Query psy13907
Match_columns 698
No_of_seqs 431 out of 2734
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 23:32:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13907.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13907hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q7z_A 5-methyltetrahydrofolat 100.0 1.8E-69 6.1E-74 617.1 31.2 348 267-667 6-360 (566)
2 1lt8_A Betaine-homocysteine me 100.0 9.3E-67 3.2E-71 570.7 21.4 306 267-615 12-339 (406)
3 1q7z_A 5-methyltetrahydrofolat 100.0 1.3E-36 4.5E-41 346.5 26.6 256 1-335 68-360 (566)
4 1lt8_A Betaine-homocysteine me 100.0 3.3E-33 1.1E-37 305.7 16.7 223 1-291 78-307 (406)
5 2r51_A Vacuolar protein sortin 99.4 2.5E-14 8.4E-19 152.7 0.2 96 602-697 176-273 (340)
6 2fau_A Vacuolar protein sortin 99.4 7.2E-14 2.5E-18 149.1 0.1 96 602-697 176-273 (341)
7 3cpr_A Dihydrodipicolinate syn 94.2 0.77 2.6E-05 48.0 15.2 183 73-325 33-235 (304)
8 1xky_A Dihydrodipicolinate syn 93.9 0.76 2.6E-05 48.0 14.3 184 73-325 29-233 (301)
9 2vc6_A MOSA, dihydrodipicolina 93.6 0.65 2.2E-05 48.2 13.1 111 73-232 17-135 (292)
10 1w3i_A EDA, 2-keto-3-deoxy glu 93.5 1.4 4.9E-05 45.6 15.6 182 73-325 16-214 (293)
11 2ehh_A DHDPS, dihydrodipicolin 93.5 1.3 4.3E-05 46.0 15.1 183 73-325 17-222 (294)
12 2yxg_A DHDPS, dihydrodipicolin 93.5 1.1 3.7E-05 46.4 14.6 111 73-232 17-135 (289)
13 2v9d_A YAGE; dihydrodipicolini 93.5 0.74 2.5E-05 49.0 13.5 185 73-325 48-256 (343)
14 3flu_A DHDPS, dihydrodipicolin 93.2 1.6 5.3E-05 45.4 15.3 183 73-325 24-228 (297)
15 2r91_A 2-keto-3-deoxy-(6-phosp 93.2 1.3 4.4E-05 45.8 14.5 182 73-325 15-213 (286)
16 3qze_A DHDPS, dihydrodipicolin 92.9 1.3 4.4E-05 46.5 14.2 110 73-231 40-157 (314)
17 3l21_A DHDPS, dihydrodipicolin 92.8 0.78 2.7E-05 47.9 12.3 183 73-325 32-234 (304)
18 3m5v_A DHDPS, dihydrodipicolin 92.7 1.2 4.2E-05 46.3 13.6 110 73-231 24-142 (301)
19 2rfg_A Dihydrodipicolinate syn 92.5 1.2 4.1E-05 46.3 13.2 111 73-232 17-135 (297)
20 3daq_A DHDPS, dihydrodipicolin 92.4 1.3 4.5E-05 45.9 13.4 179 81-325 23-224 (292)
21 3tak_A DHDPS, dihydrodipicolin 92.3 1.1 3.8E-05 46.4 12.6 185 73-325 18-222 (291)
22 3a5f_A Dihydrodipicolinate syn 92.1 1.1 3.6E-05 46.6 12.2 181 81-325 22-222 (291)
23 3qfe_A Putative dihydrodipicol 92.0 2.6 8.9E-05 44.2 15.2 114 73-233 28-149 (318)
24 3si9_A DHDPS, dihydrodipicolin 91.7 2.8 9.6E-05 43.9 14.9 185 73-325 39-244 (315)
25 3d0c_A Dihydrodipicolinate syn 91.6 2.6 9E-05 44.1 14.7 182 73-325 29-231 (314)
26 3eb2_A Putative dihydrodipicol 91.2 1.4 4.8E-05 45.9 11.9 185 73-325 21-225 (300)
27 2ojp_A DHDPS, dihydrodipicolin 90.7 2.7 9.3E-05 43.4 13.6 111 73-232 18-136 (292)
28 2r8w_A AGR_C_1641P; APC7498, d 88.3 3.6 0.00012 43.4 12.4 111 73-232 51-169 (332)
29 2wkj_A N-acetylneuraminate lya 88.3 2.8 9.7E-05 43.6 11.5 183 73-325 28-232 (303)
30 3na8_A Putative dihydrodipicol 88.1 3.1 0.00011 43.6 11.7 111 73-232 41-159 (315)
31 1o5k_A DHDPS, dihydrodipicolin 88.0 3.4 0.00012 43.1 11.9 111 73-232 29-147 (306)
32 3fkr_A L-2-keto-3-deoxyarabona 87.3 4.2 0.00014 42.4 12.1 113 73-231 25-145 (309)
33 1f6k_A N-acetylneuraminate lya 87.0 3.9 0.00013 42.2 11.6 183 73-325 20-224 (293)
34 3noy_A 4-hydroxy-3-methylbut-2 86.6 5.4 0.00018 42.4 12.2 48 82-131 47-94 (366)
35 3s5o_A 4-hydroxy-2-oxoglutarat 85.4 6.3 0.00021 41.0 12.2 113 73-232 31-151 (307)
36 2nuw_A 2-keto-3-deoxygluconate 85.0 10 0.00034 39.0 13.4 183 73-325 16-212 (288)
37 3lg3_A Isocitrate lyase; conse 84.9 11 0.00037 41.2 13.9 134 422-563 170-350 (435)
38 3i4e_A Isocitrate lyase; struc 84.7 12 0.0004 40.9 14.2 135 422-563 170-350 (439)
39 3e96_A Dihydrodipicolinate syn 84.7 3.9 0.00013 42.8 10.3 109 73-231 29-145 (316)
40 3eol_A Isocitrate lyase; seatt 83.9 12 0.0004 40.9 13.7 134 422-563 163-345 (433)
41 3b4u_A Dihydrodipicolinate syn 83.2 10 0.00034 39.2 12.5 112 73-231 20-141 (294)
42 3dz1_A Dihydrodipicolinate syn 83.0 7.3 0.00025 40.6 11.5 184 73-325 25-234 (313)
43 2ojp_A DHDPS, dihydrodipicolin 82.6 14 0.00046 38.1 13.3 142 411-579 18-176 (292)
44 3cpr_A Dihydrodipicolinate syn 82.3 13 0.00046 38.4 13.1 142 411-579 33-191 (304)
45 2hmc_A AGR_L_411P, dihydrodipi 81.3 9 0.00031 40.6 11.5 109 73-231 43-159 (344)
46 3fkr_A L-2-keto-3-deoxyarabona 81.2 35 0.0012 35.3 15.9 142 411-579 25-187 (309)
47 1xky_A Dihydrodipicolinate syn 81.1 14 0.00047 38.3 12.7 143 411-580 29-188 (301)
48 3h5d_A DHDPS, dihydrodipicolin 80.9 10 0.00035 39.5 11.7 105 82-231 29-142 (311)
49 3l21_A DHDPS, dihydrodipicolin 80.3 11 0.00039 39.0 11.7 140 411-577 32-188 (304)
50 2ehh_A DHDPS, dihydrodipicolin 80.3 16 0.00055 37.6 12.8 144 411-580 17-177 (294)
51 2vc6_A MOSA, dihydrodipicolina 80.1 12 0.0004 38.6 11.7 144 411-580 17-177 (292)
52 3tak_A DHDPS, dihydrodipicolin 80.0 8.2 0.00028 39.7 10.5 104 411-527 18-136 (291)
53 3flu_A DHDPS, dihydrodipicolin 79.8 14 0.00048 38.1 12.2 143 411-580 24-183 (297)
54 1z41_A YQJM, probable NADH-dep 79.7 47 0.0016 34.7 16.5 137 413-563 37-247 (338)
55 2yxg_A DHDPS, dihydrodipicolin 79.6 14 0.00049 37.9 12.1 143 411-579 17-176 (289)
56 1vzw_A Phosphoribosyl isomeras 79.1 9.3 0.00032 37.8 10.2 139 422-580 35-189 (244)
57 3m5v_A DHDPS, dihydrodipicolin 78.8 13 0.00043 38.6 11.4 144 411-580 24-185 (301)
58 1o5k_A DHDPS, dihydrodipicolin 78.7 15 0.00052 38.0 12.1 144 411-580 29-189 (306)
59 3a5f_A Dihydrodipicolinate syn 78.7 14 0.00047 38.0 11.7 142 412-580 19-177 (291)
60 3na8_A Putative dihydrodipicol 78.6 14 0.00049 38.4 11.9 144 411-580 41-201 (315)
61 1aj0_A DHPS, dihydropteroate s 78.6 24 0.00081 36.3 13.3 161 46-286 14-190 (282)
62 2r8w_A AGR_C_1641P; APC7498, d 78.0 17 0.00057 38.3 12.2 142 411-578 51-212 (332)
63 1zlp_A PSR132, petal death pro 77.8 2.2 7.6E-05 44.8 5.3 45 81-129 189-233 (318)
64 1zlp_A PSR132, petal death pro 77.7 2.2 7.6E-05 44.8 5.3 45 419-467 189-233 (318)
65 3eoo_A Methylisocitrate lyase; 77.1 2.1 7.1E-05 44.7 4.8 44 82-129 172-215 (298)
66 1ydo_A HMG-COA lyase; TIM-barr 76.9 7.3 0.00025 40.6 9.0 133 322-488 88-224 (307)
67 3noy_A 4-hydroxy-3-methylbut-2 76.9 8.2 0.00028 41.0 9.2 146 419-582 46-202 (366)
68 3d0c_A Dihydrodipicolinate syn 76.8 20 0.00067 37.4 12.3 101 411-525 29-144 (314)
69 2rfg_A Dihydrodipicolinate syn 76.7 16 0.00053 37.8 11.4 142 411-579 17-175 (297)
70 1eye_A DHPS 1, dihydropteroate 76.6 25 0.00084 36.2 12.7 53 223-285 124-181 (280)
71 1aj0_A DHPS, dihydropteroate s 76.3 67 0.0023 32.9 15.9 171 384-583 14-207 (282)
72 2qjg_A Putative aldolase MJ040 76.1 45 0.0015 33.3 14.6 119 423-560 103-232 (273)
73 2wkj_A N-acetylneuraminate lya 75.9 17 0.00059 37.6 11.5 142 411-579 28-187 (303)
74 1f8m_A Isocitrate lyase, ICL; 75.9 34 0.0012 37.3 14.1 135 421-562 165-345 (429)
75 3qze_A DHDPS, dihydrodipicolin 75.9 18 0.0006 37.7 11.6 143 411-580 40-199 (314)
76 1s2w_A Phosphoenolpyruvate pho 75.9 2.1 7.3E-05 44.5 4.5 46 81-128 170-216 (295)
77 2v9d_A YAGE; dihydrodipicolini 75.8 16 0.00054 38.6 11.3 144 411-580 48-208 (343)
78 3eoo_A Methylisocitrate lyase; 75.8 2.3 8E-05 44.3 4.8 46 418-467 170-215 (298)
79 3b4u_A Dihydrodipicolinate syn 75.8 25 0.00084 36.2 12.6 144 411-580 20-185 (294)
80 1xg4_A Probable methylisocitra 75.0 2.5 8.6E-05 44.0 4.7 45 419-467 167-211 (295)
81 3e96_A Dihydrodipicolinate syn 75.0 14 0.00049 38.4 10.7 102 411-526 29-145 (316)
82 2ftp_A Hydroxymethylglutaryl-C 74.6 42 0.0014 34.5 14.1 131 324-488 92-226 (302)
83 3si9_A DHDPS, dihydrodipicolin 74.1 17 0.00059 37.8 11.0 144 411-580 39-199 (315)
84 1xg4_A Probable methylisocitra 74.0 2.6 8.9E-05 43.9 4.5 45 81-129 167-211 (295)
85 1jub_A Dihydroorotate dehydrog 74.0 9.5 0.00032 39.3 8.9 96 88-210 30-156 (311)
86 4dpp_A DHDPS 2, dihydrodipicol 73.8 18 0.00062 38.5 11.2 92 48-164 63-162 (360)
87 3s5o_A 4-hydroxy-2-oxoglutarat 73.7 27 0.00092 36.2 12.3 142 411-579 31-191 (307)
88 2cw6_A Hydroxymethylglutaryl-C 73.4 14 0.00046 38.2 9.9 133 322-488 87-223 (298)
89 3dz1_A Dihydrodipicolinate syn 73.3 18 0.00062 37.6 10.9 145 411-581 25-187 (313)
90 1tx2_A DHPS, dihydropteroate s 73.3 54 0.0019 33.9 14.4 44 82-125 64-119 (297)
91 2e6f_A Dihydroorotate dehydrog 73.2 16 0.00053 37.7 10.4 113 425-562 31-192 (314)
92 3lye_A Oxaloacetate acetyl hyd 73.2 4.6 0.00016 42.2 6.2 44 83-129 180-223 (307)
93 4ef8_A Dihydroorotate dehydrog 73.1 6.4 0.00022 41.9 7.4 64 120-210 125-191 (354)
94 1f6k_A N-acetylneuraminate lya 73.1 23 0.00077 36.4 11.5 142 411-579 20-179 (293)
95 3daq_A DHDPS, dihydrodipicolin 72.7 22 0.00075 36.5 11.3 139 419-580 23-178 (292)
96 1s2w_A Phosphoenolpyruvate pho 72.0 3.8 0.00013 42.6 5.2 45 419-465 170-215 (295)
97 3h5d_A DHDPS, dihydrodipicolin 71.9 22 0.00075 36.9 11.1 143 411-579 24-182 (311)
98 4ay7_A Methylcobalamin\: coenz 71.6 90 0.0031 32.5 16.0 82 424-515 254-343 (348)
99 2vp8_A Dihydropteroate synthas 71.5 5.7 0.0002 41.7 6.5 54 223-286 160-222 (318)
100 3nav_A Tryptophan synthase alp 71.5 39 0.0013 34.4 12.7 114 313-461 32-152 (271)
101 3lye_A Oxaloacetate acetyl hyd 71.4 5.3 0.00018 41.7 6.2 87 419-516 178-266 (307)
102 2nuw_A 2-keto-3-deoxygluconate 71.1 44 0.0015 34.1 13.1 136 411-578 16-167 (288)
103 2nx9_A Oxaloacetate decarboxyl 71.0 73 0.0025 35.0 15.5 96 423-526 104-209 (464)
104 2hjp_A Phosphonopyruvate hydro 70.5 3.3 0.00011 43.0 4.3 46 82-129 167-213 (290)
105 3k13_A 5-methyltetrahydrofolat 70.3 1.3 4.4E-05 46.3 1.2 53 614-667 4-57 (300)
106 3ih1_A Methylisocitrate lyase; 70.3 3.4 0.00012 43.2 4.4 44 82-129 176-219 (305)
107 3rpd_A Methionine synthase (B1 69.9 26 0.00088 37.2 11.3 146 76-236 166-329 (357)
108 4hb7_A Dihydropteroate synthas 69.9 34 0.0012 35.0 11.6 166 384-581 6-190 (270)
109 4fxs_A Inosine-5'-monophosphat 69.5 16 0.00053 40.7 9.9 66 423-502 284-364 (496)
110 2qjg_A Putative aldolase MJ040 68.8 50 0.0017 33.0 12.8 114 85-210 103-229 (273)
111 1l6s_A Porphobilinogen synthas 68.6 77 0.0026 32.9 13.8 182 358-562 97-308 (323)
112 1h7n_A 5-aminolaevulinic acid 68.3 1.2E+02 0.0041 31.7 16.4 225 315-563 69-327 (342)
113 1w3i_A EDA, 2-keto-3-deoxy glu 68.3 61 0.0021 33.1 13.5 137 411-578 16-168 (293)
114 2r91_A 2-keto-3-deoxy-(6-phosp 68.0 47 0.0016 33.9 12.5 137 411-578 15-167 (286)
115 3vnd_A TSA, tryptophan synthas 67.5 58 0.002 33.1 12.9 162 315-523 32-211 (267)
116 3usb_A Inosine-5'-monophosphat 67.5 21 0.00072 39.8 10.4 120 314-502 255-389 (511)
117 3eb2_A Putative dihydrodipicol 67.2 23 0.00078 36.6 10.0 143 411-580 21-180 (300)
118 3ih1_A Methylisocitrate lyase; 67.1 3.7 0.00013 42.9 3.9 86 419-516 175-262 (305)
119 4dpp_A DHDPS 2, dihydrodipicol 67.0 42 0.0014 35.7 12.1 117 386-527 63-192 (360)
120 2dqw_A Dihydropteroate synthas 66.9 17 0.0006 37.6 8.9 53 223-285 146-201 (294)
121 1rqb_A Transcarboxylase 5S sub 66.8 90 0.0031 35.0 15.3 96 423-526 121-228 (539)
122 2ze3_A DFA0005; organic waste 66.7 7.8 0.00027 39.8 6.2 41 418-462 167-207 (275)
123 2y88_A Phosphoribosyl isomeras 66.6 8.6 0.00029 37.9 6.4 138 421-578 33-190 (244)
124 2hjp_A Phosphonopyruvate hydro 66.6 4 0.00014 42.3 4.0 43 421-465 168-211 (290)
125 1jub_A Dihydroorotate dehydrog 66.6 45 0.0016 34.1 12.2 115 423-562 27-189 (311)
126 3qfe_A Putative dihydrodipicol 66.4 50 0.0017 34.3 12.5 145 411-580 28-191 (318)
127 2e6f_A Dihydroorotate dehydrog 66.0 11 0.00038 38.9 7.3 96 88-210 32-158 (314)
128 3oix_A Putative dihydroorotate 66.0 13 0.00045 39.4 7.9 64 120-210 127-191 (345)
129 1o66_A 3-methyl-2-oxobutanoate 65.8 91 0.0031 31.9 13.9 92 426-523 102-201 (275)
130 3q58_A N-acetylmannosamine-6-p 65.8 8.1 0.00028 38.5 6.0 66 83-164 90-157 (229)
131 3fa4_A 2,3-dimethylmalate lyas 65.7 55 0.0019 34.0 12.4 136 423-581 99-255 (302)
132 2nx9_A Oxaloacetate decarboxyl 65.4 52 0.0018 36.2 12.9 95 85-210 104-199 (464)
133 2eja_A URO-D, UPD, uroporphyri 65.2 88 0.003 32.3 14.2 140 415-583 175-335 (338)
134 3igs_A N-acetylmannosamine-6-p 64.4 9.2 0.00032 38.1 6.1 66 84-165 91-158 (232)
135 2ftp_A Hydroxymethylglutaryl-C 64.4 87 0.003 32.1 13.8 108 10-150 115-226 (302)
136 4hb7_A Dihydropteroate synthas 64.2 52 0.0018 33.5 11.7 45 84-128 33-86 (270)
137 1eye_A DHPS 1, dihydropteroate 63.8 1.3E+02 0.0046 30.6 16.5 169 384-581 5-197 (280)
138 1ydn_A Hydroxymethylglutaryl-C 63.7 62 0.0021 32.9 12.5 133 322-488 86-222 (295)
139 2pcq_A Putative dihydrodipicol 63.4 27 0.00091 35.7 9.5 77 73-165 15-97 (283)
140 3r89_A Orotidine 5'-phosphate 63.4 15 0.00052 38.0 7.6 159 413-581 41-218 (290)
141 1ur4_A Galactanase; hydrolase, 63.2 1.7E+02 0.0056 31.5 17.3 87 74-166 130-235 (399)
142 3ewb_X 2-isopropylmalate synth 62.6 48 0.0016 34.1 11.3 137 314-488 79-220 (293)
143 2uwf_A Endoxylanase, alkaline 62.4 35 0.0012 36.2 10.5 51 80-131 201-259 (356)
144 1qop_A Tryptophan synthase alp 61.9 1.1E+02 0.0039 30.5 13.9 92 83-181 33-147 (268)
145 3qja_A IGPS, indole-3-glycerol 60.7 24 0.00084 35.9 8.6 62 86-164 127-190 (272)
146 1w1z_A Delta-aminolevulinic ac 60.3 1E+02 0.0034 32.1 12.9 182 358-562 103-315 (328)
147 2ekc_A AQ_1548, tryptophan syn 59.9 86 0.0029 31.4 12.5 92 83-181 33-147 (262)
148 3ist_A Glutamate racemase; str 59.8 17 0.00057 37.1 7.1 140 410-568 45-189 (269)
149 2cw6_A Hydroxymethylglutaryl-C 59.8 1.1E+02 0.0039 31.1 13.6 63 82-150 157-223 (298)
150 2hmc_A AGR_L_411P, dihydrodipi 59.7 45 0.0015 35.1 10.7 144 411-581 43-201 (344)
151 1f6y_A 5-methyltetrahydrofolat 59.5 61 0.0021 32.7 11.3 40 85-124 29-72 (262)
152 3rmj_A 2-isopropylmalate synth 59.5 19 0.00066 38.4 7.9 138 313-488 85-227 (370)
153 3ble_A Citramalate synthase fr 59.3 56 0.0019 34.2 11.3 130 322-488 103-236 (337)
154 3b8i_A PA4872 oxaloacetate dec 59.2 6.1 0.00021 40.9 3.7 39 421-463 170-208 (287)
155 4ay7_A Methylcobalamin\: coenz 59.1 1.5E+02 0.0051 30.8 14.7 43 541-583 300-346 (348)
156 1z41_A YQJM, probable NADH-dep 58.9 1.1E+02 0.0036 31.9 13.4 91 73-165 133-251 (338)
157 4h3d_A 3-dehydroquinate dehydr 57.9 1.2E+02 0.0042 30.4 13.2 147 413-576 30-188 (258)
158 2ze3_A DFA0005; organic waste 57.5 8.9 0.0003 39.4 4.6 41 81-125 168-208 (275)
159 3tr9_A Dihydropteroate synthas 57.3 46 0.0016 34.7 10.1 52 223-285 148-203 (314)
160 1ydn_A Hydroxymethylglutaryl-C 57.0 45 0.0015 34.0 10.0 43 166-210 153-196 (295)
161 1vhn_A Putative flavin oxidore 57.0 28 0.00097 36.0 8.5 108 92-234 26-137 (318)
162 2p10_A MLL9387 protein; putati 56.7 1.2E+02 0.0041 31.2 12.7 84 411-503 10-129 (286)
163 3ovp_A Ribulose-phosphate 3-ep 56.3 34 0.0012 33.8 8.6 50 421-470 19-75 (228)
164 3inp_A D-ribulose-phosphate 3- 55.4 57 0.0019 32.7 10.1 50 421-470 42-97 (246)
165 3b0p_A TRNA-dihydrouridine syn 55.1 1E+02 0.0034 32.3 12.5 160 312-515 67-242 (350)
166 3hgj_A Chromate reductase; TIM 54.9 92 0.0032 32.6 12.2 91 73-165 141-261 (349)
167 3b8i_A PA4872 oxaloacetate dec 54.4 8.3 0.00028 39.9 3.8 39 83-125 170-208 (287)
168 1tqj_A Ribulose-phosphate 3-ep 53.6 41 0.0014 33.2 8.7 50 421-470 19-73 (230)
169 1w5q_A Delta-aminolevulinic ac 53.3 2.2E+02 0.0074 29.8 15.7 224 315-563 66-322 (337)
170 3ffs_A Inosine-5-monophosphate 53.3 63 0.0021 34.8 10.6 66 84-163 146-212 (400)
171 1to3_A Putative aldolase YIHT; 53.2 1.5E+02 0.0053 30.4 13.3 77 87-165 114-199 (304)
172 3fa4_A 2,3-dimethylmalate lyas 52.9 12 0.0004 39.0 4.6 44 83-129 172-215 (302)
173 3kru_A NADH:flavin oxidoreduct 52.6 1.3E+02 0.0045 31.5 12.9 135 77-232 37-219 (343)
174 3mcm_A 2-amino-4-hydroxy-6-hyd 52.4 77 0.0026 34.6 11.2 163 383-573 189-378 (442)
175 4g9p_A 4-hydroxy-3-methylbut-2 51.9 60 0.002 35.0 9.9 81 419-502 38-146 (406)
176 1ydo_A HMG-COA lyase; TIM-barr 51.9 79 0.0027 32.6 10.8 64 81-150 157-224 (307)
177 3o1n_A 3-dehydroquinate dehydr 51.2 1E+02 0.0035 31.3 11.4 78 82-165 120-198 (276)
178 1h5y_A HISF; histidine biosynt 51.1 60 0.002 31.4 9.5 83 421-516 35-124 (253)
179 3nav_A Tryptophan synthase alp 51.0 1.3E+02 0.0044 30.6 12.0 123 421-582 36-175 (271)
180 1zuw_A Glutamate racemase 1; ( 50.8 81 0.0028 31.8 10.6 150 411-580 44-199 (272)
181 2y5s_A DHPS, dihydropteroate s 50.0 20 0.00067 37.2 5.8 54 223-286 140-198 (294)
182 3paj_A Nicotinate-nucleotide p 49.7 39 0.0013 35.3 8.0 62 86-164 243-304 (320)
183 2gzm_A Glutamate racemase; enz 49.5 1.1E+02 0.0037 30.7 11.3 150 411-580 44-198 (267)
184 2uwf_A Endoxylanase, alkaline 49.5 76 0.0026 33.5 10.5 52 417-469 200-259 (356)
185 3b0p_A TRNA-dihydrouridine syn 49.3 18 0.00063 38.1 5.6 93 93-210 27-124 (350)
186 3obk_A Delta-aminolevulinic ac 49.3 2.6E+02 0.0088 29.4 14.5 226 315-563 73-330 (356)
187 2w6r_A Imidazole glycerol phos 49.0 89 0.003 30.9 10.5 45 425-469 89-137 (266)
188 2dep_A Xylanase B, thermostabl 48.9 1.1E+02 0.0038 32.2 11.6 51 80-131 200-258 (356)
189 4fo4_A Inosine 5'-monophosphat 47.9 42 0.0014 35.8 8.1 66 83-162 109-176 (366)
190 1rqb_A Transcarboxylase 5S sub 47.7 1.4E+02 0.0048 33.4 12.6 94 86-210 122-216 (539)
191 3ixl_A Amdase, arylmalonate de 47.6 1.2E+02 0.0041 30.0 11.1 149 410-580 41-204 (240)
192 1w32_A Endo-1,4-beta-xylanase 47.5 1.2E+02 0.0041 31.8 11.6 50 81-131 192-251 (348)
193 1r3s_A URO-D, uroporphyrinogen 47.4 2.4E+02 0.0083 29.4 14.1 81 425-514 269-356 (367)
194 3ist_A Glutamate racemase; str 46.8 43 0.0015 34.0 7.7 50 73-125 46-95 (269)
195 1ypx_A Putative vitamin-B12 in 46.4 47 0.0016 35.3 8.3 154 76-242 162-344 (375)
196 1rd5_A Tryptophan synthase alp 46.1 2.3E+02 0.0078 27.9 13.2 76 506-581 80-167 (262)
197 1f76_A Dihydroorotate dehydrog 45.5 1.1E+02 0.0037 31.6 10.8 100 89-210 73-200 (336)
198 1tqx_A D-ribulose-5-phosphate 45.4 69 0.0024 31.6 8.8 91 421-513 20-135 (227)
199 2ekc_A AQ_1548, tryptophan syn 45.2 2.2E+02 0.0074 28.4 12.7 89 421-516 33-144 (262)
200 3r2g_A Inosine 5'-monophosphat 45.1 1.1E+02 0.0037 32.5 10.7 29 310-338 94-122 (361)
201 1qop_A Tryptophan synthase alp 45.1 2.5E+02 0.0084 28.0 14.0 89 421-516 33-144 (268)
202 3gr7_A NADPH dehydrogenase; fl 45.0 1.2E+02 0.004 31.7 11.0 91 73-165 133-251 (340)
203 3fok_A Uncharacterized protein 45.0 2.8E+02 0.0094 28.7 13.4 67 83-161 73-146 (307)
204 2ztj_A Homocitrate synthase; ( 44.7 3.1E+02 0.01 29.0 14.9 127 322-488 81-212 (382)
205 2qiw_A PEP phosphonomutase; st 44.5 1E+02 0.0036 30.9 10.1 99 422-522 96-208 (255)
206 3l0g_A Nicotinate-nucleotide p 44.5 27 0.00091 36.3 5.7 63 85-164 218-280 (300)
207 3k30_A Histamine dehydrogenase 44.4 2E+02 0.0069 32.7 13.9 112 91-210 54-220 (690)
208 2qiw_A PEP phosphonomutase; st 44.4 9.7 0.00033 38.6 2.4 39 83-125 170-208 (255)
209 3mcm_A 2-amino-4-hydroxy-6-hyd 44.0 1.9E+02 0.0065 31.5 12.6 53 223-286 315-371 (442)
210 3tha_A Tryptophan synthase alp 43.6 1.6E+02 0.0056 29.5 11.3 125 419-582 28-166 (252)
211 3i4e_A Isocitrate lyase; struc 43.5 27 0.00092 38.1 5.7 82 421-529 273-356 (439)
212 1ka9_F Imidazole glycerol phos 43.4 74 0.0025 31.1 8.8 145 421-580 33-195 (252)
213 2yr1_A 3-dehydroquinate dehydr 43.1 2.7E+02 0.0091 27.8 13.9 147 413-580 30-192 (257)
214 1qpo_A Quinolinate acid phosph 43.1 42 0.0015 34.4 7.0 65 85-164 205-270 (284)
215 1jcn_A Inosine monophosphate d 43.0 1.3E+02 0.0046 33.0 11.7 25 313-338 253-277 (514)
216 3tqv_A Nicotinate-nucleotide p 42.9 29 0.001 35.8 5.7 61 86-163 210-270 (287)
217 1j93_A UROD, uroporphyrinogen 42.9 2.1E+02 0.0071 29.6 12.6 142 415-583 189-351 (353)
218 3vav_A 3-methyl-2-oxobutanoate 42.7 33 0.0011 35.2 6.0 56 76-141 169-224 (275)
219 1ps9_A 2,4-dienoyl-COA reducta 42.5 2.2E+02 0.0077 32.2 13.8 136 414-563 36-246 (671)
220 4fo4_A Inosine 5'-monophosphat 42.2 81 0.0028 33.5 9.3 45 421-465 109-155 (366)
221 1pv8_A Delta-aminolevulinic ac 42.2 1.2E+02 0.0042 31.6 10.1 224 315-562 59-315 (330)
222 1to3_A Putative aldolase YIHT; 42.1 1.9E+02 0.0066 29.7 11.9 45 81-125 177-226 (304)
223 2qf7_A Pyruvate carboxylase pr 42.0 1.9E+02 0.0065 35.5 13.6 133 422-570 648-796 (1165)
224 3eeg_A 2-isopropylmalate synth 41.3 16 0.00056 38.2 3.6 138 313-488 79-221 (325)
225 3ndo_A Deoxyribose-phosphate a 41.2 40 0.0014 33.6 6.2 27 312-338 143-170 (231)
226 3tsm_A IGPS, indole-3-glycerol 40.9 78 0.0027 32.2 8.5 65 86-166 134-199 (272)
227 4fxs_A Inosine-5'-monophosphat 40.8 1.1E+02 0.0037 33.8 10.4 58 383-464 218-277 (496)
228 4e38_A Keto-hydroxyglutarate-a 40.6 1.3E+02 0.0045 29.8 9.9 100 422-561 96-198 (232)
229 3eol_A Isocitrate lyase; seatt 40.3 27 0.00092 38.1 5.1 35 421-456 268-303 (433)
230 3hgj_A Chromate reductase; TIM 40.0 1.8E+02 0.0062 30.3 11.6 152 410-581 140-336 (349)
231 1nvm_A HOA, 4-hydroxy-2-oxoval 40.0 1.1E+02 0.0038 31.9 9.9 43 166-210 147-190 (345)
232 1u1j_A 5-methyltetrahydroptero 39.9 2.9E+02 0.0098 32.2 14.3 134 414-569 181-331 (765)
233 3uhf_A Glutamate racemase; str 39.8 43 0.0015 34.2 6.4 50 73-125 65-114 (274)
234 2b7n_A Probable nicotinate-nuc 39.6 44 0.0015 34.0 6.4 62 87-163 195-257 (273)
235 1thf_D HISF protein; thermophI 39.5 1.7E+02 0.0058 28.5 10.7 144 422-580 33-194 (253)
236 3f4w_A Putative hexulose 6 pho 39.4 1.1E+02 0.0037 29.0 9.0 65 87-163 70-134 (211)
237 1oy0_A Ketopantoate hydroxymet 39.2 1.7E+02 0.0057 30.0 10.6 81 82-166 114-202 (281)
238 2vp8_A Dihydropteroate synthas 38.9 2.6E+02 0.0088 29.0 12.3 171 384-582 41-238 (318)
239 1eep_A Inosine 5'-monophosphat 38.8 1.6E+02 0.0055 31.3 11.1 65 84-162 155-221 (404)
240 3o1n_A 3-dehydroquinate dehydr 38.8 1.7E+02 0.006 29.6 10.8 102 420-527 120-230 (276)
241 3vav_A 3-methyl-2-oxobutanoate 38.7 23 0.00078 36.4 4.1 54 417-479 171-224 (275)
242 2jfq_A Glutamate racemase; cel 38.6 83 0.0028 32.0 8.4 150 411-580 63-218 (286)
243 3lg3_A Isocitrate lyase; conse 38.5 35 0.0012 37.1 5.7 35 421-456 273-308 (435)
244 1tx2_A DHPS, dihydropteroate s 38.5 3.4E+02 0.012 27.8 15.4 162 384-583 39-226 (297)
245 3vni_A Xylose isomerase domain 38.5 1E+02 0.0035 30.5 9.1 67 77-149 128-202 (294)
246 3igs_A N-acetylmannosamine-6-p 38.4 2E+02 0.0067 28.3 10.9 88 82-181 37-129 (232)
247 1us2_A Xylanase10C, endo-beta- 38.3 1.9E+02 0.0064 32.3 11.8 51 80-131 359-417 (530)
248 1f8m_A Isocitrate lyase, ICL; 38.0 27 0.00093 38.0 4.7 81 421-529 269-352 (429)
249 3out_A Glutamate racemase; str 37.9 58 0.002 33.0 7.0 50 73-125 48-98 (268)
250 2vvt_A Glutamate racemase; iso 37.7 1E+02 0.0035 31.4 9.0 150 411-580 65-219 (290)
251 2y5s_A DHPS, dihydropteroate s 37.6 2.8E+02 0.0096 28.4 12.2 173 385-584 23-217 (294)
252 3vnd_A TSA, tryptophan synthas 37.6 2.2E+02 0.0077 28.6 11.4 123 421-582 34-173 (267)
253 1o4u_A Type II quinolic acid p 37.5 40 0.0014 34.7 5.7 64 86-164 205-269 (285)
254 4af0_A Inosine-5'-monophosphat 37.5 1.2E+02 0.0039 34.2 9.7 46 421-466 282-329 (556)
255 3r2g_A Inosine 5'-monophosphat 37.5 1.2E+02 0.0042 32.0 9.7 67 82-162 100-168 (361)
256 3khj_A Inosine-5-monophosphate 37.4 1.3E+02 0.0045 31.8 10.0 65 84-162 107-172 (361)
257 4h3d_A 3-dehydroquinate dehydr 37.4 2.4E+02 0.0083 28.1 11.6 101 421-527 101-210 (258)
258 1ur1_A Endoxylanase; hydrolase 37.0 67 0.0023 34.3 7.6 50 81-131 209-266 (378)
259 1rpx_A Protein (ribulose-phosp 37.0 1E+02 0.0035 29.8 8.5 85 83-179 25-116 (230)
260 1v0l_A Endo-1,4-beta-xylanase 36.7 1.3E+02 0.0043 31.1 9.5 50 81-131 183-240 (313)
261 3rpd_A Methionine synthase (B1 36.6 98 0.0034 32.7 8.8 141 414-568 166-327 (357)
262 2yci_X 5-methyltetrahydrofolat 36.5 3.5E+02 0.012 27.3 12.9 40 86-125 39-82 (271)
263 4dnh_A Uncharacterized protein 36.4 1.2E+02 0.0039 32.0 8.8 128 10-166 89-235 (396)
264 1vzw_A Phosphoribosyl isomeras 36.4 1.8E+02 0.0061 28.2 10.3 75 85-166 88-169 (244)
265 3oa3_A Aldolase; structural ge 36.2 60 0.0021 33.4 6.8 27 311-338 185-212 (288)
266 1u1j_A 5-methyltetrahydroptero 36.1 3.2E+02 0.011 31.9 13.8 137 76-235 181-331 (765)
267 4g9p_A 4-hydroxy-3-methylbut-2 36.1 42 0.0014 36.1 5.7 49 82-131 39-91 (406)
268 1y0e_A Putative N-acetylmannos 35.9 2.2E+02 0.0075 27.1 10.7 66 85-165 79-148 (223)
269 3ewb_X 2-isopropylmalate synth 35.7 3.3E+02 0.011 27.7 12.4 66 81-150 150-220 (293)
270 2dwu_A Glutamate racemase; iso 35.6 1.1E+02 0.0037 30.9 8.7 150 411-580 48-202 (276)
271 1j93_A UROD, uroporphyrinogen 35.5 64 0.0022 33.6 7.2 23 427-449 262-284 (353)
272 3f4w_A Putative hexulose 6 pho 35.5 2.8E+02 0.0097 26.0 14.0 128 423-580 17-157 (211)
273 1f76_A Dihydroorotate dehydrog 35.4 3E+02 0.01 28.1 12.4 122 426-563 72-243 (336)
274 1vrd_A Inosine-5'-monophosphat 35.3 2.2E+02 0.0074 31.1 11.7 68 83-164 238-307 (494)
275 3ffs_A Inosine-5-monophosphate 35.2 1.6E+02 0.0054 31.7 10.2 43 422-464 146-189 (400)
276 4avf_A Inosine-5'-monophosphat 35.0 1.6E+02 0.0054 32.4 10.5 45 421-465 230-276 (490)
277 1x1o_A Nicotinate-nucleotide p 34.7 76 0.0026 32.6 7.3 56 90-162 212-267 (286)
278 2jbm_A Nicotinate-nucleotide p 34.3 54 0.0018 33.9 6.2 62 87-163 210-272 (299)
279 2eja_A URO-D, UPD, uroporphyri 34.3 1.2E+02 0.0041 31.3 9.0 28 424-451 244-271 (338)
280 2z6i_A Trans-2-enoyl-ACP reduc 34.0 1.8E+02 0.0062 30.0 10.3 78 87-175 29-107 (332)
281 1r85_A Endo-1,4-beta-xylanase; 33.9 75 0.0026 33.9 7.4 50 81-131 212-269 (379)
282 3cyv_A URO-D, UPD, uroporphyri 33.7 2.3E+02 0.0078 29.3 11.1 144 414-584 182-349 (354)
283 3qja_A IGPS, indole-3-glycerol 33.6 2.2E+02 0.0074 28.8 10.5 62 424-502 127-190 (272)
284 3ble_A Citramalate synthase fr 33.2 2.3E+02 0.0079 29.4 11.0 64 81-150 169-236 (337)
285 2pcq_A Putative dihydrodipicol 33.1 64 0.0022 32.8 6.5 138 411-578 15-166 (283)
286 3bg3_A Pyruvate carboxylase, m 33.0 2.8E+02 0.0095 32.2 12.5 97 86-210 202-302 (718)
287 3gnn_A Nicotinate-nucleotide p 32.8 65 0.0022 33.3 6.4 62 86-164 221-282 (298)
288 1m3u_A 3-methyl-2-oxobutanoate 32.5 60 0.002 33.0 6.0 53 80-141 160-212 (264)
289 4ab4_A Xenobiotic reductase B; 32.3 1.9E+02 0.0066 30.5 10.2 81 418-514 241-324 (362)
290 2r14_A Morphinone reductase; H 32.0 4.5E+02 0.015 27.6 13.2 81 420-513 256-343 (377)
291 3gr7_A NADPH dehydrogenase; fl 31.9 2.7E+02 0.0094 28.9 11.3 152 410-581 132-325 (340)
292 2a4a_A Deoxyribose-phosphate a 31.8 36 0.0012 35.0 4.3 29 310-338 167-196 (281)
293 2xed_A Putative maleate isomer 31.8 1.8E+02 0.006 29.3 9.5 149 411-580 66-232 (273)
294 3r12_A Deoxyribose-phosphate a 31.7 64 0.0022 32.7 6.0 25 314-338 172-197 (260)
295 3uhf_A Glutamate racemase; str 31.4 46 0.0016 34.0 5.0 51 410-463 64-114 (274)
296 1qpo_A Quinolinate acid phosph 31.4 78 0.0027 32.4 6.7 45 423-468 205-250 (284)
297 1o66_A 3-methyl-2-oxobutanoate 30.9 4.4E+02 0.015 26.8 13.5 74 89-166 103-184 (275)
298 3hbl_A Pyruvate carboxylase; T 30.9 4.3E+02 0.015 32.4 14.2 98 425-527 633-744 (1150)
299 4avf_A Inosine-5'-monophosphat 30.9 1.2E+02 0.004 33.4 8.6 66 83-162 230-297 (490)
300 1ta3_B Endo-1,4-beta-xylanase; 30.9 2.8E+02 0.0095 28.3 11.0 51 80-131 183-242 (303)
301 3l5l_A Xenobiotic reductase A; 30.6 1.8E+02 0.0062 30.5 9.7 91 73-165 147-268 (363)
302 3q58_A N-acetylmannosamine-6-p 30.4 2.8E+02 0.0096 27.1 10.5 88 82-181 37-129 (229)
303 1xyz_A 1,4-beta-D-xylan-xylano 30.4 2.5E+02 0.0084 29.3 10.6 49 81-130 209-267 (347)
304 3out_A Glutamate racemase; str 30.3 55 0.0019 33.2 5.3 51 410-463 47-98 (268)
305 3m47_A Orotidine 5'-phosphate 30.3 2.3E+02 0.0079 27.6 9.9 108 301-454 64-171 (228)
306 2inf_A URO-D, UPD, uroporphyri 30.3 2.7E+02 0.0094 28.8 11.1 24 425-448 258-281 (359)
307 1zuw_A Glutamate racemase 1; ( 30.0 2.9E+02 0.0099 27.6 10.8 49 74-125 45-94 (272)
308 1o4u_A Type II quinolic acid p 30.0 96 0.0033 31.8 7.1 46 424-470 205-251 (285)
309 3niy_A Endo-1,4-beta-xylanase; 29.9 3.7E+02 0.013 28.0 11.9 47 81-128 203-256 (341)
310 1n82_A Xylanase, intra-cellula 29.9 97 0.0033 32.2 7.3 51 80-131 187-245 (331)
311 2gzm_A Glutamate racemase; enz 29.8 1.1E+02 0.0038 30.6 7.6 49 74-125 45-93 (267)
312 2b7n_A Probable nicotinate-nuc 29.7 73 0.0025 32.3 6.2 38 430-468 200-238 (273)
313 3qw4_B UMP synthase; N-termina 29.6 1.3E+02 0.0045 32.8 8.6 156 414-582 28-194 (453)
314 1qo2_A Molecule: N-((5-phospho 29.6 2.3E+02 0.0079 27.4 9.8 137 423-581 34-188 (241)
315 4dnh_A Uncharacterized protein 29.6 99 0.0034 32.4 6.9 141 348-515 89-246 (396)
316 1i4n_A Indole-3-glycerol phosp 29.5 1.7E+02 0.006 29.2 8.8 65 86-166 115-181 (251)
317 3paj_A Nicotinate-nucleotide p 29.4 90 0.0031 32.6 6.8 61 425-502 244-304 (320)
318 1jcn_A Inosine monophosphate d 29.1 3.6E+02 0.012 29.5 12.3 66 83-162 256-323 (514)
319 3rmj_A 2-isopropylmalate synth 29.0 3.3E+02 0.011 28.8 11.4 66 81-150 157-227 (370)
320 3t7v_A Methylornithine synthas 28.9 1.1E+02 0.0039 31.5 7.7 16 272-287 289-304 (350)
321 2oho_A Glutamate racemase; iso 28.8 2.9E+02 0.0098 27.6 10.5 49 74-125 54-102 (273)
322 2jbm_A Nicotinate-nucleotide p 28.8 78 0.0027 32.6 6.2 39 429-468 214-253 (299)
323 2inf_A URO-D, UPD, uroporphyri 28.7 4.6E+02 0.016 27.1 12.5 141 415-584 189-350 (359)
324 3ctl_A D-allulose-6-phosphate 28.5 1.1E+02 0.0037 30.2 7.1 144 422-579 16-187 (231)
325 3jr2_A Hexulose-6-phosphate sy 28.4 3.9E+02 0.013 25.4 11.5 84 86-181 24-109 (218)
326 3tr9_A Dihydropteroate synthas 28.1 5.2E+02 0.018 26.7 17.4 168 384-581 27-222 (314)
327 1ep3_A Dihydroorotate dehydrog 28.1 3.2E+02 0.011 27.3 10.9 72 113-210 89-162 (311)
328 3bo9_A Putative nitroalkan dio 28.0 3.5E+02 0.012 27.7 11.3 76 86-171 42-117 (326)
329 3gka_A N-ethylmaleimide reduct 27.9 2E+02 0.007 30.3 9.5 81 418-515 249-333 (361)
330 1m3u_A 3-methyl-2-oxobutanoate 27.8 50 0.0017 33.6 4.5 80 385-478 131-211 (264)
331 2jfq_A Glutamate racemase; cel 27.2 2.8E+02 0.0094 28.0 10.1 49 74-125 64-112 (286)
332 2yr1_A 3-dehydroquinate dehydr 27.1 2.6E+02 0.009 27.9 9.7 77 82-165 101-178 (257)
333 3tqv_A Nicotinate-nucleotide p 26.9 94 0.0032 32.0 6.3 42 424-468 210-251 (287)
334 2bmb_A Folic acid synthesis pr 26.9 3.6E+02 0.012 30.2 11.5 20 223-242 356-375 (545)
335 1nq6_A XYS1; glycoside hydrola 26.9 2.1E+02 0.0071 29.0 9.2 49 82-131 183-239 (302)
336 1tqj_A Ribulose-phosphate 3-ep 26.9 1.3E+02 0.0044 29.4 7.3 85 83-179 19-110 (230)
337 1f6y_A 5-methyltetrahydrofolat 26.6 4.9E+02 0.017 25.9 13.8 117 422-560 28-153 (262)
338 1rpx_A Protein (ribulose-phosp 26.6 1.8E+02 0.0062 28.0 8.3 50 421-470 25-79 (230)
339 2vvt_A Glutamate racemase; iso 26.5 1.3E+02 0.0046 30.5 7.6 50 73-125 65-114 (290)
340 3inp_A D-ribulose-phosphate 3- 26.5 1E+02 0.0034 30.9 6.4 86 84-181 43-134 (246)
341 1qap_A Quinolinic acid phospho 26.3 99 0.0034 31.8 6.5 61 86-163 220-280 (296)
342 2yci_X 5-methyltetrahydrofolat 26.3 4.2E+02 0.014 26.7 11.1 164 385-580 11-189 (271)
343 1nvm_A HOA, 4-hydroxy-2-oxoval 26.3 3.9E+02 0.013 27.6 11.3 92 425-526 99-202 (345)
344 1vhn_A Putative flavin oxidore 26.3 3.1E+02 0.011 28.0 10.4 110 430-562 26-157 (318)
345 1o94_A Tmadh, trimethylamine d 26.3 5.5E+02 0.019 29.4 13.6 122 77-210 39-212 (729)
346 2yim_A Probable alpha-methylac 26.2 86 0.003 33.2 6.2 78 306-421 56-133 (360)
347 2c6q_A GMP reductase 2; TIM ba 25.8 78 0.0027 33.3 5.7 65 86-164 174-253 (351)
348 3lab_A Putative KDPG (2-keto-3 25.8 2.9E+02 0.0099 27.1 9.4 113 423-575 76-198 (217)
349 3dxi_A Putative aldolase; TIM 25.8 2.3E+02 0.0079 29.3 9.3 90 430-526 98-194 (320)
350 1ur1_A Endoxylanase; hydrolase 25.7 1.3E+02 0.0045 31.9 7.6 51 418-469 208-266 (378)
351 2qgh_A Diaminopimelate decarbo 25.6 3.1E+02 0.01 29.2 10.6 75 88-165 118-205 (425)
352 3gnn_A Nicotinate-nucleotide p 25.5 1E+02 0.0034 31.9 6.3 41 425-468 222-262 (298)
353 2jfz_A Glutamate racemase; cel 25.5 97 0.0033 30.8 6.2 49 74-125 42-90 (255)
354 3tsm_A IGPS, indole-3-glycerol 25.2 4.8E+02 0.016 26.3 11.3 63 424-502 134-197 (272)
355 3khj_A Inosine-5-monophosphate 25.0 2.6E+02 0.009 29.4 9.7 67 85-166 60-127 (361)
356 1i1w_A Endo-1,4-beta-xylanase; 24.7 1.5E+02 0.0051 30.3 7.6 51 80-131 184-241 (303)
357 3emz_A Xylanase, endo-1,4-beta 24.6 1.2E+02 0.0042 31.6 6.9 48 80-128 186-240 (331)
358 3ivs_A Homocitrate synthase, m 24.4 5.1E+02 0.018 27.9 12.0 63 420-488 181-246 (423)
359 3kru_A NADH:flavin oxidoreduct 24.4 4.2E+02 0.014 27.6 11.1 89 73-164 132-250 (343)
360 1gte_A Dihydropyrimidine dehyd 24.3 2E+02 0.0068 34.7 9.6 65 120-210 633-701 (1025)
361 1eep_A Inosine 5'-monophosphat 24.1 3.7E+02 0.013 28.4 10.9 44 421-464 154-199 (404)
362 2w5f_A Endo-1,4-beta-xylanase 24.1 1.7E+02 0.0059 32.5 8.4 51 80-131 393-453 (540)
363 3ngj_A Deoxyribose-phosphate a 24.0 97 0.0033 31.0 5.7 25 314-338 156-181 (239)
364 2jfz_A Glutamate racemase; cel 23.9 1.3E+02 0.0044 29.8 6.8 50 411-463 41-90 (255)
365 3usb_A Inosine-5'-monophosphat 23.9 1.5E+02 0.0051 32.8 7.8 65 86-164 310-389 (511)
366 3ovp_A Ribulose-phosphate 3-ep 23.6 80 0.0027 31.1 5.0 86 84-181 20-112 (228)
367 1pii_A N-(5'phosphoribosyl)ant 23.4 2.7E+02 0.0092 30.4 9.6 65 86-166 122-187 (452)
368 4af0_A Inosine-5'-monophosphat 23.3 1.2E+02 0.004 34.1 6.6 48 82-129 281-330 (556)
369 3qw3_A Orotidine-5-phosphate d 23.2 1.7E+02 0.0058 29.3 7.4 113 458-582 75-193 (255)
370 3cui_A EXO-beta-1,4-glucanase; 23.1 2.1E+02 0.0072 29.2 8.4 47 80-127 180-232 (315)
371 1geq_A Tryptophan synthase alp 22.9 3.2E+02 0.011 26.4 9.4 95 83-228 97-196 (248)
372 3l0g_A Nicotinate-nucleotide p 22.6 1.2E+02 0.0041 31.4 6.2 43 423-468 218-260 (300)
373 2yv4_A Hypothetical protein PH 22.5 1.6E+02 0.0054 25.4 6.1 44 75-118 53-96 (105)
374 1twd_A Copper homeostasis prot 22.4 5.1E+02 0.018 26.0 10.7 76 74-162 67-147 (256)
375 1oy0_A Ketopantoate hydroxymet 22.4 6.3E+02 0.021 25.7 12.7 99 419-523 113-219 (281)
376 2dwu_A Glutamate racemase; iso 22.2 3E+02 0.01 27.5 9.2 49 74-125 49-97 (276)
377 1r85_A Endo-1,4-beta-xylanase; 22.2 1.7E+02 0.0057 31.2 7.5 52 418-470 211-270 (379)
378 1h1y_A D-ribulose-5-phosphate 22.2 1.4E+02 0.005 28.8 6.6 85 84-180 22-112 (228)
379 4ef8_A Dihydroorotate dehydrog 22.0 3E+02 0.01 28.9 9.4 81 458-560 125-223 (354)
380 2yv4_A Hypothetical protein PH 21.9 1.3E+02 0.0045 25.8 5.5 46 412-457 52-97 (105)
381 1y0e_A Putative N-acetylmannos 21.8 4E+02 0.014 25.1 9.7 87 82-180 24-116 (223)
382 2gjl_A Hypothetical protein PA 21.4 4.5E+02 0.015 26.7 10.6 77 86-168 31-108 (328)
383 2oho_A Glutamate racemase; iso 21.4 2.3E+02 0.0077 28.4 8.0 50 411-463 53-102 (273)
384 3ubm_A COAT2, formyl-COA:oxala 21.3 1.3E+02 0.0045 32.9 6.6 80 306-423 95-174 (456)
385 2y88_A Phosphoribosyl isomeras 21.0 1.2E+02 0.004 29.5 5.6 67 84-165 34-105 (244)
386 2bmb_A Folic acid synthesis pr 20.9 8.9E+02 0.031 26.9 13.9 123 383-531 223-369 (545)
387 2hk0_A D-psicose 3-epimerase; 20.9 3.3E+02 0.011 27.0 9.2 67 77-149 147-221 (309)
388 2wlt_A L-asparaginase; hydrola 20.8 2E+02 0.0069 29.9 7.7 50 85-135 233-285 (332)
389 1sfl_A 3-dehydroquinate dehydr 20.7 5.9E+02 0.02 24.8 12.5 100 419-524 83-192 (238)
390 1vrd_A Inosine-5'-monophosphat 20.5 1.1E+02 0.0036 33.6 5.7 14 87-100 292-305 (494)
391 1lc0_A Biliverdin reductase A; 20.4 1.3E+02 0.0044 30.4 5.9 44 82-127 77-122 (294)
392 2bdq_A Copper homeostasis prot 20.3 6.2E+02 0.021 24.8 12.0 79 74-163 70-153 (224)
393 1ypf_A GMP reductase; GUAC, pu 20.1 1.2E+02 0.0042 31.4 5.8 65 85-163 161-239 (336)
No 1
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=1.8e-69 Score=617.08 Aligned_cols=348 Identities=20% Similarity=0.318 Sum_probs=298.6
Q ss_pred HHHHHHhhCceEEEecccccccccccCCCCcCcCCCcccchhhcccChHHHHHHHHHHHHHhcchhhcccccCChhchHh
Q psy13907 267 KINEFILENKLYLIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQ 346 (698)
Q Consensus 267 ~~~~~~~~~~~~i~dG~~gt~l~~~~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~ 346 (698)
.+.+.+ +++++|+||||||+|+++ |++ .++ ++|++++||+|+++|++|++||||||+||||++|+.+|++
T Consensus 6 ~l~~~l-~~~ililDGamGT~L~~~-g~~-----~~~---el~~l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~ 75 (566)
T 1q7z_A 6 EVSKLL-SERVLLLDGAYGTEFMKY-GYD-----DLP---EELNIKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLRK 75 (566)
T ss_dssp HHHHHH-HHCCEECCCCSHHHHHHT-TCC-----SCG---GGHHHHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHGG
T ss_pred HHHHHH-cCCeEEEEChHHHHHHHC-CCC-----CCc---hhhcccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHHh
Confidence 456654 678999999999999998 887 232 4557999999999999999999999999999999999998
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy13907 347 HLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIE 426 (698)
Q Consensus 347 ~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~ 426 (698)
+ |+ ++++++||++|++|||+|+++ + ||||||||+|+++.+ .+++++++++++|++|++
T Consensus 76 ~-g~-~~~~~el~~~av~lAr~a~~~-----------~-~VAGsiGP~g~~~~~--------~~~~~~~e~~~~~~~qi~ 133 (566)
T 1q7z_A 76 H-GL-EDKLDPIVRNAVRIARRAAGE-----------K-LVFGDIGPTGELPYP--------LGSTLFEEFYENFRETVE 133 (566)
T ss_dssp G-TC-GGGHHHHHHHHHHHHHHHHTT-----------S-EEEEEECCCSCCBTT--------TSSBCHHHHHHHHHHHHH
T ss_pred c-Cc-hHHHHHHHHHHHHHHHHHHhC-----------C-eEEEeCCCcccCCCC--------CCCCCHHHHHHHHHHHHH
Confidence 6 99 799999999999999999853 3 999999999987632 357899999999999999
Q ss_pred HHHhCCCCEEEecccCCHHHHHHHHHHHHhc-CCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC-CC
Q psy13907 427 ALIQGGIDLLAIETLPAQEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC-LA 504 (698)
Q Consensus 427 ~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~-~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC-~~ 504 (698)
+|+++|||+|++||++++.|+++++.++++. .++|+|+|||+.++|++++|+++.+++..+.. .++++||+|| +|
T Consensus 134 ~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~---~~~~avG~NC~~g 210 (566)
T 1q7z_A 134 IMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDE---LDIDALGINCSLG 210 (566)
T ss_dssp HHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHT---SSCSEEEEESSSC
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhc---cCCCEEEEeCCCC
Confidence 9999999999999999999999999999974 68999999999999999999999999998854 5789999999 79
Q ss_pred hhhhHHHHHHhc--CCCCEEEecCCCCCc--CCCCcccccCCChhhHHHHHHHHHHcCCeEEeecCCCchHHHHHHHhcc
Q psy13907 505 PHYVESLLTSAG--RDVPLLCCPNSGETF--DPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGGCCRTNADDMKNVNQVP 580 (698)
Q Consensus 505 p~~~~~~l~~l~--~~~pl~~yPNaG~~~--d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiGGCCGTtP~hI~al~~~v 580 (698)
|++|.++|+.++ ++.|+++|||+|+|+ +. .+.| +.+|++|++++++|++.|++||||||||||+||++|++++
T Consensus 211 p~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~-~~~~--~~~p~~~a~~~~~~~~~G~~iiGGCCGTtP~hI~aia~~~ 287 (566)
T 1q7z_A 211 PEEILPIFQELSQYTDKFLVVEPNAGKPIVENG-KTVY--PLKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVKLFRKVL 287 (566)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEECCSSSCEEETT-EEEC--CCCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCC-cccc--CCCHHHHHHHHHHHHHcCCcEEccccCCCHHHHHHHHHHh
Confidence 999999999997 789999999999986 32 2335 7899999999999999999999999999999999999999
Q ss_pred ccCCCCCcccccccccCCCCceeeeeeccccccccccCCcccEEE-EeecCCchhhhhhhhhcccccccccchhhhhhhh
Q psy13907 581 VKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVI-EQTELPIKSVELQLVRVETCGCAEGYSRDATEIQ 659 (698)
Q Consensus 581 ~~~~~~~~~~~~~~e~~~~~~~~lsG~~~~~~~~~~~p~~~~~~v-Er~nv~~~s~~~~Lir~e~~~~~~~~~~~~~~iq 659 (698)
++.+|+.++.. .+..+.||+ +.+.. ..+++| ||.|++++..|...++..+...+...|++..+ +
T Consensus 288 ~~~~p~~~~~~-------~~~~~~s~~----~~~~~---~~~~iiGer~N~Tg~dsf~~~~~~~~~~~a~~~A~~~v~-~ 352 (566)
T 1q7z_A 288 GNRKPLQRKKK-------RIFAVSSPS----KLVTF---DHFVVIGERINPAGRKKLWAEMQKGNEEIVIKEAKTQVE-K 352 (566)
T ss_dssp CSCCCCCCCCC-------CCCEEECSS----CEEES---SSCEEEEEEECCTTCHHHHHHHHTTCCHHHHHHHHHHHH-T
T ss_pred cCCCCCCcccC-------ccceecCCc----eeecc---ccceEEEEEecCCCChhHHHHhhcCCHHHHHHHHHHHHH-C
Confidence 99998864431 234677887 55544 557888 99999998888888887766666665544443 3
Q ss_pred hhhhcccc
Q psy13907 660 NIQIGEGN 667 (698)
Q Consensus 660 ~~qi~~g~ 667 (698)
..+|.|-+
T Consensus 353 GAdiIDIg 360 (566)
T 1q7z_A 353 GAEVLDVN 360 (566)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEC
Confidence 44454444
No 2
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=9.3e-67 Score=570.72 Aligned_cols=306 Identities=20% Similarity=0.274 Sum_probs=256.2
Q ss_pred HHHHHHhhCceEEEecccccccccccCCCCcCcCCCcccchhhcccChHHHHHHHHHHHHHhcchhhcccccCChhchHh
Q psy13907 267 KINEFILENKLYLIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQ 346 (698)
Q Consensus 267 ~~~~~~~~~~~~i~dG~~gt~l~~~~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~ 346 (698)
.+.+.+.+++++|+||||||+|+++ |++ . .++|+..+++++||+|++||++|++||||||+||||++|+.+|++
T Consensus 12 ~l~~~L~~~~ilIlDGgmGT~L~~~-G~~---~--~~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~ 85 (406)
T 1lt8_A 12 GILERLNAGEIVIGDGGFVFALEKR-GYV---K--AGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLEN 85 (406)
T ss_dssp CHHHHHHTTCCEECCCCHHHHHHHH-TSS---C--TTTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC---
T ss_pred HHHHHHhcCCEEEEeCccchHHHHC-CCC---C--CcccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHh
Confidence 3566554445999999999999999 987 2 358999999999999999999999999999999999999999998
Q ss_pred hcCCC---HHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q psy13907 347 HLGLS---EDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRP 423 (698)
Q Consensus 347 ~~g~~---~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~ 423 (698)
+ |++ ++++++||++|++|||+|++++ ++||||||||+|+++ +.+++++++++|++
T Consensus 86 ~-G~~~~~~~~~~eln~~Av~LAreAa~~~----------~~~VAGsIGP~g~~l-----------~~~s~eel~~~~~e 143 (406)
T 1lt8_A 86 R-GNYVLEKISGQEVNEAAADIARQVADEG----------DALVAGGVSQTPSYL-----------SAKSETEVKKVFLQ 143 (406)
T ss_dssp -----------CHHHHHHHHHHHHHHHTTT----------TCEEEEEECCCHHHH-----------TTCHHHHHHHHHHH
T ss_pred c-CCccchhHHHHHHHHHHHHHHHHHHhcC----------CCEEEEEcCCccccc-----------CCCCHHHHHHHHHH
Confidence 6 874 3578999999999999999752 589999999998643 35899999999999
Q ss_pred HHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC-
Q psy13907 424 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC- 502 (698)
Q Consensus 424 qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC- 502 (698)
|+++|+++|||+|++|||+|+.|+++++.++++ .++||||||||.++|+ ++|+++.+++..+.. .++++||+||
T Consensus 144 qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~-~~lPv~iS~T~~~~G~-l~G~~~~~~~~~l~~---~~~~avGvNC~ 218 (406)
T 1lt8_A 144 QLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIA-SGKPVAATMAIGPEGD-LHGVPPGEAAVRLVK---AGASIIGVNCH 218 (406)
T ss_dssp HHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGG-GTSCEEEEECCBTTBC-TTCCCHHHHHHHHHT---TTCSEEEEESS
T ss_pred HHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHH-hCCcEEEEEEECCCCC-cCCCcHHHHHHHhhc---CCCCEEEecCC
Confidence 999999999999999999999999999999997 4799999999998899 999999999998854 4689999999
Q ss_pred CChhhhHHHHHHhc--C-----CCCEEEecCCCCCcCCCCcccc------cCCChh-----hHHHHHHHHHHcCCeEEee
Q psy13907 503 LAPHYVESLLTSAG--R-----DVPLLCCPNSGETFDPGQRIWM------NKDSVP-----SVDTYVPRWLDTGVKYVGG 564 (698)
Q Consensus 503 ~~p~~~~~~l~~l~--~-----~~pl~~yPNaG~~~d~~~g~~~------~~~~p~-----~~a~~~~~~~~~G~~iiGG 564 (698)
++|+.|.++++.++ . +.|+++|||+|..++.....|. ++.+|. ++++++++|.+.|++||||
T Consensus 219 ~gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~~Ga~iIGG 298 (406)
T 1lt8_A 219 FDPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGG 298 (406)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTEEEECC
T ss_pred CCHHHHHHHHHHHHHhhhhcCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 69999999999987 2 7899999999875553333453 355565 4899999999999999999
Q ss_pred cCCCchHHHHHHHhccccCCCCCcccccccccCCCCceeeeeecccccccc
Q psy13907 565 CCRTNADDMKNVNQVPVKFSITPESLTNARDKFNIPRFRISGHLDSTECSV 615 (698)
Q Consensus 565 CCGTtP~hI~al~~~v~~~~~~~~~~~~~~e~~~~~~~~lsG~~~~~~~~~ 615 (698)
||||||+||++|++++++.+++.+|.. .....++||| +.+.
T Consensus 299 CCGTtPeHI~aia~~l~~~~~~~~~~~------~~~~~~~sGL----e~l~ 339 (406)
T 1lt8_A 299 CCGFEPYHIRAIAEELAPERGFLPPAS------EKHGSWGSGL----DMHT 339 (406)
T ss_dssp CTTCCHHHHHHHHHHTHHHHSCCCGGG------GGSCSTTGGG----GGCS
T ss_pred ecCCCHHHHHHHHHHHhccCCCCCCCc------cCCCCCCccc----cccC
Confidence 999999999999999998776544432 1346789999 6653
No 3
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=1.3e-36 Score=346.54 Aligned_cols=256 Identities=20% Similarity=0.255 Sum_probs=208.3
Q ss_pred CCHhhHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhhccCCccCCCCeEEEEecCCcCCCCCCCCCccCCCCCCCCHHHHH
Q psy13907 1 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIVLEEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELI 80 (698)
Q Consensus 1 ~s~~~l~~~~gl~~~~~~eln~~Av~lAreA~~~~~~~~~~~~~~~v~VAGSIGP~g~~l~~gseY~g~y~~~~s~eel~ 80 (698)
+|..+|.+ +|++ +++++||++|++|||+|+++ + +|||||||+|+++. .|+ ++++++++
T Consensus 68 a~~~~l~~-~g~~-~~~~el~~~av~lAr~a~~~-----------~-~VAGsiGP~g~~~~-------~~~-~~~~~e~~ 125 (566)
T 1q7z_A 68 ATRMKLRK-HGLE-DKLDPIVRNAVRIARRAAGE-----------K-LVFGDIGPTGELPY-------PLG-STLFEEFY 125 (566)
T ss_dssp CSHHHHGG-GTCG-GGHHHHHHHHHHHHHHHHTT-----------S-EEEEEECCCSCCBT-------TTS-SBCHHHHH
T ss_pred CCHHHHHh-cCch-HHHHHHHHHHHHHHHHHHhC-----------C-eEEEeCCCcccCCC-------CCC-CCCHHHHH
Confidence 46788987 7997 89999999999999999852 4 99999999999652 232 58999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhc-CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceE
Q psy13907 81 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVA 159 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~-~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~a 159 (698)
++|++|+++|+++|||+|++|||+++.|++++++++++. +++|+|+||||+++|++++|+++++++..+. ..++++
T Consensus 126 ~~~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~---~~~~~a 202 (566)
T 1q7z_A 126 ENFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFD---ELDIDA 202 (566)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHH---TSSCSE
T ss_pred HHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhh---ccCCCE
Confidence 999999999999999999999999999999999999974 7899999999999999999999999999885 367999
Q ss_pred EEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCccEEeecCCCCceeec
Q psy13907 160 VGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYH 239 (698)
Q Consensus 160 IGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~pnag~p~~~~ 239 (698)
||+||+. ||++|.++++++... + +.|+++|||||+|+..+
T Consensus 203 vG~NC~~-----------------------------gp~~~~~~l~~l~~~------~-----~~p~~vyPNaG~p~~~~ 242 (566)
T 1q7z_A 203 LGINCSL-----------------------------GPEEILPIFQELSQY------T-----DKFLVVEPNAGKPIVEN 242 (566)
T ss_dssp EEEESSS-----------------------------CHHHHHHHHHHHHHT------C-----CSEEEEECCSSSCEEET
T ss_pred EEEeCCC-----------------------------CHHHHHHHHHHHHhc------C-----CCEEEEEcCCCCCcccC
Confidence 9999999 999999999999876 5 79999999999998888
Q ss_pred CeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCceEEEeccccccccccc-------CCCCcCcCCCc-cc------
Q psy13907 240 GVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKLYLIDGGFSSQLSKHV-------GEDNVTEKDNP-LW------ 305 (698)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~i~dG~~gt~l~~~~-------g~~~~~~~~~~-lw------ 305 (698)
++.. |+++|+. |.+.+. ++ .+.++.|++|||||+++.-. +.........+ .+
T Consensus 243 ~~~~---~~~~p~~-------~a~~~~---~~-~~~G~~iiGGCCGTtP~hI~aia~~~~~~~p~~~~~~~~~~~~s~~~ 308 (566)
T 1q7z_A 243 GKTV---YPLKPHD-------FAVHID---SY-YELGVNIFGGCCGTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSPSK 308 (566)
T ss_dssp TEEE---CCCCHHH-------HHTTHH---HH-HHTTCSEECCCTTCCHHHHHHHHHHHCSCCCCCCCCCCCCEEECSSC
T ss_pred Cccc---cCCCHHH-------HHHHHH---HH-HHcCCcEEccccCCCHHHHHHHHHHhcCCCCCCcccCccceecCCce
Confidence 8764 8866654 444443 33 45569999999999986521 11110000001 11
Q ss_pred ----------chhhccc------------ChHHHHHHHHHHHHHhcchhhcc
Q psy13907 306 ----------CSAFLHS------------NRQAVIDTHRDYVRAGCDIVTTN 335 (698)
Q Consensus 306 ----------s~~~~l~------------~Pe~V~~iH~~yl~AGAdII~TN 335 (698)
.+.+|.| ++|.+.+.-++.+++|||||--|
T Consensus 309 ~~~~~~~~iiGer~N~Tg~dsf~~~~~~~~~~~a~~~A~~~v~~GAdiIDIg 360 (566)
T 1q7z_A 309 LVTFDHFVVIGERINPAGRKKLWAEMQKGNEEIVIKEAKTQVEKGAEVLDVN 360 (566)
T ss_dssp EEESSSCEEEEEEECCTTCHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEE
T ss_pred eeccccceEEEEEecCCCChhHHHHhhcCCHHHHHHHHHHHHHCCCCEEEEC
Confidence 1236666 45566666788999999999999
No 4
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=3.3e-33 Score=305.71 Aligned_cols=223 Identities=17% Similarity=0.157 Sum_probs=165.7
Q ss_pred CCHhhHHHhcCCCH---HHHHHHHHHHHHHHHHHHHhhhccCCccCCCCeEEEEecCCcCCCCCCCCCccCCCCCCCCHH
Q psy13907 1 ASVEGFVQHLGLSE---DQSVQLIRDAVKYVKEAIVLEEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQ 77 (698)
Q Consensus 1 ~s~~~l~~~~gl~~---~~~~eln~~Av~lAreA~~~~~~~~~~~~~~~v~VAGSIGP~g~~l~~gseY~g~y~~~~s~e 77 (698)
+|..+|.+ +|+++ +++++||++||+|||+|+++ .+++|||||||+|+++ ..++++
T Consensus 78 A~~~~l~~-~G~~~~~~~~~~eln~~Av~LAreAa~~----------~~~~VAGsIGP~g~~l-----------~~~s~e 135 (406)
T 1lt8_A 78 ASEDKLEN-RGNYVLEKISGQEVNEAAADIARQVADE----------GDALVAGGVSQTPSYL-----------SAKSET 135 (406)
T ss_dssp CSSCC--------------CHHHHHHHHHHHHHHHTT----------TTCEEEEEECCCHHHH-----------TTCHHH
T ss_pred cCHHHHHh-cCCccchhHHHHHHHHHHHHHHHHHHhc----------CCCEEEEEcCCccccc-----------CCCCHH
Confidence 35667777 68742 56889999999999999863 2589999999999855 147899
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCc
Q psy13907 78 ELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQL 157 (698)
Q Consensus 78 el~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~ 157 (698)
+++++|++|+++|+++|||+|+||||+++.|++++++++++ .++|||+||||.++|+ ++|+++++++..+. ..++
T Consensus 136 el~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~-~~lPv~iS~T~~~~G~-l~G~~~~~~~~~l~---~~~~ 210 (406)
T 1lt8_A 136 EVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIA-SGKPVAATMAIGPEGD-LHGVPPGEAAVRLV---KAGA 210 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGG-GTSCEEEEECCBTTBC-TTCCCHHHHHHHHH---TTTC
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHH-hCCcEEEEEEECCCCC-cCCCcHHHHHHHhh---cCCC
Confidence 99999999999999999999999999999999999999998 5799999999999999 99999999999885 3579
Q ss_pred eEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCccEEeecCCCC-ce
Q psy13907 158 VAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSL-FE 236 (698)
Q Consensus 158 ~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~pnag~-p~ 236 (698)
++||+||+. ||++|.+++++|.+.- ...|. +.||++|||||. |.
