BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13906
(914 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 221 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 260
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 261 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 321 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 228
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 229 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 268
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 269 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 329 IANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 50/259 (19%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA ++++ + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA--GDMLPNSTERAVTISGTPDAI 187
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
Q + + V +L + G ++ P AS P+ A Q
Sbjct: 188 I--QCVKQICVVMLESPPKG------------------ATIPYRPKPASTPVIFAGGQAY 227
Query: 382 QI-----LTKPGALNAL-------TSLSALGGLSDLLGG-----GSSGGGSGNSGGFGGV 424
I + P L L T LG + G SS G G+
Sbjct: 228 TIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL 287
Query: 425 PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPE 482
P + + T + +G IIG+ G + ++R+ SG++I I++++ + E
Sbjct: 288 DASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSE 338
Query: 483 RIVTVIGSMDSLFRAFSLI 501
R +T+ G+ ++ A LI
Sbjct: 339 RQITITGTPANISLAQYLI 357
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 43 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 94
+G D+++ L + + H GG ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAIWAPPILPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 144
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 488 IGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQL--------IQLRLIVPASQCGSI 539
+G D+++ L + + H GG ES++ + +RL++ + GSI
Sbjct: 1 MGEGDAIWAPPILPHSTLGTLSHHPELHFGGKMESKVSEGGLNVTLTIRLLMHGKEVGSI 60
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGK G +K +RE SGA + ++ N ER V I G DA+ +A I
Sbjct: 61 IGKKGETVKKMREESGARINISEG---NCPERIVTITGPTDAIFKAFAMI 107
Score = 37.7 bits (86), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G++IGK G + ++R+ SGA I IS E + +R +T+TG DAI A +I
Sbjct: 57 VGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 333 E 333
E
Sbjct: 112 E 112
Score = 37.7 bits (86), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+G++IGK G + ++R+ SGA I IS E + +R +T+TG DAI A +I
Sbjct: 57 VGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 778 E 778
E
Sbjct: 112 E 112
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 30/341 (8%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+A
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKA 103
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA
Sbjct: 104 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 162
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGL 617
V VA DMLPNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P +
Sbjct: 163 VQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVI 220
Query: 618 I--GNQFGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKT 674
G + +Q + PD L L L + +G +T
Sbjct: 221 FAGGQAYTIQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QT 260
Query: 675 N-HMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR 733
N P + + N G S + T E+T+PN+LIG +IG+ GTKI EIR
Sbjct: 261 NPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIR 320
Query: 734 KISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
++SGA I+I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 321 QMSGAQIKIANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 205/333 (61%), Gaps = 30/333 (9%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVKK+REESG++I IS+ + PERIVT+ G D++F+AF++I
Sbjct: 52 MHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + + LRL+VPASQCGS+IGKGGS+IK IRE++GA V VA DML
Sbjct: 112 EEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML 170
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLI--GNQFG 178
PNSTER V I G PDA+ Q + QIC++M++SPPKGATIPYRP P A P + G +
Sbjct: 171 PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP--ASTPVIFAGGQAYT 228
Query: 179 MQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN-HMPRNQ 236
+Q + PD L L L + +G +TN P +
Sbjct: 229 IQGQYAIPHPDQ----LTKLHQLAMQQTPFPPLG----------------QTNPAFPGEK 268
Query: 237 NQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIR 296
+ N G S + T E+T+PN+LIG +IG+ GTKI EIR++SGA I+
Sbjct: 269 LPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 328
Query: 297 ISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I+ ++ E S++R IT+TGTP I+LAQYLIN
Sbjct: 329 IANAT---EGSSERQITITGTPANISLAQYLIN 358
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 50/259 (19%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG+KI EIR+ +GA ++++ + +S +R +T++GTPDAI
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA--GDMLPNSTERAVTISGTPDAI 187
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLA 381
Q + + V +L + G ++ P AS P+ A Q
Sbjct: 188 I--QCVKQICVVMLESPPKG------------------ATIPYRPKPASTPVIFAGGQAY 227
Query: 382 QI-----LTKPGALNAL-------TSLSALGGLSDLLGG-----GSSGGGSGNSGGFGGV 424
I + P L L T LG + G SS G G+
Sbjct: 228 TIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGL 287
Query: 425 PQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPE 482
P + + T + +G IIG+ G + ++R+ SG++I I++++ + E
Sbjct: 288 DASPPASTHELT---------IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSE 338
Query: 483 RIVTVIGSMDSLFRAFSLI 501
R +T+ G+ ++ A LI
Sbjct: 339 RQITITGTPANISLAQYLI 357
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 122 NSTEREVNIKGVPDAVTQAIYQI 144
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+F + + G + + +RL++ + GSIIGK G +K +RE SGA + ++
Sbjct: 28 QFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--- 84
Query: 567 NSTEREVNIKGVPDAVTQAIYQI 589
N ER V I G DA+ +A I
Sbjct: 85 NCPERIVTITGPTDAIFKAFAMI 107
Score = 37.7 bits (86), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G++IGK G + ++R+ SGA I IS E + +R +T+TG DAI A +I
Sbjct: 57 VGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 333 E 333
E
Sbjct: 112 E 112
Score = 37.7 bits (86), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+G++IGK G + ++R+ SGA I IS E + +R +T+TG DAI A +I
Sbjct: 57 VGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDAIFKAFAMIAYKF 111
Query: 778 E 778
E
Sbjct: 112 E 112
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 246 bits (627), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 212/364 (58%), Gaps = 28/364 (7%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----A 612
V VA DMLPNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + A
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFA 190
Query: 613 GGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALAS 669
GG + P M NP L G L A + G + L L
Sbjct: 191 GGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQ 244
Query: 670 SQLKTNHMPR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGG 726
++ +H P N + + + G + + E+T+PN+LIG +IG+ G
Sbjct: 245 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 304
Query: 727 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNG 786
KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+
Sbjct: 305 AKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSS 354
Query: 787 EGGG 790
E GG
Sbjct: 355 ETGG 358
Score = 243 bits (619), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 208/356 (58%), Gaps = 28/356 (7%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQN-----AGGPGLIGN 175
PNSTER + I G+P ++ + + QIC++M++SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 198
Query: 176 QFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHM 232
+ P M NP L G L A + G + L L ++ +H
Sbjct: 199 GSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQQSHF 252
Query: 233 PR---NQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRK 289
P N + + + G + + E+T+PN+LIG +IG+ G KI EIR+
Sbjct: 253 PMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 312
Query: 290 ISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGG 345
+SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L+ E GG
Sbjct: 313 MSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RLSSETGG 358
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 39/265 (14%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPLAG 366
+ + + V +L + G GG+ S + P + P
Sbjct: 156 --IECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMC 213
Query: 367 LNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGG 423
LN PL A Q + +P LT L L + G +G SG
Sbjct: 214 LNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIESS 267
Query: 424 VPQGPNY-----ANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD- 477
P+ Y A+ QTT + + + + +G IIG+ G + ++R+ SG++I I++
Sbjct: 268 SPEVKGYWAGLDASAQTTSHELTIPNDL----IGCIIGRQGAKINEIRQMSGAQIKIANP 323
Query: 478 -SSTPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 324 VEGSTDRQVTITGSAASISLAQYLI 348
Score = 40.0 bits (92), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 243 bits (621), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 220/401 (54%), Gaps = 60/401 (14%)
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
SG GG+ + P + + +R +M GKEVGSIIGK GETVK++RE+S ++I IS+
Sbjct: 2 SGSDGGLEEEPELS------ITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 478 SSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCG 537
S PERI T+ GS ++F A S+I ++E + GGN + LRL++PASQCG
Sbjct: 56 GSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCG 114
Query: 538 SIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
S+IGK G++IK IRET+GA V VA D+LPNSTER V + GVPDA+ + QIC ++++SP
Sbjct: 115 SLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESP 174
Query: 598 PKGATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGG 657
PKGATIPY P SL L + L N G + G
Sbjct: 175 PKGATIPYHP-------------------SL------------SLGTVLLSANQGFSVQG 203
Query: 658 GLNAAALAALAS-SQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
A A + QL ++ +P + P +T+ Q E VPN+
Sbjct: 204 QYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD------PGTQTSSQ------EFLVPND 251
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG VIG+ G+KI EIR++SGA I+I + E + +R +T+TG+P +IALAQYLI
Sbjct: 252 LIGCVIGRQGSKISEIRQMSGAHIKIGN---QAEGAGERHVTITGSPVSIALAQYLITAC 308
Query: 777 VELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNP 817
+E ++ GG S+ +D P S PL L + P
Sbjct: 309 LETAKST---SGGTPSSAP---ADLPAPFSPPLTALPTAPP 343
Score = 239 bits (609), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 152/373 (40%), Positives = 208/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALAS-SQLKTNHMPRNQNQN 239
SL L + L N G + G A A + QL ++ +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ P +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PGTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ GG S+ +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKST---SGGTPSSAP---ADLPAP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 TPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMV--------DSPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPSSAPADLPAPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 249 DGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
DG ++ + +T M + + +G++IGK G + IR+ S A I IS+ S E
Sbjct: 5 DGGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE---- 60
Query: 309 DRTITMTGTPDAIALAQYLINMSV--ELLRANLNG 341
R T+TG+ A+ A +I + +L A NG
Sbjct: 61 -RITTITGSTAAVFHAVSMIAFKLDEDLCAAPANG 94
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 243 bits (619), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 209/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRN 680
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -----SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSVVPGMD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PAD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPTPFSPPLTALPTAPP 343
Score = 239 bits (610), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 206/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GG+ + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-MPRNQNQN 239
SL L + L N G + G A A + Q + H +P
Sbjct: 185 -SL------------SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGMD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PADLPTP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPADLPTPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/377 (40%), Positives = 211/377 (55%), Gaps = 54/377 (14%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R +M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMI 79
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
++E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA
Sbjct: 80 AFKLDEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA 138
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQ 621
D+LPNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 139 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP-------------- 184
Query: 622 FGMQNSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 680
SL +G + N G S G G + A + L QL + +P
Sbjct: 185 -----SLSLGTVLLSTN----------QGFSVQGQYGTVTPAEVTKL--QQLSGHAVPFA 227
Query: 681 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 740
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I
Sbjct: 228 SPSMVPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
Query: 741 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSD 800
+I + E + +R +T+TG+P +IALAQYLI +E ++ G G +D
Sbjct: 276 KIGN---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTD 326
Query: 801 NNLPSSAPLAGLNASNP 817
P S PL L + P
Sbjct: 327 LPAPFSPPLTALPTAPP 343
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 208/373 (55%), Gaps = 54/373 (14%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GETVK++RE+S ++I IS+ S PERI T+ GS ++F A S+I +
Sbjct: 24 MHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKL 83
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
+E + GGN + LRL++PASQCGS+IGK G++IK IRET+GA V VA D+L
Sbjct: 84 DEDLCAAPAN-GGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
PNSTER V + GVPDA+ + QIC ++++SPPKGATIPY P
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------------ 184
Query: 181 NSL-MGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQN 239
SL +G + N G S G G + A + L QL + +P
Sbjct: 185 -SLSLGTVLLSTN----------QGFSVQGQYGTVTPAEVTKL--QQLSGHAVPFASPSM 231
Query: 240 QNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISK 299
+ PS +T+ Q E VPN+LIG VIG+ G+KI EIR++SGA I+I
Sbjct: 232 VPGLD------PSTQTSSQ------EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN 279
Query: 300 SSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLP 359
+ E + +R +T+TG+P +IALAQYLI +E ++ G G +D P
Sbjct: 280 ---QAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSA------PTDLPAP 330
Query: 360 SSAPLAGLNASNP 372
S PL L + P
Sbjct: 331 FSPPLTALPTAPP 343
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 70/254 (27%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAF 498
+R ++ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 499 SLITKNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL---- 527
I I E +H + N+ G+ ++L QL
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHA 223
Query: 528 ---------------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
+VP G +IG+ GS+I IR+ SGA + + +
Sbjct: 224 VPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAE 282
Query: 567 NSTEREVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---G 613
+ ER V I G P ++ A Y I CL S P P+ P P A
Sbjct: 283 GAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSP-PLTALPTA 341
Query: 614 GPGLIGNQFGMQNS 627
PGL+G + + S
Sbjct: 342 PPGLLGTPYAISLS 355
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 70/250 (28%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLIT 57
+ + GS+IGK+G +K++RE +G+++ ++ P ER VTV G D++ I
Sbjct: 108 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQIC 167
Query: 58 KNIEE---------FHKN---------QNKHLGGNGE---------SQLIQL-------- 82
I E +H + N+ G+ ++L QL
Sbjct: 168 AVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFA 227
Query: 83 -----------------RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
+VP G +IG+ GS+I IR+ SGA + + + + E
Sbjct: 228 SPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGE 286
Query: 126 REVNIKGVPDAVTQAIYQI--CLIMVD--------SPPKGATIPYRPLPQNA---GGPGL 172
R V I G P ++ A Y I CL S P P+ P P A PGL
Sbjct: 287 RHVTITGSPVSIALAQYLITACLETAKSTSGGTPGSAPTDLPAPFSP-PLTALPTAPPGL 345
Query: 173 IGNQFGMQNS 182
+G + + S
Sbjct: 346 LGTPYAISLS 355
Score = 40.0 bits (92), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LR+++ + GSIIGK G +K IRE S A + ++ P ER I G AV
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 140 AIYQICL 146
A+ I
Sbjct: 75 AVSMIAF 81
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 213/374 (56%), Gaps = 45/374 (12%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-- 611
V VA DMLPNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSP 190
Query: 612 ---AGGPGLIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALA 665
AGG + P M NP L G L A + G + L
Sbjct: 191 VIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLT 244
Query: 666 ALASSQLKTNHMPRN---------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNE 716
L ++ +H P ++ + D +Q T+ E+T+PN+
Sbjct: 245 KLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSH-------ELTIPND 297
Query: 717 LIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMS 776
LIG +IG+ G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+
Sbjct: 298 LIGCIIGRQGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV- 353
Query: 777 VELLRANLNGEGGG 790
L+ E GG
Sbjct: 354 ------RLSSETGG 361
Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/366 (40%), Positives = 209/366 (57%), Gaps = 45/366 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VKK+REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE + + + LRL+VPASQCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EEDISSSMTNSTAASRPP-VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVD----SPPKGATIPYRPLPQN-----AGGPG 171
PNSTER + I G+P ++ + + QIC++M++ SPPKG TIPYRP P + AGG
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQD 198
Query: 172 LIGNQFGMQNSLMGAPDMGNNP-LAG--LAALGLGGNSGGGMGGGLNAAALAALASSQLK 228
+ P M NP L G L A + G + L L ++
Sbjct: 199 RYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQY------AIPQPDLTKLHQLAMQ 252
Query: 229 TNHMPRN---------QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGK 279
+H P ++ + D +Q T+ E+T+PN+LIG +IG+
Sbjct: 253 QSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSH-------ELTIPNDLIGCIIGR 305
Query: 280 GGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
G KI EIR++SGA I+I+ E S DR +T+TG+ +I+LAQYLIN+ L
Sbjct: 306 QGAKINEIRQMSGAQIKIANPV---EGSTDRQVTITGSAASISLAQYLINV-------RL 355
Query: 340 NGEGGG 345
+ E GG
Sbjct: 356 SSETGG 361
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 30/262 (11%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P +I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGIPQSI 155
Query: 322 --ALAQYLINMSVELLRANLNGE---------------GGGESNMDDFSSDNNLPSSAPL 364
+ Q + M L ++ G GG+ S + P + P
Sbjct: 156 IECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPS 215
Query: 365 AGLNAS---NPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGF 421
LN PL A Q + +P LT L L + G +G SG
Sbjct: 216 MCLNPDLEGPPLEAYTIQGQYAIPQPD----LTKLHQLAMQQSHF--PMTHGNTGFSGIE 269
Query: 422 GGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SS 479
P+ Y + + + +G IIG+ G + ++R+ SG++I I++
Sbjct: 270 SSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEG 329
Query: 480 TPERIVTVIGSMDSLFRAFSLI 501
+ +R VT+ GS S+ A LI
Sbjct: 330 STDRQVTITGSAASISLAQYLI 351
Score = 40.0 bits (92), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K +RE SGA + ++ N ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG---NCPERIITLAGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 156 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 209
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 210 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 268
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 269 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 329 ITGSAASISLAQYLI 343
Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G++IGK G + IR+ SGA I IS E + +R IT+TG +AI A +I +
Sbjct: 25 VGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNAIFKAFAMI---I 76
Query: 333 ELLRANLN 340
