS----STPERIVTVIGSMDSLFRAFSLITKNIEE 507
+S + ER+VTV G + + +A S I + ++E
Sbjct: 166 LSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 202
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
Query: 325 QYLINMSV 332
I V
Sbjct: 96 HSFIAEKV 103
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
Query: 770 QYLINMSV 777
I V
Sbjct: 96 HSFIAEKV 103
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 126
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 398 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 455
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G P A A Y I
Sbjct: 456 RVTITGSPAATQAAQYLI 473
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 571
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 398 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 455
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G P A A Y I
Sbjct: 456 RVTITGSPAATQAAQYLI 473
>gi|260941532|ref|XP_002614932.1| hypothetical protein CLUG_04947 [Clavispora lusitaniae ATCC 42720]
gi|238851355|gb|EEQ40819.1| hypothetical protein CLUG_04947 [Clavispora lusitaniae ATCC 42720]
Length = 370
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFS 499
R ++ KE G +IG++G + +R+E+ ++ IS T ERI+TV G +DS +A S
Sbjct: 19 FRVLVSAKEAGCLIGQNGAVIDSIRDETATRAGISQLRPGTHERILTVSGLVDSAAKALS 78
Query: 500 LITKNI-----------EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIK 548
+ + F Q + N E Q LR++VP SQ G++IG G +I+
Sbjct: 79 YFAQALVNASSETPFSYSYFPLKQMSRIA-NVEGQTTVLRMMVPNSQIGTLIGARGLRIQ 137
Query: 549 TIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYR 606
I+ S+ V+ L S+ER V ++G D + A+ + CL+ S + T+ Y
Sbjct: 138 QIQRQCNVSMIVSKSFLAGSSERLVELQGTVDNLYDAVRIVGRCLLSGASSSE-ETVLYV 196
Query: 607 PLPQNAGG----PGLIGNQFGMQNSLMGA 631
P P + P ++ ++GA
Sbjct: 197 PRPSSKAAEVPKPATTQETVSFRDDIVGA 225
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITK 58
+ KE G +IG++G + +R+E+ ++ IS T ERI+TV G +DS +A S +
Sbjct: 23 VSAKEAGCLIGQNGAVIDSIRDETATRAGISQLRPGTHERILTVSGLVDSAAKALSYFAQ 82
Query: 59 NI-----------EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ F Q + N E Q LR++VP SQ G++IG G +I+ I+
Sbjct: 83 ALVNASSETPFSYSYFPLKQMSRIA-NVEGQTTVLRMMVPNSQIGTLIGARGLRIQQIQR 141
Query: 108 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLIMVDSPPKGATIPYRPLPQ 165
S+ V+ L S+ER V ++G D + A+ + CL+ S + T+ Y P P
Sbjct: 142 QCNVSMIVSKSFLAGSSERLVELQGTVDNLYDAVRIVGRCLLSGASSSE-ETVLYVPRPS 200
Query: 166 NAGG----PGLIGNQFGMQNSLMGA 186
+ P ++ ++GA
Sbjct: 201 SKAAEVPKPATTQETVSFRDDIVGA 225
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 130/289 (44%), Gaps = 59/289 (20%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
LI R++V A + G +IG+ G+ I +IR+ + + S + P + ER + + G+ D+
Sbjct: 16 LINFRVLVSAKEAGCLIGQNGAVIDSIRDETATRAGI-SQLRPGTHERILTVSGLVDSAA 74
Query: 139 QAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGMQNSL-MGAPDMGNNPLAG 196
+A+ +V++ + + Y PL Q + I N G L M P+ L G
Sbjct: 75 KALSYFAQALVNASSETPFSYSYFPLKQMS----RIANVEGQTTVLRMMVPNSQIGTLIG 130
Query: 197 LAALG------------------LGGNSG------GGMGGGLNA------AALAALASSQ 226
L L G+S G + +A L+ +SS+
Sbjct: 131 ARGLRIQQIQRQCNVSMIVSKSFLAGSSERLVELQGTVDNLYDAVRIVGRCLLSGASSSE 190
Query: 227 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVP--NELIGAVIGKGGTKI 284
++PR PS K + T + TV ++++GA+IGK G++I
Sbjct: 191 ETVLYVPR----------------PSSKAAEVPKPATTQETVSFRDDIVGALIGKHGSRI 234
Query: 285 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 333
+RK+SGA I IS EE+ + +R+ T++G+P A+ A+ L+ ++E
Sbjct: 235 QGVRKVSGATIAIS----EEDGTGERSFTISGSPSAVGKAKRLLAFNLE 279
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 130/289 (44%), Gaps = 59/289 (20%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
LI R++V A + G +IG+ G+ I +IR+ + + S + P + ER + + G+ D+