T Consensus 211 ~avGvNC~~-----------------------------gP~~~~~~l~~l~~~~-~~~g~-----~~pl~vyPNag~~~~ 255 (406)
T 1lt8_A 211 SIIGVNCHF-----------------------------DPTISLKTVKLMKEGL-EAAQL-----KAHLMSQPLAYHTPD 255 (406)
T ss_dssp SEEEEESSS-----------------------------CHHHHHHHHHHHHHHH-HTTTC-----CCEEEEECCSBCCTT
T ss_pred CEEEecCCC-----------------------------CHHHHHHHHHHHHHhh-hhcCC-----CccEEEecCCCCCCc
Confidence 999999998 9999999999988640 01123 689999999953 43
Q ss_pred eecCeeee---eeeccchhhhccccchhhhhHHHHHHHHhhCceEEEecccccccccc
Q psy13907 237 TYHGVFVN---VQYNLKCELKRSHFNILSKDLQKINEFILENKLYLIDGGFSSQLSKH 291 (698)
Q Consensus 237 ~~~~~~~~---~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~i~dG~~gt~l~~~ 291 (698)
.....+.. ..|.++++++... -|.+... ...+.++.|++|||||+++..
T Consensus 256 ~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~a~----~w~~~Ga~iIGGCCGTtPeHI 307 (406)
T 1lt8_A 256 ANKQGFIDLPEFPFGLEPRVATRW--DIQKYAR----EAYNLGVRYIGGCCGFEPYHI 307 (406)
T ss_dssp CCTTCGGGSTTTTTSCGGGBCCHH--HHHHHHH----HHHHHTEEEECCCTTCCHHHH
T ss_pred CCcccccCCccccccCCHHHHHHH--HHHHHHH----HHHhCCCeEEEEecCCCHHHH
Confidence 21111110 0245555543321 0322221 235678999999999976553
No 5
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=99.40 E-value=2.5e-14 Score=152.75 Aligned_cols=96 Identities=20% Similarity=0.347 Sum_probs=93.3
Q ss_pred eeeeeeccccccccccCCcccEEEEeecCCchhhhhhhhhcccccccccchhhhhhhhhhhhccccccCCCCcchhhhcc
Q psy13907 602 FRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFP 681 (698)
Q Consensus 602 ~~lsG~~~~~~~~~~~p~~~~~~vEr~nv~~~s~~~~Lir~e~~~~~~~~~~~~~~iq~~qi~~g~~~~~~~~p~~~~~p 681 (698)
+.++|.+|++.+..-++++|.+.++.+++++++++++|+|+|+|+++.++.+|.++||++||.||++|||..|||+|.||
T Consensus 176 l~Ie~~~~ks~y~lgd~I~G~I~f~~s~i~Ik~iel~LiR~Et~~~~~~~~~e~~~i~k~eImdG~p~rge~IPirl~Lp 255 (340)
T 2r51_A 176 LHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIPIRLFLA 255 (340)
T ss_dssp EEEEEEESCSEEETTCEEEEEEEEEEECSCEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEESCCCTTCEEEEEEEGG
T ss_pred EEEEEEECcccccCCCeEEEEEEEEEeeceeEEEEEEEEEEEEEecCCCeeEEEEEEEEEEEecCCccCCCEEEEEEECC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc--cccceee
Q psy13907 682 RLFTCPTLI--TSNFKIV 697 (698)
Q Consensus 682 ~~~~~~~~~--~~~~~~~ 697 (698)
++++|||+. ++.|||-
T Consensus 256 ~~~l~PT~~~~~~~fsV~ 273 (340)
T 2r51_A 256 GYELTPTMRDINKKFSVR 273 (340)
T ss_dssp GSCCCCCEEEETTTEEEE
T ss_pred CCCCCCCccccCCeEEEE
Confidence 999999999 9999984
No 6
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=99.35 E-value=7.2e-14 Score=149.05 Aligned_cols=96 Identities=21% Similarity=0.357 Sum_probs=83.9
Q ss_pred eeeeeeccccccccccCCcccEEEEeecCCchhhhhhhhhcccccccccchhhhhhhhhhhhccccccCCCCcchhhhcc
Q psy13907 602 FRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFP 681 (698)
Q Consensus 602 ~~lsG~~~~~~~~~~~p~~~~~~vEr~nv~~~s~~~~Lir~e~~~~~~~~~~~~~~iq~~qi~~g~~~~~~~~p~~~~~p 681 (698)
+.+...++++.+...+++.|.+.++.+++++++++++|+|+|+|+|+.++.+|.++||++||.||++|||..|||+|.||
T Consensus 176 L~ieF~~~ks~y~l~d~I~G~I~f~~s~i~Ik~iel~LiR~Et~~~~~~~~~e~~~i~k~eImDG~p~rge~IPirl~Lp 255 (341)
T 2fau_A 176 LHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLA 255 (341)
T ss_dssp EEEEEEESCSEEETTCEEEEEEEEEEECSCEEEEEEEEEEEEEESCGGGCEEEEEEEEEEECCCC------CEEEEEEST
T ss_pred EEEEEEEccccccCCCeEEEEEEEEEeccceEEEEEEEEEEEEEcCCCCeeeEEEEEEEEEEeCCCccCCCEEEEEEEcC
Confidence 34555677778888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc--cccceee
Q psy13907 682 RLFTCPTLI--TSNFKIV 697 (698)
Q Consensus 682 ~~~~~~~~~--~~~~~~~ 697 (698)
+|++|||+. ++.|||-
T Consensus 256 ~~~l~PT~~~~~~~fsV~ 273 (341)
T 2fau_A 256 GYDPTPTMRDVNKKFSVR 273 (341)
T ss_dssp TTCCCCCEEEEETTEEEE
T ss_pred CCCCCCcchhcCCeEEEE
Confidence 999999999 9999984
No 7
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=94.24 E-value=0.77 Score=47.97 Aligned_cols=183 Identities=18% Similarity=0.084 Sum_probs=109.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++... +.+..+
T Consensus 33 ~iD~~----~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~st~~ 99 (304)
T 3cpr_A 33 DIDIA----AGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG---------TNNTRT 99 (304)
T ss_dssp CBCHH----HHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC---------CSCHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC---------CCCHHH
Confidence 45554 4566778888899999876 532 3677877777777653 3589987662 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-. + .+..++.+..+.++++++ + +.
T Consensus 100 ai~la~~A~~~Gadavlv~~P~--y-----------------------~~~~~~~l~~~f~~ia~a------~-----~l 143 (304)
T 3cpr_A 100 SVELAEAAASAGADGLLVVTPY--Y-----------------------SKPSQEGLLAHFGAIAAA------T-----EV 143 (304)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC--S-----------------------SCCCHHHHHHHHHHHHHH------C-----CS
T ss_pred HHHHHHHHHhcCCCEEEECCCC--C-----------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 7765543344789998886532 0 112568889999999887 5 78
Q ss_pred cEEeecCC---CCc---eee-----cCeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCceEEEecccccccccc-c
Q psy13907 225 PLKAKPNR---SLF---ETY-----HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKLYLIDGGFSSQLSKH-V 292 (698)
Q Consensus 225 ~~~~~pna---g~p---~~~-----~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~i~dG~~gt~l~~~-~ 292 (698)
||.+|-+- |.. +.. +++.+.|.+. ++ ++..+.+.+...+..|+.|.-...+... .
T Consensus 144 PiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds--------sg-----d~~~~~~~~~~~~f~v~~G~d~~~l~~l~~ 210 (304)
T 3cpr_A 144 PICLYDIPGRSGIPIESDTMRRLSELPTILAVXDA--------KG-----DLVAATSLIKETGLAWYSGDDPLNLVWLAL 210 (304)
T ss_dssp CEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEEC--------SC-----CHHHHHHHHHHHCCEEEECSGGGHHHHHHT
T ss_pred CEEEEeCccccCcCCCHHHHHHHHcCCCEEEEecC--------CC-----CHHHHHHHHHhcCEEEEECcHHHHHHHHHC
Confidence 89888763 321 110 1223333332 11 1222222211116777777655544433 0
Q ss_pred CCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 293 GEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 293 g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
|. +-.+|...|+ .|+.+.++++.|.
T Consensus 211 G~-------~G~is~~an~-~P~~~~~l~~a~~ 235 (304)
T 3cpr_A 211 GG-------SGFISVIGHA-APTALRELYTSFE 235 (304)
T ss_dssp TC-------CEEEESGGGT-CHHHHHHHHHHHH
T ss_pred CC-------CEEEecHHHh-hHHHHHHHHHHHH
Confidence 22 2244667777 8999999998876
No 8
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=93.91 E-value=0.76 Score=47.95 Aligned_cols=184 Identities=11% Similarity=0.017 Sum_probs=109.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++... +.+..+
T Consensus 29 ~iD~~----~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg---------~~~t~~ 95 (301)
T 1xky_A 29 NIDFA----KTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG---------SNNTHA 95 (301)
T ss_dssp SBCHH----HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSCHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC---------CCCHHH
Confidence 45554 4566778888899999876 432 3667877777777654 3589997662 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-.+ .+..++.+....++++++ + +.
T Consensus 96 ai~la~~A~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~va~a------~-----~l 139 (301)
T 1xky_A 96 SIDLTKKATEVGVDAVMLVAPYY-------------------------NKPSQEGMYQHFKAIAES------T-----PL 139 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHHT------C-----SS
T ss_pred HHHHHHHHHhcCCCEEEEcCCCC-------------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 77655433447899988876431 112668899999999887 5 78
Q ss_pred cEEeecCCC---Cc---eee-----cCeeeeeeeccchhhhccccchhhhhHHHHHHHH--hhCceEEEecccccccccc
Q psy13907 225 PLKAKPNRS---LF---ETY-----HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFI--LENKLYLIDGGFSSQLSKH 291 (698)
Q Consensus 225 ~~~~~pnag---~p---~~~-----~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~--~~~~~~i~dG~~gt~l~~~ 291 (698)
||.+|-+-+ .. +.. +++.+.|.+. ++ ++..+.+.+ ...+..|+.|.-...+...
T Consensus 140 PiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds--------sg-----d~~~~~~~~~~~~~~f~v~~G~d~~~l~~l 206 (301)
T 1xky_A 140 PVMLYNVPGRSIVQISVDTVVRLSEIENIVAIKDA--------GG-----DVLTMTEIIEKTADDFAVYSGDDGLTLPAM 206 (301)
T ss_dssp CEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEEC--------SS-----CHHHHHHHHHHSCTTCEEEESSGGGHHHHH
T ss_pred CEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEcC--------CC-----CHHHHHHHHHhcCCCeEEEECcHHHHHHHH
Confidence 898887633 21 110 1222222221 11 122222322 2345777777655544433
Q ss_pred cCCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 292 VGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 292 ~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
-.- +.-.+|...|+ .|+.+.++++.|.
T Consensus 207 -~~G-----~~G~is~~an~-~P~~~~~l~~a~~ 233 (301)
T 1xky_A 207 -AVG-----AKGIVSVASHV-IGNEMQEMIAAFQ 233 (301)
T ss_dssp -HTT-----CCEEEESTHHH-HHHHHHHHHHHHH
T ss_pred -HcC-----CCEEEcCHHHh-CHHHHHHHHHHHH
Confidence 111 12245666666 7888888888775
No 9
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=93.61 E-value=0.65 Score=48.21 Aligned_cols=111 Identities=12% Similarity=-0.070 Sum_probs=76.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..+|+++... +.+..+
T Consensus 17 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 83 (292)
T 2vc6_A 17 RIDEV----ALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG---------SNSTAE 83 (292)
T ss_dssp EECHH----HHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CccHHH
Confidence 35554 4556778888899999875 432 3677877777777654 3589987662 335667
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+..-.+ .+..++.+..+.++++++ + +.
T Consensus 84 ai~la~~A~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~ia~a------~-----~l 127 (292)
T 2vc6_A 84 AIAFVRHAQNAGADGVLIVSPYY-------------------------NKPTQEGIYQHFKAIDAA------S-----TI 127 (292)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHHH------C-----SS
T ss_pred HHHHHHHHHHcCCCEEEEcCCCC-------------------------CCCCHHHHHHHHHHHHHh------C-----CC
Confidence 77655433447899999887431 112668888999999887 5 78
Q ss_pred cEEeecCC
Q psy13907 225 PLKAKPNR 232 (698)
Q Consensus 225 ~~~~~pna 232 (698)
||.+|-+-
T Consensus 128 PiilYn~P 135 (292)
T 2vc6_A 128 PIIVYNIP 135 (292)
T ss_dssp CEEEEECH
T ss_pred CEEEEeCc
Confidence 88888763
No 10
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=93.51 E-value=1.4 Score=45.60 Aligned_cols=182 Identities=13% Similarity=0.066 Sum_probs=110.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 146 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~ 146 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+..+- +++.. .+.+..+++
T Consensus 16 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGv---------g~~~t~~ai 81 (293)
T 1w3i_A 16 RIDKE----KLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQV---------GGLNLDDAI 81 (293)
T ss_dssp SBCHH----HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEEC---------CCSCHHHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEec---------CCCCHHHHH
Confidence 45554 4556777888899998776 422 3677888888888875333 55433 234677888
Q ss_pred HHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccC-CChHHHHHHHHHHHHcCCCCCCCcCCCcCcc
Q psy13907 147 RDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLIS-RKPIQLLSIELELAAAGKMPSGTTQIPFEAP 225 (698)
Q Consensus 147 ~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~-~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 225 (698)
+..+.....|+|++.+-.-. + .+ ..++.+..+.++++++ + +.|
T Consensus 82 ~la~~A~~~Gadavlv~~P~--y-----------------------~~~~s~~~l~~~f~~va~a------~-----~lP 125 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPY--Y-----------------------YPRMSEKHLVKYFKTLCEV------S-----PHP 125 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCC--S-----------------------CSSCCHHHHHHHHHHHHHH------C-----SSC
T ss_pred HHHHHHHhcCCCEEEEcCCC--C-----------------------CCCCCHHHHHHHHHHHHhh------C-----CCC
Confidence 76654456789998887533 0 11 2678899999999987 5 789
Q ss_pred EEeecCC---CCc---eee--cCeeeeeeeccchhhhccccchhhhhHHHHHHHH-hhCceEEEecccccccccc-cCCC
Q psy13907 226 LKAKPNR---SLF---ETY--HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFI-LENKLYLIDGGFSSQLSKH-VGED 295 (698)
Q Consensus 226 ~~~~pna---g~p---~~~--~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-~~~~~~i~dG~~gt~l~~~-~g~~ 295 (698)
|.+|-+- |.. +.. +++.+.|.+. ++ ++..+.+.+ ...+..|+.|.=...+... .|.+
T Consensus 126 iilYn~P~~tg~~l~~~~~~~~pnIvgiKds--------~g-----d~~~~~~~~~~~~~f~v~~G~d~~~~~~l~~G~~ 192 (293)
T 1w3i_A 126 VYLYNYPTATGKDIDAKVAKEIGCFTGVKDT--------IE-----NIIHTLDYKRLNPNMLVYSGSDMLIATVASTGLD 192 (293)
T ss_dssp EEEEECHHHHSCCCCHHHHHHHCCEEEEEEC--------CS-----CHHHHHHHHHHCTTSEEEECCSTTHHHHHHTTCC
T ss_pred EEEEECchhhCcCCCHHHHHhcCCEEEEEeC--------CC-----CHHHHHHHHhcCCCEEEEEccHHHHHHHHHcCCC
Confidence 9998763 321 111 2334433332 11 122222221 2446777777554444332 0222
Q ss_pred CcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 296 NVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 296 ~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
-.++...|+ .|+.+.++++.|.
T Consensus 193 -------G~is~~an~-~P~~~~~l~~a~~ 214 (293)
T 1w3i_A 193 -------GNVAAGSNY-LPEVTVTIKKLAM 214 (293)
T ss_dssp -------EEECGGGGT-CHHHHHHHHHHHH
T ss_pred -------EEEeCHHHh-CHHHHHHHHHHHH
Confidence 245667777 8999999988875
No 11
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=93.48 E-value=1.3 Score=46.04 Aligned_cols=183 Identities=15% Similarity=0.052 Sum_probs=107.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+|+++... +.+..+
T Consensus 17 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 83 (294)
T 2ehh_A 17 EVDYE----ALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG---------GNATHE 83 (294)
T ss_dssp EECHH----HHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSCHHH
T ss_pred CcCHH----HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 35554 5566788888899999876 432 3677877777777653 3589987662 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-.+ .+..++.+..+.++++++ + +.
T Consensus 84 ai~la~~A~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~va~a------~-----~l 127 (294)
T 2ehh_A 84 AVHLTAHAKEVGADGALVVVPYY-------------------------NKPTQRGLYEHFKTVAQE------V-----DI 127 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHHH------C-----CS
T ss_pred HHHHHHHHHhcCCCEEEECCCCC-------------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 77655433347899988875331 112668888999999887 5 78
Q ss_pred cEEeecCCC---Cc---ee------ecCeeeeeeeccchhhhccccchhhhhHHHHHHHH--hhCceEEEeccccccccc
Q psy13907 225 PLKAKPNRS---LF---ET------YHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFI--LENKLYLIDGGFSSQLSK 290 (698)
Q Consensus 225 ~~~~~pnag---~p---~~------~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~--~~~~~~i~dG~~gt~l~~ 290 (698)
||.+|-+-+ .. +. .+++.+.|.+. ++ ++..+.+.+ ...+..|+.|.=...+..
T Consensus 128 PiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKds--------~g-----d~~~~~~~~~~~~~~f~v~~G~d~~~~~~ 194 (294)
T 2ehh_A 128 PIIIYNIPSRTCVEISVDTMFKLASECENIVASKES--------TP-----NMDRISEIVKRLGESFSVLSGDDSLTLPM 194 (294)
T ss_dssp CEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEEC--------CS-----CHHHHHHHHHHHCTTSEEEESSGGGHHHH
T ss_pred CEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEEEeC--------CC-----CHHHHHHHHHhcCCCeEEEECcHHHHHHH
Confidence 888887632 21 10 11223322221 11 122222221 234677777765544433
Q ss_pred c-cCCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 291 H-VGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 291 ~-~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
. .|.+ -.+|...|+ .|+.+.++++.|.
T Consensus 195 l~~G~~-------G~is~~an~-~P~~~~~l~~a~~ 222 (294)
T 2ehh_A 195 MALGAK-------GVISVANNV-MPREVKELIRAAL 222 (294)
T ss_dssp HHTTCC-------EEEESGGGT-CHHHHHHHHHHHH
T ss_pred HHCCCC-------EEEeCHHHh-hHHHHHHHHHHHH
Confidence 2 0222 244566666 6888888888775
No 12
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=93.48 E-value=1.1 Score=46.42 Aligned_cols=111 Identities=12% Similarity=-0.057 Sum_probs=74.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+|+++... +.+..+
T Consensus 17 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 83 (289)
T 2yxg_A 17 EVDFD----GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG---------SNCTEE 83 (289)
T ss_dssp EECHH----HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CCCHHH
Confidence 45554 4566778888899999876 433 3677877777777653 3589987662 335667
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-.+ .+...+.+..+.++++++ + +.
T Consensus 84 ai~la~~a~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~ia~a------~-----~l 127 (289)
T 2yxg_A 84 AIELSVFAEDVGADAVLSITPYY-------------------------NKPTQEGLRKHFGKVAES------I-----NL 127 (289)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHHH------C-----SS
T ss_pred HHHHHHHHHhcCCCEEEECCCCC-------------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 76654433346899988876331 112667888999999887 5 78
Q ss_pred cEEeecCC
Q psy13907 225 PLKAKPNR 232 (698)
Q Consensus 225 ~~~~~pna 232 (698)
||.+|-+-
T Consensus 128 PiilYn~P 135 (289)
T 2yxg_A 128 PIVLYNVP 135 (289)
T ss_dssp CEEEEECH
T ss_pred CEEEEeCc
Confidence 88888763
No 13
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=93.45 E-value=0.74 Score=49.00 Aligned_cols=185 Identities=12% Similarity=0.041 Sum_probs=108.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..+||++... +.+..+
T Consensus 48 ~ID~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------~~st~e 114 (343)
T 2v9d_A 48 QLDKP----GTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG---------GTNARE 114 (343)
T ss_dssp SBCHH----HHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------SSCHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 45654 4556778888899999876 532 3677877777777654 3589997662 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-.+ .+..++.+..+.++++++ + +.
T Consensus 115 ai~la~~A~~~Gadavlv~~P~Y-------------------------~~~s~~~l~~~f~~VA~a------~-----~l 158 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVINPYY-------------------------WKVSEANLIRYFEQVADS------V-----TL 158 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSS-------------------------SCCCHHHHHHHHHHHHHT------C-----SS
T ss_pred HHHHHHHHHhcCCCEEEECCCCC-------------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 77655433346899988875330 122668888999999887 5 78
Q ss_pred cEEeecCC---CCc---ee------ecCeeeeeeeccchhhhccccchhhhhHHHHHHHHhh---CceEEEecccccccc
Q psy13907 225 PLKAKPNR---SLF---ET------YHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILE---NKLYLIDGGFSSQLS 289 (698)
Q Consensus 225 ~~~~~pna---g~p---~~------~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~---~~~~i~dG~~gt~l~ 289 (698)
||.+|-+- |.. +. .+++.+.|.+. +++. . .+..+... .. .+..|+.|.=...+.
T Consensus 159 PiilYn~P~~tg~~l~~e~~~~La~~~pnIvgiKds--------sgd~-~-~~~~l~~~-~~~~~~~f~v~~G~D~~~l~ 227 (343)
T 2v9d_A 159 PVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDT--------IDSV-A-HLRSMIHT-VKGAHPHFTVLCGYDDHLFN 227 (343)
T ss_dssp CEEEEECHHHHSSCCCHHHHHHHHHHCTTEEEEEEC--------CSCH-H-HHHHHHHH-HHHHCTTCEEEESSGGGHHH
T ss_pred CEEEEeCchhcCcCCCHHHHHHHHHhCCCEEEEEeC--------CCCH-H-HHHHHHHh-cCCCCCCEEEEECcHHHHHH
Confidence 89888763 321 10 11223333321 1110 0 11122222 22 567788776555443
Q ss_pred cc-cCCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 290 KH-VGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 290 ~~-~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
.. .|.+ -.++...|+ .|+.+.++++.|.
T Consensus 228 ~l~~Ga~-------G~is~~anv-~P~~~~~l~~a~~ 256 (343)
T 2v9d_A 228 TLLLGGD-------GAISASGNF-APQVSVNLLKAWR 256 (343)
T ss_dssp HHHTTCC-------EECCGGGTT-CHHHHHHHHHHHH
T ss_pred HHHCCCC-------EEEeCHHHh-HHHHHHHHHHHHH
Confidence 32 0222 244566666 7888888888775
No 14
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=93.24 E-value=1.6 Score=45.43 Aligned_cols=183 Identities=15% Similarity=0.032 Sum_probs=106.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecCc-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-ETLP-----AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-ETi~-----~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ =|-. +.+|=+.+++.+.+. ..+||++... +.+..+
T Consensus 24 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 90 (297)
T 3flu_A 24 SIHYE----QLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG---------ANNTVE 90 (297)
T ss_dssp CBCHH----HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CcCHHH
Confidence 45554 4556778888899998775 3332 577877788777653 3589998652 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-. + .+...+.+..+.++++++ + +.
T Consensus 91 ai~la~~a~~~Gadavlv~~P~--y-----------------------~~~~~~~l~~~f~~va~a------~-----~l 134 (297)
T 3flu_A 91 AIALSQAAEKAGADYTLSVVPY--Y-----------------------NKPSQEGIYQHFKTIAEA------T-----SI 134 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC--S-----------------------SCCCHHHHHHHHHHHHHH------C-----CS
T ss_pred HHHHHHHHHHcCCCEEEECCCC--C-----------------------CCCCHHHHHHHHHHHHHh------C-----CC
Confidence 7765543344789998876532 0 012567889999999887 5 78
Q ss_pred cEEeecCCC---Cc---ee-----ecCeeeeeeeccchhhhccccchhhhhHHHHHHHH--hhCceEEEecccccccccc
Q psy13907 225 PLKAKPNRS---LF---ET-----YHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFI--LENKLYLIDGGFSSQLSKH 291 (698)
Q Consensus 225 ~~~~~pnag---~p---~~-----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~--~~~~~~i~dG~~gt~l~~~ 291 (698)
||.+|-+-+ .. +. .+++.+.+.+. + .++..+.+.+ ...+..|+.|.-...+...
T Consensus 135 PiilYn~P~~tg~~l~~~~~~~La~~pnivgiKds--------s-----gd~~~~~~~~~~~~~~f~v~~G~d~~~l~~l 201 (297)
T 3flu_A 135 PMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVKEA--------S-----GNIGSNIELINRAPEGFVVLSGDDHTALPFM 201 (297)
T ss_dssp CEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEEC--------S-----CCHHHHHHHHHHSCTTCEEEECCGGGHHHHH
T ss_pred CEEEEECCchhccCCCHHHHHHHHcCCCEEEEEeC--------C-----CCHHHHHHHHHhcCCCeEEEECcHHHHHHHH
Confidence 898886632 21 10 01223333321 1 1222222222 2345777777654444332
Q ss_pred -cCCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 292 -VGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 292 -~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
.|.+ -..|...|+ .|+...++++.|.
T Consensus 202 ~~G~~-------G~is~~an~-~P~~~~~l~~a~~ 228 (297)
T 3flu_A 202 LCGGH-------GVITVAANA-APKLFADMCRAAL 228 (297)
T ss_dssp HTTCC-------EEEESGGGT-CHHHHHHHHHHHH
T ss_pred hCCCC-------EEEechHhh-hHHHHHHHHHHHH
Confidence 0222 123455666 6888888887774
No 15
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=93.19 E-value=1.3 Score=45.79 Aligned_cols=182 Identities=12% Similarity=0.025 Sum_probs=109.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 146 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~ 146 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+..+- +++.. .+.+..+++
T Consensus 15 ~iD~~----~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gv---------g~~~t~~ai 80 (286)
T 2r91_A 15 RLDPE----LFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQV---------ASLNADEAI 80 (286)
T ss_dssp EECHH----HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEEC---------CCSSHHHHH
T ss_pred ccCHH----HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEee---------CCCCHHHHH
Confidence 35554 4556778888899999876 432 3677888888888765333 55443 234567777
Q ss_pred HHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccC-CChHHHHHHHHHHHHcCCCCCCCcCCCcCcc
Q psy13907 147 RDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLIS-RKPIQLLSIELELAAAGKMPSGTTQIPFEAP 225 (698)
Q Consensus 147 ~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~-~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 225 (698)
+..+.....|+|++.+-.-. + .+ ..++.+..+.++++++ + +.|
T Consensus 81 ~la~~A~~~Gadavlv~~P~--y-----------------------~~~~s~~~l~~~f~~va~a------~-----~lP 124 (286)
T 2r91_A 81 ALAKYAESRGAEAVASLPPY--Y-----------------------FPRLSERQIAKYFRDLCSA------V-----SIP 124 (286)
T ss_dssp HHHHHHHHTTCSEEEECCSC--S-----------------------STTCCHHHHHHHHHHHHHH------C-----SSC
T ss_pred HHHHHHHhcCCCEEEEcCCc--C-----------------------CCCCCHHHHHHHHHHHHHh------c-----CCC
Confidence 65543344789998887533 1 11 2678899999999987 5 789
Q ss_pred EEeecCC---CCc---eee--cCeeeeeeeccchhhhccccchhhhhHHHHHHHH-hhCceEEEecccccccccc-cCCC
Q psy13907 226 LKAKPNR---SLF---ETY--HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFI-LENKLYLIDGGFSSQLSKH-VGED 295 (698)
Q Consensus 226 ~~~~pna---g~p---~~~--~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-~~~~~~i~dG~~gt~l~~~-~g~~ 295 (698)
|.+|-+- |.. +.. +++.+.|.+. ++ ++..+.+.+ ...+..|+.|.=...+... .|.+
T Consensus 125 iilYn~P~~tg~~l~~~~~~~~pnivgiKds--------~g-----d~~~~~~~~~~~~~f~v~~G~d~~~~~~l~~G~~ 191 (286)
T 2r91_A 125 VFLYNYPAAVGRDVDARAAKELGCIRGVKDT--------NE-----SLAHTLAYKRYLPQARVYNGSDSLVFASFAVRLD 191 (286)
T ss_dssp EEEEECHHHHSSCCCHHHHHHHSCEEEEEEC--------CS-----CHHHHHHHHHHCTTSEEEECCGGGHHHHHHTTCS
T ss_pred EEEEeChhhcCCCCCHHHHHhcCCEEEEEeC--------CC-----CHHHHHHHHhcCCCEEEEEccHHHHHHHHHcCCC
Confidence 9998763 321 111 2334433332 11 122222222 2446777877655444332 0222
Q ss_pred CcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 296 NVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 296 ~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
-.++...|+ .|+.+.++++.|.
T Consensus 192 -------G~is~~an~-~P~~~~~l~~a~~ 213 (286)
T 2r91_A 192 -------GVVASSANY-LPELLAGIRDAVA 213 (286)
T ss_dssp -------EECCGGGTT-CHHHHHHHHHHHH
T ss_pred -------EEEecHHHh-CHHHHHHHHHHHH
Confidence 244566776 8999999988875
No 16
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=92.88 E-value=1.3 Score=46.47 Aligned_cols=110 Identities=10% Similarity=-0.045 Sum_probs=74.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecCc-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-ETLP-----AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-ETi~-----~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ =|-. +.+|-+.+++.+.+. ..+||++... +.+..+
T Consensus 40 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg---------~~st~e 106 (314)
T 3qze_A 40 RLDWD----SLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG---------ANSTRE 106 (314)
T ss_dssp CBCHH----HHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CcCHHH
Confidence 45554 4566777788899998776 2222 577877777777654 3589998652 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-. + .+..++.+....++++++ + +.
T Consensus 107 ai~la~~A~~~Gadavlv~~P~--y-----------------------~~~s~~~l~~~f~~va~a------~-----~l 150 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLVTPY--Y-----------------------NKPTQEGMYQHFRHIAEA------V-----AI 150 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC--S-----------------------SCCCHHHHHHHHHHHHHH------S-----CS
T ss_pred HHHHHHHHHHcCCCEEEEcCCC--C-----------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 7765543344789998886532 0 122567899999999887 5 78
Q ss_pred cEEeecC
Q psy13907 225 PLKAKPN 231 (698)
Q Consensus 225 ~~~~~pn 231 (698)
||.+|-+
T Consensus 151 PiilYn~ 157 (314)
T 3qze_A 151 PQILYNV 157 (314)
T ss_dssp CEEEEEC
T ss_pred CEEEEeC
Confidence 9998876
No 17
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=92.82 E-value=0.78 Score=47.95 Aligned_cols=183 Identities=15% Similarity=0.028 Sum_probs=107.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecCc-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-ETLP-----AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-ETi~-----~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ =|-. +.+|=+.+++.+.+. ..+||++... +.+..+
T Consensus 32 ~iD~~----~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 98 (304)
T 3l21_A 32 SLDTA----TAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG---------TYDTAH 98 (304)
T ss_dssp CBCHH----HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC---------CSCHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC---------CCCHHH
Confidence 45554 5566778888899998765 2322 578888888877664 3589998752 345667
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-.+ .+..++.+..+.++++++ + +.
T Consensus 99 ai~la~~a~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~va~a------~-----~l 142 (304)
T 3l21_A 99 SIRLAKACAAEGAHGLLVVTPYY-------------------------SKPPQRGLQAHFTAVADA------T-----EL 142 (304)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHTS------C-----SS
T ss_pred HHHHHHHHHHcCCCEEEECCCCC-------------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 77655433346899988876330 112567889999999887 5 78
Q ss_pred cEEeecCC---CCc---ee-----ecCeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCceEEEecccccccccc-c
Q psy13907 225 PLKAKPNR---SLF---ET-----YHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKLYLIDGGFSSQLSKH-V 292 (698)
Q Consensus 225 ~~~~~pna---g~p---~~-----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~i~dG~~gt~l~~~-~ 292 (698)
||.+|-+- |.. +. .+++.+.+.+. +-++..+.+.+...+..|+.|.-...+... .
T Consensus 143 PiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds-------------sgd~~~~~~~~~~~~f~v~~G~d~~~l~~l~~ 209 (304)
T 3l21_A 143 PMLLYDIPGRSAVPIEPDTIRALASHPNIVGVXDA-------------KADLHSGAQIMADTGLAYYSGDDALNLPWLRM 209 (304)
T ss_dssp CEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEEC-------------SCCHHHHHHHHHHHCCEEEESSGGGHHHHHHH
T ss_pred CEEEEeCccccCCCCCHHHHHHHhcCCCEEEEECC-------------CCCHHHHHHHhcCCCeEEEeCchHHHHHHHHc
Confidence 89888663 221 10 11223333332 112233333333445677777544433322 0
Q ss_pred CCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 293 GEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 293 g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
|.+ -.++...|+ .|+.+.++++.|.
T Consensus 210 Ga~-------G~is~~~n~-~P~~~~~l~~a~~ 234 (304)
T 3l21_A 210 GAT-------GFISVIAHL-AAGQLRELLSAFG 234 (304)
T ss_dssp TCC-------EEEESTHHH-HHHHHHHHHHHHH
T ss_pred CCC-------EEEecHHhh-hHHHHHHHHHHHH
Confidence 222 123455666 6888888887775
No 18
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=92.72 E-value=1.2 Score=46.34 Aligned_cols=110 Identities=14% Similarity=-0.018 Sum_probs=75.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecCc-----CHHHHHHHHHHHHhc--C-CCeEEEEEEEcCCCccCCCCCHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-ETLP-----AQEEAMVLAELIKEY--P-GLKAWISFSCKDEKHTCHGDKFG 143 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-ETi~-----~l~Ea~aa~~a~~~~--~-~~Pv~iSft~~~~g~l~~G~~~~ 143 (698)
.++.+ .++..++.+++.|||.|++ =|-. +.+|=+.+++.+.+. . .+|+++... +.+..
T Consensus 24 ~iD~~----~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg---------~~~t~ 90 (301)
T 3m5v_A 24 KVDEQ----SYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG---------SNATH 90 (301)
T ss_dssp EECHH----HHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC---------CSSHH
T ss_pred CCCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC---------CCCHH
Confidence 35554 4556677888899999876 2222 577877888877764 3 589998652 34567
Q ss_pred HHHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcC
Q psy13907 144 LIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFE 223 (698)
Q Consensus 144 ~~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~ 223 (698)
++++..+.....|+|++.+-.-.+ .+..++.+..+.++++++ + +
T Consensus 91 ~ai~la~~a~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~va~a------~-----~ 134 (301)
T 3m5v_A 91 EAVGLAKFAKEHGADGILSVAPYY-------------------------NKPTQQGLYEHYKAIAQS------V-----D 134 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHHH------C-----S
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCC-------------------------CCCCHHHHHHHHHHHHHh------C-----C
Confidence 777755433457899998876330 112567899999999887 5 7
Q ss_pred ccEEeecC
Q psy13907 224 APLKAKPN 231 (698)
Q Consensus 224 ~~~~~~pn 231 (698)
.||.+|-+
T Consensus 135 lPiilYn~ 142 (301)
T 3m5v_A 135 IPVLLYNV 142 (301)
T ss_dssp SCEEEEEC
T ss_pred CCEEEEeC
Confidence 88988866
No 19
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=92.51 E-value=1.2 Score=46.35 Aligned_cols=111 Identities=14% Similarity=-0.014 Sum_probs=75.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..+||++... +.+..+
T Consensus 17 ~iD~~----~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 83 (297)
T 2rfg_A 17 QVDEK----ALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG---------SNNPVE 83 (297)
T ss_dssp EECHH----HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC---------CCCHHH
Confidence 35554 4566788888899999875 432 3677877777777653 3589987662 345667
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-. + .+...+.+....++++++ + +.
T Consensus 84 ai~la~~A~~~Gadavlv~~P~--y-----------------------~~~s~~~l~~~f~~va~a------~-----~l 127 (297)
T 2rfg_A 84 AVRYAQHAQQAGADAVLCVAGY--Y-----------------------NRPSQEGLYQHFKMVHDA------I-----DI 127 (297)
T ss_dssp HHHHHHHHHHHTCSEEEECCCT--T-----------------------TCCCHHHHHHHHHHHHHH------C-----SS
T ss_pred HHHHHHHHHhcCCCEEEEcCCC--C-----------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 7765543334689998887633 1 112668899999999887 5 78
Q ss_pred cEEeecCC
Q psy13907 225 PLKAKPNR 232 (698)
Q Consensus 225 ~~~~~pna 232 (698)
||.+|-+-
T Consensus 128 PiilYn~P 135 (297)
T 2rfg_A 128 PIIVYNIP 135 (297)
T ss_dssp CEEEEECH
T ss_pred CEEEEeCc
Confidence 89988764
No 20
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=92.44 E-value=1.3 Score=45.88 Aligned_cols=179 Identities=10% Similarity=0.039 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHhCCCCEEEE-ecCc-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhh
Q psy13907 81 DYHRPRIEALIQGGIDLLAI-ETLP-----AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAK 152 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~-ETi~-----~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~ 152 (698)
+.++..++.+++.|||.|++ =|-. +.+|=+.+++.+.+. ..+|+++... +.+..++++..+..
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ai~la~~a 93 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG---------TNDTEKSIQASIQA 93 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------cccHHHHHHHHHHH
Confidence 45666788888899999875 2222 577877777777654 3589998652 34566777655333
Q ss_pred CCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCccEEeecCC
Q psy13907 153 NPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNR 232 (698)
Q Consensus 153 ~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~pna 232 (698)
...|+|++.+-.-.+ .+...+.+..+.++++++ + +.||.+|-+-
T Consensus 94 ~~~Gadavlv~~P~y-------------------------~~~~~~~l~~~f~~ia~a------~-----~lPiilYn~P 137 (292)
T 3daq_A 94 KALGADAIMLITPYY-------------------------NKTNQRGLVKHFEAIADA------V-----KLPVVLYNVP 137 (292)
T ss_dssp HHHTCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHHH------H-----CSCEEEEECH
T ss_pred HHcCCCEEEECCCCC-------------------------CCCCHHHHHHHHHHHHHh------C-----CCCEEEEecc
Confidence 346889888865320 112567888999999887 5 7888888653
Q ss_pred C---Cc---ee-----ecCeeeeeeeccchhhhccccchhhhhHHHHHHHH--hhC-ceEEEecccccccccc-cCCCCc
Q psy13907 233 S---LF---ET-----YHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFI--LEN-KLYLIDGGFSSQLSKH-VGEDNV 297 (698)
Q Consensus 233 g---~p---~~-----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~--~~~-~~~i~dG~~gt~l~~~-~g~~~~ 297 (698)
+ .. +. .+++.+.+.+. ++ ++..+.+.+ ..+ +..|+.|.-...+... .|.
T Consensus 138 ~~tg~~l~~~~~~~La~~pnivgiK~s--------sg-----d~~~~~~~~~~~~~~~f~v~~G~d~~~~~~l~~G~--- 201 (292)
T 3daq_A 138 SRTNMTIEPETVEILSQHPYIVALKDA--------TN-----DFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGG--- 201 (292)
T ss_dssp HHHSCCCCHHHHHHHHTSTTEEEEEEC--------CC-----CHHHHHHHHTTSCTTTSEEEESCGGGHHHHHHTTC---
T ss_pred cccCCCCCHHHHHHHhcCCCEEEEEeC--------CC-----CHHHHHHHHHHCCCCCEEEEECCHHHHHHHHhcCC---
Confidence 2 21 11 02223333332 11 222233322 123 5677777765554433 022
Q ss_pred CcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 298 TEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 298 ~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
.-.|+...|+ .|+.+.++++.|.
T Consensus 202 ----~G~is~~~n~-~P~~~~~l~~a~~ 224 (292)
T 3daq_A 202 ----QGVISVIANV-IPKEFQALYDAQQ 224 (292)
T ss_dssp ----CEEEESGGGT-CHHHHHHHHHHHH
T ss_pred ----CEEEeCHHHh-hHHHHHHHHHHHH
Confidence 2245666666 7888888887764
No 21
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=92.34 E-value=1.1 Score=46.41 Aligned_cols=185 Identities=13% Similarity=0.001 Sum_probs=107.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecCc-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-ETLP-----AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-ETi~-----~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ =|-. +.+|-+.+++.+.+. ..+|+++... +.+..+
T Consensus 18 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 84 (291)
T 3tak_A 18 GVDWK----SLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG---------ANSTRE 84 (291)
T ss_dssp CBCHH----HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC---------CCCHHH
Confidence 46654 4556677788899997764 3443 678888888877764 3589997652 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+..+..|+|++.+-.-. + .+...+.+..+.++++++ + +.
T Consensus 85 ai~la~~a~~~Gadavlv~~P~--y-----------------------~~~~~~~l~~~f~~ia~a------~-----~l 128 (291)
T 3tak_A 85 AIELTKAAKDLGADAALLVTPY--Y-----------------------NKPTQEGLYQHYKAIAEA------V-----EL 128 (291)
T ss_dssp HHHHHHHHHHHTCSEEEEECCC--S-----------------------SCCCHHHHHHHHHHHHHH------C-----CS
T ss_pred HHHHHHHHHhcCCCEEEEcCCC--C-----------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 7765543334688998876532 0 112567889999999887 5 78
Q ss_pred cEEeecCC---CCc---ee-----ecCeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCceEEEecccccccccc-c
Q psy13907 225 PLKAKPNR---SLF---ET-----YHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKLYLIDGGFSSQLSKH-V 292 (698)
Q Consensus 225 ~~~~~pna---g~p---~~-----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~i~dG~~gt~l~~~-~ 292 (698)
||.+|-+- |.. +. .+++.+.+.+. +++. ..+..+.+. ...+..++.|.-...+... .
T Consensus 129 PiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~s--------sgd~--~~~~~~~~~-~~~~f~v~~G~d~~~~~~l~~ 197 (291)
T 3tak_A 129 PLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIKDA--------TGDV--PRGKALIDA-LNGKMAVYSGDDETAWELMLL 197 (291)
T ss_dssp CEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEEC--------SCCH--HHHHHHHHH-HTTSSEEEECCHHHHHHHHHT
T ss_pred CEEEEecccccCCCCCHHHHHHHHcCCCEEEEEeC--------CCCH--HHHHHHHHH-cCCCeEEEECcHHHHHHHHHC
Confidence 88888662 221 00 11223333331 1111 011122222 2456777777655444332 0
Q ss_pred CCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 293 GEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 293 g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
|.. -.+|...|+ .|+.+.++++.|.
T Consensus 198 G~~-------G~is~~~n~-~P~~~~~l~~a~~ 222 (291)
T 3tak_A 198 GAD-------GNISVTANI-APKAMSEVCAVAI 222 (291)
T ss_dssp TCC-------EEEESGGGT-CHHHHHHHHHHHH
T ss_pred CCC-------EEEechhhh-cHHHHHHHHHHHH
Confidence 222 244566666 7888888887774
No 22
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=92.12 E-value=1.1 Score=46.57 Aligned_cols=181 Identities=14% Similarity=0.031 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhh
Q psy13907 81 DYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAK 152 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~ 152 (698)
+.++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..+|+++... +.+..++++..+..
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg---------~~~t~~ai~la~~a 92 (291)
T 3a5f_A 22 DKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG---------SNNTAASIAMSKWA 92 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------cccHHHHHHHHHHH
Confidence 35566788888899999876 532 3677877777777653 3589987662 34567777655433
Q ss_pred CCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCccEEeecCC
Q psy13907 153 NPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNR 232 (698)
Q Consensus 153 ~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~pna 232 (698)
+..|+|++.+-.-.+ .+..++.+..+.++++++ + +.||.+|-+-
T Consensus 93 ~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~ia~a------~-----~lPiilYn~P 136 (291)
T 3a5f_A 93 ESIGVDGLLVITPYY-------------------------NKTTQKGLVKHFKAVSDA------V-----STPIIIYNVP 136 (291)
T ss_dssp HHTTCSEEEEECCCS-------------------------SCCCHHHHHHHC-CTGGG------C-----CSCEEEEECH
T ss_pred HhcCCCEEEEcCCCC-------------------------CCCCHHHHHHHHHHHHHh------c-----CCCEEEEeCc
Confidence 447899998876331 112567777787777776 4 6788888663
Q ss_pred C---Cc---eee-----cCeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCceEEEecccccccccc-cCCCCcCcC
Q psy13907 233 S---LF---ETY-----HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKLYLIDGGFSSQLSKH-VGEDNVTEK 300 (698)
Q Consensus 233 g---~p---~~~-----~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~i~dG~~gt~l~~~-~g~~~~~~~ 300 (698)
+ .. +.. +++.+.|.+. +++. . .+..+... ..++..|+.|.=...+... .|.+
T Consensus 137 ~~tg~~l~~~~~~~La~~pnivgiK~s--------~gd~-~-~~~~~~~~-~~~~f~v~~G~d~~~~~~l~~G~~----- 200 (291)
T 3a5f_A 137 GRTGLNITPGTLKELCEDKNIVAVXEA--------SGNI-S-QIAQIKAL-CGDKLDIYSGNDDQIIPILALGGI----- 200 (291)
T ss_dssp HHHSCCCCHHHHHHHTTSTTEEEEEEC--------SCCH-H-HHHHHHHH-HGGGSEEEESCGGGHHHHHHTTCC-----
T ss_pred cccCCCCCHHHHHHHHcCCCEEEEeCC--------CCCH-H-HHHHHHHh-cCCCeEEEeCcHHHHHHHHHCCCC-----
Confidence 2 11 100 1223322321 1110 0 11122222 2345777777655444332 0222
Q ss_pred CCcccchhhcccChHHHHHHHHHHH
Q psy13907 301 DNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 301 ~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
-.++...|+ .|+.+.++++.|.
T Consensus 201 --G~is~~an~-~P~~~~~l~~a~~ 222 (291)
T 3a5f_A 201 --GVISVLANV-IPEDVHNMCELYL 222 (291)
T ss_dssp --EEEESGGGT-CHHHHHHHHHHHH
T ss_pred --EEEecHHHh-cHHHHHHHHHHHH
Confidence 244566666 7888888888775
No 23
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=92.03 E-value=2.6 Score=44.24 Aligned_cols=114 Identities=15% Similarity=0.078 Sum_probs=75.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecC-----cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-ETL-----PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-ETi-----~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ =|- -+.+|=+.+++.+.+. ..+||++... +.+..+
T Consensus 28 ~iD~~----~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 94 (318)
T 3qfe_A 28 TLDLA----SQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG---------AHSTRQ 94 (318)
T ss_dssp EECHH----HHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC---------CSSHHH
T ss_pred CCCHH----HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CCCHHH
Confidence 35554 5566788888899998765 222 2577877888777664 3589997652 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-. +.. -...++.+..+.++++++ + +.
T Consensus 95 ai~la~~a~~~Gadavlv~~P~--y~~---------------------kp~~~~~l~~~f~~ia~a------~-----~l 140 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVLPPA--YFG---------------------KATTPPVIKSFFDDVSCQ------S-----PL 140 (318)
T ss_dssp HHHHHHHHHHHTCSEEEECCCC--C------------------------CCCHHHHHHHHHHHHHH------C-----SS
T ss_pred HHHHHHHHHHcCCCEEEEeCCc--ccC---------------------CCCCHHHHHHHHHHHHhh------C-----CC
Confidence 7765543334689999885532 100 001467889999999887 5 78
Q ss_pred cEEeecCCC
Q psy13907 225 PLKAKPNRS 233 (698)
Q Consensus 225 ~~~~~pnag 233 (698)
||.+|-+-+
T Consensus 141 PiilYn~P~ 149 (318)
T 3qfe_A 141 PVVIYNFPG 149 (318)
T ss_dssp CEEEEECCC
T ss_pred CEEEEeCCc
Confidence 898887744
No 24
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=91.66 E-value=2.8 Score=43.93 Aligned_cols=185 Identities=16% Similarity=0.021 Sum_probs=107.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecCc-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-ETLP-----AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-ETi~-----~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ =|-. +.+|=+.+++.+.+. ..+||++... +.+..+
T Consensus 39 ~iD~~----~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg---------~~st~~ 105 (315)
T 3si9_A 39 AIDEK----AFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG---------SNSTSE 105 (315)
T ss_dssp CBCHH----HHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CCCHHH
Confidence 46654 4556778888899999873 2221 577877777777654 3589998652 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-. + .+..++.+....++++++ + +.
T Consensus 106 ai~la~~A~~~Gadavlv~~P~--y-----------------------~~~~~~~l~~~f~~va~a------~-----~l 149 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVVTPY--Y-----------------------NRPNQRGLYTHFSSIAKA------I-----SI 149 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC--S-----------------------SCCCHHHHHHHHHHHHHH------C-----SS
T ss_pred HHHHHHHHHhcCCCEEEECCCC--C-----------------------CCCCHHHHHHHHHHHHHc------C-----CC
Confidence 7765543344789998886532 0 112567888999999887 5 78
Q ss_pred cEEeecCCC---Cc---ee-----e-cCeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCceEEEecccccccccc-
Q psy13907 225 PLKAKPNRS---LF---ET-----Y-HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKLYLIDGGFSSQLSKH- 291 (698)
Q Consensus 225 ~~~~~pnag---~p---~~-----~-~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~i~dG~~gt~l~~~- 291 (698)
||.+|-+-+ .. +. . +++.+.|.+. +.+. . .+..+... ...+..|+.|.-...+...
T Consensus 150 PiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKds--------sgd~-~-~~~~l~~~-~~~~f~v~~G~d~~~l~~l~ 218 (315)
T 3si9_A 150 PIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVKDA--------TGKI-E-RASEQREK-CGKDFVQLSGDDCTALGFNA 218 (315)
T ss_dssp CEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEEC--------SCCT-H-HHHHHHHH-HCSSSEEEESCGGGHHHHHH
T ss_pred CEEEEeCchhhCCCCCHHHHHHHHhhCCCEEEEEeC--------CCCH-H-HHHHHHHH-cCCCeEEEecCHHHHHHHHH
Confidence 888887632 21 10 0 2233333332 1110 0 11122222 2456777777655544432
Q ss_pred cCCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 292 VGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 292 ~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
.|.+ -.+|...|+ .|+.+.++++.|.
T Consensus 219 ~G~~-------G~is~~an~-~P~~~~~l~~a~~ 244 (315)
T 3si9_A 219 HGGV-------GCISVSSNV-APKLCAQLHAACL 244 (315)
T ss_dssp TTCC-------EEEESGGGT-CHHHHHHHHHHHH
T ss_pred cCCC-------EEEecHHHh-hHHHHHHHHHHHH
Confidence 0222 234556666 6888888877763
No 25
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=91.63 E-value=2.6 Score=44.08 Aligned_cols=182 Identities=13% Similarity=0.010 Sum_probs=106.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ec-CcCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ET-i~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |. .-+.+|=+.+++.+.+. ..+||++... + +..+
T Consensus 29 ~iD~~----~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg---------~-st~~ 94 (314)
T 3d0c_A 29 EIDWK----GLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG---------Y-SVDT 94 (314)
T ss_dssp CBCHH----HHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC---------S-SHHH
T ss_pred CCCHH----HHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC---------c-CHHH
Confidence 46654 4566777888899999874 32 23677877777777653 3589998762 3 5667
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-.+ .+..++.+....++++++ + +.
T Consensus 95 ai~la~~A~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~va~a------~-----~l 138 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIHQPVH-------------------------PYITDAGAVEYYRNIIEA------L-----DA 138 (314)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCC-------------------------SCCCHHHHHHHHHHHHHH------S-----SS
T ss_pred HHHHHHHHHHcCCCEEEECCCCC-------------------------CCCCHHHHHHHHHHHHHh------C-----CC
Confidence 77655433447899998875330 112567889999999887 5 68
Q ss_pred cEEeecCCCC--ceee-----cCeeeeeeeccchhhhccccchhhhhHHHHHHHH--hhC--ceEEEecccc-cccccc-
Q psy13907 225 PLKAKPNRSL--FETY-----HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFI--LEN--KLYLIDGGFS-SQLSKH- 291 (698)
Q Consensus 225 ~~~~~pnag~--p~~~-----~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~--~~~--~~~i~dG~~g-t~l~~~- 291 (698)
||.+|-..|. |+.. +++.+.|.+. +. ++..+.+.+ ..+ +..|+.|.=. ..+...
T Consensus 139 PiilYn~tg~l~~~~~~~La~~pnIvgiKds--------sg-----d~~~~~~~~~~~~~~~~f~v~~G~d~~~~~~~l~ 205 (314)
T 3d0c_A 139 PSIIYFKDAHLSDDVIKELAPLDKLVGIKYA--------IN-----DIQRVTQVMRAVPKSSNVAFICGTAEKWAPFFYH 205 (314)
T ss_dssp CEEEEECCTTSCTHHHHHHTTCTTEEEEEEC--------CC-----CHHHHHHHHHHSCGGGCCEEEETTHHHHHHHHHH
T ss_pred CEEEEeCCCCcCHHHHHHHHcCCCEEEEEeC--------CC-----CHHHHHHHHHhcCCCCCEEEEEeCcHHHHHHHHH
Confidence 8888864442 1110 1223333321 11 122222222 123 5667777544 333322
Q ss_pred cCCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 292 VGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 292 ~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
.|.+ -.+|...|+ .|+.+.++++.|.
T Consensus 206 ~G~~-------G~is~~an~-~P~~~~~l~~a~~ 231 (314)
T 3d0c_A 206 AGAV-------GFTSGLVNV-FPQKSFALLEALE 231 (314)
T ss_dssp HTCC-------EEEESGGGT-CHHHHHHHHHHHH
T ss_pred cCCC-------EEEecHHHh-hHHHHHHHHHHHH
Confidence 0322 244566666 7888888888775
No 26
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=91.20 E-value=1.4 Score=45.90 Aligned_cols=185 Identities=12% Similarity=0.008 Sum_probs=108.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecCc-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETLP-AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi~-~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |... +.+|=+.+++.+.+. ..+||++.... .+..+
T Consensus 21 ~iD~~----~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~---------~~t~~ 87 (300)
T 3eb2_A 21 RVRAD----VMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS---------TSVAD 87 (300)
T ss_dssp CBCHH----HHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE---------SSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC---------CCHHH
Confidence 45554 5566778888899999863 4222 677877888777664 35899987743 34566
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-. + .+..++.+....++++++ + +.
T Consensus 88 ai~la~~a~~~Gadavlv~~P~--y-----------------------~~~~~~~l~~~f~~va~a------~-----~l 131 (300)
T 3eb2_A 88 AVAQAKLYEKLGADGILAILEA--Y-----------------------FPLKDAQIESYFRAIADA------V-----EI 131 (300)
T ss_dssp HHHHHHHHHHHTCSEEEEEECC--S-----------------------SCCCHHHHHHHHHHHHHH------C-----SS
T ss_pred HHHHHHHHHHcCCCEEEEcCCC--C-----------------------CCCCHHHHHHHHHHHHHH------C-----CC
Confidence 6665433334688988875532 0 112668889999999887 5 78
Q ss_pred cEEeecCCCCce------e-----ecCeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCceEEEecccccccccc-c
Q psy13907 225 PLKAKPNRSLFE------T-----YHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKLYLIDGGFSSQLSKH-V 292 (698)
Q Consensus 225 ~~~~~pnag~p~------~-----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~i~dG~~gt~l~~~-~ 292 (698)
||.+|-+-+... . .+++.+.|.+. +.+. . .+..+.+. ..++..|+.|.-...+... .
T Consensus 132 PiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds--------sgd~-~-~~~~~~~~-~~~~f~v~~G~d~~~~~~l~~ 200 (300)
T 3eb2_A 132 PVVIYTNPQFQRSDLTLDVIARLAEHPRIRYIKDA--------STNT-G-RLLSIINR-CGDALQVFSASAHIPAAVMLI 200 (300)
T ss_dssp CEEEEECTTTCSSCCCHHHHHHHHTSTTEEEEEEC--------SSBH-H-HHHHHHHH-HGGGSEEEECTTSCHHHHHHT
T ss_pred CEEEEECccccCCCCCHHHHHHHHcCCCEEEEEcC--------CCCH-H-HHHHHHHH-cCCCeEEEeCcHHHHHHHHhC
Confidence 898887744211 0 01222222221 1110 0 11122222 2456777777666554433 0
Q ss_pred CCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 293 GEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 293 g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
|.+ -..+...|+ .|+.+.++++.|.
T Consensus 201 G~~-------G~is~~an~-~P~~~~~l~~a~~ 225 (300)
T 3eb2_A 201 GGV-------GWMAGPACI-APRQSVALYELCK 225 (300)
T ss_dssp TCC-------EEEEGGGGT-CHHHHHHHHHHHH
T ss_pred CCC-------EEEeChhhh-hHHHHHHHHHHHH
Confidence 222 233556666 7898888888774
No 27
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=90.70 E-value=2.7 Score=43.42 Aligned_cols=111 Identities=9% Similarity=-0.047 Sum_probs=77.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..+|+++.. .+.+..+
T Consensus 18 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 84 (292)
T 2ojp_A 18 NVCRA----SLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---------GANATAE 84 (292)
T ss_dssp CBCHH----HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHH
Confidence 46654 4555677778889999876 532 3677877777777653 358998766 2346778
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-.+ .+..++.+..+.++++++ + +.
T Consensus 85 ai~la~~a~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~ia~a------~-----~l 128 (292)
T 2ojp_A 85 AISLTQRFNDSGIVGCLTVTPYY-------------------------NRPSQEGLYQHFKAIAEH------T-----DL 128 (292)
T ss_dssp HHHHHHHTTTSSCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHTT------C-----SS
T ss_pred HHHHHHHHHhcCCCEEEECCCCC-------------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 88766555667999998876431 112678899999999887 5 78
Q ss_pred cEEeecCC
Q psy13907 225 PLKAKPNR 232 (698)
Q Consensus 225 ~~~~~pna 232 (698)
||.+|-+-
T Consensus 129 PiilYn~P 136 (292)
T 2ojp_A 129 PQILYNVP 136 (292)
T ss_dssp CEEEECCH
T ss_pred CEEEEeCc
Confidence 89888763
No 28
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=88.32 E-value=3.6 Score=43.42 Aligned_cols=111 Identities=14% Similarity=-0.020 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..+||++... +.+..+
T Consensus 51 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------~~st~e 117 (332)
T 2r8w_A 51 RVDIE----AFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG---------ALRTDE 117 (332)
T ss_dssp CBCHH----HHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 46654 4556677788889999876 432 3677877787777654 3589998762 335667
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-.+ .+...+.+....++++++ + +.
T Consensus 118 ai~la~~A~~~Gadavlv~~P~Y-------------------------~~~s~~~l~~~f~~VA~a------~-----~l 161 (332)
T 2r8w_A 118 AVALAKDAEAAGADALLLAPVSY-------------------------TPLTQEEAYHHFAAVAGA------T-----AL 161 (332)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCS-------------------------SCCCHHHHHHHHHHHHHH------C-----SS
T ss_pred HHHHHHHHHhcCCCEEEECCCCC-------------------------CCCCHHHHHHHHHHHHHh------c-----CC
Confidence 76654333346899988865330 112668899999999887 5 78
Q ss_pred cEEeecCC
Q psy13907 225 PLKAKPNR 232 (698)
Q Consensus 225 ~~~~~pna 232 (698)
||.+|-+-
T Consensus 162 PiilYn~P 169 (332)
T 2r8w_A 162 PLAIYNNP 169 (332)
T ss_dssp CEEEECCH
T ss_pred CEEEEeCc
Confidence 99988763
No 29
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=88.29 E-value=2.8 Score=43.60 Aligned_cols=183 Identities=13% Similarity=-0.018 Sum_probs=107.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..+||++... +.+..+
T Consensus 28 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg---------~~~t~~ 94 (303)
T 2wkj_A 28 ALDKA----SLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG---------CVSTAE 94 (303)
T ss_dssp SBCHH----HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 35554 4566778888899999876 532 3677877777777653 3589998652 335667
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcC-
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFE- 223 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~- 223 (698)
+++..+.....|+|++.+-.-.+ .+..++.+....++++++ + +
T Consensus 95 ai~la~~A~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~va~a------~-----~~ 138 (303)
T 2wkj_A 95 SQQLAASAKRYGFDAVSAVTPFY-------------------------YPFSFEEHCDHYRAIIDS------A-----DG 138 (303)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHHH------H-----TT
T ss_pred HHHHHHHHHhCCCCEEEecCCCC-------------------------CCCCHHHHHHHHHHHHHh------C-----CC
Confidence 77655433346899988876330 112668888999998887 4 5
Q ss_pred ccEEeecCC---CCc---eee-----cCeeeeeeeccchhhhccccchhhhhHHHHHHHHh-hCceEEEecccccccccc
Q psy13907 224 APLKAKPNR---SLF---ETY-----HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFIL-ENKLYLIDGGFSSQLSKH 291 (698)
Q Consensus 224 ~~~~~~pna---g~p---~~~-----~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~~~i~dG~~gt~l~~~ 291 (698)
.||.+|-+- |.. +.. +++.+.|.+. +. ++..+.+.+. ..+..|+.|.=...+...
T Consensus 139 lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK~s--------~g-----d~~~~~~~~~~~~~f~v~~G~d~~~~~~l 205 (303)
T 2wkj_A 139 LPMVVYNIPALSGVKLTLDQINTLVTLPGVGALXQT--------SG-----DLYQMEQIRREHPDLVLYNGYDNIFASGL 205 (303)
T ss_dssp CCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEEEC--------CC-----CHHHHHHHHHHCTTCEEEECCGGGHHHHH
T ss_pred CCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEeCC--------CC-----CHHHHHHHHHhCCCeEEEeCcHHHHHHHH
Confidence 888888763 321 110 1223322221 11 1222222221 235677777655544332
Q ss_pred -cCCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 292 -VGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 292 -~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
.|.+ -.+|...|+ .|+...++++.|.
T Consensus 206 ~~G~~-------G~is~~an~-~P~~~~~l~~a~~ 232 (303)
T 2wkj_A 206 LAGAD-------GGIGSTYNI-MGWRYQGIVKALK 232 (303)
T ss_dssp HHTCC-------EEEETTHHH-HHHHHHHHHHHHH
T ss_pred HCCCC-------EEEeCHHHh-CHHHHHHHHHHHH
Confidence 0222 234556666 7888888888775
No 30
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=88.13 E-value=3.1 Score=43.59 Aligned_cols=111 Identities=17% Similarity=0.097 Sum_probs=76.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecCc-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETLP-AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi~-~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |... +.+|-+.+++.+.+. ..+||++... +.+..+
T Consensus 41 ~iD~~----~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg---------~~~t~~ 107 (315)
T 3na8_A 41 GLDLP----ALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS---------DLTTAK 107 (315)
T ss_dssp SBCHH----HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 45554 5566788888899998774 3222 577888888877764 3589998652 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-. + .+..++.+....++++++ + +.
T Consensus 108 ai~la~~A~~~Gadavlv~~P~--y-----------------------~~~s~~~l~~~f~~va~a------~-----~l 151 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVLPIS--Y-----------------------WKLNEAEVFQHYRAVGEA------I-----GV 151 (315)
T ss_dssp HHHHHHHHHHTTCSEEEECCCC--S-----------------------SCCCHHHHHHHHHHHHHH------C-----SS
T ss_pred HHHHHHHHHhcCCCEEEECCCC--C-----------------------CCCCHHHHHHHHHHHHHh------C-----CC
Confidence 7765543345789999886533 1 112668899999999887 5 68
Q ss_pred cEEeecCC
Q psy13907 225 PLKAKPNR 232 (698)
Q Consensus 225 ~~~~~pna 232 (698)
||.+|-+-
T Consensus 152 PiilYn~P 159 (315)
T 3na8_A 152 PVMLYNNP 159 (315)
T ss_dssp CEEEEECH
T ss_pred cEEEEeCc
Confidence 88888763
No 31
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=88.02 E-value=3.4 Score=43.08 Aligned_cols=111 Identities=10% Similarity=-0.033 Sum_probs=75.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+. ..+||++... +.+..+
T Consensus 29 ~iD~~----~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg---------~~st~~ 95 (306)
T 1o5k_A 29 ELDLE----SYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG---------TNSTEK 95 (306)
T ss_dssp EECHH----HHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSCHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC---------CccHHH
Confidence 45554 4566788888899999876 432 3677877787777654 3589997662 335677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-.+ .+..++.+....++++++ + +.
T Consensus 96 ai~la~~A~~~Gadavlv~~P~y-------------------------~~~s~~~l~~~f~~va~a------~-----~l 139 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVVTPYY-------------------------NKPTQEGLYQHYKYISER------T-----DL 139 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHTT------C-----SS
T ss_pred HHHHHHHHHhcCCCEEEECCCCC-------------------------CCCCHHHHHHHHHHHHHh------C-----CC
Confidence 77655433346899988875330 112667888888888876 5 78
Q ss_pred cEEeecCC
Q psy13907 225 PLKAKPNR 232 (698)
Q Consensus 225 ~~~~~pna 232 (698)
||.+|-+-
T Consensus 140 PiilYn~P 147 (306)
T 1o5k_A 140 GIVVYNVP 147 (306)
T ss_dssp CEEEEECH
T ss_pred CEEEEeCc
Confidence 88888763
No 32
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=87.33 E-value=4.2 Score=42.44 Aligned_cols=113 Identities=14% Similarity=0.112 Sum_probs=74.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecCc-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-ETLP-----AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-ETi~-----~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ =|-. +.+|=+.+++.+.+. ..+||++... +.+..+
T Consensus 25 ~iD~~----~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 91 (309)
T 3fkr_A 25 DLDLA----SQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS---------HYSTQV 91 (309)
T ss_dssp SBCHH----HHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CchHHH
Confidence 45554 5566777888899998776 2222 677877777777654 3589998762 345667
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-. -+...+...+.+..+.++++++ + +.
T Consensus 92 ai~la~~A~~~Gadavlv~~Py----------------------y~~~~~~s~~~l~~~f~~va~a------~-----~l 138 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAMPPY----------------------HGATFRVPEAQIFEFYARVSDA------I-----AI 138 (309)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC----------------------BTTTBCCCHHHHHHHHHHHHHH------C-----SS
T ss_pred HHHHHHHHHHcCCCEEEEcCCC----------------------CccCCCCCHHHHHHHHHHHHHh------c-----CC
Confidence 7765543344789998885422 0001233668888888888887 5 78
Q ss_pred cEEeecC
Q psy13907 225 PLKAKPN 231 (698)
Q Consensus 225 ~~~~~pn 231 (698)
||.+|-+
T Consensus 139 PiilYn~ 145 (309)
T 3fkr_A 139 PIMVQDA 145 (309)
T ss_dssp CEEEEEC
T ss_pred CEEEEeC
Confidence 8888765
No 33
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=87.00 E-value=3.9 Score=42.24 Aligned_cols=183 Identities=11% Similarity=-0.016 Sum_probs=106.8
Q ss_pred CCCHHHHHHHHHHHHHHHHh-CCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHH
Q psy13907 73 STTPQELIDYHRPRIEALIQ-GGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFG 143 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~-~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~ 143 (698)
.++.+ .++..++.+++ .|||.|++ |.. -+.+|=+.+++.+.+. ..+||++... +.+..
T Consensus 20 ~iD~~----~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~ 86 (293)
T 1f6k_A 20 TINEK----GLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG---------SVNLK 86 (293)
T ss_dssp CBCHH----HHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSCHH
T ss_pred CcCHH----HHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC---------CCCHH
Confidence 46654 45567888888 99999876 422 3667777777777653 3589987662 33567
Q ss_pred HHHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcC
Q psy13907 144 LIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFE 223 (698)
Q Consensus 144 ~~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~ 223 (698)
++++..+.....|+|++.+-.-.+ .+...+.+..+.++++++ + +
T Consensus 87 ~ai~la~~a~~~Gadavlv~~P~y-------------------------~~~~~~~l~~~f~~va~a------~-----~ 130 (293)
T 1f6k_A 87 EAVELGKYATELGYDCLSAVTPFY-------------------------YKFSFPEIKHYYDTIIAE------T-----G 130 (293)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHHH------H-----C
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC-------------------------CCCCHHHHHHHHHHHHHh------C-----C
Confidence 777655433346899988876331 112567888999999887 5 6
Q ss_pred ccEEeecCC---CCc---eee-----cCeeeeeeeccchhhhccccchhhhhHHHHHHHHh-hCceEEEecccccccccc
Q psy13907 224 APLKAKPNR---SLF---ETY-----HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFIL-ENKLYLIDGGFSSQLSKH 291 (698)
Q Consensus 224 ~~~~~~pna---g~p---~~~-----~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~~~i~dG~~gt~l~~~ 291 (698)
.||.+|-+- |.. +.. +++.+.|.+. +. ++..+.+.+. ..+..|+.|.-...+...
T Consensus 131 lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK~s--------~g-----d~~~~~~~~~~~~~f~v~~G~d~~~~~~l 197 (293)
T 1f6k_A 131 SNMIVYSIPFLTGVNMGIEQFGELYKNPKVLGVKFT--------AG-----DFYLLERLKKAYPNHLIWAGFDEMMLPAA 197 (293)
T ss_dssp CCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEEEC--------SC-----CHHHHHHHHHHCTTSEEEECCGGGHHHHH
T ss_pred CCEEEEECccccCcCCCHHHHHHHhcCCCEEEEEEC--------CC-----CHHHHHHHHHhCCCeEEEECcHHHHHHHH
Confidence 889888763 221 100 1222222221 11 1222222221 235667777655444332
Q ss_pred -cCCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 292 -VGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 292 -~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
.|.+ -.++...|+ .|+.+.++++.|.
T Consensus 198 ~~G~~-------G~is~~~n~-~P~~~~~l~~a~~ 224 (293)
T 1f6k_A 198 SLGVD-------GAIGSTFNV-NGVRARQIFELTK 224 (293)
T ss_dssp HTTCS-------EEEESTHHH-HHHHHHHHHHHHH
T ss_pred HCCCc-------EEEeCHHHh-hHHHHHHHHHHHH
Confidence 0222 234556666 7888888888774
No 34
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=86.59 E-value=5.4 Score=42.41 Aligned_cols=48 Identities=15% Similarity=0.243 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEc
Q psy13907 82 YHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCK 131 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~ 131 (698)
.-..|++.|.++|+|++=+ |+|+.++++ ++..+++..++|+++-+.|+
T Consensus 47 atv~Qi~~l~~aG~diVRv-avp~~~~a~-al~~I~~~~~vPlvaDiHf~ 94 (366)
T 3noy_A 47 ATLNQIKRLYEAGCEIVRV-AVPHKEDVE-ALEEIVKKSPMPVIADIHFA 94 (366)
T ss_dssp HHHHHHHHHHHTTCCEEEE-ECCSHHHHH-HHHHHHHHCSSCEEEECCSC
T ss_pred HHHHHHHHHHHcCCCEEEe-CCCChHHHH-HHHHHHhcCCCCEEEeCCCC
Confidence 4556999999999999987 899976655 45555555789999988774
No 35
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=85.41 E-value=6.3 Score=41.01 Aligned_cols=113 Identities=8% Similarity=-0.063 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+. ..+||++... +.+..+
T Consensus 31 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 97 (307)
T 3s5o_A 31 EVDYG----KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG---------CESTQA 97 (307)
T ss_dssp CBCHH----HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC---------CCCHHH
Confidence 45654 5566788888999998875 322 2577888888888764 3589987652 345677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....++|++.+-.-. +.. -+..++.+..+.++++++ + +.