+ L ++N
Sbjct: 77 DKLEEDIN 84
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+G++IGK G + IR+ SGA I IS E + +R IT+TG +AI A +I +
Sbjct: 25 VGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNAIFKAFAMI---I 76
Query: 778 ELLRANLN 785
+ L ++N
Sbjct: 77 DKLEEDIN 84
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 156 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 209
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 210 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 268
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 269 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 329 ITGSAASISLAQYLI 343
Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G++IGK G + IR+ SGA I IS E + +R IT+TG +AI A +I +
Sbjct: 25 VGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNAIFKAFAMI---I 76
Query: 333 ELLRANLN 340
+ L ++N
Sbjct: 77 DKLEEDIN 84
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+G++IGK G + IR+ SGA I IS E + +R IT+TG +AI A +I +
Sbjct: 25 VGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNAIFKAFAMI---I 76
Query: 778 ELLRANLN 785
+ L ++N
Sbjct: 77 DKLEEDIN 84
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 156 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 209
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 210 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 268
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 269 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 329 ITGSAASISLAQYLI 343
Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G++IGK G + IR+ SGA I IS E + +R IT+TG +AI A +I +
Sbjct: 25 VGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNAIFKAFAMI---I 76
Query: 333 ELLRANLN 340
+ L ++N
Sbjct: 77 DKLEEDIN 84
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+G++IGK G + IR+ SGA I IS E + +R IT+TG +AI A +I +
Sbjct: 25 VGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNAIFKAFAMI---I 76
Query: 778 ELLRANLN 785
+ L ++N
Sbjct: 77 DKLEEDIN 84
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 206/356 (57%), Gaps = 42/356 (11%)
Query: 438 VQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRA 497
V +R +M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+A
Sbjct: 12 VTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKA 71
Query: 498 FSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGAS 557
F++I +EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA
Sbjct: 72 FAMIIDKLEE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
Query: 558 VYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN- 611
V VA DMLPNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P +
Sbjct: 131 VQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS 190
Query: 612 ----AGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAAL 667
AGG + G ++ D+ PL + G S L+ A
Sbjct: 191 PVICAGGQDRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----- 236
Query: 668 ASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELI 718
K N + R Q+ H G + + + Q T E+T+PN LI
Sbjct: 237 -----KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLI 291
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 774
G +IG+ G I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 292 GCIIGRQGANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 202/348 (58%), Gaps = 42/348 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
M GKEVGSIIGK GE+VK++REESG++I IS+ + PERI+T+ G +++F+AF++I +
Sbjct: 20 MHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKL 79
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE N + + LRL+VPA+QCGS+IGKGG +IK IRE++GA V VA DML
Sbjct: 80 EE-DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDS---PPKG--ATIPYRPLPQN-----AGGP 170
PNSTER + I GVP +VT+ + QICL+M+++ P+G TIPY+P+P + AGG
Sbjct: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
Query: 171 GLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 230
+ G ++ D+ PL + G S L+ A K N
Sbjct: 199 DRCSDAAGYPHA---THDLEGPPLDAYSIQGQHTIS------PLDLA----------KLN 239
Query: 231 HMPRNQNQNQNQHNRNNRDGPSQKTNQQQ---------NQITKEMTVPNELIGAVIGKGG 281
+ R Q+ H G + + + Q T E+T+PN LIG +IG+ G
Sbjct: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 299
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
I EIR++SGA I+I+ E S+ R +T+TG+ +I+LAQYLIN
Sbjct: 300 ANINEIRQMSGAQIKIANPV---EGSSGRQVTITGSAASISLAQYLIN 344
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T + VP G++IGKGG KI EIR+ +GA +++ + + +S +R IT+ G P ++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLPNSTERAITIAGVPQSV 155
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPL--AGLNASNPLAAALPQ 379
I + ++ L+ G + +P+S+P+ AG AA P
Sbjct: 156 TECVKQICL---VMLETLSQSPQGRVMTIPY---QPMPASSPVICAGGQDRCSDAAGYPH 209
Query: 380 LAQILTKPGALNALT-------SLSALGGLSDLLGGGSS----GGGSGNSGGFGGVPQGP 428
L P L+A + S L L+ + S GG+G +G P+
Sbjct: 210 ATHDLEGP-PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK 268
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVT 486
Y Q + +G IIG+ G + ++R+ SG++I I++ + R VT
Sbjct: 269 GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVT 328
Query: 487 VIGSMDSLFRAFSLI 501
+ GS S+ A LI
Sbjct: 329 ITGSAASISLAQYLI 343
Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ +RL++ + GSIIGK G +K IRE SGA + ++ P ER + + G +A+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFK 70
Query: 140 AIYQI 144
A I
Sbjct: 71 AFAMI 75
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 273 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 332
+G++IGK G + IR+ SGA I IS E + +R IT+TG +AI A +I +
Sbjct: 25 VGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNAIFKAFAMI---I 76
Query: 333 ELLRANLN 340
+ L ++N
Sbjct: 77 DKLEEDIN 84
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 718 IGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSV 777
+G++IGK G + IR+ SGA I IS E + +R IT+TG +AI A +I +
Sbjct: 25 VGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNAIFKAFAMI---I 76
Query: 778 ELLRANLN 785
+ L ++N
Sbjct: 77 DKLEEDIN 84
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 171/356 (48%), Gaps = 57/356 (16%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVT 486
YA Q T +R ++ +E G IIGK+G+ V +LR + K ++ + + +R++T
Sbjct: 88 TYATQQLT-----LRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLT 142
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLI-QLRLIVPASQCGSIIGKGGS 545
+ G ++++ RA+ I I+ F KN G ++ +LRL++ S GSIIG+ G
Sbjct: 143 ISGPLENVVRAYRFI---IDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGL 199
Query: 546 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIP 604
+IK I++ + + DMLP STER V I G D + AI++I ++D +GA T+
Sbjct: 200 RIKLIQDKCSCRMIASKDMLPQSTERTVEIHGTVDNLHAAIWEIGKCLIDDWERGAGTVF 259
Query: 605 YRPLPQ-NAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAA 663
Y P+ + P L Q S AP SG + +
Sbjct: 260 YNPVSRLTQPLPSLASTASPQQVSPPAAP---------------STTSGEAIPENFVSYG 304
Query: 664 LAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIG 723
++Q MP QQ ++T+ +++P +++G +IG
Sbjct: 305 AQVFPATQ-----MP----------------------FLQQPKVTQNISIPADMVGCIIG 337
Query: 724 KGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVEL 779
+GG+KI EIR+ SG+ I I+K E +++ +R T+TGT + A +L+ +E+
Sbjct: 338 RGGSKISEIRRTSGSKISIAK--EPHDETGERMFTITGTHEENEKALFLLYQQLEM 391
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 164/339 (48%), Gaps = 52/339 (15%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDS--STPERIVTVIGSMDSLFRAFSLITK 58
+ +E G IIGK+G+ V +LR + K ++ + + +R++T+ G ++++ RA+ I
Sbjct: 100 LSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISGPLENVVRAYRFI-- 157
Query: 59 NIEEFHKNQNKHLGGNGESQLI-QLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS 117
I+ F KN G ++ +LRL++ S GSIIG+ G +IK I++ + +
Sbjct: 158 -IDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIASK 216
Query: 118 DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA-TIPYRPLPQ-NAGGPGLIGN 175
DMLP STER V I G D + AI++I ++D +GA T+ Y P+ + P L
Sbjct: 217 DMLPQSTERTVEIHGTVDNLHAAIWEIGKCLIDDWERGAGTVFYNPVSRLTQPLPSLAST 276
Query: 176 QFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRN 235
Q S AP SG + + ++Q MP
Sbjct: 277 ASPQQVSPPAAP---------------STTSGEAIPENFVSYGAQVFPATQ-----MP-- 314
Query: 236 QNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMI 295
QQ ++T+ +++P +++G +IG+GG+KI EIR+ SG+ I
Sbjct: 315 --------------------FLQQPKVTQNISIPADMVGCIIGRGGSKISEIRRTSGSKI 354
Query: 296 RISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVEL 334
I+K E +++ +R T+TGT + A +L+ +E+
Sbjct: 355 SIAK--EPHDETGERMFTITGTHEENEKALFLLYQQLEM 391
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 51/279 (18%)
Query: 244 NRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIR-KISGAMIRISKSSE 302
N N DG N + + + + L+G++IG+ G +I I+ K S MI S +
Sbjct: 164 NSTNPDGTPSDANTPRKL---RLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMI---ASKD 217
Query: 303 EEEDSNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSA 362
S +RT+ + GT D + A + I G+ +DD+
Sbjct: 218 MLPQSTERTVEIHGTVDNLHAAIWEI----------------GKCLIDDWERG------- 254
Query: 363 PLAGLNASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGS--GNSGG 420
AG NP++ LT+P L +L S ++ +S ++ G + N
Sbjct: 255 --AGTVFYNPVSR--------LTQP--LPSLASTASPQQVSPPAAPSTTSGEAIPENFVS 302
Query: 421 FGG-VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--- 476
+G V +Q V + + + VG IIG+ G + ++R SGSKI I+
Sbjct: 303 YGAQVFPATQMPFLQQPKVTQNIS--IPADMVGCIIGRGGSKISEIRRTSGSKISIAKEP 360
Query: 477 DSSTPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKH 515
T ER+ T+ G+ + +A L+ + + E K++ H
Sbjct: 361 HDETGERMFTITGTHEENEKALFLLYQQL-EMEKDRRSH 398
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS---DSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG IIG+ G + ++R SGSKI I+ T ER+ T+ G+ + +A L+ + + E
Sbjct: 332 VGCIIGRGGSKISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKALFLLYQQL-E 390
Query: 63 FHKNQNKH 70
K++ H
Sbjct: 391 MEKDRRSH 398
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 170/365 (46%), Gaps = 50/365 (13%)
Query: 441 RMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAF 498
+R + K I+G G T+ +++ E+ ++I IS++ PERIV V G+ D + +A+
Sbjct: 68 HLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAY 127
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I + + E H N++ NGE I + L++P G IIGK GS+++ I + S A +
Sbjct: 128 GMIVRALLEEHGNED-----NGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKL 182
Query: 559 YVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV----DSPPKGA--TIPYRPLPQNA 612
+ + + L S +R + I GVPDA+ A + I ++ +SP K +I Y+P N+
Sbjct: 183 FASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNS 242
Query: 613 -----GGPGLIGNQFGMQ----NSLMGAPDMGNNPLAG-LAALGLGGNSGGGMGGGLNAA 662
P I +Q Q + L+ N P++ L ++ + + NA
Sbjct: 243 VLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVA---NAT 299
Query: 663 ALAALASSQLKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITKEMTVPNELI 718
A N N DG P+ + N + +E+ + + +
Sbjct: 300 AFQP-----------------NFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFV 342
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVE 778
G VIGK G I +++ +G I I + E S++R +T+ GT A A LI+ +E
Sbjct: 343 GNVIGKDGKHINSVKESTGCSIII---QDPVEGSSERRLTIRGTFMASQAAIMLISNKIE 399
Query: 779 LLRAN 783
+ R+N
Sbjct: 400 IDRSN 404
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 167/357 (46%), Gaps = 50/357 (14%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
K I+G G T+ +++ E+ ++I IS++ PERIV V G+ D + +A+ +I + +
Sbjct: 76 KHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAKAYGMIVRALL 135
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 121
E H N++ NGE I + L++P G IIGK GS+++ I + S A ++ + + L
Sbjct: 136 EEHGNED-----NGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL 190
Query: 122 NSTEREVNIKGVPDAVTQAIYQICLIMV----DSPPKGA--TIPYRPLPQNA-----GGP 170
S +R + I GVPDA+ A + I ++ +SP K +I Y+P N+ P
Sbjct: 191 LSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQP 250
Query: 171 GLIGNQFGMQ----NSLMGAPDMGNNPLAG-LAALGLGGNSGGGMGGGLNAAALAALASS 225
I +Q Q + L+ N P++ L ++ + + NA A
Sbjct: 251 NTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVA---NATAFQP---- 303
Query: 226 QLKTNHMPRNQNQNQNQHNRNNRDG----PSQKTNQQQNQITKEMTVPNELIGAVIGKGG 281
N N DG P+ + N + +E+ + + +G VIGK G
Sbjct: 304 -------------NFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDG 350
Query: 282 TKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLINMSVELLRAN 338
I +++ +G I I + E S++R +T+ GT A A LI+ +E+ R+N
Sbjct: 351 KHINSVKESTGCSIII---QDPVEGSSERRLTIRGTFMASQAAIMLISNKIEIDRSN 404
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 42/270 (15%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDA 320
+I+ + +P+ L+G +IGK G+++ EI +S A ++ S + SNDR +T+ G PDA
Sbjct: 148 EISINLLIPHHLMGCIIGKRGSRLREIEDLSAA--KLFASPNQLLLSNDRILTINGVPDA 205
Query: 321 IALAQY-----LINMSVELLRANLNGEGGGE-----SNMDDFSSDNNL---------PSS 361
I +A + L+N +E + N+ + S + D S N + PS
Sbjct: 206 IHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSD 265
Query: 362 APLAGL-NASNPLAAALPQLAQILTKPGALNALTSLSALGGLSDL--LGGGSSGGGSGNS 418
L+ N + P+++ L +A ++ T+ + ++ L G GN
Sbjct: 266 KLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAPGN- 324
Query: 419 GGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD- 477
++ VQ+ + + K VG++IGK G+ + ++E +G I I D
Sbjct: 325 -------------HLLMNFVQQEI--FIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDP 369
Query: 478 -SSTPERIVTVIGSMDSLFRAFSLITKNIE 506
+ ER +T+ G+ + A LI+ IE
Sbjct: 370 VEGSSERRLTIRGTFMASQAAIMLISNKIE 399
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITK 58
+ K VG++IGK G+ + ++E +G I I D + ER +T+ G+ + A LI+
Sbjct: 337 IDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGTFMASQAAIMLISN 396
Query: 59 NIE 61
IE
Sbjct: 397 KIE 399
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ +++ I
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADTETIGEILKKI 101
Query: 502 TKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 561
+EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ +
Sbjct: 102 IPTLEEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 154
Query: 562 SDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 607
+ P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 155 QECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ +++ I +
Sbjct: 46 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADTETIGEILKKIIPTL 105
Query: 61 EEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDML 120
EE+ +H G+ +LRL++ S G IIG G++IK +RE + ++ + +
Sbjct: 106 EEY-----QHYKGSDFD--CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC 158
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
P+ST+R V I G PD V + I I ++ +SP KG PY P
Sbjct: 159 PHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDP 200
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 408
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 409 QNAQYLLQNSVK 420
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 408
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 409 QNAQYLLQNSVK 420
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 351 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 409
Query: 139 QAIY 142
A Y
Sbjct: 410 NAQY 413
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 351 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 409
Query: 584 QAIY 587
A Y
Sbjct: 410 NAQY 413
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 364 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 422
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 364 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 422
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST--EREVNIKGVP 134
++++LR+++ + G++IGKGG IK +R ASV V P+S+ ER ++I
Sbjct: 37 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV-----PDSSGPERILSISADT 91
Query: 135 DAVTQAIYQI 144
+ + + + +I
Sbjct: 92 ETIGEILKKI 101
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNST--EREVNIKGVP 579
++++LR+++ + G++IGKGG IK +R ASV V P+S+ ER ++I
Sbjct: 37 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV-----PDSSGPERILSISADT 91
Query: 580 DAVTQAIYQI 589
+ + + + +I
Sbjct: 92 ETIGEILKKI 101
Score = 33.9 bits (76), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 424 VPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP-- 481
+P Y + + + +R ++ G IIG G +K+LRE + + I + P
Sbjct: 102 IPTLEEYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHS 161
Query: 482 -ERIVTVIGSMDSLFRAFSLITKNIEE 507
+R+V + G D + +I I E
Sbjct: 162 TDRVVLIGGKPDRVVECIKIILDLISE 188
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 21/185 (11%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEE-------------------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGK 542
+EE +H G+ +LRL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFD--CELRLLIHQSLAGGIIGV 162
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGAT 602
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 163 KGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRA 222
Query: 603 IPYRP 607
PY P
Sbjct: 223 QPYDP 227
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 21/181 (11%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EE-------------------FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 101
EE +H G+ +LRL++ S G IIG G++
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFD--CELRLLIHQSLAGGIIGVKGAK 166
Query: 102 IKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYR 161
IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 167 IKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYD 226
Query: 162 P 162
P
Sbjct: 227 P 227
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIV 485
NY + + + +R ++ G IIG G +K+LRE + + I + P +R+V
Sbjct: 134 NYQHFKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 486 TVIGSMDSLFRAFSLITKNIEE 507
+ G D + +I I E
Sbjct: 194 LIGGKPDRVVECIKIILDLISE 215
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIV 485
NY + + + +R ++ G IIG G +K+LRE + + I + P +R+V
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 486 TVIGSMDSLFRAFSLITKNIEE 507
+ G D + +I I E
Sbjct: 194 LIGGKPDRVVECIKIILDLISE 215
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIV 485
NY + + + +R ++ G IIG G +K+LRE + + I + P +R+V
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 486 TVIGSMDSLFRAFSLITKNIEE 507
+ G D + +I I E
Sbjct: 194 LIGGKPDRVVECIKIILDLISE 215
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIV 485
NY + + + +R ++ G IIG G +K+LRE + + I + P +R+V
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 486 TVIGSMDSLFRAFSLITKNIEE 507
+ G D + +I I E
Sbjct: 194 LIGGKPDRVVECIKIILDLISE 215
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIV 485
NY + + + +R ++ G IIG G +K+LRE + + I + P +R+V
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 486 TVIGSMDSLFRAFSLITKNIEE 507
+ G D + +I I E
Sbjct: 194 LIGGKPDRVVECIKIILDLISE 215
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P+ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIV 485
NY + + + +R ++ G IIG G +K+LRE + + I + P +R+V
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVV 193
Query: 486 TVIGSMDSLFRAFSLITKNIEE 507
+ G D + +I I E
Sbjct: 194 LIGGKPDRVVECIKIILDLISE 215
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 23/186 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLI 501
+R ++Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 502 TKNIEEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIG 541
+EE + N + G + + +L RL++ S G IIG
Sbjct: 105 IPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIG 161
Query: 542 KGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGA 601
G++IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG
Sbjct: 162 VKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGR 221
Query: 602 TIPYRP 607
PY P
Sbjct: 222 AQPYDP 227
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Query: 1 MQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+Q K G++IGK G+ +K LR + + + + DSS PERI+++ ++++ I +
Sbjct: 49 LQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTL 108
Query: 61 EEFHK--------------------NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
EE + N + G + + +L RL++ S G IIG G+
Sbjct: 109 EEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCEL---RLLIHQSLAGGIIGVKGA 165
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPY 160
+IK +RE + ++ + + P ST+R V I G PD V + I I ++ +SP KG PY
Sbjct: 166 KIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPY 225
Query: 161 RP 162
P
Sbjct: 226 DP 227
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 322 ALAQYLINMSVE 333