Sbjct: 16 LINFRVLVSAKEAGCLIGQNGAVIDSIRDETATRAGI-SQLRPGTHERILTVSGLVDSAA 74
Query: 584 QAIYQICLIMVDSPPKG-ATIPYRPLPQNAGGPGLIGNQFGMQNSL-MGAPDMGNNPLAG 641
+A+ +V++ + + Y PL Q + I N G L M P+ L G
Sbjct: 75 KALSYFAQALVNASSETPFSYSYFPLKQMS----RIANVEGQTTVLRMMVPNSQIGTLIG 130
Query: 642 LAALG------------------LGGNSG------GGMGGGLNA------AALAALASSQ 671
L L G+S G + +A L+ +SS+
Sbjct: 131 ARGLRIQQIQRQCNVSMIVSKSFLAGSSERLVELQGTVDNLYDAVRIVGRCLLSGASSSE 190
Query: 672 LKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVP--NELIGAVIGKGGTKI 729
++PR PS K + T + TV ++++GA+IGK G++I
Sbjct: 191 ETVLYVPR----------------PSSKAAEVPKPATTQETVSFRDDIVGALIGKHGSRI 234
Query: 730 FEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
+RK+SGA I IS EE+ + +R+ T++G+P A+ A+ L+ ++E
Sbjct: 235 QGVRKVSGATIAIS----EEDGTGERSFTISGSPSAVGKAKRLLAFNLE 279
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 35/167 (20%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAF 498
+R ++ ++G++IG G +++++ + + +S S + ER+V + G++D+L+ A
Sbjct: 116 LRMMVPNSQIGTLIGARGLRIQQIQRQCNVSMIVSKSFLAGSSERLVELQGTVDNLYDAV 175
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQC--------------------GS 538
++ + + L G S+ L + P+S+ G+
Sbjct: 176 RIVGRCL----------LSGASSSEETVLYVPRPSSKAAEVPKPATTQETVSFRDDIVGA 225
Query: 539 IIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+IGK GS+I+ +R+ SGA++ ++ + + ER I G P AV +A
Sbjct: 226 LIGKHGSRIQGVRKVSGATIAISEE--DGTGERSFTISGSPSAVGKA 270
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 78/159 (49%), Gaps = 35/159 (22%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNIE 61
++G++IG G +++++ + + +S S + ER+V + G++D+L+ A ++ + +
Sbjct: 124 QIGTLIGARGLRIQQIQRQCNVSMIVSKSFLAGSSERLVELQGTVDNLYDAVRIVGRCL- 182
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQC--------------------GSIIGKGGSQ 101
L G S+ L + P+S+ G++IGK GS+
Sbjct: 183 ---------LSGASSSEETVLYVPRPSSKAAEVPKPATTQETVSFRDDIVGALIGKHGSR 233
Query: 102 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
I+ +R+ SGA++ ++ + + ER I G P AV +A
Sbjct: 234 IQGVRKVSGATIAISEE--DGTGERSFTISGSPSAVGKA 270
>gi|146189430|emb|CAM12243.1| poly(rC) binding protein 2 [Danio rerio]
Length = 112
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+ E S+DR +T+TG+P +I+
Sbjct: 36 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV---EGSSDRQVTITGSPASIS 92
Query: 323 LAQYLIN 329
LA+YLIN
Sbjct: 93 LAEYLIN 99
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
+ E+T+PN+LIG +IG+ G KI EIR++SGA I+I+ E S+DR +T+TG+P +I+
Sbjct: 36 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV---EGSSDRQVTITGSPASIS 92
Query: 768 LAQYLIN 774
LA+YLIN
Sbjct: 93 LAEYLIN 99
Score = 42.7 bits (99), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 142
L +P G IIG+ G++I IR+ SGA + +A+ + S++R+V I G P +++ A Y
Sbjct: 38 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-VEGSSDRQVTITGSPASISLAEY 96
Query: 143 QI 144
I
Sbjct: 97 LI 98
Score = 42.7 bits (99), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIY 587
L +P G IIG+ G++I IR+ SGA + +A+ + S++R+V I G P +++ A Y
Sbjct: 38 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-VEGSSDRQVTITGSPASISLAEY 96
Query: 588 QI 589
I
Sbjct: 97 LI 98
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 158/381 (41%), Gaps = 68/381 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIG---------- 489
R I + VGSIIGK G T++ L+ E+G+ I I +S + ER++ +
Sbjct: 247 FRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSP 306
Query: 490 SMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+ D++ R S I+++ +S + RL+VP+ G ++GKGGS I
Sbjct: 307 AQDAVLRVHSRISES-------------SMDKSSAVTARLLVPSQHIGCLLGKGGSIIAE 353
Query: 550 IRETSGASVYV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQICLIMVD---------- 595
+R+ +GA + + ++ +P +R V + G ++ A+ I + D
Sbjct: 354 MRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPG 413