T Consensus 98 ai~la~~A~~~Gadavlv~~P~--y~~---------------------~~~s~~~l~~~f~~ia~a------~-----~l 143 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVVTPC--YYR---------------------GRMSSAALIHHYTKVADL------S-----PI 143 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC--TTG---------------------GGCCHHHHHHHHHHHHHH------C-----SS
T ss_pred HHHHHHHHHHcCCCEEEEcCCC--cCC---------------------CCCCHHHHHHHHHHHHhh------c-----CC
Confidence 7765543334789999886533 100 011567888999999887 5 78
Q ss_pred cEEeecCC
Q psy13907 225 PLKAKPNR 232 (698)
Q Consensus 225 ~~~~~pna 232 (698)
||.+|-+-
T Consensus 144 PiilYn~P 151 (307)
T 3s5o_A 144 PVVLYSVP 151 (307)
T ss_dssp CEEEEECH
T ss_pred CEEEEeCC
Confidence 88888763
No 36
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=84.96 E-value=10 Score=39.04 Aligned_cols=183 Identities=8% Similarity=-0.012 Sum_probs=111.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 146 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~ 146 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|=+.+++.+.+..+- +++.. .+.+..+++
T Consensus 16 ~iD~~----~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGv---------g~~~t~~ai 81 (288)
T 2nuw_A 16 KVNVD----ALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQV---------GSLNLNDVM 81 (288)
T ss_dssp CBCHH----HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEEC---------CCSCHHHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEee---------CCCCHHHHH
Confidence 45554 4566777888899999876 533 3677888888888875333 55433 234567777
Q ss_pred HHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccC-CChHHHHHHHHHHHHcCCCCCCCcCCCcCcc
Q psy13907 147 RDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLIS-RKPIQLLSIELELAAAGKMPSGTTQIPFEAP 225 (698)
Q Consensus 147 ~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~-~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 225 (698)
+..+.....|+|++.+-.-. + .+ ..++.+..+.++++++ + +.|
T Consensus 82 ~la~~A~~~Gadavlv~~P~--y-----------------------~~~~s~~~l~~~f~~va~a------~-----~lP 125 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSHSPY--Y-----------------------FPRLPEKFLAKYYEEIARI------S-----SHS 125 (288)
T ss_dssp HHHHHHHTSCCSEEEECCCC--S-----------------------SCSCCHHHHHHHHHHHHHH------C-----CSC
T ss_pred HHHHHHHhcCCCEEEEcCCc--C-----------------------CCCCCHHHHHHHHHHHHHh------c-----CCC
Confidence 76544445799999887633 1 11 2668899999999987 5 789
Q ss_pred EEeecCC---CCc---eeecC-eeeeeeeccchhhhccccchhhhhHHHHHHHHhhCceEEEecccccccccccCCCCcC
Q psy13907 226 LKAKPNR---SLF---ETYHG-VFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKLYLIDGGFSSQLSKHVGEDNVT 298 (698)
Q Consensus 226 ~~~~pna---g~p---~~~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~i~dG~~gt~l~~~~g~~~~~ 298 (698)
|.+|-+- |.. +.... +.+.|.+ ++++. . .+..+.. ...+..|+.|.-...+... .
T Consensus 126 iilYn~P~~tg~~l~~~~~~~LnIvgiKd--------ssgd~-~-~~~~~~~--~~~~f~v~~G~d~~~~~~l---~--- 187 (288)
T 2nuw_A 126 LYIYNYPAATGYDIPPSILKSLPVKGIKD--------TNQDL-A-HSLEYKL--NLPGVKVYNGSNTLIYYSL---L--- 187 (288)
T ss_dssp EEEEECHHHHSCCCCHHHHTTTTEEEEEE--------CCSCH-H-HHHHHHH--HSTTCEEEECCGGGHHHHH---T---
T ss_pred EEEEECchHhCcCCCHHHHhccEEEEEEe--------CCCCH-H-HHHHHHh--cCCCeEEEECcHHHHHHHH---H---
Confidence 9998763 321 11110 1222222 21111 1 1112222 2456778887765555444 1
Q ss_pred cCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 299 EKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 299 ~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
. ..-.+|...|+ .|+.+.++++.|.
T Consensus 188 ~-~~G~is~~an~-~P~~~~~l~~a~~ 212 (288)
T 2nuw_A 188 S-LDGVVASFTNF-IPEVIVKQRDLIK 212 (288)
T ss_dssp T-SSEEECGGGGT-CHHHHHHHHHHHH
T ss_pred H-hCEEEecHHHh-CHHHHHHHHHHHH
Confidence 2 23345667777 7999999998875
No 37
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=84.88 E-value=11 Score=41.19 Aligned_cols=134 Identities=14% Similarity=0.085 Sum_probs=89.8
Q ss_pred HHHHHHHHhCCCCEEEecccC---------------CHHHHHH----HHHHHHhcCCCeEEEEEEecCCC----------
Q psy13907 422 RPRIEALIQGGIDLLAIETLP---------------AQEEAMV----LAELIKEYPGLKAWISFSCKDEK---------- 472 (698)
Q Consensus 422 ~~qi~~L~~~GvDlll~ETi~---------------~~~Eaka----a~~a~~~~~~~Pv~iS~t~~~~g---------- 472 (698)
.+.++.|.++||-.+.+|-.. +..|+.. +..+.+. .+.+++|-.-.+...
T Consensus 170 ~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~-~~~d~~IiARTDa~aa~l~~s~~d~ 248 (435)
T 3lg3_A 170 FELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADV-LGVPTLLIARTDADAADLLTSDCDP 248 (435)
T ss_dssp HHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHH-HTCCCEEEEEECTTTCCEESCCCCG
T ss_pred HHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHh-cCCCeEEEEEcCCcccccccccccc
Confidence 466888999999999999643 3555444 4444432 245666666554321
Q ss_pred ---------ccCCC-----CcHHHHHHHHHHhCCCCceEEEEcC--CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCC
Q psy13907 473 ---------HTCHG-----DKFGLIARDVYAKNPAQLVAVGVNC--LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPG 534 (698)
Q Consensus 473 ---------~l~~G-----~~l~~~v~~~~~~~~~~~~~iGlNC--~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~ 534 (698)
++..| ..+.++++....... +.+.|-+-. ..+++++.+.+.+. ....+.+|++...-+
T Consensus 249 rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~~~P~~~La~~~sPsfn--- 324 (435)
T 3lg3_A 249 YDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHAQFPGKLLAYNCSPSFN--- 324 (435)
T ss_dssp GGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSC---
T ss_pred ccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhccccCCeEEEeCCCCCcc---
Confidence 12222 568899888764433 777777744 37788999888887 456678887663221
Q ss_pred CcccccCCChhhHHHHHHHHHHcCCeEEe
Q psy13907 535 QRIWMNKDSVPSVDTYVPRWLDTGVKYVG 563 (698)
Q Consensus 535 ~g~~~~~~~p~~~a~~~~~~~~~G~~iiG 563 (698)
|....++++++.+..++.+.|++++=
T Consensus 325 ---w~~~~~d~~~~~f~~eLa~lG~~~v~ 350 (435)
T 3lg3_A 325 ---WKKNLTDQQIASFQDELSAMGYKYQF 350 (435)
T ss_dssp ---HHHHSCHHHHHHHHHHHHHTTEEEEE
T ss_pred ---ccccCCHHHHHHHHHHHHHcCCcEEE
Confidence 65456788999999999999977664
No 38
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=84.70 E-value=12 Score=40.92 Aligned_cols=135 Identities=14% Similarity=0.083 Sum_probs=90.6
Q ss_pred HHHHHHHHhCCCCEEEecccC---------------CHHHHHHHHHHHHhc---CCCeEEEEEEecCCC-----------
Q psy13907 422 RPRIEALIQGGIDLLAIETLP---------------AQEEAMVLAELIKEY---PGLKAWISFSCKDEK----------- 472 (698)
Q Consensus 422 ~~qi~~L~~~GvDlll~ETi~---------------~~~Eakaa~~a~~~~---~~~Pv~iS~t~~~~g----------- 472 (698)
.+.++.|+++||-.+-+|-.- ++.|...=+.|++.. .+.|++|-.-.+...
T Consensus 170 ~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d~~ 249 (439)
T 3i4e_A 170 FELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDIDDN 249 (439)
T ss_dssp HHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCTT
T ss_pred HHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccccccc
Confidence 366888999999999999643 355554444444321 245666666554311
Q ss_pred --------ccCCC-----CcHHHHHHHHHHhCCCCceEEEEcC--CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCC
Q psy13907 473 --------HTCHG-----DKFGLIARDVYAKNPAQLVAVGVNC--LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQ 535 (698)
Q Consensus 473 --------~l~~G-----~~l~~~v~~~~~~~~~~~~~iGlNC--~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~ 535 (698)
++..| ..+.++++....... +.+.|-+-. ..+++++.+.+.+. ....+.+|+++...+
T Consensus 250 d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~~P~~~l~~~~sPsfn---- 324 (439)
T 3i4e_A 250 DKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQFPGKLLSYNCSPSFN---- 324 (439)
T ss_dssp TGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSC----
T ss_pred cchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcccCCceEEeeCCCCCCc----
Confidence 12222 458899998865444 778887744 47888999988887 556678887764221
Q ss_pred cccccCCChhhHHHHHHHHHHcCCeEEe
Q psy13907 536 RIWMNKDSVPSVDTYVPRWLDTGVKYVG 563 (698)
Q Consensus 536 g~~~~~~~p~~~a~~~~~~~~~G~~iiG 563 (698)
|....+++++..+..++.+.|++++=
T Consensus 325 --w~~~~~~~~~~~f~~eL~~lGv~~v~ 350 (439)
T 3i4e_A 325 --WKKNLDDATIAKFQKELGAMGYKFQF 350 (439)
T ss_dssp --HHHHSCHHHHHTHHHHHHHHTCCEEE
T ss_pred --CcccCCHHHHHHHHHHHHHcCCeEEE
Confidence 54456788899999999999977664
No 39
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=84.69 E-value=3.9 Score=42.77 Aligned_cols=109 Identities=15% Similarity=0.013 Sum_probs=73.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecCc-CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETLP-AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi~-~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |... +.+|=+.+++.+.+. ..+||++... .+..+
T Consensus 29 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg----------~~t~~ 94 (316)
T 3e96_A 29 SIDWH----HYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG----------YATST 94 (316)
T ss_dssp CBCHH----HHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC----------SSHHH
T ss_pred CCCHH----HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC----------cCHHH
Confidence 45554 5566788888899999875 3221 577877777777654 3589998762 24566
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCc
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEA 224 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~ 224 (698)
+++..+.....|+|++.+-.-. + ....++.+....++++++ + +.
T Consensus 95 ai~la~~A~~~Gadavlv~~P~--y-----------------------~~~s~~~l~~~f~~va~a------~-----~l 138 (316)
T 3e96_A 95 AIELGNAAKAAGADAVMIHMPI--H-----------------------PYVTAGGVYAYFRDIIEA------L-----DF 138 (316)
T ss_dssp HHHHHHHHHHHTCSEEEECCCC--C-----------------------SCCCHHHHHHHHHHHHHH------H-----TS
T ss_pred HHHHHHHHHhcCCCEEEEcCCC--C-----------------------CCCCHHHHHHHHHHHHHh------C-----CC
Confidence 6665433334688998875422 0 122678899999999887 5 68
Q ss_pred cEEeecC
Q psy13907 225 PLKAKPN 231 (698)
Q Consensus 225 ~~~~~pn 231 (698)
||.+|-+
T Consensus 139 PiilYn~ 145 (316)
T 3e96_A 139 PSLVYFK 145 (316)
T ss_dssp CEEEEEC
T ss_pred CEEEEeC
Confidence 8988864
No 40
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=83.93 E-value=12 Score=40.93 Aligned_cols=134 Identities=13% Similarity=0.064 Sum_probs=88.5
Q ss_pred HHHHHHHHhCCCCEEEecccC---------------CHHHHH----HHHHHHHhcCCCeEEEEEEecCC-----------
Q psy13907 422 RPRIEALIQGGIDLLAIETLP---------------AQEEAM----VLAELIKEYPGLKAWISFSCKDE----------- 471 (698)
Q Consensus 422 ~~qi~~L~~~GvDlll~ETi~---------------~~~Eak----aa~~a~~~~~~~Pv~iS~t~~~~----------- 471 (698)
.+.++.|.++||-.+-+|-.- ++.|.. |++.+.... +.+++|---.+..
T Consensus 163 ~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~-g~d~vIiARTDA~~a~l~~s~~d~ 241 (433)
T 3eol_A 163 FEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVM-GTPTLIVARTDAEAAKLLTSDIDE 241 (433)
T ss_dssp HHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHH-TCCCEEEEEECTTTCCEESCCCST
T ss_pred HHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhc-CCCEEEEEEcCCccccccccCccc
Confidence 466888999999999999654 344544 444444332 4456665554421
Q ss_pred ----------CccCCC-----CcHHHHHHHHHHhCCCCceEEEEcC--CChhhhHHHHHHhc--CCCCEEEecCCCCCcC
Q psy13907 472 ----------KHTCHG-----DKFGLIARDVYAKNPAQLVAVGVNC--LAPHYVESLLTSAG--RDVPLLCCPNSGETFD 532 (698)
Q Consensus 472 ----------g~l~~G-----~~l~~~v~~~~~~~~~~~~~iGlNC--~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d 532 (698)
.++..| ..+.++++....-.. +.+.|=+-. ..+++++.+.+.+. ....+.+|++....+
T Consensus 242 rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~~~P~~~L~~~~sPsfn- 319 (433)
T 3eol_A 242 RDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHKAHPGKLLAYNCSPSFN- 319 (433)
T ss_dssp TTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTTCCEEEECCSSSC-
T ss_pred ccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcccCCCcccccCCCCCCc-
Confidence 122222 568899988865433 777777755 37888999988886 456677887653111
Q ss_pred CCCcccccCCChhhHHHHHHHHHHcCCeEEe
Q psy13907 533 PGQRIWMNKDSVPSVDTYVPRWLDTGVKYVG 563 (698)
Q Consensus 533 ~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiG 563 (698)
|....+++++..+..++.+.|++++=
T Consensus 320 -----w~~~~~~~~~~~f~~eLa~lGv~~v~ 345 (433)
T 3eol_A 320 -----WKKNLDDATIAKFQRELGAMGYKFQF 345 (433)
T ss_dssp -----HHHHSCHHHHHHHHHHHHHHTEEEEE
T ss_pred -----ccccCChhHHhHHHHHHHHcCCeEEE
Confidence 54345778899999999999977654
No 41
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=83.15 E-value=10 Score=39.18 Aligned_cols=112 Identities=8% Similarity=-0.075 Sum_probs=74.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhcC--CCeEEEEEEEcCCCccCCCCCHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEYP--GLKAWISFSCKDEKHTCHGDKFGL 144 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~~--~~Pv~iSft~~~~g~l~~G~~~~~ 144 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|-+.+++.+.+.. .+|+++... +.+..+
T Consensus 20 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 86 (294)
T 3b4u_A 20 TVDID----AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL---------VDSIED 86 (294)
T ss_dssp SBCHH----HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CccHHH
Confidence 45654 4556778888899999876 532 36778888888887642 479997762 335677
Q ss_pred HHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccC-CChHHHHHHHHHHHHcCCCCCCCcCCC-c
Q psy13907 145 IARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLIS-RKPIQLLSIELELAAAGKMPSGTTQIP-F 222 (698)
Q Consensus 145 ~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~-~gP~~~~~~~~~l~~~~~~~~~~~~~~-~ 222 (698)
+++..+.....|+|++.+-.-. + .+ ..++.+..+.++++++ + | -
T Consensus 87 ai~la~~A~~~Gadavlv~~P~--y-----------------------~~~~s~~~l~~~f~~va~a------~---p~~ 132 (294)
T 3b4u_A 87 AADQSAEALNAGARNILLAPPS--Y-----------------------FKNVSDDGLFAWFSAVFSK------I---GKD 132 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCCC--S-----------------------SCSCCHHHHHHHHHHHHHH------H---CTT
T ss_pred HHHHHHHHHhcCCCEEEEcCCc--C-----------------------CCCCCHHHHHHHHHHHHHh------c---CCC
Confidence 7765543334789998887533 0 11 2567888888888876 2 1 0
Q ss_pred CccEEeecC
Q psy13907 223 EAPLKAKPN 231 (698)
Q Consensus 223 ~~~~~~~pn 231 (698)
+.||.+|-+
T Consensus 133 ~lPiilYn~ 141 (294)
T 3b4u_A 133 ARDILVYNI 141 (294)
T ss_dssp CCCEEEEEC
T ss_pred CCcEEEEEC
Confidence 267777765
No 42
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=83.02 E-value=7.3 Score=40.61 Aligned_cols=184 Identities=14% Similarity=0.087 Sum_probs=105.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-ecC-----cCHHHHHHHHHHHHhc-CCCeEEEEEEEcCCCccCCCCCHHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-ETL-----PAQEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGDKFGLI 145 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-ETi-----~~l~Ea~aa~~a~~~~-~~~Pv~iSft~~~~g~l~~G~~~~~~ 145 (698)
.++.+ .++..++.+++.|||.|++ =|- -+.+|=+.+++.+.+. ..+||++... +.+..++
T Consensus 25 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg---------~~~t~~a 91 (313)
T 3dz1_A 25 KIDDV----SIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVS---------APGFAAM 91 (313)
T ss_dssp CBCHH----HHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECC---------CSSHHHH
T ss_pred CcCHH----HHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecC---------CCCHHHH
Confidence 45554 5566788888899998776 222 2577877777777654 3589987652 3456777
Q ss_pred HHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcC--
Q psy13907 146 ARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFE-- 223 (698)
Q Consensus 146 ~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~-- 223 (698)
++..+.....|+|++.+- .| . +....+.+....++++++ + +
T Consensus 92 i~la~~A~~~Gadavlv~--~P--------------------~----~~~s~~~l~~~f~~va~a------~-----~~~ 134 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIA--PP--------------------P----SLRTDEQITTYFRQATEA------I-----GDD 134 (313)
T ss_dssp HHHHHHHHHHTCSEEEEC--CC--------------------T----TCCSHHHHHHHHHHHHHH------H-----CTT
T ss_pred HHHHHHHHHcCCCEEEEC--CC--------------------C----CCCCHHHHHHHHHHHHHh------C-----CCC
Confidence 765543334688998883 21 1 112567888999999887 4 5
Q ss_pred ccEEeecCC---CCc---e----ee--cCeeeeeeeccchhhhccccchhhhhHHHHHHHHhh---CceEEEeccccccc
Q psy13907 224 APLKAKPNR---SLF---E----TY--HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILE---NKLYLIDGGFSSQL 288 (698)
Q Consensus 224 ~~~~~~pna---g~p---~----~~--~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~---~~~~i~dG~~gt~l 288 (698)
.||.+|-+- |.. + .. .++.+.|.+. +.++ +. .+..+.+.... .+..|+.|.-...+
T Consensus 135 lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKd~-------~~~~-~~-~~~~~~~~~~~~~~~~f~v~~G~d~~~l 205 (313)
T 3dz1_A 135 VPWVLQDYPLTLSVVMTPKVIRQIVMDSASCVMLKHE-------DWPG-LE-KITTLRGFQKDGSLRPLSILCGNGGLFL 205 (313)
T ss_dssp SCEEEEECHHHHCCCCCHHHHHHHHHHCSSEEEEEEC-------CSSC-HH-HHHHHHHHHHHTSSCCCEEEECGGGTTH
T ss_pred CcEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEEcC-------CCCC-HH-HHHHHHHhcCccCCCCeEEEeCCcHHHH
Confidence 888888662 221 1 11 2334444441 1111 11 11122322111 56788888766554
Q ss_pred cc--ccCCCCcCcCCCcccchhhcccChHHHHHHHHHHH
Q psy13907 289 SK--HVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYV 325 (698)
Q Consensus 289 ~~--~~g~~~~~~~~~~lws~~~~l~~Pe~V~~iH~~yl 325 (698)
.. ..|.+ | .++. +. .|+.+.++++.|.
T Consensus 206 ~~~l~~G~~-----G--~i~~--~~-~P~~~~~l~~a~~ 234 (313)
T 3dz1_A 206 DFEMERGAD-----G--AMTG--YC-FPDMLVDVVKLSK 234 (313)
T ss_dssp HHHHHHTCC-----E--EEEC--CS-CHHHHHHHHHHHH
T ss_pred HHHHHCCCc-----E--EEeC--cc-cHHHHHHHHHHHH
Confidence 32 11443 2 2332 33 7999999888775
No 43
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=82.60 E-value=14 Score=38.10 Aligned_cols=142 Identities=8% Similarity=0.025 Sum_probs=89.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++.. .+.+..+
T Consensus 18 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 84 (292)
T 2ojp_A 18 NVCRA----SLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---------GANATAE 84 (292)
T ss_dssp CBCHH----HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHH
Confidence 46664 4556677788889999876 43 34566777777776642 358987655 2346778
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+ ..| .+.+++.+.+.+
T Consensus 85 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~-----~tg---~~l~~~~~~~La---- 152 (292)
T 2ojp_A 85 AISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPS-----RTG---CDLLPETVGRLA---- 152 (292)
T ss_dssp HHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHH-----HHS---CCCCHHHHHHHH----
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcc-----hhc---cCCCHHHHHHHH----
Confidence 88877654456777777755 24566788888776 689999997643 112 145666665543
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQV 579 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~ 579 (698)
+ --||+|= +|| ...++.++.+.
T Consensus 153 ~-~pnivgiK~s~g-d~~~~~~~~~~ 176 (292)
T 2ojp_A 153 K-VKNIIGIXEATG-NLTRVNQIKEL 176 (292)
T ss_dssp T-STTEEEC-CCSC-CTHHHHHHHTT
T ss_pred c-CCCEEEEeCCCC-CHHHHHHHHHh
Confidence 2 2466662 232 35666666544
No 44
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=82.26 E-value=13 Score=38.43 Aligned_cols=142 Identities=11% Similarity=0.029 Sum_probs=86.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++.. .+.+..+
T Consensus 33 ~iD~~----~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~st~~ 99 (304)
T 3cpr_A 33 DIDIA----AGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV---------GTNNTRT 99 (304)
T ss_dssp CBCHH----HHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC---------CCCCHHH
Confidence 46664 4566777888899999876 43 34566777777766642 358987655 2345677
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 100 ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La---- 167 (304)
T 3cpr_A 100 SVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGR-----SG---IPIESDTMRRLS---- 167 (304)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHH-----HS---SCCCHHHHHHHT----
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccc-----cC---cCCCHHHHHHHH----
Confidence 77766433235666666644 24566777887776 7899999976531 11 134565554433
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQV 579 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~ 579 (698)
+ --||+|= +|| ...++..+.+.
T Consensus 168 ~-~pnIvgiKdssg-d~~~~~~~~~~ 191 (304)
T 3cpr_A 168 E-LPTILAVXDAKG-DLVAATSLIKE 191 (304)
T ss_dssp T-STTEEEEEECSC-CHHHHHHHHHH
T ss_pred c-CCCEEEEecCCC-CHHHHHHHHHh
Confidence 2 2456652 333 35666666543
No 45
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=81.30 E-value=9 Score=40.60 Aligned_cols=109 Identities=10% Similarity=-0.042 Sum_probs=72.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 146 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~ 146 (698)
.++.+ .++..++.+++.|||.|++ |.. -+.+|-+.+++. .....+||++... +.+..+++
T Consensus 43 ~ID~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~grvpViaGvg---------~~st~eai 108 (344)
T 2hmc_A 43 TPDFD----ALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKAGIPVIVGTG---------AVNTASAV 108 (344)
T ss_dssp SBCHH----HHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHTTCCEEEECC---------CSSHHHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCCCCcEEEecC---------CCCHHHHH
Confidence 45554 4556777888899999876 422 366777777777 2224689997762 34566776
Q ss_pred HHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccC-CChHHHHHHHHHHHH-cCCCCCCCcCCCcCc
Q psy13907 147 RDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLIS-RKPIQLLSIELELAA-AGKMPSGTTQIPFEA 224 (698)
Q Consensus 147 ~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~-~gP~~~~~~~~~l~~-~~~~~~~~~~~~~~~ 224 (698)
+..+.....|+|++.+-.-. + .+ ...+.+..+.+++++ + + +.
T Consensus 109 ~la~~A~~~Gadavlv~~P~--y-----------------------~~~~s~~~l~~~f~~IA~aa------~-----~l 152 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVIPRV--L-----------------------SRGSVIAAQKAHFKAILSAA------P-----EI 152 (344)
T ss_dssp HHHHHHHHHTCSEEEECCCC--S-----------------------SSTTCHHHHHHHHHHHHHHS------T-----TS
T ss_pred HHHHHHHhcCCCEEEECCCc--c-----------------------CCCCCHHHHHHHHHHHHhhC------C-----CC
Confidence 65533334689999887643 0 01 156788889898888 6 5 67
Q ss_pred cEEeecC
Q psy13907 225 PLKAKPN 231 (698)
Q Consensus 225 ~~~~~pn 231 (698)
||.+|-+
T Consensus 153 PiilYn~ 159 (344)
T 2hmc_A 153 PAVIYNS 159 (344)
T ss_dssp CEEEEEB
T ss_pred cEEEEec
Confidence 8888754
No 46
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=81.18 E-value=35 Score=35.34 Aligned_cols=142 Identities=12% Similarity=0.075 Sum_probs=87.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-ccc-----CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-ETL-----PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-ETi-----~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.+++ +.++..++.+++.|||.|++ -|. -+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 25 ~iD~----~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 91 (309)
T 3fkr_A 25 DLDL----ASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS---------HYSTQV 91 (309)
T ss_dssp SBCH----HHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHH
T ss_pred CcCH----HHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CchHHH
Confidence 4666 44567777888899997766 222 2566777777776653 4589887652 345667
Q ss_pred HHHHHHHhCCCCceEEEEcC--------CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC--------LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVP 552 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC--------~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~ 552 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+ .| . +.+++.+.+.
T Consensus 92 ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~------tg-~--~l~~~~~~~L-- 160 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA------SG-T--ALSAPFLARM-- 160 (309)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG------GC-C--CCCHHHHHHH--
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC------CC-C--CCCHHHHHHH--
Confidence 77765433335667776643 24566778888776 799999996542 12 1 4566555444
Q ss_pred HHHHcCCeEEe---ecCCCchHHHHHHHhc
Q psy13907 553 RWLDTGVKYVG---GCCRTNADDMKNVNQV 579 (698)
Q Consensus 553 ~~~~~G~~iiG---GCCGTtP~hI~al~~~ 579 (698)
.+.--||+| -|+| ..++++++.+.
T Consensus 161 --a~~~pnIvgiK~~~~~-~~~~~~~~~~~ 187 (309)
T 3fkr_A 161 --AREIEQVAYFXIETPG-AANKLRELIRL 187 (309)
T ss_dssp --HHHSTTEEEEEECSSS-HHHHHHHHHHH
T ss_pred --HhhCCCEEEEECCCcc-hHHHHHHHHHh
Confidence 333456676 3333 45666666554
No 47
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=81.13 E-value=14 Score=38.30 Aligned_cols=143 Identities=11% Similarity=0.040 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 29 ~iD~~----~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg---------~~~t~~ 95 (301)
T 1xky_A 29 NIDFA----KTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG---------SNNTHA 95 (301)
T ss_dssp SBCHH----HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSCHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC---------CCCHHH
Confidence 46664 4566777788899999876 43 34566777777776642 3589886552 345667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 96 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La---- 163 (301)
T 1xky_A 96 SIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGR-----SI---VQISVDTVVRLS---- 163 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHH-----HS---SCCCHHHHHHHH----
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccc-----cC---CCCCHHHHHHHH----
Confidence 77765433335667776655 24566777887776 7899999976531 12 145666665543
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
+ --||+|= +|| ...++.++.+..
T Consensus 164 ~-~pnIvgiKdssg-d~~~~~~~~~~~ 188 (301)
T 1xky_A 164 E-IENIVAIKDAGG-DVLTMTEIIEKT 188 (301)
T ss_dssp T-STTEEEEEECSS-CHHHHHHHHHHS
T ss_pred c-CCCEEEEEcCCC-CHHHHHHHHHhc
Confidence 2 2456662 333 456666666543
No 48
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=80.94 E-value=10 Score=39.51 Aligned_cols=105 Identities=11% Similarity=-0.070 Sum_probs=71.6
Q ss_pred HHHHHHHHHHhCCCCEEE-EecCc-----CHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhC
Q psy13907 82 YHRPRIEALIQGGIDLLA-IETLP-----AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKN 153 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il-~ETi~-----~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~ 153 (698)
.++..++.+++.|||.|+ .=|-. +.+|-+.+++.+.+. ..+|+++... +.+..++++..+...
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg---------~~~t~~ai~la~~A~ 99 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG---------TNDTRDSIEFVKEVA 99 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC---------CSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CcCHHHHHHHHHHHH
Confidence 556678888889999765 44433 677888888887764 3579998652 335667776553333
Q ss_pred CCCc-eEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCccEEeecC
Q psy13907 154 PAQL-VAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPN 231 (698)
Q Consensus 154 ~~~~-~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~pn 231 (698)
..++ |++.+-.-.. .+..++.+..+.++++++ + +.||.+|-+
T Consensus 100 ~~Ga~davlv~~P~y-------------------------~~~s~~~l~~~f~~va~a------~-----~lPiilYn~ 142 (311)
T 3h5d_A 100 EFGGFAAGLAIVPYY-------------------------NKPSQEGMYQHFKAIADA------S-----DLPIIIYNI 142 (311)
T ss_dssp HSCCCSEEEEECCCS-------------------------SCCCHHHHHHHHHHHHHS------C-----SSCEEEEEC
T ss_pred hcCCCcEEEEcCCCC-------------------------CCCCHHHHHHHHHHHHHh------C-----CCCEEEEec
Confidence 3565 8888865330 112567899999999887 5 788988866
No 49
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=80.28 E-value=11 Score=39.02 Aligned_cols=140 Identities=13% Similarity=0.055 Sum_probs=85.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-ccc-----CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-ETL-----PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-ETi-----~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.+++ +.++..++.+++.|||.|++ -|. -+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 32 ~iD~----~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 98 (304)
T 3l21_A 32 SLDT----ATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG---------TYDTAH 98 (304)
T ss_dssp CBCH----HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC---------CSCHHH
T ss_pred CcCH----HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC---------CCCHHH
Confidence 4666 44567777888899998765 232 2567777777776653 3579987652 334667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+++++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 99 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La---- 166 (304)
T 3l21_A 99 SIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGR-----SA---VPIEPDTIRALA---- 166 (304)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHH-----HS---SCCCHHHHHHHH----
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccc-----cC---CCCCHHHHHHHh----
Confidence 77665433234556666655 24567888888876 7899999966431 12 145566655443
Q ss_pred HcCCeEEee--cCCCchHHHHHHH
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVN 577 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~ 577 (698)
+ --||+|= +|| +..+++.+.
T Consensus 167 ~-~pnIvgiKdssg-d~~~~~~~~ 188 (304)
T 3l21_A 167 S-HPNIVGVXDAKA-DLHSGAQIM 188 (304)
T ss_dssp T-STTEEEEEECSC-CHHHHHHHH
T ss_pred c-CCCEEEEECCCC-CHHHHHHHh
Confidence 2 2456653 333 456666554
No 50
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=80.27 E-value=16 Score=37.56 Aligned_cols=144 Identities=13% Similarity=0.053 Sum_probs=89.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.+++ +.++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 17 ~iD~----~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 83 (294)
T 2ehh_A 17 EVDY----EALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG---------GNATHE 83 (294)
T ss_dssp EECH----HHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSCHHH
T ss_pred CcCH----HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 4555 44667788888999999876 43 34566777777766642 3589876552 345667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+++
T Consensus 84 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La~~-- 153 (294)
T 2ehh_A 84 AVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSR-----TC---VEISVDTMFKLASE-- 153 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHH-----HS---CCCCHHHHHHHHHH--
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcc-----cC---cCCCHHHHHHHHhh--
Confidence 77665433335666766654 24566777877776 7899999976531 12 14567666665432
Q ss_pred HcCCeEEe--ecCCCchHHHHHHHhcc
Q psy13907 556 DTGVKYVG--GCCRTNADDMKNVNQVP 580 (698)
Q Consensus 556 ~~G~~iiG--GCCGTtP~hI~al~~~v 580 (698)
--||+| =+|| ...++.++.+..
T Consensus 154 --~pnivgiKds~g-d~~~~~~~~~~~ 177 (294)
T 2ehh_A 154 --CENIVASKESTP-NMDRISEIVKRL 177 (294)
T ss_dssp --CTTEEEEEECCS-CHHHHHHHHHHH
T ss_pred --CCCEEEEEeCCC-CHHHHHHHHHhc
Confidence 245666 2333 456777666543
No 51
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=80.11 E-value=12 Score=38.60 Aligned_cols=144 Identities=10% Similarity=-0.029 Sum_probs=90.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.+++ +.++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 17 ~iD~----~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 83 (292)
T 2vc6_A 17 RIDE----VALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG---------SNSTAE 83 (292)
T ss_dssp EECH----HHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHH
T ss_pred CcCH----HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CccHHH
Confidence 4566 44566777888899999875 43 34566777777776643 3589886552 345667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+.. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 84 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La---- 151 (292)
T 2vc6_A 84 AIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGR-----SA---IEIHVETLARIF---- 151 (292)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHH-----HS---CCCCHHHHHHHH----
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccc-----cC---cCCCHHHHHHHH----
Confidence 77765433335677777766 14566777877776 7899999976531 12 145666665554
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
+.--||+|- ++| ...++..+.+..
T Consensus 152 ~~~pnIvgiK~s~g-d~~~~~~~~~~~ 177 (292)
T 2vc6_A 152 EDCPNVKGVXDATG-NLLRPSLERMAC 177 (292)
T ss_dssp HHCTTEEEEEECSC-CTHHHHHHHHHS
T ss_pred hhCCCEEEEecCCC-CHHHHHHHHHHc
Confidence 312456663 333 456777766543
No 52
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=79.98 E-value=8.2 Score=39.74 Aligned_cols=104 Identities=11% Similarity=-0.029 Sum_probs=68.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-cccC-----CHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-ETLP-----AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-ETi~-----~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ -|.. +..|-+.+++.+.+. .+.||++.. .+.+..+
T Consensus 18 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 84 (291)
T 3tak_A 18 GVDWK----SLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT---------GANSTRE 84 (291)
T ss_dssp CBCHH----HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHH
T ss_pred CcCHH----HHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHHH
Confidence 46664 4556677788899997654 4444 577888888777653 358988754 2345667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCC
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNS 527 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNa 527 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-
T Consensus 85 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P 136 (291)
T 3tak_A 85 AIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVP 136 (291)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 77765432224555655544 24566778888776 79999999664
No 53
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=79.82 E-value=14 Score=38.13 Aligned_cols=143 Identities=12% Similarity=0.006 Sum_probs=86.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-cccC-----CHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-ETLP-----AQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-ETi~-----~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ -|.. +..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 24 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 90 (297)
T 3flu_A 24 SIHYE----QLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG---------ANNTVE 90 (297)
T ss_dssp CBCHH----HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CcCHHH
Confidence 46664 4566777888899998765 3332 567777777776642 4589887542 345667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+. .
T Consensus 91 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~L----a 158 (297)
T 3flu_A 91 AIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGR-----TV---VSMTNDTILRL----A 158 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHH-----HS---SCCCHHHHHHH----T
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCch-----hc---cCCCHHHHHHH----H
Confidence 77765433335566666544 24456777888776 7999999976431 12 14456555443 3
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
+ --||+|= +|| ..+++.++.+..
T Consensus 159 ~-~pnivgiKdssg-d~~~~~~~~~~~ 183 (297)
T 3flu_A 159 E-IPNIVGVKEASG-NIGSNIELINRA 183 (297)
T ss_dssp T-STTEEEEEECSC-CHHHHHHHHHHS
T ss_pred c-CCCEEEEEeCCC-CHHHHHHHHHhc
Confidence 2 2355552 232 466777666543
No 54
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=79.70 E-value=47 Score=34.69 Aligned_cols=137 Identities=15% Similarity=0.200 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEecccCC------------------HHHHHHHHHHHHhcCCCeEEEEEEecCCCcc
Q psy13907 413 TPQELIDYHRPRIEALIQGGIDLLAIETLPA------------------QEEAMVLAELIKEYPGLKAWISFSCKDEKHT 474 (698)
Q Consensus 413 t~del~~~y~~qi~~L~~~GvDlll~ETi~~------------------~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l 474 (698)
-.+.+.++|.++++ +|+.+++.|.+.- ....|...+++++. +-++++.+. ..||.
T Consensus 37 ~~~~~~~~y~~rA~----gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~-g~~i~~QL~--h~Gr~ 109 (338)
T 1z41_A 37 LTPFHMAHYISRAI----GQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQ-GSKIGIQLA--HAGRK 109 (338)
T ss_dssp CCHHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHT-TCEEEEEEE--CCGGG
T ss_pred CCHHHHHHHHHHHc----CCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhc-CCEEEEEec--CCCcc
Confidence 35788888888763 8999999996421 12245666677764 568887775 22221
Q ss_pred C------------------------CCCcHHHHHHHHH----HhCCCCceEEEEcCCC---------hh-----------
Q psy13907 475 C------------------------HGDKFGLIARDVY----AKNPAQLVAVGVNCLA---------PH----------- 506 (698)
Q Consensus 475 ~------------------------~G~~l~~~v~~~~----~~~~~~~~~iGlNC~~---------p~----------- 506 (698)
. +-+.+.+.++.+. ....++.++|-|||.+ |.
T Consensus 110 ~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGs 189 (338)
T 1z41_A 110 AELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGS 189 (338)
T ss_dssp CCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS
T ss_pred cCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcc
Confidence 1 1111222222221 1112678899999843 21
Q ss_pred ------hhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEEe
Q psy13907 507 ------YVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVG 563 (698)
Q Consensus 507 ------~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiG 563 (698)
.+..+++.+. .+.||++.-+..... .+.| +.++..+.++.+.+.|+.+|-
T Consensus 190 lenr~r~~~eiv~avr~~v~~pv~vris~~~~~---~~g~----~~~~~~~~a~~l~~~Gvd~i~ 247 (338)
T 1z41_A 190 PENRYRFLREIIDEVKQVWDGPLFVRVSASDYT---DKGL----DIADHIGFAKWMKEQGVDLID 247 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCS---TTSC----CHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhhHHHHHHHHHHHHHHcCCcEEEEecCcccC---CCCC----CHHHHHHHHHHHHHcCCCEEE
Confidence 1233444443 478998886664322 2334 466778888888888855543
No 55
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=79.60 E-value=14 Score=37.87 Aligned_cols=143 Identities=10% Similarity=-0.001 Sum_probs=87.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccc-CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ETi-~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.+++ +.++..++.+++.|||.|++ |.. -+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 17 ~iD~----~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 83 (289)
T 2yxg_A 17 EVDF----DGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG---------SNCTEE 83 (289)
T ss_dssp EECH----HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSSHHH
T ss_pred CcCH----HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CCCHHH
Confidence 4555 44566778888899999876 432 4566777777766642 3589886552 335666
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+++
T Consensus 84 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La~~-- 153 (289)
T 2yxg_A 84 AIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSR-----TA---VNLEPKTVKLLAEE-- 153 (289)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHH-----HS---CCCCHHHHHHHHHH--
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccc-----cC---cCCCHHHHHHHHHh--
Confidence 76655432234566666654 24566777887776 7899999976531 12 14567666655422
Q ss_pred HcCCeEEe--ecCCCchHHHHHHHhc
Q psy13907 556 DTGVKYVG--GCCRTNADDMKNVNQV 579 (698)
Q Consensus 556 ~~G~~iiG--GCCGTtP~hI~al~~~ 579 (698)
--||+| =+|| ...++..+.+.
T Consensus 154 --~pnivgiK~s~g-d~~~~~~~~~~ 176 (289)
T 2yxg_A 154 --YSNISAVKEANP-NLSQVSELIHD 176 (289)
T ss_dssp --CTTEEEEEECCS-CTHHHHHHHHH
T ss_pred --CCCEEEEEeCCC-CHHHHHHHHHh
Confidence 245665 2333 35667666654
No 56
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=79.05 E-value=9.3 Score=37.76 Aligned_cols=139 Identities=16% Similarity=0.169 Sum_probs=74.7
Q ss_pred HHHHHHHHhCCCCEEEeccc-----CCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCce
Q psy13907 422 RPRIEALIQGGIDLLAIETL-----PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLV 496 (698)
Q Consensus 422 ~~qi~~L~~~GvDlll~ETi-----~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~ 496 (698)
.+.++.+.++|+|.|-+=++ +.... ..+..+++..++|+++..-+. +..+ ++.+.+ .+.+
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~ipv~v~ggI~---------~~~~-~~~~l~---~Gad 99 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAMDIKVELSGGIR---------DDDT-LAAALA---TGCT 99 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHCSSEEEEESSCC---------SHHH-HHHHHH---TTCS
T ss_pred HHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhcCCcEEEECCcC---------CHHH-HHHHHH---cCCC
Confidence 45567778899999976432 22222 445555555689998865443 2444 444433 2344
Q ss_pred EEEEcC---CChhhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEEe-------e-c
Q psy13907 497 AVGVNC---LAPHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVG-------G-C 565 (698)
Q Consensus 497 ~iGlNC---~~p~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiG-------G-C 565 (698)
.|.+.- ..|+.+..+++.++...-+++-+..|... ..| |. ..+. ...+.++++.+.|+..|. | -
T Consensus 100 ~V~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~--~~g-~~-~~~~-~~~e~~~~~~~~G~~~i~~~~~~~~~~~ 174 (244)
T 1vzw_A 100 RVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLR--GRG-WT-RDGG-DLYETLDRLNKEGCARYVVTDIAKDGTL 174 (244)
T ss_dssp EEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEEC--CSS-SC-CCCC-BHHHHHHHHHHTTCCCEEEEEC------
T ss_pred EEEECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEE--EcC-cc-cCCC-CHHHHHHHHHhCCCCEEEEeccCccccc
Confidence 444443 46777777777765333344544444222 233 63 1222 444555666667755332 1 2
Q ss_pred CCCchHHHHHHHhcc
Q psy13907 566 CRTNADDMKNVNQVP 580 (698)
Q Consensus 566 CGTtP~hI~al~~~v 580 (698)
-|...+.++.+++.+
T Consensus 175 ~g~~~~~~~~i~~~~ 189 (244)
T 1vzw_A 175 QGPNLELLKNVCAAT 189 (244)
T ss_dssp -CCCHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHhc
Confidence 345667788777654
No 57
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=78.82 E-value=13 Score=38.57 Aligned_cols=144 Identities=13% Similarity=0.027 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-ccc-----CCHHHHHHHHHHHHhc--C-CCeEEEEEEecCCCccCCCCcHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-ETL-----PAQEEAMVLAELIKEY--P-GLKAWISFSCKDEKHTCHGDKFG 481 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-ETi-----~~~~Eakaa~~a~~~~--~-~~Pv~iS~t~~~~g~l~~G~~l~ 481 (698)
.+++ +.++..++.+++.|||.|++ -|. -+..|-+.+++.+.+. . +.||++.. .+.+..
T Consensus 24 ~iD~----~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~ 90 (301)
T 3m5v_A 24 KVDE----QSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATH 90 (301)
T ss_dssp EECH----HHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHH
T ss_pred CCCH----HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHH
Confidence 4566 44566777888899999876 222 2466777777776643 3 57988754 234567
Q ss_pred HHHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHH
Q psy13907 482 LIARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRW 554 (698)
Q Consensus 482 ~~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~ 554 (698)
++++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 91 ~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La--- 159 (301)
T 3m5v_A 91 EAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGR-----TG---CEISTDTIIKLF--- 159 (301)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHH-----HS---CCCCHHHHHHHH---
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchh-----hC---cCCCHHHHHHHH---
Confidence 777766543335666766655 24566778888776 7999999965431 12 245676665544
Q ss_pred HHcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 555 LDTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 555 ~~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
+.--||+|= +|| +..++.++.+..
T Consensus 160 -~~~pnivgiKdssg-d~~~~~~~~~~~ 185 (301)
T 3m5v_A 160 -RDCENIYGVKEASG-NIDKCVDLLAHE 185 (301)
T ss_dssp -HHCTTEEEEEECSS-CHHHHHHHHHHC
T ss_pred -hcCCCEEEEEeCCC-CHHHHHHHHHhC
Confidence 332345542 333 467777776554
No 58
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=78.74 E-value=15 Score=38.01 Aligned_cols=144 Identities=10% Similarity=0.038 Sum_probs=88.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.+++ +.++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 29 ~iD~----~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg---------~~st~~ 95 (306)
T 1o5k_A 29 ELDL----ESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG---------TNSTEK 95 (306)
T ss_dssp EECH----HHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSCHHH
T ss_pred CcCH----HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC---------CccHHH
Confidence 4555 44567778888899999876 43 34566777777776642 3589886552 335667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.++
T Consensus 96 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La~--- 164 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGR-----TG---VNVLPETAARIAA--- 164 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHH-----HS---CCCCHHHHHHHHH---
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccc-----cC---cCCCHHHHHHHHH---
Confidence 77655432224556666644 24566778887775 6899999976531 12 1456766665542
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
+ --||+|= +|| +..++.++.+..
T Consensus 165 ~-~pnIvgiKdssg-d~~~~~~~~~~~ 189 (306)
T 1o5k_A 165 D-LKNVVGIXEANP-DIDQIDRTVSLT 189 (306)
T ss_dssp H-CTTEEEEEECCC-CHHHHHHHHHHH
T ss_pred h-CCCEEEEeCCCC-CHHHHHHHHHhc
Confidence 2 2456662 443 356777666554
No 59
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=78.66 E-value=14 Score=38.00 Aligned_cols=142 Identities=8% Similarity=0.030 Sum_probs=85.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHHH
Q psy13907 412 TTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGLI 483 (698)
Q Consensus 412 ~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~~ 483 (698)
+++ +.++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++... +.+..++
T Consensus 19 iD~----~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg---------~~~t~~a 85 (291)
T 3a5f_A 19 VDF----DKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG---------SNNTAAS 85 (291)
T ss_dssp BCH----HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHHH
T ss_pred cCH----HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------cccHHHH
Confidence 565 44566778888899999876 43 34566777777766642 3589886552 3456677
Q ss_pred HHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHH
Q psy13907 484 ARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLD 556 (698)
Q Consensus 484 v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~ 556 (698)
++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+ +
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La----~ 153 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGR-----TG---LNITPGTLKELC----E 153 (291)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHH-----HS---CCCCHHHHHHHT----T
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccc-----cC---CCCCHHHHHHHH----c
Confidence 7665433335667776655 24456777777765 7899999976531 12 144565555443 2
Q ss_pred cCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 557 TGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 557 ~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
. -||+|= +|| ...++.++.+..
T Consensus 154 ~-pnivgiK~s~g-d~~~~~~~~~~~ 177 (291)
T 3a5f_A 154 D-KNIVAVXEASG-NISQIAQIKALC 177 (291)
T ss_dssp S-TTEEEEEECSC-CHHHHHHHHHHH
T ss_pred C-CCEEEEeCCCC-CHHHHHHHHHhc
Confidence 2 456652 333 356666665543
No 60
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=78.59 E-value=14 Score=38.43 Aligned_cols=144 Identities=18% Similarity=0.094 Sum_probs=87.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccc-CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ETi-~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ |.. -+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 41 ~iD~~----~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg---------~~~t~~ 107 (315)
T 3na8_A 41 GLDLP----ALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS---------DLTTAK 107 (315)
T ss_dssp SBCHH----HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 46664 4567777888899998764 322 2467777777777652 3589887542 345667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+++++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+.
T Consensus 108 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~L~a--- 176 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGT-----SG---IDMSVELILRIVR--- 176 (315)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHH-----HS---CCCCHHHHHHHHH---
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcch-----hC---cCCCHHHHHHHHh---
Confidence 77766443335667777765 24566778888776 7899999976431 12 1455655544322
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
+. -||+|= +|| ...++.++.+..
T Consensus 177 ~~-pnIvgiKdssg-d~~~~~~~~~~~ 201 (315)
T 3na8_A 177 EV-DNVTMVKESTG-DIQRMHKLRLLG 201 (315)
T ss_dssp HS-TTEEEEEECSS-CHHHHHHHHHHT
T ss_pred cC-CCEEEEECCCC-CHHHHHHHHHHc
Confidence 22 355552 222 456776666543
No 61
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=78.57 E-value=24 Score=36.33 Aligned_cols=161 Identities=16% Similarity=0.171 Sum_probs=87.3
Q ss_pred CeEEEEecCCcCCCCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEecC---cC------HHHHHHHHHHH
Q psy13907 46 HVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETL---PA------QEEAMVLAELI 116 (698)
Q Consensus 46 ~v~VAGSIGP~g~~l~~gseY~g~y~~~~s~eel~~~~~~qi~~l~~~GVD~il~ETi---~~------l~Ea~aa~~a~ 116 (698)
+.+|.|=|=+++...++|. .| .+.+++ ..+++.+++.|+|+|=+=-- |. .+|++.++.++
T Consensus 14 ~~~imGilN~TpdSFsdgg----~~---~~~~~a----~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGG----TH---NSLIDA----VKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCC----CC---THHHHH----HHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccc----cc---CCHHHH----HHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 4578888877776555542 12 233433 34667777889999866543 33 78887776666
Q ss_pred Hhc---CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhccccccccccccc
Q psy13907 117 KEY---PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLI 193 (698)
Q Consensus 117 ~~~---~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~ 193 (698)
+.. .++|+ |+ + =...+.+-+.+. .|++. ||=.+ +.
T Consensus 83 ~~l~~~~~~pi--SI--D-------T~~~~va~aAl~----aGa~i--INdvs------------------------g~- 120 (282)
T 1aj0_A 83 EAIAQRFEVWI--SV--D-------TSKPEVIRESAK----VGAHI--INDIR------------------------SL- 120 (282)
T ss_dssp HHHHHHCCCEE--EE--E-------CCCHHHHHHHHH----TTCCE--EEETT------------------------TT-
T ss_pred HHHHhhcCCeE--EE--e-------CCCHHHHHHHHH----cCCCE--EEECC------------------------CC-
Confidence 543 35554 44 2 112322222332 24443 44433 00
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCcCCCcCccEEeecCCCCceeecCeeeeeeeccchhhhccccchhhhhHHHHHHHHh
Q psy13907 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFIL 273 (698)
Q Consensus 194 ~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~pnag~p~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 273 (698)
.-| .|++++++ + +.|+.++++.|.|+..+.+. .|..--++.. ++|.+-. +.+.
T Consensus 121 -~d~-~~~~~~a~---~------------~~~vVlmh~~G~p~tm~~~~---~y~d~~~ev~---~~l~~~i----~~a~ 173 (282)
T 1aj0_A 121 -SEP-GALEAAAE---T------------GLPVCLMHMQGNPKTMQEAP---KYDDVFAEVN---RYFIEQI----ARCE 173 (282)
T ss_dssp -CST-THHHHHHH---H------------TCCEEEECCSSCTTCCSCCC---CCSCHHHHHH---HHHHHHH----HHHH
T ss_pred -CCH-HHHHHHHH---h------------CCeEEEEccCCCCccccccC---ccchHHHHHH---HHHHHHH----HHHH
Confidence 022 56676554 3 78999999999998765544 2542222222 2333322 2233
Q ss_pred hCc----eEEEeccccc
Q psy13907 274 ENK----LYLIDGGFSS 286 (698)
Q Consensus 274 ~~~----~~i~dG~~gt 286 (698)
+.+ -+|+|=|+|+
T Consensus 174 ~~Gi~~~~IilDPg~gf 190 (282)
T 1aj0_A 174 QAGIAKEKLLLDPGFGF 190 (282)
T ss_dssp HTTCCGGGEEEECCTTS
T ss_pred HcCCChhhEEEeCCCCc
Confidence 444 3799987664
No 62
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=78.04 E-value=17 Score=38.28 Aligned_cols=142 Identities=11% Similarity=-0.040 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 51 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------~~st~e 117 (332)
T 2r8w_A 51 RVDIE----AFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG---------ALRTDE 117 (332)
T ss_dssp CBCHH----HHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 46664 4556677788899999876 43 34566777777776643 3589887653 334666
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+++++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 118 ai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~-----tg---~~l~~e~~~~La---- 185 (332)
T 2r8w_A 118 AVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTT-----TR---FTFSDELLVRLA---- 185 (332)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHH-----HC---CCCCHHHHHHHH----
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccc-----cC---cCCCHHHHHHHH----
Confidence 76655432234566666655 24566777777776 7899999976531 12 145666665543
Q ss_pred HcCCeEEee--cCCCc---hHHHHHHHh
Q psy13907 556 DTGVKYVGG--CCRTN---ADDMKNVNQ 578 (698)
Q Consensus 556 ~~G~~iiGG--CCGTt---P~hI~al~~ 578 (698)
+ --||+|= +||-. .+++..+.+
T Consensus 186 ~-~pnIvgiKdssgd~~~~~~~~~~l~~ 212 (332)
T 2r8w_A 186 Y-IPNIRAIKMPLPADADYAGELARLRP 212 (332)
T ss_dssp T-STTEEEEEECCCTTCCHHHHHHHHTT
T ss_pred c-CCCEEEEEeCCCCchhHHHHHHHHHH
Confidence 2 2456662 44432 455555543
No 63
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=77.78 E-value=2.2 Score=44.83 Aligned_cols=45 Identities=11% Similarity=0.003 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy13907 81 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFS 129 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft 129 (698)
+.-.+|++++.++|+|.|++|.+++.+|++.+.+.+ ++|+.+.++
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l----~~P~lan~~ 233 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADATFVEAPANVDELKEVSAKT----KGLRIANMI 233 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS----CSEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc----CCCEEEEec
Confidence 345568899999999999999999999998887764 479887654
No 64
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=77.67 E-value=2.2 Score=44.82 Aligned_cols=45 Identities=11% Similarity=0.003 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy13907 419 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFS 467 (698)
Q Consensus 419 ~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t 467 (698)
+.-.++++++.++|+|+|++|.+++..+++.+.+.+ +.|+++..+
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l----~~P~lan~~ 233 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADATFVEAPANVDELKEVSAKT----KGLRIANMI 233 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS----CSEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc----CCCEEEEec
Confidence 445678999999999999999999999999887766 379876553
No 65
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=77.12 E-value=2.1 Score=44.67 Aligned_cols=44 Identities=16% Similarity=0.249 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy13907 82 YHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFS 129 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft 129 (698)
.-.+|++++.++|+|.|.+|.+++.+|++.+.+.+. .|+++.++
T Consensus 172 eai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~----~Pl~~n~~ 215 (298)
T 3eoo_A 172 AAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK----VPILANLT 215 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC----SCBEEECC
T ss_pred HHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC----CCeEEEec
Confidence 344689999999999999999999999998888763 79888775
No 66
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=76.89 E-value=7.3 Score=40.59 Aligned_cols=133 Identities=15% Similarity=0.186 Sum_probs=80.6
Q ss_pred HHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCCcCCCCCCC
Q psy13907 322 RDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDG 401 (698)
Q Consensus 322 ~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP~~~~l~~~ 401 (698)
+.-+++|+|+|.... .+|.......++++.+++.+.....++.||+. + ..|-+.+.-. + +
T Consensus 88 ~~a~~~g~~~v~i~~-~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~------------G--~~v~~~i~~~---~--~ 147 (307)
T 1ydo_A 88 ENALEGGINEACVFM-SASETHNRKNINKSTSESLHILKQVNNDAQKA------------N--LTTRAYLSTV---F--G 147 (307)
T ss_dssp HHHHHHTCSEEEEEE-ESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHT------------T--CEEEEEEECT---T--C
T ss_pred HHHHhCCcCEEEEEe-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC------------C--CEEEEEEEEE---e--c
Confidence 345678999887653 45655444446777777666666666666553 1 2233333221 1 1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-c--cCCHHHHHHHHHHHHhcC-CCeEEEEEEecCCCccCCC
Q psy13907 402 SEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE-T--LPAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHG 477 (698)
Q Consensus 402 ~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~E-T--i~~~~Eakaa~~a~~~~~-~~Pv~iS~t~~~~g~l~~G 477 (698)
-||.| ..+.+ ++.+.++.+.+.|+|.|.+= | +....+....+.++++.. +.| +++-+.+ -.|
T Consensus 148 ~~~~~----~~~~~----~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~--l~~H~Hn----d~G 213 (307)
T 1ydo_A 148 CPYEK----DVPIE----QVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQ--IALHFHD----TRG 213 (307)
T ss_dssp BTTTB----CCCHH----HHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGG--EEEECBG----GGS
T ss_pred CCcCC----CCCHH----HHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEEECC----CCc
Confidence 12223 23454 55666677888899987553 3 346778888888888632 344 5777766 567
Q ss_pred CcHHHHHHHHH
Q psy13907 478 DKFGLIARDVY 488 (698)
Q Consensus 478 ~~l~~~v~~~~ 488 (698)
..+..++.++.
T Consensus 214 la~AN~laAv~ 224 (307)
T 1ydo_A 214 TALANMVTALQ 224 (307)
T ss_dssp CHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 77777777774
No 67
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=76.85 E-value=8.2 Score=41.02 Aligned_cols=146 Identities=14% Similarity=0.176 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEE
Q psy13907 419 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 498 (698)
Q Consensus 419 ~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~i 498 (698)
+.-..|++.|.++|+|++=+ |+|+..++ .++..+++..++|++.-+.++. . -+.+++. .+++.+
T Consensus 46 ~atv~Qi~~l~~aG~diVRv-avp~~~~a-~al~~I~~~~~vPlvaDiHf~~-------~---lal~a~e----~G~dkl 109 (366)
T 3noy_A 46 EATLNQIKRLYEAGCEIVRV-AVPHKEDV-EALEEIVKKSPMPVIADIHFAP-------S---YAFLSME----KGVHGI 109 (366)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-ECCSHHHH-HHHHHHHHHCSSCEEEECCSCH-------H---HHHHHHH----TTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEe-CCCChHHH-HHHHHHHhcCCCCEEEeCCCCH-------H---HHHHHHH----hCCCeE
Confidence 45568999999999999988 89996665 4555666556899987766532 1 2233331 345667
Q ss_pred EEcC---CChhhhHHHHHHhc-CCCCEEEecCCCCC-cCCCCcccccCCChhhHHHHHHHHH----HcC-CeEEeecCCC
Q psy13907 499 GVNC---LAPHYVESLLTSAG-RDVPLLCCPNSGET-FDPGQRIWMNKDSVPSVDTYVPRWL----DTG-VKYVGGCCRT 568 (698)
Q Consensus 499 GlNC---~~p~~~~~~l~~l~-~~~pl~~yPNaG~~-~d~~~g~~~~~~~p~~~a~~~~~~~----~~G-~~iiGGCCGT 568 (698)
=+|= ...+.++.+++... ..+|+-+=-|+|.. .+... .| ...+|+.|.+.+.+++ +.| =+|+=-|=..
T Consensus 110 RINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~-~y-g~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S 187 (366)
T 3noy_A 110 RINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLE-KY-GYPSAEALAESALRWSEKFEKWGFTNYKVSIKGS 187 (366)
T ss_dssp EECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHH-HH-SSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECS
T ss_pred EECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHH-hc-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecC
Confidence 7776 34566777777776 78898888899843 21111 13 1357888877665554 457 4666545444
Q ss_pred ch-HHHHHHHhcccc
Q psy13907 569 NA-DDMKNVNQVPVK 582 (698)
Q Consensus 569 tP-~hI~al~~~v~~ 582 (698)
.+ .-|++-+...+.
T Consensus 188 ~v~~~i~ayr~la~~ 202 (366)
T 3noy_A 188 DVLQNVRANLIFAER 202 (366)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhc
Confidence 44 456665555443
No 68
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=76.77 E-value=20 Score=37.37 Aligned_cols=101 Identities=14% Similarity=0.013 Sum_probs=67.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++... + +..+
T Consensus 29 ~iD~~----~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg---------~-st~~ 94 (314)
T 3d0c_A 29 EIDWK----GLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG---------Y-SVDT 94 (314)
T ss_dssp CBCHH----HHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC---------S-SHHH
T ss_pred CCCHH----HHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC---------c-CHHH
Confidence 46664 4566777788899999875 32 34566777777766642 3589887652 3 5667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEec
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCP 525 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yP 525 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-
T Consensus 95 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 77666433335667777655 24566777777776 789999997
No 69
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=76.69 E-value=16 Score=37.80 Aligned_cols=142 Identities=11% Similarity=0.019 Sum_probs=86.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.+++ +.++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 17 ~iD~----~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ 83 (297)
T 2rfg_A 17 QVDE----KALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG---------SNNPVE 83 (297)
T ss_dssp EECH----HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHH
T ss_pred CcCH----HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC---------CCCHHH
Confidence 4566 44566778888899999875 43 34566777777766642 3589886552 345667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 84 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La---- 151 (297)
T 2rfg_A 84 AVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPR-----AV---VDIKPETMARLA---- 151 (297)
T ss_dssp HHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHH-----HS---CCCCHHHHHHHH----
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccc-----cC---CCCCHHHHHHHH----
Confidence 77665433234666776655 24566777777776 7899999976531 12 145666665543
Q ss_pred HcCCeEEe--ecCCCchHHHHHHHhc
Q psy13907 556 DTGVKYVG--GCCRTNADDMKNVNQV 579 (698)
Q Consensus 556 ~~G~~iiG--GCCGTtP~hI~al~~~ 579 (698)
+ --||+| =+|| ...++..+.+.
T Consensus 152 ~-~pnIvgiKds~g-d~~~~~~~~~~ 175 (297)
T 2rfg_A 152 A-LPRIVGVKDATT-DLARISRERML 175 (297)
T ss_dssp T-STTEEEEEECSC-CTTHHHHHHTT
T ss_pred c-CCCEEEEEeCCC-CHHHHHHHHHh
Confidence 2 245666 2343 34566655543
No 70
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=76.62 E-value=25 Score=36.16 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=31.0
Q ss_pred CccEEeecCCCCceeecCe-eeeeeeccchhhhccccchhhhhHHHHHHHHhhCce----EEEecccc
Q psy13907 223 EAPLKAKPNRSLFETYHGV-FVNVQYNLKCELKRSHFNILSKDLQKINEFILENKL----YLIDGGFS 285 (698)
Q Consensus 223 ~~~~~~~pnag~p~~~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~----~i~dG~~g 285 (698)
+.|+.++++.|.|+..+.+ . .|..-.++.. ++|.+-. +.+.+.++ +|+|=|+|
T Consensus 124 ~~~vVlmh~~G~p~tm~~~~~---~y~dv~~~v~---~~l~~~i----~~a~~~Gi~~~~IilDPg~G 181 (280)
T 1eye_A 124 DVPWVLMHWRAVSADTPHVPV---RYGNVVAEVR---ADLLASV----ADAVAAGVDPARLVLDPGLG 181 (280)
T ss_dssp TCCEEEECCCCSCTTCTTSCC---CCSSHHHHHH---HHHHHHH----HHHHHTTCCGGGEEEECCTT
T ss_pred CCeEEEEcCCCCCcchhhcCc---chhHHHHHHH---HHHHHHH----HHHHHcCCChhhEEEECCCC
Confidence 7899999999999876544 2 2543222222 1333322 22334443 79998876
No 71
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=76.28 E-value=67 Score=32.89 Aligned_cols=171 Identities=13% Similarity=0.132 Sum_probs=96.1
Q ss_pred CcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccc---CC------HHHHHHHHHHH
Q psy13907 384 HVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETL---PA------QEEAMVLAELI 454 (698)
Q Consensus 384 ~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi---~~------~~Eakaa~~a~ 454 (698)
+..|-|-|=+|..|+++|.. | .+.+++ .++++.+++.|+|+|=+-.- |. -.|.+..+.++
T Consensus 14 ~~~imGilN~TpdSFsdgg~----~---~~~~~a----~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGT----H---NSLIDA----VKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCC----C---THHHHH----HHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccccc----c---CCHHHH----HHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 45799999999999988632 2 344444 45667778899999855432 33 67777666655
Q ss_pred Hh---cCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcCCChhhhHHHHHHhcCCCCEEEecCCCCCc
Q psy13907 455 KE---YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAGRDVPLLCCPNSGETF 531 (698)
Q Consensus 455 ~~---~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~~~~pl~~yPNaG~~~ 531 (698)
+. ..+.|+ |+-..+ .+++++..+. + ....--++...-..|.+++++. +.|+++.++.|.|.
T Consensus 83 ~~l~~~~~~pi--SIDT~~----------~~va~aAl~a-G-a~iINdvsg~~d~~~~~~~a~~--~~~vVlmh~~G~p~ 146 (282)
T 1aj0_A 83 EAIAQRFEVWI--SVDTSK----------PEVIRESAKV-G-AHIINDIRSLSEPGALEAAAET--GLPVCLMHMQGNPK 146 (282)
T ss_dssp HHHHHHCCCEE--EEECCC----------HHHHHHHHHT-T-CCEEEETTTTCSTTHHHHHHHH--TCCEEEECCSSCTT
T ss_pred HHHHhhcCCeE--EEeCCC----------HHHHHHHHHc-C-CCEEEECCCCCCHHHHHHHHHh--CCeEEEEccCCCCc
Confidence 53 235564 552211 1344444332 2 2231223322234566666655 68999999988765
Q ss_pred CCCCcccccCCC----hhhHHHHHHHHHHcCCe---EE---e-ecCCCchHHHHHHHhccccC
Q psy13907 532 DPGQRIWMNKDS----VPSVDTYVPRWLDTGVK---YV---G-GCCRTNADDMKNVNQVPVKF 583 (698)
Q Consensus 532 d~~~g~~~~~~~----p~~~a~~~~~~~~~G~~---ii---G-GCCGTtP~hI~al~~~v~~~ 583 (698)
+.... -.|+.- -+.+.+.+....+.|+. |+ | |- |.+.+|--.+-+.++..
T Consensus 147 tm~~~-~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf-~k~~~~n~~ll~~l~~~ 207 (282)
T 1aj0_A 147 TMQEA-PKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGF-GKNLSHNYSLLARLAEF 207 (282)
T ss_dssp CCSCC-CCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS-SCCHHHHHHHHHTGGGG
T ss_pred ccccc-CccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCc-ccCHHHHHHHHHHHHHH
Confidence 32211 011111 12344555666778975 54 2 22 66788766666666544
No 72
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=76.10 E-value=45 Score=33.32 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=70.1
Q ss_pred HHHHHHHhCCCCEE---EecccCCHH----HHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHH---HHHHHHHHhCC
Q psy13907 423 PRIEALIQGGIDLL---AIETLPAQE----EAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFG---LIARDVYAKNP 492 (698)
Q Consensus 423 ~qi~~L~~~GvDll---l~ETi~~~~----Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~---~~v~~~~~~~~ 492 (698)
++++..++.|+|.+ +..--.+.. +++.++++++++ +.|+++-.. .+...+.+|.+.. ++++...+
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~-g~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~~--- 177 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYW-GMPLIAMMY-PRGKHIQNERDPELVAHAARLGAE--- 177 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHH-TCCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHc-CCCEEEEeC-CCCcccCCCCCHhHHHHHHHHHHH---
Confidence 45666777899998 555544443 456667777764 788877532 2333444454443 33343332
Q ss_pred CCceEEEEcC-CChhhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCe
Q psy13907 493 AQLVAVGVNC-LAPHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVK 560 (698)
Q Consensus 493 ~~~~~iGlNC-~~p~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~ 560 (698)
.+++.|+++= .+++.+..+.+.. +.|+++. +|.. ..+++++.+.++++++.|+.
T Consensus 178 ~Gad~i~~~~~~~~~~l~~i~~~~--~ipvva~--GGi~----------~~~~~~~~~~~~~~~~~Ga~ 232 (273)
T 2qjg_A 178 LGADIVKTSYTGDIDSFRDVVKGC--PAPVVVA--GGPK----------TNTDEEFLQMIKDAMEAGAA 232 (273)
T ss_dssp TTCSEEEECCCSSHHHHHHHHHHC--SSCEEEE--CCSC----------CSSHHHHHHHHHHHHHHTCS
T ss_pred cCCCEEEECCCCCHHHHHHHHHhC--CCCEEEE--eCCC----------CCCHHHHHHHHHHHHHcCCc
Confidence 5567788774 5656555554443 5787663 3321 12356777778888888865
No 73
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=75.93 E-value=17 Score=37.58 Aligned_cols=142 Identities=14% Similarity=0.039 Sum_probs=86.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 28 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg---------~~~t~~ 94 (303)
T 2wkj_A 28 ALDKA----SLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG---------CVSTAE 94 (303)
T ss_dssp SBCHH----HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 46664 4566777888899999876 43 34566777777766642 3589887542 335667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CC-CCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RD-VPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRW 554 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~-~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~ 554 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+ .|+++|-+-+ ..| .+.+++.+.+.+
T Consensus 95 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~-----~tg---~~l~~~~~~~La--- 163 (303)
T 2wkj_A 95 SQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPA-----LSG---VKLTLDQINTLV--- 163 (303)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHH-----HHC---CCCCHHHHHHHH---
T ss_pred HHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCcc-----ccC---CCCCHHHHHHHh---
Confidence 77655432234566666654 24566777877776 56 9999997643 112 145666665543
Q ss_pred HHcCCeEEee--cCCCchHHHHHHHhc
Q psy13907 555 LDTGVKYVGG--CCRTNADDMKNVNQV 579 (698)
Q Consensus 555 ~~~G~~iiGG--CCGTtP~hI~al~~~ 579 (698)
+ --||+|= +|| ...++.++.+.
T Consensus 164 -~-~pnIvgiK~s~g-d~~~~~~~~~~ 187 (303)
T 2wkj_A 164 -T-LPGVGALXQTSG-DLYQMEQIRRE 187 (303)
T ss_dssp -T-STTEEEEEECCC-CHHHHHHHHHH
T ss_pred -c-CCCEEEEeCCCC-CHHHHHHHHHh
Confidence 2 2456662 343 35666666543
No 74
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=75.92 E-value=34 Score=37.25 Aligned_cols=135 Identities=12% Similarity=0.090 Sum_probs=88.2
Q ss_pred HHHHHHHHHhCCCCEEEecccC---------------CHHHHHHHHHHHHhc---CCCeEEEEEEecCCC----------
Q psy13907 421 HRPRIEALIQGGIDLLAIETLP---------------AQEEAMVLAELIKEY---PGLKAWISFSCKDEK---------- 472 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi~---------------~~~Eakaa~~a~~~~---~~~Pv~iS~t~~~~g---------- 472 (698)
-.+.++.|+++||-.+-+|-.- ++.|...=+.|++.. .+.+++|-.-.+...
T Consensus 165 v~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~ 244 (429)
T 1f8m_A 165 VYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDE 244 (429)
T ss_dssp HHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCST
T ss_pred HHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccccc
Confidence 3466888999999999999653 355655545554421 356666665543321
Q ss_pred ---------ccCC-----CCcHHHHHHHHHHhCCCCceEEEEc-C-CChhhhHHHHHHhcCCCC--EEEecCCCCCcCCC
Q psy13907 473 ---------HTCH-----GDKFGLIARDVYAKNPAQLVAVGVN-C-LAPHYVESLLTSAGRDVP--LLCCPNSGETFDPG 534 (698)
Q Consensus 473 ---------~l~~-----G~~l~~~v~~~~~~~~~~~~~iGlN-C-~~p~~~~~~l~~l~~~~p--l~~yPNaG~~~d~~ 534 (698)
+... ...+.++++....... +.+.|=+- + ..+++++.+.+.+....| +++|+.... +
T Consensus 245 ~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~~~P~~~La~n~sPs-f--- 319 (429)
T 1f8m_A 245 RDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPS-F--- 319 (429)
T ss_dssp TTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCTT-S---
T ss_pred cccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcccCCCceeecCCCCC-C---
Confidence 1111 2458899888754333 56777775 4 478889999998874345 678876521 1
Q ss_pred CcccccCCChhhHHHHHHHHHHcCCeEE
Q psy13907 535 QRIWMNKDSVPSVDTYVPRWLDTGVKYV 562 (698)
Q Consensus 535 ~g~~~~~~~p~~~a~~~~~~~~~G~~ii 562 (698)
. |....+++++..+.+++.+.|++++
T Consensus 320 -~-w~~~~~~~~~~~f~~eL~~lG~~~v 345 (429)
T 1f8m_A 320 -N-WKKHLDDATIAKFQKELAAMGFKFQ 345 (429)
T ss_dssp -C-HHHHCCHHHHHHHHHHHHHHTEEEE
T ss_pred -C-cccccchhhHhHHHHHHHHcCCeEE
Confidence 1 5434678899999999999996543
No 75
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=75.91 E-value=18 Score=37.74 Aligned_cols=143 Identities=9% Similarity=-0.012 Sum_probs=86.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-cc-----cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-ET-----LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-ET-----i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ -| .-+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 40 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg---------~~st~e 106 (314)
T 3qze_A 40 RLDWD----SLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG---------ANSTRE 106 (314)
T ss_dssp CBCHH----HHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CcCHHH
Confidence 46664 4566777788899998766 22 22566777777766642 3579887542 345667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 107 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La---- 174 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGR-----TS---CDMLPETVERLS---- 174 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHH-----HS---CCCCHHHHHHHH----
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccc-----cC---CCCCHHHHHHHh----
Confidence 77766433335566666554 24566778888776 7999999976431 12 145666655443
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
+ --||+|= +|| ..+++.++.+..