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
IT ++T+P +L G++IGKGG +I +IR SGA I+I E E S DR IT+TGT D I
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRIITITGTQDQI 444
Query: 767 ALAQYLINMSVE 778
AQYL+ SV+
Sbjct: 445 QNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 138
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 139 QAIY 142
A Y
Sbjct: 446 NAQY 449
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVT 583
+I ++ +P GSIIGKGG +IK IR SGAS+ + + L S +R + I G D +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQ 445
Query: 584 QAIY 587
A Y
Sbjct: 446 NAQY 449
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 452 GSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
GSIIGK G+ +K++R ESG+ I I + + +RI+T+ G+ D + A L+ +++++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQY 458
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 77 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
++++LR+++ + G++IGKGG IK +R ASV V
Sbjct: 40 DEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 429 NYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIV 485
NY + + + +R ++ G IIG G +K+LRE + + I + P +R+V
Sbjct: 134 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVV 193
Query: 486 TVIGSMDSLFRAFSLITKNIEE 507
+ G D + +I I E
Sbjct: 194 LIGGKPDRVVECIKIILDLISE 215
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 160/379 (42%), Gaps = 63/379 (16%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSM----------------- 46
VG +IGKSG+ + +R + +KI + D +R++T+ S+
Sbjct: 47 VGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPL 106
Query: 47 ----DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 102
D+L + + I + EE + N N E RL+VP SQ S+IGK G I
Sbjct: 107 CCAQDALLKVYDAIVASDEENNTKTNVDRDDNKE-----CRLLVPFSQSSSLIGKAGENI 161
Query: 103 KTIRETSGASVYVASDMLPNST-------EREVNIKGVPDAVTQAIYQICLIMVDSPPKG 155
K IR + ASV V S + + + + V I G P++V QA++ + IM P+
Sbjct: 162 KRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPR- 220
Query: 156 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 215
IP Q+ +I + NS+ +N L G G+ N
Sbjct: 221 ENIPLDSTSQDVPAASVIVPS-DLSNSVYPQTGFYSNQDHIL-------QQGAGVPSYFN 272
Query: 216 AAALAALA-SSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 274
A +++ ++ N +P + H G S ++ ++ ++ P I
Sbjct: 273 ALSVSDFQGYAETAANPVPVFASSLPVTHGF----GGSSRS----EELVFKVLCPLCNIM 324
Query: 275 AVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDSNDRTITMTGTPDAIALAQYLINMSVE 333
VIGKGG+ I IR+ SG+ I ++ S + +D +T T +PD + +M+VE
Sbjct: 325 RVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMK------SMAVE 378
Query: 334 ---LLRANLNGEGGGESNM 349
LL+ +N E M
Sbjct: 379 AVLLLQEYINDEDAENVKM 397
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 160/379 (42%), Gaps = 63/379 (16%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISD--SSTPERIVTVIGSM----------------- 491
VG +IGKSG+ + +R + +KI + D +R++T+ S+
Sbjct: 47 VGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPL 106
Query: 492 ----DSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQI 547
D+L + + I + EE + N N E RL+VP SQ S+IGK G I
Sbjct: 107 CCAQDALLKVYDAIVASDEENNTKTNVDRDDNKE-----CRLLVPFSQSSSLIGKAGENI 161
Query: 548 KTIRETSGASVYVASDMLPNST-------EREVNIKGVPDAVTQAIYQICLIMVDSPPKG 600
K IR + ASV V S + + + + V I G P++V QA++ + IM P+
Sbjct: 162 KRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPR- 220
Query: 601 ATIPYRPLPQNAGGPGLIGNQFGMQNSLMGAPDMGNNPLAGLAALGLGGNSGGGMGGGLN 660
IP Q+ +I + NS+ +N L G G+ N
Sbjct: 221 ENIPLDSTSQDVPAASVIVPS-DLSNSVYPQTGFYSNQDHIL-------QQGAGVPSYFN 272
Query: 661 AAALAALA-SSQLKTNHMPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIG 719
A +++ ++ N +P + H G S ++ ++ ++ P I
Sbjct: 273 ALSVSDFQGYAETAANPVPVFASSLPVTHGF----GGSSRS----EELVFKVLCPLCNIM 324
Query: 720 AVIGKGGTKIFEIRKISGAMIRISKSSEEE-EDSNDRTITMTGTPDAIALAQYLINMSVE 778
VIGKGG+ I IR+ SG+ I ++ S + +D +T T +PD + +M+VE
Sbjct: 325 RVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMK------SMAVE 378
Query: 779 ---LLRANLNGEGGGESNM 794
LL+ +N E M
Sbjct: 379 AVLLLQEYINDEDAENVKM 397
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 152/355 (42%), Gaps = 44/355 (12%)
Query: 254 KTNQQQNQITKE--MTVPNELIGAVIGKGGTKIFEIRKISGAMIRI-----SKSSEEEED 306
KTN ++ KE + VP ++IGK G I IR+ + A +++ S S
Sbjct: 130 KTNVDRDD-NKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAM 188
Query: 307 SNDRTITMTGTPDAIALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAG 366
D + ++G P+++ Q L +S + + N N+ S+ ++P+++ +
Sbjct: 189 EYDNVVVISGEPESVK--QALFAVSAIMYKIN------PRENIPLDSTSQDVPAASVIVP 240
Query: 367 LNASN---PLAAALPQLAQILTK----PGALNALTSLSALGGLSDLLGGGSSGGGSG--N 417
+ SN P IL + P NAL S+S G ++ S
Sbjct: 241 SDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNAL-SVSDFQGYAETAANPVPVFASSLPV 299
Query: 418 SGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISD 477
+ GFGG + + MR +IGK G T+K++RE SGS I ++D
Sbjct: 300 THGFGGSSRSEELVFKVLCPLCNIMR----------VIGKGGSTIKRIREASGSCIEVND 349
Query: 478 SSTP---ERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPAS 534
S T + V ++ + +S S+ + + + N N ++++L+V +
Sbjct: 350 SRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEN-----VKMQLLVSSK 404
Query: 535 QCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
G +IGK GS I IR+ + A++ ++ + E + V DA+ Q + ++
Sbjct: 405 VIGCVIGKSGSVINEIRKRTNANICISKGKKDDLVEVSGEVSSVRDALIQIVLRL 459
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 9 IIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEEFHK 65
+IGK G T+K++RE SGS I ++DS T + V ++ + +S S+ + + +
Sbjct: 326 VIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQE 385
Query: 66 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 125
N N ++++L+V + G +IGK GS I IR+ + A++ ++ + E
Sbjct: 386 YINDEDAEN-----VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKKDDLVE 440
Query: 126 REVNIKGVPDAVTQAIYQI 144
+ V DA+ Q + ++
Sbjct: 441 VSGEVSSVRDALIQIVLRL 459
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ +P + V+GKGG + IR+ISGAMI IS S + D ++GT + + A
Sbjct: 539 EILIPAHAMSKVMGKGGGNLENIRRISGAMIEISAS---KTSHGDHIALLSGTLEQMRCA 595
Query: 325 QYLINMSV 332
+ L+ V
Sbjct: 596 ENLVQAFV 603
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ +P + V+GKGG + IR+ISGAMI IS S + D ++GT + + A
Sbjct: 539 EILIPAHAMSKVMGKGGGNLENIRRISGAMIEISAS---KTSHGDHIALLSGTLEQMRCA 595
Query: 770 QYLINMSV 777
+ L+ V
Sbjct: 596 ENLVQAFV 603
Score = 37.4 bits (85), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 56 ITKNIEEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
I +N E ++NQ + + + +L+ R++ P G +IGK G I IR + A +
Sbjct: 10 IQRNNSESNRNQKRRISHDKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKI 69
Query: 114 YVASDMLPNSTEREVNI 130
V D L ++R + I
Sbjct: 70 KVF-DQLHGCSQRVITI 85
Score = 37.4 bits (85), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 501 ITKNIEEFHKNQNKHLGGN--GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
I +N E ++NQ + + + +L+ R++ P G +IGK G I IR + A +
Sbjct: 10 IQRNNSESNRNQKRRISHDKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKI 69
Query: 559 YVASDMLPNSTEREVNI 575
V D L ++R + I
Sbjct: 70 KVF-DQLHGCSQRVITI 85
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 760
++ + ++ V +++IG VIGK G+ I EIRK + A I ISK + D + ++
Sbjct: 389 DEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK------DDLVEVS 442
Query: 761 GTPDAI--ALAQYLINMSVELL 780
G ++ AL Q ++ + ++L
Sbjct: 443 GEVSSVRDALIQIVLRLREDVL 464
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 43/250 (17%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
++ + ++ V +++IG VIGK G+ I EIRK + A I ISK + D + ++
Sbjct: 389 DEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK------DDLVEVS 442
Query: 316 GTPDAI--ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPL 373
G ++ AL Q ++ LR ++ G+ + + +N + L+ S+
Sbjct: 443 GEVSSVRDALIQIVLR-----LREDVLGDKDSVATRKPPARTDNC------SFLSGSSNA 491
Query: 374 AAALPQLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANI 433
LP ++++ S S G G + G +G +G +P
Sbjct: 492 GYTLPSF---------MSSMASTSGFHGYGSFPAGDNVLGSTG-PYSYGRLPSSSA---- 537
Query: 434 QTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP--ERIVTVIGSM 491
+ ++ + ++GK G ++ +R SG+ I IS S T + I + G++
Sbjct: 538 --------LEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTL 589
Query: 492 DSLFRAFSLI 501
+ + A +L+
Sbjct: 590 EQMRCAENLV 599
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGS 545
L I + I E +N K + ++ Q+++IVP S G IIGKGG+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 546 QIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
+K I E SGA V ++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 169 TVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++L I + I
Sbjct: 62 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIR 121
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E +N K + ++ Q+++IVP S G IIGKGG+ +K I E SGA V
Sbjct: 122 EMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWV 181
Query: 114 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 182 QLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 227
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 460
Query: 325 QYLINMSV 332
QYLI +
Sbjct: 461 QYLITQRI 468
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 460
Query: 770 QYLINMSV 777
QYLI +
Sbjct: 461 QYLITQRI 468
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 250 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 309 DRTITMTGTPDAI 321
+R + GT +A+
Sbjct: 97 ERVCLIQGTVEAL 109
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 695 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 754 DRTITMTGTPDAI 766
+R + GT +A+
Sbjct: 97 ERVCLIQGTVEAL 109
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 132 GVPDAV 137
G +A+
Sbjct: 104 GTVEAL 109
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 577 GVPDAV 582
G +A+
Sbjct: 104 GTVEAL 109
Score = 40.0 bits (92), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 140 AIYQIC 145
A Y I
Sbjct: 460 AQYLIT 465
Score = 40.0 bits (92), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 585 AIYQIC 590
A Y I
Sbjct: 460 AQYLIT 465
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
++ VPN G +IGKGG + I + SGA +++S+ + + +R +T++G P+
Sbjct: 151 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKP-DGINLQERVVTVSGEPE 204
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
++ VPN G +IGKGG + I + SGA +++S+ + + +R +T++G P+
Sbjct: 151 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKP-DGINLQERVVTVSGEPE 204
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 107
Query: 494 LFRAFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGS 545
L I + I E +N K + ++ Q+++IVP S G IIGKGG+
Sbjct: 108 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 167
Query: 546 QIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
+K I E SGA V ++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 168 TVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 226
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++L I + I
Sbjct: 61 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIR 120
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E +N K + ++ Q+++IVP S G IIGKGG+ +K I E SGA V
Sbjct: 121 EMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWV 180
Query: 114 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 158
++ D + N ER V + G P+ +A+ I + + P G+ +
Sbjct: 181 QLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCL 226
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 400 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 459
Query: 325 QYLINMSV 332
QYLI +
Sbjct: 460 QYLITQRI 467
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 400 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 459
Query: 770 QYLINMSV 777
QYLI +
Sbjct: 460 QYLITQRI 467
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 250 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 36 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 95
Query: 309 DRTITMTGTPDAI 321
+R + GT +A+
Sbjct: 96 ERVCLIQGTIEAL 108
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 695 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 36 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 95
Query: 754 DRTITMTGTPDAI 766
+R + GT +A+
Sbjct: 96 ERVCLIQGTIEAL 108
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 43 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 102
Query: 132 GVPDAV 137
G +A+
Sbjct: 103 GTIEAL 108
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 43 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 102
Query: 577 GVPDAV 582
G +A+
Sbjct: 103 GTIEAL 108
Score = 40.0 bits (92), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 140 AIYQIC 145
A Y I
Sbjct: 459 AQYLIT 464
Score = 40.0 bits (92), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 585 AIYQIC 590
A Y I
Sbjct: 459 AQYLIT 464
Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 319
++ VPN G +IGKGG + I + SGA +++S+ + + +R +T++G P+
Sbjct: 150 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKP-DGINLQERVVTVSGEPE 203
Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
++ VPN G +IGKGG + I + SGA +++S+ + + +R +T++G P+
Sbjct: 150 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKP-DGINLQERVVTVSGEPE 203
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFR 496
++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 497 AFSLITKNIEEFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIK 548
S I + + E + K N + Q +LIVP S G IIGKGG+ +K
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 154
Query: 549 TIRETSGASVYVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 597
+ E SGA V ++ P N ER V + G P+ V +A+ I + + P
Sbjct: 155 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 204
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ V G+ ++L S I + +
Sbjct: 45 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 104
Query: 62 EFHKNQNKHLGGN--------GESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 113
E + K N + Q +LIVP S G IIGKGG+ +K + E SGA V
Sbjct: 105 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 164
Query: 114 YVASDMLP---NSTEREVNIKGVPDAVTQAIYQICLIMVDSP 152
++ P N ER V + G P+ V +A+ I + + P
Sbjct: 165 QLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDP 204
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 325 QYLINMSV 332
QYLI+ V
Sbjct: 470 QYLISQRV 477
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TG+P A A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 770 QYLINMSV 777
QYLI+ V
Sbjct: 470 QYLISQRV 477
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 27 TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 86
Query: 132 GVPDAVTQAIYQICLIMVDSPPKGATIP 159
G +A+ A++ V P+ T P
Sbjct: 87 GTAEAL-NAVHSFIAEKVREIPQAMTKP 113
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER ++
Sbjct: 27 TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 86
Query: 577 GVPDAVTQAIYQICLIMVDSPPKGATIP 604
G +A+ A++ V P+ T P
Sbjct: 87 GTAEAL-NAVHSFIAEKVREIPQAMTKP 113
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
Query: 325 QYLINMSV 332
I V
Sbjct: 96 HSFIAEKV 103
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P+ G++IGKGG I +++K +GA I++SKS + + +R + GT +A+
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
Query: 770 QYLINMSV 777
I V
Sbjct: 96 HSFIAEKV 103
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 440 RRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGSMDSLF 495
++ + I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G + +
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 190
Query: 496 RAFSLITKNIEE 507
+A S I + ++E
Sbjct: 191 KAVSAIVQKVQE 202
Score = 40.0 bits (92), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 69 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 126
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 398 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 455
Query: 127 EVNIKGVPDAVTQAIYQI 144
V I G P A A Y I
Sbjct: 456 RVTITGSPAATQAAQYLI 473
Score = 40.0 bits (92), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 514 KHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTER 571
+ L +L+++ VP + G+I+GKGG + +E +GA + ++ + LP + R
Sbjct: 398 EKLAAESAKELVEIA--VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNR 455
Query: 572 EVNIKGVPDAVTQAIYQI 589
V I G P A A Y I
Sbjct: 456 RVTITGSPAATQAAQYLI 473
Score = 37.7 bits (86), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ VPN G +IGKGG + + + SGA +++S+ E + +R +T++G P+ + A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-EGINLQERVVTVSGEPEQVHKA 192
Query: 325 QYLINMSVE 333
I V+
Sbjct: 193 VSAIVQKVQ 201
Score = 37.7 bits (86), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ VPN G +IGKGG + + + SGA +++S+ E + +R +T++G P+ + A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP-EGINLQERVVTVSGEPEQVHKA 192
Query: 770 QYLINMSVE 778
I V+
Sbjct: 193 VSAIVQKVQ 201
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG IIG+ GE + ++++ESG KI I+ S PER + G+ +S+ A L+ + +E+
Sbjct: 112 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKG 171
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
H G +G +Q +++PAS+ G +IGKGG IK ++E +G + + D N+
Sbjct: 172 RPAPGFHHG-DGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT 229
Query: 124 -TEREVNIKGVPDAVTQAIYQICLIMVD 150
++ + I G P V QA + ++ D
Sbjct: 230 GADKPLRITGDPYKVQQAKEMVLELIRD 257
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG IIG+ GE + ++++ESG KI I+ S PER + G+ +S+ A L+ + +E+
Sbjct: 112 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKG 171
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
H G +G +Q +++PAS+ G +IGKGG IK ++E +G + + D N+
Sbjct: 172 RPAPGFHHG-DGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT 229
Query: 569 -TEREVNIKGVPDAVTQAIYQICLIMVD 595
++ + I G P V QA + ++ D
Sbjct: 230 GADKPLRITGDPYKVQQAKEMVLELIRD 257
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +TPERI + G D A +IT +
Sbjct: 287 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 346
Query: 64 H----------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
N ++G G L + IVP + G IIGKGG IK+I +
Sbjct: 347 QAGNPGGPGPGGRGRGRGQGNWNMGPPGG--LQEFNFIVPTGKTGLIIGKGGETIKSISQ 404
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
SGA + + + PN+ + I+G P + A
Sbjct: 405 QSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYA 439
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +TPERI + G D A +IT +
Sbjct: 287 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 346
Query: 509 H----------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
N ++G G L + IVP + G IIGKGG IK+I +
Sbjct: 347 QAGNPGGPGPGGRGRGRGQGNWNMGPPGG--LQEFNFIVPTGKTGLIIGKGGETIKSISQ 404
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
SGA + + + PN+ + I+G P + A
Sbjct: 405 QSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYA 439
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
P Q ++ +T+E VP+ ++G +IG+GG +I I++ SG I+I+ S +R
Sbjct: 90 PPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDS---GGLPER 146
Query: 311 TITMTGTPDAIALAQYLINMSVELLR 336
+ +TGTP+++ A+ L++ VE R
Sbjct: 147 SCMLTGTPESVQSAKRLLDQIVEKGR 172
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
P Q ++ +T+E VP+ ++G +IG+GG +I I++ SG I+I+ S +R
Sbjct: 90 PPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDS---GGLPER 146
Query: 756 TITMTGTPDAIALAQYLINMSVELLR 781
+ +TGTP+++ A+ L++ VE R
Sbjct: 147 SCMLTGTPESVQSAKRLLDQIVEKGR 172
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 5 EVGSIIGKSGETVKKLREESGSK-IYISD---SSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G +IGK GET+K+L+E +G K + I D ++ ++ + + G + +A ++ + I
Sbjct: 196 KAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELI 255
Query: 61 EE---FHKNQNKH---LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
+ F + +N++ +GGN + + +P G +IG+ G IK I+ +G +
Sbjct: 256 RDQGGFREVRNEYGSRIGGNEG-----IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQ 310
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQA 140
D + ER I G PD A
Sbjct: 311 FKPDDG-TTPERIAQITGPPDRCQHA 335
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
VP G +IGKGG I I + SGA I + ++ D N + T+ GTP I A+
Sbjct: 381 FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYAR 440
Query: 326 YLINMSV 332
LI +
Sbjct: 441 QLIEEKI 447
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
VP G +IGKGG I I + SGA I + ++ D N + T+ GTP I A+
Sbjct: 381 FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYAR 440
Query: 771 YLINMSV 777
LI +
Sbjct: 441 QLIEEKI 447
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 46/275 (16%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSNDRTITMTGTPDAI 321
+E+ +P G VIGKGG I ++++ +G M+ I + D+ + +TG P +