Query: 596 -----------SPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNN---PLAG 641
+PP P G P F + MG DM ++ P
Sbjct: 414 GGMPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYPMPSF-RADRPMGPFDMVDHRPPPPHS 472
Query: 642 LAALG-------LGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRD 694
+ +G G GGG L+ + +A A + + PRN + + R
Sbjct: 473 MEHMGADRMPYSYGCEQGGGPRPFLDQPSPSAWAP-EAPNSEAPRNMPETVPP--ADFRK 529
Query: 695 GPSQKTNQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G TNQ E+ +P + IG + G G+ + EI+K+SGA I + + D+N
Sbjct: 530 GAVAGTNQVATPSNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHP--KPGDAN 587
Query: 754 DRTITMTGTPDAIALAQYLIN 774
I + G PD AQ L++
Sbjct: 588 ALVI-ICGDPDQTKKAQSLLH 607
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 155/372 (41%), Gaps = 68/372 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIG----------SMDSLFRAF 53
VGSIIGK G T++ L+ E+G+ I I +S + ER++ + + D++ R
Sbjct: 256 VGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVH 315
Query: 54 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
S I+++ +S + RL+VP+ G ++GKGGS I +R+ +GA +
Sbjct: 316 SRISES-------------SMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGI 362
Query: 114 YV-ASDMLPNSTERE---VNIKGVPDAVTQAIYQICLIMVD------------------- 150
+ ++ +P +R V + G ++ A+ I + D
Sbjct: 363 RIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPG 422
Query: 151 --SPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNN---PLAGLAALG---- 201
+PP P G P F + MG DM ++ P + +G
Sbjct: 423 GNAPPHHPRQEPAPPHPTGGMPPYPMPSF-RADRPMGPFDMVDHRPPPPHSMEHMGADRM 481
Query: 202 ---LGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQ 258
G GGG L+ + +A A + + PRN + + R G TNQ
Sbjct: 482 PYSYGCEQGGGPRPFLDQPSPSAWAP-EAPNSEAPRNMPETVPP--ADFRKGAVAGTNQV 538
Query: 259 QNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGT 317
E+ +P + IG + G G+ + EI+K+SGA I + + D+N I + G
Sbjct: 539 ATPSNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHP--KPGDANALVI-ICGD 595
Query: 318 PDAIALAQYLIN 329
PD AQ L++
Sbjct: 596 PDQTKKAQSLLH 607
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGS 545
L I + I E +N K + ++ Q+++IVP S G IIGKGG+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 546 QIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
+K + E SGA V ++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 169 TVKAVMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++L I + I
Sbjct: 62 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIR 121
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E +N K + ++ Q+++IVP S G IIGKGG+ +K + E SGA V
Sbjct: 122 EMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWV 181
Query: 114 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 182 QLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 460
Query: 325 QYLINMSV 332
QYLI +
Sbjct: 461 QYLITQRI 468
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 460
Query: 770 QYLINMSV 777
QYLI +
Sbjct: 461 QYLITQRI 468
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 250 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 309 DRTITMTGTPDAI 321
+R + GT +A+
Sbjct: 97 ERVCLIQGTVEAL 109
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 695 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 754 DRTITMTGTPDAI 766
+R + GT +A+
Sbjct: 97 ERVCLIQGTVEAL 109
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 132 GVPDAV 137
G +A+
Sbjct: 104 GTVEAL 109
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 577 GVPDAV 582
G +A+
Sbjct: 104 GTVEAL 109
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 140 AIYQIC 145
A Y I
Sbjct: 460 AQYLIT 465
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 585 AIYQIC 590
A Y I
Sbjct: 460 AQYLIT 465