T Consensus 175 ~-~pnIvgiKdssg-d~~~~~~~~~~~ 199 (314)
T 3qze_A 175 K-VPNIIGIKEATG-DLQRAKEVIERV 199 (314)
T ss_dssp T-STTEEEEEECSC-CHHHHHHHHHHS
T ss_pred c-CCCEEEEEcCCC-CHHHHHHHHHHc
Confidence 2 2355552 333 456666665443
No 76
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=75.89 E-value=2.1 Score=44.50 Aligned_cols=46 Identities=15% Similarity=0.091 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhCCCCEEEEec-CcCHHHHHHHHHHHHhcCCCeEEEEE
Q psy13907 81 DYHRPRIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYPGLKAWISF 128 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~ET-i~~l~Ea~aa~~a~~~~~~~Pv~iSf 128 (698)
+.-.++++++.++|+|.|++|+ +++.+|++.+.+.++. .+|+++..
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~~P~i~~~ 216 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN--QGPVVIVP 216 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT--CSCEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC--CCCEEEeC
Confidence 3445589999999999999998 8999999999888763 47987654
No 77
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=75.82 E-value=16 Score=38.64 Aligned_cols=144 Identities=13% Similarity=0.078 Sum_probs=88.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 48 ~ID~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg---------~~st~e 114 (343)
T 2v9d_A 48 QLDKP----GTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG---------GTNARE 114 (343)
T ss_dssp SBCHH----HHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------SSCHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC---------CCCHHH
Confidence 46664 4566777888899998876 42 24566777777776642 3589886552 345667
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.++
T Consensus 115 ai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~-----tg---~~l~~e~~~~La~--- 183 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPAL-----TG---QDLTPALVKTLAD--- 183 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHH-----HS---SCCCHHHHHHHHH---
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchh-----cC---cCCCHHHHHHHHH---
Confidence 77665432234566666655 24566777887776 7899999976531 12 1456666665542
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
+ --||+|= +|| ...++..+.+.+
T Consensus 184 ~-~pnIvgiKdssg-d~~~~~~l~~~~ 208 (343)
T 2v9d_A 184 S-RSNIIGIKDTID-SVAHLRSMIHTV 208 (343)
T ss_dssp H-CTTEEEEEECCS-CHHHHHHHHHHH
T ss_pred h-CCCEEEEEeCCC-CHHHHHHHHHhc
Confidence 2 2456652 333 356666666544
No 78
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=75.80 E-value=2.3 Score=44.26 Aligned_cols=46 Identities=20% Similarity=0.302 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy13907 418 IDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFS 467 (698)
Q Consensus 418 ~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t 467 (698)
.+.--++++++.++|+|+|++|.+.+..|++.+.+++. .|+++..+
T Consensus 170 ldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~----~Pl~~n~~ 215 (298)
T 3eoo_A 170 IDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK----VPILANLT 215 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC----SCBEEECC
T ss_pred HHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC----CCeEEEec
Confidence 34456889999999999999999999999999888874 78877664
No 79
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=75.78 E-value=25 Score=36.20 Aligned_cols=144 Identities=9% Similarity=-0.071 Sum_probs=88.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhcC--CCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEYP--GLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~~--~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++.+.+.. +.||++... +.+..+
T Consensus 20 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg---------~~~t~~ 86 (294)
T 3b4u_A 20 TVDID----AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL---------VDSIED 86 (294)
T ss_dssp SBCHH----HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CccHHH
Confidence 46664 4566777788899999876 42 345667777887777542 479886653 335667
Q ss_pred HHHHHHHhCCCCceEEEEcC---C---ChhhhHHHHHHhc--C---CCCEEEecCCCCCcCCCCcccccCCChhhHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC---L---APHYVESLLTSAG--R---DVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYV 551 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC---~---~p~~~~~~l~~l~--~---~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~ 551 (698)
+++........+.+++.+-. . ..+.+..+.+.+. . +.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 87 ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~-----tg---~~l~~~~~~~La 158 (294)
T 3b4u_A 87 AADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSV-----TM---VTLSVELVGRLK 158 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHH-----HS---CCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcch-----hC---cCCCHHHHHHHH
Confidence 77665433335667777655 1 3355777777765 5 899999976431 12 145666665554
Q ss_pred HHHHHcCCe-EEee--cCCCchHHHHHHHhcc
Q psy13907 552 PRWLDTGVK-YVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 552 ~~~~~~G~~-iiGG--CCGTtP~hI~al~~~v 580 (698)
++ --| |+|= +|| ...++..+.+..
T Consensus 159 ~~----~pn~ivgiKds~g-d~~~~~~~~~~~ 185 (294)
T 3b4u_A 159 AA----FPGIVTGVKDSSG-NWSHTERLLKEH 185 (294)
T ss_dssp HH----CTTTEEEEEECCC-CHHHHHHHHHHH
T ss_pred Hh----CCCcEEEEEECCC-CHHHHHHHHHhC
Confidence 22 234 6662 333 456777666543
No 80
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=75.03 E-value=2.5 Score=43.98 Aligned_cols=45 Identities=16% Similarity=0.249 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy13907 419 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFS 467 (698)
Q Consensus 419 ~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t 467 (698)
+.-.++++++.++|+|+|++|.+++..+++.+.+++. .|+++..+
T Consensus 167 ~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~----iP~~~N~~ 211 (295)
T 1xg4_A 167 DAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ----VPILANIT 211 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC----SCBEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC----CCEEEEec
Confidence 4456789999999999999999999999999888774 68876654
No 81
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=74.97 E-value=14 Score=38.39 Aligned_cols=102 Identities=17% Similarity=0.054 Sum_probs=67.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEec-cc-----CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAIE-TL-----PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~E-Ti-----~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.+++ +.++..++.+++.|||.|++= |. -+..|-+.+++.+.+. .+.||++... .+..+
T Consensus 29 ~iD~----~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg----------~~t~~ 94 (316)
T 3e96_A 29 SIDW----HHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG----------YATST 94 (316)
T ss_dssp CBCH----HHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC----------SSHHH
T ss_pred CCCH----HHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC----------cCHHH
Confidence 4666 456677888889999998752 21 2566777777766643 3589887652 24666
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecC
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPN 526 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPN 526 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+
T Consensus 95 ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 95 AIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 76655432224556666644 25567888888776 6899999976
No 82
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=74.64 E-value=42 Score=34.51 Aligned_cols=131 Identities=17% Similarity=0.158 Sum_probs=80.6
Q ss_pred HHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCCcCCCCCCCCC
Q psy13907 324 YVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDGSE 403 (698)
Q Consensus 324 yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP~~~~l~~~~e 403 (698)
-+++|.+.|... ..+|.......++++.++..+..+..++.||+. ...|-+.++-.. +.|
T Consensus 92 a~~aG~~~v~i~-~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~--------------G~~V~~~l~~~~-----~~e 151 (302)
T 2ftp_A 92 ALESGVKEVAVF-AAASEAFSQRNINCSIKDSLERFVPVLEAARQH--------------QVRVRGYISCVL-----GCP 151 (302)
T ss_dssp HHHTTCCEEEEE-EESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHT--------------TCEEEEEEECTT-----CBT
T ss_pred HHhCCcCEEEEE-EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC--------------CCeEEEEEEEEe-----eCC
Confidence 467899987654 234454444445777777666666666666543 134666665531 112
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---cCCHHHHHHHHHHHHhcC-CCeEEEEEEecCCCccCCCCc
Q psy13907 404 YRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIET---LPAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHGDK 479 (698)
Q Consensus 404 y~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ET---i~~~~Eakaa~~a~~~~~-~~Pv~iS~t~~~~g~l~~G~~ 479 (698)
|.+ ..+.++ +.+.++.+.+.|+|.|.+=+ +....+....+..+++.. +.| +++-+.+ -.|..
T Consensus 152 ~~~----~~~~~~----~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~--l~~H~Hn----~~Gla 217 (302)
T 2ftp_A 152 YDG----DVDPRQ----VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRER--LAGHFHD----TYGQA 217 (302)
T ss_dssp TTB----CCCHHH----HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGG--EEEEEBC----TTSCH
T ss_pred cCC----CCCHHH----HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEEeCC----CccHH
Confidence 222 245554 55556667889999986653 245677777777777533 345 4666666 57888
Q ss_pred HHHHHHHHH
Q psy13907 480 FGLIARDVY 488 (698)
Q Consensus 480 l~~~v~~~~ 488 (698)
+..+..++.
T Consensus 218 ~An~laAv~ 226 (302)
T 2ftp_A 218 LANIYASLL 226 (302)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887774
No 83
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=74.14 E-value=17 Score=37.83 Aligned_cols=144 Identities=13% Similarity=0.016 Sum_probs=86.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-ccc-----CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-ETL-----PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-ETi-----~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ -|. -+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 39 ~iD~~----~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg---------~~st~~ 105 (315)
T 3si9_A 39 AIDEK----AFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG---------SNSTSE 105 (315)
T ss_dssp CBCHH----HHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CCCHHH
Confidence 46664 4566677788899999874 221 2466777777766642 3589887552 345677
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+. .
T Consensus 106 ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~L----a 173 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSR-----SV---IDMAVETMRDL----C 173 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHH-----HS---CCCCHHHHHHH----H
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchh-----hC---CCCCHHHHHHH----H
Confidence 77766433335566666544 24566778888776 7999999976431 12 14566655444 3
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
+.--||+|= +|| ...++.++.+..
T Consensus 174 ~~~pnIvgiKdssg-d~~~~~~l~~~~ 199 (315)
T 3si9_A 174 RDFKNIIGVKDATG-KIERASEQREKC 199 (315)
T ss_dssp HHCTTEEEEEECSC-CTHHHHHHHHHH
T ss_pred hhCCCEEEEEeCCC-CHHHHHHHHHHc
Confidence 312355552 333 356777766554
No 84
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=74.05 E-value=2.6 Score=43.87 Aligned_cols=45 Identities=16% Similarity=0.249 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy13907 81 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFS 129 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft 129 (698)
+.-.++++++.++|+|.|.+|.+++.++++.+.+.++ +|+++.++
T Consensus 167 ~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~----iP~~~N~~ 211 (295)
T 1xg4_A 167 DAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ----VPILANIT 211 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC----SCBEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC----CCEEEEec
Confidence 3455688999999999999999999999998887763 68887665
No 85
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=73.96 E-value=9.5 Score=39.34 Aligned_cols=96 Identities=8% Similarity=-0.032 Sum_probs=53.6
Q ss_pred HHHHhCCCCEEEEecCcCH----------------------------HHHHHHHHHHH-hc-CCCeEEEEEEEcCCCccC
Q psy13907 88 EALIQGGIDLLAIETLPAQ----------------------------EEAMVLAELIK-EY-PGLKAWISFSCKDEKHTC 137 (698)
Q Consensus 88 ~~l~~~GVD~il~ETi~~l----------------------------~Ea~aa~~a~~-~~-~~~Pv~iSft~~~~g~l~ 137 (698)
+.+.+.|+.++..||++.. +....-++..+ .. .+.|+++++.
T Consensus 30 ~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~-------- 101 (311)
T 1jub_A 30 EELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIA-------- 101 (311)
T ss_dssp HHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSSSCCEEEEC--------
T ss_pred HHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEcC--------
Confidence 4456789999988887632 22112222222 21 1689988873
Q ss_pred CCCCHHHHHHHHHhhCCCCce-EEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHc
Q psy13907 138 HGDKFGLIARDVYAKNPAQLV-AVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 138 ~G~~~~~~~~~l~~~~~~~~~-aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~ 210 (698)
|.++++..+.+......++| +|=+|+++|.. . . ...+-..|+.+.++++++++.
T Consensus 102 -g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~-~----g-------------~~~~g~~~e~~~~iv~~vr~~ 156 (311)
T 1jub_A 102 -GMSAAENIAMLKKIQESDFSGITELNLSCPNV-P----G-------------EPQLAYDFEATEKLLKEVFTF 156 (311)
T ss_dssp -CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS-S----S-------------CCCGGGCHHHHHHHHHHHTTT
T ss_pred -CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC-C----C-------------cccccCCHHHHHHHHHHHHHh
Confidence 44555554443222235788 88888876532 0 0 011122566777888877655
No 86
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=73.84 E-value=18 Score=38.54 Aligned_cols=92 Identities=11% Similarity=-0.014 Sum_probs=59.7
Q ss_pred EEEEecCCcCCCCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecCc-CHHHHHHHHHHHHhc--
Q psy13907 48 RVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAI-----ETLP-AQEEAMVLAELIKEY-- 119 (698)
Q Consensus 48 ~VAGSIGP~g~~l~~gseY~g~y~~~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi~-~l~Ea~aa~~a~~~~-- 119 (698)
.+..-+-|+.. + +.++.+ .++..++.+++.|||.|++ |... +.+|=+.+++.+.+.
T Consensus 63 i~~alvTPF~~---d---------g~ID~~----al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~ 126 (360)
T 4dpp_A 63 VITAIKTPYLP---D---------GRFDLE----AYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG 126 (360)
T ss_dssp EEEECCCCBCT---T---------SSBCHH----HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCcCCC---C---------CCcCHH----HHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC
Confidence 55566777643 1 135554 5566777888899999887 5332 567777777766653
Q ss_pred CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 120 PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 120 ~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
..+||++... +.+..++++..+.....|+|++.+-.
T Consensus 127 grvpViaGvg---------~~st~eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 127 GSIKVIGNTG---------SNSTREAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp TTSEEEEECC---------CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCeEEEecC---------CCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3589997652 34567777655433347899988865
No 87
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=73.72 E-value=27 Score=36.16 Aligned_cols=142 Identities=8% Similarity=-0.026 Sum_probs=87.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++.+.+. .+.||++.. .+.+..+
T Consensus 31 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ 97 (307)
T 3s5o_A 31 EVDYG----KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS---------GCESTQA 97 (307)
T ss_dssp CBCHH----HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC---------CCSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec---------CCCCHHH
Confidence 46664 5667788889999998865 32 23566777788877764 357988654 2345667
Q ss_pred HHHHHHHhCCCCceEEEEcC---C----ChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC---L----APHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPR 553 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC---~----~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~ 553 (698)
+++........+.+++.+-. . ..+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 98 ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La-- 167 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPAN-----TG---LDLPVDAVVTLS-- 167 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHH-----HS---CCCCHHHHHHHH--
T ss_pred HHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcc-----cC---CCCCHHHHHHHh--
Confidence 77765433335667777754 1 3456777877776 7899999976431 12 145666665543
Q ss_pred HHHcCCeEEee--cCCCchHHHHHHHhc
Q psy13907 554 WLDTGVKYVGG--CCRTNADDMKNVNQV 579 (698)
Q Consensus 554 ~~~~G~~iiGG--CCGTtP~hI~al~~~ 579 (698)
+. -||+|= +|| ...++..+.+.
T Consensus 168 --~~-pnIvgiKdssg-d~~~~~~~~~~ 191 (307)
T 3s5o_A 168 --QH-PNIVGMXDSGG-DVTRIGLIVHK 191 (307)
T ss_dssp --TS-TTEEEEEECSC-CHHHHHHHHHH
T ss_pred --cC-CCEEEEEcCCC-CHHHHHHHHHh
Confidence 32 355542 222 45666666543
No 88
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=73.42 E-value=14 Score=38.17 Aligned_cols=133 Identities=17% Similarity=0.156 Sum_probs=79.2
Q ss_pred HHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCCcCCCCCCC
Q psy13907 322 RDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDG 401 (698)
Q Consensus 322 ~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP~~~~l~~~ 401 (698)
+.-+++|+|+|... ..++.......++.+.+++.+....+++.||+. +.. |-+.+.-. + +
T Consensus 87 ~~a~~ag~~~v~i~-~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~------------G~~--v~~~l~~~---~--~ 146 (298)
T 2cw6_A 87 EAAVAAGAKEVVIF-GAASELFTKKNINCSIEESFQRFDAILKAAQSA------------NIS--VRGYVSCA---L--G 146 (298)
T ss_dssp HHHHHTTCSEEEEE-EESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHT------------TCE--EEEEEETT---T--C
T ss_pred HHHHHCCCCEEEEE-ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC------------CCe--EEEEEEEE---e--e
Confidence 34568899988764 355655444445777777666666666666553 222 33332210 0 0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEe-ccc--CCHHHHHHHHHHHHhcC-CCeEEEEEEecCCCccCCC
Q psy13907 402 SEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAI-ETL--PAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHG 477 (698)
Q Consensus 402 ~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~-ETi--~~~~Eakaa~~a~~~~~-~~Pv~iS~t~~~~g~l~~G 477 (698)
-||.+ ..+.+ ++.+.++.+.+.|+|.|-+ -|+ -...+....+.++++.. +.| +++-+.+ -.|
T Consensus 147 ~~~~~----~~~~~----~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~--i~~H~Hn----~~G 212 (298)
T 2cw6_A 147 CPYEG----KISPA----KVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAA--LAVHCHD----TYG 212 (298)
T ss_dssp BTTTB----SCCHH----HHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGG--EEEEEBC----TTS
T ss_pred CCcCC----CCCHH----HHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEEECC----CCc
Confidence 12222 23454 4556677788899998844 343 45778888888888632 344 5777776 467
Q ss_pred CcHHHHHHHHH
Q psy13907 478 DKFGLIARDVY 488 (698)
Q Consensus 478 ~~l~~~v~~~~ 488 (698)
..+..++.++.
T Consensus 213 la~An~laA~~ 223 (298)
T 2cw6_A 213 QALANTLMALQ 223 (298)
T ss_dssp CHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 76666666663
No 89
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=73.34 E-value=18 Score=37.58 Aligned_cols=145 Identities=8% Similarity=-0.013 Sum_probs=87.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-cc-----cCCHHHHHHHHHHHHhc-CCCeEEEEEEecCCCccCCCCcHHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-ET-----LPAQEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGDKFGLI 483 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-ET-----i~~~~Eakaa~~a~~~~-~~~Pv~iS~t~~~~g~l~~G~~l~~~ 483 (698)
.+++ +.++..++.+++.|||.|++ -| .-+..|-+.+++.+.+. .+.||++.. .+.+..++
T Consensus 25 ~iD~----~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGv---------g~~~t~~a 91 (313)
T 3dz1_A 25 KIDD----VSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGV---------SAPGFAAM 91 (313)
T ss_dssp CBCH----HHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEEC---------CCSSHHHH
T ss_pred CcCH----HHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEec---------CCCCHHHH
Confidence 4666 44667778888899998766 22 23566777777766643 468988754 23456677
Q ss_pred HHHHHHhCCCCceEEEEcC----CChhhhHHHHHHhc--CC--CCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 484 ARDVYAKNPAQLVAVGVNC----LAPHYVESLLTSAG--RD--VPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 484 v~~~~~~~~~~~~~iGlNC----~~p~~~~~~l~~l~--~~--~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
++........+++++.+-. ...+.+..+.+.+. .+ .|+++|-+-+. .| .+.+++.+.+ +.
T Consensus 92 i~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~-----tg---~~l~~~~~~~----La 159 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLT-----LS---VVMTPKVIRQ----IV 159 (313)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHH-----HC---CCCCHHHHHH----HH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccc-----cC---cCCCHHHHHH----HH
Confidence 7665432224556666643 24566777777775 45 99999976431 12 1455654444 44
Q ss_pred HcCCeEEe---ecCCCchHHHHHHHhccc
Q psy13907 556 DTGVKYVG---GCCRTNADDMKNVNQVPV 581 (698)
Q Consensus 556 ~~G~~iiG---GCCGTtP~hI~al~~~v~ 581 (698)
+.--||+| .|+| ...++.++.+...
T Consensus 160 ~~~pnIvgiKd~~~~-~~~~~~~~~~~~~ 187 (313)
T 3dz1_A 160 MDSASCVMLKHEDWP-GLEKITTLRGFQK 187 (313)
T ss_dssp HHCSSEEEEEECCSS-CHHHHHHHHHHHH
T ss_pred HhCCCEEEEEcCCCC-CHHHHHHHHHhcC
Confidence 33355665 3333 4677777776653
No 90
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=73.28 E-value=54 Score=33.86 Aligned_cols=44 Identities=11% Similarity=0.094 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhCCCCEEEEecCc---------CHHHHHHHH---HHHHhcCCCeEE
Q psy13907 82 YHRPRIEALIQGGIDLLAIETLP---------AQEEAMVLA---ELIKEYPGLKAW 125 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ETi~---------~l~Ea~aa~---~a~~~~~~~Pv~ 125 (698)
.-..+++.+++.|+|+|=+=--+ .-+|++.++ +++++..++|+.
T Consensus 64 ~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiS 119 (297)
T 1tx2_A 64 AAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPIS 119 (297)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEE
Confidence 33446777778999998776322 267777666 444442366653
No 91
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=73.21 E-value=16 Score=37.72 Aligned_cols=113 Identities=12% Similarity=0.130 Sum_probs=65.9
Q ss_pred HHHHHhCCCCEEEecccCCHH-------------------------HHHHHHHHHHh---cCCCeEEEEEEecCCCccCC
Q psy13907 425 IEALIQGGIDLLAIETLPAQE-------------------------EAMVLAELIKE---YPGLKAWISFSCKDEKHTCH 476 (698)
Q Consensus 425 i~~L~~~GvDlll~ETi~~~~-------------------------Eakaa~~a~~~---~~~~Pv~iS~t~~~~g~l~~ 476 (698)
++.+.+.|+.++..+|++.-. .....++-+++ ..+.|+.+++.
T Consensus 31 ~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~--------- 101 (314)
T 2e6f_A 31 LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSIS--------- 101 (314)
T ss_dssp HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEEC---------
T ss_pred HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeC---------
Confidence 445678899998887754321 11222222332 24689988874
Q ss_pred CCcHH---HHHHHHHHhCCCCce---EEEEcCC------------ChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCc
Q psy13907 477 GDKFG---LIARDVYAKNPAQLV---AVGVNCL------------APHYVESLLTSAG--RDVPLLCCPNSGETFDPGQR 536 (698)
Q Consensus 477 G~~l~---~~v~~~~~~~~~~~~---~iGlNC~------------~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g 536 (698)
|.+.. ++++.+.+ .+.+ .|=+|+. .++.+..+++.+. .+.|+++.-..+
T Consensus 102 g~~~~~~~~~a~~~~~---~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~-------- 170 (314)
T 2e6f_A 102 GLSVEENVAMVRRLAP---VAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY-------- 170 (314)
T ss_dssp CSSHHHHHHHHHHHHH---HHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC--------
T ss_pred CCCHHHHHHHHHHHHH---hCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC--------
Confidence 34444 45555533 2345 6666664 3445566677665 478888764321
Q ss_pred ccccCCChhhHHHHHHHHHHcC-CeEE
Q psy13907 537 IWMNKDSVPSVDTYVPRWLDTG-VKYV 562 (698)
Q Consensus 537 ~~~~~~~p~~~a~~~~~~~~~G-~~ii 562 (698)
| +.+++.+.++...+.| +..|
T Consensus 171 -~----~~~~~~~~a~~~~~aG~~d~i 192 (314)
T 2e6f_A 171 -F----DIAHFDTAAAVLNEFPLVKFV 192 (314)
T ss_dssp -C----CHHHHHHHHHHHHTCTTEEEE
T ss_pred -C----CHHHHHHHHHHHHhcCCceEE
Confidence 1 3456777777788888 7755
No 92
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=73.15 E-value=4.6 Score=42.22 Aligned_cols=44 Identities=16% Similarity=0.158 Sum_probs=37.8
Q ss_pred HHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy13907 83 HRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFS 129 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft 129 (698)
-.+|++++.++|+|.|.+|-+++.+|++.+.+.+. ++|+++.++
T Consensus 180 Ai~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~---~~Pv~~n~~ 223 (307)
T 3lye_A 180 CIERLRAARDEGADVGLLEGFRSKEQAAAAVAALA---PWPLLLNSV 223 (307)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT---TSCBEEEEE
T ss_pred HHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc---CCceeEEee
Confidence 34689999999999999999999999999888775 478888775
No 93
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=73.07 E-value=6.4 Score=41.94 Aligned_cols=64 Identities=9% Similarity=-0.005 Sum_probs=39.2
Q ss_pred CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhC---CCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCC
Q psy13907 120 PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKN---PAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRK 196 (698)
Q Consensus 120 ~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~---~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~g 196 (698)
.+.|+++|+. |.++++.++.+.... ..++|+|=|||+.|..- ....+-..
T Consensus 125 ~~~pvivsI~---------G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~------------------gg~~l~~~ 177 (354)
T 4ef8_A 125 GKKPLFLSMS---------GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP------------------GKPQVAYD 177 (354)
T ss_dssp TTCCEEEEEC---------CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST------------------TSCCGGGS
T ss_pred CCCcEEEEec---------cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC------------------CchhhccC
Confidence 4689999872 445555544332211 23578999999876431 00111236
Q ss_pred hHHHHHHHHHHHHc
Q psy13907 197 PIQLLSIELELAAA 210 (698)
Q Consensus 197 P~~~~~~~~~l~~~ 210 (698)
|+.+.++++.+.+.
T Consensus 178 ~e~~~~il~av~~~ 191 (354)
T 4ef8_A 178 FDAMRQCLTAVSEV 191 (354)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88888999988876
No 94
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=73.06 E-value=23 Score=36.42 Aligned_cols=142 Identities=8% Similarity=-0.015 Sum_probs=86.5
Q ss_pred CCCHHHHHHHHHHHHHHHHh-CCCCEEEe-----cc-cCCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHH
Q psy13907 411 STTPQELIDYHRPRIEALIQ-GGIDLLAI-----ET-LPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFG 481 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~-~GvDlll~-----ET-i~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~ 481 (698)
.++++ .++..++.+++ .|||.|++ |. .-+..|-+.+++.+.+. .+.||++... +.+..
T Consensus 20 ~iD~~----~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~ 86 (293)
T 1f6k_A 20 TINEK----GLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG---------SVNLK 86 (293)
T ss_dssp CBCHH----HHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC---------CSCHH
T ss_pred CcCHH----HHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC---------CCCHH
Confidence 46664 45667788888 99999876 42 24566767777766642 3589886552 34566
Q ss_pred HHHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHH
Q psy13907 482 LIARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRW 554 (698)
Q Consensus 482 ~~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~ 554 (698)
++++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 87 ~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La--- 155 (293)
T 1f6k_A 87 EAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFL-----TG---VNMGIEQFGELY--- 155 (293)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHH-----HC---CCCCHHHHHHHH---
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccc-----cC---cCCCHHHHHHHh---
Confidence 777655432234566666654 24566777777775 6799999976531 12 145666665543
Q ss_pred HHcCCeEEee--cCCCchHHHHHHHhc
Q psy13907 555 LDTGVKYVGG--CCRTNADDMKNVNQV 579 (698)
Q Consensus 555 ~~~G~~iiGG--CCGTtP~hI~al~~~ 579 (698)
+ --||+|= +|| ...++.++.+.
T Consensus 156 -~-~pnIvgiK~s~g-d~~~~~~~~~~ 179 (293)
T 1f6k_A 156 -K-NPKVLGVKFTAG-DFYLLERLKKA 179 (293)
T ss_dssp -T-STTEEEEEECSC-CHHHHHHHHHH
T ss_pred -c-CCCEEEEEECCC-CHHHHHHHHHh
Confidence 2 2456662 333 35677777653
No 95
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=72.67 E-value=22 Score=36.52 Aligned_cols=139 Identities=6% Similarity=0.037 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHhCCCCEEEec-cc-----CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHHHHHHHHHh
Q psy13907 419 DYHRPRIEALIQGGIDLLAIE-TL-----PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAK 490 (698)
Q Consensus 419 ~~y~~qi~~L~~~GvDlll~E-Ti-----~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~ 490 (698)
+.++..++.+++.|||-|++= |. -+..|-+.+++.+.+. .+.||++... +.+..++++.....
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg---------~~~t~~ai~la~~a 93 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG---------TNDTEKSIQASIQA 93 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC---------CSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------cccHHHHHHHHHHH
Confidence 556677888889999998752 22 2467777777766643 4589987642 33466676655432
Q ss_pred CCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEEe
Q psy13907 491 NPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVG 563 (698)
Q Consensus 491 ~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiG 563 (698)
...+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+. .+. -||+|
T Consensus 94 ~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~-----tg---~~l~~~~~~~L----a~~-pnivg 160 (292)
T 3daq_A 94 KALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSR-----TN---MTIEPETVEIL----SQH-PYIVA 160 (292)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHH-----HS---CCCCHHHHHHH----HTS-TTEEE
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccc-----cC---CCCCHHHHHHH----hcC-CCEEE
Confidence 224555555544 24466777877776 6899999965431 12 14566665543 332 35555
Q ss_pred e--cCCCchHHHHHHHhcc
Q psy13907 564 G--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 564 G--CCGTtP~hI~al~~~v 580 (698)
= +|| ..++++++.+..
T Consensus 161 iK~ssg-d~~~~~~~~~~~ 178 (292)
T 3daq_A 161 LKDATN-DFEYLEEVKKRI 178 (292)
T ss_dssp EEECCC-CHHHHHHHHTTS
T ss_pred EEeCCC-CHHHHHHHHHHC
Confidence 2 333 456666665543
No 96
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=71.98 E-value=3.8 Score=42.63 Aligned_cols=45 Identities=16% Similarity=0.121 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcCCCeEEEE
Q psy13907 419 DYHRPRIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYPGLKAWIS 465 (698)
Q Consensus 419 ~~y~~qi~~L~~~GvDlll~ET-i~~~~Eakaa~~a~~~~~~~Pv~iS 465 (698)
+.-.++++++.++|+|+|++|+ +++..+++.+.+.++. ..|+++.
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~~P~i~~ 215 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN--QGPVVIV 215 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT--CSCEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC--CCCEEEe
Confidence 3345789999999999999998 8999999999988862 4788755
No 97
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=71.86 E-value=22 Score=36.94 Aligned_cols=143 Identities=12% Similarity=-0.010 Sum_probs=85.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEE-eccc-----CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLA-IETL-----PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll-~ETi-----~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.++++ .++..++.+++.|||.|+ .-|. -+..|-+.+++.+.+. .+.||++... +.+..+
T Consensus 24 ~iD~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg---------~~~t~~ 90 (311)
T 3h5d_A 24 SINFD----AIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG---------TNDTRD 90 (311)
T ss_dssp SBCTT----HHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC---------CSSHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC---------CcCHHH
Confidence 35554 456677778889999765 4343 3567777888777753 3579887642 335667
Q ss_pred HHHHHHHhCCCCc-eEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHH
Q psy13907 483 IARDVYAKNPAQL-VAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRW 554 (698)
Q Consensus 483 ~v~~~~~~~~~~~-~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~ 554 (698)
+++........+. +++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.+
T Consensus 91 ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~La--- 159 (311)
T 3h5d_A 91 SIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGR-----VV---VELTPETMLRLA--- 159 (311)
T ss_dssp HHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHH-----HS---SCCCHHHHHHHH---
T ss_pred HHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccc-----cC---CCCCHHHHHHHh---
Confidence 7766543222333 5665554 24466778888776 7899999966421 12 145666665443
Q ss_pred HHcCCeEEeecCCCchHHHHHHHhc
Q psy13907 555 LDTGVKYVGGCCRTNADDMKNVNQV 579 (698)
Q Consensus 555 ~~~G~~iiGGCCGTtP~hI~al~~~ 579 (698)
+. -||+|==-.+...++.++.+.
T Consensus 160 -~~-pnIvgiKdssd~~~~~~~~~~ 182 (311)
T 3h5d_A 160 -DH-PNIIGVKECTSLANMAYLIEH 182 (311)
T ss_dssp -TS-TTEEEEEECSCHHHHHHHHHH
T ss_pred -cC-CCEEEEEeCCCHHHHHHHHHH
Confidence 33 455553211166777666554
No 98
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=71.62 E-value=90 Score=32.47 Aligned_cols=82 Identities=13% Similarity=0.237 Sum_probs=45.6
Q ss_pred HHHHHHhCCCCEEEec-ccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCc--HHHHHHHHHHhCCCCceEEEE
Q psy13907 424 RIEALIQGGIDLLAIE-TLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDK--FGLIARDVYAKNPAQLVAVGV 500 (698)
Q Consensus 424 qi~~L~~~GvDlll~E-Ti~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~--l~~~v~~~~~~~~~~~~~iGl 500 (698)
.++.+.+.|+|.|-+. ++.++.++|.. + +-.+.+...+++...+..|+. +.+-+..+.+ .+...+++
T Consensus 254 ~l~~~~~~g~d~i~~d~~~~~~~~~k~~---~----g~~~~l~Gnldp~~~l~~g~~e~i~~~v~~~l~---~~g~I~~~ 323 (348)
T 4ay7_A 254 ILSDMADCGFEGLSVEEKIGSAKKGKEV---I----GTRARLVGNVSSPFTLLPGPVDKIKAEAKEALE---GGIDVLAP 323 (348)
T ss_dssp HHHHHHTSCCSEEECCGGGCCHHHHHHH---H----TTSSEEEEEECCCCCCTTCCHHHHHHHHHHHHH---TTCSEEEE
T ss_pred HHHHHHHhccccccccchhhHHHHHHHH---h----CCCEEEEcCCCChHhhcCCCHHHHHHHHHHHHh---CCCCEEeC
Confidence 3556778999999876 55566554422 2 222345677766566677742 3333333333 22345666
Q ss_pred cC-C----ChhhhHHHHHHh
Q psy13907 501 NC-L----APHYVESLLTSA 515 (698)
Q Consensus 501 NC-~----~p~~~~~~l~~l 515 (698)
.| . .++.++.+++..
T Consensus 324 Ghgi~p~tp~env~a~v~av 343 (348)
T 4ay7_A 324 GCGIAPMTPLENVKALVAAR 343 (348)
T ss_dssp SSSCCTTCCHHHHHHHHHHH
T ss_pred CCccCCCCCHHHHHHHHHHH
Confidence 77 3 355666665543
No 99
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=71.54 E-value=5.7 Score=41.69 Aligned_cols=54 Identities=15% Similarity=-0.004 Sum_probs=24.1
Q ss_pred CccEEeecCCCC-ceeecCeeeeeee----ccchhhhccccchhhhhHHHHHHHHhhCce----EEEeccccc
Q psy13907 223 EAPLKAKPNRSL-FETYHGVFVNVQY----NLKCELKRSHFNILSKDLQKINEFILENKL----YLIDGGFSS 286 (698)
Q Consensus 223 ~~~~~~~pnag~-p~~~~~~~~~~~~----~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~----~i~dG~~gt 286 (698)
+.|+.+|++.|. |+..+.+. .| ..-.++.. ++|.+-. +.+.+.++ +|+|=|+|+
T Consensus 160 g~~vVlmh~~G~~p~tmq~~~---~y~~~~~dv~~ev~---~~l~~~i----~~a~~aGI~~~~IilDPG~GF 222 (318)
T 2vp8_A 160 GAGLVCAHTGGALPRTRPFRV---SYGTTTRGVVDAVI---SQVTAAA----ERAVAAGVAREKVLIDPAHDF 222 (318)
T ss_dssp TCEEEEECC----------------CCSCHHHHHHHHH---HHHHHHH----HHHHHTTCCGGGEEEETTTTC
T ss_pred CCCEEEECCCCCCcccccccc---ccccccccHHHHHH---HHHHHHH----HHHHHcCCChhhEEEcCCCCc
Confidence 789999999999 88765443 35 22222222 1333322 33344444 899998875
No 100
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=71.49 E-value=39 Score=34.45 Aligned_cols=114 Identities=11% Similarity=0.127 Sum_probs=61.8
Q ss_pred ChHHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHH-HH------HHHHHHHHHHHHHhhccCCccCCCCc
Q psy13907 313 NRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQ-LI------RDAVKYVKEAIALEEKRDPAIASRHV 385 (698)
Q Consensus 313 ~Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~e-ln------~~av~lAr~A~~~~~~~~~~~~~~~~ 385 (698)
+++.-.++-+...++|||+|+-..--..|. ++ |-...++.. -. ....++.++.+.++ ...|+
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~--aD--GpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~-------~~~Pi 100 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPL--AD--GPTIQGANLRALAAKTTPDICFELIAQIRARN-------PETPI 100 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGG--GC--CSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-------TTSCE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCC--CC--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-------CCCCE
Confidence 334556778888899999998776544432 22 321111100 00 12345666666542 12344
Q ss_pred EEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCe
Q psy13907 386 RVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLK 461 (698)
Q Consensus 386 ~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~P 461 (698)
.+-+-..|. +. | -...-++.+.++|||.+++=..|. .|+.....+++++ ++.
T Consensus 101 vlm~Y~n~v---~~--------~-----------g~~~f~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~-gl~ 152 (271)
T 3nav_A 101 GLLMYANLV---YA--------R-----------GIDDFYQRCQKAGVDSVLIADVPT-NESQPFVAAAEKF-GIQ 152 (271)
T ss_dssp EEEECHHHH---HH--------T-----------CHHHHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHT-TCE
T ss_pred EEEecCcHH---HH--------H-----------hHHHHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHc-CCe
Confidence 433322221 10 0 023445567788999998866664 5677777888874 554
No 101
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=71.41 E-value=5.3 Score=41.74 Aligned_cols=87 Identities=14% Similarity=0.105 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEE
Q psy13907 419 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 498 (698)
Q Consensus 419 ~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~i 498 (698)
+.-.++++++.++|+|+|++|-+.+..|++.+..++. ..|+++..+ ..|.++ .-+. +.|.+. +-....+
T Consensus 178 deAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~---~~Pv~~n~~--~~g~~p-~~t~----~eL~~l-Gv~~v~~ 246 (307)
T 3lye_A 178 EECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALA---PWPLLLNSV--ENGHSP-LITV----EEAKAM-GFRIMIF 246 (307)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT---TSCBEEEEE--TTSSSC-CCCH----HHHHHH-TCSEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc---CCceeEEee--cCCCCC-CCCH----HHHHHc-CCeEEEE
Confidence 3345789999999999999999999999999888885 478877665 223222 1223 233221 3444555
Q ss_pred EEcCC--ChhhhHHHHHHhc
Q psy13907 499 GVNCL--APHYVESLLTSAG 516 (698)
Q Consensus 499 GlNC~--~p~~~~~~l~~l~ 516 (698)
+.-+. .-..|...++.+.
T Consensus 247 ~~~~~raa~~a~~~~~~~l~ 266 (307)
T 3lye_A 247 SFATLAPAYAAIRETLVRLR 266 (307)
T ss_dssp ETTTHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHH
Confidence 55552 2344666666664
No 102
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=71.09 E-value=44 Score=34.15 Aligned_cols=136 Identities=9% Similarity=0.043 Sum_probs=84.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 484 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v 484 (698)
.+++ +.++..++.+++.|+|.|++ |. .-+..|-+.+++.+.+...- |+ ..+ .+.+..+++
T Consensus 16 ~iD~----~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-Vi-aGv--------g~~~t~~ai 81 (288)
T 2nuw_A 16 KVNV----DALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LI-FQV--------GSLNLNDVM 81 (288)
T ss_dssp CBCH----HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EE-EEC--------CCSCHHHHH
T ss_pred CcCH----HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eE-Eee--------CCCCHHHHH
Confidence 4666 44566777788899999876 42 34566777888887764333 44 332 344667777
Q ss_pred HHHHHhCCCCceEEEEcC------CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHH
Q psy13907 485 RDVYAKNPAQLVAVGVNC------LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLD 556 (698)
Q Consensus 485 ~~~~~~~~~~~~~iGlNC------~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~ 556 (698)
+........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+.
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~L------ 147 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAA-----TG---YDIPPSILKSL------ 147 (288)
T ss_dssp HHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHH-----HS---CCCCHHHHTTT------
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchH-----hC---cCCCHHHHhcc------
Confidence 766544446777777755 13355777777775 7899999976531 12 14456555443
Q ss_pred cCCeEEee--cCCCchHHHHHHHh
Q psy13907 557 TGVKYVGG--CCRTNADDMKNVNQ 578 (698)
Q Consensus 557 ~G~~iiGG--CCGTtP~hI~al~~ 578 (698)
||+|= +|| ...++..+.+
T Consensus 148 ---nIvgiKdssg-d~~~~~~~~~ 167 (288)
T 2nuw_A 148 ---PVKGIKDTNQ-DLAHSLEYKL 167 (288)
T ss_dssp ---TEEEEEECCS-CHHHHHHHHH
T ss_pred ---EEEEEEeCCC-CHHHHHHHHh
Confidence 66662 333 3566666654
No 103
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=70.99 E-value=73 Score=35.02 Aligned_cols=96 Identities=15% Similarity=0.222 Sum_probs=64.5
Q ss_pred HHHHHHHhCCCCEEE-ecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHH---HHHHHHHHhCCCCceEE
Q psy13907 423 PRIEALIQGGIDLLA-IETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFG---LIARDVYAKNPAQLVAV 498 (698)
Q Consensus 423 ~qi~~L~~~GvDlll-~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~---~~v~~~~~~~~~~~~~i 498 (698)
.-++...++|+|.+- +-..++..+++.+++++++. +..+..++++.+..+ .++. +.++.+.+ .++..|
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~-G~~v~~~i~~~~~~~----~~~e~~~~~a~~l~~---~Gad~I 175 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKM-GAHAQGTLCYTTSPV----HNLQTWVDVAQQLAE---LGVDSI 175 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHT-TCEEEEEEECCCCTT----CCHHHHHHHHHHHHH---TTCSEE
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHC-CCEEEEEEEeeeCCC----CCHHHHHHHHHHHHH---CCCCEE
Confidence 345557789999874 44667889999999999984 677766665544322 2444 44444443 455566
Q ss_pred EEc----CCChhhhHHHHHHhc--CCCCEEEecC
Q psy13907 499 GVN----CLAPHYVESLLTSAG--RDVPLLCCPN 526 (698)
Q Consensus 499 GlN----C~~p~~~~~~l~~l~--~~~pl~~yPN 526 (698)
.+- ...|..+..+++.+. .+.||.++..
T Consensus 176 ~l~DT~G~~~P~~v~~lv~~l~~~~~~~i~~H~H 209 (464)
T 2nx9_A 176 ALKDMAGILTPYAAEELVSTLKKQVDVELHLHCH 209 (464)
T ss_dssp EEEETTSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred EEcCCCCCcCHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 653 256999999998886 5688887764
No 104
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=70.46 E-value=3.3 Score=42.98 Aligned_cols=46 Identities=13% Similarity=0.108 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhCCCCEEEEec-CcCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy13907 82 YHRPRIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYPGLKAWISFS 129 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ET-i~~l~Ea~aa~~a~~~~~~~Pv~iSft 129 (698)
.-.++++++.++|+|.|++|. +++.+|++.+.+.+.. .+|+++.++
T Consensus 167 ~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~--~vP~i~n~~ 213 (290)
T 2hjp_A 167 EAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPG--KVPLVLVPT 213 (290)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCC--SSCEEECGG
T ss_pred HHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCC--CCCEEEecc
Confidence 344588999999999999999 9999999888776542 378886543
No 105
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=70.35 E-value=1.3 Score=46.26 Aligned_cols=53 Identities=21% Similarity=0.149 Sum_probs=35.3
Q ss_pred ccccCCcccEEE-EeecCCchhhhhhhhhcccccccccchhhhhhhhhhhhcccc
Q psy13907 614 SVVRPFTGEIVI-EQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGN 667 (698)
Q Consensus 614 ~~~~p~~~~~~v-Er~nv~~~s~~~~Lir~e~~~~~~~~~~~~~~iq~~qi~~g~ 667 (698)
+.+.+.+.+++| ||.|++++..|...++..++..+...|++..+ +..+|.|-+
T Consensus 4 ~~~~~~~~~~iIGEriNvTg~~sf~~~~~~~~~~~a~~~A~~~v~-~GAdiIDIg 57 (300)
T 3k13_A 4 LEVKPEINFVNIGERCNVAGSRKFLRLVNEKKYDEALSIARQQVE-DGALVIDVN 57 (300)
T ss_dssp -----CTTCEEEEEEEETTTCHHHHHHHHTTCHHHHHHHHHHHHH-TTCSEEEEE
T ss_pred eeeCCCCCcEEEEEeccCCCCHHHHHHHhcCCHHHHHHHHHHHHH-CCCCEEEEC
Confidence 344677889999 99999999999999997777666665544443 344454433
No 106
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=70.26 E-value=3.4 Score=43.16 Aligned_cols=44 Identities=18% Similarity=0.242 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy13907 82 YHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFS 129 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft 129 (698)
.-.+|++++.++|+|.|.+|.+++.+|++.+.+.+ +.|+++.++
T Consensus 176 ~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~----~~P~~~n~~ 219 (305)
T 3ih1_A 176 EAIERANAYVKAGADAIFPEALQSEEEFRLFNSKV----NAPLLANMT 219 (305)
T ss_dssp HHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS----CSCBEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc----CCCEEEeec
Confidence 34468899999999999999999999988877664 468877664
No 107
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=69.94 E-value=26 Score=37.24 Aligned_cols=146 Identities=11% Similarity=0.098 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEecCcCH----HHH-HHHHHHHHhc-CC--CeEEEEEEEcCC--------CccCCC
Q psy13907 76 PQELIDYHRPRIEALIQGGIDLLAIETLPAQ----EEA-MVLAELIKEY-PG--LKAWISFSCKDE--------KHTCHG 139 (698)
Q Consensus 76 ~eel~~~~~~qi~~l~~~GVD~il~ETi~~l----~Ea-~aa~~a~~~~-~~--~Pv~iSft~~~~--------g~l~~G 139 (698)
..++...|++-++.|.++|+|+|-+-= |.+ .+. ..++++++.. .+ .++.+.+...+. ......
T Consensus 166 ~~dlA~a~~~ei~~l~~aG~~~IQiDe-P~l~~~~~~~~~~~v~~~n~~~~~~~~~~~iHiC~G~~~~~n~d~~~t~~~~ 244 (357)
T 3rpd_A 166 AWEFAKILNEEAKELEAAGVDIIQFDE-PAFNVFFDEVNDWGIACLERAIEGLKCETAVHICYGYGIKANTDWKKTLGSE 244 (357)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEC-GGGGTCHHHHHHTHHHHHHHHHTTCCSEEEEEECSCCSSHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecC-ccccccHHHHHHHHHHHHHHHHhCCCCceEEEEecCCccCCccccccccccc
Confidence 456889999999999999999887752 222 232 3345555542 23 344554443210 000001
Q ss_pred -CCHHHHHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhh-cccccccccccccCCChHHHHHHHHHHHHcCCCCCCC
Q psy13907 140 -DKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVE-GQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGT 217 (698)
Q Consensus 140 -~~~~~~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~-~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~ 217 (698)
.....++..+.. .++|++.+-+.....-..+++.++.. ...-.++.+... -+.|+++.+.+++..+.
T Consensus 245 ~g~y~~i~~~l~~---~~~D~i~lE~~~~r~~~e~l~~~~~k~v~lGvvd~~s~~-ve~~eev~~ri~~a~~~------- 313 (357)
T 3rpd_A 245 WRQYEEVFPKLQK---SNIDIISLECHNSHVPMELLELIRGKKVMVGAIDVATDT-IETAEEVADTLRKALKF------- 313 (357)
T ss_dssp CCGGGGTHHHHHH---SSCCEEEECCTTCCCCGGGGGGGTTSEEEEECSCTTCSS-CCCHHHHHHHHHHHHTT-------
T ss_pred cCcHHHHHHHHHh---CCCCEEEEEecCCCCChHHHHhcCCCEEEeccccCcCCC-CCCHHHHHHHHHHHHHh-------
Confidence 124556665542 68999999997643212344444321 111233444444 46899999999988764
Q ss_pred cCCCcCccEEeecCCCCce
Q psy13907 218 TQIPFEAPLKAKPNRSLFE 236 (698)
Q Consensus 218 ~~~~~~~~~~~~pnag~p~ 236 (698)
+|.+ -+++-|+-|+-.
T Consensus 314 --v~~~-~l~lsPdCGl~~ 329 (357)
T 3rpd_A 314 --VDAD-KLYPCTNCGMTP 329 (357)
T ss_dssp --SCGG-GEEEECSSCCTT
T ss_pred --CCcc-cEEEeCCCCCCC
Confidence 2323 389999999753
No 108
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=69.89 E-value=34 Score=34.96 Aligned_cols=166 Identities=16% Similarity=0.200 Sum_probs=88.0
Q ss_pred CcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEe---------cccCCHHHHHHHHHHH
Q psy13907 384 HVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAI---------ETLPAQEEAMVLAELI 454 (698)
Q Consensus 384 ~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~---------ETi~~~~Eakaa~~a~ 454 (698)
+.+|-|-+-=|..|++||.. | .+.++ -.++++.+++.|+|+|=+ +.++.-+|.+-++-++
T Consensus 6 r~~iMGIlNvTPDSFsDGG~----~---~~~~~----a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi 74 (270)
T 4hb7_A 6 KTKIMGILNVTPDSFSDGGK----F---NNVET----AINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVV 74 (270)
T ss_dssp CCEEEEEEECC-----------------CHHHH----HHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCCCCCC----C---CCHHH----HHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHH
Confidence 45788888888888888633 3 23333 346777889999999855 5577777887777777
Q ss_pred HhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC----CChhhhHHHHHHhcCCCCEEEecCCCCC
Q psy13907 455 KEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC----LAPHYVESLLTSAGRDVPLLCCPNSGET 530 (698)
Q Consensus 455 ~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC----~~p~~~~~~l~~l~~~~pl~~yPNaG~~ 530 (698)
+...+..+.||+--.. .+++++..+. +.. -+|= ..-..|.+++... +.|+++.-+.|.|
T Consensus 75 ~~l~~~~v~iSIDT~~----------~~Va~~al~a-Ga~----iINDVs~g~~d~~m~~~va~~--~~~~vlMH~~~~p 137 (270)
T 4hb7_A 75 EAIVGFDVKISVDTFR----------SEVAEACLKL-GVD----MINDQWAGLYDHRMFQIVAKY--DAEIILMHNGNGN 137 (270)
T ss_dssp HHHTTSSSEEEEECSC----------HHHHHHHHHH-TCC----EEEETTTTSSCTHHHHHHHHT--TCEEEEECCCSSC
T ss_pred HHhhcCCCeEEEECCC----------HHHHHHHHHh-ccc----eeccccccccchhHHHHHHHc--CCCeEEeccccCC
Confidence 7554445666773111 1344444331 222 1553 2234566666555 6888888777754
Q ss_pred cCCCCcccccCCChhhHHHHHHHHHHcCC---eEE---eecCCCchHHHHHHHhccc
Q psy13907 531 FDPGQRIWMNKDSVPSVDTYVPRWLDTGV---KYV---GGCCRTNADDMKNVNQVPV 581 (698)
Q Consensus 531 ~d~~~g~~~~~~~p~~~a~~~~~~~~~G~---~ii---GGCCGTtP~hI~al~~~v~ 581 (698)
.+. ..+ .+-...+.+.+....++|+ +|| |=--|-|++|=-+|-+.+.
T Consensus 138 ~~~--~vv--~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~ 190 (270)
T 4hb7_A 138 RDE--PVV--EEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLD 190 (270)
T ss_dssp CSS--CHH--HHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHH
T ss_pred ccc--cch--hHHHHHHHHHHHHHHHcCCCCceEEEeCCCCcccccccHHHHHhhHH
Confidence 310 000 0111234555566677886 343 3334567777544444444
No 109
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=69.54 E-value=16 Score=40.69 Aligned_cols=66 Identities=20% Similarity=0.205 Sum_probs=40.5
Q ss_pred HHHHHHHhCCCCEEEec-----c----------cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHH
Q psy13907 423 PRIEALIQGGIDLLAIE-----T----------LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDV 487 (698)
Q Consensus 423 ~qi~~L~~~GvDlll~E-----T----------i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~ 487 (698)
+.++.+.++|+|.+.+. . .++..-...+..++++ .++||+.++-+. +..++++++
T Consensus 284 e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~-~~iPVIa~GGI~---------~~~di~kal 353 (496)
T 4fxs_A 284 EGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE-YGIPVIADGGIR---------FSGDISKAI 353 (496)
T ss_dssp HHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGG-GTCCEEEESCCC---------SHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhcc-CCCeEEEeCCCC---------CHHHHHHHH
Confidence 45677888999999874 1 3444444555556655 368998665442 345666666
Q ss_pred HHhCCCCceEEEEcC
Q psy13907 488 YAKNPAQLVAVGVNC 502 (698)
Q Consensus 488 ~~~~~~~~~~iGlNC 502 (698)
. .+.++|.+-=
T Consensus 354 a----~GAd~V~iGs 364 (496)
T 4fxs_A 354 A----AGASCVMVGS 364 (496)
T ss_dssp H----TTCSEEEEST
T ss_pred H----cCCCeEEecH
Confidence 3 3445655543
No 110
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=68.81 E-value=50 Score=32.97 Aligned_cols=114 Identities=14% Similarity=-0.022 Sum_probs=63.4
Q ss_pred HHHHHHHhCCCCEE---EEecCcCHH----HHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHH---HHHHHHHhhCC
Q psy13907 85 PRIEALIQGGIDLL---AIETLPAQE----EAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFG---LIARDVYAKNP 154 (698)
Q Consensus 85 ~qi~~l~~~GVD~i---l~ETi~~l~----Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~---~~~~~l~~~~~ 154 (698)
++++..++.|+|.+ +..-..+.. +++.+++++++ .++|+++-.. .++.++..|.+.. +++..+. .
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~-~g~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~---~ 177 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEY-WGMPLIAMMY-PRGKHIQNERDPELVAHAARLGA---E 177 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHH-HTCCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHH---H
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHH-cCCCEEEEeC-CCCcccCCCCCHhHHHHHHHHHH---H
Confidence 45666777999999 556555544 46666777776 3788887543 3333444555553 3333332 3
Q ss_pred CCceEEEEcC-CChhhhHHHHHHhHhhcccccccc-cccccCC-ChHHHHHHHHHHHHc
Q psy13907 155 AQLVAVGVNC-LAPHYVESLLTSAEVEGQSLELPV-NNTLISR-KPIQLLSIELELAAA 210 (698)
Q Consensus 155 ~~~~aIGiNC-~~p~~i~~~l~~~~~~~~~~~~p~-~~~~~~~-gP~~~~~~~~~l~~~ 210 (698)
.+++.|+++= ..++ .++.+... ..+|+ ..|-+.. .+++.+..++++.+.
T Consensus 178 ~Gad~i~~~~~~~~~----~l~~i~~~---~~ipvva~GGi~~~~~~~~~~~~~~~~~~ 229 (273)
T 2qjg_A 178 LGADIVKTSYTGDID----SFRDVVKG---CPAPVVVAGGPKTNTDEEFLQMIKDAMEA 229 (273)
T ss_dssp TTCSEEEECCCSSHH----HHHHHHHH---CSSCEEEECCSCCSSHHHHHHHHHHHHHH
T ss_pred cCCCEEEECCCCCHH----HHHHHHHh---CCCCEEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 6889999883 2222 22333221 13443 2333333 477777766666555
No 111
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=68.57 E-value=77 Score=32.94 Aligned_cols=182 Identities=11% Similarity=0.099 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHhhccCCccCCCCcEEE--EecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCE
Q psy13907 358 LIRDAVKYVKEAIALEEKRDPAIASRHVRVA--GSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDL 435 (698)
Q Consensus 358 ln~~av~lAr~A~~~~~~~~~~~~~~~~~VA--GsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDl 435 (698)
+...|++..|++.. ...|. -++-||...=+.|.-.. +.+.-|+-.+.+.+|+-...++|+|+
T Consensus 97 ~v~rair~iK~~~p------------dl~vitDvcLc~YT~HGHcGil~~----g~V~ND~Tl~~Lak~Als~A~AGAdi 160 (323)
T 1l6s_A 97 LVARMSRICKQTVP------------EMIVMSDTCFCEYTSHGHCGVLCE----HGVDNDATLENLGKQAVVAAAAGADF 160 (323)
T ss_dssp HHHHHHHHHHHHCT------------TSEEEEEECSTTTBSSCCSSCBCS----SSBCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred cHHHHHHHHHHHCC------------CeEEEEeeeccccCCCCceEeccC----CcCccHHHHHHHHHHHHHHHHcCCCe
Confidence 66677776666532 23333 35778765445554322 34889999999999999999999999
Q ss_pred EEecccCCHHHHHHHHHHHHh--cCCCeEEEEEEec--------------CC--C--c--cCCCCcHHHHHHHHHHhCCC
Q psy13907 436 LAIETLPAQEEAMVLAELIKE--YPGLKAWISFSCK--------------DE--K--H--TCHGDKFGLIARDVYAKNPA 493 (698)
Q Consensus 436 ll~ETi~~~~Eakaa~~a~~~--~~~~Pv~iS~t~~--------------~~--g--~--l~~G~~l~~~v~~~~~~~~~ 493 (698)
+.-=-|-|- ...++..++.+ +.+.|+| |.+.+ +. | + -++-..-.+++..+......
T Consensus 161 VAPSdMMDG-rV~aIR~aLd~~G~~~v~Im-sYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~E 238 (323)
T 1l6s_A 161 IAPSAAMDG-QVQAIRQALDAAGFKDTAIM-SYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQ 238 (323)
T ss_dssp EEECSCCTT-HHHHHHHHHHHTTCTTCEEB-CCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHT
T ss_pred Eeccccccc-HHHHHHHHHHhCCCCCceee-ehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHh
Confidence 999888876 46778888875 3456755 55432 00 1 1 12222333444444322234
Q ss_pred CceEEEEcCCChhhhHHHHHHhc--CCCCEEEecCCCCCc----CCCCcccccCCChhhHHHHHHHHHHcCCeEE
Q psy13907 494 QLVAVGVNCLAPHYVESLLTSAG--RDVPLLCCPNSGETF----DPGQRIWMNKDSVPSVDTYVPRWLDTGVKYV 562 (698)
Q Consensus 494 ~~~~iGlNC~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~----d~~~g~~~~~~~p~~~a~~~~~~~~~G~~ii 562 (698)
+.+.|.|-=..| .+.+++.++ .+.|+.+|=-+|+-- -...| |. + ....+.+....+..+|+.+|
T Consensus 239 GAD~vMVKPal~--YLDIi~~vk~~~~~P~aaYqVSGEYAMikaAa~~G-wi-D-~~~~vlEsl~~~kRAGAd~I 308 (323)
T 1l6s_A 239 GADCLMVKPAGA--YLDIVRELRERTELPIGAYQVSGEYAMIKFAALAG-AI-D-EEKVVLESLGSIKRAGADLI 308 (323)
T ss_dssp TCSBEEEESCTT--CHHHHHHHHTTCSSCEEEEECHHHHHHHHHHHHTT-SS-C-HHHHHHHHHHHHHHTTCSEE
T ss_pred CCceEEEecCcc--hhHHHHHHHHhcCCCeEEEEcCcHHHHHHHHHHcC-Cc-c-HHHHHHHHHHHHHhcCCCEE
Confidence 556677765444 345555554 589999999888511 11234 72 1 12346777778889998876
No 112
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=68.30 E-value=1.2e+02 Score=31.75 Aligned_cols=225 Identities=13% Similarity=0.112 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHhcchhhcccccCChhc-hHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEE--ec
Q psy13907 315 QAVIDTHRDYVRAGCDIVTTNTYQASVEG-FVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAG--SL 391 (698)
Q Consensus 315 e~V~~iH~~yl~AGAdII~TNTf~as~~~-l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAG--si 391 (698)
|.+.+.-++-++.|-.-|.- |...+.. .++..|-....-..+...|++..|++.. ..+|.. ++
T Consensus 69 d~l~~~~~~~~~lGi~~v~L--Fgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~p------------dl~VitDvcL 134 (342)
T 1h7n_A 69 NRLKDYLKPLVAKGLRSVIL--FGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFP------------ELYIICDVCL 134 (342)
T ss_dssp HHHHHHHHHHHHTTCCEEEE--EEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCT------------TSEEEEEECS
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecccCccCCCCccccccCCCCChHHHHHHHHHHHCC------------CeEEEEeeec
Confidence 44555667778888764433 2221110 0111121000112367777777666532 234443 57
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHh--c-CCCeEEEEEEe
Q psy13907 392 GSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE--Y-PGLKAWISFSC 468 (698)
Q Consensus 392 GP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~--~-~~~Pv~iS~t~ 468 (698)
-||...=+.|.-.. .+.+.-|+-.+.+.+|+-...++|+|++.-=-|-|- ...++..++.+ + .+.|+| |.+.
T Consensus 135 c~YT~HGHcGil~~---~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~~v~Im-sYsa 209 (342)
T 1h7n_A 135 CEYTSHGHCGVLYD---DGTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDG-RIRDIKRGLINANLAHKTFVL-SYAA 209 (342)
T ss_dssp TTTBTTCCSSCBCT---TSSBCHHHHHHHHHHHHHHHHHHTCSEEEECCCCTT-HHHHHHHHHHHTTCTTTCEEE-EEEE
T ss_pred ccccCCCceeEECC---CCcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHHCCCccCceEe-echH
Confidence 78775444553311 134889999999999999999999999999888877 46778888885 3 346765 7665
Q ss_pred cC-------------------CCc--cCCCCcHHHHHHHHHHhCCCCceEEEEcCCChhhhHHHHHHhc--C-CCCEEEe
Q psy13907 469 KD-------------------EKH--TCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAG--R-DVPLLCC 524 (698)
Q Consensus 469 ~~-------------------~g~--l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~--~-~~pl~~y 524 (698)
+- +.+ -++-..-.+++..+.....-+.+.|.|-=..| .+.+++.++ . +.|+.+|
T Consensus 210 KyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~--YLDIi~~vk~~~p~~P~aaY 287 (342)
T 1h7n_A 210 KFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTF--YLDIMRDASEICKDLPICAY 287 (342)
T ss_dssp EBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEESSGG--GHHHHHHHHHHTTTSCEEEE
T ss_pred HHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeEEEecCcc--HHHHHHHHHHhccCCCeEEE
Confidence 31 111 12222333555544322235667777766444 345555554 4 8999999
Q ss_pred cCCCCCc----CCCCcccccCCChhhHHHHHHHHHHcCCeEEe
Q psy13907 525 PNSGETF----DPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVG 563 (698)
Q Consensus 525 PNaG~~~----d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiG 563 (698)
=-+|+-- -...| |. + ....+.+.+..+.++|+.+|=
T Consensus 288 qVSGEYAMikaAa~~G-wi-D-~~~~v~Esl~~~kRAGAd~Ii 327 (342)
T 1h7n_A 288 HVSGEYAMLHAAAEKG-VV-D-LKTIAFESHQGFLRAGARLII 327 (342)
T ss_dssp ECHHHHHHHHHHHHTT-SS-C-HHHHHHHHHHHHHHTTCSEEE
T ss_pred EcCcHHHHHHHHHHcC-Cc-c-HHHHHHHHHHHHHhcCCCEEE
Confidence 9988511 11234 72 1 123467777788899988763
No 113
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=68.30 E-value=61 Score=33.15 Aligned_cols=137 Identities=11% Similarity=0.053 Sum_probs=83.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 484 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v 484 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++.+.+...- |+ ..+ .+.+..+++
T Consensus 16 ~iD~~----~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-vi-aGv--------g~~~t~~ai 81 (293)
T 1w3i_A 16 RIDKE----KLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-II-FQV--------GGLNLDDAI 81 (293)
T ss_dssp SBCHH----HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EE-EEC--------CCSCHHHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EE-Eec--------CCCCHHHHH
Confidence 46664 4566777788899998776 42 24566777888877764333 43 332 344677888
Q ss_pred HHHHHhCCCCceEEEEcC---CC---hhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHH
Q psy13907 485 RDVYAKNPAQLVAVGVNC---LA---PHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLD 556 (698)
Q Consensus 485 ~~~~~~~~~~~~~iGlNC---~~---p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~ 556 (698)
+........+.+++.+-. .. .+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+ .
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~-----~- 147 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTA-----TG---KDIDAKVAKE-----I- 147 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHH-----HS---CCCCHHHHHH-----H-
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchh-----hC---cCCCHHHHHh-----c-
Confidence 777554445677776654 23 355777777775 7899999976431 12 1456666555 1
Q ss_pred cCCeEEe--ecCCCchHHHHHHHh
Q psy13907 557 TGVKYVG--GCCRTNADDMKNVNQ 578 (698)
Q Consensus 557 ~G~~iiG--GCCGTtP~hI~al~~ 578 (698)
-||+| =+|| ...++.++.+
T Consensus 148 --pnIvgiKds~g-d~~~~~~~~~ 168 (293)
T 1w3i_A 148 --GCFTGVKDTIE-NIIHTLDYKR 168 (293)
T ss_dssp --CCEEEEEECCS-CHHHHHHHHH
T ss_pred --CCEEEEEeCCC-CHHHHHHHHh
Confidence 34555 2333 3566666654
No 114
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=67.97 E-value=47 Score=33.85 Aligned_cols=137 Identities=8% Similarity=0.046 Sum_probs=82.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 484 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v 484 (698)
.+++ +.++..++.+++.|||.|++ |. .-+..|-+.+++.+.+...- |++.. .+.+..+++
T Consensus 15 ~iD~----~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gv---------g~~~t~~ai 80 (286)
T 2r91_A 15 RLDP----ELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQV---------ASLNADEAI 80 (286)
T ss_dssp EECH----HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEEC---------CCSSHHHHH
T ss_pred ccCH----HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEee---------CCCCHHHHH
Confidence 4555 44566778888899999876 42 24566777777777754333 44322 334567777
Q ss_pred HHHHHhCCCCceEEEEcC---C---ChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHH
Q psy13907 485 RDVYAKNPAQLVAVGVNC---L---APHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLD 556 (698)
Q Consensus 485 ~~~~~~~~~~~~~iGlNC---~---~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~ 556 (698)
+........+.+++.+-. . ..+.+..+.+.+. .+.|+++|-+-+. .| .+.+++.+.+ .
T Consensus 81 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~-----tg---~~l~~~~~~~-----~- 146 (286)
T 2r91_A 81 ALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAA-----VG---RDVDARAAKE-----L- 146 (286)
T ss_dssp HHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHH-----HS---SCCCHHHHHH-----H-
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhh-----cC---CCCCHHHHHh-----c-
Confidence 766443335667777655 1 3355777777775 7899999976531 12 1456666655 2
Q ss_pred cCCeEEe--ecCCCchHHHHHHHh
Q psy13907 557 TGVKYVG--GCCRTNADDMKNVNQ 578 (698)
Q Consensus 557 ~G~~iiG--GCCGTtP~hI~al~~ 578 (698)
-||+| =+|| +..++..+.+
T Consensus 147 --pnivgiKds~g-d~~~~~~~~~ 167 (286)
T 2r91_A 147 --GCIRGVKDTNE-SLAHTLAYKR 167 (286)
T ss_dssp --SCEEEEEECCS-CHHHHHHHHH
T ss_pred --CCEEEEEeCCC-CHHHHHHHHh
Confidence 34555 2333 3566666655
No 115
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=67.55 E-value=58 Score=33.08 Aligned_cols=162 Identities=12% Similarity=0.077 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHH----------HHHHHHHHHHHHhhccCCccCCCC
Q psy13907 315 QAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIR----------DAVKYVKEAIALEEKRDPAIASRH 384 (698)
Q Consensus 315 e~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~----------~av~lAr~A~~~~~~~~~~~~~~~ 384 (698)
+.-.++-+...++|||+|+-.-.-..| ++| |- -....+. ...++.++.+..+. .-|
T Consensus 32 ~~~~~~~~~l~~~GaD~iElgiPfSDP--~aD--Gp---~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~-------~~P 97 (267)
T 3vnd_A 32 ELSLKIIQTLVDNGADALELGFPFSDP--LAD--GP---VIQGANLRSLAAGTTSSDCFDIITKVRAQHP-------DMP 97 (267)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCC--TTC--CH---HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-------TCC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCC--CCC--CH---HHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-------CCC
Confidence 667778888999999999877443333 121 21 1222222 22556666665421 234
Q ss_pred cEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEE
Q psy13907 385 VRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWI 464 (698)
Q Consensus 385 ~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~i 464 (698)
+.+-+-..|. + ..-...-++.+.++|||.+++=..|. .|......+++++ ++..+.
T Consensus 98 ivlm~Y~npv---~-------------------~~g~e~f~~~~~~aGvdgvii~Dlp~-ee~~~~~~~~~~~-gl~~i~ 153 (267)
T 3vnd_A 98 IGLLLYANLV---F-------------------ANGIDEFYTKAQAAGVDSVLIADVPV-EESAPFSKAAKAH-GIAPIF 153 (267)
T ss_dssp EEEEECHHHH---H-------------------HHCHHHHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHT-TCEEEC
T ss_pred EEEEecCcHH---H-------------------HhhHHHHHHHHHHcCCCEEEeCCCCH-hhHHHHHHHHHHc-CCeEEE
Confidence 4333322221 0 00123445667788999998866664 5777788888874 554322
Q ss_pred EEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC-CCh-----hhhHHHHHHhc--CCCCEEE
Q psy13907 465 SFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC-LAP-----HYVESLLTSAG--RDVPLLC 523 (698)
Q Consensus 465 S~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC-~~p-----~~~~~~l~~l~--~~~pl~~ 523 (698)
.+ .+ -++. +-++.+.+....-+-.+.+++ +|. ..+..+++.++ .+.|+.+
T Consensus 154 li--aP------~t~~-eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 154 IA--PP------NADA-DTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp EE--CT------TCCH-HHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEE
T ss_pred EE--CC------CCCH-HHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 22 11 1122 333434332111233335666 543 23566777776 5677755
No 116
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=67.47 E-value=21 Score=39.79 Aligned_cols=120 Identities=19% Similarity=0.229 Sum_probs=68.9
Q ss_pred hHHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCC
Q psy13907 314 RQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGS 393 (698)
Q Consensus 314 Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP 393 (698)
++..+. -+..+++|+|+|..++-+.+... ..++.++.++.+ + .-..|+|.++.
T Consensus 255 ~d~~er-a~aLveaGvd~I~Id~a~g~~~~------------------v~~~i~~i~~~~-------~-~~~vi~g~v~t 307 (511)
T 3usb_A 255 ADAMTR-IDALVKASVDAIVLDTAHGHSQG------------------VIDKVKEVRAKY-------P-SLNIIAGNVAT 307 (511)
T ss_dssp TTHHHH-HHHHHHTTCSEEEEECSCTTSHH------------------HHHHHHHHHHHC-------T-TSEEEEEEECS
T ss_pred cchHHH-HHHHHhhccceEEecccccchhh------------------hhhHHHHHHHhC-------C-CceEEeeeecc
Confidence 344443 34678999999998876533211 123445555554 1 12456665543
Q ss_pred cCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec----c-----------cCCHHHHHHHHHHHHhcC
Q psy13907 394 YGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE----T-----------LPAQEEAMVLAELIKEYP 458 (698)
Q Consensus 394 ~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~E----T-----------i~~~~Eakaa~~a~~~~~ 458 (698)
.+.++.+.++|+|.|.+- + .|+..-...+..++++ .
T Consensus 308 ----------------------------~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~-~ 358 (511)
T 3usb_A 308 ----------------------------AEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARK-H 358 (511)
T ss_dssp ----------------------------HHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHT-T
T ss_pred ----------------------------HHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHh-C
Confidence 144777888999999861 1 3444444455555555 3
Q ss_pred CCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC
Q psy13907 459 GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 502 (698)
Q Consensus 459 ~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC 502 (698)
++||+.++-+. +..++++++. .+..+|++-=
T Consensus 359 ~iPVIa~GGI~---------~~~di~kala----~GA~~V~vGs 389 (511)
T 3usb_A 359 GIPVIADGGIK---------YSGDMVKALA----AGAHVVMLGS 389 (511)
T ss_dssp TCCEEEESCCC---------SHHHHHHHHH----TTCSEEEEST
T ss_pred CCcEEEeCCCC---------CHHHHHHHHH----hCchhheecH
Confidence 69998766443 2446666663 3455555543
No 117
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=67.22 E-value=23 Score=36.57 Aligned_cols=143 Identities=11% Similarity=0.039 Sum_probs=85.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccc-CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ETi-~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.+++ +.++..++.+++.|||.|++ |.. -+..|-+.+++.+.+. .+.||++.... .+..+
T Consensus 21 ~iD~----~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~---------~~t~~ 87 (300)
T 3eb2_A 21 RVRA----DVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS---------TSVAD 87 (300)
T ss_dssp CBCH----HHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE---------SSHHH
T ss_pred CcCH----HHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC---------CCHHH
Confidence 4666 44567777888899999864 322 3567777777776653 35899887643 23566
Q ss_pred HHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+++........+.+++.+-. ...+.+..+.+.+. .+.|+++|-+-+. .| . +.+++.+.+. .
T Consensus 88 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~-----tg-~--~l~~~~~~~L----a 155 (300)
T 3eb2_A 88 AVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQF-----QR-S--DLTLDVIARL----A 155 (300)
T ss_dssp HHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTT-----CS-S--CCCHHHHHHH----H
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccc-----cC-C--CCCHHHHHHH----H
Confidence 66655432223455555543 24567888888876 7899999977542 22 1 4456544443 3
Q ss_pred HcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 556 DTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 556 ~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
+. -||+|= +|| +..++.++.+..