Sbjct: 187 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT--GADKPLRITGDPYKV 244
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSS--------DNNLPSSAP--LAGLNAS- 370
A+ M +EL+R +GG +++ S D +P A + G N
Sbjct: 245 QQAK---EMVLELIR----DQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEM 297
Query: 371 --------------NPLAAALPQ-LAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGS 415
P P+ +AQI P + ++DLL +G
Sbjct: 298 IKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEI-----ITDLLRSVQAGNPG 352
Query: 416 GNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI 475
G G G +G N+ G + I+ + G IIGK GET+K + ++SG++I +
Sbjct: 353 GPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIEL 412
Query: 476 SDSSTPE-----RIVTVIGSMDSLFRAFSLITKNI 505
+ P ++ T+ G+ + A LI + I
Sbjct: 413 QRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 38.5 bits (88), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP G IIG+GG QI I++ SG + +A D LP ER + G P++V A
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSA 160
Score = 35.0 bits (79), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTPE-----RIVTVIGSMDSLFRAFSLITKN 59
+ G IIGK GET+K + ++SG++I + + P ++ T+ G+ + A LI +
Sbjct: 387 KTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEK 446
Query: 60 I 60
I
Sbjct: 447 I 447
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG IIG+ GE + ++++ESG KI I+ S PER + G+ +S+ A L+ + +E+
Sbjct: 107 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKG 166
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
H G +G +Q +++PAS+ G +IGKGG IK ++E +G + + D N+
Sbjct: 167 RPAPGFHHG-DGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT 224
Query: 124 -TEREVNIKGVPDAVTQAIYQICLIMVD 150
++ + I G P V QA + ++ D
Sbjct: 225 GADKPLRITGDPYKVQQAKEMVLELIRD 252
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG IIG+ GE + ++++ESG KI I+ S PER + G+ +S+ A L+ + +E+
Sbjct: 107 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKG 166
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
H G +G +Q +++PAS+ G +IGKGG IK ++E +G + + D N+
Sbjct: 167 RPAPGFHHG-DGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT 224
Query: 569 -TEREVNIKGVPDAVTQAIYQICLIMVD 595
++ + I G P V QA + ++ D
Sbjct: 225 GADKPLRITGDPYKVQQAKEMVLELIRD 252
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +TP+RI + G D A +IT +
Sbjct: 282 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 341
Query: 64 H----------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
N ++G G L + IVP + G IIGKGG IK+I +
Sbjct: 342 QAGNPGGPGPGGRGRGRGQGNWNMGPPGG--LQEFNFIVPTGKTGLIIGKGGETIKSISQ 399
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
SGA + + + PN+ + I+G P + A
Sbjct: 400 QSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYA 434
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +TP+RI + G D A +IT +
Sbjct: 282 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 341
Query: 509 H----------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
N ++G G L + IVP + G IIGKGG IK+I +
Sbjct: 342 QAGNPGGPGPGGRGRGRGQGNWNMGPPGG--LQEFNFIVPTGKTGLIIGKGGETIKSISQ 399
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
SGA + + + PN+ + I+G P + A
Sbjct: 400 QSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYA 434
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
QQ++ +T+E VP+ ++G +IG+GG +I I++ SG I+I+ S +R+ +T
Sbjct: 90 QQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDS---GGLPERSCMLT 146
Query: 316 GTPDAIALAQYLINMSVELLR 336
GTP+++ A+ L++ VE R
Sbjct: 147 GTPESVQSAKRLLDQIVEKGR 167
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 760
QQ++ +T+E VP+ ++G +IG+GG +I I++ SG I+I+ S +R+ +T
Sbjct: 90 QQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDS---GGLPERSCMLT 146
Query: 761 GTPDAIALAQYLINMSVELLR 781
GTP+++ A+ L++ VE R
Sbjct: 147 GTPESVQSAKRLLDQIVEKGR 167
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 5 EVGSIIGKSGETVKKLREESGSK-IYISD---SSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G +IGK GET+K+L+E +G K + I D ++ ++ + + G + +A ++ + I
Sbjct: 191 KAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELI 250
Query: 61 EE---FHKNQNKH---LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
+ F + +N++ +GGN + + +P G +IG+ G IK I+ +G +
Sbjct: 251 RDQGGFREVRNEYGSRIGGNEG-----IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQ 305
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQA 140
D + +R I G PD A
Sbjct: 306 FKPDDG-TTPDRIAQITGPPDRCQHA 330
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
VP G +IGKGG I I + SGA I + ++ D N + T+ GTP I A+
Sbjct: 376 FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYAR 435
Query: 326 YLINMSV 332
LI +
Sbjct: 436 QLIEEKI 442
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
VP G +IGKGG I I + SGA I + ++ D N + T+ GTP I A+
Sbjct: 376 FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYAR 435
Query: 771 YLINMSV 777
LI +
Sbjct: 436 QLIEEKI 442
Score = 38.9 bits (89), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 46/275 (16%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSNDRTITMTGTPDAI 321
+E+ +P G VIGKGG I ++++ +G M+ I + D+ + +TG P +
Sbjct: 182 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT--GADKPLRITGDPYKV 239
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSS--------DNNLPSSAP--LAGLNAS- 370
A+ M +EL+R +GG +++ S D +P A + G N
Sbjct: 240 QQAK---EMVLELIR----DQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEM 292
Query: 371 --------------NPLAAALP-QLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGS 415
P P ++AQI P + ++DLL +G
Sbjct: 293 IKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEI-----ITDLLRSVQAGNPG 347
Query: 416 GNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI 475
G G G +G N+ G + I+ + G IIGK GET+K + ++SG++I +
Sbjct: 348 GPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIEL 407
Query: 476 SDSSTPE-----RIVTVIGSMDSLFRAFSLITKNI 505
+ P ++ T+ G+ + A LI + I
Sbjct: 408 QRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 442
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP G IIG+GG QI I++ SG + +A D LP ER + G P++V A
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSA 155
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTPE-----RIVTVIGSMDSLFRAFSLITKN 59
+ G IIGK GET+K + ++SG++I + + P ++ T+ G+ + A LI +
Sbjct: 382 KTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEK 441
Query: 60 I 60
I
Sbjct: 442 I 442
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG IIG+ GE + ++++ESG KI I+ S PER + G+ +S+ A L+ + +E+
Sbjct: 108 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKG 167
Query: 64 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 123
H G +G +Q +++PAS+ G +IGKGG IK ++E +G + + D N+
Sbjct: 168 RPAPGFHHG-DGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT 225
Query: 124 -TEREVNIKGVPDAVTQAIYQICLIMVD 150
++ + I G P V QA + ++ D
Sbjct: 226 GADKPLRITGDPYKVQQAKEMVLELIRD 253
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG IIG+ GE + ++++ESG KI I+ S PER + G+ +S+ A L+ + +E+
Sbjct: 108 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKG 167
Query: 509 HKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNS 568
H G +G +Q +++PAS+ G +IGKGG IK ++E +G + + D N+
Sbjct: 168 RPAPGFHHG-DGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT 225
Query: 569 -TEREVNIKGVPDAVTQAIYQICLIMVD 595
++ + I G P V QA + ++ D
Sbjct: 226 GADKPLRITGDPYKVQQAKEMVLELIRD 253
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +TP+RI + G D A +IT +
Sbjct: 283 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 342
Query: 64 H----------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
N ++G G L + IVP + G IIGKGG IK+I +
Sbjct: 343 QAGNPGGPGPGGRGRGRGQGNWNMGPPGG--LQEFNFIVPTGKTGLIIGKGGETIKSISQ 400
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
SGA + + PN+ + I+G P + A
Sbjct: 401 QSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYA 435
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +TP+RI + G D A +IT +
Sbjct: 283 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 342
Query: 509 H----------------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
N ++G G L + IVP + G IIGKGG IK+I +
Sbjct: 343 QAGNPGGPGPGGRGRGRGQGNWNMGPPGG--LQEFNFIVPTGKTGLIIGKGGETIKSISQ 400
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
SGA + + PN+ + I+G P + A
Sbjct: 401 QSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYA 435
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 251 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 310
P Q ++ +T+E VP+ ++G +IG+GG +I I++ SG I+I+ S +R
Sbjct: 86 PPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDS---GGLPER 142
Query: 311 TITMTGTPDAIALAQYLINMSVELLR 336
+ +TGTP+++ A+ L++ VE R
Sbjct: 143 SCMLTGTPESVQSAKRLLDQIVEKGR 168
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
P Q ++ +T+E VP+ ++G +IG+GG +I I++ SG I+I+ S +R
Sbjct: 86 PPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDS---GGLPER 142
Query: 756 TITMTGTPDAIALAQYLINMSVELLR 781
+ +TGTP+++ A+ L++ VE R
Sbjct: 143 SCMLTGTPESVQSAKRLLDQIVEKGR 168
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
VP G +IGKGG I I + SGA I + +S D N + T+ GTP I A+
Sbjct: 377 FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYAR 436
Query: 326 YLINMSV 332
LI +
Sbjct: 437 QLIEEKI 443
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
VP G +IGKGG I I + SGA I + +S D N + T+ GTP I A+
Sbjct: 377 FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYAR 436
Query: 771 YLINMSV 777
LI +
Sbjct: 437 QLIEEKI 443
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 5 EVGSIIGKSGETVKKLREESGSK-IYISD---SSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G +IGK GET+K+L+E +G K + I D ++ ++ + + G + +A ++ + I
Sbjct: 192 KAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELI 251
Query: 61 EE---FHKNQNKH---LGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
+ F + +N++ +GGN + + +P G +IG+ G IK I+ +G +
Sbjct: 252 RDQGGFREVRNEYGSRIGGNEG-----IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQ 306
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQA 140
D + +R I G PD A
Sbjct: 307 FKPDDG-TTPDRIAQITGPPDRCQHA 331
Score = 40.0 bits (92), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 46/275 (16%)
Query: 263 TKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSNDRTITMTGTPDAI 321
+E+ +P G VIGKGG I ++++ +G M+ I + D+ + +TG P +
Sbjct: 183 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT--GADKPLRITGDPYKV 240
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSS--------DNNLPSSAP--LAGLNAS- 370
A+ M +EL+R +GG +++ S D +P A + G N
Sbjct: 241 QQAK---EMVLELIR----DQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEM 293
Query: 371 --------------NPLAAALP-QLAQILTKPGALNALTSLSALGGLSDLLGGGSSGGGS 415
P P ++AQI P + ++DLL +G
Sbjct: 294 IKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEI-----ITDLLRSVQAGNPG 348
Query: 416 GNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI 475
G G G +G N+ G + I+ + G IIGK GET+K + ++SG++I +
Sbjct: 349 GPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIEL 408
Query: 476 SDSSTPE-----RIVTVIGSMDSLFRAFSLITKNI 505
S P ++ T+ G+ + A LI + I
Sbjct: 409 QRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 443
Score = 38.5 bits (88), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP G IIG+GG QI I++ SG + +A D LP ER + G P++V A
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSA 156
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTPE-----RIVTVIGSMDSLFRAFSLITKN 59
+ G IIGK GET+K + ++SG++I + S P ++ T+ G+ + A LI +
Sbjct: 383 KTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQLIEEK 442
Query: 60 I 60
I
Sbjct: 443 I 443
>sp|C5E0I9|HEK2_ZYGRC Heterogeneous nuclear rnp K-like protein 2 OS=Zygosaccharomyces
rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC
568 / NRRL Y-229) GN=HEK2 PE=3 SV=1
Length = 372
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 93/176 (52%), Gaps = 23/176 (13%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSL 500
R ++ KE +IG G T++ +RE + KI +S+ +R+++ G + ++ +
Sbjct: 63 RVLLSLKESAKVIGTKGSTIQNVREINHVKIGLSEKQLGCSDRVLSCAGRIINVAHSLGQ 122
Query: 501 ITKNIEE-----------FH----------KNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
I ++E FH +++ + L + +++ RL+V SQ SI
Sbjct: 123 IVSVLKEGSTVSSAEKYAFHFLNPILPPPTRDEFQDLTLDEINKIGTSRLMVTNSQLSSI 182
Query: 540 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 595
IGKGG++IK+++E + + D LP+S ER + I+G+P+A+T + QI I+++
Sbjct: 183 IGKGGARIKSLKERHRVKIVASRDFLPDSDERILEIQGLPNAITNVLLQISKILLN 238
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
KE +IG G T++ +RE + KI +S+ +R+++ G + ++ + I ++
Sbjct: 69 KESAKVIGTKGSTIQNVREINHVKIGLSEKQLGCSDRVLSCAGRIINVAHSLGQIVSVLK 128
Query: 62 E-----------FH----------KNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGS 100
E FH +++ + L + +++ RL+V SQ SIIGKGG+
Sbjct: 129 EGSTVSSAEKYAFHFLNPILPPPTRDEFQDLTLDEINKIGTSRLMVTNSQLSSIIGKGGA 188
Query: 101 QIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVD 150
+IK+++E + + D LP+S ER + I+G+P+A+T + QI I+++
Sbjct: 189 RIKSLKERHRVKIVASRDFLPDSDERILEIQGLPNAITNVLLQISKILLN 238
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 248 RDGPSQKTNQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 306
RD T + N+I T + V N + ++IGKGG +I +++ ++I S + D
Sbjct: 153 RDEFQDLTLDEINKIGTSRLMVTNSQLSSIIGKGGARIKSLKE--RHRVKIVASRDFLPD 210
Query: 307 SNDRTITMTGTPDAIA 322
S++R + + G P+AI
Sbjct: 211 SDERILEIQGLPNAIT 226
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 693 RDGPSQKTNQQQNQI-TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEED 751
RD T + N+I T + V N + ++IGKGG +I +++ ++I S + D
Sbjct: 153 RDEFQDLTLDEINKIGTSRLMVTNSQLSSIIGKGGARIKSLKE--RHRVKIVASRDFLPD 210
Query: 752 SNDRTITMTGTPDAIA 767
S++R + + G P+AI
Sbjct: 211 SDERILEIQGLPNAIT 226
Score = 33.5 bits (75), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE---EEDSNDRT 311
+N N+ + +P +GA+ G+ G +I +RK + I + K ++ + D ++RT
Sbjct: 277 SNYLNNEFKATLKIPESYVGAIAGRRGNRIANLRKFTKTKIIVEKKIDKTVIDVDPDNRT 336
Query: 312 ITMTGTP-DAIALAQYLI--NMSVEL 334
+ G + LA+ ++ N+ VE+
Sbjct: 337 FIILGDHFKNVKLAESMLLKNLDVEI 362
Score = 33.5 bits (75), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 700 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEE---EEDSNDRT 756
+N N+ + +P +GA+ G+ G +I +RK + I + K ++ + D ++RT
Sbjct: 277 SNYLNNEFKATLKIPESYVGAIAGRRGNRIANLRKFTKTKIIVEKKIDKTVIDVDPDNRT 336
Query: 757 ITMTGTP-DAIALAQYLI--NMSVEL 779
+ G + LA+ ++ N+ VE+
Sbjct: 337 FIILGDHFKNVKLAESMLLKNLDVEI 362
>sp|Q6FUD8|HEK2_CANGA Heterogeneous nuclear rnp K-like protein 2 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=HEK2 PE=3 SV=1
Length = 349
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 33/181 (18%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGS-KIYISDSS--TPERIVTVIGSMDSLFRAF- 498
R ++ KE +IG G +++ +R+ + + KI IS+ +R++T G ++ + A
Sbjct: 6 RILLSLKEAAKVIGTQGNSIQSVRDNNNNVKIGISEKVPGCSDRVLTCSGEVEDVCSALG 65
Query: 499 ---SLITKNIEEFHKNQNKHLG-------------------GNGESQLIQ-------LRL 529
+L+ K E + N H E L + LRL
Sbjct: 66 DVVTLLNKPSENEEETDNHHFYFLNHLLPVPTLDDLKATDPEASEEALHEQLQNIGYLRL 125
Query: 530 IVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQI 589
+V SQ SIIGKGG+QIK++ E G + + LP+STER + I+GVP A+ Q + I
Sbjct: 126 LVFNSQLSSIIGKGGNQIKSLIEKHGVKLVASRAFLPDSTERMLEIQGVPSAIKQVLLDI 185
Query: 590 C 590
C
Sbjct: 186 C 186
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 33/175 (18%)
Query: 4 KEVGSIIGKSGETVKKLREESGS-KIYISDSS--TPERIVTVIGSMDSLFRAF----SLI 56
KE +IG G +++ +R+ + + KI IS+ +R++T G ++ + A +L+
Sbjct: 12 KEAAKVIGTQGNSIQSVRDNNNNVKIGISEKVPGCSDRVLTCSGEVEDVCSALGDVVTLL 71
Query: 57 TKNIEEFHKNQNKHLG-------------------GNGESQLIQ-------LRLIVPASQ 90
K E + N H E L + LRL+V SQ
Sbjct: 72 NKPSENEEETDNHHFYFLNHLLPVPTLDDLKATDPEASEEALHEQLQNIGYLRLLVFNSQ 131
Query: 91 CGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC 145
SIIGKGG+QIK++ E G + + LP+STER + I+GVP A+ Q + IC
Sbjct: 132 LSSIIGKGGNQIKSLIEKHGVKLVASRAFLPDSTERMLEIQGVPSAIKQVLLDIC 186
>sp|Q756R8|HEK2_ASHGO Heterogeneous nuclear rnp K-like protein 2 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HEK2 PE=3 SV=1
Length = 316
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFSLITKNIE 61
KE I+G+ G T+ +R+ +G KI IS + S +R++ V GS+D++ + + + K +
Sbjct: 42 KEAARILGRGGNTIDNIRKANGVKIGISTKEKSCSDRLLEVTGSIDAVANSLADVVKVLT 101
Query: 62 EFHKNQN-----------KHLG--------GNGES-----QLIQLRLIVPASQCGSIIGK 97
N+ KHL E Q+ LRLIV SQ SIIG
Sbjct: 102 ADDTNEEDAEPEPEQHIFKHLNFILPPPSPDEAEDPMKVKQIGNLRLIVTNSQVSSIIGT 161
Query: 98 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV 149
GS+IK + +T + + V+ LP+S +R + I+G P+++ I I ++
Sbjct: 162 AGSKIKKLIDTHSSKLVVSKTFLPDSQDRILEIQGFPNSIANCIKDISQTLI 213
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAFSLITKNIE 506
KE I+G+ G T+ +R+ +G KI IS + S +R++ V GS+D++ + + + K +
Sbjct: 42 KEAARILGRGGNTIDNIRKANGVKIGISTKEKSCSDRLLEVTGSIDAVANSLADVVKVLT 101
Query: 507 EFHKNQN-----------KHLG--------GNGES-----QLIQLRLIVPASQCGSIIGK 542
N+ KHL E Q+ LRLIV SQ SIIG
Sbjct: 102 ADDTNEEDAEPEPEQHIFKHLNFILPPPSPDEAEDPMKVKQIGNLRLIVTNSQVSSIIGT 161
Query: 543 GGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMV 594
GS+IK + +T + + V+ LP+S +R + I+G P+++ I I ++
Sbjct: 162 AGSKIKKLIDTHSSKLVVSKTFLPDSQDRILEIQGFPNSIANCIKDISQTLI 213
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 11/145 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAF 498
+R I+ +V SIIG +G +KKL + SK+ +S + P+ RI+ + G +S+
Sbjct: 146 LRLIVTNSQVSSIIGTAGSKIKKLIDTHSSKLVVSKTFLPDSQDRILEIQGFPNSIANCI 205
Query: 499 SLITKNI---EEFHKNQNKHLGGNGESQLIQLR--LIVPASQCGSIIGKGGSQIKTIRET 553
I++ + + + ++ + S+ I + + +PA G+++G GG++I +R+
Sbjct: 206 KDISQTLIKDDVLDTKEKRYYPHSKHSKDIHVTATVAIPAEYVGALLGHGGNRIANLRKY 265
Query: 554 SGASVYVASDMLPN-STEREVNIKG 577
+ + VA + PN + ERE I G
Sbjct: 266 TRTKITVAQE--PNQNNEREFTITG 288
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNI- 60
+V SIIG +G +KKL + SK+ +S + P+ RI+ + G +S+ I++ +
Sbjct: 154 QVSSIIGTAGSKIKKLIDTHSSKLVVSKTFLPDSQDRILEIQGFPNSIANCIKDISQTLI 213
Query: 61 --EEFHKNQNKHLGGNGESQLIQLR--LIVPASQCGSIIGKGGSQIKTIRETSGASVYVA 116
+ + ++ + S+ I + + +PA G+++G GG++I +R+ + + VA
Sbjct: 214 KDDVLDTKEKRYYPHSKHSKDIHVTATVAIPAEYVGALLGHGGNRIANLRKYTRTKITVA 273
Query: 117 SDMLPN-STEREVNIKG 132
+ PN + ERE I G
Sbjct: 274 QE--PNQNNEREFTITG 288
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP-D 319
+T + +P E +GA++G GG +I +RK + I + ++E +N+R T+TG
Sbjct: 236 HVTATVAIPAEYVGALLGHGGNRIANLRKYTRTKITV---AQEPNQNNEREFTITGNDQK 292
Query: 320 AIALAQYLI 328
++ LAQ +I
Sbjct: 293 SVKLAQNMI 301
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP-D 764
+T + +P E +GA++G GG +I +RK + I + ++E +N+R T+TG
Sbjct: 236 HVTATVAIPAEYVGALLGHGGNRIANLRKYTRTKITV---AQEPNQNNEREFTITGNDQK 292
Query: 765 AIALAQYLI 773
++ LAQ +I
Sbjct: 293 SVKLAQNMI 301
Score = 33.1 bits (74), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 276 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA--LAQYLINMSVE 333
++G+GG I IRK +G I IS +E+ +DR + +TG+ DA+A LA V+
Sbjct: 47 ILGRGGNTIDNIRKANGVKIGIST---KEKSCSDRLLEVTGSIDAVANSLADV-----VK 98
Query: 334 LLRANLNGEGGGE 346
+L A+ E E
Sbjct: 99 VLTADDTNEEDAE 111
Score = 33.1 bits (74), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 721 VIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA--LAQYLINMSVE 778
++G+GG I IRK +G I IS +E+ +DR + +TG+ DA+A LA V+
Sbjct: 47 ILGRGGNTIDNIRKANGVKIGIST---KEKSCSDRLLEVTGSIDAVANSLADV-----VK 98
Query: 779 LLRANLNGEGGGE 791
+L A+ E E
Sbjct: 99 VLTADDTNEEDAE 111
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE-- 61
VG IIG+ GE + K++++SG K+ IS S PER V++ G+ +S+ +A ++ +
Sbjct: 157 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 216
Query: 62 ------EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+FH N N G NG Q I ++PA + G +IGKGG IK ++E +G + +
Sbjct: 217 RGGPPGQFHDNANG--GQNGTVQEI----MIPAGKAGLVIGKGGETIKQLQERAGVKMIL 270
Query: 116 ASDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 150
D N+ ++ + I G P V QA C +++D
Sbjct: 271 IQDGSQNTNVDKPLRIIGDPYKVQQA----CEMVMD 302
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE-- 506
VG IIG+ GE + K++++SG K+ IS S PER V++ G+ +S+ +A ++ +
Sbjct: 157 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 216
Query: 507 ------EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+FH N N G NG Q I ++PA + G +IGKGG IK ++E +G + +
Sbjct: 217 RGGPPGQFHDNANG--GQNGTVQEI----MIPAGKAGLVIGKGGETIKQLQERAGVKMIL 270
Query: 561 ASDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 595
D N+ ++ + I G P V QA C +++D
Sbjct: 271 IQDGSQNTNVDKPLRIIGDPYKVQQA----CEMVMD 302
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+SGE +KK++ ++G +I D + PE+I ++G D A +I ++