>gi|126138010|ref|XP_001385528.1| hypothetical protein PICST_62156 [Scheffersomyces stipitis CBS
6054]
gi|126092806|gb|ABN67499.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 343
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFS 499
R ++ KE G +IG++G+ + +R E+ +K IS + ERI+TV G++D +A S
Sbjct: 69 YRVLVSAKESGCLIGQNGQVIDSIRAETNTKAGISRLQPGSHERILTVSGTLDDCAKALS 128
Query: 500 -----LITKNIEEFHKNQNKHLGGNG--ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
L IE ++ K L N E Q LRL++P SQ G++IG G +I+ I+
Sbjct: 129 YFAQALCNSTIETYNFFPLKQLSSNPCIEHQTTILRLLIPNSQMGTLIGSKGLRIQQIQN 188
Query: 553 TSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLI 592
S+ + LP S ER V ++G + + A+ I CLI
Sbjct: 189 KYNISMIASKSFLPGSNERLVELQGSVNDLYDALRIISRCLI 230
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFS---- 54
+ KE G +IG++G+ + +R E+ +K IS + ERI+TV G++D +A S
Sbjct: 73 VSAKESGCLIGQNGQVIDSIRAETNTKAGISRLQPGSHERILTVSGTLDDCAKALSYFAQ 132
Query: 55 -LITKNIEEFHKNQNKHLGGNG--ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGA 111
L IE ++ K L N E Q LRL++P SQ G++IG G +I+ I+
Sbjct: 133 ALCNSTIETYNFFPLKQLSSNPCIEHQTTILRLLIPNSQMGTLIGSKGLRIQQIQNKYNI 192
Query: 112 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI--CLI 147
S+ + LP S ER V ++G + + A+ I CLI
Sbjct: 193 SMIASKSFLPGSNERLVELQGSVNDLYDALRIISRCLI 230
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 132/304 (43%), Gaps = 55/304 (18%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 136
S LI R++V A + G +IG+ G I +IR + + S + P S ER + + G D
Sbjct: 64 SALINYRVLVSAKESGCLIGQNGQVIDSIRAETNTKAGI-SRLQPGSHERILTVSGTLDD 122
Query: 137 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGN----- 191
+A+ + +S + T + PL Q + P I +Q + L+ MG
Sbjct: 123 CAKALSYFAQALCNSTIE--TYNFFPLKQLSSNP-CIEHQTTILRLLIPNSQMGTLIGSK 179
Query: 192 -------------NPLAGLAALGLGGNSGGGMGGGLN---------AAALAALASSQLKT 229
+ +A + L + G +N + L SS + T
Sbjct: 180 GLRIQQIQNKYNISMIASKSFLPGSNERLVELQGSVNDLYDALRIISRCLIEDFSSIVGT 239
Query: 230 NH-MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK-EMTVPNELIGAVIGKGGTKIFEI 287
N+ +PR H+ NN P + N IT ++ PN+++GA+IGK G++I +
Sbjct: 240 NYYIPRG-------HHYNNSSSP-----RGANPITTASISFPNDIVGALIGKNGSRIQGV 287
Query: 288 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 347
RKISGA I I SEE E +R T++G+ A+ A+ ELL NL E S
Sbjct: 288 RKISGATIGI---SEEVEGKPERIFTLSGSAHAVEKAK-------ELLYHNLEREEQRRS 337
Query: 348 NMDD 351
++
Sbjct: 338 EAEE 341
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 132/304 (43%), Gaps = 55/304 (18%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDA 581
S LI R++V A + G +IG+ G I +IR + + S + P S ER + + G D
Sbjct: 64 SALINYRVLVSAKESGCLIGQNGQVIDSIRAETNTKAGI-SRLQPGSHERILTVSGTLDD 122
Query: 582 VTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGN----- 636
+A+ + +S + T + PL Q + P I +Q + L+ MG
Sbjct: 123 CAKALSYFAQALCNSTIE--TYNFFPLKQLSSNP-CIEHQTTILRLLIPNSQMGTLIGSK 179
Query: 637 -------------NPLAGLAALGLGGNSGGGMGGGLN---------AAALAALASSQLKT 674
+ +A + L + G +N + L SS + T
Sbjct: 180 GLRIQQIQNKYNISMIASKSFLPGSNERLVELQGSVNDLYDALRIISRCLIEDFSSIVGT 239
Query: 675 NH-MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITK-EMTVPNELIGAVIGKGGTKIFEI 732
N+ +PR H+ NN P + N IT ++ PN+++GA+IGK G++I +
Sbjct: 240 NYYIPRG-------HHYNNSSSP-----RGANPITTASISFPNDIVGALIGKNGSRIQGV 287
Query: 733 RKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGES 792
RKISGA I I SEE E +R T++G+ A+ A+ ELL NL E S
Sbjct: 288 RKISGATIGI---SEEVEGKPERIFTLSGSAHAVEKAK-------ELLYHNLEREEQRRS 337
Query: 793 NMDD 796
++
Sbjct: 338 EAEE 341
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ ++G++IG G +++++ + + S S P ER+V + GS++ L+ A
Sbjct: 163 LRLLIPNSQMGTLIGSKGLRIQQIQNKYNISMIASKSFLPGSNERLVELQGSVNDLYDAL 222
Query: 499 SLITKN-IEEFH------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 545