T Consensus 156 ~~-pnIvgiKdssg-d~~~~~~~~~~~ 180 (300)
T 3eb2_A 156 EH-PRIRYIKDAST-NTGRLLSIINRC 180 (300)
T ss_dssp TS-TTEEEEEECSS-BHHHHHHHHHHH
T ss_pred cC-CCEEEEEcCCC-CHHHHHHHHHHc
Confidence 22 355542 222 456666666543
No 118
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=67.13 E-value=3.7 Score=42.92 Aligned_cols=86 Identities=20% Similarity=0.157 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEE
Q psy13907 419 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 498 (698)
Q Consensus 419 ~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~i 498 (698)
+.-.++++++.++|+|.|++|.+++..+++.+.+++ +.|+++..+ ..|+++ .-+. +.|.+ .+-....+
T Consensus 175 ~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~----~~P~~~n~~--~~g~tp-~~~~----~eL~~-lGv~~v~~ 242 (305)
T 3ih1_A 175 DEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKV----NAPLLANMT--EFGKTP-YYSA----EEFAN-MGFQMVIY 242 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS----CSCBEEECC--TTSSSC-CCCH----HHHHH-TTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc----CCCEEEeec--CCCCCC-CCCH----HHHHH-cCCCEEEE
Confidence 334578999999999999999999999988877765 468865543 223322 1222 33432 23444555
Q ss_pred EEcCC--ChhhhHHHHHHhc
Q psy13907 499 GVNCL--APHYVESLLTSAG 516 (698)
Q Consensus 499 GlNC~--~p~~~~~~l~~l~ 516 (698)
|.-+. .-..|...++.+.
T Consensus 243 ~~~~~raa~~a~~~~~~~i~ 262 (305)
T 3ih1_A 243 PVTSLRVAAKAYENVFTLIK 262 (305)
T ss_dssp CSHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 55442 2233555555554
No 119
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=66.98 E-value=42 Score=35.68 Aligned_cols=117 Identities=9% Similarity=-0.066 Sum_probs=73.9
Q ss_pred EEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEe-----ccc-CCHHHHHHHHHHHHhc--
Q psy13907 386 RVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEY-- 457 (698)
Q Consensus 386 ~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~-----ETi-~~~~Eakaa~~a~~~~-- 457 (698)
.+..-+-|+.. .+.++++ .++..++.+++.|||.|++ |.. -+..|-+.+++.+.+.
T Consensus 63 i~~alvTPF~~------------dg~ID~~----al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~ 126 (360)
T 4dpp_A 63 VITAIKTPYLP------------DGRFDLE----AYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG 126 (360)
T ss_dssp EEEECCCCBCT------------TSSBCHH----HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCcCCC------------CCCcCHH----HHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC
Confidence 55556777642 1246664 5566777888899998887 422 2466766677665542
Q ss_pred CCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC-----CChhhhHHHHHHhcCCCCEEEecCC
Q psy13907 458 PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC-----LAPHYVESLLTSAGRDVPLLCCPNS 527 (698)
Q Consensus 458 ~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC-----~~p~~~~~~l~~l~~~~pl~~yPNa 527 (698)
.+.||++.. .+.+..++++........+++++.+-. ...+.+..+.+.+....|+++|-+-
T Consensus 127 grvpViaGv---------g~~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a~PiilYNiP 192 (360)
T 4dpp_A 127 GSIKVIGNT---------GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTIIYNVP 192 (360)
T ss_dssp TTSEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGGSCEEEEECH
T ss_pred CCCeEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCC
Confidence 357988654 234566777765433235566666654 2456677888887734799999754
No 120
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=66.92 E-value=17 Score=37.57 Aligned_cols=53 Identities=13% Similarity=0.058 Sum_probs=30.4
Q ss_pred CccEEeecCC-CCceeecCeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCce--EEEecccc
Q psy13907 223 EAPLKAKPNR-SLFETYHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKL--YLIDGGFS 285 (698)
Q Consensus 223 ~~~~~~~pna-g~p~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~--~i~dG~~g 285 (698)
+.|+.++++. |.|+..+... .|..--++.. ++|.+-. +.+.+.++ +|+|=|+|
T Consensus 146 ~~~vVlmh~~eG~p~tm~~~~---~y~dv~~ev~---~~l~~~i----~~a~~~Gi~~IilDPG~G 201 (294)
T 2dqw_A 146 GVAAVVMHMPVPDPATMMAHA---RYRDVVAEVK---AFLEAQA----RRALSAGVPQVVLDPGFG 201 (294)
T ss_dssp TCEEEEECCSSSCTTTGGGGC---CCSSHHHHHH---HHHHHHH----HHHHHTTCSCEEEECCTT
T ss_pred CCCEEEEcCCCCCCccccccC---ccccHHHHHH---HHHHHHH----HHHHHCCCCcEEEcCCCC
Confidence 7899999998 9988654322 2542222222 1333322 33345554 89997765
No 121
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=66.79 E-value=90 Score=34.98 Aligned_cols=96 Identities=8% Similarity=0.102 Sum_probs=63.8
Q ss_pred HHHHHHHhCCCCEEE-ecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHH---HHHHHHHHhCCCCceEE
Q psy13907 423 PRIEALIQGGIDLLA-IETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFG---LIARDVYAKNPAQLVAV 498 (698)
Q Consensus 423 ~qi~~L~~~GvDlll-~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~---~~v~~~~~~~~~~~~~i 498 (698)
.-++.+.++|+|.+- +-..+++.+++.++.++++. +..+-.++++.+. ...++. +.++.+.+ .++..|
T Consensus 121 ~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~-G~~v~~~i~~~~~----~~~~~e~~~~~a~~l~~---~Gad~I 192 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKA-GKHAQGTICYTIS----PVHTVEGYVKLAGQLLD---MGADSI 192 (539)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHT-TCEEEEEEECCCS----TTCCHHHHHHHHHHHHH---TTCSEE
T ss_pred HHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHC-CCeEEEEEEeeeC----CCCCHHHHHHHHHHHHH---cCCCEE
Confidence 345557789999874 44667788999999999874 5666556655442 223554 44444443 455556
Q ss_pred EEc----CCChhhhHHHHHHhc---C-CCCEEEecC
Q psy13907 499 GVN----CLAPHYVESLLTSAG---R-DVPLLCCPN 526 (698)
Q Consensus 499 GlN----C~~p~~~~~~l~~l~---~-~~pl~~yPN 526 (698)
.+- ...|..+..+++.+. . +.+|.++..
T Consensus 193 ~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~H 228 (539)
T 1rqb_A 193 ALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCH 228 (539)
T ss_dssp EEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEB
T ss_pred EeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeC
Confidence 553 356999999998886 3 688888764
No 122
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=66.71 E-value=7.8 Score=39.80 Aligned_cols=41 Identities=15% Similarity=0.175 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeE
Q psy13907 418 IDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKA 462 (698)
Q Consensus 418 ~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv 462 (698)
.+.-.++++++.++|+|.|++|.+++..+++.+.+.++ .|+
T Consensus 167 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~----~P~ 207 (275)
T 2ze3_A 167 LAETVRRGQAYADAGADGIFVPLALQSQDIRALADALR----VPL 207 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHCS----SCE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhcC----CCE
Confidence 34455789999999999999999999999998877653 676
No 123
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=66.60 E-value=8.6 Score=37.92 Aligned_cols=138 Identities=13% Similarity=0.087 Sum_probs=73.5
Q ss_pred HHHHHHHHHhCCCCEEEeccc-----CCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCc
Q psy13907 421 HRPRIEALIQGGIDLLAIETL-----PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQL 495 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi-----~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~ 495 (698)
..+.++.+.++|+|.|-+=++ +.... ..+..+++..++|+++..-+. +..+ ++.+.+ .+.
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~ipv~v~ggi~---------~~~~-~~~~l~---~Ga 97 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNH--ELLAEVVGKLDVQVELSGGIR---------DDES-LAAALA---TGC 97 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH--HHHHHHHHHCSSEEEEESSCC---------SHHH-HHHHHH---TTC
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChH--HHHHHHHHhcCCcEEEECCCC---------CHHH-HHHHHH---cCC
Confidence 345667788899999987542 22222 445555555689998865443 2444 444433 344
Q ss_pred eEEEEcC---CChhhhHHHHHHhcCCCCEEEecC----CCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEEe-----
Q psy13907 496 VAVGVNC---LAPHYVESLLTSAGRDVPLLCCPN----SGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVG----- 563 (698)
Q Consensus 496 ~~iGlNC---~~p~~~~~~l~~l~~~~pl~~yPN----aG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiG----- 563 (698)
+.|.+.. ..|+.+..+++.++...-+++-+. .+... .. .|. .......+.++.+.+.|+..|.
T Consensus 98 d~V~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~--~~-g~~--~~~~~~~e~~~~~~~~G~~~i~~~~~~ 172 (244)
T 2y88_A 98 ARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLR--GR-GWE--TDGGDLWDVLERLDSEGCSRFVVTDIT 172 (244)
T ss_dssp SEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEE--EG-GGT--EEEEEHHHHHHHHHHTTCCCEEEEETT
T ss_pred CEEEECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEE--EC-Ccc--CCCCCHHHHHHHHHhCCCCEEEEEecC
Confidence 5555555 367777777777652222333322 22111 12 352 2112455566666677765443
Q ss_pred --ec-CCCchHHHHHHHh
Q psy13907 564 --GC-CRTNADDMKNVNQ 578 (698)
Q Consensus 564 --GC-CGTtP~hI~al~~ 578 (698)
|. -|...+.++.+++
T Consensus 173 ~~~~~~g~~~~~~~~l~~ 190 (244)
T 2y88_A 173 KDGTLGGPNLDLLAGVAD 190 (244)
T ss_dssp TTTTTSCCCHHHHHHHHT
T ss_pred CccccCCCCHHHHHHHHH
Confidence 22 2455667776664
No 124
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=66.57 E-value=4 Score=42.33 Aligned_cols=43 Identities=14% Similarity=0.148 Sum_probs=35.4
Q ss_pred HHHHHHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcCCCeEEEE
Q psy13907 421 HRPRIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYPGLKAWIS 465 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ET-i~~~~Eakaa~~a~~~~~~~Pv~iS 465 (698)
-.++++++.++|+|.|++|. +++..+++.+.+.+. ...|+++.
T Consensus 168 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~--~~vP~i~n 211 (290)
T 2hjp_A 168 AVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWP--GKVPLVLV 211 (290)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC--CSSCEEEC
T ss_pred HHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC--CCCCEEEe
Confidence 44788999999999999999 999999988887764 23787653
No 125
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=66.55 E-value=45 Score=34.07 Aligned_cols=115 Identities=12% Similarity=0.061 Sum_probs=63.8
Q ss_pred HHHHHHHhCCCCEEEecccCCHH---H----------------------HHHHHHH---HH-hc-CCCeEEEEEEecCCC
Q psy13907 423 PRIEALIQGGIDLLAIETLPAQE---E----------------------AMVLAEL---IK-EY-PGLKAWISFSCKDEK 472 (698)
Q Consensus 423 ~qi~~L~~~GvDlll~ETi~~~~---E----------------------akaa~~a---~~-~~-~~~Pv~iS~t~~~~g 472 (698)
+.++.+.+.|+.++..+|++.-. + ....++- .+ .. .+.|+++++.
T Consensus 27 ~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~----- 101 (311)
T 1jub_A 27 EDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIA----- 101 (311)
T ss_dssp HHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSSSCCEEEEC-----
T ss_pred HHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEcC-----
Confidence 33455677899999888876431 0 1111121 22 22 1678888874
Q ss_pred ccCCCCcHH---HHHHHHHHhCCCCce-EEEEcCC------------ChhhhHHHHHHhc--CCCCEEEecCCCCCcCCC
Q psy13907 473 HTCHGDKFG---LIARDVYAKNPAQLV-AVGVNCL------------APHYVESLLTSAG--RDVPLLCCPNSGETFDPG 534 (698)
Q Consensus 473 ~l~~G~~l~---~~v~~~~~~~~~~~~-~iGlNC~------------~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~ 534 (698)
|.+.. ++++.+.+ .+.+ .|=+|+. .++.+..+++.+. .+.|+++.-..+
T Consensus 102 ----g~~~~~~~~~a~~~~~---~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~------ 168 (311)
T 1jub_A 102 ----GMSAAENIAMLKKIQE---SDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY------ 168 (311)
T ss_dssp ----CSSHHHHHHHHHHHHH---SCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC------
T ss_pred ----CCCHHHHHHHHHHHHh---cCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC------
Confidence 34444 44555433 3344 4545542 4455667777776 467888764321
Q ss_pred CcccccCCChhhHHHHHHHHHHcCCeEE
Q psy13907 535 QRIWMNKDSVPSVDTYVPRWLDTGVKYV 562 (698)
Q Consensus 535 ~g~~~~~~~p~~~a~~~~~~~~~G~~ii 562 (698)
| +.+++.+.++...+.|+..|
T Consensus 169 ---~----~~~~~~~~a~~~~~~G~d~i 189 (311)
T 1jub_A 169 ---F----DLVHFDIMAEILNQFPLTYV 189 (311)
T ss_dssp ---C----SHHHHHHHHHHHTTSCCCEE
T ss_pred ---C----CHHHHHHHHHHHHHcCCcEE
Confidence 1 34456666777777776543
No 126
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=66.38 E-value=50 Score=34.33 Aligned_cols=145 Identities=14% Similarity=0.133 Sum_probs=86.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-ccc-----CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-ETL-----PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-ETi-----~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
.+++ +.++..++.+++.|||.|++ -|. -+..|-+.+++.+.+. .+.||++.. .+.+..+
T Consensus 28 ~iD~----~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 94 (318)
T 3qfe_A 28 TLDL----ASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV---------GAHSTRQ 94 (318)
T ss_dssp EECH----HHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC---------CCSSHHH
T ss_pred CCCH----HHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHH
Confidence 4566 44567788888999998765 222 3567777777776643 458988754 2345667
Q ss_pred HHHHHHHhCCCCceEEEEcC---C----ChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHH
Q psy13907 483 IARDVYAKNPAQLVAVGVNC---L----APHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPR 553 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC---~----~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~ 553 (698)
+++........+.+++.+-. . ..+.+..+.+.+. .+.|+++|-+-+.. .| . +.+++.+.+.
T Consensus 95 ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t----~g-~--~l~~~~~~~L--- 164 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVC----NG-I--DLDSDMITTI--- 164 (318)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC---------C--CCCHHHHHHH---
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCccc----CC-C--CCCHHHHHHH---
Confidence 77765432224556666644 1 2456777777775 78999999776421 02 1 4556555443
Q ss_pred HHHcCCeEEee--cCCCchHHHHHHHhcc
Q psy13907 554 WLDTGVKYVGG--CCRTNADDMKNVNQVP 580 (698)
Q Consensus 554 ~~~~G~~iiGG--CCGTtP~hI~al~~~v 580 (698)
.+.--||+|= +|| ...++..+.+.+
T Consensus 165 -a~~~pnIvgiKdssg-d~~~~~~~~~~~ 191 (318)
T 3qfe_A 165 -ARKNPNVVGVKLTCA-SVGKITRLAATL 191 (318)
T ss_dssp -HHHCTTEEEEEESSC-CHHHHHHHHHHS
T ss_pred -HhhCCCEEEEEeCCC-CHHHHHHHHHhc
Confidence 3322355552 233 466777766544
No 127
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=66.03 E-value=11 Score=38.88 Aligned_cols=96 Identities=10% Similarity=0.070 Sum_probs=52.4
Q ss_pred HHHHhCCCCEEEEecCcCHH-------------------------HHHHHHHHHHh---cCCCeEEEEEEEcCCCccCCC
Q psy13907 88 EALIQGGIDLLAIETLPAQE-------------------------EAMVLAELIKE---YPGLKAWISFSCKDEKHTCHG 139 (698)
Q Consensus 88 ~~l~~~GVD~il~ETi~~l~-------------------------Ea~aa~~a~~~---~~~~Pv~iSft~~~~g~l~~G 139 (698)
+.+.+.|+.++..||++.-. .....++.+++ ..+.|+++++. |
T Consensus 32 ~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~---------g 102 (314)
T 2e6f_A 32 RCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSIS---------G 102 (314)
T ss_dssp HHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEEC---------C
T ss_pred HHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeC---------C
Confidence 33567899999888754321 11222222332 24689998873 4
Q ss_pred CCHHHHHHHHHhhCCCCce---EEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHc
Q psy13907 140 DKFGLIARDVYAKNPAQLV---AVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 140 ~~~~~~~~~l~~~~~~~~~---aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~ 210 (698)
.++++..+.+......++| +|=+|+++|.. .. ...+-..|+.+.++++++++.
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g-----------------~~~~g~~~~~~~~ii~~vr~~ 158 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PG-----------------KPQVAYDFEAMRTYLQQVSLA 158 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TT-----------------CCCGGGSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CC-----------------chhhcCCHHHHHHHHHHHHHh
Confidence 4555544433221224678 89999987542 00 011122466677777777665
No 128
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=65.95 E-value=13 Score=39.36 Aligned_cols=64 Identities=13% Similarity=0.008 Sum_probs=38.2
Q ss_pred CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCce-EEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChH
Q psy13907 120 PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLV-AVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPI 198 (698)
Q Consensus 120 ~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~-aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~ 198 (698)
.+.|+++|+. |.++++.++.+......+.+ +|=|||+.|..- ....+-..|+
T Consensus 127 ~~~pvivsI~---------g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~------------------G~~~l~~~~e 179 (345)
T 3oix_A 127 DSKNHFLSLV---------GMSPEETHTILXMVEASKYQGLVELNLSCPNVP------------------GXPQIAYDFE 179 (345)
T ss_dssp TCCCCEEEEC---------CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST------------------TCCCGGGCHH
T ss_pred CCCCEEEEec---------CCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC------------------CchhhcCCHH
Confidence 5789999984 55666555544322223444 899999876431 0011123677
Q ss_pred HHHHHHHHHHHc
Q psy13907 199 QLLSIELELAAA 210 (698)
Q Consensus 199 ~~~~~~~~l~~~ 210 (698)
.+.++++.+.+.
T Consensus 180 ~l~~il~av~~~ 191 (345)
T 3oix_A 180 TTDQILSEVFTY 191 (345)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHHHH
Confidence 888888877665
No 129
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=65.83 E-value=91 Score=31.85 Aligned_cols=92 Identities=13% Similarity=0.197 Sum_probs=53.1
Q ss_pred HHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecC------CCccCCCCc--HHHHHHHHHHhCCCCceE
Q psy13907 426 EALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKD------EKHTCHGDK--FGLIARDVYAKNPAQLVA 497 (698)
Q Consensus 426 ~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~------~g~l~~G~~--l~~~v~~~~~~~~~~~~~ 497 (698)
..|.++|++.+-+|--. |...-++++.+ .++|||--+-++. ++...-|++ ..++++.......++.++
T Consensus 102 ~rl~kaGa~aVklEdg~---e~~~~I~al~~-agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ 177 (275)
T 1o66_A 102 AELMAAGAHMVKLEGGV---WMAETTEFLQM-RGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAV 177 (275)
T ss_dssp HHHHHTTCSEEEEECSG---GGHHHHHHHHH-TTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHcCCcEEEECCcH---HHHHHHHHHHH-cCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcE
Confidence 34666999999999863 44555556665 4789985554332 122233444 334444443323478889
Q ss_pred EEEcCCChhhhHHHHHHhcCCCCEEE
Q psy13907 498 VGVNCLAPHYVESLLTSAGRDVPLLC 523 (698)
Q Consensus 498 iGlNC~~p~~~~~~l~~l~~~~pl~~ 523 (698)
|=+-|...+.+..+-+.+ ++|++-
T Consensus 178 ivlE~vp~~~a~~it~~l--~iP~ig 201 (275)
T 1o66_A 178 VLMECVLAELAKKVTETV--SCPTIG 201 (275)
T ss_dssp EEEESCCHHHHHHHHHHC--SSCEEE
T ss_pred EEEecCCHHHHHHHHHhC--CCCEEE
Confidence 999997666566555555 467654
No 130
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=65.76 E-value=8.1 Score=38.47 Aligned_cols=66 Identities=20% Similarity=0.140 Sum_probs=45.7
Q ss_pred HHHHHHHHHhCCCCEEEEecCc--CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEE
Q psy13907 83 HRPRIEALIQGGIDLLAIETLP--AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 160 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi~--~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aI 160 (698)
+.+|++.+.+.|+|++++-+-. +..+++..++.+++ .++++++... +.+++..... .|++.|
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~-~g~~v~~~v~-----------t~eea~~a~~----~Gad~I 153 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRL-HGLLAMADCS-----------TVNEGISCHQ----KGIEFI 153 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH-TTCEEEEECS-----------SHHHHHHHHH----TTCSEE
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHH-CCCEEEEecC-----------CHHHHHHHHh----CCCCEE
Confidence 3456777888999999887642 33566777888887 4788886542 4566655432 689999
Q ss_pred EEcC
Q psy13907 161 GVNC 164 (698)
Q Consensus 161 GiNC 164 (698)
|+|-
T Consensus 154 g~~~ 157 (229)
T 3q58_A 154 GTTL 157 (229)
T ss_dssp ECTT
T ss_pred EecC
Confidence 9864
No 131
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=65.73 E-value=55 Score=33.95 Aligned_cols=136 Identities=9% Similarity=0.022 Sum_probs=83.6
Q ss_pred HHHHHHHhCCCCEEEecccC--------------CHHHHH----HHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHH
Q psy13907 423 PRIEALIQGGIDLLAIETLP--------------AQEEAM----VLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 484 (698)
Q Consensus 423 ~qi~~L~~~GvDlll~ETi~--------------~~~Eak----aa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v 484 (698)
+-++.|.++|++.+-+|-.. +..|.. +++.+.++. +.+++|---.+. .. +..+.+++
T Consensus 99 ~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~-~~d~~I~ARTDa--~~--~~gldeAi 173 (302)
T 3fa4_A 99 RTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRI-GSDIVVIARTDS--LQ--THGYEESV 173 (302)
T ss_dssp HHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHH-TCCCEEEEEECC--HH--HHCHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhc-CCCEEEEEEecc--cc--cCCHHHHH
Confidence 55788889999999999653 445544 444444332 456666665432 22 23588999
Q ss_pred HHHHHhCCCCceEEEEcC-CChhhhHHHHHHhcCCCCEEE--ecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeE
Q psy13907 485 RDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVPLLC--CPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKY 561 (698)
Q Consensus 485 ~~~~~~~~~~~~~iGlNC-~~p~~~~~~l~~l~~~~pl~~--yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~i 561 (698)
+.......++.++|-+-+ ..+++++.+.+.+. +.|+.+ .+....|. .+. .++.+.|+++
T Consensus 174 ~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~----------~~~-------~eL~~lGv~~ 235 (302)
T 3fa4_A 174 ARLRAARDAGADVGFLEGITSREMARQVIQDLA-GWPLLLNMVEHGATPS----------ISA-------AEAKEMGFRI 235 (302)
T ss_dssp HHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT-TSCEEEECCTTSSSCC----------CCH-------HHHHHHTCSE
T ss_pred HHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc-CCceeEEEecCCCCCC----------CCH-------HHHHHcCCCE
Confidence 888654457889999988 67888998888875 356644 22221111 122 4566679777
Q ss_pred EeecCCCchHHHHHHHhccc
Q psy13907 562 VGGCCRTNADDMKNVNQVPV 581 (698)
Q Consensus 562 iGGCCGTtP~hI~al~~~v~ 581 (698)
|=.-+..--.-++++.+.++
T Consensus 236 v~~~~~~~raa~~A~~~~~~ 255 (302)
T 3fa4_A 236 IIFPFAALGPAVAAMREAME 255 (302)
T ss_dssp EEETTTTHHHHHHHHHHHHH
T ss_pred EEEchHHHHHHHHHHHHHHH
Confidence 65544444445555555544
No 132
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=65.41 E-value=52 Score=36.19 Aligned_cols=95 Identities=9% Similarity=0.120 Sum_probs=61.6
Q ss_pred HHHHHHHhCCCCEEEEe-cCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEc
Q psy13907 85 PRIEALIQGGIDLLAIE-TLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 163 (698)
Q Consensus 85 ~qi~~l~~~GVD~il~E-Ti~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiN 163 (698)
.-++...+.|+|.|-+= ..+++..++.+++++++ .++.+.+++++.++.+ .+++.+++.+......+++.|.+-
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~-~G~~v~~~i~~~~~~~----~~~e~~~~~a~~l~~~Gad~I~l~ 178 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKK-MGAHAQGTLCYTTSPV----HNLQTWVDVAQQLAELGVDSIALK 178 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHH-TTCEEEEEEECCCCTT----CCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHH-CCCEEEEEEEeeeCCC----CCHHHHHHHHHHHHHCCCCEEEEc
Confidence 34555667899987643 56778889999999998 5777777776554422 245544443322223677776664
Q ss_pred CCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHc
Q psy13907 164 CLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 164 C~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~ 210 (698)
=+. |.. -|.++.++++.+.+.
T Consensus 179 DT~------------------------G~~--~P~~v~~lv~~l~~~ 199 (464)
T 2nx9_A 179 DMA------------------------GIL--TPYAAEELVSTLKKQ 199 (464)
T ss_dssp ETT------------------------SCC--CHHHHHHHHHHHHHH
T ss_pred CCC------------------------CCc--CHHHHHHHHHHHHHh
Confidence 333 111 499999999999876
No 133
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=65.21 E-value=88 Score=32.34 Aligned_cols=140 Identities=14% Similarity=0.097 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCEE-Eeccc---CCHHH--------HHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 415 QELIDYHRPRIEALIQGGIDLL-AIETL---PAQEE--------AMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 415 del~~~y~~qi~~L~~~GvDll-l~ETi---~~~~E--------akaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
+.+.+...+.++.++++|+|.+ +++.. -+... .+.++..+++..+.|+ +-|++ |. ..
T Consensus 175 ~~i~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~g~~~-i~~~~--------g~--~~ 243 (338)
T 2eja_A 175 DILTETVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDFSDTPV-IYFFR--------GS--SS 243 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHCCCCE-EEEES--------SH--HH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhcCCCCE-EEEcC--------Cc--HH
Confidence 3344455566777788999987 45654 23333 2335556664335774 34542 22 23
Q ss_pred HHHHHHHhCCCCceEEEEcC-CChhhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHc-CC-
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDT-GV- 559 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-~~p~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~-G~- 559 (698)
.++.+.+ .+.++++++- ..+..++.. + -+.++-|- |+ . .. ..++++..+.+++.++. |.
T Consensus 244 ~l~~l~~---~g~d~~~~d~~~dl~~~~~~---~----~~~l~Gn~----dp--~-~l-~gt~e~i~~~v~~~l~~~g~~ 305 (338)
T 2eja_A 244 FIDLAVD---YRADALSVDWSVDIPELFKI---Y----DKGFQGNL----EP--A-VL-YASEEVIEEKTLGLLRRIPVK 305 (338)
T ss_dssp HHHHHTT---SCCSEEECCTTSCHHHHHHH---C----CSEEECCB----CG--G-GG-GSCHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHH---cCCCEEEeCCCCCHHHHHHh---C----CeEEEECC----CH--H-Hh-cCCHHHHHHHHHHHHHHhCCC
Confidence 4455532 4567788875 455544443 2 23344443 11 1 11 35789999999999875 53
Q ss_pred --eEEeecCC----CchHHHHHHHhccccC
Q psy13907 560 --KYVGGCCR----TNADDMKNVNQVPVKF 583 (698)
Q Consensus 560 --~iiGGCCG----TtP~hI~al~~~v~~~ 583 (698)
-|++--|| |.|++++++.++++++
T Consensus 306 ~g~I~~~g~gi~~~~p~en~~a~v~~v~~~ 335 (338)
T 2eja_A 306 TRYVFNLGHGLAPDMELEKVKYLVDLVKSF 335 (338)
T ss_dssp SSEEBCBSSCCCTTSCHHHHHHHHHHHHTC
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 57777776 6889999999999875
No 134
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=64.44 E-value=9.2 Score=38.09 Aligned_cols=66 Identities=15% Similarity=0.070 Sum_probs=45.5
Q ss_pred HHHHHHHHhCCCCEEEEecCc--CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEE
Q psy13907 84 RPRIEALIQGGIDLLAIETLP--AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVG 161 (698)
Q Consensus 84 ~~qi~~l~~~GVD~il~ETi~--~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIG 161 (698)
.+|++.+.+.|+|++++-+-. +..+++..++.+++ .+++++++.. +.+++..... .+++.||
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~-~g~~v~~~v~-----------t~eea~~a~~----~Gad~Ig 154 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHH-HHLLTMADCS-----------SVDDGLACQR----LGADIIG 154 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH-TTCEEEEECC-----------SHHHHHHHHH----TTCSEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHH-CCCEEEEeCC-----------CHHHHHHHHh----CCCCEEE
Confidence 456777788999999987652 33566777888887 4788886542 3555554332 6899999
Q ss_pred EcCC
Q psy13907 162 VNCL 165 (698)
Q Consensus 162 iNC~ 165 (698)
+|-.
T Consensus 155 ~~~~ 158 (232)
T 3igs_A 155 TTMS 158 (232)
T ss_dssp CTTT
T ss_pred EcCc
Confidence 8643
No 135
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=64.42 E-value=87 Score=32.06 Aligned_cols=108 Identities=16% Similarity=0.163 Sum_probs=66.5
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCccCCCCeEEEEecCCcCCCCCCCCCccCCCCCCCCHHHHHHHHHHHHHH
Q psy13907 10 LGLSEDQSVQLIRDAVKYVKEAIVLEEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEA 89 (698)
Q Consensus 10 ~gl~~~~~~eln~~Av~lAreA~~~~~~~~~~~~~~~v~VAGSIGP~g~~l~~gseY~g~y~~~~s~eel~~~~~~qi~~ 89 (698)
++.+.++..+..+..++.|++. ...|-+.|+-.... ||.+ ..+.+ +..+.++.
T Consensus 115 ~~~s~ee~l~~~~~~v~~a~~~--------------G~~V~~~l~~~~~~-----e~~~----~~~~~----~~~~~~~~ 167 (302)
T 2ftp_A 115 INCSIKDSLERFVPVLEAARQH--------------QVRVRGYISCVLGC-----PYDG----DVDPR----QVAWVARE 167 (302)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHT--------------TCEEEEEEECTTCB-----TTTB----CCCHH----HHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHC--------------CCeEEEEEEEEeeC-----CcCC----CCCHH----HHHHHHHH
Confidence 4566555556666666666542 34566666654221 2333 23444 45556666
Q ss_pred HHhCCCCEEEEec-C--cCHHHHHHHHHHHHhcC-CCeEEEEEEEcCCCccCCCCCHHHHHHHHH
Q psy13907 90 LIQGGIDLLAIET-L--PAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVY 150 (698)
Q Consensus 90 l~~~GVD~il~ET-i--~~l~Ea~aa~~a~~~~~-~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~ 150 (698)
+.+.|+|.|.+=+ . ....+....++.+++.. ++| +++.+.++ .|.....+...+.
T Consensus 168 ~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~--l~~H~Hn~----~Gla~An~laAv~ 226 (302)
T 2ftp_A 168 LQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRER--LAGHFHDT----YGQALANIYASLL 226 (302)
T ss_dssp HHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGG--EEEEEBCT----TSCHHHHHHHHHH
T ss_pred HHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEEeCCC----ccHHHHHHHHHHH
Confidence 7788999987653 2 36777888888888642 345 56666665 5777888887775
No 136
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=64.25 E-value=52 Score=33.55 Aligned_cols=45 Identities=24% Similarity=0.422 Sum_probs=31.3
Q ss_pred HHHHHHHHhCCCCEEEE---------ecCcCHHHHHHHHHHHHhcCCCeEEEEE
Q psy13907 84 RPRIEALIQGGIDLLAI---------ETLPAQEEAMVLAELIKEYPGLKAWISF 128 (698)
Q Consensus 84 ~~qi~~l~~~GVD~il~---------ETi~~l~Ea~aa~~a~~~~~~~Pv~iSf 128 (698)
..+++.+++.|+|+|=+ +.++.-+|++-++-+++.+....+.+|+
T Consensus 33 ~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSI 86 (270)
T 4hb7_A 33 INRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISV 86 (270)
T ss_dssp HHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred HHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEE
Confidence 34677788899999876 4567777877777666655333455665
No 137
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=63.76 E-value=1.3e+02 Score=30.60 Aligned_cols=169 Identities=19% Similarity=0.189 Sum_probs=89.2
Q ss_pred CcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---------cCCHHHHHHHHHHH
Q psy13907 384 HVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIET---------LPAQEEAMVLAELI 454 (698)
Q Consensus 384 ~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ET---------i~~~~Eakaa~~a~ 454 (698)
+.+|-|-+=-|..|++||.. | .+.+++. ++++.+++.|+|+|=+-. ++.-.|.+.++.++
T Consensus 5 ~~~imgilN~TpDSFsdgg~----~---~~~~~a~----~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi 73 (280)
T 1eye_A 5 PVQVMGVLNVTDDSFSDGGC----Y---LDLDDAV----KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVV 73 (280)
T ss_dssp CCEEEEEEECSCCTTCSSCC----C---CSHHHHH----HHHHHHHHTTCSEEEEECC--------------HHHHHHHH
T ss_pred CcEEEEEEeCCCCCcCCCcc----c---CCHHHHH----HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHH
Confidence 45788998888888988632 2 4555554 566777889999985543 22255666555555
Q ss_pred HhcC--CCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcCC-ChhhhHHHHHHhcCCCCEEEecCCCCCc
Q psy13907 455 KEYP--GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCL-APHYVESLLTSAGRDVPLLCCPNSGETF 531 (698)
Q Consensus 455 ~~~~--~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~-~p~~~~~~l~~l~~~~pl~~yPNaG~~~ 531 (698)
+... +.|+ |+-..+ .+++++..+. +. .+.--+|-. .-+.|.+++++. +.|+++.++.|.|.
T Consensus 74 ~~l~~~~~pi--SIDT~~----------~~va~aAl~a-Ga-~iINdvsg~~~d~~m~~~~a~~--~~~vVlmh~~G~p~ 137 (280)
T 1eye_A 74 KELAAQGITV--SIDTMR----------ADVARAALQN-GA-QMVNDVSGGRADPAMGPLLAEA--DVPWVLMHWRAVSA 137 (280)
T ss_dssp HHHHHTTCCE--EEECSC----------HHHHHHHHHT-TC-CEEEETTTTSSCTTHHHHHHHH--TCCEEEECCCCSCT
T ss_pred HHhhcCCCEE--EEeCCC----------HHHHHHHHHc-CC-CEEEECCCCCCCHHHHHHHHHh--CCeEEEEcCCCCCc
Confidence 5322 5554 552211 1344444332 22 231223332 134566666666 68999999988765
Q ss_pred CCCCc--ccccCCC----hhhHHHHHHHHHHcCCe---EE---eecCCCchHHHHHHHhccc
Q psy13907 532 DPGQR--IWMNKDS----VPSVDTYVPRWLDTGVK---YV---GGCCRTNADDMKNVNQVPV 581 (698)
Q Consensus 532 d~~~g--~~~~~~~----p~~~a~~~~~~~~~G~~---ii---GGCCGTtP~hI~al~~~v~ 581 (698)
+.... .| ..- -+.+.+.+....+.|+. |+ |=--+-+.+|=-.+-+.++
T Consensus 138 tm~~~~~~y--~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~ 197 (280)
T 1eye_A 138 DTPHVPVRY--GNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALP 197 (280)
T ss_dssp TCTTSCCCC--SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHH
T ss_pred chhhcCcch--hHHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHHH
Confidence 32211 11 110 22344556666788975 54 3113446655444444443
No 138
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=63.68 E-value=62 Score=32.92 Aligned_cols=133 Identities=14% Similarity=0.125 Sum_probs=77.6
Q ss_pred HHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCCcCCCCCCC
Q psy13907 322 RDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDG 401 (698)
Q Consensus 322 ~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP~~~~l~~~ 401 (698)
+..+++|.+.|.... .+|.......++++.++..+..+.+++.||+. ...|-+.++-...
T Consensus 86 ~~a~~~G~~~V~i~~-~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~--------------G~~V~~~l~~~~~----- 145 (295)
T 1ydn_A 86 EAAAAAHADEIAVFI-SASEGFSKANINCTIAESIERLSPVIGAAIND--------------GLAIRGYVSCVVE----- 145 (295)
T ss_dssp HHHHHTTCSEEEEEE-ESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHT--------------TCEEEEEEECSSE-----
T ss_pred HHHHHCCCCEEEEEE-ecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHc--------------CCeEEEEEEEEec-----
Confidence 456789999887642 34544443334666666666666666665543 1345555555321
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-c--cCCHHHHHHHHHHHHhcCC-CeEEEEEEecCCCccCCC
Q psy13907 402 SEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE-T--LPAQEEAMVLAELIKEYPG-LKAWISFSCKDEKHTCHG 477 (698)
Q Consensus 402 ~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~E-T--i~~~~Eakaa~~a~~~~~~-~Pv~iS~t~~~~g~l~~G 477 (698)
.||.+ ..+.+++. +.++.+.+.|+|.|.+= | +....+....+..+++... .|+ ++-+.+ -.|
T Consensus 146 ~e~~~----~~~~~~~~----~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l--~~H~Hn----~~G 211 (295)
T 1ydn_A 146 CPYDG----PVTPQAVA----SVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSL--AGHYHD----TGG 211 (295)
T ss_dssp ETTTE----ECCHHHHH----HHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGE--EEEEBC----TTS
T ss_pred CCcCC----CCCHHHHH----HHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeE--EEEECC----Ccc
Confidence 11111 24555544 45556777899998665 2 2456777788888876433 454 555555 467
Q ss_pred CcHHHHHHHHH
Q psy13907 478 DKFGLIARDVY 488 (698)
Q Consensus 478 ~~l~~~v~~~~ 488 (698)
..+..+..++.
T Consensus 212 la~an~l~Ai~ 222 (295)
T 1ydn_A 212 RALDNIRVSLE 222 (295)
T ss_dssp CHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 77777777663
No 139
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=63.41 E-value=27 Score=35.73 Aligned_cols=77 Identities=13% Similarity=0.041 Sum_probs=51.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEE-----ecC-cCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHH
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAI-----ETL-PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 146 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~-----ETi-~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~ 146 (698)
.++.+ .++..++.+++. ||.|++ |.. -+.+|=+.+++.+.+ .+|+++... +.+..+++
T Consensus 15 ~iD~~----~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~--rvpviaGvg---------~~~t~~ai 78 (283)
T 2pcq_A 15 RLDEE----AFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP--RKPFLVGLM---------EETLPQAE 78 (283)
T ss_dssp CBCHH----HHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC--SSCCEEEEC---------CSSHHHHH
T ss_pred CcCHH----HHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh--CCcEEEeCC---------CCCHHHHH
Confidence 45654 455567777778 888765 322 367788888887776 789997762 34566776
Q ss_pred HHHHhhCCCCceEEEEcCC
Q psy13907 147 RDVYAKNPAQLVAVGVNCL 165 (698)
Q Consensus 147 ~~l~~~~~~~~~aIGiNC~ 165 (698)
+..+.....|+|++.+-.-
T Consensus 79 ~la~~A~~~Gadavlv~~P 97 (283)
T 2pcq_A 79 GALLEAKAAGAMALLATPP 97 (283)
T ss_dssp HHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHhcCCCEEEecCC
Confidence 6543333468999888753
No 140
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=63.39 E-value=15 Score=37.96 Aligned_cols=159 Identities=11% Similarity=0.072 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----Eeccc--CCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHH
Q psy13907 413 TPQELIDYHRPRIEALIQGGIDLL-----AIETL--PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIAR 485 (698)
Q Consensus 413 t~del~~~y~~qi~~L~~~GvDll-----l~ETi--~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~ 485 (698)
+.+.+.++-+..++.+.+ -|..+ ++|.. .-+.+++..+..+++ .+.+|+.-+-+-| =|.|....++
T Consensus 41 ~~~~l~~f~~~ivd~l~~-~v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~-~g~~VflDlK~~D-----IpnTv~~~a~ 113 (290)
T 3r89_A 41 VSEALFSYNKEIIDQTYD-VCAIYKLQIAYYESYGIEGMIAYRDTLSYLRE-KDLLSIGDVKRSD-----IAASAKMYAK 113 (290)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHTTHHHHHHHHHHHHHHHHH-TTCCEEEEEEECC-----CHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCC-cceEEEecHHHHHhcCHHHHHHHHHHHHHHHH-CCCeEEEEecccC-----cHHHHHHHHH
Confidence 367888888999988865 34443 22321 112244445566666 4789988887766 3445556665
Q ss_pred HHHHhCCCCceEEEEcC-CChhhhHHHHHHhc-CC--CCEE-EecCCCCCcCCCCcccccCC-ChhhHHHHHHHHHHc--
Q psy13907 486 DVYAKNPAQLVAVGVNC-LAPHYVESLLTSAG-RD--VPLL-CCPNSGETFDPGQRIWMNKD-SVPSVDTYVPRWLDT-- 557 (698)
Q Consensus 486 ~~~~~~~~~~~~iGlNC-~~p~~~~~~l~~l~-~~--~pl~-~yPNaG~~~d~~~g~~~~~~-~p~~~a~~~~~~~~~-- 557 (698)
.+.+. ..+++.+-+++ .|.+.|.++++.+. .. ..+. ..-|.|... ...-.. .+. --+.+++.+.+|...
T Consensus 114 ~~~~~-~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kgv~vL~~tSn~g~~d-~q~~~~-~~g~l~~~V~~~a~~~~~~~~ 190 (290)
T 3r89_A 114 AHFEG-DFETDFITLNPYMGMDSIEPYEEYIEKGDKGVFVLLRTSNPGAKD-FEVLPV-DGEEFFYKVGDKMRELNEKYI 190 (290)
T ss_dssp HHHSG-GGCCSEEEECCTTCGGGTGGGHHHHHTTSCEEEEEEECCSGGGGT-TTTCEE-TTEETHHHHHHHHHHHHGGGC
T ss_pred HHhcc-ccCCCEEEEcccCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCHHH-Hhhccc-CCCCHHHHHHHHHHHHhhhcc
Confidence 55321 14578899999 78888888888765 22 2222 233333111 011000 011 123456667778642
Q ss_pred C---CeEEeecCCC-chHHHHHHHhccc
Q psy13907 558 G---VKYVGGCCRT-NADDMKNVNQVPV 581 (698)
Q Consensus 558 G---~~iiGGCCGT-tP~hI~al~~~v~ 581 (698)
| ...+|==||. -|+.++.|++.+.
T Consensus 191 g~~~~g~~GvVvgAT~p~e~~~iR~~~~ 218 (290)
T 3r89_A 191 GKSGFGPIGLVVGATHSEEVEKIRKRYD 218 (290)
T ss_dssp CTTSCEEEEEEECCCCHHHHHHHHHHTT
T ss_pred CCCCCCceEEEECCCChHHHHHHHHhCC
Confidence 3 3467777775 5999999998764
No 141
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=63.15 E-value=1.7e+02 Score=31.47 Aligned_cols=87 Identities=13% Similarity=0.200 Sum_probs=50.6
Q ss_pred CCHHHHH----HHHHHHHHHHHhCCCCEEEE----ecCc------CHHH----HHHHHHHHHhc-CCCeEEEEEEEcCCC
Q psy13907 74 TTPQELI----DYHRPRIEALIQGGIDLLAI----ETLP------AQEE----AMVLAELIKEY-PGLKAWISFSCKDEK 134 (698)
Q Consensus 74 ~s~eel~----~~~~~qi~~l~~~GVD~il~----ETi~------~l~E----a~aa~~a~~~~-~~~Pv~iSft~~~~g 134 (698)
.+.+++. ++-+..++.|.+.|++.-++ |+-. +.+. ++++++++|+. ++.+|++.++...+
T Consensus 130 ~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~- 208 (399)
T 1ur4_A 130 LNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPET- 208 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTS-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcc-
Confidence 4666554 34446777787888765444 4322 2333 55667777764 57788887754322
Q ss_pred ccCCCCCHHHHHHHHHhhCCCCceEEEEcCCC
Q psy13907 135 HTCHGDKFGLIARDVYAKNPAQLVAVGVNCLA 166 (698)
Q Consensus 135 ~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC~~ 166 (698)
-..+...+..+.. .....|.||+|+-.
T Consensus 209 ----~~~~~~~~d~l~~-~g~d~DvIG~syYp 235 (399)
T 1ur4_A 209 ----SGRYAWIAETLHR-HHVDYDVFASSYYP 235 (399)
T ss_dssp ----TTHHHHHHHHHHH-TTCCCSEEEEEECT
T ss_pred ----hHHHHHHHHHHHH-cCCCcCeEeEecCc
Confidence 1123334454433 23468999999853
No 142
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=62.63 E-value=48 Score=34.06 Aligned_cols=137 Identities=12% Similarity=0.089 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCC
Q psy13907 314 RQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGS 393 (698)
Q Consensus 314 Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP 393 (698)
++-|+...+.-..+|.+.|... ..+|.......++++.+++.+..+..++.||+. +.. |-+++.
T Consensus 79 ~~di~~a~~~~~~ag~~~v~i~-~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~------------g~~--v~~~~~- 142 (293)
T 3ewb_X 79 EGDIDRAEEALKDAVSPQIHIF-LATSDVHMEYKLKMSRAEVLASIKHHISYARQK------------FDV--VQFSPE- 142 (293)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEE-EECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTT------------CSC--EEEEEE-
T ss_pred HHHHHHHHHHHhhcCCCEEEEE-ecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhC------------CCE--EEEEec-
Confidence 4334444444444688876643 345555554445777777777777777666543 122 333221
Q ss_pred cCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-cc--CCHHHHHHHHHHHHhc-CCCe-EEEEEEe
Q psy13907 394 YGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE-TL--PAQEEAMVLAELIKEY-PGLK-AWISFSC 468 (698)
Q Consensus 394 ~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~E-Ti--~~~~Eakaa~~a~~~~-~~~P-v~iS~t~ 468 (698)
|.+. .+. +++.+.++.+.+.|+|.|.+- |+ ....++...+.++++. ++.+ +.+++-+
T Consensus 143 ----------d~~~----~~~----~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~ 204 (293)
T 3ewb_X 143 ----------DATR----SDR----AFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHC 204 (293)
T ss_dssp ----------TGGG----SCH----HHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEEC
T ss_pred ----------cCCC----CCH----HHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEe
Confidence 1111 233 567778888999999988654 43 4677888888888853 3332 5678888
Q ss_pred cCCCccCCCCcHHHHHHHHH
Q psy13907 469 KDEKHTCHGDKFGLIARDVY 488 (698)
Q Consensus 469 ~~~g~l~~G~~l~~~v~~~~ 488 (698)
.+ -.|..+..++.++.
T Consensus 205 Hn----d~Gla~AN~laA~~ 220 (293)
T 3ewb_X 205 HD----DLGMATANALAAIE 220 (293)
T ss_dssp BC----TTSCHHHHHHHHHH
T ss_pred CC----CcChHHHHHHHHHH
Confidence 77 56777777777764
No 143
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=62.38 E-value=35 Score=36.17 Aligned_cols=51 Identities=20% Similarity=0.265 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhCC--CCEEEEec-----CcCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy13907 80 IDYHRPRIEALIQGG--IDLLAIET-----LPAQEEAMVLAELIKEYPGLKAWIS-FSCK 131 (698)
Q Consensus 80 ~~~~~~qi~~l~~~G--VD~il~ET-----i~~l~Ea~aa~~a~~~~~~~Pv~iS-ft~~ 131 (698)
.+.+...++.|.+.| +|.|-+.. .|+..+++.+++.+.. .++||||| +-+.
T Consensus 201 ~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~-~Gl~i~iTElDi~ 259 (356)
T 2uwf_A 201 RDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTS-LGLDNQVTELDMS 259 (356)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHh-cCCcEEEEecccc
Confidence 355667888888888 59998864 3788999999988887 58999998 5454
No 144
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=61.89 E-value=1.1e+02 Score=30.52 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=59.6
Q ss_pred HHHHHHHHHhCCCCEEEEecCcC----------------------HHHHHHHHHHHHhc-CCCeEEEEEEEcCCCccCCC
Q psy13907 83 HRPRIEALIQGGIDLLAIETLPA----------------------QEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHG 139 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi~~----------------------l~Ea~aa~~a~~~~-~~~Pv~iSft~~~~g~l~~G 139 (698)
..+.++.|.++|+|+|-+-+-.+ +......++.+++. .++|+++ |+..+ .....|
T Consensus 33 ~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~l-m~y~n-~v~~~g 110 (268)
T 1qop_A 33 SLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGL-LMYAN-LVFNNG 110 (268)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEE-EECHH-HHHTTC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEE-EEccc-HHHHhh
Confidence 35678889899999999986222 22233566777765 6889765 33111 111122
Q ss_pred CCHHHHHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhc
Q psy13907 140 DKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEG 181 (698)
Q Consensus 140 ~~~~~~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~ 181 (698)
.+..++.+.. .|+++|-+....++.+...++.+++.+
T Consensus 111 --~~~~~~~~~~---aGadgii~~d~~~e~~~~~~~~~~~~g 147 (268)
T 1qop_A 111 --IDAFYARCEQ---VGVDSVLVADVPVEESAPFRQAALRHN 147 (268)
T ss_dssp --HHHHHHHHHH---HTCCEEEETTCCGGGCHHHHHHHHHTT
T ss_pred --HHHHHHHHHH---cCCCEEEEcCCCHHHHHHHHHHHHHcC
Confidence 3556665542 578988898888888888888887654
No 145
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=60.67 E-value=24 Score=35.93 Aligned_cols=62 Identities=21% Similarity=0.273 Sum_probs=44.4
Q ss_pred HHHHHHhCCCCEEEE--ecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEc
Q psy13907 86 RIEALIQGGIDLLAI--ETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 163 (698)
Q Consensus 86 qi~~l~~~GVD~il~--ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiN 163 (698)
|++.....|+|.+++ -+++ ..+++..++.+++ .++.+|++.+ +.+++...+. .+++.||+|
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~-~~~l~~l~~~a~~-lGl~~lvev~-----------t~ee~~~A~~----~Gad~IGv~ 189 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALE-QSVLVSMLDRTES-LGMTALVEVH-----------TEQEADRALK----AGAKVIGVN 189 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSC-HHHHHHHHHHHHH-TTCEEEEEES-----------SHHHHHHHHH----HTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecccCC-HHHHHHHHHHHHH-CCCcEEEEcC-----------CHHHHHHHHH----CCCCEEEEC
Confidence 566666799999998 4444 5678888888888 4889988762 3555544332 479999999
Q ss_pred C
Q psy13907 164 C 164 (698)
Q Consensus 164 C 164 (698)
=
T Consensus 190 ~ 190 (272)
T 3qja_A 190 A 190 (272)
T ss_dssp S
T ss_pred C
Confidence 3
No 146
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=60.26 E-value=1e+02 Score=32.14 Aligned_cols=182 Identities=15% Similarity=0.173 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHhhccCCccCCCCcEEE--EecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCE
Q psy13907 358 LIRDAVKYVKEAIALEEKRDPAIASRHVRVA--GSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDL 435 (698)
Q Consensus 358 ln~~av~lAr~A~~~~~~~~~~~~~~~~~VA--GsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDl 435 (698)
+...|++..|++.. ...|. -++-||...=+.|.-.. +.+.-|+-.+.+.+|+-...++|+|+
T Consensus 103 ~v~rair~iK~~~p------------~l~vitDvcLc~YT~HGHcGil~~----g~V~ND~Tl~~L~k~Als~A~AGADi 166 (328)
T 1w1z_A 103 ILQQAIRAIKKAVP------------ELCIMTDVALDPFTPFGHDGLVKD----GIILNDETVEVLQKMAVSHAEAGADF 166 (328)
T ss_dssp HHHHHHHHHHHHST------------TSEEEEEECSTTTSTTSCSSEESS----SCEEHHHHHHHHHHHHHHHHHHTCSE
T ss_pred hHHHHHHHHHHHCC------------CeEEEEeeecccCCCCCceeeccC----CcCccHHHHHHHHHHHHHHHHcCCCe
Confidence 66677776666532 23444 35677764444443222 24788999999999999999999999
Q ss_pred EEecccCCHHHHHHHHHHHHh--cCCCeEEEEEEecC-------------------CCcc--CCCCcHHHHHHHHHHhCC
Q psy13907 436 LAIETLPAQEEAMVLAELIKE--YPGLKAWISFSCKD-------------------EKHT--CHGDKFGLIARDVYAKNP 492 (698)
Q Consensus 436 ll~ETi~~~~Eakaa~~a~~~--~~~~Pv~iS~t~~~-------------------~g~l--~~G~~l~~~v~~~~~~~~ 492 (698)
+.-=-|-|- ...++..++.+ +.+.|+| |-+.+- +.++ ++-..-.+++..+.....
T Consensus 167 VAPSdMMDG-rV~aIR~aLd~~G~~~v~Im-sYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN~~EAlrE~~~Di~ 244 (328)
T 1w1z_A 167 VSPSDMMDG-RIGAIREALDETDHSDVGIL-SYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPANTEEAMKEVELDIV 244 (328)
T ss_dssp EEECSCCTT-HHHHHHHHHHHTTCTTSEEE-EEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTCSHHHHHHHHHHHH
T ss_pred Eeccccccc-HHHHHHHHHHhCCCCCceee-ehhHHHhhhccchHHHHhccCCCCCCccccCCCCCCHHHHHHHHHhhHH
Confidence 999888876 45777788875 3457766 665431 0111 111112244443322222
Q ss_pred CCceEEEEcCCChhhhHHHHHHhc--CCCCEEEecCCCCCc----CCCCcccccCCChhhHHHHHHHHHHcCCeEE
Q psy13907 493 AQLVAVGVNCLAPHYVESLLTSAG--RDVPLLCCPNSGETF----DPGQRIWMNKDSVPSVDTYVPRWLDTGVKYV 562 (698)
Q Consensus 493 ~~~~~iGlNC~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~----d~~~g~~~~~~~p~~~a~~~~~~~~~G~~ii 562 (698)
.+.+.|.|-=..| .+.+++.++ .+.|+.+|=-+|+-- -...| |. + ....+.+....+..+|+.+|
T Consensus 245 EGAD~vMVKPal~--YLDIir~vk~~~~~P~aaYqVSGEYAMikaAa~~G-wi-D-~~~~v~Esl~~~kRAGAd~I 315 (328)
T 1w1z_A 245 EGADIVMVKPGLA--YLDIVWRTKERFDVPVAIYHVSGEYAMVKAAAAKG-WI-D-EDRVMMESLLCMKRAGADII 315 (328)
T ss_dssp HTCSEEEEESCGG--GHHHHHHHHHHHCSCEEEEECHHHHHHHHHHHHTT-SS-C-HHHHHHHHHHHHHHHTCSEE
T ss_pred hCCCEEEEcCCCc--hHHHHHHHHHhcCCCEEEEEccHHHHHHHHHHHcC-Cc-c-HHHHHHHHHHHHHhcCCCEE
Confidence 4556677765444 344444444 589999999988511 11234 72 1 12346777777888998876
No 147
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=59.88 E-value=86 Score=31.42 Aligned_cols=92 Identities=15% Similarity=0.122 Sum_probs=56.8
Q ss_pred HHHHHHHHHhCCCCEEEEecCcC----------------------HHHHHHHHHHHHhcC-CCeEEEEEEEcCCCccCCC
Q psy13907 83 HRPRIEALIQGGIDLLAIETLPA----------------------QEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHG 139 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi~~----------------------l~Ea~aa~~a~~~~~-~~Pv~iSft~~~~g~l~~G 139 (698)
..+.++.|.++|||+|-+-+=.+ ++....+++.+++.. ++|+++ |+..+. ....|
T Consensus 33 ~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~-m~y~n~-v~~~g 110 (262)
T 2ekc_A 33 SLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL-MTYYNP-IFRIG 110 (262)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEE-ECCHHH-HHHHC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEE-EecCcH-HHHhh
Confidence 35568889999999999876322 122334466666544 889877 322110 01111
Q ss_pred CCHHHHHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhc
Q psy13907 140 DKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEG 181 (698)
Q Consensus 140 ~~~~~~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~ 181 (698)
++..++.+.. .|++++-+.+..++.+...++.+++.+
T Consensus 111 --~~~f~~~~~~---aG~dgvii~dl~~ee~~~~~~~~~~~g 147 (262)
T 2ekc_A 111 --LEKFCRLSRE---KGIDGFIVPDLPPEEAEELKAVMKKYV 147 (262)
T ss_dssp --HHHHHHHHHH---TTCCEEECTTCCHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHH---cCCCEEEECCCCHHHHHHHHHHHHHcC
Confidence 2455555432 578888888888888888887776654
No 148
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=59.84 E-value=17 Score=37.12 Aligned_cols=140 Identities=14% Similarity=0.069 Sum_probs=74.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHH
Q psy13907 410 DSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYA 489 (698)
Q Consensus 410 ~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~ 489 (698)
+.-+.+++.++-.+.++.|.+.|+|+|++=+... - ..++..+++..++|++ .+ +..++.....
T Consensus 45 G~ks~~~i~~~~~~~~~~L~~~g~~~IVIACNTa--~-~~al~~lr~~~~iPvi-gi-------------i~pa~~~A~~ 107 (269)
T 3ist_A 45 GPRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTA--T-AAALYDIREKLDIPVI-GV-------------IQPGSRAALK 107 (269)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHH--H-HHHHHHHHHHCSSCEE-ES-------------HHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCc--c-HHHHHHHHHhcCCCEE-ee-------------cHHHHHHHHH
Confidence 4578999999999999999999999998854221 1 2357788876689975 21 2223332211
Q ss_pred hCCCCceEEEEcCCChh----hhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCC-eEEee
Q psy13907 490 KNPAQLVAVGVNCLAPH----YVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGV-KYVGG 564 (698)
Q Consensus 490 ~~~~~~~~iGlNC~~p~----~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~-~iiGG 564 (698)
. ..-.-|||=.+... .....+++.+.+..+...|..+....-+.|.+........+.++++.+.+.|+ .+|=|
T Consensus 108 ~--~~~~~IGVLaT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lV~~vE~g~~~~~~~~~~l~~~l~~l~~~g~D~iVLG 185 (269)
T 3ist_A 108 A--TRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIAKKVVAESLLPLKSTKIDTVILG 185 (269)
T ss_dssp H--CSSSEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECHHHHHHHHTTCTTSHHHHHHHHHHHGGGGGSCCCEEEEC
T ss_pred H--cCCCeEEEEeccchhhHHHHHHHHHHhCCCCEEeccCCHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 1 11224566554322 33445555543444443343322111122312101122335556666666774 45666
Q ss_pred cCCC
Q psy13907 565 CCRT 568 (698)
Q Consensus 565 CCGT 568 (698)
|-.-
T Consensus 186 CTh~ 189 (269)
T 3ist_A 186 CTHY 189 (269)
T ss_dssp STTG
T ss_pred CCCH
Confidence 7543
No 149
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=59.77 E-value=1.1e+02 Score=31.08 Aligned_cols=63 Identities=8% Similarity=0.058 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhCCCCEEEE-ecCc--CHHHHHHHHHHHHhcC-CCeEEEEEEEcCCCccCCCCCHHHHHHHHH
Q psy13907 82 YHRPRIEALIQGGIDLLAI-ETLP--AQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVY 150 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~-ETi~--~l~Ea~aa~~a~~~~~-~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~ 150 (698)
++.+.++.+.+.|+|.|.+ -|+- ...++...++.+++.. ++| +++.+.++ .|.-+..++..+.
T Consensus 157 ~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~--i~~H~Hn~----~Gla~An~laA~~ 223 (298)
T 2cw6_A 157 KVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAA--LAVHCHDT----YGQALANTLMALQ 223 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGG--EEEEEBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEEECCC----CchHHHHHHHHHH
Confidence 5566677788899998844 4554 6788888899888742 344 67777776 4666677777664
No 150
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=59.74 E-value=45 Score=35.15 Aligned_cols=144 Identities=10% Similarity=-0.026 Sum_probs=82.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 484 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v 484 (698)
.++++ .++..++.+++.|||.|++ |. .-+..|-+.+++. ....+.||++... +.+..+++
T Consensus 43 ~ID~~----~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~grvpViaGvg---------~~st~eai 108 (344)
T 2hmc_A 43 TPDFD----ALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKAGIPVIVGTG---------AVNTASAV 108 (344)
T ss_dssp SBCHH----HHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHTTCCEEEECC---------CSSHHHHH
T ss_pred CcCHH----HHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCCCCcEEEecC---------CCCHHHHH
Confidence 46664 4566777788899999876 42 2456677777776 3224689886552 34566777
Q ss_pred HHHHHhCCCCceEEEEcC---CC---hhhhHHHHHHhc---CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 485 RDVYAKNPAQLVAVGVNC---LA---PHYVESLLTSAG---RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 485 ~~~~~~~~~~~~~iGlNC---~~---p~~~~~~l~~l~---~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
+........+++++.+-. .. .+.+..+.+.+. .+.|+++|-+- . .| .+.+++.+.+.+ .
T Consensus 109 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P-~-----tg---~~l~~e~~~~L~---a 176 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP-Y-----YG---FATRADLFFALR---A 176 (344)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG-G-----GT---BCCCHHHHHHHH---H
T ss_pred HHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC-c-----cC---CCcCHHHHHHHH---h
Confidence 665432234666776655 23 345666766654 47999999654 1 11 145666665542 2
Q ss_pred HcCCeEEeecCCCchHHHHHHHhccc
Q psy13907 556 DTGVKYVGGCCRTNADDMKNVNQVPV 581 (698)
Q Consensus 556 ~~G~~iiGGCCGTtP~hI~al~~~v~ 581 (698)
+. -||+|==-.+.|.++..+.+.++
T Consensus 177 ~~-pnIvGiKdssgp~d~~~~~~~~~ 201 (344)
T 2hmc_A 177 EH-KNLVGFKEFGGPADMRYAAENIT 201 (344)
T ss_dssp HC-TTEEEEEECSCHHHHHHHHHHTS
T ss_pred cC-CCEEEEEcCCCCCCHHHHHHHHH
Confidence 22 45666311122434444444443
No 151
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=59.53 E-value=61 Score=32.73 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=28.7
Q ss_pred HHHHHHHhCCCCEEEEec----CcCHHHHHHHHHHHHhcCCCeE
Q psy13907 85 PRIEALIQGGIDLLAIET----LPAQEEAMVLAELIKEYPGLKA 124 (698)
Q Consensus 85 ~qi~~l~~~GVD~il~ET----i~~l~Ea~aa~~a~~~~~~~Pv 124 (698)
++++.+++.|+|+|=+=. ++..+|++.++..+++..++|+
T Consensus 29 ~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~~~pi 72 (262)
T 1f6y_A 29 EWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTL 72 (262)
T ss_dssp HHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhCCCeE
Confidence 355666678999987753 5677889999999887446664
No 152
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=59.53 E-value=19 Score=38.41 Aligned_cols=138 Identities=17% Similarity=0.083 Sum_probs=83.4
Q ss_pred ChHHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecC
Q psy13907 313 NRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLG 392 (698)
Q Consensus 313 ~Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiG 392 (698)
+++-|+...+.-..+|.++|.+. ..+|.......++++.+++.+.....++.||+. +.. |..+
T Consensus 85 ~~~di~~a~~al~~ag~~~v~if-~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~------------g~~--v~~~-- 147 (370)
T 3rmj_A 85 IERDIRQAGEAVAPAPKKRIHTF-IATSPIHMEYKLKMKPKQVIEAAVKAVKIAREY------------TDD--VEFS-- 147 (370)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEE-EECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTT------------CSC--EEEE--
T ss_pred CHHHHHHHHHHHhhCCCCEEEEE-ecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHc------------CCE--EEEe--
Confidence 44445555444445788877543 234554444446787777776666666665542 112 2221
Q ss_pred CcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-cc--CCHHHHHHHHHHHHhc-CCC-eEEEEEE
Q psy13907 393 SYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE-TL--PAQEEAMVLAELIKEY-PGL-KAWISFS 467 (698)
Q Consensus 393 P~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~E-Ti--~~~~Eakaa~~a~~~~-~~~-Pv~iS~t 467 (698)
+ ||.+. .+. +++.+.++.+.+.|+|.|.+= |+ ....+....+.++++. +.. .+.+++-
T Consensus 148 ~---------ed~~r----~~~----~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H 210 (370)
T 3rmj_A 148 C---------EDALR----SEI----DFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAH 210 (370)
T ss_dssp E---------ETGGG----SCH----HHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEE
T ss_pred c---------CCCCc----cCH----HHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEE
Confidence 1 11121 233 567788888899999988553 43 4577888888888863 221 1567888
Q ss_pred ecCCCccCCCCcHHHHHHHHH
Q psy13907 468 CKDEKHTCHGDKFGLIARDVY 488 (698)
Q Consensus 468 ~~~~g~l~~G~~l~~~v~~~~ 488 (698)
+.+ -.|..+..++.++.
T Consensus 211 ~Hn----d~GlAvAN~laAv~ 227 (370)
T 3rmj_A 211 CHN----DLGLAVANSLAALK 227 (370)
T ss_dssp CBC----TTSCHHHHHHHHHH
T ss_pred eCC----CCChHHHHHHHHHH
Confidence 877 46777777777764
No 153
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=59.27 E-value=56 Score=34.23 Aligned_cols=130 Identities=12% Similarity=0.142 Sum_probs=80.2
Q ss_pred HHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCCcCCCCCCC
Q psy13907 322 RDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDG 401 (698)
Q Consensus 322 ~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP~~~~l~~~ 401 (698)
+.-+++|+|+|... +.+|.......++++.++..+.....++.||+. +. .|.+++-.+.
T Consensus 103 ~~a~~~g~~~v~i~-~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~------------G~--~v~~~~~~~~------ 161 (337)
T 3ble_A 103 DWIKDSGAKVLNLL-TKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKS------------GL--KINVYLEDWS------ 161 (337)
T ss_dssp HHHHHHTCCEEEEE-EECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHT------------TC--EEEEEEETHH------
T ss_pred HHHHHCCCCEEEEE-EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC------------CC--EEEEEEEECC------
Confidence 34568999998764 346665555556777666655555555555442 22 2333321100
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-cc--CCHHHHHHHHHHHHhcC-CCeEEEEEEecCCCccCCC
Q psy13907 402 SEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE-TL--PAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHG 477 (698)
Q Consensus 402 ~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~E-Ti--~~~~Eakaa~~a~~~~~-~~Pv~iS~t~~~~g~l~~G 477 (698)
|.+. .+ .+++.+.++.+.+.|+|.|.+- |+ -...++...+.++++.. +.| |++-+.+ -.|
T Consensus 162 --~~~~----~~----~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~--i~~H~Hn----d~G 225 (337)
T 3ble_A 162 --NGFR----NS----PDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIH--FEFHGHN----DYD 225 (337)
T ss_dssp --HHHH----HC----HHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSC--EEEECBC----TTS
T ss_pred --CCCc----CC----HHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCe--EEEEecC----Ccc
Confidence 0111 11 3667888889999999998553 43 46778888888888643 445 5777777 567
Q ss_pred CcHHHHHHHHH
Q psy13907 478 DKFGLIARDVY 488 (698)
Q Consensus 478 ~~l~~~v~~~~ 488 (698)
..+..++.++.
T Consensus 226 lA~AN~laAv~ 236 (337)
T 3ble_A 226 LSVANSLQAIR 236 (337)
T ss_dssp CHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 77777777764
No 154
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=59.22 E-value=6.1 Score=40.91 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=32.7
Q ss_pred HHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy13907 421 HRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 463 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~ 463 (698)
-.++++++.++|+|.|++|.+++..+++.+.+.+ +.|++
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~i 208 (287)
T 3b8i_A 170 VIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL----HIPLM 208 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC----CSCEE
T ss_pred HHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC----CCCEE
Confidence 4578899999999999999999999988776554 47876
No 155
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=59.14 E-value=1.5e+02 Score=30.76 Aligned_cols=43 Identities=16% Similarity=0.297 Sum_probs=35.8
Q ss_pred CCChhhHHHHHHHHHHcCCeEEeecCC----CchHHHHHHHhccccC
Q psy13907 541 KDSVPSVDTYVPRWLDTGVKYVGGCCR----TNADDMKNVNQVPVKF 583 (698)
Q Consensus 541 ~~~p~~~a~~~~~~~~~G~~iiGGCCG----TtP~hI~al~~~v~~~ 583 (698)
..+++++.+.+++.++.|--|++--|| |.|++++++.++++++
T Consensus 300 ~g~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 300 PGPVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHh
Confidence 357889999999999988888886677 5679999999998865
No 156
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=58.86 E-value=1.1e+02 Score=31.94 Aligned_cols=91 Identities=10% Similarity=0.055 Sum_probs=56.1
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEEecC----------cC---------------HHHHHHHHHHHHhcCCCeE
Q psy13907 73 STTPQEL---IDYHRPRIEALIQGGIDLLAIETL----------PA---------------QEEAMVLAELIKEYPGLKA 124 (698)
Q Consensus 73 ~~s~eel---~~~~~~qi~~l~~~GVD~il~ETi----------~~---------------l~Ea~aa~~a~~~~~~~Pv 124 (698)
.+|.+|+ .+.|.+-++.+.++|.|.|=+=-- |. ..-+..+++++++..+.|+
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv 212 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPL 212 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcE
Confidence 4666665 456666677778899999854321 11 2234566677766458899
Q ss_pred EEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcCC
Q psy13907 125 WISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCL 165 (698)
Q Consensus 125 ~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC~ 165 (698)
.+-++..+. ..+|.+.+++.+.+......+++.|-+-..
T Consensus 213 ~vris~~~~--~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~ 251 (338)
T 1z41_A 213 FVRVSASDY--TDKGLDIADHIGFAKWMKEQGVDLIDCSSG 251 (338)
T ss_dssp EEEEECCCC--STTSCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEecCccc--CCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 988876543 335777776655443223467888777554
No 157
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=57.87 E-value=1.2e+02 Score=30.39 Aligned_cols=147 Identities=10% Similarity=0.184 Sum_probs=80.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EecccCCHHHHHHHHHHHHhc-CCCeEEEEEEecC-CCccCCCCcH-HHHH
Q psy13907 413 TPQELIDYHRPRIEALIQGGIDLL-----AIETLPAQEEAMVLAELIKEY-PGLKAWISFSCKD-EKHTCHGDKF-GLIA 484 (698)
Q Consensus 413 t~del~~~y~~qi~~L~~~GvDll-----l~ETi~~~~Eakaa~~a~~~~-~~~Pv~iS~t~~~-~g~l~~G~~l-~~~v 484 (698)
|.+++. .+++.+...|+|++ +++.+++..+++..+..+++. .++|+++++-... +|+......- .+..