Sbjct: 335 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 394
Query: 64 HKNQNKHLGGNGESQLI---------------QLRLIVPASQCGSIIGKGGSQIKTIRET 108
G G ++ +P +CG +IG+GG +K I +
Sbjct: 395 RSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 454
Query: 109 SGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
+GA V ++ + PN + I+G P + A
Sbjct: 455 TGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHA 488
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+SGE +KK++ ++G +I D + PE+I ++G D A +I ++
Sbjct: 335 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 394
Query: 509 HKNQNKHLGGNGESQLI---------------QLRLIVPASQCGSIIGKGGSQIKTIRET 553
G G ++ +P +CG +IG+GG +K I +
Sbjct: 395 RSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 454
Query: 554 SGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
+GA V ++ + PN + I+G P + A
Sbjct: 455 TGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHA 488
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G +IGK GET+K+L+E +G K+ + S ++ ++ + +IG + +A ++ +
Sbjct: 245 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDIL 304
Query: 61 EEFHKNQNKHLGGNGESQLIQLR------LIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
E + GG G+ R + VP G +IG+ G IK I+ +G +
Sbjct: 305 RE------RDQGGFGDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ 358
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQA 140
D E+ +I G PD A
Sbjct: 359 FKQDDG-TGPEKIAHIMGPPDRCEHA 383
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R++++TG P+++
Sbjct: 146 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS---GGLPERSVSLTGAPESV 202
Query: 322 ALAQYLIN 329
A+ +++
Sbjct: 203 QKAKMMLD 210
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R++++TG P+++
Sbjct: 146 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS---GGLPERSVSLTGAPESV 202
Query: 767 ALAQYLIN 774
A+ +++
Sbjct: 203 QKAKMMLD 210
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 265 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
EMT +P G VIG+GG + I + +GA + IS+ D N + + G+P I
Sbjct: 427 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQID 486
Query: 323 LAQYLINMSVE 333
A+ LI +E
Sbjct: 487 HAKQLIEEKIE 497
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 710 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
EMT +P G VIG+GG + I + +GA + IS+ D N + + G+P I
Sbjct: 427 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQID 486
Query: 768 LAQYLINMSVE 778
A+ LI +E
Sbjct: 487 HAKQLIEEKIE 497
Score = 40.8 bits (94), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP G IIG+GG QI I++ SG V ++ D LP ER V++ G P++V +A
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ERSVSLTGAPESVQKA 205
Score = 33.1 bits (74), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSNDRTITMTGT 317
QN +E+ +P G VIGKGG I ++++ +G MI I S+ + D+ + + G
Sbjct: 232 QNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNT--NVDKPLRIIGD 289
Query: 318 PDAIALAQYLINMSVELLRANLNGEGGGESN 348
P + Q M +++LR G G G+ N
Sbjct: 290 PYKV---QQACEMVMDILRERDQG-GFGDRN 316
Score = 33.1 bits (74), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 704 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSNDRTITMTGT 762
QN +E+ +P G VIGKGG I ++++ +G MI I S+ + D+ + + G
Sbjct: 232 QNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNT--NVDKPLRIIGD 289
Query: 763 PDAIALAQYLINMSVELLRANLNGEGGGESN 793
P + Q M +++LR G G G+ N
Sbjct: 290 PYKV---QQACEMVMDILRERDQG-GFGDRN 316
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE-- 61
VG IIG+ GE + K++++SG K+ IS S PER V++ G+ +S+ +A ++ +
Sbjct: 157 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 216
Query: 62 ------EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+FH N N G NG Q I ++PA + G +IGKGG IK ++E +G + +
Sbjct: 217 RGGPPGQFHDNANG--GQNGTVQEI----MIPAGKAGLVIGKGGETIKQLQERAGVKMIL 270
Query: 116 ASDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 150
D N+ ++ + I G P V QA C +++D
Sbjct: 271 IQDGSQNTNVDKPLRIIGDPYKVQQA----CEMVMD 302
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE-- 506
VG IIG+ GE + K++++SG K+ IS S PER V++ G+ +S+ +A ++ +
Sbjct: 157 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 216
Query: 507 ------EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+FH N N G NG Q I ++PA + G +IGKGG IK ++E +G + +
Sbjct: 217 RGGPPGQFHDNANG--GQNGTVQEI----MIPAGKAGLVIGKGGETIKQLQERAGVKMIL 270
Query: 561 ASDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 595
D N+ ++ + I G P V QA C +++D
Sbjct: 271 IQDGSQNTNVDKPLRIIGDPYKVQQA----CEMVMD 302
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+SGE +KK++ ++G +I D + PE+I ++G D A +I ++
Sbjct: 335 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 394
Query: 64 HKNQNKHLGGNGESQLI---------------QLRLIVPASQCGSIIGKGGSQIKTIRET 108
G G ++ +P +CG +IG+GG +K I +
Sbjct: 395 RSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 454
Query: 109 SGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
+GA V ++ + PN + I+G P + A
Sbjct: 455 TGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHA 488
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+SGE +KK++ ++G +I D + PE+I ++G D A +I ++
Sbjct: 335 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 394
Query: 509 HKNQNKHLGGNGESQLI---------------QLRLIVPASQCGSIIGKGGSQIKTIRET 553
G G ++ +P +CG +IG+GG +K I +
Sbjct: 395 RSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 454
Query: 554 SGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
+GA V ++ + PN + I+G P + A
Sbjct: 455 TGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHA 488
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G +IGK GET+K+L+E +G K+ + S ++ ++ + +IG + +A ++ +
Sbjct: 245 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDIL 304
Query: 61 EEFHKNQNKHLGGNGESQLIQLR------LIVPASQCGSIIGKGGSQIKTIRETSGASVY 114
E + GG G+ R + VP G +IG+ G IK I+ +G +
Sbjct: 305 RE------RDQGGFGDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ 358
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQA 140
D E+ +I G PD A
Sbjct: 359 FKQDDG-TGPEKIAHIMGPPDRCEHA 383
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R++++TG P+++
Sbjct: 146 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS---GGLPERSVSLTGAPESV 202
Query: 322 ALAQYLIN 329
A+ +++
Sbjct: 203 QKAKMMLD 210
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R++++TG P+++
Sbjct: 146 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS---GGLPERSVSLTGAPESV 202
Query: 767 ALAQYLIN 774
A+ +++
Sbjct: 203 QKAKMMLD 210
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 265 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
EMT +P G VIG+GG + I + +GA + IS+ D N + + G+P I
Sbjct: 427 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQID 486
Query: 323 LAQYLINMSVE 333
A+ LI +E
Sbjct: 487 HAKQLIEEKIE 497
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 710 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
EMT +P G VIG+GG + I + +GA + IS+ D N + + G+P I
Sbjct: 427 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQID 486
Query: 768 LAQYLINMSVE 778
A+ LI +E
Sbjct: 487 HAKQLIEEKIE 497
Score = 40.8 bits (94), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP G IIG+GG QI I++ SG V ++ D LP ER V++ G P++V +A
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ERSVSLTGAPESVQKA 205
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE-- 61
VG IIG+ GE + K++++SG K+ IS S PER V++ G+ +S+ +A ++ +
Sbjct: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
Query: 62 ------EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+FH N N G NG Q I ++PA + G +IGKGG IK ++E +G + +
Sbjct: 216 RGGPPGQFHDNANG--GQNGTVQEI----MIPAGKAGLVIGKGGETIKQLQERAGVKMIL 269
Query: 116 ASDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 150
D N+ ++ + I G P V QA C +++D
Sbjct: 270 IQDGSQNTNVDKPLRIIGDPYKVQQA----CEMVMD 301
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 21/156 (13%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE-- 506
VG IIG+ GE + K++++SG K+ IS S PER V++ G+ +S+ +A ++ +
Sbjct: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
Query: 507 ------EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+FH N N G NG Q I ++PA + G +IGKGG IK ++E +G + +
Sbjct: 216 RGGPPGQFHDNANG--GQNGTVQEI----MIPAGKAGLVIGKGGETIKQLQERAGVKMIL 269
Query: 561 ASDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 595
D N+ ++ + I G P V QA C +++D
Sbjct: 270 IQDGSQNTNVDKPLRIIGDPYKVQQA----CEMVMD 301
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+SGE +KK++ ++G +I D + PE+I ++G D A +I ++
Sbjct: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
Query: 64 HKNQNKHLGGNGESQLI---------------QLRLIVPASQCGSIIGKGGSQIKTIRET 108
GG G ++ +P +CG +IG+GG +K I +
Sbjct: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
Query: 109 SGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
+GA V ++ + PN + I+G P + A
Sbjct: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHA 487
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+SGE +KK++ ++G +I D + PE+I ++G D A +I ++
Sbjct: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
Query: 509 HKNQNKHLGGNGESQLI---------------QLRLIVPASQCGSIIGKGGSQIKTIRET 553
GG G ++ +P +CG +IG+GG +K I +
Sbjct: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
Query: 554 SGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
+GA V ++ + PN + I+G P + A
Sbjct: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHA 487
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITKNI 60
+ G +IGK GET+K+L+E +G K+ + S ++ ++ + +IG + +A ++ +
Sbjct: 244 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDIL 303
Query: 61 EEFHKNQNKHLGGNGESQLIQLRL------IVPASQCGSIIGKGGSQIKTIRETSGASVY 114
E + GG G+ R+ VP G +IG+ G IK I+ +G +
Sbjct: 304 RE------RDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ 357
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQA 140
D E+ +I G PD A
Sbjct: 358 FKQDDG-TGPEKIAHIMGPPDRCEHA 382
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 450 EVGSIIGKSGETVKKLREESGSKIYI----SDSSTPERIVTVIGSMDSLFRAFSLITKNI 505
+ G +IGK GET+K+L+E +G K+ + S ++ ++ + +IG + +A ++ +
Sbjct: 244 KAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDIL 303
Query: 506 EEFHKNQNKHLGGNGESQLIQLRL------IVPASQCGSIIGKGGSQIKTIRETSGASVY 559
E + GG G+ R+ VP G +IG+ G IK I+ +G +
Sbjct: 304 RE------RDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ 357
Query: 560 VASDMLPNSTEREVNIKGVPDAVTQA 585
D E+ +I G PD A
Sbjct: 358 FKQDDG-TGPEKIAHIMGPPDRCEHA 382
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R++++TG P+++
Sbjct: 145 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS---GGLPERSVSLTGAPESV 201
Query: 322 ALAQYLIN 329
A+ +++
Sbjct: 202 QKAKMMLD 209
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R++++TG P+++
Sbjct: 145 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS---GGLPERSVSLTGAPESV 201
Query: 767 ALAQYLIN 774
A+ +++
Sbjct: 202 QKAKMMLD 209
Score = 42.0 bits (97), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 265 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
EMT +P G VIG+GG + I + +GA + IS+ D N + + G+P I
Sbjct: 426 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQID 485
Query: 323 LAQYLINMSVE 333
A+ LI +E
Sbjct: 486 HAKQLIEEKIE 496
Score = 42.0 bits (97), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 710 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
EMT +P G VIG+GG + I + +GA + IS+ D N + + G+P I
Sbjct: 426 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQID 485
Query: 768 LAQYLINMSVE 778
A+ LI +E
Sbjct: 486 HAKQLIEEKIE 496
Score = 40.8 bits (94), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 58 KNIEEFHKNQNKHLGGNGESQLIQLRLI-------------VPASQCGSIIGKGGSQIKT 104
+ +E+ + ++K L G+S QL I VP G IIG+GG QI
Sbjct: 110 RQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINK 169
Query: 105 IRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
I++ SG V ++ D LP ER V++ G P++V +A
Sbjct: 170 IQQDSGCKVQISPDSGGLP---ERSVSLTGAPESVQKA 204
Score = 40.8 bits (94), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 503 KNIEEFHKNQNKHLGGNGESQLIQLRLI-------------VPASQCGSIIGKGGSQIKT 549
+ +E+ + ++K L G+S QL I VP G IIG+GG QI
Sbjct: 110 RQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINK 169
Query: 550 IRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 585
I++ SG V ++ D LP ER V++ G P++V +A
Sbjct: 170 IQQDSGCKVQISPDSGGLP---ERSVSLTGAPESVQKA 204
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 22/155 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I++ I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTA 324
Query: 64 HKNQ----------------NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+ + +G G Q ++ VPA +CG +IGKGG IK+I +
Sbjct: 325 QERDGFGGLAAARGRGRGRGDWSVGAPGGVQ--EITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 108 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
SGA V + + PNS R I+GVP + A
Sbjct: 383 QSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVA 417
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 22/155 (14%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG++GE +KK++ ++G +I D +PER V+G D A +I++ I
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTA 324
Query: 509 HKNQ----------------NKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 552
+ + +G G Q ++ VPA +CG +IGKGG IK+I +
Sbjct: 325 QERDGFGGLAAARGRGRGRGDWSVGAPGGVQ--EITYTVPADKCGLVIGKGGENIKSINQ 382
Query: 553 TSGASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
SGA V + + PNS R I+GVP + A
Sbjct: 383 QSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVA 417
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 61
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 62 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 120
H + S + ++ ++PAS+ G +IG+GG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHNDIDSNSTIQEI--LIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPL 204
Query: 121 PNSTEREVNIKGVPDAVTQA 140
P ++ + I G V QA
Sbjct: 205 PTGADKPLRITGDAFKVQQA 224
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYISDSST--PERIVTVIGSMDSLFRAFSLITKNIE 506
K VG IIG+ GE + +++ ESG KI I+ S+ PER + G+ +S+ +A L+ + ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASD-ML 565
H + S + ++ ++PAS+ G +IG+GG IK ++E +G + + D L
Sbjct: 147 RCRNGPGFHNDIDSNSTIQEI--LIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPL 204
Query: 566 PNSTEREVNIKGVPDAVTQA 585
P ++ + I G V QA
Sbjct: 205 PTGADKPLRITGDAFKVQQA 224
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 317 TPDAIALAQYLINMSVELLRANLNGEG 343
TP++I A+ L+ V+ R NG G
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGPG 153
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
Q+ IT+E VP++++G +IG+GG +I I+ SG I+I+ E +R +TG
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAS---ESSGIPERPCVLTG 129
Query: 762 TPDAIALAQYLINMSVELLRANLNGEG 788
TP++I A+ L+ V+ R NG G
Sbjct: 130 TPESIEQAKRLLGQIVDRCR---NGPG 153
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 266 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P I +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVAR 418
Query: 326 YLINMSV 332
LI+ V
Sbjct: 419 QLIDEKV 425
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
TVP + G VIGKGG I I + SGA + + ++ D N R T+ G P I +A+
Sbjct: 359 YTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVAR 418
Query: 771 YLINMSV 777
LI+ V
Sbjct: 419 QLIDEKV 425
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 79 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDA 136
+I VP G IIG+GG QI I+ SG + +AS+ +P ER + G P++
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP---ERPCVLTGTPES 133
Query: 137 VTQA 140
+ QA
Sbjct: 134 IEQA 137
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 524 LIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDA 581
+I VP G IIG+GG QI I+ SG + +AS+ +P ER + G P++
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP---ERPCVLTGTPES 133
Query: 582 VTQA 585
+ QA
Sbjct: 134 IEQA 137
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 22/156 (14%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE-- 61
VG IIG+ GE + K++++SG K+ IS S PER V++ GS +++ +A ++ +
Sbjct: 220 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAVQKAKLMLDDIVSRG 279
Query: 62 ------EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 115
+FH N G NG Q I ++PA + G +IGKGG IK ++E +G +
Sbjct: 280 RGGPPGQFHDYAN---GQNGTVQEI----MIPAGKAGLVIGKGGETIKQLQERAGVKMIF 332
Query: 116 ASDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 150
D N+ ++ + I G P V QA C +++D
Sbjct: 333 IQDGSQNTNVDKPLRIIGDPYKVQQA----CEMVMD 364
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 22/156 (14%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE-- 506
VG IIG+ GE + K++++SG K+ IS S PER V++ GS +++ +A ++ +
Sbjct: 220 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAVQKAKLMLDDIVSRG 279
Query: 507 ------EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV 560
+FH N G NG Q I ++PA + G +IGKGG IK ++E +G +
Sbjct: 280 RGGPPGQFHDYAN---GQNGTVQEI----MIPAGKAGLVIGKGGETIKQLQERAGVKMIF 332
Query: 561 ASDMLPNS-TEREVNIKGVPDAVTQAIYQICLIMVD 595
D N+ ++ + I G P V QA C +++D
Sbjct: 333 IQDGSQNTNVDKPLRIIGDPYKVQQA----CEMVMD 364
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 63
VG +IG+SGE +KK++ ++G +I D + PE+I ++G + A +I ++
Sbjct: 397 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPERCEHAARIINDLLQSL 456
Query: 64 HKNQNKHLGGNGESQLI--------------QLRLIVPASQCGSIIGKGGSQIKTIRETS 109
G ++ +P +CG +IG+GG +K I +
Sbjct: 457 RSGPPGPPGHGMPPGGRGRGRGQGIWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQR 516
Query: 110 GASVYVASDMLPNSTE--REVNIKGVPDAVTQA 140
GA V ++ + PN + I+G P + A
Sbjct: 517 GAFVEISRQLPPNGDPNFKLFIIRGSPQQIEHA 549
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYI--SDSSTPERIVTVIGSMDSLFRAFSLITKNIEEF 508
VG +IG+SGE +KK++ ++G +I D + PE+I ++G + A +I ++
Sbjct: 397 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPERCEHAARIINDLLQSL 456
Query: 509 HKNQNKHLGGNGESQLI--------------QLRLIVPASQCGSIIGKGGSQIKTIRETS 554
G ++ +P +CG +IG+GG +K I +
Sbjct: 457 RSGPPGPPGHGMPPGGRGRGRGQGIWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQR 516
Query: 555 GASVYVASDMLPNSTE--REVNIKGVPDAVTQA 585
GA V ++ + PN + I+G P + A
Sbjct: 517 GAFVEISRQLPPNGDPNFKLFIIRGSPQQIEHA 549
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 9/96 (9%)
Query: 262 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 321
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R++++TG+P+A+
Sbjct: 209 VTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS---GGLPERSVSLTGSPEAV 265
Query: 322 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 357
A+ +++ V G GG D+++ N
Sbjct: 266 QKAKLMLDDIVS------RGRGGPPGQFHDYANGQN 295
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 9/96 (9%)
Query: 707 ITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAI 766
+T+E VP+ ++G +IG+GG +I +I++ SG ++IS S +R++++TG+P+A+
Sbjct: 209 VTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDS---GGLPERSVSLTGSPEAV 265
Query: 767 ALAQYLINMSVELLRANLNGEGGGESNMDDFSSDNN 802
A+ +++ V G GG D+++ N
Sbjct: 266 QKAKLMLDDIVS------RGRGGPPGQFHDYANGQN 295
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 5 EVGSIIGKSGETVKKLREESGSK-IYISDSST---PERIVTVIGSMDSLFRAFSLITKNI 60
+ G +IGK GET+K+L+E +G K I+I D S ++ + +IG + +A ++ +
Sbjct: 307 KAGLVIGKGGETIKQLQERAGVKMIFIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDIL 366
Query: 61 EEFHKNQNKHLGGNGESQLIQLRL------IVPASQCGSIIGKGGSQIKTIRETSGASVY 114
E + GG G+ R+ VP G +IG+ G IK I+ +G +
Sbjct: 367 RE------RDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ 420
Query: 115 VASDMLPNSTEREVNIKGVPDAVTQA 140
D E+ +I G P+ A
Sbjct: 421 FKQDDG-TGPEKIAHIMGPPERCEHA 445
Score = 41.2 bits (95), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 86 VPASQCGSIIGKGGSQIKTIRETSGASVYVASDM--LPNSTEREVNIKGVPDAVTQA 140
VP G IIG+GG QI I++ SG V ++ D LP ER V++ G P+AV +A
Sbjct: 215 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ERSVSLTGSPEAVQKA 268
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 265 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 322
EMT +P G VIG+GG + I + GA + IS+ D N + + G+P I
Sbjct: 488 EMTFSIPTHKCGLVIGRGGENVKAINQQRGAFVEISRQLPPNGDPNFKLFIIRGSPQQIE 547
Query: 323 LAQYLINMSVE 333
A+ I +E
Sbjct: 548 HAKQPIEEKIE 558
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 710 EMT--VPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
EMT +P G VIG+GG + I + GA + IS+ D N + + G+P I
Sbjct: 488 EMTFSIPTHKCGLVIGRGGENVKAINQQRGAFVEISRQLPPNGDPNFKLFIIRGSPQQIE 547
Query: 768 LAQYLINMSVE 778
A+ I +E
Sbjct: 548 HAKQPIEEKIE 558
Score = 33.1 bits (74), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSN-DRTITMTG 316