+I++ IE+F + N G + + + P G++IGK GS
Sbjct: 223 RIISRCLIEDFSSIVGTNYYIPRGHHYNNSSSPRGANPITTASISFPNDIVGALIGKNGS 282
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+I+ +R+ SGA++ + S+ + ER + G AV +A
Sbjct: 283 RIQGVRKISGATIGI-SEEVEGKPERIFTLSGSAHAVEKA 321
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKN-I 60
++G++IG G +++++ + + S S P ER+V + GS++ L+ A +I++ I
Sbjct: 171 QMGTLIGSKGLRIQQIQNKYNISMIASKSFLPGSNERLVELQGSVNDLYDALRIISRCLI 230
Query: 61 EEFH------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRET 108
E+F + N G + + + P G++IGK GS+I+ +R+
Sbjct: 231 EDFSSIVGTNYYIPRGHHYNNSSSPRGANPITTASISFPNDIVGALIGKNGSRIQGVRKI 290
Query: 109 SGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
SGA++ + S+ + ER + G AV +A
Sbjct: 291 SGATIGI-SEEVEGKPERIFTLSGSAHAVEKA 321
>gi|312071663|ref|XP_003138712.1| hypothetical protein LOAG_03127 [Loa loa]
Length = 201
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 101/230 (43%), Gaps = 44/230 (19%)
Query: 105 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
++E G + V + P STER V+IKG PD + + I ++ + P KG T PY +
Sbjct: 1 MKEELGVQMKVFAQCPPQSTERVVSIKGAPDKIIACVNHIMNMLKEIPIKGVTKPYESMF 60
Query: 165 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG--LNAAALAAL 222
+ G + + G M P+A + G N +GG L+A AL
Sbjct: 61 YDPSYSAEYGG-YPPDRNYRGP--MIRGPMAMTSYGNYGRNFPRQIGGRGPLSAVALPPY 117
Query: 223 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 282
GP + T ++T+PNEL G +IGKGG
Sbjct: 118 M--------------------------GPEEST---------QVTIPNELGGTIIGKGGE 142
Query: 283 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+I +R+ SGA I + +++S +R IT+TGT AI AQYL+ V
Sbjct: 143 RINRVREESGAQIVVGP----QQESGERIITITGTSTAIQTAQYLLQQCV 188
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 101/230 (43%), Gaps = 44/230 (19%)
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
++E G + V + P STER V+IKG PD + + I ++ + P KG T PY +
Sbjct: 1 MKEELGVQMKVFAQCPPQSTERVVSIKGAPDKIIACVNHIMNMLKEIPIKGVTKPYESMF 60
Query: 610 QNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGG--LNAAALAAL 667
+ G + + G M P+A + G N +GG L+A AL
Sbjct: 61 YDPSYSAEYGG-YPPDRNYRGP--MIRGPMAMTSYGNYGRNFPRQIGGRGPLSAVALPPY 117
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGT 727
GP + T ++T+PNEL G +IGKGG
Sbjct: 118 M--------------------------GPEEST---------QVTIPNELGGTIIGKGGE 142
Query: 728 KIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+I +R+ SGA I + +++S +R IT+TGT AI AQYL+ V
Sbjct: 143 RINRVREESGAQIVVGP----QQESGERIITITGTSTAIQTAQYLLQQCV 188
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 63 FHKNQNKHLGGNGESQLIQL----------RLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
+ +N + +GG G + L ++ +P G+IIGKGG +I +RE SGA
Sbjct: 95 YGRNFPRQIGGRGPLSAVALPPYMGPEESTQVTIPNELGGTIIGKGGERINRVREESGAQ 154
Query: 113 VYVASDMLPNSTEREVNIKGVPDAVTQAIY--QICL 146
+ V S ER + I G A+ A Y Q C+
Sbjct: 155 IVVGPQQ--ESGERIITITGTSTAIQTAQYLLQQCV 188
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 508 FHKNQNKHLGGNGESQLIQL----------RLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
+ +N + +GG G + L ++ +P G+IIGKGG +I +RE SGA
Sbjct: 95 YGRNFPRQIGGRGPLSAVALPPYMGPEESTQVTIPNELGGTIIGKGGERINRVREESGAQ 154
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIY--QICL 591
+ V S ER + I G A+ A Y Q C+
Sbjct: 155 IVVGPQQ--ESGERIITITGTSTAIQTAQYLLQQCV 188
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 7 GSIIGKSGETVKKLREESGSKIYI-SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
G+IIGK GE + ++REESG++I + + ERI+T+ G+ ++ A L+ + + +
Sbjct: 134 GTIIGKGGERINRVREESGAQIVVGPQQESGERIITITGTSTAIQTAQYLLQQCVRQ 190
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 452 GSIIGKSGETVKKLREESGSKIYI-SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 507
G+IIGK GE + ++REESG++I + + ERI+T+ G+ ++ A L+ + + +