T Consensus 30 t~~e~l----~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll 105 (258)
T 4h3d_A 30 NKKDII----KEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLN 105 (258)
T ss_dssp SHHHHH----HHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHH
T ss_pred CHHHHH----HHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHH
Confidence 455553 45556677899997 778888999999999988864 4799987775433 4443322211 1223
Q ss_pred HHHHHhCCCCceEEEEcC-CChhhhHHHHHHhc-CCCCEEE-ecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeE
Q psy13907 485 RDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAG-RDVPLLC-CPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKY 561 (698)
Q Consensus 485 ~~~~~~~~~~~~~iGlNC-~~p~~~~~~l~~l~-~~~pl~~-yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~i 561 (698)
..+.. ...++.|=+-= ...+.+..+++..+ ....+++ |=|- .+ ..+.+++.+...+..+.|+.|
T Consensus 106 ~~~~~--~~~~d~iDvEl~~~~~~~~~l~~~a~~~~~kiI~S~Hdf-------~~----TP~~~el~~~~~~~~~~gaDI 172 (258)
T 4h3d_A 106 KEISN--TGLVDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNHDF-------NK----TPKKEEIVSRLCRMQELGADL 172 (258)
T ss_dssp HHHHH--TTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEES-------SC----CCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHh--cCCchhhHHhhhccHHHHHHHHHHHHhCCCEEEEEEecC-------CC----CCCHHHHHHHHHHHHHhCCCE
Confidence 33322 12345555655 34444555555444 3444433 1110 11 112356777778888888655
Q ss_pred EeecC-CCchHHHHHH
Q psy13907 562 VGGCC-RTNADDMKNV 576 (698)
Q Consensus 562 iGGCC-GTtP~hI~al 576 (698)
+==++ -.++++.-.|
T Consensus 173 vKia~~~~~~~D~l~L 188 (258)
T 4h3d_A 173 PKIAVMPQNEKDVLVL 188 (258)
T ss_dssp EEEEECCSSHHHHHHH
T ss_pred EEEEEccCCHHHHHHH
Confidence 32222 2355554444
No 158
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=57.52 E-value=8.9 Score=39.38 Aligned_cols=41 Identities=15% Similarity=0.093 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 81 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
+.-.++++++.++|+|.|++|.+++.+|++.+.+.+ ++|+-
T Consensus 168 ~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~n 208 (275)
T 2ze3_A 168 AETVRRGQAYADAGADGIFVPLALQSQDIRALADAL----RVPLN 208 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHC----SSCEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhc----CCCEE
Confidence 344558999999999999999999999999887664 46863
No 159
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=57.33 E-value=46 Score=34.71 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=31.3
Q ss_pred CccEEeecCCCCceeecCeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCce----EEEecccc
Q psy13907 223 EAPLKAKPNRSLFETYHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKL----YLIDGGFS 285 (698)
Q Consensus 223 ~~~~~~~pnag~p~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~----~i~dG~~g 285 (698)
+.|+.++++.|.|+...... .|+ -.++.. ++|.+-. +.+.+.++ +|+|=|+|
T Consensus 148 g~~vVlMh~~G~P~tmq~~~---~yd-vv~ev~---~~l~~~i----~~a~~~GI~~~~IilDPG~G 203 (314)
T 3tr9_A 148 KTPVCLMHFPSETRKPGSTT---HFY-FLQSVK---KELQESI----QRCKKAGISEDRIIIDPGFG 203 (314)
T ss_dssp TCCEEEECCCCTTCCTTSSC---HHH-HHHHHH---HHHHHHH----HHHHHTTCCGGGEEEECCCC
T ss_pred CCeEEEECCCCCCccccccc---ccc-hHHHHH---HHHHHHH----HHHHHcCCCHhHEEEeCCCC
Confidence 68899999999998765433 252 222222 2444433 23344554 88998877
No 160
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=57.05 E-value=45 Score=34.03 Aligned_cols=43 Identities=16% Similarity=0.087 Sum_probs=28.6
Q ss_pred ChhhhHHHHHHhHhhc-ccccccccccccCCChHHHHHHHHHHHHc
Q psy13907 166 APHYVESLLTSAEVEG-QSLELPVNNTLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 166 ~p~~i~~~l~~~~~~~-~~~~~p~~~~~~~~gP~~~~~~~~~l~~~ 210 (698)
.|+.+...++.+...+ ..+.+++..|. --|.++.++++++.+.
T Consensus 153 ~~~~~~~~~~~~~~~G~d~i~l~Dt~G~--~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 153 TPQAVASVTEQLFSLGCHEVSLGDTIGR--GTPDTVAAMLDAVLAI 196 (295)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEETTSC--CCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcCCCEEEecCCCCC--cCHHHHHHHHHHHHHh
Confidence 5666666666555554 22455655555 3699999999999875
No 161
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=57.02 E-value=28 Score=35.99 Aligned_cols=108 Identities=13% Similarity=0.066 Sum_probs=61.8
Q ss_pred hCCCCEEEEecCcCHHHHH---HHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcCCChh
Q psy13907 92 QGGIDLLAIETLPAQEEAM---VLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPH 168 (698)
Q Consensus 92 ~~GVD~il~ETi~~l~Ea~---aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC~~p~ 168 (698)
+.|+++++-|.+..-.... ...+.+....+.|+++++. |...++.++.+...... +|+|-|||..|.
T Consensus 26 ~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~---------g~~~~~~~~aa~~a~~~-~d~Iein~gcP~ 95 (318)
T 1vhn_A 26 EWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF---------GSEPNELSEAARILSEK-YKWIDLNAGCPV 95 (318)
T ss_dssp TTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE---------CSCHHHHHHHHHHHTTT-CSEEEEEECCCC
T ss_pred HHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC---------CCCHHHHHHHHHHHHHh-CCEEEEECCCCc
Confidence 4689999999765322111 1112221125789999996 22344444433222345 999999998764
Q ss_pred hhHHHHHHhHhhcccccccccc-cccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCccEEeecCCCC
Q psy13907 169 YVESLLTSAEVEGQSLELPVNN-TLISRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSL 234 (698)
Q Consensus 169 ~i~~~l~~~~~~~~~~~~p~~~-~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~pnag~ 234 (698)
.-. .++ .+ +.+..-|..+.++++.+.+. . +.||+++=+.|+
T Consensus 96 ~~~-----r~~---------~~G~~l~~~~~~~~eiv~~v~~~------~-----~~pv~vKir~G~ 137 (318)
T 1vhn_A 96 RKV-----VKE---------GAGGALLKDLRHFRYIVRELRKS------V-----SGKFSVKTRLGW 137 (318)
T ss_dssp HHH-----HHT---------TCGGGGGSCHHHHHHHHHHHHHH------C-----SSEEEEEEESCS
T ss_pred Hhc-----CCC---------CcccchhhCHHHHHHHHHHHHHh------h-----CCCEEEEecCCC
Confidence 311 011 11 22334688888999988876 3 467777655554
No 162
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=56.67 E-value=1.2e+02 Score=31.16 Aligned_cols=84 Identities=19% Similarity=0.194 Sum_probs=48.0
Q ss_pred CCCHHHHHHHHHHHHHH-----------------HHhCCCCEEEecc-----------------cCCHHHHH--HHHHHH
Q psy13907 411 STTPQELIDYHRPRIEA-----------------LIQGGIDLLAIET-----------------LPAQEEAM--VLAELI 454 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~-----------------L~~~GvDlll~ET-----------------i~~~~Eak--aa~~a~ 454 (698)
..+.+|+.+..+.|++. ...+|+|+|++=. +.|..+.- .+-+.+
T Consensus 10 ~~~r~~il~~l~~~i~~~~~iig~gaGtGlsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evl 89 (286)
T 2p10_A 10 RPTRSELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVL 89 (286)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHG
T ss_pred ccCHHHHHHHHHHHHhcCCceEEEecccchhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhh
Confidence 36789999999887653 5678999998621 11221110 111222
Q ss_pred HhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcCC
Q psy13907 455 KEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCL 503 (698)
Q Consensus 455 ~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~ 503 (698)
-...+.|||..+.-.| -|......++.+++ .+..++ +|-.
T Consensus 90 p~v~~iPV~Agv~~~D-----P~~~~g~~Le~lk~---~Gf~Gv-~N~p 129 (286)
T 2p10_A 90 PVVRHTPVLAGVNGTD-----PFMVMSTFLRELKE---IGFAGV-QNFP 129 (286)
T ss_dssp GGCSSSCEEEEECTTC-----TTCCHHHHHHHHHH---HTCCEE-EECS
T ss_pred ccCCCCCEEEEECCcC-----CCcCHHHHHHHHHH---hCCceE-EECC
Confidence 2234689887742222 34455566666655 455667 7774
No 163
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=56.26 E-value=34 Score=33.79 Aligned_cols=50 Identities=10% Similarity=0.094 Sum_probs=37.7
Q ss_pred HHHHHHHHHhCCCCEEEe-----cccCCHHHHHHHHHHHHhc--CCCeEEEEEEecC
Q psy13907 421 HRPRIEALIQGGIDLLAI-----ETLPAQEEAMVLAELIKEY--PGLKAWISFSCKD 470 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~-----ETi~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~ 470 (698)
..+.++.+.++|+|.+-+ -.+|++..-..+++.+++. +++|+-+-+.+.+
T Consensus 19 l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~ 75 (228)
T 3ovp_A 19 LGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSK 75 (228)
T ss_dssp HHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSC
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCC
Confidence 346778888999999988 5567776666788888875 5788877777654
No 164
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=55.36 E-value=57 Score=32.74 Aligned_cols=50 Identities=12% Similarity=0.213 Sum_probs=38.8
Q ss_pred HHHHHHHHHhCCCCEEEe-----cccCCHHHHHHHHHHHHhcC-CCeEEEEEEecC
Q psy13907 421 HRPRIEALIQGGIDLLAI-----ETLPAQEEAMVLAELIKEYP-GLKAWISFSCKD 470 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~-----ETi~~~~Eakaa~~a~~~~~-~~Pv~iS~t~~~ 470 (698)
..+.++.+.++|+|.+-+ -.+|++..-..+++++|+.+ ++|+-+-+.+.+
T Consensus 42 L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~ 97 (246)
T 3inp_A 42 LGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKP 97 (246)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSS
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCC
Confidence 356788888899998877 35577777778888888766 889888887765
No 165
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=55.10 E-value=1e+02 Score=32.35 Aligned_cols=160 Identities=16% Similarity=0.095 Sum_probs=78.2
Q ss_pred cChHHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEec
Q psy13907 312 SNRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSL 391 (698)
Q Consensus 312 ~~Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsi 391 (698)
.+|+...+.-+.-.++|+|.|..|-=.-......+.+|-+...-.++...-++-.++++ +.++.|--.+
T Consensus 67 ~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-----------~~PV~vKiR~ 135 (350)
T 3b0p_A 67 SDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-----------RVPVTVKMRL 135 (350)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-----------SSCEEEEEES
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-----------CCceEEEEec
Confidence 46887777777778899999998842111111111112111001122222222222222 2355554455
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCC-----HHH-------HHHHHHHHHhcC-
Q psy13907 392 GSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPA-----QEE-------AMVLAELIKEYP- 458 (698)
Q Consensus 392 GP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~-----~~E-------akaa~~a~~~~~- 458 (698)
|.. ...+.++ ..+.++.+.+.|+|.|.+-.-.. ..+ -...+..+++..
T Consensus 136 g~~---------------~~~~~~~----~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~ 196 (350)
T 3b0p_A 136 GLE---------------GKETYRG----LAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP 196 (350)
T ss_dssp CBT---------------TCCCHHH----HHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCT
T ss_pred CcC---------------ccccHHH----HHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC
Confidence 532 1123333 34557778899999998864210 000 012233444433
Q ss_pred CCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC---CChhhhHHHHHHh
Q psy13907 459 GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC---LAPHYVESLLTSA 515 (698)
Q Consensus 459 ~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC---~~p~~~~~~l~~l 515 (698)
++||++++-+. +..++.+.+ + +.++|++-= ..|..+..+.+.+
T Consensus 197 ~iPVianGgI~---------s~eda~~~l-~----GaD~V~iGRa~l~~P~l~~~i~~~l 242 (350)
T 3b0p_A 197 QLTFVTNGGIR---------SLEEALFHL-K----RVDGVMLGRAVYEDPFVLEEADRRV 242 (350)
T ss_dssp TSEEEEESSCC---------SHHHHHHHH-T----TSSEEEECHHHHHCGGGGTTHHHHT
T ss_pred CCeEEEECCcC---------CHHHHHHHH-h----CCCEEEECHHHHhCcHHHHHHHHHh
Confidence 78988766442 355666655 1 345555543 3565555554443
No 166
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=54.85 E-value=92 Score=32.61 Aligned_cols=91 Identities=9% Similarity=0.073 Sum_probs=56.1
Q ss_pred CCCHHH---HHHHHHHHHHHHHhCCCCEEEEecC----------c-----------CH----HHHHHHHHHHHhcC--CC
Q psy13907 73 STTPQE---LIDYHRPRIEALIQGGIDLLAIETL----------P-----------AQ----EEAMVLAELIKEYP--GL 122 (698)
Q Consensus 73 ~~s~ee---l~~~~~~qi~~l~~~GVD~il~ETi----------~-----------~l----~Ea~aa~~a~~~~~--~~ 122 (698)
.+|.+| +.+.|.+-++...++|.|.|=+=-- | ++ .-+..+++++++.. +.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 466555 5566666677778899998744321 1 11 12455667776643 68
Q ss_pred eEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcCC
Q psy13907 123 KAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCL 165 (698)
Q Consensus 123 Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC~ 165 (698)
|+.+-++..+. ...|.++++++..+......+++.|-+-+.
T Consensus 221 pV~vRls~~~~--~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g 261 (349)
T 3hgj_A 221 PLFVRVSATDW--GEGGWSLEDTLAFARRLKELGVDLLDCSSG 261 (349)
T ss_dssp CEEEEEESCCC--STTSCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEeccccc--cCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 99998886543 335777777665443323467888887663
No 167
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=54.41 E-value=8.3 Score=39.88 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=32.4
Q ss_pred HHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 83 HRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
-.++++++.++|+|.|++|.+++.+|++.+.+.+ ++|++
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~i 208 (287)
T 3b8i_A 170 VIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL----HIPLM 208 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC----CSCEE
T ss_pred HHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC----CCCEE
Confidence 4458899999999999999999999988776543 47887
No 168
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=53.60 E-value=41 Score=33.15 Aligned_cols=50 Identities=12% Similarity=0.211 Sum_probs=35.1
Q ss_pred HHHHHHHHHhCCCCEEEecc-----cCCHHHHHHHHHHHHhcCCCeEEEEEEecC
Q psy13907 421 HRPRIEALIQGGIDLLAIET-----LPAQEEAMVLAELIKEYPGLKAWISFSCKD 470 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ET-----i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~ 470 (698)
..++++.+.++|+|++-+-- ++++......++.+++.+++|+-+-+-+.|
T Consensus 19 l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~d 73 (230)
T 1tqj_A 19 LGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVE 73 (230)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSS
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccC
Confidence 45678889999999874432 244444446777888777789888887755
No 169
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=53.30 E-value=2.2e+02 Score=29.77 Aligned_cols=224 Identities=11% Similarity=0.069 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEE--EecC
Q psy13907 315 QAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVA--GSLG 392 (698)
Q Consensus 315 e~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VA--GsiG 392 (698)
|.+.+.-++-++.|-.-|.. |...+..+++..|-....-..+...|++..|++.. ..+|. -++-
T Consensus 66 d~l~~~~~~~~~lGi~~v~L--Fgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~p------------dl~vitDvcLc 131 (337)
T 1w5q_A 66 DQLLIEAEEWVALGIPALAL--FPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFP------------ELGIITDVCLC 131 (337)
T ss_dssp HHHHHHHHHHHHTTCCEEEE--EECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCT------------TSEEEEEECST
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecCCCcccCCcccCccCCCCChHHHHHHHHHHHCC------------CeEEEEeeecc
Confidence 44445566777888664433 33323333332222111112377777777776542 23444 3567
Q ss_pred CcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHh--cCCCeEEEEEEecC
Q psy13907 393 SYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE--YPGLKAWISFSCKD 470 (698)
Q Consensus 393 P~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~--~~~~Pv~iS~t~~~ 470 (698)
||...=+.|.-.. .+.+.-|+-.+.+.+|+-...++|+|++.-=-|-|- ...++..++.+ +.+.|+| |-+.+-
T Consensus 132 ~YT~HGHcGil~~---~g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~v~Im-sYsaKy 206 (337)
T 1w5q_A 132 EFTTHGQCGILDD---DGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDG-RIGAIREALESAGHTNVRVM-AYSAKY 206 (337)
T ss_dssp TTBTTCCSSCBCT---TSCBCHHHHHHHHHHHHHHHHHTTCSEEEECSCCTT-HHHHHHHHHHHTTCTTCEEE-EEEEEB
T ss_pred cCCCCCcceeeCC---CCcCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHHCCCCCceee-hhHHHH
Confidence 7764444443221 134889999999999999999999999999888876 45777778875 3456766 655431
Q ss_pred --------------C-----C--c--cCCCCcHHHHHHHHHHhCCCCceEEEEcCCChhhhHHHHHHhc--CCCCEEEec
Q psy13907 471 --------------E-----K--H--TCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAG--RDVPLLCCP 525 (698)
Q Consensus 471 --------------~-----g--~--l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~--~~~pl~~yP 525 (698)
. | + -++-..-.+++..+......+.+.|.|-=..| .+.+++.++ .+.|+.+|=
T Consensus 207 ASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKPal~--YLDIir~vk~~~~~PvaaYq 284 (337)
T 1w5q_A 207 ASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEVAADLAEGADMVMVKPGMP--YLDIVRRVKDEFRAPTFVYQ 284 (337)
T ss_dssp CCGGGHHHHHC----------CGGGTSBCTTCSHHHHHHHHHHHHTTCSEEEEESCGG--GHHHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHHHHhcCCcccCCCCccccCCCCCChHHHHHHHHhhHHhCCCEEEEcCCCc--hHHHHHHHHHhcCCCEEEEE
Confidence 0 1 1 01111122444433222234566777766444 344444444 589999999
Q ss_pred CCCCCc----CCCCcccccCCChhhHHHHHHHHHHcCCeEEe
Q psy13907 526 NSGETF----DPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVG 563 (698)
Q Consensus 526 NaG~~~----d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiG 563 (698)
-+|+-- -...| |. + ...+.+.+..+..+|+.+|=
T Consensus 285 VSGEYAMikaAa~~G-wi-D--~~~v~Esl~~~kRAGAd~Ii 322 (337)
T 1w5q_A 285 VSGEYAMHMGAIQNG-WL-A--ESVILESLTAFKRAGADGIL 322 (337)
T ss_dssp CHHHHHHHHHHHHTT-SS-C--TTHHHHHHHHHHHHTCSEEE
T ss_pred cCcHHHHHHHHHHcC-Cc-c--HHHHHHHHHHHHhcCCCEEe
Confidence 998521 11234 73 2 44577777888888988763
No 170
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=53.27 E-value=63 Score=34.84 Aligned_cols=66 Identities=11% Similarity=0.101 Sum_probs=44.2
Q ss_pred HHHHHHHHhCCCCEEEEecCc-CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEE
Q psy13907 84 RPRIEALIQGGIDLLAIETLP-AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGV 162 (698)
Q Consensus 84 ~~qi~~l~~~GVD~il~ETi~-~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGi 162 (698)
.++++.++++|||+|.+.|-. +...+...++.+++..+.|+++.-. .+.+++...+. .++|+|.+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V----------~t~e~A~~a~~----aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV----------VTEEATKELIE----NGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEE----------CSHHHHHHHHH----TTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeec----------CCHHHHHHHHH----cCCCEEEE
Confidence 568999999999999987543 3444556667777634789887311 24555544332 68888888
Q ss_pred c
Q psy13907 163 N 163 (698)
Q Consensus 163 N 163 (698)
.
T Consensus 212 G 212 (400)
T 3ffs_A 212 G 212 (400)
T ss_dssp C
T ss_pred e
Confidence 4
No 171
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=53.19 E-value=1.5e+02 Score=30.37 Aligned_cols=77 Identities=14% Similarity=0.052 Sum_probs=45.0
Q ss_pred HHHHHhCCCCEEEEecC--cCH------HHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCH-HHHHHHHHhhCCCCc
Q psy13907 87 IEALIQGGIDLLAIETL--PAQ------EEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKF-GLIARDVYAKNPAQL 157 (698)
Q Consensus 87 i~~l~~~GVD~il~ETi--~~l------~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~-~~~~~~l~~~~~~~~ 157 (698)
++..++.|+|.+-+=.. ++. .+++.+.+.+++ .++|+++-+-.... ...+..+. ..+...+......++
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~-~G~p~lv~~~~~g~-~v~~~~~~~~~v~~aa~~a~~lGa 191 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHS-NGLLSIIEPVVRPP-RCGDKFDREQAIIDAAKELGDSGA 191 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHT-TTCEEEEEEEECCC-SSCSCCCHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHH-cCCcEEEEEECCCC-ccccCCChhHHHHHHHHHHHHcCC
Confidence 44455689999873332 332 667777777777 58999887644322 23222233 323332332245789
Q ss_pred eEEEEcCC
Q psy13907 158 VAVGVNCL 165 (698)
Q Consensus 158 ~aIGiNC~ 165 (698)
|.|++.-.
T Consensus 192 D~iKv~~~ 199 (304)
T 1to3_A 192 DLYKVEMP 199 (304)
T ss_dssp SEEEECCG
T ss_pred CEEEeCCC
Confidence 99988874
No 172
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=52.87 E-value=12 Score=39.02 Aligned_cols=44 Identities=18% Similarity=0.246 Sum_probs=36.6
Q ss_pred HHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEE
Q psy13907 83 HRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFS 129 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft 129 (698)
-.+|++++.++|+|.|.+|-+.+.+|++.+.+.++ +.|+++.++
T Consensus 172 Ai~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~---~~Pl~~n~~ 215 (302)
T 3fa4_A 172 SVARLRAARDAGADVGFLEGITSREMARQVIQDLA---GWPLLLNMV 215 (302)
T ss_dssp HHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT---TSCEEEECC
T ss_pred HHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc---CCceeEEEe
Confidence 34689999999999999999999999988877653 478887764
No 173
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=52.59 E-value=1.3e+02 Score=31.50 Aligned_cols=135 Identities=15% Similarity=0.137 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecC-c-----------------CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccC-
Q psy13907 77 QELIDYHRPRIEALIQGGIDLLAIETL-P-----------------AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTC- 137 (698)
Q Consensus 77 eel~~~~~~qi~~l~~~GVD~il~ETi-~-----------------~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~- 137 (698)
+.+.++|.++++ +|+=+|+.|-. . .+...+.+.+++++ .+.++++++.= .|+..
T Consensus 37 ~~~~~yy~~rA~----gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~~~vh~-~G~~i~~QL~H--~Gr~~~ 109 (343)
T 3kru_A 37 DWHIVHYATRAI----GGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKA-NGAVMGIQLAH--AGRKCN 109 (343)
T ss_dssp HHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHHHHHH-TTCEEEEEEEC--CGGGCC
T ss_pred ceeeeeeehhhc----cceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHHHHHhc-CCceEeeehhh--ccCccC
Confidence 678889988776 78889998842 1 13346667777777 47788888752 12110
Q ss_pred --------------CC-------C---CHHHHHHH----HHhhCCCCceEEEEcCCChhhhHHHHHHhHhhccccccccc
Q psy13907 138 --------------HG-------D---KFGLIARD----VYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVN 189 (698)
Q Consensus 138 --------------~G-------~---~~~~~~~~----l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~ 189 (698)
.+ - .+.++++. .......|.|+|=|||.+=-.+.+.+.-..+.-. ++
T Consensus 110 ~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~-----D~ 184 (343)
T 3kru_A 110 ISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRK-----DE 184 (343)
T ss_dssp CTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCC-----ST
T ss_pred cchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccc-----hh
Confidence 00 1 12233321 1111236899999999885555555544432211 12
Q ss_pred cc-ccCCChHHHHHHHHHHHHcCCCCCCCcCCCcCccEEeecCC
Q psy13907 190 NT-LISRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNR 232 (698)
Q Consensus 190 ~~-~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~pna 232 (698)
+| .+..-++-++++++.+++. .|. +.||.++=+.
T Consensus 185 yGGslenR~rf~~eiv~aVr~a----vg~-----d~pv~vRls~ 219 (343)
T 3kru_A 185 YGNSIENRARFLIEVIDEVRKN----WPE-----NKPIFVRVSA 219 (343)
T ss_dssp TSSSHHHHTHHHHHHHHHHHHT----SCT-----TSCEEEEEEC
T ss_pred hccchHhHHHHHHHHHHHHHhc----CCc-----cCCeEEEeec
Confidence 22 2222356678888888776 223 5567665443
No 174
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=52.42 E-value=77 Score=34.62 Aligned_cols=163 Identities=17% Similarity=0.146 Sum_probs=76.0
Q ss_pred CCcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---c------cCCHHHHHHH---
Q psy13907 383 RHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE---T------LPAQEEAMVL--- 450 (698)
Q Consensus 383 ~~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~E---T------i~~~~Eakaa--- 450 (698)
++.+|-|-+-=|..|++||. .+.+++ .++++.+++.|+|+|=+- | ++.-+|.+-+
T Consensus 189 ~~~~vMGIlNvTPDSFsDgg---------~~~~~a----l~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pv 255 (442)
T 3mcm_A 189 ANTIRMGIVNLSNQSFSDGN---------FDDNQR----KLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEF 255 (442)
T ss_dssp CSSEEEEEEECSSCC-CCCS---------SCCCHH----HHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCCCCC---------CCHHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH
Confidence 45789999888888888763 234443 466777888999998654 2 2234566554
Q ss_pred HHHHHh-cCCC--eEEEEEEecCCCccCCCCcHHHHHHHHHH-hCCCCceEEEEcC---CChhhhHHHHHHhcCCCCEEE
Q psy13907 451 AELIKE-YPGL--KAWISFSCKDEKHTCHGDKFGLIARDVYA-KNPAQLVAVGVNC---LAPHYVESLLTSAGRDVPLLC 523 (698)
Q Consensus 451 ~~a~~~-~~~~--Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~-~~~~~~~~iGlNC---~~p~~~~~~l~~l~~~~pl~~ 523 (698)
++++++ .... .+.||+--. .- +++++..+ ..+.. +.+|= ..-..|.+++++. +.|+++
T Consensus 256 I~~l~~~~~~~~~~vpISIDT~------~~----~VaeaAL~~~aGa~---i~INDVsg~~d~~m~~v~a~~--g~~vVl 320 (442)
T 3mcm_A 256 LEYFKSQLANLIYKPLVSIDTR------KL----EVMQKILAKHHDII---WMINDVECNNIEQKAQLIAKY--NKKYVI 320 (442)
T ss_dssp HHHHHHHTTTCSSCCEEEEECC------CH----HHHHHHHHHHGGGC---CEEEECCCTTHHHHHHHHHHH--TCEEEE
T ss_pred HHHHHhhccccCCCCeEEEeCC------CH----HHHHHHHhhCCCCC---EEEEcCCCCCChHHHHHHHHh--CCeEEE
Confidence 555554 1111 344566321 11 23333322 01222 22343 2223455555554 689999
Q ss_pred ecCCCCCcCCCCcccc--cCCChhhHHHHHHHHHHcCC---eEE---eecCCCchHHH
Q psy13907 524 CPNSGETFDPGQRIWM--NKDSVPSVDTYVPRWLDTGV---KYV---GGCCRTNADDM 573 (698)
Q Consensus 524 yPNaG~~~d~~~g~~~--~~~~p~~~a~~~~~~~~~G~---~ii---GGCCGTtP~hI 573 (698)
..+.|.|.+.....|. ..+--..+.+.++...++|+ +|+ |=--|.|.+|=
T Consensus 321 Mh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGF~Kt~~~n 378 (442)
T 3mcm_A 321 IHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYFDIGFGFGKKSDTA 378 (442)
T ss_dssp ECC----------------CTHHHHHHHHHHHHHHHTCCGGGEEEECCCC--------
T ss_pred ECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCCCCCHHHH
Confidence 9999976532211120 01112334555666778897 455 32234555543
No 175
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=51.87 E-value=60 Score=34.99 Aligned_cols=81 Identities=16% Similarity=0.236 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHh----cCCCeEEEEEEec--------------------CCCcc
Q psy13907 419 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE----YPGLKAWISFSCK--------------------DEKHT 474 (698)
Q Consensus 419 ~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~----~~~~Pv~iS~t~~--------------------~~g~l 474 (698)
+.--+|+..|.++|+|++=+ |+++..++++.-.--++ ....|++.-+-++ +.|.+
T Consensus 38 ~aTv~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNi 116 (406)
T 4g9p_A 38 EATTAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTL 116 (406)
T ss_dssp HHHHHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSS
T ss_pred HHHHHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCcccc
Confidence 34568999999999999988 79999888776544433 2568988777663 12223
Q ss_pred CCCC----cHHHHHHHHHHhCCCCceEEEEcC
Q psy13907 475 CHGD----KFGLIARDVYAKNPAQLVAVGVNC 502 (698)
Q Consensus 475 ~~G~----~l~~~v~~~~~~~~~~~~~iGlNC 502 (698)
-+|. -+.+.++...+ ..-+.=||+|.
T Consensus 117 g~~~k~~e~~~~vv~~ak~--~~~pIRIGVN~ 146 (406)
T 4g9p_A 117 GRGRHKDEHFAEMIRIAMD--LGKPVRIGANW 146 (406)
T ss_dssp CSTHHHHHHHHHHHHHHHH--HTCCEEEEEEG
T ss_pred CccccHHHHHHHHHHHHHH--ccCCceecccc
Confidence 2332 24456665543 24567899999
No 176
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=51.86 E-value=79 Score=32.64 Aligned_cols=64 Identities=17% Similarity=0.208 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhCCCCEEEEe-cC--cCHHHHHHHHHHHHhcCCCe-EEEEEEEcCCCccCCCCCHHHHHHHHH
Q psy13907 81 DYHRPRIEALIQGGIDLLAIE-TL--PAQEEAMVLAELIKEYPGLK-AWISFSCKDEKHTCHGDKFGLIARDVY 150 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~E-Ti--~~l~Ea~aa~~a~~~~~~~P-v~iSft~~~~g~l~~G~~~~~~~~~l~ 150 (698)
+++.+.++.+.+.|+|.|.+= |+ ....++...++.+++. .| +-++|-+.++ .|.-+..++..+.
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~--~~~~~l~~H~Hnd----~Gla~AN~laAv~ 224 (307)
T 1ydo_A 157 EQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLAR--FPANQIALHFHDT----RGTALANMVTALQ 224 (307)
T ss_dssp HHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTT--SCGGGEEEECBGG----GSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHh--CCCCeEEEEECCC----CchHHHHHHHHHH
Confidence 355666677778899987654 43 3678889999999873 32 4467777766 4777777777775
No 177
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=51.20 E-value=1e+02 Score=31.33 Aligned_cols=78 Identities=10% Similarity=0.078 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhCC-CCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEE
Q psy13907 82 YHRPRIEALIQGG-IDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 160 (698)
Q Consensus 82 ~~~~qi~~l~~~G-VD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aI 160 (698)
.|.+.++..++.| +|++=+|-...-+-++.+++.+++ .+.++++|..-. ..+.+-..+.+.+..+. ..++|.+
T Consensus 120 ~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~-~~~kvI~S~Hdf--~~tP~~~el~~~~~~~~---~~GaDIv 193 (276)
T 3o1n_A 120 QYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQ-HNVAVIMSNHDF--HKTPAAEEIVQRLRKMQ---ELGADIP 193 (276)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHH-TTCEEEEEEEES--SCCCCHHHHHHHHHHHH---HTTCSEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHh-CCCEEEEEeecC--CCCcCHHHHHHHHHHHH---HcCCCEE
Confidence 4555566666677 999999987766667777777776 578999998632 22333222333333332 3577776
Q ss_pred EEcCC
Q psy13907 161 GVNCL 165 (698)
Q Consensus 161 GiNC~ 165 (698)
=+-+.
T Consensus 194 Kia~~ 198 (276)
T 3o1n_A 194 KIAVM 198 (276)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 66554
No 178
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=51.11 E-value=60 Score=31.43 Aligned_cols=83 Identities=16% Similarity=0.135 Sum_probs=48.2
Q ss_pred HHHHHHHHHhCCCCEEEecccC----CHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCce
Q psy13907 421 HRPRIEALIQGGIDLLAIETLP----AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLV 496 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi~----~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~ 496 (698)
..+.++.+.++|+|.|.+-.+. ........+..+++..++|+++...+. +..++ +.+.+ .+.+
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~---------~~~~~-~~~~~---~Gad 101 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVR---------SLEDA-TTLFR---AGAD 101 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCC---------SHHHH-HHHHH---HTCS
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCC---------CHHHH-HHHHH---cCCC
Confidence 4567888899999977553222 222223344445544579988765443 24444 33333 3467
Q ss_pred EEEEcC---CChhhhHHHHHHhc
Q psy13907 497 AVGVNC---LAPHYVESLLTSAG 516 (698)
Q Consensus 497 ~iGlNC---~~p~~~~~~l~~l~ 516 (698)
+|.++. ..|+.+..+.+.+.
T Consensus 102 ~V~i~~~~~~~~~~~~~~~~~~g 124 (253)
T 1h5y_A 102 KVSVNTAAVRNPQLVALLAREFG 124 (253)
T ss_dssp EEEESHHHHHCTHHHHHHHHHHC
T ss_pred EEEEChHHhhCcHHHHHHHHHcC
Confidence 777776 25666666666654
No 179
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=50.97 E-value=1.3e+02 Score=30.56 Aligned_cols=123 Identities=15% Similarity=0.146 Sum_probs=73.6
Q ss_pred HHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEE
Q psy13907 421 HRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGV 500 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGl 500 (698)
..+.++.|.++|+|+|=+ +.|+ +.=+.||..+.++.....+
T Consensus 36 ~~~~~~~l~~~GaD~iEl--------------------GiPf--------SDP~aDGpvIq~a~~rAL~----------- 76 (271)
T 3nav_A 36 SLAIMQTLIDAGADALEL--------------------GMPF--------SDPLADGPTIQGANLRALA----------- 76 (271)
T ss_dssp HHHHHHHHHHTTCSSEEE--------------------ECCC--------CCGGGCCSHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHHcCCCEEEE--------------------CCCC--------CCCCCCCHHHHHHHHHHHH-----------
Confidence 567788899999999854 3332 1123678777755554432
Q ss_pred cCCChhhhHHHHHHhc---CCCCEEE--ecCC----CCCc-------CCCCcccccCCChhhHHHHHHHHHHcCCeEEee
Q psy13907 501 NCLAPHYVESLLTSAG---RDVPLLC--CPNS----GETF-------DPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGG 564 (698)
Q Consensus 501 NC~~p~~~~~~l~~l~---~~~pl~~--yPNa----G~~~-------d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiGG 564 (698)
|....+.....+++++ .+.|+++ |-|- |... -..+|-...|..+++..++.+...+.|+..|==
T Consensus 77 ~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~l 156 (271)
T 3nav_A 77 AKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFI 156 (271)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEE
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 1234455556666654 4667655 6663 2110 012343345667777667777777788877766
Q ss_pred cCCCc-hHHHHHHHhcccc
Q psy13907 565 CCRTN-ADDMKNVNQVPVK 582 (698)
Q Consensus 565 CCGTt-P~hI~al~~~v~~ 582 (698)
|.-|| ++.|+.+.+...+
T Consensus 157 vap~t~~eri~~i~~~~~g 175 (271)
T 3nav_A 157 APPTASDETLRAVAQLGKG 175 (271)
T ss_dssp ECTTCCHHHHHHHHHHCCS
T ss_pred ECCCCCHHHHHHHHHHCCC
Confidence 77655 4777777776544
No 180
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=50.83 E-value=81 Score=31.79 Aligned_cols=150 Identities=15% Similarity=0.112 Sum_probs=80.9
Q ss_pred CCCHHHHHHHHHHHHHHHHh-CCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQ-GGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYA 489 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~-~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~ 489 (698)
..+.+++.+.-.+.++.|.+ .|+|++++=+.... ..++..+++..++||+ .. +..+++....
T Consensus 44 ~~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas---~~~l~~lr~~~~iPVi-gi-------------iepa~~~A~~ 106 (272)
T 1zuw_A 44 PRPEEEVLQYTWELTNYLLENHHIKMLVIACNTAT---AIALDDIQRSVGIPVV-GV-------------IQPGARAAIK 106 (272)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH---HHHHHHHHHHCSSCEE-ES-------------HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhh---HHHHHHHHHHCCCCEE-cc-------------cHHHHHHHHH
Confidence 46789999999999999999 99999998543322 2357788876688964 21 2233433322
Q ss_pred hCCCCceEEEEcCCCh----hhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCC-eEEee
Q psy13907 490 KNPAQLVAVGVNCLAP----HYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGV-KYVGG 564 (698)
Q Consensus 490 ~~~~~~~~iGlNC~~p----~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~-~iiGG 564 (698)
.... .-|||=.+.. ......++....+..+...|..+.......|.+........+.++++.+.+.|+ .||=|
T Consensus 107 ~~~~--~rIgVlaT~~T~~s~~y~~~i~~~~~~~~v~~~~~~~~v~~ve~g~~~~~~~~~~l~~~l~~l~~~~~D~iVLG 184 (272)
T 1zuw_A 107 VTDN--QHIGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDQTADEIVKTSLYPLKDTSIDSLILG 184 (272)
T ss_dssp HCSS--SEEEEEECHHHHHTTHHHHHHHHHCTTCEEEEEECTTHHHHHTSCCCCHHHHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred hcCC--CEEEEEEChhhhhhhHHHHHHHHhCCCCEEEeccCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEC
Confidence 1112 2466655422 234556665543444544554432111123311001122345667777777783 34556
Q ss_pred cCCCchHHHHHHHhcc
Q psy13907 565 CCRTNADDMKNVNQVP 580 (698)
Q Consensus 565 CCGTtP~hI~al~~~v 580 (698)
|-.-.. -...+.+.+
T Consensus 185 CTh~pl-l~~~i~~~~ 199 (272)
T 1zuw_A 185 CTHYPI-LKEAIQRYM 199 (272)
T ss_dssp STTGGG-GHHHHHHHH
T ss_pred ccCHHH-HHHHHHHHc
Confidence 765443 333444433
No 181
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=50.02 E-value=20 Score=37.18 Aligned_cols=54 Identities=20% Similarity=0.132 Sum_probs=30.3
Q ss_pred CccEEeecCCCCceeec-CeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCc----eEEEeccccc
Q psy13907 223 EAPLKAKPNRSLFETYH-GVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENK----LYLIDGGFSS 286 (698)
Q Consensus 223 ~~~~~~~pnag~p~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~----~~i~dG~~gt 286 (698)
+.|+.++++.|.|+... ... .|..--++.. ++|.+-.. .+.+.+ -+|+|=|+|+
T Consensus 140 ~~~vVlmh~~G~p~tm~~~~~---~y~dv~~ev~---~~l~~~i~----~a~~~Gi~~~~IilDPG~Gf 198 (294)
T 2y5s_A 140 NSGLCAMHMLGEPQTMQVGEP---DYGDVVTDVR---DFLAARAQ----ALRDAGVAAERICVDPGFGF 198 (294)
T ss_dssp SCEEEEECCCEETTTTEECCC---CCSSHHHHHH---HHHHHHHH----HHHHTTCCGGGEEEECCTTS
T ss_pred CCCEEEECCCCCCccccccCC---ccccHHHHHH---HHHHHHHH----HHHHcCCChhhEEEeCCCcc
Confidence 78999999999888653 222 3542212222 24443332 233444 3799987664
No 182
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=49.74 E-value=39 Score=35.34 Aligned_cols=62 Identities=11% Similarity=0.081 Sum_probs=42.4
Q ss_pred HHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 86 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 86 qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
+++..+++|+|.|.+.+| ++++++.+++.++. ..++.+|- |-+++.+.+.. ..++|.|++-.
T Consensus 243 ea~eAl~aGaD~I~LDn~-~~~~l~~av~~l~~--~v~ieaSG----------GIt~~~I~~~a----~tGVD~isvGa 304 (320)
T 3paj_A 243 ELEEAISAGADIIMLDNF-SLEMMREAVKINAG--RAALENSG----------NITLDNLKECA----ETGVDYISVGA 304 (320)
T ss_dssp HHHHHHHTTCSEEEEESC-CHHHHHHHHHHHTT--SSEEEEES----------SCCHHHHHHHH----TTTCSEEECTH
T ss_pred HHHHHHHcCCCEEEECCC-CHHHHHHHHHHhCC--CCeEEEEC----------CCCHHHHHHHH----HcCCCEEEECc
Confidence 344444589999999996 57888888887653 45666553 56666665533 26889888754
No 183
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=49.55 E-value=1.1e+02 Score=30.68 Aligned_cols=150 Identities=15% Similarity=0.073 Sum_probs=81.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHh
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAK 490 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~ 490 (698)
.-+.+++.+.-.+.++.|.+.|+|++++=+.... ..++..+++..++||+ .. ...+++.....
T Consensus 44 ~~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas---~~~l~~lr~~~~iPvi-gi-------------~ep~~~~A~~~ 106 (267)
T 2gzm_A 44 PRSREEVRQFTWEMTEHLLDLNIKMLVIACNTAT---AVVLEEMQKQLPIPVV-GV-------------IHPGSRTALKV 106 (267)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHCSSCEE-ES-------------HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhCCCCEE-ee-------------cHHHHHHHHHc
Confidence 4678999999999999999999999998543322 2357788876688965 21 22344433221
Q ss_pred CCCCceEEEEcCCC----hhhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCe-EEeec
Q psy13907 491 NPAQLVAVGVNCLA----PHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVK-YVGGC 565 (698)
Q Consensus 491 ~~~~~~~iGlNC~~----p~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~-iiGGC 565 (698)
... .-|||=.+. .......++..+....+...|..+.......|.+........+.++++.+.+.|+. ||=||
T Consensus 107 ~~~--~rIgVlaT~~T~~~~~y~~~l~~~~~g~~v~~~~~~~~v~~ie~g~~~~~~~~~~l~~~~~~l~~~~~d~iVLGC 184 (267)
T 2gzm_A 107 TNT--YHVGIIGTIGTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFESEMAYEVVRETLQPLKNTDIDTLILGC 184 (267)
T ss_dssp CSS--CEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECTTHHHHHHTTCSSSHHHHHHHHHHHHHHHHSCCSEEEECS
T ss_pred cCC--CEEEEEEChHHhccHHHHHHHHHhCCCCEEeccCCHHHHHHHhCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEcc
Confidence 112 245554432 22345566655434445444544322111223111011234466777777777733 45557
Q ss_pred CCCchHHHHHHHhcc
Q psy13907 566 CRTNADDMKNVNQVP 580 (698)
Q Consensus 566 CGTtP~hI~al~~~v 580 (698)
-.-.. -...+.+.+
T Consensus 185 Th~p~-l~~~i~~~~ 198 (267)
T 2gzm_A 185 THYPI-LGPVIKQVM 198 (267)
T ss_dssp TTGGG-GHHHHHHHH
T ss_pred cChHH-HHHHHHHHc
Confidence 55443 344444444
No 184
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=49.47 E-value=76 Score=33.48 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHhCC--CCEEEecc-----cCCHHHHHHHHHHHHhcCCCeEEEE-EEec
Q psy13907 417 LIDYHRPRIEALIQGG--IDLLAIET-----LPAQEEAMVLAELIKEYPGLKAWIS-FSCK 469 (698)
Q Consensus 417 l~~~y~~qi~~L~~~G--vDlll~ET-----i~~~~Eakaa~~a~~~~~~~Pv~iS-~t~~ 469 (698)
-.+.+.+.++.|.+.| +|.|-+.. .++..+.+.+++.+.. .++||||| +.+.
T Consensus 200 k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~-~Gl~i~iTElDi~ 259 (356)
T 2uwf_A 200 KRDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTS-LGLDNQVTELDMS 259 (356)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHh-cCCcEEEEecccc
Confidence 3566788999998888 59987653 3788999988888886 48999999 4454
No 185
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=49.35 E-value=18 Score=38.12 Aligned_cols=93 Identities=12% Similarity=-0.061 Sum_probs=52.0
Q ss_pred CCCCEEEEecCcCHHHHH----HHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcCCChh
Q psy13907 93 GGIDLLAIETLPAQEEAM----VLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPH 168 (698)
Q Consensus 93 ~GVD~il~ETi~~l~Ea~----aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC~~p~ 168 (698)
+|++++.-|.+..-..+. .+++ +.. .+.|+++++.-. +-..+.++++.+. ..++|+|-|||..|.
T Consensus 27 Gg~gli~te~~~~~~~~~~~~~~~~~-~~~-~~~p~~vQL~g~------~p~~~~~aA~~a~---~~G~D~IeIn~gcP~ 95 (350)
T 3b0p_A 27 SLGVRLYTEMTVDQAVLRGNRERLLA-FRP-EEHPIALQLAGS------DPKSLAEAARIGE---AFGYDEINLNLGCPS 95 (350)
T ss_dssp CSSSBEECCCEEHHHHHHSCHHHHHC-CCG-GGCSEEEEEECS------CHHHHHHHHHHHH---HTTCSEEEEEECCCS
T ss_pred CCCCEEEeCCEEechhhcCCHHHHhc-cCC-CCCeEEEEeCCC------CHHHHHHHHHHHH---HcCCCEEEECCcCCC
Confidence 668999999775322111 1111 111 468999999621 1122344444442 368999999998754
Q ss_pred hhHHHHHHhHhhcccccccccc-cccCCChHHHHHHHHHHHHc
Q psy13907 169 YVESLLTSAEVEGQSLELPVNN-TLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 169 ~i~~~l~~~~~~~~~~~~p~~~-~~~~~gP~~~~~~~~~l~~~ 210 (698)
.-.. ++ .+ +.+..-|+.+.++++.+.+.
T Consensus 96 ~~~~-----~d---------~~G~~l~~~~~~~~eiv~av~~~ 124 (350)
T 3b0p_A 96 EKAQ-----EG---------GYGACLLLDLARVREILKAMGEA 124 (350)
T ss_dssp HHHH-----HT---------TCGGGGGGCHHHHHHHHHHHHHH
T ss_pred CcCc-----CC---------CcchhHHhCHHHHHHHHHHHHHH
Confidence 2111 00 01 12234678888888888775
No 186
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=49.29 E-value=2.6e+02 Score=29.42 Aligned_cols=226 Identities=14% Similarity=0.162 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEE--ecC
Q psy13907 315 QAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAG--SLG 392 (698)
Q Consensus 315 e~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAG--siG 392 (698)
+.+.+.-++-+++|-.-|.. |.......++..|-....-..+...|++..|++.. ...|.. ++-
T Consensus 73 d~l~~~~~~~~~lGi~av~L--Fgv~~p~~KD~~gs~A~~~~g~v~rAir~iK~~~P------------~l~VitDVcLc 138 (356)
T 3obk_A 73 EDLLKEVGEARSYGIKAFML--FPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFP------------DVLLLADVALD 138 (356)
T ss_dssp HHHHHHHHHHHHTTCCEEEE--EEECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHST------------TCEEEEEECSG
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecCCCcccCCcccccccCCCChHHHHHHHHHHHCC------------CCEEEEeeccc
Confidence 44445556678888664433 33322233332232111112367777777665532 234443 466
Q ss_pred CcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHh--cCCCeEEEEEEec-
Q psy13907 393 SYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE--YPGLKAWISFSCK- 469 (698)
Q Consensus 393 P~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~--~~~~Pv~iS~t~~- 469 (698)
||...=+.|.-... .+.+.-|+-.+.+.+|+-...++|+|++.-=-|-|- ...++..++.+ +.+.|+| |-+.+
T Consensus 139 ~YT~HGHcGil~~~--~g~V~ND~Tl~~Lak~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~v~IM-sYsaKy 214 (356)
T 3obk_A 139 PYSSMGHDGVVDEQ--SGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDG-RVSAIRESLDMEGCTDTSIL-AYSCKY 214 (356)
T ss_dssp GGBTTCCSSCBCTT--TCCBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTSEEE-EEEEEB
T ss_pred cccCCCcceeeeCC--CCCCCCHHHHHHHHHHHHHHHHcCCCeEeccccccC-HHHHHHHHHHHCCCCCccee-hhHHHH
Confidence 77643333322110 024788999999999999999999999999888876 45777778775 4457766 66543
Q ss_pred -------------CC----C--c--cCCCCcHHHHHHHHHHhCCCCceEEEEcCCChhhhHHHHHHhc--CCCCEEEecC
Q psy13907 470 -------------DE----K--H--TCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAG--RDVPLLCCPN 526 (698)
Q Consensus 470 -------------~~----g--~--l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~--~~~pl~~yPN 526 (698)
+. | + -++-..-.+++..+......+.+.|.|-=..| .+.+++.++ .+.|+.+|=-
T Consensus 215 ASafYGPFRdAa~Sa~p~~GDRktYQmdpaN~~EAlrE~~lDi~EGAD~vMVKPal~--YLDIi~~vk~~~~~PvaaYqV 292 (356)
T 3obk_A 215 ASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLP--YLDVLAKIREKSKLPMVAYHV 292 (356)
T ss_dssp CCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHTTCSEEEEESSGG--GHHHHHHHHHHCSSCEEEEEC
T ss_pred hhhccchhhHHhcCCCCCCCCccccCCCCCCHHHHHHHHHhhHhcCCCEEEecCCCc--HHHHHHHHHhcCCCCEEEEEc
Confidence 11 0 0 11111223444433222234566777765443 344444444 6899999999
Q ss_pred CCCCc----CCCCcccccCCChhhHHHHHHHHHHcCCeEEe
Q psy13907 527 SGETF----DPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVG 563 (698)
Q Consensus 527 aG~~~----d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiG 563 (698)
+|+-- -...| |. + ....+.+....+..+|+.+|=
T Consensus 293 SGEYAMikAAa~~G-wi-D-~~~~v~Esl~~~kRAGAd~Ii 330 (356)
T 3obk_A 293 SGEYAMLKAAAEKG-YI-S-EKDTVLEVLKSFRRAGADAVA 330 (356)
T ss_dssp HHHHHHHHHHHHHT-SS-C-HHHHHHHHHHHHHHHTCSEEE
T ss_pred cHHHHHHHHHHHcC-Cc-c-HHHHHHHHHHHHHHcCCCEEe
Confidence 88521 01234 62 1 123456777778888987764
No 187
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=48.97 E-value=89 Score=30.86 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=22.1
Q ss_pred HHHHHhCCCCEEEecccCCHH--HHHHHHHHHHhcC--CCeEEEEEEec
Q psy13907 425 IEALIQGGIDLLAIETLPAQE--EAMVLAELIKEYP--GLKAWISFSCK 469 (698)
Q Consensus 425 i~~L~~~GvDlll~ETi~~~~--Eakaa~~a~~~~~--~~Pv~iS~t~~ 469 (698)
++.+.+.|+|.+++-+..--. +...+.++++.+. .-.+++++.+.
T Consensus 89 i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~ 137 (266)
T 2w6r_A 89 FLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAK 137 (266)
T ss_dssp HHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEE
T ss_pred HHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEE
Confidence 445556799999987754311 3333333333332 23556666653
No 188
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=48.88 E-value=1.1e+02 Score=32.17 Aligned_cols=51 Identities=22% Similarity=0.256 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHhCC--CCEEEEec-----CcCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy13907 80 IDYHRPRIEALIQGG--IDLLAIET-----LPAQEEAMVLAELIKEYPGLKAWIS-FSCK 131 (698)
Q Consensus 80 ~~~~~~qi~~l~~~G--VD~il~ET-----i~~l~Ea~aa~~a~~~~~~~Pv~iS-ft~~ 131 (698)
.+.+..+++.|.+.| +|.|-+.. .|+..+++..++.+.. .++||||| +-+.
T Consensus 200 ~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~-~Glpi~iTEldv~ 258 (356)
T 2dep_A 200 RDILYELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAG-LGLDNIITELDMS 258 (356)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCccEEEeeeeecCCCCCHHHHHHHHHHHHh-CCCeEEEeeceec
Confidence 355777888887776 69998863 3788999999988887 58999998 4443
No 189
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=47.94 E-value=42 Score=35.77 Aligned_cols=66 Identities=21% Similarity=0.200 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCCCEEEEecCc-CHHHHHHHHHHHHhc-CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEE
Q psy13907 83 HRPRIEALIQGGIDLLAIETLP-AQEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 160 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi~-~l~Ea~aa~~a~~~~-~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aI 160 (698)
+.++++.++++|||+|.+.|.. +..+....++.+++. +++|+++.. ..+.+++..... .++|+|
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~----------v~t~e~A~~a~~----aGAD~I 174 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGARALIE----AGVSAV 174 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE----------ECSHHHHHHHHH----HTCSEE
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee----------eCCHHHHHHHHH----cCCCEE
Confidence 3567889999999999998753 344555566666653 478888742 224555554332 478888
Q ss_pred EE
Q psy13907 161 GV 162 (698)
Q Consensus 161 Gi 162 (698)
.+
T Consensus 175 ~v 176 (366)
T 4fo4_A 175 KV 176 (366)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 190
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=47.68 E-value=1.4e+02 Score=33.44 Aligned_cols=94 Identities=11% Similarity=0.102 Sum_probs=60.1
Q ss_pred HHHHHHhCCCCEEEE-ecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 86 RIEALIQGGIDLLAI-ETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 86 qi~~l~~~GVD~il~-ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
-++.+.+.|+|.|-+ -..+++..++.+++++++ .++.+-+++++.+.. ..+++.+++.+......+++.|.+-=
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~-~G~~v~~~i~~~~~~----~~~~e~~~~~a~~l~~~Gad~I~L~D 196 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKK-AGKHAQGTICYTISP----VHTVEGYVKLAGQLLDMGADSIALKD 196 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHH-TTCEEEEEEECCCST----TCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHH-CCCeEEEEEEeeeCC----CCCHHHHHHHHHHHHHcCCCEEEeCC
Confidence 455566789998764 356678888999999998 577776666655432 33555444433222235777666533
Q ss_pred CChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHc
Q psy13907 165 LAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 165 ~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~ 210 (698)
+. |.. -|.++.++++.+.+.
T Consensus 197 T~------------------------G~~--~P~~v~~lv~~l~~~ 216 (539)
T 1rqb_A 197 MA------------------------ALL--KPQPAYDIIKAIKDT 216 (539)
T ss_dssp TT------------------------CCC--CHHHHHHHHHHHHHH
T ss_pred CC------------------------CCc--CHHHHHHHHHHHHHh
Confidence 33 111 499999999998875
No 191
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=47.64 E-value=1.2e+02 Score=29.97 Aligned_cols=149 Identities=13% Similarity=0.052 Sum_probs=81.5
Q ss_pred CCCCHHHHHHH---HHHHHHHHHhCCCCEEEec-c---cCC-HHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHH
Q psy13907 410 DSTTPQELIDY---HRPRIEALIQGGIDLLAIE-T---LPA-QEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFG 481 (698)
Q Consensus 410 ~~~t~del~~~---y~~qi~~L~~~GvDlll~E-T---i~~-~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~ 481 (698)
+.++.+++.++ ..+-++.|.++|+|+|++= | +.. ..-.+.+...+++..++|+. + +..
T Consensus 41 ~~~t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~-~-------------~~~ 106 (240)
T 3ixl_A 41 GSVTPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCT-T-------------MST 106 (240)
T ss_dssp CCSSHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEE-E-------------HHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEE-C-------------HHH
Confidence 45777887766 3566788889999999985 2 211 12223455666655678975 1 122
Q ss_pred HHHHHHHHhCCCCceEEEEcCCChhhhHH-HHHHhc-CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHH-H-HHc
Q psy13907 482 LIARDVYAKNPAQLVAVGVNCLAPHYVES-LLTSAG-RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPR-W-LDT 557 (698)
Q Consensus 482 ~~v~~~~~~~~~~~~~iGlNC~~p~~~~~-~l~~l~-~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~-~-~~~ 557 (698)
.+++++... +..-||+=..-...+.. +.+.+. ..+.+......|...+...| ..+++.+.+.+++ . ...
T Consensus 107 A~~~al~~~---g~~rvglltpy~~~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~ 179 (240)
T 3ixl_A 107 AVLNGLRAL---GVRRVALATAYIDDVNERLAAFLAEESLVPTGCRSLGITGVEAMA----RVDTATLVDLCVRAFEAAP 179 (240)
T ss_dssp HHHHHHHHT---TCSEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEECCCCCHHHHH----TCCHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHh---CCCEEEEEeCChHHHHHHHHHHHHHCCCEEeccccCCCCCcchhh----cCCHHHHHHHHHHHhhcCC
Confidence 455555432 23346665533333222 223343 45555444334433211222 3467788888888 5 444
Q ss_pred C--CeEEeecCCCchH-HHHHHHhcc
Q psy13907 558 G--VKYVGGCCRTNAD-DMKNVNQVP 580 (698)
Q Consensus 558 G--~~iiGGCCGTtP~-hI~al~~~v 580 (698)
| +-++| |-.-..- .|..+.+.+
T Consensus 180 ~adaivL~-CT~l~~l~~i~~le~~l 204 (240)
T 3ixl_A 180 DSDGILLS-SGGLLTLDAIPEVERRL 204 (240)
T ss_dssp TCSEEEEE-CTTSCCTTHHHHHHHHH
T ss_pred CCCEEEEe-CCCCchhhhHHHHHHHh
Confidence 5 55566 7665443 466666665
No 192
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=47.49 E-value=1.2e+02 Score=31.84 Aligned_cols=50 Identities=20% Similarity=0.283 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhCC--CCEEEEec-----CcCHHHHHHHHHHHH--hcCCCeEEEE-EEEc
Q psy13907 81 DYHRPRIEALIQGG--IDLLAIET-----LPAQEEAMVLAELIK--EYPGLKAWIS-FSCK 131 (698)
Q Consensus 81 ~~~~~qi~~l~~~G--VD~il~ET-----i~~l~Ea~aa~~a~~--~~~~~Pv~iS-ft~~ 131 (698)
+.+..+++.|.+.| +|.|-+.. .|+..+++.+++.+. . .++||+|| +-+.
T Consensus 192 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~a~~~-~Gl~i~ITElDv~ 251 (348)
T 1w32_A 192 TALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALS-PTLKIKITELDVR 251 (348)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTC-SSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHHhccc-CCCeEEEEeCccc
Confidence 45677888888888 59998864 378899999998888 6 58999998 4444
No 193
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=47.40 E-value=2.4e+02 Score=29.35 Aligned_cols=81 Identities=12% Similarity=0.168 Sum_probs=44.6
Q ss_pred HHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCC--cHHHHHHHHHHhCCCCceEEEEcC
Q psy13907 425 IEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGD--KFGLIARDVYAKNPAQLVAVGVNC 502 (698)
Q Consensus 425 i~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~--~l~~~v~~~~~~~~~~~~~iGlNC 502 (698)
+..+.+.|+|.|-++...|+.+++..+ .+. +.+...++. .++.|+ .+.+.++.+.+..+.+-..++..|
T Consensus 269 l~~l~~~g~d~i~~d~~~dl~~a~~~~------g~~-~~l~Gnldp--~~L~gt~e~i~~~v~~~l~~~g~~g~I~~~gh 339 (367)
T 1r3s_A 269 LEELAQAGYEVVGLDWTVAPKKARECV------GKT-VTLQGNLDP--CALYASEEEIGQLVKQMLDDFGPHRYIANLGH 339 (367)
T ss_dssp HHHHTTSSCSEEECCTTSCHHHHHHHH------CSS-SEEEEEECG--GGGGSCHHHHHHHHHHHHHHHCSSSEEEEESS
T ss_pred HHHHHhcCCCEEEeCCCCCHHHHHHHc------CCC-eEEEeCCCh--HHhcCCHHHHHHHHHHHHHHhCCCCeeecCCC
Confidence 345778899999999878888766542 222 345666654 344443 333334444332122345566667
Q ss_pred -C----ChhhhHHHHHH
Q psy13907 503 -L----APHYVESLLTS 514 (698)
Q Consensus 503 -~----~p~~~~~~l~~ 514 (698)
. .++.+..+++.
T Consensus 340 gi~~~~p~env~a~v~~ 356 (367)
T 1r3s_A 340 GLYPDMDPEHVGAFVDA 356 (367)
T ss_dssp CCCTTCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 2 34555555443
No 194
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=46.82 E-value=43 Score=33.99 Aligned_cols=50 Identities=16% Similarity=0.215 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
.-+.+++.++-.+-++.|.+.|+|+|++=. -.-=..+++.+++..++|++
T Consensus 46 ~ks~~~i~~~~~~~~~~L~~~g~~~IVIAC---NTa~~~al~~lr~~~~iPvi 95 (269)
T 3ist_A 46 PRDKEEVAKFTWEMTNFLVDRGIKMLVIAC---NTATAAALYDIREKLDIPVI 95 (269)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTCSEEEECC---HHHHHHHHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeC---CCccHHHHHHHHHhcCCCEE
Confidence 367899999999999999999999999643 21112246667765678976
No 195
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=46.41 E-value=47 Score=35.32 Aligned_cols=154 Identities=15% Similarity=0.159 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEE-ecC-c----------------CH-HHHHHHHHHHHhc----C-CCeEEEEEEEc
Q psy13907 76 PQELIDYHRPRIEALIQGGIDLLAI-ETL-P----------------AQ-EEAMVLAELIKEY----P-GLKAWISFSCK 131 (698)
Q Consensus 76 ~eel~~~~~~qi~~l~~~GVD~il~-ETi-~----------------~l-~Ea~aa~~a~~~~----~-~~Pv~iSft~~ 131 (698)
.+++.+.|++-++.|.++|+++|-+ |+. . +. .-+..++++++.. + +.++.+.+...
T Consensus 162 ~~~la~a~~~ei~~l~~aG~~~IQiDeP~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~~~~i~~HiC~g 241 (375)
T 1ypx_A 162 ANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICRG 241 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCCTTCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEecCCchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecc
Confidence 3567788888899999999997764 421 0 11 1124455555543 2 46777777543
Q ss_pred CC--CccCCCCCHHHHHHHHHhhCCCCceEEEEcCCChhh-hHHHHHHhHhhccc--ccccccccccCCChHHHHHHHHH
Q psy13907 132 DE--KHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHY-VESLLTSAEVEGQS--LELPVNNTLISRKPIQLLSIELE 206 (698)
Q Consensus 132 ~~--g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC~~p~~-i~~~l~~~~~~~~~--~~~p~~~~~~~~gP~~~~~~~~~ 206 (698)
+- .+..+|. ...++..+. ...+++++.+-+..... -...|+.+....+. +++-+.-...-+.|+.+.+.+++
T Consensus 242 n~~s~~~~~g~-~~~i~~~l~--~~~~~d~i~lE~~~~r~g~~e~L~~~~~~~~~v~lGvvd~~~~~~e~~e~v~~ri~~ 318 (375)
T 1ypx_A 242 NFRSTWIAEGG-YGPVAETLF--GKLNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEE 318 (375)
T ss_dssp ----------C-CSGGGHHHH--TTCCCSEEEEECCSCC---CCTTCCCCCTTCEEEEEEECSSSCC-CCSHHHHHHHHH
T ss_pred ccCCccccccc-hHHHHHHHH--hhCCCCEEEEEecCCCCCcHHHHHHhhhcCCeEEEeeecCcCCCCCCHHHHHHHHHH
Confidence 21 1222332 234445553 13689999999754221 11122222111111 12212222345789999999998
Q ss_pred HHHcCCCCCCCcCCCcCccEEeecCCCCceeecCee
Q psy13907 207 LAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVF 242 (698)
Q Consensus 207 l~~~~~~~~~~~~~~~~~~~~~~pnag~p~~~~~~~ 242 (698)
..+. +|.+ -|++-|+-|+....+|.+
T Consensus 319 a~~~---------v~~e-~l~lsPdCGl~s~~~g~~ 344 (375)
T 1ypx_A 319 ASEI---------VPLS-QLRLSPQCGFASTEEGNI 344 (375)
T ss_dssp HHHH---------SCGG-GEEEEESSCCC-------
T ss_pred HHHh---------cCcc-ceEecCCCCccccccCCC
Confidence 8776 2333 389999999987666544
No 196
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=46.13 E-value=2.3e+02 Score=27.94 Aligned_cols=76 Identities=8% Similarity=-0.011 Sum_probs=42.3
Q ss_pred hhhHHHHHHhc--CCCCEEE--ecCCCCCc-------CCCCcccccCCChhhHHHHHHHHHHcCCe-EEeecCCCchHHH
Q psy13907 506 HYVESLLTSAG--RDVPLLC--CPNSGETF-------DPGQRIWMNKDSVPSVDTYVPRWLDTGVK-YVGGCCRTNADDM 573 (698)
Q Consensus 506 ~~~~~~l~~l~--~~~pl~~--yPNaG~~~-------d~~~g~~~~~~~p~~~a~~~~~~~~~G~~-iiGGCCGTtP~hI 573 (698)
+.....++.++ .+.|+++ |.|--..+ -..+|-...+...++..++.....+.|.. +++-.+.|+++.+
T Consensus 80 ~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~ 159 (262)
T 1rd5_A 80 DAVLEMLREVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRM 159 (262)
T ss_dssp HHHHHHHHHHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHH
Confidence 44455666665 5788776 56621000 01233223455555666666666677865 4555566777777
Q ss_pred HHHHhccc
Q psy13907 574 KNVNQVPV 581 (698)
Q Consensus 574 ~al~~~v~ 581 (698)
+++.+...
T Consensus 160 ~~~~~~~~ 167 (262)
T 1rd5_A 160 KEITKASE 167 (262)
T ss_dssp HHHHHHCC
T ss_pred HHHHhcCC
Confidence 77766543
No 197
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=45.53 E-value=1.1e+02 Score=31.63 Aligned_cols=100 Identities=15% Similarity=-0.028 Sum_probs=55.4
Q ss_pred HHHhCCCCEEEEecCcCH---------------------------HHHHHHHHHHHhc-CCCeEEEEEEEcCCCccCCCC
Q psy13907 89 ALIQGGIDLLAIETLPAQ---------------------------EEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGD 140 (698)
Q Consensus 89 ~l~~~GVD~il~ETi~~l---------------------------~Ea~aa~~a~~~~-~~~Pv~iSft~~~~g~l~~G~ 140 (698)
.+.+.|+.++..||++-- ...+..++.+++. .+.|+.+|+.-.++ +....
T Consensus 73 ~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~--~~i~~ 150 (336)
T 1f76_A 73 ALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKD--TPVEQ 150 (336)
T ss_dssp HHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCCCSEEEEEECCCTT--SCGGG
T ss_pred HHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhcccCCcEEEEecCCCC--Ccccc
Confidence 345689999998987521 1124444555543 24688888743221 11112
Q ss_pred CHHHHHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHc
Q psy13907 141 KFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 141 ~~~~~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~ 210 (698)
.+++..+.+.... .++|+|-+|+++|..= . ...-..|..+.++++.+++.
T Consensus 151 ~~~~~~~aa~~~~-~g~d~iein~~sP~~~----------g---------~~~~~~~~~~~~il~~vr~~ 200 (336)
T 1f76_A 151 GKDDYLICMEKIY-AYAGYIAINISSPNTP----------G---------LRTLQYGEALDDLLTAIKNK 200 (336)
T ss_dssp THHHHHHHHHHHG-GGCSEEEEECCCSSST----------T---------GGGGGSHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHh-ccCCEEEEEccCCCCC----------C---------cccccCHHHHHHHHHHHHHH
Confidence 2444444432222 2789999999876410 0 00112577788888887765
No 198
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=45.40 E-value=69 Score=31.63 Aligned_cols=91 Identities=5% Similarity=0.044 Sum_probs=57.0
Q ss_pred HHHHHHHHHhCCCCEEEec-----ccCCHHHHHHHHHHHHhcC-CCeEEEEEEecCCCcc--------------CCCC-c
Q psy13907 421 HRPRIEALIQGGIDLLAIE-----TLPAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHT--------------CHGD-K 479 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~E-----Ti~~~~Eakaa~~a~~~~~-~~Pv~iS~t~~~~g~l--------------~~G~-~ 479 (698)
..+.++.+.++|+|.+-+- .+|++..-..+++++++.+ ++|+-+-+-+.+.++. .... +
T Consensus 20 l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~Ad~itvH~ea~~~~ 99 (227)
T 1tqx_A 20 LAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKTSNQLTFHFEALNED 99 (227)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTTSSEEEEEGGGGTTC
T ss_pred HHHHHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHhCCEEEEeecCCccC
Confidence 3456777888999886443 2356655567888888876 8999888888774421 1223 4
Q ss_pred HHHHHH---HHHHhCCCCceEEEEcC-CChhhhHHHHH
Q psy13907 480 FGLIAR---DVYAKNPAQLVAVGVNC-LAPHYVESLLT 513 (698)
Q Consensus 480 l~~~v~---~~~~~~~~~~~~iGlNC-~~p~~~~~~l~ 513 (698)
+..+++ .+.+ ..--.++-+|. +..+.+.+++.
T Consensus 100 ~~~~i~~~~~i~~--~G~k~gvalnp~tp~~~~~~~l~ 135 (227)
T 1tqx_A 100 TERCIQLAKEIRD--NNLWCGISIKPKTDVQKLVPILD 135 (227)
T ss_dssp HHHHHHHHHHHHT--TTCEEEEEECTTSCGGGGHHHHT
T ss_pred HHHHHHHHHHHHH--cCCeEEEEeCCCCcHHHHHHHhh
Confidence 566666 6643 22234566777 45556666654
No 199
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=45.17 E-value=2.2e+02 Score=28.37 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=52.4
Q ss_pred HHHHHHHHHhCCCCEEEecccCC----------------------HHHHHHHHHHHHhcC-CCeEEEEEEecCCCccCCC
Q psy13907 421 HRPRIEALIQGGIDLLAIETLPA----------------------QEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHG 477 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi~~----------------------~~Eakaa~~a~~~~~-~~Pv~iS~t~~~~g~l~~G 477 (698)
..+.++.|.++|+|+|-+-+=++ +......+..+++.. ++|+.+ ++..+ .-...|
T Consensus 33 ~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~-m~y~n-~v~~~g 110 (262)
T 2ekc_A 33 SLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLL-MTYYN-PIFRIG 110 (262)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEE-ECCHH-HHHHHC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEE-EecCc-HHHHhh
Confidence 46678889999999998876332 122233456666544 789876 21111 000111
Q ss_pred CcHHHHHHHHHHhCCCCceEEEEcCCChhhhHHHHHHhc
Q psy13907 478 DKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAG 516 (698)
Q Consensus 478 ~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~ 516 (698)
+...++.+.+ .+.+++-+.+..++.+..+++.+.
T Consensus 111 --~~~f~~~~~~---aG~dgvii~dl~~ee~~~~~~~~~ 144 (262)
T 2ekc_A 111 --LEKFCRLSRE---KGIDGFIVPDLPPEEAEELKAVMK 144 (262)
T ss_dssp --HHHHHHHHHH---TTCCEEECTTCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHH---cCCCEEEECCCCHHHHHHHHHHHH
Confidence 2334444433 566777788877787777776665
No 200
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=45.10 E-value=1.1e+02 Score=32.53 Aligned_cols=29 Identities=10% Similarity=0.121 Sum_probs=20.6
Q ss_pred cccChHHHHHHHHHHHHHhcchhhccccc
Q psy13907 310 LHSNRQAVIDTHRDYVRAGCDIVTTNTYQ 338 (698)
Q Consensus 310 ~l~~Pe~V~~iH~~yl~AGAdII~TNTf~ 338 (698)
.+..++...+.-+..++||+|+|+.++-.
T Consensus 94 ~~g~~~~~~e~~~~a~~aGvdvI~id~a~ 122 (361)
T 3r2g_A 94 SVGCTENELQRAEALRDAGADFFCVDVAH 122 (361)
T ss_dssp EECSSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred EcCCCHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 34344555566788899999999887643
No 201
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=45.07 E-value=2.5e+02 Score=28.01 Aligned_cols=89 Identities=15% Similarity=0.116 Sum_probs=52.1
Q ss_pred HHHHHHHHHhCCCCEEEecccCC----------------------HHHHHHHHHHHHhc-CCCeEEEEEEecCCCccCCC
Q psy13907 421 HRPRIEALIQGGIDLLAIETLPA----------------------QEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHG 477 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi~~----------------------~~Eakaa~~a~~~~-~~~Pv~iS~t~~~~g~l~~G 477 (698)
..+.++.|.++|+|+|-+-.-++ +...-..+..+++. .++|+.+-...+ .-...|
T Consensus 33 ~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n--~v~~~g 110 (268)
T 1qop_A 33 SLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYAN--LVFNNG 110 (268)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHH--HHHTTC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEccc--HHHHhh
Confidence 45778899999999998876332 22233456667765 688976521111 111112
Q ss_pred CcHHHHHHHHHHhCCCCceEEEEcCCChhhhHHHHHHhc
Q psy13907 478 DKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAG 516 (698)
Q Consensus 478 ~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~ 516 (698)
+...++.+.+ .+.+++-+....++++..+++.+.
T Consensus 111 --~~~~~~~~~~---aGadgii~~d~~~e~~~~~~~~~~ 144 (268)
T 1qop_A 111 --IDAFYARCEQ---VGVDSVLVADVPVEESAPFRQAAL 144 (268)
T ss_dssp --HHHHHHHHHH---HTCCEEEETTCCGGGCHHHHHHHH
T ss_pred --HHHHHHHHHH---cCCCEEEEcCCCHHHHHHHHHHHH
Confidence 2344555543 345666677766666666666655
No 202
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=45.02 E-value=1.2e+02 Score=31.75 Aligned_cols=91 Identities=13% Similarity=0.077 Sum_probs=52.4
Q ss_pred CCCHHH---HHHHHHHHHHHHHhCCCCEEEEecC----------c-----------CHH----HHHHHHHHHHhcCCCeE
Q psy13907 73 STTPQE---LIDYHRPRIEALIQGGIDLLAIETL----------P-----------AQE----EAMVLAELIKEYPGLKA 124 (698)
Q Consensus 73 ~~s~ee---l~~~~~~qi~~l~~~GVD~il~ETi----------~-----------~l~----Ea~aa~~a~~~~~~~Pv 124 (698)
.+|.+| +.+.|.+-++...++|.|.|=+=-- | +++ =+..+++++++..+.||
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv 212 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPL 212 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCce
Confidence 466555 4556666666677889998754321 1 111 24556677776558899
Q ss_pred EEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcCC
Q psy13907 125 WISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCL 165 (698)
Q Consensus 125 ~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC~ 165 (698)
++-++..+. ...|.+.++.+..+......+++.|=+-..