QN +E+ +P G VIGKGG I ++++ +G MI I S +++N D+ + + G
Sbjct: 294 QNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDGS---QNTNVDKPLRIIG 350
Query: 317 TPDAIALAQYLINMSVELLRANLNGEGGGESN 348
P + Q M +++LR G G G+ N
Sbjct: 351 DPYKV---QQACEMVMDILRERDQG-GFGDRN 378
Score = 33.1 bits (74), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 704 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGA-MIRISKSSEEEEDSN-DRTITMTG 761
QN +E+ +P G VIGKGG I ++++ +G MI I S +++N D+ + + G
Sbjct: 294 QNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDGS---QNTNVDKPLRIIG 350
Query: 762 TPDAIALAQYLINMSVELLRANLNGEGGGESN 793
P + Q M +++LR G G G+ N
Sbjct: 351 DPYKV---QQACEMVMDILRERDQG-GFGDRN 378
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS---DSST--PERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ E+G+KI IS D S PER +TV G++++ A I K +
Sbjct: 286 VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKL 345
Query: 61 EEFHKNQ----NKHLG------------------GNGESQLIQLRLIVPASQCGSIIGKG 98
E +N N H G E +++ L +P G+IIGK
Sbjct: 346 REAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNL--FIPTQAVGAIIGKK 403
Query: 99 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
G+ IK + +GAS+ +A P+ +ER V I G P+A +A
Sbjct: 404 GAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 445
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYIS---DSST--PERIVTVIGSMDSLFRAFSLITKNI 505
VG +IGK G +KK+ E+G+KI IS D S PER +TV G++++ A I K +
Sbjct: 286 VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKL 345
Query: 506 EEFHKNQ----NKHLG------------------GNGESQLIQLRLIVPASQCGSIIGKG 543
E +N N H G E +++ L +P G+IIGK
Sbjct: 346 REAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNL--FIPTQAVGAIIGKK 403
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
G+ IK + +GAS+ +A P+ +ER V I G P+A +A
Sbjct: 404 GAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 445
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 154/371 (41%), Gaps = 56/371 (15%)
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P + Q + +R P + +Q + VP + +GA+IGK G I I K +
Sbjct: 165 PPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQ 224
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI---------------NMSVELLRA 337
+ + I + +E + ++ +T+ TP+ + A +I + +++L
Sbjct: 225 SRVDIHR--KENSGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEIPLKILAH 282
Query: 338 N-----LNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGALNA 392
N L G+ G + + + S+ L L+ NP + +T G + A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISS-LQDLSIYNP--------ERTITVKGTVEA 333
Query: 393 LTS--LSALGGL-----SDLLGGGSSGGGSGN---SGGFGGVPQGPNYANIQTTGVQRRM 442
S + + L +D+L + G + FG P +Y + +
Sbjct: 334 CASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNL---- 389
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFS 499
+ + VG+IIGK G +K+L +G+ I I+ + P ER+V + G ++ F+A
Sbjct: 390 --FIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQG 447
Query: 500 LITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVY 559
I F K + ++ E ++ + VP+S G +IGKGG + ++ + A V
Sbjct: 448 RI------FGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 560 VASDMLPNSTE 570
V D P+ E
Sbjct: 502 VPRDQTPDENE 512
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 72 GGNGESQLIQ--LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
GG +++ I LR++VP G+IIGK G IK I + + + V + + E+ V
Sbjct: 184 GGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVT 243
Query: 130 IKGVPDAVTQAIYQICLIM---VDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ--NSLM 184
I P+ ++A I IM D IP + L N GL+G G + N
Sbjct: 244 IHATPEGTSEACRMILEIMQKEADETKLAEEIPLKILAHN----GLVGRLIGKEGRNLKK 299
Query: 185 GAPDMGNN-PLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ--- 240
+ G ++ L L + G + A AS++++ R +N
Sbjct: 300 IEHETGTKITISSLQDLSIYNPERTITVKG----TVEACASAEIEIMKKLREAFENDMLA 355
Query: 241 -NQHN-------RNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
N H+ +++ GP + Q + +P + +GA+IGK G I ++ + +G
Sbjct: 356 VNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAG 415
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
A I+I+ + E D ++R + +TG P+A AQ
Sbjct: 416 ASIKIAPA--EGPDVSERMVIITGPPEAQFKAQ 446
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 517 GGNGESQLIQ--LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
GG +++ I LR++VP G+IIGK G IK I + + + V + + E+ V
Sbjct: 184 GGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVT 243
Query: 575 IKGVPDAVTQAIYQICLIM---VDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ--NSLM 629
I P+ ++A I IM D IP + L N GL+G G + N
Sbjct: 244 IHATPEGTSEACRMILEIMQKEADETKLAEEIPLKILAHN----GLVGRLIGKEGRNLKK 299
Query: 630 GAPDMGNN-PLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNHMPRNQNQNQ--- 685
+ G ++ L L + G + A AS++++ R +N
Sbjct: 300 IEHETGTKITISSLQDLSIYNPERTITVKG----TVEACASAEIEIMKKLREAFENDMLA 355
Query: 686 -NQHN-------RNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
N H+ +++ GP + Q + +P + +GA+IGK G I ++ + +G
Sbjct: 356 VNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAG 415
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
A I+I+ + E D ++R + +TG P+A AQ
Sbjct: 416 ASIKIAPA--EGPDVSERMVIITGPPEAQFKAQ 446
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G +K+L +G+ I I+ + P ER+V + G ++ F+A I
Sbjct: 396 VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI------ 449
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + ++ E ++ + VP+S G +IGKGG + ++ + A V V D P+
Sbjct: 450 FGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 509
Query: 123 STE 125
E
Sbjct: 510 ENE 512
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T+K + +++ S++ I +S E+ VT+ + + A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEAC 255
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I + ++ K ++ I L+++ G +IGK G +K I +G +
Sbjct: 256 RMILEIMQ-------KEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKI 308
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQI 589
++S D+ + ER + +KG +A A +I
Sbjct: 309 TISSLQDLSIYNPERTITVKGTVEACASAEIEI 341
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T+K + +++ S++ I +S E+ VT+ + + A +I + ++
Sbjct: 205 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEACRMILEIMQ- 263
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
K ++ I L+++ G +IGK G +K I +G + ++S D+
Sbjct: 264 ------KEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS 317
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
+ ER + +KG +A A +I
Sbjct: 318 IYNPERTITVKGTVEACASAEIEI 341
>sp|C5DIR2|HEK2_LACTC Heterogeneous nuclear rnp K-like protein 2 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=HEK2 PE=3 SV=1
Length = 285
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 443 RHIMQGKEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAF-- 498
R ++ KE IIG G T++K+RE S KI IS + +RI++ GS + A
Sbjct: 13 RVLVSLKEAARIIGAQGMTIQKIRESSKVKIGISPHERGCSDRILSCSGSAQGVANAIGD 72
Query: 499 --SLITKNIEEFHKNQNKHLG-----------GNGES--QLIQLRLIVPASQCGSIIGKG 543
++ ++ E + K L + ES ++ LRLIV SQ SIIG
Sbjct: 73 VVEVLNQDDSEPETHSYKPLNFILPAPSATEIQDPESVKRIGNLRLIVSNSQVSSIIGTQ 132
Query: 544 GSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATI 603
GS+IK++ E G V + + LP+S +R V I+G P A+ + I I+ P
Sbjct: 133 GSRIKSLIEKHGVKVVASKNFLPDSQDRVVEIQGFPGAIASCLVDISEILAAEPKPSHEK 192
Query: 604 PYRP 607
Y P
Sbjct: 193 QYYP 196
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGSMDSLFRAF----SLIT 57
KE IIG G T++K+RE S KI IS + +RI++ GS + A ++
Sbjct: 19 KEAARIIGAQGMTIQKIRESSKVKIGISPHERGCSDRILSCSGSAQGVANAIGDVVEVLN 78
Query: 58 KNIEEFHKNQNKHLG-----------GNGES--QLIQLRLIVPASQCGSIIGKGGSQIKT 104
++ E + K L + ES ++ LRLIV SQ SIIG GS+IK+
Sbjct: 79 QDDSEPETHSYKPLNFILPAPSATEIQDPESVKRIGNLRLIVSNSQVSSIIGTQGSRIKS 138
Query: 105 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRP 162
+ E G V + + LP+S +R V I+G P A+ + I I+ P Y P
Sbjct: 139 LIEKHGVKVVASKNFLPDSQDRVVEIQGFPGAIASCLVDISEILAAEPKPSHEKQYYP 196
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
+Q++ +TK++ +P E +GA++G+GG ++ +RK + + +S +EE N+R T+T
Sbjct: 200 SQEEGSVTKDVAIPVEYVGALLGRGGNRVSSLRKYTKTKVIVSDEPDEE---NNRVFTIT 256
Query: 316 G-TPDAIALAQYLI--NMSVELLR 336
G +++ LA+ ++ N+ E R
Sbjct: 257 GNNQNSVKLAETMLLKNLETEKQR 280
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 760
+Q++ +TK++ +P E +GA++G+GG ++ +RK + + +S +EE N+R T+T
Sbjct: 200 SQEEGSVTKDVAIPVEYVGALLGRGGNRVSSLRKYTKTKVIVSDEPDEE---NNRVFTIT 256
Query: 761 G-TPDAIALAQYLI--NMSVELLR 781
G +++ LA+ ++ N+ E R
Sbjct: 257 GNNQNSVKLAETMLLKNLETEKQR 280
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 152/363 (41%), Gaps = 63/363 (17%)
Query: 259 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 318
Q+ + + VP + +GA+IGK G I I K + + I I + +E + ++ IT+ TP
Sbjct: 192 QSDVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHR--KENAGAAEKPITVHSTP 249
Query: 319 DAI--ALAQYLINMSVELLRANLNGE----------------GGGESNMDDFSSDNNLP- 359
+ A + M E + + E G N+ D +
Sbjct: 250 EGCSSACRNIMEIMQKEAIDTKITEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKI 309
Query: 360 SSAPLAGLNASNP---------LAAALPQLAQILTK--------PGALNALT------SL 396
+ +PL L NP L A +I+ K A++ + +L
Sbjct: 310 TISPLQDLTLYNPERTITVKGTLDACAKAEEEIMKKVRESYENDVAAMHLQSNLIPGLNL 369
Query: 397 SALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQ---RRMRHIMQGKEVGS 453
+ALG L G +SGG S + G P G A Q+ G Q + + VG+
Sbjct: 370 NALG----LFPGAASGGISPSV--VSGPPPGAQ-AGYQSFGAQMESETVHLFIPALAVGA 422
Query: 454 IIGKSGETVKKLREESGSKIYISDS---STPERIVTVIGSMDSLFRAFSLITKNIEEFHK 510
IIGK G+ +K+L +G+ I I+ + +R+V + G ++ F+A I F K
Sbjct: 423 IIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMVIISGPPEAQFKAQGRI------FGK 476
Query: 511 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 570
+ ++ G E ++ + VP+ G +IGKGG + ++ + A V V D P+ +
Sbjct: 477 LKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPDEND 536
Query: 571 REV 573
+ V
Sbjct: 537 QVV 539
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 52/185 (28%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ +++ +KI IS PER +TV G++D+ +A I K +
Sbjct: 287 VGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGTLDACAKAEEEIMKKV 346
Query: 61 EEFHKNQ---------------------------------------------NKHLGGNG 75
E ++N + G
Sbjct: 347 RESYENDVAAMHLQSNLIPGLNLNALGLFPGAASGGISPSVVSGPPPGAQAGYQSFGAQM 406
Query: 76 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 135
ES+ + L +PA G+IIGK G IK + +GAS+ +A ++ +R V I G P+
Sbjct: 407 ESETVH--LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMVIISGPPE 464
Query: 136 AVTQA 140
A +A
Sbjct: 465 AQFKA 469
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 52/185 (28%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 505
VG +IGK G +KK+ +++ +KI IS PER +TV G++D+ +A I K +
Sbjct: 287 VGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGTLDACAKAEEEIMKKV 346
Query: 506 EEFHKNQ---------------------------------------------NKHLGGNG 520
E ++N + G
Sbjct: 347 RESYENDVAAMHLQSNLIPGLNLNALGLFPGAASGGISPSVVSGPPPGAQAGYQSFGAQM 406
Query: 521 ESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPD 580
ES+ + L +PA G+IIGK G IK + +GAS+ +A ++ +R V I G P+
Sbjct: 407 ESETVHL--FIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMVIISGPPE 464
Query: 581 AVTQA 585
A +A
Sbjct: 465 AQFKA 469
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS---TPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L +G+ I I+ + +R+V + G ++ F+A I
Sbjct: 420 VGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMVIISGPPEAQFKAQGRI------ 473
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + ++ G E ++ + VP+ G +IGKGG + ++ + A V V D P+
Sbjct: 474 FGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPRDQTPD 533
Query: 123 STEREV 128
++ V
Sbjct: 534 ENDQVV 539
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T++ + +++ SKI I ++ E+ +TV + + A
Sbjct: 197 LRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGCSSA- 255
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+NI E K ++ I L+++ + G +IGK G +K I + + +
Sbjct: 256 ---CRNIMEI---MQKEAIDTKITEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKI 309
Query: 559 YVA--SDMLPNSTEREVNIKGVPDAVTQAIYQI 589
++ D+ + ER + +KG DA +A +I
Sbjct: 310 TISPLQDLTLYNPERTITVKGTLDACAKAEEEI 342
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T++ + +++ SKI I ++ E+ +TV + + A +NI E
Sbjct: 206 VGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGCSSA----CRNIME 261
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDML 120
K ++ I L+++ + G +IGK G +K I + + + ++ D+
Sbjct: 262 I---MQKEAIDTKITEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLT 318
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
+ ER + +KG DA +A +I
Sbjct: 319 LYNPERTITVKGTLDACAKAEEEI 342
Score = 37.7 bits (86), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
+ LRL+VP G+IIGK G+ I+ I + + + + + + E+ + + P+ +
Sbjct: 195 VPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGCSS 254
Query: 140 AIYQICLIM 148
A I IM
Sbjct: 255 ACRNIMEIM 263
Score = 37.7 bits (86), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
+ LRL+VP G+IIGK G+ I+ I + + + + + + E+ + + P+ +
Sbjct: 195 VPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGCSS 254
Query: 585 AIYQICLIM 593
A I IM
Sbjct: 255 ACRNIMEIM 263
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 708 TKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIA 767
T + +P +GA+IGK G I ++ + +GA I+I+ + + D+ R + ++G P+A
Sbjct: 410 TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPA--DGIDAKQRMVIISGPPEAQF 467
Query: 768 LAQ 770
AQ
Sbjct: 468 KAQ 470
Score = 34.3 bits (77), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 704 QNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP 763
Q+ + + VP + +GA+IGK G I I K + + I I + +E + ++ IT+ TP
Sbjct: 192 QSDVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHR--KENAGAAEKPITVHSTP 249
Query: 764 D 764
+
Sbjct: 250 E 250
Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT-MT 315
+++ ++ + VP+ G VIGKGG + E++ ++ A + + + ++ D ND+ + +T
Sbjct: 486 KEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPR--DQTPDENDQVVVKIT 543
Query: 316 GTPDAIALAQYLINMSVELLR 336
G A LAQ I + +R
Sbjct: 544 GHFYASQLAQRKIQEIISQVR 564
Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTIT-MT 760
+++ ++ + VP+ G VIGKGG + E++ ++ A + + + ++ D ND+ + +T
Sbjct: 486 KEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPR--DQTPDENDQVVVKIT 543
Query: 761 GTPDAIALAQYLINMSVELLR 781
G A LAQ I + +R
Sbjct: 544 GHFYASQLAQRKIQEIISQVR 564
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 40/204 (19%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDS 493
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 108
Query: 494 LFRAFSLITKNIEEFHKNQNK---------HLGGNGE----------------------- 521
L I + I E +N K N +
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTT 168
Query: 522 SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVP 579
S+ Q+++IVP S G IIGKGG+ +K I E SGA V ++ D + N ER V + G P
Sbjct: 169 SRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEP 227
Query: 580 DAVTQAIYQICLIMVDSPPKGATI 603
+ +A+ I + + P G+ +
Sbjct: 228 EQNRKAVELIIQKIQEDPQSGSCL 251
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 425 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 484
Query: 325 QYLINMSV 332
QYLI +
Sbjct: 485 QYLITQRI 492
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 425 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 484
Query: 770 QYLINMSV 777
QYLI +
Sbjct: 485 QYLITQRI 492
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 40/191 (20%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNIE 61
GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++L I + I
Sbjct: 62 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIR 121
Query: 62 EFHKNQNK---------HLGGNGE-----------------------SQLIQLRLIVPAS 89
E +N K N + S+ Q+++IVP S
Sbjct: 122 EMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNS 181
Query: 90 QCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLI 147
G IIGKGG+ +K I E SGA V ++ D + N ER V + G P+ +A+ I
Sbjct: 182 TAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELIIQK 240
Query: 148 MVDSPPKGATI 158
+ + P G+ +
Sbjct: 241 IQEDPQSGSCL 251
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 250 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 308
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 309 DRTITMTGTPDAIALAQYLINMSVELLRANL 339
+R + GT +A+ I + + N+
Sbjct: 97 ERVCLIQGTIEALNAVHGFIAEKIREMPQNV 127
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 695 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSN 753
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SKS + +
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 96
Query: 754 DRTITMTGTPDAIALAQYLINMSVELLRANL 784
+R + GT +A+ I + + N+
Sbjct: 97 ERVCLIQGTIEALNAVHGFIAEKIREMPQNV 127
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 131
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 132 GVPDAV 137
G +A+
Sbjct: 104 GTIEAL 109
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV--ASDMLPNSTEREVNIK 576
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER I+
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 103
Query: 577 GVPDAV 582
G +A+
Sbjct: 104 GTIEAL 109
Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 435 TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGS 490
TT +++ I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G
Sbjct: 167 TTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGE 226
Query: 491 MDSLFRAFSLITKNIEE 507
+ +A LI + I+E
Sbjct: 227 PEQNRKAVELIIQKIQE 243
Score = 40.0 bits (92), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 483
Query: 140 AIYQIC 145
A Y I
Sbjct: 484 AQYLIT 489
Score = 40.0 bits (92), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 483
Query: 585 AIYQIC 590
A Y I
Sbjct: 484 AQYLIT 489
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 660 NAAALAALASSQLKTNHMPRNQNQNQNQHNRNNRDGPSQK-TNQQQNQITKEMTVPNELI 718
N A ++ Q +T P Q + PS T + NQ+ ++ VPN
Sbjct: 126 NVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQV--KIIVPNSTA 183
Query: 719 GAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
G +IGKGG + I + SGA +++S+ + + +R +T++G P+
Sbjct: 184 GLIIGKGGATVKAIMEQSGAWVQLSQKP-DGINLQERVVTVSGEPE 228
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 428 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 487
Query: 325 QYLINMSV 332
QYLI +
Sbjct: 488 QYLITQRI 495
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
E+ VP L+GA++GKGG + E ++++GA I+ISK E + +R +T+TGTP A A
Sbjct: 428 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAA 487
Query: 770 QYLINMSV 777
QYLI +
Sbjct: 488 QYLITQRI 495
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 43/207 (20%)
Query: 439 QRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSS--------TPERIVTVIGS 490
Q ++ ++ GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G+
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGT 108
Query: 491 MDSLFRAFSLITKNIEEFHKNQNK---------HLGGNGE-------------------- 521
+++L I + I E +N K N +
Sbjct: 109 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 168
Query: 522 ---SQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIK 576
S+ Q+++IVP S G IIGKGG+ +K + E SGA V ++ D + N ER V +
Sbjct: 169 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQERVVTVS 227
Query: 577 GVPDAVTQAIYQICLIMVDSPPKGATI 603
G P+ +A+ I + + P G+ +
Sbjct: 228 GEPEQNRKAVELIIQKIQEDPQSGSCL 254
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 43/194 (22%)
Query: 7 GSIIGKSGETVKKLREESGSKIYISDSS--------TPERIVTVIGSMDSLFRAFSLITK 58
GSIIGK G+T+ +L++E+G+ I +S S T ER+ + G++++L I +
Sbjct: 62 GSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAE 121
Query: 59 NIEEFHKNQNK---------HLGGNGE-----------------------SQLIQLRLIV 86
I E +N K N + S+ Q+++IV
Sbjct: 122 KIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIV 181
Query: 87 PASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQAIYQI 144
P S G IIGKGG+ +K + E SGA V ++ D + N ER V + G P+ +A+ I
Sbjct: 182 PNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVELI 240
Query: 145 CLIMVDSPPKGATI 158
+ + P G+ +
Sbjct: 241 IQKIQEDPQSGSCL 254
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 74 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-----ASDMLPNSTEREV 128
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVC 103
Query: 129 NIKGVPDAV 137
I+G +A+
Sbjct: 104 LIQGTVEAL 112
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 519 NGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYV-----ASDMLPNSTEREV 573
GE L++++P+ GSIIGKGG I +++ +GA++ + + D P +TER
Sbjct: 44 TGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVC 103