Sbjct: 134 GTIIGKGGERINRVREESGAQIVVGPQQESGERIITITGTSTAIQTAQYLLQQCVRQ 190
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 41 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 100
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 101 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 160
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 161 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 210
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 51 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 110
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 111 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 170
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 171 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 210
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 416 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 475
Query: 325 QYLINMSV 332
QYLI+ V
Sbjct: 476 QYLISQRV 483
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 416 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 475
Query: 770 QYLINMSV 777
QYLI+ V
Sbjct: 476 QYLISQRV 483
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 33 TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 92
Query: 132 GVPDAVTQAIYQICLIMVDSPPKGATIP 159
G +A+ A++ V P+ T P
Sbjct: 93 GTAEAL-NAVHSFIAEKVREIPQAMTKP 119
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 33 TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 92
Query: 577 GVPDAVTQAIYQICLIMVDSPPKGATIP 604
G +A+ A++ V P+ T P
Sbjct: 93 GTAEAL-NAVHSFIAEKVREIPQAMTKP 119
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGSMDSLF 495
++ + I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G + +
Sbjct: 137 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 196
Query: 496 RAFSLITKNIEE 507
+A S I + ++E
Sbjct: 197 KAVSAIVQKVQE 208
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 42 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 101
Query: 325 QYLINMSV 332
I V
Sbjct: 102 HSFIAEKV 109
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 42 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 101
Query: 770 QYLINMSV 777
I V
Sbjct: 102 HSFIAEKV 109
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 126
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 404 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 461
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G P A A Y I
Sbjct: 462 RVTITGSPAATQAAQYLI 479
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 571
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 404 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 461
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G P A A Y I
Sbjct: 462 RVTITGSPAATQAAQYLI 479
>gi|363738574|ref|XP_003642030.1| PREDICTED: poly(rC)-binding protein 4-like [Gallus gallus]
Length = 222
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
P +N Q + ++E VPN+LIG +IG+ G+KI EIR++SGA I+I + E S++R
Sbjct: 43 PGLDSNSQSS--SQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKI---GNQTEGSSER 97
Query: 311 TITMTGTPDAIALAQYLINMSVELLRAN 338
IT+TG P +I LAQYLI +E ++
Sbjct: 98 HITITGNPVSITLAQYLITTCLETAKST 125
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
P +N Q + ++E VPN+LIG +IG+ G+KI EIR++SGA I+I + E S++R
Sbjct: 43 PGLDSNSQSS--SQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKI---GNQTEGSSER 97
Query: 756 TITMTGTPDAIALAQYLINMSVELLRAN 783
IT+TG P +I LAQYLI +E ++
Sbjct: 98 HITITGNPVSITLAQYLITTCLETAKST 125
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 72 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 131
G + SQ +VP G IIG+ GS+I IR+ SGA + + + S+ER + I
Sbjct: 44 GLDSNSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIG-NQTEGSSERHITIT 102
Query: 132 GVPDAVTQAIYQI--CL 146