T Consensus 213 ~vRls~~~~--~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g 251 (340)
T 3gr7_A 213 FVRISASDY--HPDGLTAKDYVPYAKRMKEQGVDLVDVSSG 251 (340)
T ss_dssp EEEEESCCC--STTSCCGGGHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEeccccc--cCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 998886532 223555444433222222367887776543
No 203
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=44.97 E-value=2.8e+02 Score=28.74 Aligned_cols=67 Identities=10% Similarity=-0.046 Sum_probs=41.2
Q ss_pred HHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEc-------CCCccCCCCCHHHHHHHHHhhCCC
Q psy13907 83 HRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCK-------DEKHTCHGDKFGLIARDVYAKNPA 155 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~-------~~g~l~~G~~~~~~~~~l~~~~~~ 155 (698)
-+..+..+.+.|||.++. -+.+.+ - +.++-.+.++.++-|+.-. +...-..|.+++++++ .
T Consensus 73 l~~~~~~~~~~Gvdavl~--~~gi~~--d-~~Li~~L~~~tv~gs~~~ggl~g~~~~~d~~~~~~sVe~Avr-------l 140 (307)
T 3fok_A 73 LERMAIALSRPGVDGVLG--TPDIID--D-LAALGLLDDKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMVD-------R 140 (307)
T ss_dssp HHHHHHHHHSTTCCEEEE--CHHHHH--H-HHHTTCCTTCEEEEECCCCSCTTCTTTTSCCCCSCCHHHHHH-------H
T ss_pred HHHHHHHHhccCCCEEEE--Ccchhh--c-ccceEEecCcccccccCccccccCCCCccccccccCHHHHHH-------C
Confidence 355677788999999986 233321 1 2233344567777777641 2223346778988875 4
Q ss_pred CceEEE
Q psy13907 156 QLVAVG 161 (698)
Q Consensus 156 ~~~aIG 161 (698)
++|+|+
T Consensus 141 GADaV~ 146 (307)
T 3fok_A 141 GVDFAK 146 (307)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 778877
No 204
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=44.74 E-value=3.1e+02 Score=29.02 Aligned_cols=127 Identities=17% Similarity=0.184 Sum_probs=77.6
Q ss_pred HHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCCcCCCCCCC
Q psy13907 322 RDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDG 401 (698)
Q Consensus 322 ~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP~~~~l~~~ 401 (698)
+.-+++|+|+|.... .+|..... .++++.+++.+....+++.||+.- +...|..++- +.
T Consensus 81 ~~a~~~g~~~v~i~~-~~s~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g------------~~~~v~~~~e-------d~ 139 (382)
T 2ztj_A 81 KVAVETGVQGIDLLF-GTSKYLRA-PHGRDIPRIIEEAKEVIAYIREAA------------PHVEVRFSAE-------DT 139 (382)
T ss_dssp HHHHHTTCSEEEEEE-CC---------CCCHHHHHHHHHHHHHHHHHHC------------TTSEEEEEET-------TT
T ss_pred HHHHHcCCCEEEEEe-ccCHHHHH-HhCCCHHHHHHHHHHHHHHHHHcC------------CCEEEEEEEE-------eC
Confidence 345678999876532 33433333 457777776676677777666542 2244555432 11
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-cc--CCHHHHHHHHHHHHhc--CCCeEEEEEEecCCCccCC
Q psy13907 402 SEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE-TL--PAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCH 476 (698)
Q Consensus 402 ~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~E-Ti--~~~~Eakaa~~a~~~~--~~~Pv~iS~t~~~~g~l~~ 476 (698)
+ ..+. +++.+.++.+.+. +|.|-+= |+ ....++...+.++++. .+.| |++-+.+ -.
T Consensus 140 ------~--~~~~----~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~--i~~H~Hn----d~ 200 (382)
T 2ztj_A 140 ------F--RSEE----QDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVD--IEFHGHN----DT 200 (382)
T ss_dssp ------T--TSCH----HHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSE--EEEEEBC----TT
T ss_pred ------C--CCCH----HHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCe--EEEEeCC----Cc
Confidence 0 1222 5677888888999 9988553 43 4678888888888875 4555 6888877 56
Q ss_pred CCcHHHHHHHHH
Q psy13907 477 GDKFGLIARDVY 488 (698)
Q Consensus 477 G~~l~~~v~~~~ 488 (698)
|..+..++.++.
T Consensus 201 GlAvAN~laAv~ 212 (382)
T 2ztj_A 201 GCAIANAYEAIE 212 (382)
T ss_dssp SCHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 877777777774
No 205
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=44.49 E-value=1e+02 Score=30.92 Aligned_cols=99 Identities=15% Similarity=0.125 Sum_probs=60.5
Q ss_pred HHHHHHHHhCCCCEEEecccC--------CHHHHHHHHHHHHhc---CCCeEEEEEEecC--CCccCCCCcHHHHHHHHH
Q psy13907 422 RPRIEALIQGGIDLLAIETLP--------AQEEAMVLAELIKEY---PGLKAWISFSCKD--EKHTCHGDKFGLIARDVY 488 (698)
Q Consensus 422 ~~qi~~L~~~GvDlll~ETi~--------~~~Eakaa~~a~~~~---~~~Pv~iS~t~~~--~g~l~~G~~l~~~v~~~~ 488 (698)
.+-++.|.++|++.+-+|--. +..|...-++++.+. .+.|++|-.-... .|+......+.++++...
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 455677888999999999763 334444444444431 1578777665432 011100123777777664
Q ss_pred HhCCCCceEEEEcCCC-hhhhHHHHHHhcCCCCEE
Q psy13907 489 AKNPAQLVAVGVNCLA-PHYVESLLTSAGRDVPLL 522 (698)
Q Consensus 489 ~~~~~~~~~iGlNC~~-p~~~~~~l~~l~~~~pl~ 522 (698)
....++.++|=+-|.. ++.+..+.+.++ .|+.
T Consensus 176 a~~eAGAd~i~~e~~~~~~~~~~i~~~~~--~P~n 208 (255)
T 2qiw_A 176 LMEQAGARSVYPVGLSTAEQVERLVDAVS--VPVN 208 (255)
T ss_dssp HHHHHTCSEEEECCCCSHHHHHHHHTTCS--SCBE
T ss_pred HHHHcCCcEEEEcCCCCHHHHHHHHHhCC--CCEE
Confidence 4334678889999954 677888777774 5653
No 206
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=44.48 E-value=27 Score=36.26 Aligned_cols=63 Identities=8% Similarity=0.168 Sum_probs=40.9
Q ss_pred HHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 85 PRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 85 ~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
++++..+++|+|+|++.+|+ .++++.+++.++. ...+-+|- |-+++.+.+.. ..|+|.|.+-.
T Consensus 218 ~e~~eAl~aGaDiImLDn~s-~~~l~~av~~~~~--~v~leaSG----------GIt~~~i~~~A----~tGVD~IsvGa 280 (300)
T 3l0g_A 218 SQVEESLSNNVDMILLDNMS-ISEIKKAVDIVNG--KSVLEVSG----------CVNIRNVRNIA----LTGVDYISIGC 280 (300)
T ss_dssp HHHHHHHHTTCSEEEEESCC-HHHHHHHHHHHTT--SSEEEEES----------SCCTTTHHHHH----TTTCSEEECGG
T ss_pred HHHHHHHHcCCCEEEECCCC-HHHHHHHHHhhcC--ceEEEEEC----------CCCHHHHHHHH----HcCCCEEEeCc
Confidence 34444556899999999975 4788888887764 34444432 34444444332 26899998876
No 207
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=44.44 E-value=2e+02 Score=32.74 Aligned_cols=112 Identities=14% Similarity=0.025 Sum_probs=64.7
Q ss_pred HhCCCCEEEEecCc-------------------CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccC--------------
Q psy13907 91 IQGGIDLLAIETLP-------------------AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTC-------------- 137 (698)
Q Consensus 91 ~~~GVD~il~ETi~-------------------~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~-------------- 137 (698)
.++|+.+|+.|... .+...+.+.+++++ .+.++++++.= .|+-.
T Consensus 54 a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~-~g~~i~~Ql~h--~Gr~~~~~~~~~~~~~ps~ 130 (690)
T 3k30_A 54 AEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHE-GGGLAGIELAH--NGMNAPNQLSRETPLGPGH 130 (690)
T ss_dssp HHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHH-TTCEEEEEEEC--CGGGCCCTTTCCCCEESSS
T ss_pred hccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHh-cCCEEEEEccC--CcccccccccCCCccCCCC
Confidence 35899999999432 14456777888887 57899998862 11100
Q ss_pred ---C-----C--------CCH----HHHHHHHHhhCCCCceEEEEcCCChh-hhHHHHHHhHhhccccccccccc-ccCC
Q psy13907 138 ---H-----G--------DKF----GLIARDVYAKNPAQLVAVGVNCLAPH-YVESLLTSAEVEGQSLELPVNNT-LISR 195 (698)
Q Consensus 138 ---~-----G--------~~~----~~~~~~l~~~~~~~~~aIGiNC~~p~-~i~~~l~~~~~~~~~~~~p~~~~-~~~~ 195 (698)
. + ..+ ++.++........|.|+|=|||.+.- .+.+.|....|.-. +++| .+..
T Consensus 131 ~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~-----D~yGGs~en 205 (690)
T 3k30_A 131 LPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRT-----DEYGGSLEN 205 (690)
T ss_dssp CBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCC-----STTSSSHHH
T ss_pred CcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCc-----cccCCCHHH
Confidence 0 0 001 22222111112368999999999877 77777776644321 1121 1222
Q ss_pred ChHHHHHHHHHHHHc
Q psy13907 196 KPIQLLSIELELAAA 210 (698)
Q Consensus 196 gP~~~~~~~~~l~~~ 210 (698)
-++-++++++.+++.
T Consensus 206 R~r~~~ei~~avr~~ 220 (690)
T 3k30_A 206 RMRLLRELLEDTLDE 220 (690)
T ss_dssp HTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 345677888887775
No 208
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=44.37 E-value=9.7 Score=38.63 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=31.4
Q ss_pred HHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 83 HRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
-.++++++.++|+|.|++|-+++.++++.+.+.+ ++|+-
T Consensus 170 ai~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~----~~P~n 208 (255)
T 2qiw_A 170 AIKRIKLMEQAGARSVYPVGLSTAEQVERLVDAV----SVPVN 208 (255)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSHHHHHHHHTTC----SSCBE
T ss_pred HHHHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhC----CCCEE
Confidence 3458899999999999999999999988776543 46763
No 209
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=43.99 E-value=1.9e+02 Score=31.53 Aligned_cols=53 Identities=11% Similarity=0.090 Sum_probs=22.9
Q ss_pred CccEEeecCCCCceeecCeeeeeeeccchhhhccccchhhhhHHHHHHHHhhCce----EEEeccccc
Q psy13907 223 EAPLKAKPNRSLFETYHGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKL----YLIDGGFSS 286 (698)
Q Consensus 223 ~~~~~~~pnag~p~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~----~i~dG~~gt 286 (698)
+.|+.+|.+.|.|+.... . .|..-.++... +|.+-.+. ..+.++ +|+|=|+|.
T Consensus 315 g~~vVlMh~~G~P~tmq~-~---~y~dvv~ev~~---~l~~~i~~----a~~aGI~~~~IilDPGiGF 371 (442)
T 3mcm_A 315 NKKYVIIHNLGITDRNQY-L---DKENAIDNVCD---YIEQKKQI----LLKHGIAQQNIYFDIGFGF 371 (442)
T ss_dssp TCEEEEECC--------------------CTHHH---HHHHHHHH----HHHHTCCGGGEEEECCCC-
T ss_pred CCeEEEECCCCCCccccc-c---CcccHHHHHHH---HHHHHHHH----HHHcCCCHHHEEEeCCCCC
Confidence 788999999999987651 1 15433333332 44443333 344445 999998874
No 210
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=43.62 E-value=1.6e+02 Score=29.50 Aligned_cols=125 Identities=15% Similarity=0.097 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEE
Q psy13907 419 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 498 (698)
Q Consensus 419 ~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~i 498 (698)
+...+.++.|.++|+|+|=+ ++|+ +.=+.||..+.++.....+
T Consensus 28 ~~t~~~~~~l~~~GaD~iEl--------------------GiPf--------SDP~aDGpvIq~a~~rAL~--------- 70 (252)
T 3tha_A 28 QTSEAFLQRLDQSPIDILEL--------------------GVAY--------SDPIADGEIIADAAKIALD--------- 70 (252)
T ss_dssp HHHHHHHHTGGGSSCSEEEE--------------------ECCC--------SCCCSCCCHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHcCCCEEEE--------------------CCCC--------CCCCCCcHHHHHHHHHHHH---------
Confidence 33556788888999998832 4453 2235799988866665533
Q ss_pred EEcCCChhhhHHHHHHhcCCCCEEE--ecCC----CCCc-------CCCCcccccCCChhhHHHHHHHHHHcCCeEEeec
Q psy13907 499 GVNCLAPHYVESLLTSAGRDVPLLC--CPNS----GETF-------DPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGGC 565 (698)
Q Consensus 499 GlNC~~p~~~~~~l~~l~~~~pl~~--yPNa----G~~~-------d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiGGC 565 (698)
|++..+.+..++++++.+.|+++ |-|- |... -..+|-..+|..+++..++.+...+.|+..|==|
T Consensus 71 --~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lv 148 (252)
T 3tha_A 71 --QGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLV 148 (252)
T ss_dssp --TTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEE
T ss_pred --CCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 44567778888888875578766 7773 3110 0124433567777777777777778887777666
Q ss_pred CCCc-hHHHHHHHhcccc
Q psy13907 566 CRTN-ADDMKNVNQVPVK 582 (698)
Q Consensus 566 CGTt-P~hI~al~~~v~~ 582 (698)
--|| ++-|+.+++...+
T Consensus 149 aP~t~~eRi~~ia~~a~g 166 (252)
T 3tha_A 149 SVTTPKERVKKLVKHAKG 166 (252)
T ss_dssp ETTSCHHHHHHHHTTCCS
T ss_pred CCCCcHHHHHHHHHhCCC
Confidence 6655 5777777666543
No 211
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=43.46 E-value=27 Score=38.13 Aligned_cols=82 Identities=26% Similarity=0.217 Sum_probs=53.1
Q ss_pred HHHHHHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEE
Q psy13907 421 HRPRIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVG 499 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ET-i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iG 499 (698)
--++++++.+ |+|+|++|+ .++..|++....+++.....+++ .+.+.. + +. |..
T Consensus 273 AI~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~~P~~~l-~~~~sP-----s---fn------w~~--------- 327 (439)
T 3i4e_A 273 AISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQFPGKLL-SYNCSP-----S---FN------WKK--------- 327 (439)
T ss_dssp HHHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEE-EEECCS-----S---SC------HHH---------
T ss_pred HHHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcccCCceEE-eeCCCC-----C---Cc------Ccc---------
Confidence 3467888888 999999999 58999999999999852122222 222211 0 00 000
Q ss_pred EcCCChhhhHHHHHHhc-CCCCEEEecCCCC
Q psy13907 500 VNCLAPHYVESLLTSAG-RDVPLLCCPNSGE 529 (698)
Q Consensus 500 lNC~~p~~~~~~l~~l~-~~~pl~~yPNaG~ 529 (698)
| ..++.+..+.++|. ...-+..|||++.
T Consensus 328 -~-~~~~~~~~f~~eL~~lGv~~v~~~la~~ 356 (439)
T 3i4e_A 328 -N-LDDATIAKFQKELGAMGYKFQFITLAGF 356 (439)
T ss_dssp -H-SCHHHHHTHHHHHHHHTCCEEEETTHHH
T ss_pred -c-CCHHHHHHHHHHHHHcCCeEEEeChHHH
Confidence 0 24566777767666 5677888998863
No 212
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=43.41 E-value=74 Score=31.14 Aligned_cols=145 Identities=10% Similarity=-0.048 Sum_probs=71.2
Q ss_pred HHHHHHHHHhCCCCEEEecc----cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCce
Q psy13907 421 HRPRIEALIQGGIDLLAIET----LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLV 496 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ET----i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~ 496 (698)
..+.++.+.++|+|.|.+=- ..........+..+++..++|+++..-+.+ ..++-+.+ + .+.+
T Consensus 33 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~---------~~~~~~~~-~---~Gad 99 (252)
T 1ka9_F 33 PVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTVGGGVRS---------LEDARKLL-L---SGAD 99 (252)
T ss_dssp HHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEEESSCCS---------HHHHHHHH-H---HTCS
T ss_pred HHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEEECCcCC---------HHHHHHHH-H---cCCC
Confidence 34567777888999876521 111222223344555546899998665533 33444443 2 2356
Q ss_pred EEEEcC---CChhhhHHHHHHhcC-CCCEEEecCC--CCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEEeecC----
Q psy13907 497 AVGVNC---LAPHYVESLLTSAGR-DVPLLCCPNS--GETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGGCC---- 566 (698)
Q Consensus 497 ~iGlNC---~~p~~~~~~l~~l~~-~~pl~~yPNa--G~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiGGCC---- 566 (698)
+|.+.. ..|+.+..+++.+.. ...+++-+.. |...-...| |.. .+.....+.+++..+.|+..+.-+.
T Consensus 100 ~V~lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g-~~~-~~~~~~~e~~~~~~~~G~~~i~~~~~~~~ 177 (252)
T 1ka9_F 100 KVSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAG-GRV-PTGLHAVEWAVKGVELGAGEILLTSMDRD 177 (252)
T ss_dssp EEEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETT-TTE-EEEEEHHHHHHHHHHHTCCEEEEEETTTT
T ss_pred EEEEChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECC-Ccc-ccCCcHHHHHHHHHHcCCCEEEEecccCC
Confidence 666766 256667777766642 2233333211 210000112 411 1112334445555567876554331
Q ss_pred ----CCchHHHHHHHhcc
Q psy13907 567 ----RTNADDMKNVNQVP 580 (698)
Q Consensus 567 ----GTtP~hI~al~~~v 580 (698)
|...+.|+.+++.+
T Consensus 178 g~~~g~~~~~i~~l~~~~ 195 (252)
T 1ka9_F 178 GTKEGYDLRLTRMVAEAV 195 (252)
T ss_dssp TTCSCCCHHHHHHHHHHC
T ss_pred CCcCCCCHHHHHHHHHHc
Confidence 22356777776654
No 213
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=43.10 E-value=2.7e+02 Score=27.83 Aligned_cols=147 Identities=10% Similarity=0.076 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EecccCCHHHHHHHHHHHHhcC-CCeEEEEEEecC-CCccCCCCcHH--HH
Q psy13907 413 TPQELIDYHRPRIEALIQGGIDLL-----AIETLPAQEEAMVLAELIKEYP-GLKAWISFSCKD-EKHTCHGDKFG--LI 483 (698)
Q Consensus 413 t~del~~~y~~qi~~L~~~GvDll-----l~ETi~~~~Eakaa~~a~~~~~-~~Pv~iS~t~~~-~g~l~~G~~l~--~~ 483 (698)
+.+++. .+++.+.+.|+|++ +++...+..+....+..+++.. ++|+++++-... +|+..++..-. +.
T Consensus 30 ~~~e~~----~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~l 105 (257)
T 2yr1_A 30 DDRKVL----REAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRL 105 (257)
T ss_dssp SHHHHH----HHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHH
T ss_pred CHHHHH----HHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHH
Confidence 455543 44555666788886 4577777777787888888765 789987775444 34443454221 33
Q ss_pred HHHHHHhCCCCceEEEEcCCChhhhHHHHHHhc-CCCCEEEe-cCCCCCcCCCCcccccCCCh--hhHHHHHHHHHHcCC
Q psy13907 484 ARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAG-RDVPLLCC-PNSGETFDPGQRIWMNKDSV--PSVDTYVPRWLDTGV 559 (698)
Q Consensus 484 v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~-~~~pl~~y-PNaG~~~d~~~g~~~~~~~p--~~~a~~~~~~~~~G~ 559 (698)
++...+.. .++.|=+--..++.+..+++... ....+++. =| | ..+| +++.+...+..+.|+
T Consensus 106 l~~~~~~g--~~d~iDvEl~~~~~~~~l~~~~~~~~~kvI~S~Hd-----------f--~~tP~~~el~~~~~~~~~~ga 170 (257)
T 2yr1_A 106 IEAICRSG--AIDLVDYELAYGERIADVRRMTEECSVWLVVSRHY-----------F--DGTPRKETLLADMRQAERYGA 170 (257)
T ss_dssp HHHHHHHT--CCSEEEEEGGGTTHHHHHHHHHHHTTCEEEEEEEE-----------S--SCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcC--CCCEEEEECCCChhHHHHHHHHHhCCCEEEEEecC-----------C--CCCcCHHHHHHHHHHHHhcCC
Confidence 44333321 13444444322225556666544 33433331 11 1 2333 567777777888885
Q ss_pred ---eEEeecCCCchHHHHHHHhcc
Q psy13907 560 ---KYVGGCCRTNADDMKNVNQVP 580 (698)
Q Consensus 560 ---~iiGGCCGTtP~hI~al~~~v 580 (698)
+|+. -. .++++.-.|-+..
T Consensus 171 DivKia~-~a-~s~~D~l~ll~~~ 192 (257)
T 2yr1_A 171 DIAKVAV-MP-KSPEDVLVLLQAT 192 (257)
T ss_dssp SEEEEEE-CC-SSHHHHHHHHHHH
T ss_pred CEEEEEe-cc-CCHHHHHHHHHHH
Confidence 4443 22 3455555554433
No 214
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=43.08 E-value=42 Score=34.44 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=42.7
Q ss_pred HHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHh-cCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEc
Q psy13907 85 PRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE-YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 163 (698)
Q Consensus 85 ~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~-~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiN 163 (698)
++++..++.|+|++++.+| +.++++.+++.++. ....++.+|- |-+++.+.+... .++|.|++-
T Consensus 205 eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v~ieaSG----------GIt~~~i~~~a~----tGVD~isvG 269 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTVMLESSG----------GLSLQTAATYAE----TGVDYLAVG 269 (284)
T ss_dssp HHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEES----------SCCTTTHHHHHH----TTCSEEECG
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeEEEEEC----------CCCHHHHHHHHh----cCCCEEEEC
Confidence 3555556689999999996 56788888888876 2345666553 333333333222 578888865
Q ss_pred C
Q psy13907 164 C 164 (698)
Q Consensus 164 C 164 (698)
.
T Consensus 270 ~ 270 (284)
T 1qpo_A 270 A 270 (284)
T ss_dssp G
T ss_pred H
Confidence 5
No 215
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=43.04 E-value=1.3e+02 Score=33.01 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=17.5
Q ss_pred ChHHHHHHHHHHHHHhcchhhccccc
Q psy13907 313 NRQAVIDTHRDYVRAGCDIVTTNTYQ 338 (698)
Q Consensus 313 ~Pe~V~~iH~~yl~AGAdII~TNTf~ 338 (698)
+++....+ +..+++|+|+|.-|+-+
T Consensus 253 ~~~~~~~a-~~~~~aG~d~v~i~~~~ 277 (514)
T 1jcn_A 253 REDDKYRL-DLLTQAGVDVIVLDSSQ 277 (514)
T ss_dssp STTHHHHH-HHHHHTTCSEEEECCSC
T ss_pred chhhHHHH-HHHHHcCCCEEEeeccC
Confidence 34544444 55889999999987753
No 216
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=42.92 E-value=29 Score=35.76 Aligned_cols=61 Identities=10% Similarity=0.109 Sum_probs=39.8
Q ss_pred HHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEc
Q psy13907 86 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 163 (698)
Q Consensus 86 qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiN 163 (698)
+++..+++|+|+|.+.+|+ .++++.+++.++. ..++.+|- |-+++.+.+.. ..++|.|++-
T Consensus 210 ea~eAl~aGaD~I~LDn~~-~~~l~~av~~~~~--~v~ieaSG----------GIt~~~i~~~a----~tGVD~IsvG 270 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNFS-GEDIDIAVSIARG--KVALEVSG----------NIDRNSIVAIA----KTGVDFISVG 270 (287)
T ss_dssp HHHHHHHTTCSEEEEESCC-HHHHHHHHHHHTT--TCEEEEES----------SCCTTTHHHHH----TTTCSEEECS
T ss_pred HHHHHHHcCCCEEEEcCCC-HHHHHHHHHhhcC--CceEEEEC----------CCCHHHHHHHH----HcCCCEEEEC
Confidence 4444456899999999965 5788888887763 45666553 33444443322 2688988874
No 217
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=42.87 E-value=2.1e+02 Score=29.61 Aligned_cols=142 Identities=9% Similarity=0.081 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCEE-Eeccc---CCHHH--------HHHHHHHHHhcC-CCeEEEEEEecCCCccCCCCcHH
Q psy13907 415 QELIDYHRPRIEALIQGGIDLL-AIETL---PAQEE--------AMVLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFG 481 (698)
Q Consensus 415 del~~~y~~qi~~L~~~GvDll-l~ETi---~~~~E--------akaa~~a~~~~~-~~Pv~iS~t~~~~g~l~~G~~l~ 481 (698)
+.+.+.+.+-++.++++|+|.+ ++++. -+... .+.++..+++.. +.|++ -| |.+.. .
T Consensus 189 ~~l~~~~~~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~i-h~-c~g~~-----~--- 258 (353)
T 1j93_A 189 QKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLI-LY-ASGSG-----G--- 258 (353)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEE-EE-CSSCT-----T---
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEE-EE-CCChH-----H---
Confidence 4455566677788889999976 45654 23332 233455555432 57763 44 43321 1
Q ss_pred HHHHHHHHhCCCCceEEEEcC-CChhhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHc-C-
Q psy13907 482 LIARDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDT-G- 558 (698)
Q Consensus 482 ~~v~~~~~~~~~~~~~iGlNC-~~p~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~-G- 558 (698)
.++.+.+ .+.+++++.- .. +..+.+.++. -+.+.-|- |+ . .. ..++++..+.+++.++. |
T Consensus 259 -~l~~l~~---~g~d~~~~d~~~d---~~~~~~~~g~--~~~l~Gnl----dp--~-~l-~~~~e~i~~~v~~~l~~~~~ 321 (353)
T 1j93_A 259 -LLERLPL---TGVDVVSLDWTVD---MADGRRRLGP--NVAIQGNV----DP--G-VL-FGSKEFITNRINDTVKKAGK 321 (353)
T ss_dssp -TGGGGGG---GCCSEEECCTTSC---HHHHHHHTCS--SSEEECCB----CG--G-GG-GSCHHHHHHHHHHHHHHHCS
T ss_pred -HHHHHHh---cCCCEEEeCCCCC---HHHHHHHcCC--CeEEEecC----CH--H-HH-cCCHHHHHHHHHHHHHHhCC
Confidence 2223322 4567777765 34 3344344442 23344443 11 1 11 35788999999888764 4
Q ss_pred -CeEEeecCC----CchHHHHHHHhccccC
Q psy13907 559 -VKYVGGCCR----TNADDMKNVNQVPVKF 583 (698)
Q Consensus 559 -~~iiGGCCG----TtP~hI~al~~~v~~~ 583 (698)
--|++=-|| |.|++++++.++++++
T Consensus 322 ~g~I~~~g~gi~~~~~~enl~a~ve~v~~~ 351 (353)
T 1j93_A 322 GKHILNLGHGIKVGTPEENFAHFFEIAKGL 351 (353)
T ss_dssp SSEEBCBSSCCCTTCCHHHHHHHHHHHHTC
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 357776776 6789999999998764
No 218
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=42.69 E-value=33 Score=35.17 Aligned_cols=56 Identities=14% Similarity=0.216 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCC
Q psy13907 76 PQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDK 141 (698)
Q Consensus 76 ~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~ 141 (698)
.+.+ +.-.++++++.++|+|.|.+|-+|+. +++.+.+. .++|++ .+ -.|.-.||+-
T Consensus 169 ~~~a-~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~----l~iP~i-gI---GaG~~cdgQv 224 (275)
T 3vav_A 169 EAGA-AQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTRE----LSIPTI-GI---GAGAECSGQV 224 (275)
T ss_dssp HHHH-HHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHH----CSSCEE-EE---SSCSCSSEEE
T ss_pred HHHH-HHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHh----CCCCEE-EE---ccCCCCCcee
Confidence 3444 55566899999999999999999986 66666544 357875 33 2355557764
No 219
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=42.48 E-value=2.2e+02 Score=32.20 Aligned_cols=136 Identities=10% Similarity=0.071 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEecccCC------------------HHHHHHHHHHHHhcCCCeEEEEEEecCCCccC
Q psy13907 414 PQELIDYHRPRIEALIQGGIDLLAIETLPA------------------QEEAMVLAELIKEYPGLKAWISFSCKDEKHTC 475 (698)
Q Consensus 414 ~del~~~y~~qi~~L~~~GvDlll~ETi~~------------------~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~ 475 (698)
.+.+.++|.+++ ++|+.+++.|.+.- ....+...+++++. +-++++.+. ..||..
T Consensus 36 ~~~~~~~y~~ra----~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~-g~~i~~Ql~--h~Gr~~ 108 (671)
T 1ps9_A 36 AERLAAFYAERA----RHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQE-GGKIALQIL--HTGRYS 108 (671)
T ss_dssp HHHHHHHHHHHH----HTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHT-TCCEEEEEC--CCGGGS
T ss_pred cHHHHHHHHHHh----cCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhc-CCEEEEEec--cCCccc
Confidence 578888888876 48999999996431 22456666777764 567777764 222211
Q ss_pred -----------------------CCCcHHHHHHHHHH----hCCCCceEEEEcCCC---------hh-------------
Q psy13907 476 -----------------------HGDKFGLIARDVYA----KNPAQLVAVGVNCLA---------PH------------- 506 (698)
Q Consensus 476 -----------------------~G~~l~~~v~~~~~----~~~~~~~~iGlNC~~---------p~------------- 506 (698)
+-+.+.+.++.+.+ ...++.++|-+||.+ |.
T Consensus 109 ~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~ 188 (671)
T 1ps9_A 109 YQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYR 188 (671)
T ss_dssp BSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHH
T ss_pred CCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHH
Confidence 11112233333321 112678899999853 21
Q ss_pred ----hhHHHHHHhc----CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEEe
Q psy13907 507 ----YVESLLTSAG----RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVG 563 (698)
Q Consensus 507 ----~~~~~l~~l~----~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiG 563 (698)
.+...++.++ .++|+++.-+.. +...+.| +.++..+.++.+.+.|+.++.
T Consensus 189 ~r~r~~~eiv~avr~~vG~~~~v~vrls~~---~~~~~g~----~~~~~~~~a~~l~~~g~d~i~ 246 (671)
T 1ps9_A 189 NRMRFAVEVVRAVRERVGNDFIIIYRLSML---DLVEDGG----TFAETVELAQAIEAAGATIIN 246 (671)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSEEEEEEEEE---CCSTTCC----CHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEECcc---ccCCCCC----CHHHHHHHHHHHHhcCCCEEE
Confidence 1233333333 578887755442 1112223 456677777777778866663
No 220
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=42.20 E-value=81 Score=33.49 Aligned_cols=45 Identities=24% Similarity=0.435 Sum_probs=31.6
Q ss_pred HHHHHHHHHhCCCCEEEecccC-CHHHHHHHHHHHHh-cCCCeEEEE
Q psy13907 421 HRPRIEALIQGGIDLLAIETLP-AQEEAMVLAELIKE-YPGLKAWIS 465 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi~-~~~Eakaa~~a~~~-~~~~Pv~iS 465 (698)
+.++++.++++|+|+|.+.|.. +..+....++.+++ +++.|+++.
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G 155 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGG 155 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEee
Confidence 4578999999999999987643 33455555666664 447888763
No 221
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=42.18 E-value=1.2e+02 Score=31.58 Aligned_cols=224 Identities=16% Similarity=0.128 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEE--ecC
Q psy13907 315 QAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAG--SLG 392 (698)
Q Consensus 315 e~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAG--siG 392 (698)
|.+.+.-++-++.|-.-|.- |.......++..|-....-..+...|++..|+... ..+|.. ++-
T Consensus 59 d~l~~~~~~~~~~Gi~~v~L--Fgvp~~~~Kd~~gs~A~~~~g~v~~air~iK~~~p------------dl~vitDvcLc 124 (330)
T 1pv8_A 59 KRLEEMLRPLVEEGLRCVLI--FGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFP------------NLLVACDVCLC 124 (330)
T ss_dssp HHHHHHHHHHHHHTCCEEEE--EECC--------------CCSHHHHHHHHHHHHST------------TSEEEEEECCC
T ss_pred HHHHHHHHHHHHCCCCEEEE--ecCCcccCCCccccccCCCCChHHHHHHHHHHHCC------------CeEEEEeeecc
Confidence 44555566777888765443 33211111222222111112367777777666532 234443 567
Q ss_pred CcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHh--cCC-CeEEEEEEec
Q psy13907 393 SYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE--YPG-LKAWISFSCK 469 (698)
Q Consensus 393 P~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~--~~~-~Pv~iS~t~~ 469 (698)
||...=+.|.-.. .+.+.-|+-.+.+.+|+-...++|+|++.-=-|-|- ...++..++.+ +.+ .|+| |.+.+
T Consensus 125 ~YT~HGHcGil~~---~g~v~ND~Tl~~La~~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~~v~Im-sYsaK 199 (330)
T 1pv8_A 125 PYTSHGHCGLLSE---NGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDG-RVEAIKEALMAHGLGNRVSVM-SYSAK 199 (330)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHTCSEEEECC--CC-HHHHHHHHHHHTTCTTTCEEB-CCCEE
T ss_pred cccCCCceeEECC---CCcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHhCCCcCCceEe-ehhHH
Confidence 7764334443210 123778999999999999999999999998777776 45677777775 344 5654 55432
Q ss_pred C-------------------CCc--cCCCCcHHHHHHHHHHhCCCCceEEEEcCCChhhhHHHHHHhc--C-CCCEEEec
Q psy13907 470 D-------------------EKH--TCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAG--R-DVPLLCCP 525 (698)
Q Consensus 470 ~-------------------~g~--l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~--~-~~pl~~yP 525 (698)
- +.+ -++-..-.+++..+......+.+.|.|-=..| .+.+++.++ . +.|+.+|=
T Consensus 200 yASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~--YLDIi~~vk~~~p~~P~aaYq 277 (330)
T 1pv8_A 200 FASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMP--YLDIVREVKDKHPDLPLAVYH 277 (330)
T ss_dssp CCCGGGHHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBEEEESCGG--GHHHHHHHHHHSTTSCEEEEE
T ss_pred HhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCcc--HHHHHHHHHHhcCCCCeEEEE
Confidence 1 011 12222233444444322234556677765444 345555554 4 89999999
Q ss_pred CCCCCc----CCCCcccccCCChhhHHHHHHHHHHcCCeEE
Q psy13907 526 NSGETF----DPGQRIWMNKDSVPSVDTYVPRWLDTGVKYV 562 (698)
Q Consensus 526 NaG~~~----d~~~g~~~~~~~p~~~a~~~~~~~~~G~~ii 562 (698)
-+|+-- -...| |. + ....+.+.+..+.++|+.+|
T Consensus 278 VSGEYAMikaAa~~G-wi-D-~~~~v~Esl~~~kRAGAd~I 315 (330)
T 1pv8_A 278 VSGEFAMLWHGAQAG-AF-D-LKAAVLEAMTAFRRAGADII 315 (330)
T ss_dssp CHHHHHHHHHHHHTT-SS-C-HHHHHHHHHHHHHHHTCSEE
T ss_pred cCcHHHHHHHHHHcC-Cc-c-HHHHHHHHHHHHHhcCCCEE
Confidence 988511 11234 72 1 12346777777888998876
No 222
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=42.07 E-value=1.9e+02 Score=29.65 Aligned_cols=45 Identities=13% Similarity=0.128 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEecC----cCHHHHHHHHHHHHhcCCCe-EE
Q psy13907 81 DYHRPRIEALIQGGIDLLAIETL----PAQEEAMVLAELIKEYPGLK-AW 125 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~ETi----~~l~Ea~aa~~a~~~~~~~P-v~ 125 (698)
+...+.++.+.+.|+|+|-++.- .+.++++.+++....++.+| |+
T Consensus 177 ~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv 226 (304)
T 1to3_A 177 QAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVI 226 (304)
T ss_dssp HHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEE
Confidence 44455678888899999999974 57888888888766656789 44
No 223
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=42.05 E-value=1.9e+02 Score=35.55 Aligned_cols=133 Identities=16% Similarity=0.157 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCEE-EecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCC--CcHHHHHHHHHHhCCCCceEE
Q psy13907 422 RPRIEALIQGGIDLL-AIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHG--DKFGLIARDVYAKNPAQLVAV 498 (698)
Q Consensus 422 ~~qi~~L~~~GvDll-l~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G--~~l~~~v~~~~~~~~~~~~~i 498 (698)
.+-++...++|+|.+ +|=...++.+++..++.+++ .+..+-..+++..+-.-... .++...++.+......++..|
T Consensus 648 ~~~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~-~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i 726 (1165)
T 2qf7_A 648 KYFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAE-ENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHII 726 (1165)
T ss_dssp HHHHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHH-TTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHh-ccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEE
Q ss_pred EEc----CCChhhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEE-------eec
Q psy13907 499 GVN----CLAPHYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYV-------GGC 565 (698)
Q Consensus 499 GlN----C~~p~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~ii-------GGC 565 (698)
.+- ...|..+..+++.+. .+.||.++... ..| .-..-.-..+++|+++| |||
T Consensus 727 ~l~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hn------d~G---------lAvAn~laAv~aGa~~vd~ti~GlGe~ 791 (1165)
T 2qf7_A 727 AVKDMAGLLKPAAAKVLFKALREATGLPIHFHTHD------TSG---------IAAATVLAAVEAGVDAVDAAMDALSGN 791 (1165)
T ss_dssp EEEETTCCCCHHHHHHHHHHHHHHCSSCEEEEECB------TTS---------CHHHHHHHHHHTTCSEEEEBCGGGCSB
T ss_pred EEeCccCCcCHHHHHHHHHHHHHhcCCeEEEEECC------CCC---------HHHHHHHHHHHhCCCEEEecccccCCC
Q ss_pred CCCch
Q psy13907 566 CRTNA 570 (698)
Q Consensus 566 CGTtP 570 (698)
||-.+
T Consensus 792 ~Gn~~ 796 (1165)
T 2qf7_A 792 TSQPC 796 (1165)
T ss_dssp TSCCB
T ss_pred ccchh
No 224
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=41.30 E-value=16 Score=38.22 Aligned_cols=138 Identities=16% Similarity=0.102 Sum_probs=77.0
Q ss_pred ChHHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecC
Q psy13907 313 NRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLG 392 (698)
Q Consensus 313 ~Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiG 392 (698)
+++-|+...+.-..+|.+.|.+. ..+|.......++++.+++.+....+++.||+. +. .|.. |
T Consensus 79 ~~~~i~~a~~al~~ag~~~v~i~-~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~------------g~--~v~f--~ 141 (325)
T 3eeg_A 79 KEADINIAGEALRFAKRSRIHTG-IGSSDIHIEHKLRSTRENILEMAVAAVKQAKKV------------VH--EVEF--F 141 (325)
T ss_dssp CHHHHHHHHHHHTTCSSEEEEEE-EECSHHHHC----CCCTTGGGTTHHHHHHHHTT------------SS--EEEE--E
T ss_pred CHHHHHHHHHhhcccCCCEEEEE-ecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHC------------CC--EEEE--E
Confidence 34444444333334488877643 233444333334566666656666666665543 11 2321 2
Q ss_pred CcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec-cc--CCHHHHHHHHHHHHhc-CCCe-EEEEEE
Q psy13907 393 SYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE-TL--PAQEEAMVLAELIKEY-PGLK-AWISFS 467 (698)
Q Consensus 393 P~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~E-Ti--~~~~Eakaa~~a~~~~-~~~P-v~iS~t 467 (698)
+ ||.+. .+. +++.+.++.+.+.|+|.|.+= |+ ....++...+.++++. ++.+ +.|++-
T Consensus 142 ~---------~d~~~----~~~----~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H 204 (325)
T 3eeg_A 142 C---------EDAGR----ADQ----AFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAH 204 (325)
T ss_dssp E---------ETGGG----SCH----HHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEEC
T ss_pred c---------ccccc----chH----HHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEE
Confidence 1 12221 233 567777888888999998654 33 4567888888888863 2211 567887
Q ss_pred ecCCCccCCCCcHHHHHHHHH
Q psy13907 468 CKDEKHTCHGDKFGLIARDVY 488 (698)
Q Consensus 468 ~~~~g~l~~G~~l~~~v~~~~ 488 (698)
+.+ -.|..+..++.++.
T Consensus 205 ~Hn----d~GlA~AN~laA~~ 221 (325)
T 3eeg_A 205 CHN----DLGLATANSLAALQ 221 (325)
T ss_dssp BCC----TTSCHHHHHHHHHH
T ss_pred eCC----CCCHHHHHHHHHHH
Confidence 777 56777777777764
No 225
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=41.25 E-value=40 Score=33.61 Aligned_cols=27 Identities=33% Similarity=0.423 Sum_probs=23.4
Q ss_pred cChHHHHHHHHHHHHHhcchhhccc-cc
Q psy13907 312 SNRQAVIDTHRDYVRAGCDIVTTNT-YQ 338 (698)
Q Consensus 312 ~~Pe~V~~iH~~yl~AGAdII~TNT-f~ 338 (698)
..++.|...-+--.+||||.|-|.| |.
T Consensus 143 ~t~eei~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 143 SGEPLLADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEECCCSCC
T ss_pred CCHHHHHHHHHHHHHHCcCEEEcCCCCC
Confidence 4678888888889999999999999 75
No 226
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=40.89 E-value=78 Score=32.22 Aligned_cols=65 Identities=18% Similarity=0.135 Sum_probs=47.3
Q ss_pred HHHHHHhCCCCEEEEec-CcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 86 RIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 86 qi~~l~~~GVD~il~ET-i~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
|+......|+|.+++=+ .-+..+++..++.++++ ++-+++... +.+++-..+ ..+++.||+|=
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~l-Gl~~lvevh-----------~~eEl~~A~----~~ga~iIGinn 197 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFAL-GMDALIEVH-----------DEAEMERAL----KLSSRLLGVNN 197 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHT-TCEEEEEEC-----------SHHHHHHHT----TSCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHc-CCeEEEEeC-----------CHHHHHHHH----hcCCCEEEECC
Confidence 56667789999988874 55667888999999984 777776662 456654433 36899999995
Q ss_pred CC
Q psy13907 165 LA 166 (698)
Q Consensus 165 ~~ 166 (698)
..
T Consensus 198 r~ 199 (272)
T 3tsm_A 198 RN 199 (272)
T ss_dssp BC
T ss_pred CC
Confidence 43
No 227
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=40.76 E-value=1.1e+02 Score=33.81 Aligned_cols=58 Identities=24% Similarity=0.438 Sum_probs=40.3
Q ss_pred CCcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccC-CHHHHHHHHHHHHh-cCCC
Q psy13907 383 RHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLP-AQEEAMVLAELIKE-YPGL 460 (698)
Q Consensus 383 ~~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~-~~~Eakaa~~a~~~-~~~~ 460 (698)
.+..|..++|.... +.++++.|+++|+|++.+-+-. +.......+..+++ ++++
T Consensus 218 grL~v~aavG~~~d------------------------~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~ 273 (496)
T 4fxs_A 218 GRLRVGAAVGAAPG------------------------NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHL 273 (496)
T ss_dssp SCBCCEEECCSSSC------------------------CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTC
T ss_pred cceeeeeeeccccc------------------------hHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCc
Confidence 45778888887421 2477899999999999987543 33444556666664 4478
Q ss_pred eEEE
Q psy13907 461 KAWI 464 (698)
Q Consensus 461 Pv~i 464 (698)
|+++
T Consensus 274 ~Vi~ 277 (496)
T 4fxs_A 274 EIIG 277 (496)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 9887
No 228
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=40.57 E-value=1.3e+02 Score=29.83 Aligned_cols=100 Identities=11% Similarity=0.068 Sum_probs=58.2
Q ss_pred HHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEc
Q psy13907 422 RPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 501 (698)
Q Consensus 422 ~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlN 501 (698)
.+|++..+++|+|++.. |.+. ...+++++++ ++|++... .|.+++..++. .+.+.|.+=
T Consensus 96 ~~~a~~Ai~AGA~fIvs---P~~~--~~vi~~~~~~-gi~~ipGv-----------~TptEi~~A~~----~Gad~vK~F 154 (232)
T 4e38_A 96 GEQALAAKEAGATFVVS---PGFN--PNTVRACQEI-GIDIVPGV-----------NNPSTVEAALE----MGLTTLKFF 154 (232)
T ss_dssp HHHHHHHHHHTCSEEEC---SSCC--HHHHHHHHHH-TCEEECEE-----------CSHHHHHHHHH----TTCCEEEEC
T ss_pred HHHHHHHHHcCCCEEEe---CCCC--HHHHHHHHHc-CCCEEcCC-----------CCHHHHHHHHH----cCCCEEEEC
Confidence 37788889999999985 3321 3345556653 78887432 26778777763 456667663
Q ss_pred CCChhhh--HHHHHHhcCCCC-EEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeE
Q psy13907 502 CLAPHYV--ESLLTSAGRDVP-LLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKY 561 (698)
Q Consensus 502 C~~p~~~--~~~l~~l~~~~p-l~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~i 561 (698)
= .+.+ ..+|+.+....| +-+.|-.|. +++ -+.+|++.|+..
T Consensus 155 P--a~~~gG~~~lkal~~p~p~ip~~ptGGI-------------~~~----n~~~~l~aGa~~ 198 (232)
T 4e38_A 155 P--AEASGGISMVKSLVGPYGDIRLMPTGGI-------------TPS----NIDNYLAIPQVL 198 (232)
T ss_dssp S--TTTTTHHHHHHHHHTTCTTCEEEEBSSC-------------CTT----THHHHHTSTTBC
T ss_pred c--CccccCHHHHHHHHHHhcCCCeeeEcCC-------------CHH----HHHHHHHCCCeE
Confidence 2 2222 366777763222 333454442 222 247799999543
No 229
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=40.30 E-value=27 Score=38.09 Aligned_cols=35 Identities=29% Similarity=0.252 Sum_probs=31.0
Q ss_pred HHHHHHHHHhCCCCEEEeccc-CCHHHHHHHHHHHHh
Q psy13907 421 HRPRIEALIQGGIDLLAIETL-PAQEEAMVLAELIKE 456 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi-~~~~Eakaa~~a~~~ 456 (698)
--++++++.+ |+|+|++|+. ++..|++...++++.
T Consensus 268 AI~Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~ 303 (433)
T 3eol_A 268 CIARAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHK 303 (433)
T ss_dssp HHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcc
Confidence 3477888898 9999999996 899999999999985
No 230
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=40.03 E-value=1.8e+02 Score=30.32 Aligned_cols=152 Identities=9% Similarity=0.042 Sum_probs=81.8
Q ss_pred CCCCH---HHHHHHHHHHHHHHHhCCCCEEEeccc----------C-----------CHHH----HHHHHHHHHhcC--C
Q psy13907 410 DSTTP---QELIDYHRPRIEALIQGGIDLLAIETL----------P-----------AQEE----AMVLAELIKEYP--G 459 (698)
Q Consensus 410 ~~~t~---del~~~y~~qi~~L~~~GvDlll~ETi----------~-----------~~~E----akaa~~a~~~~~--~ 459 (698)
+.+|. +++.+.|.+.++...++|.|.+=+=-- | ++++ +..+++++++.. +
T Consensus 140 ~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d 219 (349)
T 3hgj_A 140 EPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRE 219 (349)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTT
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 45665 556778888889899999998743221 1 1221 345666777543 5
Q ss_pred CeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcCC----------ChhhhHHHHHHhc--CCCCEEEecCC
Q psy13907 460 LKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCL----------APHYVESLLTSAG--RDVPLLCCPNS 527 (698)
Q Consensus 460 ~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~----------~p~~~~~~l~~l~--~~~pl~~yPNa 527 (698)
.||.|-++..+ ....|.++.++++.+......+++.|-+-+. ++..-.++++.+. .+.||++ |.
T Consensus 220 ~pV~vRls~~~--~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~--~G 295 (349)
T 3hgj_A 220 LPLFVRVSATD--WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGA--VG 295 (349)
T ss_dssp SCEEEEEESCC--CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEE--CS
T ss_pred ceEEEEecccc--ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEE--EC
Confidence 78888887644 2345777776555443222245666655431 1222233444443 3455543 22
Q ss_pred CCCcCCCCcccccCCChhhHHHHHHHHHHcC-CeEEeecCC--CchHHHHHHHhccc
Q psy13907 528 GETFDPGQRIWMNKDSVPSVDTYVPRWLDTG-VKYVGGCCR--TNADDMKNVNQVPV 581 (698)
Q Consensus 528 G~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G-~~iiGGCCG--TtP~hI~al~~~v~ 581 (698)
| + .+++ .+.+.++.| +.+|+=+-. ..|+-.+.+++.+.
T Consensus 296 g---------i---~t~e----~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~ 336 (349)
T 3hgj_A 296 L---------I---TTPE----QAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALG 336 (349)
T ss_dssp S---------C---CCHH----HHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTT
T ss_pred C---------C---CCHH----HHHHHHHCCCceEEEecHHHHhCchHHHHHHHHCC
Confidence 1 1 1222 234556666 666664333 35666666666654
No 231
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=39.95 E-value=1.1e+02 Score=31.90 Aligned_cols=43 Identities=9% Similarity=-0.020 Sum_probs=27.0
Q ss_pred ChhhhHHHHHHhHhhc-ccccccccccccCCChHHHHHHHHHHHHc
Q psy13907 166 APHYVESLLTSAEVEG-QSLELPVNNTLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 166 ~p~~i~~~l~~~~~~~-~~~~~p~~~~~~~~gP~~~~~~~~~l~~~ 210 (698)
.|+.+..+.+.+...+ ..+.+++-.|... |.++.++++.+++.
T Consensus 147 ~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~--P~~v~~lv~~l~~~ 190 (345)
T 1nvm_A 147 PAEKLAEQGKLMESYGATCIYMADSGGAMS--MNDIRDRMRAFKAV 190 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTCCCC--HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCccC--HHHHHHHHHHHHHh
Confidence 3445555555554442 2244556666654 99999999999876
No 232
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=39.95 E-value=2.9e+02 Score=32.23 Aligned_cols=134 Identities=12% Similarity=0.169 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEe-ccc----CCHHHHHHHHHHHHhc----CCCeEEEEEEecCCCccCCCCcHH-HH
Q psy13907 414 PQELIDYHRPRIEALIQGGIDLLAI-ETL----PAQEEAMVLAELIKEY----PGLKAWISFSCKDEKHTCHGDKFG-LI 483 (698)
Q Consensus 414 ~del~~~y~~qi~~L~~~GvDlll~-ETi----~~~~Eakaa~~a~~~~----~~~Pv~iS~t~~~~g~l~~G~~l~-~~ 483 (698)
.+.+.+.|.+.++.|.+.|++.+-+ |.. .+.....+...+++.. .+.++++... -|. +. +.
T Consensus 181 l~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc--------~G~-~~~~~ 251 (765)
T 1u1j_A 181 LPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETY--------FAD-IPAEA 251 (765)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTCSSEEEEECC--------SSC-CCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeC--------CCC-cchHH
Confidence 5899999999999999999998743 422 2223334444555554 2455543332 121 22 44
Q ss_pred HHHHHHhCCCC-ceEEEEcC-CChhhhHHHHHHhcCCCC--EEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHc-C
Q psy13907 484 ARDVYAKNPAQ-LVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDT-G 558 (698)
Q Consensus 484 v~~~~~~~~~~-~~~iGlNC-~~p~~~~~~l~~l~~~~p--l~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~-G 558 (698)
...+. ..+ +++|++-+ .+++.+..+.+.+..+.- +++-+ | . -.| .++++...+.+++..+. |
T Consensus 252 ~~~l~---~l~~vd~l~lD~v~~~~~l~~l~~~l~~~k~L~lGvVd--g-----r-ni~--~~d~e~v~~~l~~~~~~lg 318 (765)
T 1u1j_A 252 YKTLT---SLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVD--G-----R-NIW--ANDFAASLSTLQALEGIVG 318 (765)
T ss_dssp HHHHT---TCTTCCEEEEESSSCTTHHHHHHHCCCSSCEEEEEEEC--S-----S-SCB--CCCHHHHHHHHHHHHHHCC
T ss_pred HHHHH---cCCCCcEEEEEecCCcccHHHHHHhcCCCCEEEEEeeC--C-----c-ccC--CCCHHHHHHHHHHHHHhcC
Confidence 55553 356 89999999 455555555443443322 33332 1 1 125 67888888888877654 7
Q ss_pred Ce--EEeecCCCc
Q psy13907 559 VK--YVGGCCRTN 569 (698)
Q Consensus 559 ~~--iiGGCCGTt 569 (698)
.. +++=-||.-
T Consensus 319 ~~~l~lspsCgL~ 331 (765)
T 1u1j_A 319 KDKLVVSTSCSLL 331 (765)
T ss_dssp SSCEEEEESSCGG
T ss_pred CCcEEEcCCCCcc
Confidence 44 789999876
No 233
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=39.85 E-value=43 Score=34.19 Aligned_cols=50 Identities=14% Similarity=0.202 Sum_probs=35.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
.-+.+++.++-.+.++.|.+.|+|+|++=+-.. =..+++.+++..++|++
T Consensus 65 ~ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa---~~~al~~lr~~~~iPvi 114 (274)
T 3uhf_A 65 VKDKDTIIKFCLEALDFFEQFQIDMLIIACNTA---SAYALDALRAKAHFPVY 114 (274)
T ss_dssp TSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHH---HHHSHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCh---hHHHHHHHHHhcCCCEE
Confidence 357899999999999999999999999643221 11235566654578876
No 234
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=39.55 E-value=44 Score=34.02 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=39.6
Q ss_pred HHHHHhCCCCEEEEecCcCHHHHHHHHHHHHh-cCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEc
Q psy13907 87 IEALIQGGIDLLAIETLPAQEEAMVLAELIKE-YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 163 (698)
Q Consensus 87 i~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~-~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiN 163 (698)
++...+.|+|+|.+-|+ ++++++.+++.++. +++.|+.+|- |-+.+.+.+.+ ..|+|.||+-
T Consensus 195 ~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~i~AsG----------GI~~~ni~~~~----~aGaD~i~vG 257 (273)
T 2b7n_A 195 AKNAMNAGADIVMCDNL-SVLETKEIAAYRDAHYPFVLLEASG----------NISLESINAYA----KSGVDAISVG 257 (273)
T ss_dssp HHHHHHHTCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEES----------SCCTTTHHHHH----TTTCSEEECT
T ss_pred HHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCcEEEEEC----------CCCHHHHHHHH----HcCCcEEEEc
Confidence 33334579999999996 57888888887764 3457777664 23333333322 2578888873
No 235
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=39.47 E-value=1.7e+02 Score=28.47 Aligned_cols=144 Identities=14% Similarity=0.072 Sum_probs=72.3
Q ss_pred HHHHHHHHhCCCCEEEecccC----CHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceE
Q psy13907 422 RPRIEALIQGGIDLLAIETLP----AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVA 497 (698)
Q Consensus 422 ~~qi~~L~~~GvDlll~ETi~----~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~ 497 (698)
.+.++.+.++|+|.|-+=... ........+..+++..++|+++..-+.+ ..++-+.+ + .+.+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~---------~~~~~~~~-~---~Gad~ 99 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHD---------FETASELI-L---RGADK 99 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCCS---------HHHHHHHH-H---TTCSE
T ss_pred HHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEeCCCCC---------HHHHHHHH-H---cCCCE
Confidence 345677788999987543322 1222223344455556799988655432 44533333 3 34566
Q ss_pred EEEcC---CChhhhHHHHHHhcC-CCCEEEecC--CCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEEee-------
Q psy13907 498 VGVNC---LAPHYVESLLTSAGR-DVPLLCCPN--SGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGG------- 564 (698)
Q Consensus 498 iGlNC---~~p~~~~~~l~~l~~-~~pl~~yPN--aG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiGG------- 564 (698)
|.+.. ..|+.+..+++.+.. ..-+++-+. .|... .....|. ..+.....+.+++..+.|+..|.-
T Consensus 100 V~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~-v~~~g~~-~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g 177 (253)
T 1thf_D 100 VSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFM-VFTYSGK-KNTGILLRDWVVEVEKRGAGEILLTSIDRDG 177 (253)
T ss_dssp EEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEE-EEETTTT-EEEEEEHHHHHHHHHHTTCSEEEEEETTTTT
T ss_pred EEEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEE-EEECCCc-cccCCCHHHHHHHHHHCCCCEEEEEeccCCC
Confidence 66665 256667777776652 222444442 22100 0111241 111123445556666778654332
Q ss_pred -cCCCchHHHHHHHhcc
Q psy13907 565 -CCRTNADDMKNVNQVP 580 (698)
Q Consensus 565 -CCGTtP~hI~al~~~v 580 (698)
--|...+.++.+++.+
T Consensus 178 ~~~g~~~~~~~~l~~~~ 194 (253)
T 1thf_D 178 TKSGYDTEMIRFVRPLT 194 (253)
T ss_dssp SCSCCCHHHHHHHGGGC
T ss_pred CCCCCCHHHHHHHHHhc
Confidence 1234466777776533
No 236
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=39.44 E-value=1.1e+02 Score=29.03 Aligned_cols=65 Identities=15% Similarity=0.105 Sum_probs=44.4
Q ss_pred HHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEc
Q psy13907 87 IEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 163 (698)
Q Consensus 87 i~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiN 163 (698)
++.+.+.|+|.+++=..+..+.++.++++++++ ++++++.+. .-.++.+.+..+.. .+++.|++|
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~-g~~~~v~~~--------~~~t~~~~~~~~~~---~g~d~i~v~ 134 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEA-GKQVVVDMI--------CVDDLPARVRLLEE---AGADMLAVH 134 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHH-TCEEEEECT--------TCSSHHHHHHHHHH---HTCCEEEEE
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHc-CCeEEEEec--------CCCCHHHHHHHHHH---cCCCEEEEc
Confidence 777788999999998877666678888888884 777776431 11234344444432 467888876
No 237
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=39.21 E-value=1.7e+02 Score=30.02 Aligned_cols=81 Identities=14% Similarity=0.098 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCC------CccCCCCC--HHHHHHHHHhhC
Q psy13907 82 YHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDE------KHTCHGDK--FGLIARDVYAKN 153 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~------g~l~~G~~--~~~~~~~l~~~~ 153 (698)
.++.-.+.+.++|++.+-+|--. |...-++++.+ .++||+..+=+.+. |...-|.+ .+++++......
T Consensus 114 a~~na~rl~~eaGa~aVklEdg~---e~~~~I~al~~-agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~ 189 (281)
T 1oy0_A 114 ALAAATRFLKDGGAHAVKLEGGE---RVAEQIACLTA-AGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVA 189 (281)
T ss_dssp HHHHHHHHHHTTCCSEEEEEBSG---GGHHHHHHHHH-HTCCEEEEEECCC--------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCeEEEECCcH---HHHHHHHHHHH-CCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHH
Confidence 34444555566999999999753 44455556665 57999865544332 22222332 345555443333
Q ss_pred CCCceEEEEcCCC
Q psy13907 154 PAQLVAVGVNCLA 166 (698)
Q Consensus 154 ~~~~~aIGiNC~~ 166 (698)
..|+++|=+-|..
T Consensus 190 eAGA~~ivlE~vp 202 (281)
T 1oy0_A 190 EAGAFAVVMEMVP 202 (281)
T ss_dssp HHTCSEEEEESCC
T ss_pred HcCCcEEEEecCC
Confidence 4789999999975
No 238
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=38.88 E-value=2.6e+02 Score=29.05 Aligned_cols=171 Identities=12% Similarity=0.053 Sum_probs=75.7
Q ss_pred CcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc--------cCCHHHHHHH---HH
Q psy13907 384 HVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIET--------LPAQEEAMVL---AE 452 (698)
Q Consensus 384 ~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ET--------i~~~~Eakaa---~~ 452 (698)
+.+|-|-+--|..|++||.. | .+.+++. ++++.+++.|+|+|=+-- ++.-+|.+-+ ++
T Consensus 41 ~~~vMGIlNvTPDSFsdgg~----~---~~~~~a~----~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~ 109 (318)
T 2vp8_A 41 RALIMAIVNRTPDSFYDKGA----T---FSDAAAR----DAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIE 109 (318)
T ss_dssp SCEEEEEEC---------------------CHHHH----HHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCcccCCCc----c---CCHHHHH----HHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 45788888888888888743 2 3444444 466778889999986552 3336666655 45
Q ss_pred HHHhcC-CCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcCCChhhhHHHHHHhcCCCCEEEecCCCC-C
Q psy13907 453 LIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAGRDVPLLCCPNSGE-T 530 (698)
Q Consensus 453 a~~~~~-~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~~~~pl~~yPNaG~-~ 530 (698)
++++.. +.| ||+--.+ - +++++..+. +.. +.--++...-..|.+++++. +.|+++.++.|. |
T Consensus 110 ~l~~~~~~vp--ISIDT~~------~----~VaeaAl~a-Ga~-iINDVsg~~d~~m~~vaa~~--g~~vVlmh~~G~~p 173 (318)
T 2vp8_A 110 WLRGAYPDQL--ISVDTWR------A----QVAKAACAA-GAD-LINDTWGGVDPAMPEVAAEF--GAGLVCAHTGGALP 173 (318)
T ss_dssp HHHHHSTTCE--EEEECSC------H----HHHHHHHHH-TCC-EEEETTSSSSTTHHHHHHHH--TCEEEEECC-----
T ss_pred HHHhhCCCCe--EEEeCCC------H----HHHHHHHHh-CCC-EEEECCCCCchHHHHHHHHh--CCCEEEECCCCCCc
Confidence 555422 555 4653211 1 344443332 222 21222222234566666665 689999999887 5
Q ss_pred cCCCCcccccCCCh--------hhHHHHHHHHHHcCCe---EE---eecCCCchHHHHHHHhcccc
Q psy13907 531 FDPGQRIWMNKDSV--------PSVDTYVPRWLDTGVK---YV---GGCCRTNADDMKNVNQVPVK 582 (698)
Q Consensus 531 ~d~~~g~~~~~~~p--------~~~a~~~~~~~~~G~~---ii---GGCCGTtP~hI~al~~~v~~ 582 (698)
.+-+.. -.|..++ +.+.+.+....+.|+. || |=--+-+.+|--++-+.++.
T Consensus 174 ~tmq~~-~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~~ 238 (318)
T 2vp8_A 174 RTRPFR-VSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVAD 238 (318)
T ss_dssp ---------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHHH
T ss_pred cccccc-cccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHHH
Confidence 421111 1111011 2234445556678974 54 31123466665554444443
No 239
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=38.80 E-value=1.6e+02 Score=31.30 Aligned_cols=65 Identities=17% Similarity=0.147 Sum_probs=42.9
Q ss_pred HHHHHHHHhCCCCEEEEec-CcCHHHHHHHHHHHHhcC-CCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEE
Q psy13907 84 RPRIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVG 161 (698)
Q Consensus 84 ~~qi~~l~~~GVD~il~ET-i~~l~Ea~aa~~a~~~~~-~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIG 161 (698)
.++++.+.+.|+|++.+-+ ..+.......++.+++.. ++|+++. .+.+.+++.. +. ..++|+|.
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~----------~v~~~~~a~~-a~---~~Gad~I~ 220 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAG----------NIVTKEAALD-LI---SVGADCLK 220 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEE----------EECSHHHHHH-HH---TTTCSEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEc----------CCCcHHHHHH-HH---hcCCCEEE
Confidence 4567778889999988743 334455667778887754 7899872 1234554433 32 36889988
Q ss_pred E
Q psy13907 162 V 162 (698)
Q Consensus 162 i 162 (698)
+
T Consensus 221 v 221 (404)
T 1eep_A 221 V 221 (404)
T ss_dssp E
T ss_pred E
Confidence 8
No 240
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=38.77 E-value=1.7e+02 Score=29.59 Aligned_cols=102 Identities=15% Similarity=0.124 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhCC-CCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEE
Q psy13907 420 YHRPRIEALIQGG-IDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 498 (698)
Q Consensus 420 ~y~~qi~~L~~~G-vDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~i 498 (698)
.|.+.++..++.| +|++=+|-..+-.-.+.++..+++ .+..+++|.-- -..+++-..+.+.++.+.. .+.+.+
T Consensus 120 ~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~-~~~kvI~S~Hd--f~~tP~~~el~~~~~~~~~---~GaDIv 193 (276)
T 3o1n_A 120 QYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQ-HNVAVIMSNHD--FHKTPAAEEIVQRLRKMQE---LGADIP 193 (276)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHH-TTCEEEEEEEE--SSCCCCHHHHHHHHHHHHH---TTCSEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHh-CCCEEEEEeec--CCCCcCHHHHHHHHHHHHH---cCCCEE
Confidence 4556666666677 999999987776666667776666 47889999853 2234442233333333322 233333
Q ss_pred EEcC--CChhhhHHHHHHh---c---CCCCEEEecCC
Q psy13907 499 GVNC--LAPHYVESLLTSA---G---RDVPLLCCPNS 527 (698)
Q Consensus 499 GlNC--~~p~~~~~~l~~l---~---~~~pl~~yPNa 527 (698)
=+-+ ...++...+++.. . .+.|++++.=+
T Consensus 194 Kia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 230 (276)
T 3o1n_A 194 KIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMS 230 (276)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECS
T ss_pred EEEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 3433 4566655555433 2 56799888544
No 241
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=38.74 E-value=23 Score=36.36 Aligned_cols=54 Identities=15% Similarity=0.239 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCc
Q psy13907 417 LIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDK 479 (698)
Q Consensus 417 l~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~ 479 (698)
..+.-.++++++.++|+|.|++|-+++. +++.+.+.+ ++|++ .. ..|.-+||+-
T Consensus 171 ~a~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~l----~iP~i-gI---GaG~~cdgQv 224 (275)
T 3vav_A 171 GAAQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTREL----SIPTI-GI---GAGAECSGQV 224 (275)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHHC----SSCEE-EE---SSCSCSSEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHhC----CCCEE-EE---ccCCCCCcee
Confidence 3466668899999999999999999985 666654443 57864 33 4455567763
No 242
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=38.55 E-value=83 Score=32.01 Aligned_cols=150 Identities=13% Similarity=0.086 Sum_probs=78.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHh
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAK 490 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~ 490 (698)
..+.+++.+.-.+.++.|.+.|+|++++=+.... ..++..+++..++||+ .. +..+++.....
T Consensus 63 ~~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas---~~~l~~lr~~~~iPVi-gi-------------~e~a~~~A~~~ 125 (286)
T 2jfq_A 63 PRPGEQVKQYTVEIARKLMEFDIKMLVIACNTAT---AVALEYLQKTLSISVI-GV-------------IEPGARTAIMT 125 (286)
T ss_dssp TSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH---HHHHHHHHHHCSSEEE-ES-------------HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchh---HHHHHHHHHhCCCCEE-ec-------------cHHHHHHHHHh
Confidence 4678999999999999999999999998553322 2357778766688964 21 12333333221
Q ss_pred CCCCceEEEEcCCCh----hhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCC-hhhHHHHHHHHHHcCCe-EEee
Q psy13907 491 NPAQLVAVGVNCLAP----HYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDS-VPSVDTYVPRWLDTGVK-YVGG 564 (698)
Q Consensus 491 ~~~~~~~iGlNC~~p----~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~-p~~~a~~~~~~~~~G~~-iiGG 564 (698)
... .-|||=.+.. ......+++...+..+...|..+.......|.+..... ...+.++++.+.+.|+. ||=|
T Consensus 126 ~~~--~rIgVLaT~~T~~~~~y~~~l~~~~~~~~v~~~~~~~~v~~ie~g~~~~~~~~~~~l~~~~~~l~~~g~D~IVLG 203 (286)
T 2jfq_A 126 TRN--QNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRNSESDTVILG 203 (286)
T ss_dssp CSS--SEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECTTHHHHHHTTCTTCHHHHHHHHHHHHGGGTTCSCSEEEEE
T ss_pred cCC--CEEEEEeChHHhcchHHHHHHHHhCCCCEEEecCCHHHHHHHHcCCCCCchhHHHHHHHHHHHHHhCCCCEEEEc
Confidence 112 2456644432 23455555554344454455443211112231100111 22345555556556733 4556
Q ss_pred cCCCchHHHHHHHhcc
Q psy13907 565 CCRTNADDMKNVNQVP 580 (698)
Q Consensus 565 CCGTtP~hI~al~~~v 580 (698)
|-+-.. -...+.+.+
T Consensus 204 CTh~p~-l~~~i~~~l 218 (286)
T 2jfq_A 204 CTHYPL-LYKPIYDYF 218 (286)
T ss_dssp SSSGGG-GHHHHHHHT
T ss_pred CcCHHH-HHHHHHHHc
Confidence 755443 334444433
No 243
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=38.54 E-value=35 Score=37.14 Aligned_cols=35 Identities=26% Similarity=0.121 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCCEEEeccc-CCHHHHHHHHHHHHh
Q psy13907 421 HRPRIEALIQGGIDLLAIETL-PAQEEAMVLAELIKE 456 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi-~~~~Eakaa~~a~~~ 456 (698)
--++++++.+ |+|+|++|+. ++..|++....+++.
T Consensus 273 AI~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~ 308 (435)
T 3lg3_A 273 AISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHA 308 (435)
T ss_dssp HHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhcc
Confidence 3467888898 9999999996 799999999999985
No 244
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=38.54 E-value=3.4e+02 Score=27.79 Aligned_cols=162 Identities=14% Similarity=0.198 Sum_probs=91.1
Q ss_pred CcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEeccc---------CCHHHHHHHH---
Q psy13907 384 HVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETL---------PAQEEAMVLA--- 451 (698)
Q Consensus 384 ~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi---------~~~~Eakaa~--- 451 (698)
+.+|-|-+=-|..|++||.. | .+. +.-.++++.+++.|+|+|=+--- +.-+|.+-++
T Consensus 39 ~~~iMgilNvTPDSFsdgg~----~---~~~----~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI 107 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGS----Y---NEV----DAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMI 107 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCB----H---HHH----HHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccCCc----c---CCH----HHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 45788888888788887632 2 122 34445677788899999866532 2366776666
Q ss_pred HHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC-CC---hhhhHHHHHHhcCCCCEEEecCC
Q psy13907 452 ELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC-LA---PHYVESLLTSAGRDVPLLCCPNS 527 (698)
Q Consensus 452 ~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC-~~---p~~~~~~l~~l~~~~pl~~yPNa 527 (698)
+++++..+.|+ |+- . .+- +++++..+. +.. . +|= .+ -+.|.+++++. +.|+++.++.
T Consensus 108 ~~l~~~~~vpi--SID--T----~~~----~V~~aAl~a-Ga~-i---INdvsg~~~d~~m~~~aa~~--g~~vVlmh~~ 168 (297)
T 1tx2_A 108 QAVSKEVKLPI--SID--T----YKA----EVAKQAIEA-GAH-I---INDIWGAKAEPKIAEVAAHY--DVPIILMHNR 168 (297)
T ss_dssp HHHHHHSCSCE--EEE--C----SCH----HHHHHHHHH-TCC-E---EEETTTTSSCTHHHHHHHHH--TCCEEEECCC
T ss_pred HHHHhcCCceE--EEe--C----CCH----HHHHHHHHc-CCC-E---EEECCCCCCCHHHHHHHHHh--CCcEEEEeCC
Confidence 55554346675 442 1 111 333333322 222 2 354 22 34555665555 6899999998
Q ss_pred CCCcCCCCcccccCCCh----hhHHHHHHHHHHcCCe---EE---eecCCCchHHHHHHHhccccC
Q psy13907 528 GETFDPGQRIWMNKDSV----PSVDTYVPRWLDTGVK---YV---GGCCRTNADDMKNVNQVPVKF 583 (698)
Q Consensus 528 G~~~d~~~g~~~~~~~p----~~~a~~~~~~~~~G~~---ii---GGCCGTtP~hI~al~~~v~~~ 583 (698)
|.|. | +... +.+.+.+....+.|+. |+ |=--|.+.+|--.+-+.++..