Query: 574 NIKGVPDAV 582
I+G +A+
Sbjct: 104 LIQGTVEAL 112
Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 435 TTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDS----STPERIVTVIGS 490
TT +++ I+ G IIGK G TVK + E+SG+ + +S + ER+VTV G
Sbjct: 170 TTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGE 229
Query: 491 MDSLFRAFSLITKNIEE 507
+ +A LI + I+E
Sbjct: 230 PEQNRKAVELIIQKIQE 246
Score = 40.0 bits (92), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 139
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 486
Query: 140 AIYQIC 145
A Y I
Sbjct: 487 AQYLIT 492
Score = 40.0 bits (92), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DMLPNSTEREVNIKGVPDAVTQ 584
+ + VP + G+I+GKGG + +E +GA + ++ + +P + R+V I G P A
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 486
Query: 585 AIYQIC 590
A Y I
Sbjct: 487 AQYLIT 492
Score = 40.0 bits (92), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 250 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE--- 305
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SK S+ ++
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYP 96
Query: 306 DSNDRTITMTGTPDAIALAQYLINMSVELLRANL 339
+ +R + GT +A+ I + + N+
Sbjct: 97 GTTERVCLIQGTVEALNAVHGFIAEKIREMPQNV 130
Score = 40.0 bits (92), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 695 GPSQKTNQQQN-QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEE--- 750
G +++TN ++ Q ++ +P+ G++IGKGG I +++K +GA I++SK S+ ++
Sbjct: 37 GSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYP 96
Query: 751 DSNDRTITMTGTPDAIALAQYLINMSVELLRANL 784
+ +R + GT +A+ I + + N+
Sbjct: 97 GTTERVCLIQGTVEALNAVHGFIAEKIREMPQNV 130
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 43/178 (24%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ +++ +KI IS PER +TV GS+++ A I K +
Sbjct: 291 VGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCLAEQEIMKKV 350
Query: 61 EEFHKN------QNKHL--------------------------------GGNGESQLIQL 82
E + N Q HL G G S+ +
Sbjct: 351 REAYDNDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPGPPYGPMGASEQETV 410
Query: 83 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
+ +PA G++IGK G IK + +GAS+ +A P+S R V + G P+A +A
Sbjct: 411 HVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGPPEAQFKA 468
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 43/178 (24%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYIS-----DSSTPERIVTVIGSMDSLFRAFSLITKNI 505
VG +IGK G +KK+ +++ +KI IS PER +TV GS+++ A I K +
Sbjct: 291 VGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCLAEQEIMKKV 350
Query: 506 EEFHKN------QNKHL--------------------------------GGNGESQLIQL 527
E + N Q HL G G S+ +
Sbjct: 351 REAYDNDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPGPPYGPMGASEQETV 410
Query: 528 RLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+ +PA G++IGK G IK + +GAS+ +A P+S R V + G P+A +A
Sbjct: 411 HVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGPPEAQFKA 468
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 153/363 (42%), Gaps = 60/363 (16%)
Query: 255 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 314
+ Q I + VP + +GA+IGK G I I K + + I + + +E + ++ I++
Sbjct: 192 SKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHR--KENAGAAEKPISI 249
Query: 315 TGTPDAIALAQYLI---------------NMSVELLRAN-----LNGEGGGESNMDDFSS 354
TP+ + A +I + +++L N L G+ G N+
Sbjct: 250 HSTPEGCSAACRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLIGKEG--RNLKKVEQ 307
Query: 355 DNNLPSS-APLAGLNASNP---------LAAALPQLAQILTKP--------GALNALTSL 396
D + + +PL L NP + A +I+ K A+N T L
Sbjct: 308 DTDTKITISPLQDLTLYNPERTITVKGSIEACCLAEQEIMKKVREAYDNDIAAMNQQTHL 367
Query: 397 SA---LGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGKEVGS 453
LG + L S+ G P GP A+ Q T + + + VG+
Sbjct: 368 IPGLNLGAIG-LFPPSSAMPPPALGNSVPGPPYGPMGASEQET-----VHVYIPAQAVGA 421
Query: 454 IIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEEFHK 510
+IGK G+ +K+L +G+ I I+ + P+ R+V V G ++ F+A I ++E
Sbjct: 422 LIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGPPEAQFKAQGRIYGKLKE--- 478
Query: 511 NQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTE 570
++ G E ++ + V A+ G +IGKGG + ++ + A V V + P+ +
Sbjct: 479 ---ENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPREQTPDEHD 535
Query: 571 REV 573
+ +
Sbjct: 536 QVI 538
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG++IGK G+ +K+L +G+ I I+ + P+ R+V V G ++ F+A I ++E
Sbjct: 419 VGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGPPEAQFKAQGRIYGKLKE 478
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ G E ++ + V A+ G +IGKGG + ++ + A V V + P+
Sbjct: 479 ------ENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPREQTPD 532
Query: 123 STEREV 128
++ +
Sbjct: 533 EHDQVI 538
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 705 NQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
Q T + +P + +GA+IGK G I ++ + +GA I+I+ + E DS R + +TG P+
Sbjct: 406 EQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPA--EAPDSKMRMVIVTGPPE 463
Query: 765 AIALAQ 770
A AQ
Sbjct: 464 AQFKAQ 469
Score = 40.4 bits (93), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I LRL+VP G+IIGK G+ I+ I + + + + V + E+ ++I P+ +
Sbjct: 199 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCSA 258
Query: 140 AIYQICLIM 148
A I IM
Sbjct: 259 ACRMILEIM 267
Score = 40.4 bits (93), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I LRL+VP G+IIGK G+ I+ I + + + + V + E+ ++I P+ +
Sbjct: 199 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCSA 258
Query: 585 AIYQICLIM 593
A I IM
Sbjct: 259 ACRMILEIM 267
Score = 40.4 bits (93), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 423 GVPQGPNYANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSS 479
G+P +A+I +R ++ + VG+IIGK G T++ + +++ SKI + ++
Sbjct: 189 GIPSKHQHADIP-------LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 241
Query: 480 TPERIVTVIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSI 539
E+ +++ + + A +I + + N+ + + L+++ + G +
Sbjct: 242 AAEKPISIHSTPEGCSAACRMILEIM-------NQEAKDTKTADEVPLKVLAHNNFVGRL 294
Query: 540 IGKGGSQIKTIRETSGASVYVA--SDMLPNSTEREVNIKGVPDAVTQAIYQI 589
IGK G +K + + + + ++ D+ + ER + +KG +A A +I
Sbjct: 295 IGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCLAEQEI 346
Score = 37.7 bits (86), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T++ + +++ SKI + ++ E+ +++ + + A +I + +
Sbjct: 210 VGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCSAACRMILEIM-- 267
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDML 120
N+ + + L+++ + G +IGK G +K + + + + ++ D+
Sbjct: 268 -----NQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLT 322
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
+ ER + +KG +A A +I
Sbjct: 323 LYNPERTITVKGSIEACCLAEQEI 346
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 700 TNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITM 759
+ Q I + VP + +GA+IGK G I I K + + I + + +E + ++ I++
Sbjct: 192 SKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHR--KENAGAAEKPISI 249
Query: 760 TGTPDAIALAQYLI 773
TP+ + A +I
Sbjct: 250 HSTPEGCSAACRMI 263
>sp|Q6CNI6|HEK2_KLULA Heterogeneous nuclear rnp K-like protein 2 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=HEK2 PE=3 SV=1
Length = 383
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGS----MDSLFRAFSLIT 57
KE IIG G T++ +R E+ KI IS + S +R++ V G +SL + ++T
Sbjct: 68 KEAAKIIGPQGNTIETIRRENDIKIGISPREKSCSDRLLNVSGPPRQVANSLGQVLRVLT 127
Query: 58 KNIEEFHKNQNKHL-------------GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 104
+ E ++ KHL Q+ LRLI Q S+IG+ G++IK
Sbjct: 128 TDYEP-EEHVFKHLRFMLPPASKEEIEDPEKWKQIGNLRLICTNPQISSVIGQQGAKIKK 186
Query: 105 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 164
+ ET + + LP+S +R + I+G P +V I +I + + +P R LP
Sbjct: 187 LIETHTVKLVASKHFLPDSKDRVLEIQGFPTSVANCINEIAELFIQD---DVHVPPRTLP 243
Query: 165 Q 165
+
Sbjct: 244 R 244
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 449 KEVGSIIGKSGETVKKLREESGSKIYIS--DSSTPERIVTVIGS----MDSLFRAFSLIT 502
KE IIG G T++ +R E+ KI IS + S +R++ V G +SL + ++T
Sbjct: 68 KEAAKIIGPQGNTIETIRRENDIKIGISPREKSCSDRLLNVSGPPRQVANSLGQVLRVLT 127
Query: 503 KNIEEFHKNQNKHL-------------GGNGESQLIQLRLIVPASQCGSIIGKGGSQIKT 549
+ E ++ KHL Q+ LRLI Q S+IG+ G++IK
Sbjct: 128 TDYEP-EEHVFKHLRFMLPPASKEEIEDPEKWKQIGNLRLICTNPQISSVIGQQGAKIKK 186
Query: 550 IRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLP 609
+ ET + + LP+S +R + I+G P +V I +I + + +P R LP
Sbjct: 187 LIETHTVKLVASKHFLPDSKDRVLEIQGFPTSVANCINEIAELFIQD---DVHVPPRTLP 243
Query: 610 Q 610
+
Sbjct: 244 R 244
Score = 40.8 bits (94), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 261 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP-D 319
Q+++ + +P E +GA++G GG +I +RK + I I + E + DR T+ G
Sbjct: 256 QVSQTLAIPKEFVGALLGVGGNRIANLRKFTKTKIVIGQDPTE---NGDRIFTVWGNDQK 312
Query: 320 AIALAQYLI--NMSVELLR 336
++ LAQ ++ N+ VE R
Sbjct: 313 SVKLAQTMLLKNLEVEKKR 331
Score = 40.8 bits (94), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 706 QITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTP-D 764
Q+++ + +P E +GA++G GG +I +RK + I I + E + DR T+ G
Sbjct: 256 QVSQTLAIPKEFVGALLGVGGNRIANLRKFTKTKIVIGQDPTE---NGDRIFTVWGNDQK 312
Query: 765 AIALAQYLI--NMSVELLR 781
++ LAQ ++ N+ VE R
Sbjct: 313 SVKLAQTMLLKNLEVEKKR 331
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 135/310 (43%), Gaps = 35/310 (11%)
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
N L+G +IGK G + +I +G I IS + + +RTIT+ GT +A A A+ I
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACASAEIEI- 341
Query: 330 MSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGA 389
++ LR E+ +D + N + P L+A + L +L+ P
Sbjct: 342 --MKKLR---------EAFENDMLAVNQQANLIPGLNLSALGIFSTGL----SVLSPPAG 386
Query: 390 LNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGK 449
+ + G SS FG P +Y + + + +
Sbjct: 387 PRGAPPAAPYHPFTTHSGYFSSLYPHHQ---FGPFPHHHSYPEQEIVNL------FIPTQ 437
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIE 506
VG+IIGK G +K+L +G+ I I+ + P ER+V + G ++ F+A I
Sbjct: 438 AVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI----- 492
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
F K + ++ E ++ + VP+S G +IGKGG + ++ + A V V D P
Sbjct: 493 -FGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTP 551
Query: 567 NSTEREVNIK 576
+ E EV ++
Sbjct: 552 DENE-EVIVR 560
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 140/342 (40%), Gaps = 61/342 (17%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T+K + +++ S++ I +S E+ VT+ + + A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEAC 255
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I + ++ K ++ I L+++ G +IGK G +K I +G +
Sbjct: 256 RMILEIMQ-------KEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKI 308
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPG 616
++S D+ + ER + +KG +A A +I + ++
Sbjct: 309 TISSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREA-------------------- 348
Query: 617 LIGNQFGMQNSLMGAPDMGN-NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTN 675
+N ++ N P L+ALG+ + A T
Sbjct: 349 -------FENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTT 401
Query: 676 H-------MPRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTK 728
H P +Q GP + Q + +P + +GA+IGK G
Sbjct: 402 HSGYFSSLYPHHQF------------GPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 449
Query: 729 IFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 770
I ++ + +GA I+I+ + E D ++R + +TG P+A AQ
Sbjct: 450 IKQLARFAGASIKIAPA--EGPDVSERMVIITGPPEAQFKAQ 489
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 135/333 (40%), Gaps = 61/333 (18%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T+K + +++ S++ I +S E+ VT+ + + A +I + ++
Sbjct: 205 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEACRMILEIMQ- 263
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
K ++ I L+++ G +IGK G +K I +G + ++S D+
Sbjct: 264 ------KEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS 317
Query: 121 PNSTEREVNIKGVPDAVTQAIYQICLIMVDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
+ ER + +KG +A A +I + ++ +
Sbjct: 318 IYNPERTITVKGTVEACASAEIEIMKKLREA---------------------------FE 350
Query: 181 NSLMGAPDMGN-NPLAGLAALGLGGNSGGGMGGGLNAAALAALASSQLKTNH-------M 232
N ++ N P L+ALG+ + A T H
Sbjct: 351 NDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLY 410
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P +Q GP + Q + +P + +GA+IGK G I ++ + +G
Sbjct: 411 PHHQF------------GPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAG 458
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQ 325
A I+I+ + E D ++R + +TG P+A AQ
Sbjct: 459 ASIKIAPA--EGPDVSERMVIITGPPEAQFKAQ 489
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G +K+L +G+ I I+ + P ER+V + G ++ F+A I
Sbjct: 439 VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI------ 492
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
F K + ++ E ++ + VP+S G +IGKGG + ++ + A V V D P+
Sbjct: 493 FGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 552
Query: 123 STEREVNIK 131
E EV ++
Sbjct: 553 ENE-EVIVR 560
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 72 GGNGESQLIQ--LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 129
GG +++ I LR++VP G+IIGK G IK I + + + V + + E+ V
Sbjct: 184 GGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVT 243
Query: 130 IKGVPDAVTQAIYQICLIM---VDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 180
I P+ ++A I IM D IP + L N GL+G G +
Sbjct: 244 IHATPEGTSEACRMILEIMQKEADETKLAEEIPLKILAHN----GLVGRLIGKE 293
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 517 GGNGESQLIQ--LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVN 574
GG +++ I LR++VP G+IIGK G IK I + + + V + + E+ V
Sbjct: 184 GGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVT 243
Query: 575 IKGVPDAVTQAIYQICLIM---VDSPPKGATIPYRPLPQNAGGPGLIGNQFGMQ 625
I P+ ++A I IM D IP + L N GL+G G +
Sbjct: 244 IHATPEGTSEACRMILEIMQKEADETKLAEEIPLKILAHN----GLVGRLIGKE 293
Score = 33.5 bits (75), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 233 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 292
P + Q + +R P + +Q + VP + +GA+IGK G I I K +
Sbjct: 165 PPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQ 224
Query: 293 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 328
+ + I + +E + ++ +T+ TP+ + A +I
Sbjct: 225 SRVDIHR--KENSGAAEKPVTIHATPEGTSEACRMI 258
Score = 33.5 bits (75), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 678 PRNQNQNQNQHNRNNRDGPSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISG 737
P + Q + +R P + +Q + VP + +GA+IGK G I I K +
Sbjct: 165 PPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQ 224
Query: 738 AMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLI 773
+ + I + +E + ++ +T+ TP+ + A +I
Sbjct: 225 SRVDIHR--KENSGAAEKPVTIHATPEGTSEACRMI 258
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 122/307 (39%), Gaps = 58/307 (18%)
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
N +G +IGK G + +I + + I IS E + +RTIT+ G + A A+ I
Sbjct: 285 NNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIM 344
Query: 330 MSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGA 389
+ ES +D +S N P GLN
Sbjct: 345 KKIR------------ESYENDIASMNLQAHLIP--GLN--------------------- 369
Query: 390 LNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGK 449
LNAL G+ G S P P + +T V +
Sbjct: 370 LNALGLFPPTSGMPPPTSGPPSAM----------TPPYPQFEQSETETVHL----FIPAL 415
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIE 506
VG+IIGK G+ +K+L +G+ I I+ + P+ R+V + G ++ F+A I I+
Sbjct: 416 SVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E ++ E ++ + VP+ G +IGKGG + ++ S A V V D P
Sbjct: 476 E------ENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTP 529
Query: 567 NSTEREV 573
+ ++ V
Sbjct: 530 DENDQVV 536
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 44/179 (24%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSST-----PERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ +++ +KI IS PER +TV G++++ +A I K I
Sbjct: 288 VGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKI 347
Query: 61 EEFHKNQ------NKHL--GGN-------------------------------GESQLIQ 81
E ++N HL G N +S+
Sbjct: 348 RESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPYPQFEQSETET 407
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
+ L +PA G+IIGK G IK + +GAS+ +A P++ R V I G P+A +A
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKA 466
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 44/179 (24%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSST-----PERIVTVIGSMDSLFRAFSLITKNI 505
VG +IGK G +KK+ +++ +KI IS PER +TV G++++ +A I K I
Sbjct: 288 VGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKI 347
Query: 506 EEFHKNQ------NKHL--GGN-------------------------------GESQLIQ 526
E ++N HL G N +S+
Sbjct: 348 RESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPYPQFEQSETET 407
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+ L +PA G+IIGK G IK + +GAS+ +A P++ R V I G P+A +A
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKA 466
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L +G+ I I+ + P+ R+V + G ++ F+A I I+E
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKE 476
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ E ++ + VP+ G +IGKGG + ++ S A V V D P+
Sbjct: 477 ------ENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPD 530
Query: 123 STEREV 128
++ V
Sbjct: 531 ENDQVV 536
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T++ + +++ SKI + ++ E+ +T++ + +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT---- 253
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
S K+I E + + + E I L+++ + G +IGK G +K I + + +
Sbjct: 254 SAACKSILEIMHKEAQDIKFTEE---IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKI 310
Query: 559 YVA--SDMLPNSTEREVNIKG 577
++ ++ + ER + +KG
Sbjct: 311 TISPLQELTLYNPERTITVKG 331
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
+Q T + +P +GA+IGK G I ++ + +GA I+I+ + E D+ R + +TG
Sbjct: 401 EQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPA--EAPDAKVRMVIITG 458
Query: 317 TPDAIALAQ 325
P+A AQ
Sbjct: 459 PPEAQFKAQ 467
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
+Q T + +P +GA+IGK G I ++ + +GA I+I+ + E D+ R + +TG
Sbjct: 401 EQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPA--EAPDAKVRMVIITG 458
Query: 762 TPDAIALAQ 770
P+A AQ
Sbjct: 459 PPEAQFKAQ 467
Score = 38.5 bits (88), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 67/132 (50%), Gaps = 12/132 (9%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T++ + +++ SKI + ++ E+ +T++ + + S K+I E
Sbjct: 207 VGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT----SAACKSILE 262
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDML 120
+ + + E I L+++ + G +IGK G +K I + + + ++ ++
Sbjct: 263 IMHKEAQDIKFTEE---IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELT 319
Query: 121 PNSTEREVNIKG 132
+ ER + +KG
Sbjct: 320 LYNPERTITVKG 331
Score = 36.6 bits (83), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
LRL+VP G+IIGK G+ I+ I + + + + V + E+ + I P+ + A
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSAAC 257
Query: 142 YQICLIM 148
I IM
Sbjct: 258 KSILEIM 264
Score = 36.6 bits (83), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 586
LRL+VP G+IIGK G+ I+ I + + + + V + E+ + I P+ + A
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSAAC 257
Query: 587 YQICLIM 593
I IM
Sbjct: 258 KSILEIM 264
Score = 33.1 bits (74), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 696 PSQKTNQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDR 755
P + Q+ + + VP + +GA+IGK G I I K + + I + + +E + ++
Sbjct: 185 PGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR--KENAGAAEK 242
Query: 756 TITMTGTPDAIALA 769
+IT+ TP+ + A
Sbjct: 243 SITILSTPEGTSAA 256
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 44/179 (24%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ +++ +KI IS PER +TV G++++ RA I K +
Sbjct: 288 VGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKV 347
Query: 61 EEFHKNQ------NKHL---------------------------GGNGESQLIQ------ 81
E ++N HL G S +Q
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEM 407
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
+++ +PA G+IIGK G IK + + AS+ +A P+S R V I G P+A +A
Sbjct: 408 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKA 466
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 44/179 (24%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSST-----PERIVTVIGSMDSLFRAFSLITKNI 505
VG +IGK G +KK+ +++ +KI IS PER +TV G++++ RA I K +