G P ++T A Y I CL
Sbjct: 103 GNPVSITLAQYLITTCL 119
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 517 GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIK 576
G + SQ +VP G IIG+ GS+I IR+ SGA + + + S+ER + I
Sbjct: 44 GLDSNSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIG-NQTEGSSERHITIT 102
Query: 577 GVPDAVTQAIYQI--CL 591
G P ++T A Y I CL
Sbjct: 103 GNPVSITLAQYLITTCL 119
>gi|224142865|ref|XP_002324756.1| predicted protein [Populus trichocarpa]
gi|222866190|gb|EEF03321.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 15/151 (9%)
Query: 2 QGKEVGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLI 56
QG+ VG IIGK GET+K L+ +SG+KI ++ D ++P RIV ++G+ + + +A LI
Sbjct: 145 QGR-VGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTPEQIAKAEQLI 203
Query: 57 TKNIEEFHK----NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 112
+ E ++ G G S+ ++ +P ++ G +IGKGG IK ++ SGA
Sbjct: 204 NDVLAEADAGGSGTISRRYAGQGGSEHFSMK--IPNNKVGLVIGKGGDSIKNMQARSGAR 261
Query: 113 VYVASDMLP---NSTEREVNIKGVPDAVTQA 140
+ V LP STER V+I+G + V A
Sbjct: 262 IQVIPLHLPPGDTSTERTVHIEGTSEQVEAA 292
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
++K++ VP +G +IGKGG I ++ SGA I++++ + + +S R + + GTP+ I
Sbjct: 137 LSKKIDVPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTPEQI 196
Query: 322 ALAQYLIN 329
A A+ LIN
Sbjct: 197 AKAEQLIN 204
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
++K++ VP +G +IGKGG I ++ SGA I++++ + + +S R + + GTP+ I
Sbjct: 137 LSKKIDVPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTPEQI 196
Query: 767 ALAQYLIN 774
A A+ LIN
Sbjct: 197 AKAEQLIN 204
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 70 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTERE 127
+ GG+G S+ I VP + G IIGKGG IK ++ SGA + V DM PNS R
Sbjct: 131 YPGGSGLSKKID----VPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRI 186
Query: 128 VNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
V + G P+ + +A I ++ ++ +AGG G I ++ Q
Sbjct: 187 VELMGTPEQIAKAEQLINDVLAEA--------------DAGGSGTISRRYAGQ 225
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 515 HLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTERE 572
+ GG+G S+ I VP + G IIGKGG IK ++ SGA + V DM PNS R
Sbjct: 131 YPGGSGLSKKID----VPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRI 186
Query: 573 VNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 625
V + G P+ + +A I ++ ++ +AGG G I ++ Q
Sbjct: 187 VELMGTPEQIAKAEQLINDVLAEA--------------DAGGSGTISRRYAGQ 225
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED-SNDRTITMTGTPDAIALA 324
M +PN +G VIGKGG I ++ SGA I++ D S +RT+ + GT + + A
Sbjct: 233 MKIPNNKVGLVIGKGGDSIKNMQARSGARIQVIPLHLPPGDTSTERTVHIEGTSEQVEAA 292
Query: 325 QYLIN--MSVELL 335
+ L+N S ELL
Sbjct: 293 KQLVNEVTSEELL 305
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED-SNDRTITMTGTPDAIALA 769
M +PN +G VIGKGG I ++ SGA I++ D S +RT+ + GT + + A
Sbjct: 233 MKIPNNKVGLVIGKGGDSIKNMQARSGARIQVIPLHLPPGDTSTERTVHIEGTSEQVEAA 292
Query: 770 QYLIN--MSVELL 780
+ L+N S ELL
Sbjct: 293 KQLVNEVTSEELL 305
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.130 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,415,544,177
Number of Sequences: 23463169
Number of extensions: 753096255
Number of successful extensions: 5620044
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2119
Number of HSP's successfully gapped in prelim test: 2126
Number of HSP's that attempted gapping in prelim test: 5509343
Number of HSP's gapped (non-prelim): 87426
length of query: 914
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 762
effective length of database: 8,792,793,679
effective search space: 6700108783398
effective search space used: 6700108783398
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 82 (36.2 bits)