Sbjct: 288 VGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKV 347
Query: 506 EEFHKNQ------NKHL---------------------------GGNGESQLIQ------ 526
E ++N HL G S +Q
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEM 407
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+++ +PA G+IIGK G IK + + AS+ +A P+S R V I G P+A +A
Sbjct: 408 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKA 466
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVT 486
Y++ Q ++ + + VG+IIGK G+ +K+L + + I I+ TP+ R+V
Sbjct: 396 YSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV 455
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
+ G ++ F+A I ++E ++ G E ++ + VPAS G +IGKGG
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKE------ENFFGPKEEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 547 IKTIRETSGASVYVASDMLPNSTER 571
+ ++ + A V V D P+ ++
Sbjct: 510 VNELQNLTAAEVVVPRDQTPDENDQ 534
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L + + I I+ TP+ R+V + G ++ F+A I ++E
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKE 476
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ G E ++ + VPAS G +IGKGG + ++ + A V V D P+
Sbjct: 477 ------ENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPD 530
Query: 123 STER 126
++
Sbjct: 531 ENDQ 534
Score = 41.2 bits (95), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T++ + +++ SKI + ++ E+ ++V + + A
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSAC 257
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I +E HK + + L+++ + G +IGK G +K + + + +
Sbjct: 258 KMI---LEIMHKEAK----DTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKI 310
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQI 589
++S D+ + ER + +KG + +A +I
Sbjct: 311 TISSLQDLTLYNPERTITVKGAIENCCRAEQEI 343
Score = 40.0 bits (92), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T++ + +++ SKI + ++ E+ ++V + + A +I +E
Sbjct: 207 VGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACKMI---LEI 263
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
HK + + L+++ + G +IGK G +K + + + + ++S D+
Sbjct: 264 MHKEAK----DTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLT 319
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
+ ER + +KG + +A +I
Sbjct: 320 LYNPERTITVKGAIENCCRAEQEI 343
Score = 40.0 bits (92), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I LRL+VP G+IIGK G+ I+ I + + + + V + E+ +++ P+ +
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSS 255
Query: 140 AIYQICLIMVDSPPKGAT---IPYRPLPQNAGGPGLIGNQ 176
A I IM T +P + L N LIG +
Sbjct: 256 ACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 295
Score = 40.0 bits (92), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I LRL+VP G+IIGK G+ I+ I + + + + V + E+ +++ P+ +
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSS 255
Query: 585 AIYQICLIMVDSPPKGAT---IPYRPLPQNAGGPGLIGNQ 621
A I IM T +P + L N LIG +
Sbjct: 256 ACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 295
Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P + +GA+IGK G I ++ + + A I+I+ E DS R + +TG P+A A
Sbjct: 409 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPP--ETPDSKVRMVVITGPPEAQFKA 466
Query: 325 Q 325
Q
Sbjct: 467 Q 467
Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P + +GA+IGK G I ++ + + A I+I+ E DS R + +TG P+A A
Sbjct: 409 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPP--ETPDSKVRMVVITGPPEAQFKA 466
Query: 770 Q 770
Q
Sbjct: 467 Q 467
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 44/179 (24%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ +++ +KI IS PER +TV G++++ RA I K +
Sbjct: 288 VGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKV 347
Query: 61 EEFHKNQ------NKHL---------------------------GGNGESQLIQ------ 81
E ++N HL G S +Q
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEM 407
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
+++ +PA G+IIGK G IK + + AS+ +A P+S R V I G P+A +A
Sbjct: 408 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKA 466
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 44/179 (24%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSS-----TPERIVTVIGSMDSLFRAFSLITKNI 505
VG +IGK G +KK+ +++ +KI IS PER +TV G++++ RA I K +
Sbjct: 288 VGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKV 347
Query: 506 EEFHKNQ------NKHL---------------------------GGNGESQLIQ------ 526
E ++N HL G S +Q
Sbjct: 348 REAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEM 407
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+++ +PA G+IIGK G IK + + AS+ +A P+S R V I G P+A +A
Sbjct: 408 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKA 466
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 430 YANIQTTGVQRRMRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVT 486
Y++ Q ++ + + VG+IIGK G+ +K+L + + I I+ TP+ R+V
Sbjct: 396 YSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI 455
Query: 487 VIGSMDSLFRAFSLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQ 546
+ G ++ F+A I ++E ++ G E ++ + VPAS G +IGKGG
Sbjct: 456 ITGPPEAQFKAQGRIYGKLKE------ENFFGPKEEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 547 IKTIRETSGASVYVASDMLPNSTER 571
+ ++ + A V V D P+ ++
Sbjct: 510 VNELQNLTAAEVVVPRDQTPDENDQ 534
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L + + I I+ TP+ R+V + G ++ F+A I ++E
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKE 476
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ G E ++ + VPAS G +IGKGG + ++ + A V V D P+
Sbjct: 477 ------ENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPD 530
Query: 123 STER 126
++
Sbjct: 531 ENDQ 534
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T++ + +++ SKI + ++ E+ ++V + + A
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSAC 257
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
+I +E HK + + L+++ + G +IGK G +K + + + +
Sbjct: 258 KMI---LEIMHKEAK----DTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKI 310
Query: 559 YVAS--DMLPNSTEREVNIKGVPDAVTQAIYQI 589
++S D+ + ER + +KG + +A +I
Sbjct: 311 TISSLQDLTLYNPERTITVKGAIENCCRAEQEI 343
Score = 40.0 bits (92), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 80 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 139
I LRL+VP G+IIGK G+ I+ I + + + + V + E+ +++ P+ +
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSS 255
Query: 140 AIYQICLIMVDSPPKGAT---IPYRPLPQNAGGPGLIGNQ 176
A I IM T +P + L N LIG +
Sbjct: 256 ACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 295
Score = 40.0 bits (92), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 525 IQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQ 584
I LRL+VP G+IIGK G+ I+ I + + + + V + E+ +++ P+ +
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSS 255
Query: 585 AIYQICLIMVDSPPKGAT---IPYRPLPQNAGGPGLIGNQ 621
A I IM T +P + L N LIG +
Sbjct: 256 ACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKE 295
Score = 40.0 bits (92), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T++ + +++ SKI + ++ E+ ++V + + A +I +E
Sbjct: 207 VGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACKMI---LEI 263
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVAS--DML 120
HK + + L+++ + G +IGK G +K + + + + ++S D+
Sbjct: 264 MHKEAK----DTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLT 319
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
+ ER + +KG + +A +I
Sbjct: 320 LYNPERTITVKGAIENCCRAEQEI 343
Score = 38.9 bits (89), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 265 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 324
++ +P + +GA+IGK G I ++ + + A I+I+ E DS R + +TG P+A A
Sbjct: 409 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPP--ETPDSKVRMVIITGPPEAQFKA 466
Query: 325 Q 325
Q
Sbjct: 467 Q 467
Score = 38.9 bits (89), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 710 EMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALA 769
++ +P + +GA+IGK G I ++ + + A I+I+ E DS R + +TG P+A A
Sbjct: 409 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPP--ETPDSKVRMVIITGPPEAQFKA 466
Query: 770 Q 770
Q
Sbjct: 467 Q 467
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 256 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 315
QQQ I + VP + +GA+IGK G I I K + + I + + +E + ++ I++
Sbjct: 190 KQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHR--KENAGAAEKAISVH 247
Query: 316 GTPDAIALAQYLI 328
TP+ + A +I
Sbjct: 248 STPEGCSSACKMI 260
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 701 NQQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMT 760
QQQ I + VP + +GA+IGK G I I K + + I + + +E + ++ I++
Sbjct: 190 KQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHR--KENAGAAEKAISVH 247
Query: 761 GTPDAIALAQYLI 773
TP+ + A +I
Sbjct: 248 STPEGCSSACKMI 260
>sp|P38199|HEK2_YEAST Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HEK2 PE=1
SV=1
Length = 381
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 45/242 (18%)
Query: 408 GGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRH--IMQGKEVGSIIGKSGETVKKL 465
GGSS GS +GG A + T Q + H ++ KE IIG G T+ ++
Sbjct: 20 GGSSDAGSAATGG----------APVVGTTAQPTINHRLLLSLKEAAKIIGTKGSTISRI 69
Query: 466 REESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE---------------- 507
R + KI IS+ +RI++ G++ ++ A I + +
Sbjct: 70 RAANAVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEH 129
Query: 508 --FHKNQNKHLGGNGESQLIQL---------RLIVPASQCGSIIGKGGSQIKTIRETSGA 556
FH N L + ++ L RLIV S SIIGK G+ IK++ G
Sbjct: 130 YYFH-FLNHILPAPSKDEIRDLQQLEDIGYVRLIVANSHISSIIGKAGATIKSLINKHGV 188
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGAT-IPYRP-LPQNAG 613
+ + D LP S ER + I+G P ++T + +I +I+ D + +T Y P L +++G
Sbjct: 189 KIVASKDFLPASDERIIEIQGFPGSITNVLIEISEIILSDVDVRFSTERSYFPHLKKSSG 248
Query: 614 GP 615
P
Sbjct: 249 EP 250
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 33/199 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
KE IIG G T+ ++R + KI IS+ +RI++ G++ ++ A I +
Sbjct: 53 KEAAKIIGTKGSTISRIRAANAVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVDVLN 112
Query: 62 E------------------FHKNQNKHLGGNGESQLIQL---------RLIVPASQCGSI 94
+ FH N L + ++ L RLIV S SI
Sbjct: 113 KRNPENEDAAEGEAEEHYYFH-FLNHILPAPSKDEIRDLQQLEDIGYVRLIVANSHISSI 171
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPP 153
IGK G+ IK++ G + + D LP S ER + I+G P ++T + +I +I+ D
Sbjct: 172 IGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEIILSDVDV 231
Query: 154 KGAT-IPYRP-LPQNAGGP 170
+ +T Y P L +++G P
Sbjct: 232 RFSTERSYFPHLKKSSGEP 250
Score = 40.4 bits (93), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGS----MDSL 494
+R I+ + SIIGK+G T+K L + G KI S P ERI+ + G + L
Sbjct: 159 VRLIVANSHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVL 218
Query: 495 FRAFSLITKNIEEFHKNQNKHL----GGNGE------SQLIQLRLIVPASQCGSIIGKGG 544
+I +++ + + +GE S ++ L +P G+IIG+G
Sbjct: 219 IEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAIIGRGM 278
Query: 545 SQIKTIRETSGASVYV 560
++IK ++ + ++ V
Sbjct: 279 NRIKNLKTFTKTNIVV 294
Score = 37.4 bits (85), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGS----MDSLFRAFSLIT 57
+ SIIGK+G T+K L + G KI S P ERI+ + G + L +I
Sbjct: 167 HISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEIIL 226
Query: 58 KNIEEFHKNQNKHL----GGNGE------SQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+++ + + +GE S ++ L +P G+IIG+G ++IK ++
Sbjct: 227 SDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAIIGRGMNRIKNLKT 286
Query: 108 TSGASVYV 115
+ ++ V
Sbjct: 287 FTKTNIVV 294
>sp|A6ZKR5|HEK2_YEAS7 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain YJM789) GN=HEK2 PE=3 SV=1
Length = 381
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 45/242 (18%)
Query: 408 GGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRH--IMQGKEVGSIIGKSGETVKKL 465
GGSS GS +GG A + T Q + H ++ KE IIG G T+ ++
Sbjct: 20 GGSSDAGSAATGG----------APVVGTTAQPTINHRLLLSLKEAAKIIGTKGSTISRI 69
Query: 466 REESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIEE---------------- 507
R + KI IS+ +RI++ G++ ++ A I + +
Sbjct: 70 RAANAVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEH 129
Query: 508 --FHKNQNKHLGGNGESQLIQL---------RLIVPASQCGSIIGKGGSQIKTIRETSGA 556
FH N L + ++ L RLIV S SIIGK G+ IK++ G
Sbjct: 130 YYFH-FLNHILPAPSKDEIRDLQQLEDIGYVRLIVANSHISSIIGKAGATIKSLINKHGV 188
Query: 557 SVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPPKGAT-IPYRP-LPQNAG 613
+ + D LP S ER + I+G P ++T + +I +I+ D + +T Y P L +++G
Sbjct: 189 KIVASKDFLPASDERIIEIQGFPGSITNVLIEISEIILSDVDVRFSTERSYFPHLKKSSG 248
Query: 614 GP 615
P
Sbjct: 249 EP 250
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 33/199 (16%)
Query: 4 KEVGSIIGKSGETVKKLREESGSKIYISDSS--TPERIVTVIGSMDSLFRAFSLITKNIE 61
KE IIG G T+ ++R + KI IS+ +RI++ G++ ++ A I +
Sbjct: 53 KEAAKIIGTKGSTISRIRAANAVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVDVLN 112
Query: 62 E------------------FHKNQNKHLGGNGESQLIQL---------RLIVPASQCGSI 94
+ FH N L + ++ L RLIV S SI
Sbjct: 113 KRNPENEDAAEGEAEEHYYFH-FLNHILPAPSKDEIRDLQQLEDIGYVRLIVANSHISSI 171
Query: 95 IGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAIYQIC-LIMVDSPP 153
IGK G+ IK++ G + + D LP S ER + I+G P ++T + +I +I+ D
Sbjct: 172 IGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEIILSDVDV 231
Query: 154 KGAT-IPYRP-LPQNAGGP 170
+ +T Y P L +++G P
Sbjct: 232 RFSTERSYFPHLKKSSGEP 250
Score = 40.4 bits (93), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGS----MDSL 494
+R I+ + SIIGK+G T+K L + G KI S P ERI+ + G + L
Sbjct: 159 VRLIVANSHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVL 218
Query: 495 FRAFSLITKNIEEFHKNQNKHL----GGNGE------SQLIQLRLIVPASQCGSIIGKGG 544
+I +++ + + +GE S ++ L +P G+IIG+G
Sbjct: 219 IEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAIIGRGM 278
Query: 545 SQIKTIRETSGASVYV 560
++IK ++ + ++ V
Sbjct: 279 NRIKNLKTFTKTNIVV 294
Score = 37.4 bits (85), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 5 EVGSIIGKSGETVKKLREESGSKIYISDSSTP---ERIVTVIGS----MDSLFRAFSLIT 57
+ SIIGK+G T+K L + G KI S P ERI+ + G + L +I
Sbjct: 167 HISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEIIL 226
Query: 58 KNIEEFHKNQNKHL----GGNGE------SQLIQLRLIVPASQCGSIIGKGGSQIKTIRE 107
+++ + + +GE S ++ L +P G+IIG+G ++IK ++
Sbjct: 227 SDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAIIGRGMNRIKNLKT 286
Query: 108 TSGASVYV 115
+ ++ V
Sbjct: 287 FTKTNIVV 294
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 44/179 (24%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSST-----PERIVTVIGSMDSLFRAFSLITKNI 60
VG +IGK G +KK+ +++ +KI IS PER +TV GS+++ +A I K I
Sbjct: 288 VGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKI 347
Query: 61 EEFHKNQ------NKHL--GGN-------------------------------GESQLIQ 81
E ++N HL G N +S+
Sbjct: 348 RESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQSETET 407
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 140
+ L +PA G+IIGK G IK + +GAS+ +A P++ R V I G P+A +A
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKA 466
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 44/179 (24%)
Query: 451 VGSIIGKSGETVKKLREESGSKIYISDSST-----PERIVTVIGSMDSLFRAFSLITKNI 505
VG +IGK G +KK+ +++ +KI IS PER +TV GS+++ +A I K I
Sbjct: 288 VGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKI 347
Query: 506 EEFHKNQ------NKHL--GGN-------------------------------GESQLIQ 526
E ++N HL G N +S+
Sbjct: 348 RESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQSETET 407
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQA 585
+ L +PA G+IIGK G IK + +GAS+ +A P++ R V I G P+A +A
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKA 466
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 58/307 (18%)
Query: 270 NELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPDAIALAQYLIN 329
N +G +IGK G + +I + + I IS E + +RTIT+ G+ + A A+ I
Sbjct: 285 NNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIM 344
Query: 330 MSVELLRANLNGEGGGESNMDDFSSDNNLPSSAPLAGLNASNPLAAALPQLAQILTKPGA 389
+ ES +D +S N P GLN
Sbjct: 345 KKIR------------ESYENDIASMNLQAHLIP--GLN--------------------- 369
Query: 390 LNALTSLSALGGLSDLLGGGSSGGGSGNSGGFGGVPQGPNYANIQTTGVQRRMRHIMQGK 449
L+ALG L S + P P + +T V +
Sbjct: 370 ------LNALG----LFPPTSGMPPPTSGPPSTLTPPYPQFEQSETETVHL----FIPAL 415
Query: 450 EVGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIE 506
VG+IIGK G+ +K+L +G+ I I+ + P+ R+V + G ++ F+A I I+
Sbjct: 416 SVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIK 475
Query: 507 EFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLP 566
E ++ E ++ + VP+ G +IGKGG + ++ S A V V D P
Sbjct: 476 E------ENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQTP 529
Query: 567 NSTEREV 573
+ ++ V
Sbjct: 530 DENDQVV 536
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYISDSSTPE---RIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G+ +K+L +G+ I I+ + P+ R+V + G ++ F+A I I+E
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKE 476
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPN 122
++ E ++ + VP+ G +IGKGG + ++ S A V V D P+
Sbjct: 477 ------ENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQTPD 530
Query: 123 STEREV 128
++ V
Sbjct: 531 ENDQVV 536
Score = 40.0 bits (92), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 442 MRHIMQGKEVGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAF 498
+R ++ + VG+IIGK G T++ + +++ SKI + ++ E+ +T++ + +
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGT---- 253
Query: 499 SLITKNIEEFHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASV 558
S K+I E + + + E I L+++ + G +IGK G +K I + + +
Sbjct: 254 SAACKSILEIMHKEAQDIKFTEE---IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKI 310
Query: 559 YVA--SDMLPNSTEREVNIKGVPDAVTQAIYQI 589
++ ++ + ER + +KG + +A +I
Sbjct: 311 TISPLQELTLYNPERTITVKGSVETCAKAEEEI 343
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 257 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 316
+Q T + +P +GA+IGK G I ++ + +GA I+I+ + E D+ R + +TG
Sbjct: 401 EQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPA--EAPDAKVRMVIITG 458
Query: 317 TPDAIALAQ 325
P+A AQ
Sbjct: 459 PPEAQFKAQ 467
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 702 QQQNQITKEMTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTG 761
+Q T + +P +GA+IGK G I ++ + +GA I+I+ + E D+ R + +TG
Sbjct: 401 EQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPA--EAPDAKVRMVIITG 458
Query: 762 TPDAIALAQ 770
P+A AQ
Sbjct: 459 PPEAQFKAQ 467
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 72/144 (50%), Gaps = 12/144 (8%)
Query: 6 VGSIIGKSGETVKKLREESGSKIYI---SDSSTPERIVTVIGSMDSLFRAFSLITKNIEE 62
VG+IIGK G T++ + +++ SKI + ++ E+ +T++ + + S K+I E
Sbjct: 207 VGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGT----SAACKSILE 262
Query: 63 FHKNQNKHLGGNGESQLIQLRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVA--SDML 120
+ + + E I L+++ + G +IGK G +K I + + + ++ ++
Sbjct: 263 IMHKEAQDIKFTEE---IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELT 319
Query: 121 PNSTEREVNIKGVPDAVTQAIYQI 144
+ ER + +KG + +A +I
Sbjct: 320 LYNPERTITVKGSVETCAKAEEEI 343
Score = 36.6 bits (83), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 82 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 141
LRL+VP G+IIGK G+ I+ I + + + + V + E+ + I P+ + A
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGTSAAC 257
Query: 142 YQICLIM 148
I IM
Sbjct: 258 KSILEIM 264
Score = 36.6 bits (83), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 527 LRLIVPASQCGSIIGKGGSQIKTIRETSGASVYVASDMLPNSTEREVNIKGVPDAVTQAI 586
LRL+VP G+IIGK G+ I+ I + + + + V + E+ + I P+ + A
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGTSAAC 257
Query: 587 YQICLIM 593
I IM
Sbjct: 258 KSILEIM 264
Score = 33.1 bits (74), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 711 MTVPNELIGAVIGKGGTKIFEIRKISGAMIRISKSSEEEEDSNDRTITMTGTPD 764
+ VP + +GA+IGK G I I K + + I + + +E + +++IT+ TP+
Sbjct: 200 LLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHR--KENTGAAEKSITILSTPE 251
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.130 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 364,309,908
Number of Sequences: 539616
Number of extensions: 17717454
Number of successful extensions: 193118
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 378
Number of HSP's that attempted gapping in prelim test: 162063
Number of HSP's gapped (non-prelim): 26514
length of query: 914
length of database: 191,569,459
effective HSP length: 127
effective length of query: 787
effective length of database: 123,038,227
effective search space: 96831084649
effective search space used: 96831084649
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)