T Consensus 169 G~p~------y--~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~~ll~~l~~l 226 (297)
T 1tx2_A 169 DNMN------Y--RNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQL 226 (297)
T ss_dssp SCCC------C--SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGG
T ss_pred CCCC------c--chHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHHHHHHHHHHHHHH
Confidence 7553 2 1112 3345556667788975 54 211256777766665555543
No 245
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=38.51 E-value=1e+02 Score=30.46 Aligned_cols=67 Identities=13% Similarity=0.197 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecCc--------CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHH
Q psy13907 77 QELIDYHRPRIEALIQGGIDLLAIETLP--------AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARD 148 (698)
Q Consensus 77 eel~~~~~~qi~~l~~~GVD~il~ETi~--------~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~ 148 (698)
+.+.+.+++.++...+.||. |++|+++ +..++..+++.+.. | .+.++++.......|.++.+.++.
T Consensus 128 ~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v~~----~-~vg~~~D~~h~~~~g~d~~~~l~~ 201 (294)
T 3vni_A 128 ERSVESVREVAKVAEACGVD-FCLEVLNRFENYLINTAQEGVDFVKQVDH----N-NVKVMLDTFHMNIEEDSIGGAIRT 201 (294)
T ss_dssp HHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHHCC----T-TEEEEEEHHHHHHHCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccCCHHHHHHHHHHcCC----C-CEEEEEEhhhhHHcCCCHHHHHHH
Confidence 44455555555555567986 6679884 56666666555432 3 245555433334467888888876
Q ss_pred H
Q psy13907 149 V 149 (698)
Q Consensus 149 l 149 (698)
+
T Consensus 202 ~ 202 (294)
T 3vni_A 202 A 202 (294)
T ss_dssp H
T ss_pred h
Confidence 6
No 246
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=38.44 E-value=2e+02 Score=28.26 Aligned_cols=88 Identities=15% Similarity=0.080 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcC-CCc-cCCCCCHHHHHHHHHhhCCCCceE
Q psy13907 82 YHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKD-EKH-TCHGDKFGLIARDVYAKNPAQLVA 159 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~-~g~-l~~G~~~~~~~~~l~~~~~~~~~a 159 (698)
...+++++..++|+..|...+ .+. ++.+|+..++|++ -..-++ .+. ..-+.+++++.+.+. .|++.
T Consensus 37 ~~~~~A~a~~~~Ga~~i~~~~---~~~----i~~ir~~v~~Pvi-g~~k~d~~~~~~~I~~~~~~i~~~~~----~Gad~ 104 (232)
T 3igs_A 37 IVAAMALAAEQAGAVAVRIEG---IDN----LRMTRSLVSVPII-GIIKRDLDESPVRITPFLDDVDALAQ----AGAAI 104 (232)
T ss_dssp HHHHHHHHHHHTTCSEEEEES---HHH----HHHHHTTCCSCEE-EECBCCCSSCCCCBSCSHHHHHHHHH----HTCSE
T ss_pred hHHHHHHHHHHCCCeEEEECC---HHH----HHHHHHhcCCCEE-EEEeecCCCcceEeCccHHHHHHHHH----cCCCE
Confidence 455678888899999988753 433 3445555789984 332222 121 111234555544332 58999
Q ss_pred EEEcCC---ChhhhHHHHHHhHhhc
Q psy13907 160 VGVNCL---APHYVESLLTSAEVEG 181 (698)
Q Consensus 160 IGiNC~---~p~~i~~~l~~~~~~~ 181 (698)
|-++++ .|+.+..+++.+++.+
T Consensus 105 V~l~~~~~~~p~~l~~~i~~~~~~g 129 (232)
T 3igs_A 105 IAVDGTARQRPVAVEALLARIHHHH 129 (232)
T ss_dssp EEEECCSSCCSSCHHHHHHHHHHTT
T ss_pred EEECccccCCHHHHHHHHHHHHHCC
Confidence 999997 4777888888876643
No 247
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A
Probab=38.31 E-value=1.9e+02 Score=32.32 Aligned_cols=51 Identities=12% Similarity=0.139 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhCC--CCEEEEec-----CcCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy13907 80 IDYHRPRIEALIQGG--IDLLAIET-----LPAQEEAMVLAELIKEYPGLKAWIS-FSCK 131 (698)
Q Consensus 80 ~~~~~~qi~~l~~~G--VD~il~ET-----i~~l~Ea~aa~~a~~~~~~~Pv~iS-ft~~ 131 (698)
.+.+..+++.|.+.| +|.|-+.. .|+..+++.+++.+.. .++||||| +-+.
T Consensus 359 ~~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~p~~~~i~~~L~~~a~-lGlpI~ITElDv~ 417 (530)
T 1us2_A 359 TTKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAAMKKVVD-LGLLVKITELDVA 417 (530)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHCCCceeEEEEeeecCCCCCCHHHHHHHHHHHHh-cCCeEEEEeCccC
Confidence 345667888888788 59998853 4788999999988887 58999998 4443
No 248
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=38.04 E-value=27 Score=38.02 Aligned_cols=81 Identities=19% Similarity=0.250 Sum_probs=53.3
Q ss_pred HHHHHHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcCCCeE-EEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEE
Q psy13907 421 HRPRIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYPGLKA-WISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 498 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ET-i~~~~Eakaa~~a~~~~~~~Pv-~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~i 498 (698)
--++++++.+ |+|+|++|| .++..|++...++++.. .|+ ++...+.. ++. |.
T Consensus 269 AI~Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~~--~P~~~La~n~sP--------sf~------w~--------- 322 (429)
T 1f8m_A 269 CIARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKAE--YPDQMLAYNCSP--------SFN------WK--------- 322 (429)
T ss_dssp HHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHTT--CTTCEEEEECCT--------TSC------HH---------
T ss_pred HHHHHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhccc--CCCceeecCCCC--------CCC------cc---------
Confidence 4467788888 899999998 89999999999999842 232 12222111 010 00
Q ss_pred EEcCCChhhhHHHHHHhc-CCCCEEEecCCCC
Q psy13907 499 GVNCLAPHYVESLLTSAG-RDVPLLCCPNSGE 529 (698)
Q Consensus 499 GlNC~~p~~~~~~l~~l~-~~~pl~~yPNaG~ 529 (698)
.| ..++.+..+.++|. ...-+..||+++.
T Consensus 323 -~~-~~~~~~~~f~~eL~~lG~~~v~~~l~~~ 352 (429)
T 1f8m_A 323 -KH-LDDATIAKFQKELAAMGFKFQFITLAGF 352 (429)
T ss_dssp -HH-CCHHHHHHHHHHHHHHTEEEEEETTHHH
T ss_pred -cc-cchhhHhHHHHHHHHcCCeEEEECcHHH
Confidence 01 25667777777776 5666788888863
No 249
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=37.89 E-value=58 Score=32.98 Aligned_cols=50 Identities=8% Similarity=0.210 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcC-CCeEE
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYP-GLKAW 125 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~-~~Pv~ 125 (698)
.-+.+++.++-.+.++.|.+.|+|+|++=+-..- ..+++.+++.. ++||+
T Consensus 48 ~~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~---~~al~~lr~~~~~iPvi 98 (268)
T 3out_A 48 TKSRATIQKFAAQTAKFLIDQEVKAIIIACNTIS---AIAKDIVQEIAKAIPVI 98 (268)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHH---HHHHHHHHHHHTTSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChH---HHHHHHHHHhcCCCCEE
Confidence 3577999999999999999999999996532211 23455666544 78876
No 250
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=37.73 E-value=1e+02 Score=31.37 Aligned_cols=150 Identities=13% Similarity=0.059 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHh
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAK 490 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~ 490 (698)
..+.+++.+.-.+.++.|.+.|+|+|++=+.... ..++..+++..++||+ .. +..+++.....
T Consensus 65 ~~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas---~~~l~~lr~~~~iPVi-gi-------------iepa~~~A~~~ 127 (290)
T 2vvt_A 65 PRPAEQVVQFTWEMADFLLKKRIKMLVIACNTAT---AVALEEIKAALPIPVV-GV-------------ILPGARAAVKV 127 (290)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHCSSCEE-ES-------------SHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcchh---HHHHHHHHHhCCCCEE-cc-------------cHHHHHHHHHh
Confidence 4678999999999999999999999998654432 2357778776688965 21 12233333211
Q ss_pred CCCCceEEEEcCCChh----hhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCe-EEeec
Q psy13907 491 NPAQLVAVGVNCLAPH----YVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVK-YVGGC 565 (698)
Q Consensus 491 ~~~~~~~iGlNC~~p~----~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~-iiGGC 565 (698)
... .-|||=.+... .....++....+..+.-.|..+.......|.+......+.+.++++.+.+.|+. ||=||
T Consensus 128 ~~~--~rIgVLaT~~T~~s~~y~~~l~~~~~~~~v~~~~~~~lv~~ve~g~~~~~~~~~~l~~~l~~l~~~g~D~IVLGC 205 (290)
T 2vvt_A 128 TKN--NKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQYRSSVAKKIVAETLQALQLKGLDTLILGC 205 (290)
T ss_dssp CSS--SEEEEEECHHHHHTTHHHHHHHTTCTTSEEEEEECTTHHHHHHTTCTTSHHHHHHHHHHHGGGTTSCCSEEEECS
T ss_pred cCC--CEEEEEeCcHhhhhHHHHHHHHHhCCCCEEEeccCHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 112 24666554322 345555555434444434544321111223110011122355555555556733 44457
Q ss_pred CCCchHHHHHHHhcc
Q psy13907 566 CRTNADDMKNVNQVP 580 (698)
Q Consensus 566 CGTtP~hI~al~~~v 580 (698)
-.-.. -...+.+.+
T Consensus 206 Th~p~-l~~~i~~~l 219 (290)
T 2vvt_A 206 THYPL-LRPVIQNVM 219 (290)
T ss_dssp TTGGG-GHHHHHHHH
T ss_pred cCHHH-HHHHHHHHc
Confidence 54433 344444444
No 251
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=37.63 E-value=2.8e+02 Score=28.39 Aligned_cols=173 Identities=17% Similarity=0.108 Sum_probs=85.9
Q ss_pred cEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecc---cCC------HHHHHHHHHHHH
Q psy13907 385 VRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIET---LPA------QEEAMVLAELIK 455 (698)
Q Consensus 385 ~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ET---i~~------~~Eakaa~~a~~ 455 (698)
.+|-|-+-=|..|++||..| .+.+.+. ++++.+++.|+|+|=+-- -|. -.|.+-++.+++
T Consensus 23 ~~iMgilNvTPDSFsdgg~~-------~~~~~a~----~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~ 91 (294)
T 2y5s_A 23 PLVMGILNATPDSFSDGGRF-------LARDDAL----RRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVE 91 (294)
T ss_dssp CEEEEEEECCC-----------------CTTHHH----HHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCCCCCCCc-------CCHHHHH----HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHH
Confidence 57888888888888887432 3455544 466777889999985543 333 566666655555
Q ss_pred hcC--CCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcCCChhhhHHHHHHhcCCCCEEEecCCCCCcCC
Q psy13907 456 EYP--GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAGRDVPLLCCPNSGETFDP 533 (698)
Q Consensus 456 ~~~--~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~~~~pl~~yPNaG~~~d~ 533 (698)
... +.|+ |+-..+ - +++++..+. +. .+.--+|-..-..|.+++++ .+.|+++.++-|.|.+.
T Consensus 92 ~l~~~~vpi--SIDT~~------~----~Va~aAl~a-Ga-~iINdVsg~~d~~m~~~~a~--~~~~vVlmh~~G~p~tm 155 (294)
T 2y5s_A 92 ALRPLNVPL--SIDTYK------P----AVMRAALAA-GA-DLINDIWGFRQPGAIDAVRD--GNSGLCAMHMLGEPQTM 155 (294)
T ss_dssp HHGGGCSCE--EEECCC------H----HHHHHHHHH-TC-SEEEETTTTCSTTHHHHHSS--SSCEEEEECCCEETTTT
T ss_pred HHhhCCCeE--EEECCC------H----HHHHHHHHc-CC-CEEEECCCCCchHHHHHHHH--hCCCEEEECCCCCCccc
Confidence 432 5564 552111 1 344443332 22 23222333222334444333 57899999998866532
Q ss_pred CCcccccCCC----hhhHHHHHHHHHHcCCe---EEeec---CCCch-HHHHHHHhccccCC
Q psy13907 534 GQRIWMNKDS----VPSVDTYVPRWLDTGVK---YVGGC---CRTNA-DDMKNVNQVPVKFS 584 (698)
Q Consensus 534 ~~g~~~~~~~----p~~~a~~~~~~~~~G~~---iiGGC---CGTtP-~hI~al~~~v~~~~ 584 (698)
......|+.- -+.+.+.+....+.|+. ||==+ -+-|. +|--.+-+.++..+
T Consensus 156 ~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~~~n~~ll~~l~~l~ 217 (294)
T 2y5s_A 156 QVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTA 217 (294)
T ss_dssp EECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTTHHHHHHHHTGGGGS
T ss_pred cccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCcccccchHHHHHHHHHHHHHH
Confidence 1011111110 22344555666778975 54211 24466 66666666666554
No 252
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=37.60 E-value=2.2e+02 Score=28.64 Aligned_cols=123 Identities=16% Similarity=0.125 Sum_probs=67.4
Q ss_pred HHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEE
Q psy13907 421 HRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGV 500 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGl 500 (698)
..+.++.|.++|+|+|=+ +.|+ .| =+.||..+.++.....+
T Consensus 34 ~~~~~~~l~~~GaD~iEl--------------------giPf------SD--P~aDGp~Iq~a~~~AL~----------- 74 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALEL--------------------GFPF------SD--PLADGPVIQGANLRSLA----------- 74 (267)
T ss_dssp HHHHHHHHHHTTCSSEEE--------------------ECCC------SC--CTTCCHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHHcCCCEEEE--------------------CCCC------CC--CCCCCHHHHHHHHHHHH-----------
Confidence 567788899999999854 2332 11 23567666654443322
Q ss_pred cCCChhhhHHHHHHhc---CCCCEEE--ecCC----CCCc-------CCCCcccccCCChhhHHHHHHHHHHcCCeEEee
Q psy13907 501 NCLAPHYVESLLTSAG---RDVPLLC--CPNS----GETF-------DPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGG 564 (698)
Q Consensus 501 NC~~p~~~~~~l~~l~---~~~pl~~--yPNa----G~~~-------d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiGG 564 (698)
|....+.+...+++++ .+.|+++ |-|- |... -..+|-...|..+++..++.+...+.|+..+==
T Consensus 75 ~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~l 154 (267)
T 3vnd_A 75 AGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFI 154 (267)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECE
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEE
Confidence 1133445555555554 3456544 4442 2110 012332334566666666666666778776555
Q ss_pred cCCCc-hHHHHHHHhcccc
Q psy13907 565 CCRTN-ADDMKNVNQVPVK 582 (698)
Q Consensus 565 CCGTt-P~hI~al~~~v~~ 582 (698)
|--|| ++.|+.+.+...+
T Consensus 155 iaP~t~~eri~~i~~~~~g 173 (267)
T 3vnd_A 155 APPNADADTLKMVSEQGEG 173 (267)
T ss_dssp ECTTCCHHHHHHHHHHCCS
T ss_pred ECCCCCHHHHHHHHHhCCC
Confidence 55544 4777777666543
No 253
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=37.52 E-value=40 Score=34.67 Aligned_cols=64 Identities=14% Similarity=0.175 Sum_probs=42.3
Q ss_pred HHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHh-cCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 86 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKE-YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 86 qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~-~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
|++..++.|+|+|++.+| +.++++.+++.++. ....|+.+|--+. ++.+.+ + ...++|.|.+-.
T Consensus 205 ea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieASGGIt----------~eni~~-~---a~tGVD~IsvGs 269 (285)
T 1o4u_A 205 DALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEVSGGIT----------EENVSL-Y---DFETVDVISSSR 269 (285)
T ss_dssp HHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEEECCC----------TTTGGG-G---CCTTCCEEEEGG
T ss_pred HHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEEECCCC----------HHHHHH-H---HHcCCCEEEEeH
Confidence 333345589999999996 66788888888875 2357888776443 222222 1 235788887765
No 254
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=37.48 E-value=1.2e+02 Score=34.16 Aligned_cols=46 Identities=17% Similarity=0.411 Sum_probs=32.0
Q ss_pred HHHHHHHHHhCCCCEEEecccC-CHHHHHHHHHHHHh-cCCCeEEEEE
Q psy13907 421 HRPRIEALIQGGIDLLAIETLP-AQEEAMVLAELIKE-YPGLKAWISF 466 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi~-~~~Eakaa~~a~~~-~~~~Pv~iS~ 466 (698)
..+++++|+++|||+|.+.|-. +.....-.++.+++ ++++||+..-
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGN 329 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGN 329 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEecc
Confidence 5689999999999999998653 33344455555653 5677876433
No 255
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=37.48 E-value=1.2e+02 Score=32.04 Aligned_cols=67 Identities=9% Similarity=-0.002 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhCCCCEEEEec-CcCHHHHHHHHHHHHhc-CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceE
Q psy13907 82 YHRPRIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVA 159 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ET-i~~l~Ea~aa~~a~~~~-~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~a 159 (698)
...++++.+.++|+|+|.+-| ......+...++.+|+. +++|+++-- -.+.+++...+. .++|+
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~----------V~T~e~A~~a~~----aGaD~ 165 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGN----------VATYAGADYLAS----CGADI 165 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEE----------ECSHHHHHHHHH----TTCSE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcC----------cCCHHHHHHHHH----cCCCE
Confidence 355678999999999988864 33444455567777764 578999731 124555544332 57888
Q ss_pred EEE
Q psy13907 160 VGV 162 (698)
Q Consensus 160 IGi 162 (698)
|-+
T Consensus 166 I~V 168 (361)
T 3r2g_A 166 IKA 168 (361)
T ss_dssp EEE
T ss_pred EEE
Confidence 777
No 256
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=37.43 E-value=1.3e+02 Score=31.76 Aligned_cols=65 Identities=11% Similarity=0.100 Sum_probs=42.3
Q ss_pred HHHHHHHHhCCCCEEEEecCc-CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEE
Q psy13907 84 RPRIEALIQGGIDLLAIETLP-AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGV 162 (698)
Q Consensus 84 ~~qi~~l~~~GVD~il~ETi~-~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGi 162 (698)
.++++.++++|+|+|.+-+-. +...+...++.+++..+.|+++... .+.+++..... .++|+|.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v----------~t~e~A~~l~~----aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV----------VTEEATKELIE----NGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEE----------CSHHHHHHHHH----TTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccC----------CCHHHHHHHHH----cCcCEEEE
Confidence 567888999999999886543 3445555666666534789987322 23444443332 57888877
No 257
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=37.37 E-value=2.4e+02 Score=28.12 Aligned_cols=101 Identities=15% Similarity=0.072 Sum_probs=59.9
Q ss_pred HHHHHHHHHhCC-CCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEE
Q psy13907 421 HRPRIEALIQGG-IDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVG 499 (698)
Q Consensus 421 y~~qi~~L~~~G-vDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iG 499 (698)
|....+.+.+.| +|++=+|-..+-.-.+..+..+++ .+..+++|.-- -..+++-+.+.+.+..+.. .+++.+=
T Consensus 101 ~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~-~~~kiI~S~Hd--f~~TP~~~el~~~~~~~~~---~gaDIvK 174 (258)
T 4h3d_A 101 YTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHK-KEVKVIISNHD--FNKTPKKEEIVSRLCRMQE---LGADLPK 174 (258)
T ss_dssp HHHHHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHH-TTCEEEEEEEE--SSCCCCHHHHHHHHHHHHH---TTCSEEE
T ss_pred HHHHHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHh-CCCEEEEEEec--CCCCCCHHHHHHHHHHHHH---hCCCEEE
Confidence 444444455555 999999987777667777777776 57889999952 2233443334444444432 3334444
Q ss_pred EcC--CChhhhHHHHHHh---c---CCCCEEEecCC
Q psy13907 500 VNC--LAPHYVESLLTSA---G---RDVPLLCCPNS 527 (698)
Q Consensus 500 lNC--~~p~~~~~~l~~l---~---~~~pl~~yPNa 527 (698)
+-+ ...++...+++.. . .+.|++.+.=+
T Consensus 175 ia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG 210 (258)
T 4h3d_A 175 IAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMS 210 (258)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECT
T ss_pred EEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 434 4566666555433 2 57888776543
No 258
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=36.97 E-value=67 Score=34.27 Aligned_cols=50 Identities=22% Similarity=0.248 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhCC--CCEEEEe-----cCcCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy13907 81 DYHRPRIEALIQGG--IDLLAIE-----TLPAQEEAMVLAELIKEYPGLKAWIS-FSCK 131 (698)
Q Consensus 81 ~~~~~qi~~l~~~G--VD~il~E-----Ti~~l~Ea~aa~~a~~~~~~~Pv~iS-ft~~ 131 (698)
+.+..+++.|.+.| +|.|-+. ..|+..+++.+++.+.. .++||||| +-+.
T Consensus 209 ~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~-~Gl~i~iTElDi~ 266 (378)
T 1ur1_A 209 EATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAK-LGLRVHFTSLDVD 266 (378)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHHHHh-cCCeEEEEecccC
Confidence 45666888888888 5999997 45888999999988887 58999998 5454
No 259
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=36.95 E-value=1e+02 Score=29.77 Aligned_cols=85 Identities=13% Similarity=0.175 Sum_probs=49.7
Q ss_pred HHHHHHHHHhCCCCEEEEe-----cCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCc
Q psy13907 83 HRPRIEALIQGGIDLLAIE-----TLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQL 157 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~E-----Ti~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~ 157 (698)
..+.++.+.++|+|++=+= .++++......++.+++.++.|+.+-+.+.+ ..+.++.+.. .++
T Consensus 25 ~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd---------~~~~v~~~~~---~Ga 92 (230)
T 1rpx_A 25 LGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVE---------PDQRVPDFIK---AGA 92 (230)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSS---------HHHHHHHHHH---TTC
T ss_pred HHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecC---------HHHHHHHHHH---cCC
Confidence 3556888888999988663 2344322234445566645678888886654 2334444432 578
Q ss_pred eEEEEcCC--ChhhhHHHHHHhHh
Q psy13907 158 VAVGVNCL--APHYVESLLTSAEV 179 (698)
Q Consensus 158 ~aIGiNC~--~p~~i~~~l~~~~~ 179 (698)
++|-+-+. ..+.....++.++.
T Consensus 93 d~v~vh~~~~~~~~~~~~~~~~~~ 116 (230)
T 1rpx_A 93 DIVSVHCEQSSTIHLHRTINQIKS 116 (230)
T ss_dssp SEEEEECSTTTCSCHHHHHHHHHH
T ss_pred CEEEEEecCccchhHHHHHHHHHH
Confidence 88877776 43344444444433
No 260
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=36.66 E-value=1.3e+02 Score=31.12 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhCC--CCEEEEec-----CcCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy13907 81 DYHRPRIEALIQGG--IDLLAIET-----LPAQEEAMVLAELIKEYPGLKAWIS-FSCK 131 (698)
Q Consensus 81 ~~~~~qi~~l~~~G--VD~il~ET-----i~~l~Ea~aa~~a~~~~~~~Pv~iS-ft~~ 131 (698)
+.+..+++.|.+.| +|.|-+.. .++..+++..++.+.+ .++||||| +-+.
T Consensus 183 ~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l~~~a~-~G~pv~iTEldi~ 240 (313)
T 1v0l_A 183 QAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAA-LGVDVAITELDIQ 240 (313)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHT-TTCEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHHHHHHh-cCCeEEEEeCCcc
Confidence 45556788887777 59998864 2456778888888877 58999998 5554
No 261
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=36.63 E-value=98 Score=32.69 Aligned_cols=141 Identities=13% Similarity=0.150 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEec-ccC--CHHHH-HHHHHHHHhc-CCCeEEEEE-EecCCC---------ccCCC-
Q psy13907 414 PQELIDYHRPRIEALIQGGIDLLAIE-TLP--AQEEA-MVLAELIKEY-PGLKAWISF-SCKDEK---------HTCHG- 477 (698)
Q Consensus 414 ~del~~~y~~qi~~L~~~GvDlll~E-Ti~--~~~Ea-kaa~~a~~~~-~~~Pv~iS~-t~~~~g---------~l~~G- 477 (698)
.+++..+|++.++.|.++|+|+|-+- ... ...+. +.++.+++.. .++|.-+.+ .|..++ +..+.
T Consensus 166 ~~dlA~a~~~ei~~l~~aG~~~IQiDeP~l~~~~~~~~~~~v~~~n~~~~~~~~~~~iHiC~G~~~~~n~d~~~t~~~~~ 245 (357)
T 3rpd_A 166 AWEFAKILNEEAKELEAAGVDIIQFDEPAFNVFFDEVNDWGIACLERAIEGLKCETAVHICYGYGIKANTDWKKTLGSEW 245 (357)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECGGGGTCHHHHHHTHHHHHHHHHTTCCSEEEEEECSCCSSHHHHHHHTTSCSCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCccccccHHHHHHHHHHHHHHHHhCCCCceEEEEecCCccCCcccccccccccc
Confidence 57789999999999999999988653 211 12222 3455666632 334433322 343211 01111
Q ss_pred CcHHHHHHHHHHhCCCCceEEEEcCCChh-hhHHHHHHhc-CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 478 DKFGLIARDVYAKNPAQLVAVGVNCLAPH-YVESLLTSAG-RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 478 ~~l~~~v~~~~~~~~~~~~~iGlNC~~p~-~~~~~l~~l~-~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
-...+.+..+.+ .+++++.+-+..+. .+ .+++.+. ..+-+++++-. .. + -++++++.+.+++.+
T Consensus 246 g~y~~i~~~l~~---~~~D~i~lE~~~~r~~~-e~l~~~~~k~v~lGvvd~~-------s~-~--ve~~eev~~ri~~a~ 311 (357)
T 3rpd_A 246 RQYEEVFPKLQK---SNIDIISLECHNSHVPM-ELLELIRGKKVMVGAIDVA-------TD-T--IETAEEVADTLRKAL 311 (357)
T ss_dssp CGGGGTHHHHHH---SSCCEEEECCTTCCCCG-GGGGGGTTSEEEEECSCTT-------CS-S--CCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHh---CCCCEEEEEecCCCCCh-HHHHhcCCCEEEeccccCc-------CC-C--CCCHHHHHHHHHHHH
Confidence 124556666643 56788999984322 22 2233333 11222233221 11 1 367899999988887
Q ss_pred Hc-CCe--EEeecCCC
Q psy13907 556 DT-GVK--YVGGCCRT 568 (698)
Q Consensus 556 ~~-G~~--iiGGCCGT 568 (698)
+. |.. ++.=.||.
T Consensus 312 ~~v~~~~l~lsPdCGl 327 (357)
T 3rpd_A 312 KFVDADKLYPCTNCGM 327 (357)
T ss_dssp TTSCGGGEEEECSSCC
T ss_pred HhCCcccEEEeCCCCC
Confidence 64 544 89999995
No 262
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=36.55 E-value=3.5e+02 Score=27.26 Aligned_cols=40 Identities=20% Similarity=0.174 Sum_probs=25.1
Q ss_pred HHHHHHhCCCCEEEEecCcC----HHHHHHHHHHHHhcCCCeEE
Q psy13907 86 RIEALIQGGIDLLAIETLPA----QEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 86 qi~~l~~~GVD~il~ETi~~----l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
+++.+++.|+|+|=+=.-++ .+.+..+++++++..++|+.
T Consensus 39 ~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pis 82 (271)
T 2yci_X 39 WARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCC 82 (271)
T ss_dssp HHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEE
T ss_pred HHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEE
Confidence 45556679999987765553 44455556666654566753
No 263
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=36.44 E-value=1.2e+02 Score=31.95 Aligned_cols=128 Identities=14% Similarity=0.222 Sum_probs=75.2
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhhhccCCccCCCCeEEEEecCCcCCCCCCCCCccCCCCCCCCHHHHHHHHHHHHHH
Q psy13907 10 LGLSEDQSVQLIRDAVKYVKEAIVLEEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEA 89 (698)
Q Consensus 10 ~gl~~~~~~eln~~Av~lAreA~~~~~~~~~~~~~~~v~VAGSIGP~g~~l~~gseY~g~y~~~~s~eel~~~~~~qi~~ 89 (698)
+|++=..+.||+++++.-|+.. ....||--.|- ..|.++ ...+.+++.+.|.+|++.
T Consensus 89 MGLDW~~a~ELIrRs~aeA~~~-------------pg~~ia~G~GT--DqL~~~--------~~~~l~~V~~AY~EQ~~~ 145 (396)
T 4dnh_A 89 MGLGWPEARELIRRSLAEARGR-------------PDALIACGAGT--DHLAPG--------PDVSIDDILAAYESQIEA 145 (396)
T ss_dssp TTBCHHHHHHHHHHHHHHHHTS-------------SSCCEEEEECC--TTSCCC--------TTCCHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHhcC-------------CCCeeeeccCc--CCCCCC--------CCCCHHHHHHHHHHHHHH
Confidence 4677677888888887655422 12334444443 234332 235889999999999999
Q ss_pred HHhCCCCEEEEecCcCHHHHHHH----------HHHHHhcCCCeEEEEEE---EcCC--CccCCCC-CHHHHHHHHH---
Q psy13907 90 LIQGGIDLLAIETLPAQEEAMVL----------AELIKEYPGLKAWISFS---CKDE--KHTCHGD-KFGLIARDVY--- 150 (698)
Q Consensus 90 l~~~GVD~il~ETi~~l~Ea~aa----------~~a~~~~~~~Pv~iSft---~~~~--g~l~~G~-~~~~~~~~l~--- 150 (698)
..+.|.-+|+ |-|-.=++++ -+.+.+ .+.||++..- |++. |+ -|. ++.++.+.+.
T Consensus 146 Ve~~G~~~IL---MASRaLA~~A~~pdDY~~VY~~vL~q-~~~PVILHWLG~mFDPaL~GY--WGs~d~~~A~~t~l~lI 219 (396)
T 4dnh_A 146 IEAEGGRIIL---MASRALAAAAKGPEDYIRVYDRVLSQ-VKEPVIIHWLGEMFDPALEGY--WGNADHMAAMKTCLDVL 219 (396)
T ss_dssp HHHTTCCEEE---CCCHHHHHHCCSHHHHHHHHHHHHHH-CSSCEEEEEECTTTCGGGTTT--TSCSSHHHHHHHHHHHH
T ss_pred HHHcCCeEEE---ehhHHHHHHhCCHHHHHHHHHHHHHh-cCCCEEEEecccccChhhccc--cCCCCHHHHHHHHHHHH
Confidence 9999999998 6664333322 222333 5789988764 2221 22 233 3555555432
Q ss_pred hhCCCCceEEEEcCCC
Q psy13907 151 AKNPAQLVAVGVNCLA 166 (698)
Q Consensus 151 ~~~~~~~~aIGiNC~~ 166 (698)
......+|+|=|.=-.
T Consensus 220 ~~~~~kVDGIKiSLLD 235 (396)
T 4dnh_A 220 EAHAAKVDGIKISLLS 235 (396)
T ss_dssp HHTGGGEEEEEEESCC
T ss_pred HhChhhcCceEEeeec
Confidence 2233467777665433
No 264
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=36.36 E-value=1.8e+02 Score=28.17 Aligned_cols=75 Identities=12% Similarity=0.042 Sum_probs=43.6
Q ss_pred HHHHHHHhCCCCEEEEe--cCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCC-----CHHHHHHHHHhhCCCCc
Q psy13907 85 PRIEALIQGGIDLLAIE--TLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGD-----KFGLIARDVYAKNPAQL 157 (698)
Q Consensus 85 ~qi~~l~~~GVD~il~E--Ti~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~-----~~~~~~~~l~~~~~~~~ 157 (698)
++++.+++.|+|.+.+= .+++...++.+++.. +..+.+++.+..+....+|. +..+.+..+.. .++
T Consensus 88 ~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~----g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~---~G~ 160 (244)
T 1vzw_A 88 DTLAAALATGCTRVNLGTAALETPEWVAKVIAEH----GDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNK---EGC 160 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH----GGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHH---TTC
T ss_pred HHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHc----CCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHh---CCC
Confidence 56777888999998874 455655444444433 23466777765321112222 55666555542 578
Q ss_pred eEEEEcCCC
Q psy13907 158 VAVGVNCLA 166 (698)
Q Consensus 158 ~aIGiNC~~ 166 (698)
+.|.++...
T Consensus 161 ~~i~~~~~~ 169 (244)
T 1vzw_A 161 ARYVVTDIA 169 (244)
T ss_dssp CCEEEEEC-
T ss_pred CEEEEeccC
Confidence 888887654
No 265
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=36.25 E-value=60 Score=33.41 Aligned_cols=27 Identities=26% Similarity=0.234 Sum_probs=20.3
Q ss_pred ccChHHHHHHHHHHHHHhcchhhccc-cc
Q psy13907 311 HSNRQAVIDTHRDYVRAGCDIVTTNT-YQ 338 (698)
Q Consensus 311 l~~Pe~V~~iH~~yl~AGAdII~TNT-f~ 338 (698)
|+..++ ...-+-=.+||||.|-|.| |.
T Consensus 185 Lt~eei-~~A~~ia~eaGADfVKTSTGf~ 212 (288)
T 3oa3_A 185 LTADEI-IAGCVLSSLAGADYVKTSTGFN 212 (288)
T ss_dssp CCHHHH-HHHHHHHHHTTCSEEECCCSSS
T ss_pred CCHHHH-HHHHHHHHHcCCCEEEcCCCCC
Confidence 455554 4466777899999999998 75
No 266
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=36.08 E-value=3.2e+02 Score=31.87 Aligned_cols=137 Identities=12% Similarity=0.127 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEE-ecC-c---CHHHHHHHHHHHHhc----CCCeEEEEEEEcCCCccCCCCCHH-HH
Q psy13907 76 PQELIDYHRPRIEALIQGGIDLLAI-ETL-P---AQEEAMVLAELIKEY----PGLKAWISFSCKDEKHTCHGDKFG-LI 145 (698)
Q Consensus 76 ~eel~~~~~~qi~~l~~~GVD~il~-ETi-~---~l~Ea~aa~~a~~~~----~~~Pv~iSft~~~~g~l~~G~~~~-~~ 145 (698)
.+.+.+.|.+.++.|.+.|++.|-| |.. . +-+...++..+.+.+ .+.++++...+. ++. +.
T Consensus 181 l~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~G---------~~~~~~ 251 (765)
T 1u1j_A 181 LPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFA---------DIPAEA 251 (765)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTCSSEEEEECCSS---------CCCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCCC---------CcchHH
Confidence 5789999999999999999998654 422 1 222334444555554 256766665443 122 44
Q ss_pred HHHHHhhCCCC-ceEEEEcCCChh-hhHHHHHHhHhhccc--ccccccccccCCChHHHHHHHHHHHHcCCCCCCCcCCC
Q psy13907 146 ARDVYAKNPAQ-LVAVGVNCLAPH-YVESLLTSAEVEGQS--LELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIP 221 (698)
Q Consensus 146 ~~~l~~~~~~~-~~aIGiNC~~p~-~i~~~l~~~~~~~~~--~~~p~~~~~~~~gP~~~~~~~~~l~~~~~~~~~~~~~~ 221 (698)
+..+. ..+ ++++++-+.... .+..+.+.+.. ++. +++-+.-....+.|+.++..++++.+. ++
T Consensus 252 ~~~l~---~l~~vd~l~lD~v~~~~~l~~l~~~l~~-~k~L~lGvVdgrni~~~d~e~v~~~l~~~~~~---------lg 318 (765)
T 1u1j_A 252 YKTLT---SLKGVTAFGFDLVRGTKTLDLVKAGFPE-GKYLFAGVVDGRNIWANDFAASLSTLQALEGI---------VG 318 (765)
T ss_dssp HHHHT---TCTTCCEEEEESSSCTTHHHHHHHCCCS-SCEEEEEEECSSSCBCCCHHHHHHHHHHHHHH---------CC
T ss_pred HHHHH---cCCCCcEEEEEecCCcccHHHHHHhcCC-CCEEEEEeeCCcccCCCCHHHHHHHHHHHHHh---------cC
Confidence 55443 367 999999986532 33222221211 111 222222224478899999999988764 11
Q ss_pred cCccEEeecCCCCc
Q psy13907 222 FEAPLKAKPNRSLF 235 (698)
Q Consensus 222 ~~~~~~~~pnag~p 235 (698)
.+ -+.+.|+-|+.
T Consensus 319 ~~-~l~lspsCgL~ 331 (765)
T 1u1j_A 319 KD-KLVVSTSCSLL 331 (765)
T ss_dssp SS-CEEEEESSCGG
T ss_pred CC-cEEEcCCCCcc
Confidence 12 38999999987
No 267
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=36.06 E-value=42 Score=36.14 Aligned_cols=49 Identities=14% Similarity=0.234 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhc----CCCeEEEEEEEc
Q psy13907 82 YHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEY----PGLKAWISFSCK 131 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~----~~~Pv~iSft~~ 131 (698)
.-..|+..|.++|+|++=+ |+|+.++++++-+.-+++ .++|++.-+.|+
T Consensus 39 aTv~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~ 91 (406)
T 4g9p_A 39 ATTAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFN 91 (406)
T ss_dssp HHHHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSS
T ss_pred HHHHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEeeeccc
Confidence 4456899999999999997 589998888765554432 579999988875
No 268
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=35.87 E-value=2.2e+02 Score=27.06 Aligned_cols=66 Identities=12% Similarity=0.190 Sum_probs=40.0
Q ss_pred HHHHHHHhCCCCEEEEecCcC--H-HHHHHHHHHHHhc-CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEE
Q psy13907 85 PRIEALIQGGIDLLAIETLPA--Q-EEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 160 (698)
Q Consensus 85 ~qi~~l~~~GVD~il~ETi~~--l-~Ea~aa~~a~~~~-~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aI 160 (698)
++++.+.+.|+|.+.+-+... . ..+..+++.+++. ++++++++. .++.++.... ..+++.|
T Consensus 79 ~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~-----------~t~~e~~~~~----~~G~d~i 143 (223)
T 1y0e_A 79 KEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADI-----------ATVEEAKNAA----RLGFDYI 143 (223)
T ss_dssp HHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEEC-----------SSHHHHHHHH----HTTCSEE
T ss_pred HHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecC-----------CCHHHHHHHH----HcCCCEE
Confidence 355666778999998876531 1 1234456666653 377876532 2466655432 2578999
Q ss_pred EEcCC
Q psy13907 161 GVNCL 165 (698)
Q Consensus 161 GiNC~ 165 (698)
+++-.
T Consensus 144 ~~~~~ 148 (223)
T 1y0e_A 144 GTTLH 148 (223)
T ss_dssp ECTTT
T ss_pred EeCCC
Confidence 87653
No 269
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=35.65 E-value=3.3e+02 Score=27.67 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEe-cC--cCHHHHHHHHHHHHhc-CCCe-EEEEEEEcCCCccCCCCCHHHHHHHHH
Q psy13907 81 DYHRPRIEALIQGGIDLLAIE-TL--PAQEEAMVLAELIKEY-PGLK-AWISFSCKDEKHTCHGDKFGLIARDVY 150 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~E-Ti--~~l~Ea~aa~~a~~~~-~~~P-v~iSft~~~~g~l~~G~~~~~~~~~l~ 150 (698)
+++.+.++.+.+.|+|.|.+= |+ ....++...++++++. ++.+ +.+++-+.++ .|.-+..++..+.
T Consensus 150 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd----~Gla~AN~laA~~ 220 (293)
T 3ewb_X 150 AFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDD----LGMATANALAAIE 220 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCC----cChHHHHHHHHHH
Confidence 466777888888999988765 44 3678888889888863 3332 6678888877 4777777777775
No 270
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=35.58 E-value=1.1e+02 Score=30.87 Aligned_cols=150 Identities=11% Similarity=0.021 Sum_probs=82.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHh
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAK 490 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~ 490 (698)
..+.+++.+.-.+.++.|.+.|+|++++=..... ..++..+++..++||+ .. +..+++.....
T Consensus 48 ~~s~~~i~~~~~~~~~~L~~~g~d~IViACNTas---~~~l~~lr~~~~iPVi-gi-------------iep~~~~A~~~ 110 (276)
T 2dwu_A 48 PRSVEEVQSFVFEMVEFLKQFPLKALVVACNTAA---AATLAALQEALSIPVI-GV-------------IHPGARAAIKV 110 (276)
T ss_dssp TSCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHH---HHHHHHHHHHCSSCEE-ES-------------HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCcHH---HHHHHHHHHHCCCCEE-ec-------------cHHHHHHHHHh
Confidence 4688999999999999999999999998653322 1357777765678975 11 22344433221
Q ss_pred CCCCceEEEEcCCCh----hhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCC-eEEeec
Q psy13907 491 NPAQLVAVGVNCLAP----HYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGV-KYVGGC 565 (698)
Q Consensus 491 ~~~~~~~iGlNC~~p----~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~-~iiGGC 565 (698)
... .-|||=.+.. ......++....+..+.-.|..+.......|.+......+.+.++++.+.+.|+ .||=||
T Consensus 111 ~~~--~rIgVlaT~~T~~s~~y~~~i~~~~~~~~v~~~~~~~~v~~ve~g~~~~~~~~~~l~~~l~~l~~~~~D~IVLGC 188 (276)
T 2dwu_A 111 TKK--GKIGVIGTVGTIQSNMYEKALHELDTYLKVHSHACPTLATVVENRLEDTAYVTQQVKQALLPLTKEDIDTLILGC 188 (276)
T ss_dssp CSS--SEEEEEECHHHHHTTHHHHHHHHHCTTCEEEEEECTTHHHHHHHSTTCHHHHHHHHHHHHHHHHTSCCSEEEECS
T ss_pred cCC--CeEEEEeChhhhhhHHHHHHHHHhCCCCEEEeeeCHHHHHHHHcCCcCCHHHHHHHHHHHHHHHhcCCCEEEECC
Confidence 112 2466655432 234556666544444544454332111122311001122346677777777773 345557
Q ss_pred CCCchHHHHHHHhcc
Q psy13907 566 CRTNADDMKNVNQVP 580 (698)
Q Consensus 566 CGTtP~hI~al~~~v 580 (698)
-+-.. ....+++.+
T Consensus 189 Th~p~-l~~~i~~~~ 202 (276)
T 2dwu_A 189 THYPL-LESYIKKEL 202 (276)
T ss_dssp TTGGG-GHHHHHHHH
T ss_pred CCHHH-HHHHHHHHc
Confidence 66544 455555544
No 271
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=35.53 E-value=64 Score=33.62 Aligned_cols=23 Identities=13% Similarity=0.209 Sum_probs=18.1
Q ss_pred HHHhCCCCEEEecccCCHHHHHH
Q psy13907 427 ALIQGGIDLLAIETLPAQEEAMV 449 (698)
Q Consensus 427 ~L~~~GvDlll~ETi~~~~Eaka 449 (698)
.|.+.|+|.+.++.-.|+.+++.
T Consensus 262 ~l~~~g~d~~~~d~~~d~~~~~~ 284 (353)
T 1j93_A 262 RLPLTGVDVVSLDWTVDMADGRR 284 (353)
T ss_dssp GGGGGCCSEEECCTTSCHHHHHH
T ss_pred HHHhcCCCEEEeCCCCCHHHHHH
Confidence 35578999999998778887664
No 272
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=35.50 E-value=2.8e+02 Score=25.96 Aligned_cols=128 Identities=16% Similarity=0.174 Sum_probs=73.8
Q ss_pred HHHHHHHhCCCCEEEecccCC-HHHHHHHHHHHHhc-CCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEE
Q psy13907 423 PRIEALIQGGIDLLAIETLPA-QEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGV 500 (698)
Q Consensus 423 ~qi~~L~~~GvDlll~ETi~~-~~Eakaa~~a~~~~-~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGl 500 (698)
+.++.+. .|+|++-+-+ |. +......++.+++. ++.|+.+.+-+.+ |. ...++.+.+ .+++.|-+
T Consensus 17 ~~~~~~~-~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~------~~--~~~~~~~~~---~Gad~v~v 83 (211)
T 3f4w_A 17 VFMDKVV-DDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLADAKIMD------GG--HFESQLLFD---AGADYVTV 83 (211)
T ss_dssp HHHHHHG-GGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEEEEEECS------CH--HHHHHHHHH---TTCSEEEE
T ss_pred HHHHHhh-cCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEEEEEecc------ch--HHHHHHHHh---cCCCEEEE
Confidence 4455564 5999987655 44 56666778888865 6899977766543 21 122444443 45566667
Q ss_pred cCCC-hhhhHHHHHHhc-CCCCEEEe-cCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEEeecCC--------Cc
Q psy13907 501 NCLA-PHYVESLLTSAG-RDVPLLCC-PNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGGCCR--------TN 569 (698)
Q Consensus 501 NC~~-p~~~~~~l~~l~-~~~pl~~y-PNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiGGCCG--------Tt 569 (698)
-+.. .+.+..+++.++ ....+++- .| +....+.++.+.+.|+.+|+=--| ++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~g~~~~v~~~~-----------------~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~ 146 (211)
T 3f4w_A 84 LGVTDVLTIQSCIRAAKEAGKQVVVDMIC-----------------VDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKP 146 (211)
T ss_dssp ETTSCHHHHHHHHHHHHHHTCEEEEECTT-----------------CSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCS
T ss_pred eCCCChhHHHHHHHHHHHcCCeEEEEecC-----------------CCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCC
Confidence 6743 355566666655 34444431 11 112345566777888887731111 25
Q ss_pred hHHHHHHHhcc
Q psy13907 570 ADDMKNVNQVP 580 (698)
Q Consensus 570 P~hI~al~~~v 580 (698)
++.++.+++.+
T Consensus 147 ~~~i~~l~~~~ 157 (211)
T 3f4w_A 147 IDDLITMLKVR 157 (211)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHc
Confidence 67777777665
No 273
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=35.41 E-value=3e+02 Score=28.11 Aligned_cols=122 Identities=16% Similarity=0.040 Sum_probs=64.1
Q ss_pred HHHHhCCCCEEEecccCCH---------------------------HHHHHHHHHHHhc-CCCeEEEEEEecCCCccCCC
Q psy13907 426 EALIQGGIDLLAIETLPAQ---------------------------EEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHG 477 (698)
Q Consensus 426 ~~L~~~GvDlll~ETi~~~---------------------------~Eakaa~~a~~~~-~~~Pv~iS~t~~~~g~l~~G 477 (698)
+.+.++|+.++..||++-- ...+..++.+++. .+.|+.+|+.-.+. +.-.
T Consensus 72 ~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~--~~i~ 149 (336)
T 1f76_A 72 DALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKD--TPVE 149 (336)
T ss_dssp HHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCCCSEEEEEECCCTT--SCGG
T ss_pred HHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhcccCCcEEEEecCCCC--Cccc
Confidence 3456789999988887521 1123344445543 24588888743221 1111
Q ss_pred CcHHHHHHHHHHhCCCCceEEEEcCCCh-----------hhhHHHHHHhc--C---------CCCEEEecCCCCCcCCCC
Q psy13907 478 DKFGLIARDVYAKNPAQLVAVGVNCLAP-----------HYVESLLTSAG--R---------DVPLLCCPNSGETFDPGQ 535 (698)
Q Consensus 478 ~~l~~~v~~~~~~~~~~~~~iGlNC~~p-----------~~~~~~l~~l~--~---------~~pl~~yPNaG~~~d~~~ 535 (698)
....+..+.+.... .+.++|-+|+..| +.+..+++.+. . +.||++.-+.+
T Consensus 150 ~~~~~~~~aa~~~~-~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~------- 221 (336)
T 1f76_A 150 QGKDDYLICMEKIY-AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD------- 221 (336)
T ss_dssp GTHHHHHHHHHHHG-GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC-------
T ss_pred ccHHHHHHHHHHHh-ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC-------
Confidence 12333333332111 2456777777333 22334444443 2 78998874331
Q ss_pred cccccCCChhhHHHHHHHHHHcCCeEEe
Q psy13907 536 RIWMNKDSVPSVDTYVPRWLDTGVKYVG 563 (698)
Q Consensus 536 g~~~~~~~p~~~a~~~~~~~~~G~~iiG 563 (698)
| +.++..+.++...+.|+..|=
T Consensus 222 --~----~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 222 --L----SEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp --C----CHHHHHHHHHHHHHTTCSEEE
T ss_pred --C----CHHHHHHHHHHHHHcCCcEEE
Confidence 2 345677777778888866543
No 274
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=35.25 E-value=2.2e+02 Score=31.07 Aligned_cols=68 Identities=22% Similarity=0.217 Sum_probs=45.8
Q ss_pred HHHHHHHHHhCCCCEEEEecC-cCHHHHHHHHHHHHhcC-CCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEE
Q psy13907 83 HRPRIEALIQGGIDLLAIETL-PAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 160 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi-~~l~Ea~aa~~a~~~~~-~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aI 160 (698)
+.++++.++++|+|.+.+-+. .+.......++.+++.. ++|+++. .+.+.+++.. +.. .++++|
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g----------~~~t~e~a~~-l~~---~G~d~I 303 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG----------NVATPEGTEA-LIK---AGADAV 303 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE----------EECSHHHHHH-HHH---TTCSEE
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC----------CcCCHHHHHH-HHH---cCCCEE
Confidence 356899999999999988543 34455666677777643 7898872 2556666643 322 578888
Q ss_pred EEcC
Q psy13907 161 GVNC 164 (698)
Q Consensus 161 GiNC 164 (698)
-+..
T Consensus 304 ~v~~ 307 (494)
T 1vrd_A 304 KVGV 307 (494)
T ss_dssp EECS
T ss_pred EEcC
Confidence 7743
No 275
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=35.21 E-value=1.6e+02 Score=31.69 Aligned_cols=43 Identities=14% Similarity=0.274 Sum_probs=31.5
Q ss_pred HHHHHHHHhCCCCEEEecccC-CHHHHHHHHHHHHhcCCCeEEE
Q psy13907 422 RPRIEALIQGGIDLLAIETLP-AQEEAMVLAELIKEYPGLKAWI 464 (698)
Q Consensus 422 ~~qi~~L~~~GvDlll~ETi~-~~~Eakaa~~a~~~~~~~Pv~i 464 (698)
.++++.++++|||+|.+.|-. +.......+..+++..+.||++
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~ 189 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIV 189 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEE
Confidence 478999999999999987544 3444556666777644788886
No 276
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=34.99 E-value=1.6e+02 Score=32.44 Aligned_cols=45 Identities=18% Similarity=0.414 Sum_probs=31.7
Q ss_pred HHHHHHHHHhCCCCEEEeccc-CCHHHHHHHHHHHHh-cCCCeEEEE
Q psy13907 421 HRPRIEALIQGGIDLLAIETL-PAQEEAMVLAELIKE-YPGLKAWIS 465 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ETi-~~~~Eakaa~~a~~~-~~~~Pv~iS 465 (698)
+.++++.|+++|+|+|.+-+- .+.......+..+++ ++++|+++.
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g 276 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGG 276 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEE
T ss_pred hHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEe
Confidence 467899999999999988643 233445556666665 447898873
No 277
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=34.68 E-value=76 Score=32.58 Aligned_cols=56 Identities=14% Similarity=0.095 Sum_probs=38.8
Q ss_pred HHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEE
Q psy13907 90 LIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGV 162 (698)
Q Consensus 90 l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGi 162 (698)
..+.|+|+|++-.| +..+++.+++.++. ..|+.+| .|-+++.+.+... .++|.|.+
T Consensus 212 A~~aGaD~I~ld~~-~~~~~k~av~~v~~--~ipi~As----------GGIt~eni~~~a~----tGvD~IsV 267 (286)
T 1x1o_A 212 ALEAGADLILLDNF-PLEALREAVRRVGG--RVPLEAS----------GNMTLERAKAAAE----AGVDYVSV 267 (286)
T ss_dssp HHHHTCSEEEEESC-CHHHHHHHHHHHTT--SSCEEEE----------SSCCHHHHHHHHH----HTCSEEEC
T ss_pred HHHcCCCEEEECCC-CHHHHHHHHHHhCC--CCeEEEE----------cCCCHHHHHHHHH----cCCCEEEE
Confidence 34579999999997 45677777776653 4677654 3667777766443 57888887
No 278
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=34.34 E-value=54 Score=33.87 Aligned_cols=62 Identities=15% Similarity=0.243 Sum_probs=39.9
Q ss_pred HHHHHhCCCCEEEEecCcCHHHHHHHHHHHHh-cCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEc
Q psy13907 87 IEALIQGGIDLLAIETLPAQEEAMVLAELIKE-YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 163 (698)
Q Consensus 87 i~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~-~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiN 163 (698)
++...+.|+|+|.+-|+ ++++++.+++.++. +++.|+.+|--+ +.+.+.+ + ...++|.||+-
T Consensus 210 ~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~I~ASGGI----------t~~ni~~-~---~~aGaD~i~vG 272 (299)
T 2jbm_A 210 AVQAAEAGADLVLLDNF-KPEELHPTATVLKAQFPSVAVEASGGI----------TLDNLPQ-F---CGPHIDVISMG 272 (299)
T ss_dssp HHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEESSC----------CTTTHHH-H---CCTTCCEEECT
T ss_pred HHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeeEEEECCC----------CHHHHHH-H---HHCCCCEEEEC
Confidence 33334589999999996 57888888887764 355788766422 2323322 2 13678888873
No 279
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=34.29 E-value=1.2e+02 Score=31.30 Aligned_cols=28 Identities=14% Similarity=0.080 Sum_probs=22.2
Q ss_pred HHHHHHhCCCCEEEecccCCHHHHHHHH
Q psy13907 424 RIEALIQGGIDLLAIETLPAQEEAMVLA 451 (698)
Q Consensus 424 qi~~L~~~GvDlll~ETi~~~~Eakaa~ 451 (698)
.+..+.+.|+|.+-++...|+.+++..+
T Consensus 244 ~l~~l~~~g~d~~~~d~~~dl~~~~~~~ 271 (338)
T 2eja_A 244 FIDLAVDYRADALSVDWSVDIPELFKIY 271 (338)
T ss_dssp HHHHHTTSCCSEEECCTTSCHHHHHHHC
T ss_pred HHHHHHHcCCCEEEeCCCCCHHHHHHhC
Confidence 4556788999999999878888877543
No 280
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=34.02 E-value=1.8e+02 Score=29.95 Aligned_cols=78 Identities=12% Similarity=-0.020 Sum_probs=52.2
Q ss_pred HHHHHhCCC-CEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcCC
Q psy13907 87 IEALIQGGI-DLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCL 165 (698)
Q Consensus 87 i~~l~~~GV-D~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC~ 165 (698)
+.+..++|. +++..+ +.+.++++..++.+++.++.|+.+.+.+.+ ..+.+.++.+.. .++++|-+++.
T Consensus 29 a~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~-------~~~~~~~~~a~~---~g~d~V~~~~g 97 (332)
T 2z6i_A 29 AGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLLS-------PFVEDIVDLVIE---EGVKVVTTGAG 97 (332)
T ss_dssp HHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTTS-------TTHHHHHHHHHH---TTCSEEEECSS
T ss_pred HHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCCC-------CCHHHHHHHHHH---CCCCEEEECCC
Confidence 444555564 666544 457888888888888767789988886532 135666665543 68999999998
Q ss_pred ChhhhHHHHH
Q psy13907 166 APHYVESLLT 175 (698)
Q Consensus 166 ~p~~i~~~l~ 175 (698)
.|..+...++
T Consensus 98 ~p~~~i~~l~ 107 (332)
T 2z6i_A 98 NPSKYMERFH 107 (332)
T ss_dssp CGGGTHHHHH
T ss_pred ChHHHHHHHH
Confidence 8866554444
No 281
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=33.90 E-value=75 Score=33.89 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhCC--CCEEEEec-----CcCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy13907 81 DYHRPRIEALIQGG--IDLLAIET-----LPAQEEAMVLAELIKEYPGLKAWIS-FSCK 131 (698)
Q Consensus 81 ~~~~~qi~~l~~~G--VD~il~ET-----i~~l~Ea~aa~~a~~~~~~~Pv~iS-ft~~ 131 (698)
+.+..+++.|.+.| +|.|-+.. .|+..+++..++.+.. .++||||| +-+.
T Consensus 212 ~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~-lGlpI~iTElDi~ 269 (379)
T 1r85_A 212 TALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAA-LGLDNQITELDVS 269 (379)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHHHH-TTCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHHHh-cCCeEEEeecccc
Confidence 55666888888888 49998863 3678899999888887 58999998 5554
No 282
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=33.66 E-value=2.3e+02 Score=29.29 Aligned_cols=144 Identities=13% Similarity=0.083 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEE-EecccC---CHHHH--------HHHHHHHHhcC---CCeEEEEEEecCCCccCCCC
Q psy13907 414 PQELIDYHRPRIEALIQGGIDLL-AIETLP---AQEEA--------MVLAELIKEYP---GLKAWISFSCKDEKHTCHGD 478 (698)
Q Consensus 414 ~del~~~y~~qi~~L~~~GvDll-l~ETi~---~~~Ea--------kaa~~a~~~~~---~~Pv~iS~t~~~~g~l~~G~ 478 (698)
.+.+.+...+.++.++++|+|.+ +++... +...- +.++..+++.. +.| ++-| |.+ .+.
T Consensus 182 l~~l~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~-ii~~-~~g-----~~~ 254 (354)
T 3cyv_A 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVP-VTLF-TKG-----GGQ 254 (354)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECC-EEEE-CTT-----TTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCC-EEEE-CCC-----HHH
Confidence 34455566677888889999987 456532 22221 22233333221 356 4444 322 122
Q ss_pred cHHHHHHHHHHhCCCCceEEEEcC-CChhhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHc
Q psy13907 479 KFGLIARDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDT 557 (698)
Q Consensus 479 ~l~~~v~~~~~~~~~~~~~iGlNC-~~p~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~ 557 (698)
.++.+.+ .+++++++-- ..+. .+.+.++.+ +.+.-|- |+. . ...+++++.+.+++.++.
T Consensus 255 ----~l~~l~~---~g~d~i~~d~~~dl~---~~~~~~g~~--~~l~Gn~----dp~---~-l~~t~e~i~~~v~~~l~~ 314 (354)
T 3cyv_A 255 ----WLEAMAE---TGCDALGLDWTTDIA---DARRRVGNK--VALQGNM----DPS---M-LYAPPARIEEEVATILAG 314 (354)
T ss_dssp ----THHHHHT---TSCSEEECCTTSCHH---HHHHHHTTT--SEEECCB----CGG---G-GGSCHHHHHHHHHHHHTT
T ss_pred ----HHHHHHh---cCCCEEEeCCCCCHH---HHHHHhCCC--eEEEecC----ChH---H-hCCCHHHHHHHHHHHHHH
Confidence 2334432 4567777653 4433 343334322 3344443 111 1 145789999999998875
Q ss_pred -CC---eEEeecCC----CchHHHHHHHhccccCC
Q psy13907 558 -GV---KYVGGCCR----TNADDMKNVNQVPVKFS 584 (698)
Q Consensus 558 -G~---~iiGGCCG----TtP~hI~al~~~v~~~~ 584 (698)
|. -|++--|| |.|++++++.++++++.
T Consensus 315 ~g~~~g~I~~~g~gi~~~~p~env~a~v~~v~~~~ 349 (354)
T 3cyv_A 315 FGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRLS 349 (354)
T ss_dssp TTTSSCEEBCBSSCCCTTSCHHHHHHHHHHHHHHH
T ss_pred hCCCCCeEEecCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 53 57776777 56899999999988653
No 283
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=33.59 E-value=2.2e+02 Score=28.78 Aligned_cols=62 Identities=21% Similarity=0.295 Sum_probs=41.2
Q ss_pred HHHHHHhCCCCEEEe--cccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEc
Q psy13907 424 RIEALIQGGIDLLAI--ETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 501 (698)
Q Consensus 424 qi~~L~~~GvDlll~--ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlN 501 (698)
|++.....|+|.+++ -+++ ..+++..+..++++ ++.+|++.+ +..++..+. + .+++.||+|
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~-~~~l~~l~~~a~~l-Gl~~lvev~-----------t~ee~~~A~-~---~Gad~IGv~ 189 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALE-QSVLVSMLDRTESL-GMTALVEVH-----------TEQEADRAL-K---AGAKVIGVN 189 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSC-HHHHHHHHHHHHHT-TCEEEEEES-----------SHHHHHHHH-H---HTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecccCC-HHHHHHHHHHHHHC-CCcEEEEcC-----------CHHHHHHHH-H---CCCCEEEEC
Confidence 455556789999987 4444 56777788888874 788887662 244443333 2 356788998
Q ss_pred C
Q psy13907 502 C 502 (698)
Q Consensus 502 C 502 (698)
=
T Consensus 190 ~ 190 (272)
T 3qja_A 190 A 190 (272)
T ss_dssp S
T ss_pred C
Confidence 5
No 284
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=33.25 E-value=2.3e+02 Score=29.40 Aligned_cols=64 Identities=16% Similarity=0.207 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhCCCCEEEEe-cCc--CHHHHHHHHHHHHhcC-CCeEEEEEEEcCCCccCCCCCHHHHHHHHH
Q psy13907 81 DYHRPRIEALIQGGIDLLAIE-TLP--AQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVY 150 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~E-Ti~--~l~Ea~aa~~a~~~~~-~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~ 150 (698)
+++.+.++.+.+.|+|.|.+= |+- ...++...++++++.. +.| ++|.+.++ .|.-+..++..+.
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~--i~~H~Hnd----~GlA~AN~laAv~ 236 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIH--FEFHGHND----YDLSVANSLQAIR 236 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSC--EEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCe--EEEEecCC----cchHHHHHHHHHH
Confidence 577778888999999998654 543 6788888999988743 444 67777776 4777777777775
No 285
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=33.10 E-value=64 Score=32.81 Aligned_cols=138 Identities=10% Similarity=0.040 Sum_probs=82.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEe-----cc-cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHH
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAI-----ET-LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIA 484 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v 484 (698)
.++++ .++..++.+++. ||.|++ |. .-+..|-+.+++.+.+ +.||++... +.+..+++
T Consensus 15 ~iD~~----~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~--rvpviaGvg---------~~~t~~ai 78 (283)
T 2pcq_A 15 RLDEE----AFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP--RKPFLVGLM---------EETLPQAE 78 (283)
T ss_dssp CBCHH----HHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC--SSCCEEEEC---------CSSHHHHH
T ss_pred CcCHH----HHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh--CCcEEEeCC---------CCCHHHHH
Confidence 46664 455667777888 888765 32 3456677777777766 789886653 34566777
Q ss_pred HHHHHhCCCCceEEEEcC---CCh---hhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcC
Q psy13907 485 RDVYAKNPAQLVAVGVNC---LAP---HYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTG 558 (698)
Q Consensus 485 ~~~~~~~~~~~~~iGlNC---~~p---~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G 558 (698)
+........+.+++.+-. ..| +.+..+.+.+..+.|+++|-+-+. .| .+.+++.+.+.+ + -
T Consensus 79 ~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~~lPiilYn~P~~-----tg---~~l~~~~~~~La----~-~ 145 (283)
T 2pcq_A 79 GALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAEKMPLFLYHVPQN-----TK---VDLPLEAVEALA----P-H 145 (283)
T ss_dssp HHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHHHSCEEEEECHHH-----HC---CCCCHHHHHHHT----T-S
T ss_pred HHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhcCCCEEEEeCccc-----cC---cCCCHHHHHHHh----c-C
Confidence 665433234667777665 234 456666665533799999976431 12 144566555443 2 2
Q ss_pred CeEEee--cCCCchHHHHHHHh
Q psy13907 559 VKYVGG--CCRTNADDMKNVNQ 578 (698)
Q Consensus 559 ~~iiGG--CCGTtP~hI~al~~ 578 (698)
-||+|= +|| ...++..+.+
T Consensus 146 pnivgiKdssg-d~~~~~~~~~ 166 (283)
T 2pcq_A 146 PNVLGIKDSSG-DLSRIAFYQA 166 (283)
T ss_dssp TTEEEEEECSC-CHHHHHHHHH
T ss_pred CCEEEEEECCC-CHHHHHHHHh
Confidence 456662 333 3566666655
No 286
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=33.01 E-value=2.8e+02 Score=32.16 Aligned_cols=97 Identities=13% Similarity=0.077 Sum_probs=56.6
Q ss_pred HHHHHHhCCCCEEEE-ecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcC---CCccCCCCCHHHHHHHHHhhCCCCceEEE
Q psy13907 86 RIEALIQGGIDLLAI-ETLPAQEEAMVLAELIKEYPGLKAWISFSCKD---EKHTCHGDKFGLIARDVYAKNPAQLVAVG 161 (698)
Q Consensus 86 qi~~l~~~GVD~il~-ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~---~g~l~~G~~~~~~~~~l~~~~~~~~~aIG 161 (698)
-++...+.|+|.|-+ =...+++.++..++.+++ .++.+...+++.. +. .+...+++.+++.+......+++.|.
T Consensus 202 ~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~-~G~~v~~~i~~~~d~~dp-~r~~~~~e~~~~~a~~l~~~Ga~~I~ 279 (718)
T 3bg3_A 202 FCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGS-AGGVVEAAISYTGDVADP-SRTKYSLQYYMGLAEELVRAGTHILC 279 (718)
T ss_dssp HHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHT-TTSEEEEEEECCSCTTCT-TCCTTCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHH-cCCeEEEEEEeeccccCC-CCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 455566679998643 355678888888888887 4555544443321 11 11223555444433222234666666
Q ss_pred EcCCChhhhHHHHHHhHhhcccccccccccccCCChHHHHHHHHHHHHc
Q psy13907 162 VNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 162 iNC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP~~~~~~~~~l~~~ 210 (698)
+-=+. |.. -|.++..+++.+.+.
T Consensus 280 l~DT~------------------------G~~--~P~~v~~lV~~lk~~ 302 (718)
T 3bg3_A 280 IKDMA------------------------GLL--KPTACTMLVSSLRDR 302 (718)
T ss_dssp EECTT------------------------SCC--CHHHHHHHHHHHHHH
T ss_pred EcCcC------------------------CCc--CHHHHHHHHHHHHHh
Confidence 54443 111 499999999999876
No 287
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=32.79 E-value=65 Score=33.34 Aligned_cols=62 Identities=6% Similarity=0.073 Sum_probs=39.2
Q ss_pred HHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 86 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 86 qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
+++..+++|+|.|.+.+|+ +++++.+++.+. ...++.+|- |-+++.+.+... .++|.|++-.
T Consensus 221 e~~eAl~aGaD~I~LDn~~-~~~l~~av~~i~--~~v~ieaSG----------GI~~~~i~~~a~----tGVD~isvG~ 282 (298)
T 3gnn_A 221 QLRTALAHGARSVLLDNFT-LDMMRDAVRVTE--GRAVLEVSG----------GVNFDTVRAIAE----TGVDRISIGA 282 (298)
T ss_dssp HHHHHHHTTCEEEEEESCC-HHHHHHHHHHHT--TSEEEEEES----------SCSTTTHHHHHH----TTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECCCC-HHHHHHHHHHhC--CCCeEEEEc----------CCCHHHHHHHHH----cCCCEEEECC
Confidence 3444456899999999965 678888887763 345555543 333333333222 5889988866
No 288
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=32.49 E-value=60 Score=33.01 Aligned_cols=53 Identities=23% Similarity=0.238 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCC
Q psy13907 80 IDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDK 141 (698)
Q Consensus 80 ~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~ 141 (698)
.+.-.++++++.++|+|.|++|-+|. ++++.+.+ + .++|++ .+ -.|.-.||+-
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~---~-l~iP~i-gI---Gag~~~dgQv 212 (264)
T 1m3u_A 160 GDQLLSDALALEAAGAQLLVLECVPV-ELAKRITE---A-LAIPVI-GI---GAGNVTDGQI 212 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHH---H-CSSCEE-EE---SSCTTSSEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHH---h-CCCCEE-Ee---CCCCCCCcce
Confidence 35556689999999999999999984 45554433 3 357865 22 2344456664
No 289
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=32.35 E-value=1.9e+02 Score=30.49 Aligned_cols=81 Identities=16% Similarity=0.072 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceE
Q psy13907 418 IDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVA 497 (698)
Q Consensus 418 ~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~ 497 (698)
.+.+.+.++.|.+.|+|+|-+=.-..- ...+..+++..+.||+...- -+..++.+.+.+ ...+.
T Consensus 241 ~~~~~~la~~l~~~Gvd~i~v~~~~~~---~~~~~~ik~~~~iPvi~~Gg----------it~e~a~~~l~~---g~aD~ 304 (362)
T 4ab4_A 241 AETFTYVARELGKRGIAFICSREREAD---DSIGPLIKEAFGGPYIVNER----------FDKASANAALAS---GKADA 304 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCT---TCCHHHHHHHHCSCEEEESS----------CCHHHHHHHHHT---TSCSE
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCCC---HHHHHHHHHHCCCCEEEeCC----------CCHHHHHHHHHc---CCccE
Confidence 345667888899999999865211100 01234445444678875532 235556555532 23455
Q ss_pred EEEcC---CChhhhHHHHHH
Q psy13907 498 VGVNC---LAPHYVESLLTS 514 (698)
Q Consensus 498 iGlNC---~~p~~~~~~l~~ 514 (698)
|++-= ..|+....+.+.
T Consensus 305 V~iGR~~lanPdl~~k~~~g 324 (362)
T 4ab4_A 305 VAFGVPFIANPDLPARLAAD 324 (362)
T ss_dssp EEESHHHHHCTTHHHHHHTT
T ss_pred EEECHHhHhCcHHHHHHHcC
Confidence 55533 356655555443
No 290
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=32.04 E-value=4.5e+02 Score=27.64 Aligned_cols=81 Identities=11% Similarity=-0.047 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhCCCCEEEecc--cCCHHH--HHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCc
Q psy13907 420 YHRPRIEALIQGGIDLLAIET--LPAQEE--AMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQL 495 (698)
Q Consensus 420 ~y~~qi~~L~~~GvDlll~ET--i~~~~E--akaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~ 495 (698)
.+.+.++.|.+.|+|+|-+=. ...... -...+..+++..+.||+.+. |-+..++.+.+.+ ...
T Consensus 256 ~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~G----------gi~~~~a~~~l~~---g~a 322 (377)
T 2r14_A 256 MAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCG----------NYDAGRAQARLDD---NTA 322 (377)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEES----------SCCHHHHHHHHHT---TSC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEEC----------CCCHHHHHHHHHC---CCc
Confidence 456778889999999986521 110000 01123445555578877543 2235566665532 335
Q ss_pred eEEEEcC---CChhhhHHHHH
Q psy13907 496 VAVGVNC---LAPHYVESLLT 513 (698)
Q Consensus 496 ~~iGlNC---~~p~~~~~~l~ 513 (698)
+.|++-= ..|+....+.+
T Consensus 323 D~V~igR~~l~~P~l~~k~~~ 343 (377)
T 2r14_A 323 DAVAFGRPFIANPDLPERFRL 343 (377)
T ss_dssp SEEEESHHHHHCTTHHHHHHH
T ss_pred eEEeecHHHHhCchHHHHHHc
Confidence 6666643 46766666544
No 291
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=31.89 E-value=2.7e+02 Score=28.85 Aligned_cols=152 Identities=14% Similarity=0.013 Sum_probs=81.9
Q ss_pred CCCCH---HHHHHHHHHHHHHHHhCCCCEEEeccc---------------------CCHHH----HHHHHHHHHhcCCCe
Q psy13907 410 DSTTP---QELIDYHRPRIEALIQGGIDLLAIETL---------------------PAQEE----AMVLAELIKEYPGLK 461 (698)
Q Consensus 410 ~~~t~---del~~~y~~qi~~L~~~GvDlll~ETi---------------------~~~~E----akaa~~a~~~~~~~P 461 (698)
+.+|. +++.+.|.+.++...++|.|.+=+=-- .++++ +..+++++++..+.|
T Consensus 132 ~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~p 211 (340)
T 3gr7_A 132 KEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGP 211 (340)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSC
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCc
Confidence 45665 455778888888889999998744321 12222 345677777655889
Q ss_pred EEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcCC---------ChhhhHHHHHHhc--CCCCEEEecCCCCC
Q psy13907 462 AWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCL---------APHYVESLLTSAG--RDVPLLCCPNSGET 530 (698)
Q Consensus 462 v~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~---------~p~~~~~~l~~l~--~~~pl~~yPNaG~~ 530 (698)
|+|-++..+ ....|.++.+.++.+......+++.|-+-.. ++..-.++++.+. .+.||++ |.|
T Consensus 212 v~vRls~~~--~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~--~Gg-- 285 (340)
T 3gr7_A 212 LFVRISASD--YHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGA--VGL-- 285 (340)
T ss_dssp EEEEEESCC--CSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEE--ESS--
T ss_pred eEEEecccc--ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEe--eCC--
Confidence 988887643 2234555554433332111244555554321 2222334444444 4566543 221
Q ss_pred cCCCCcccccCCChhhHHHHHHHHHHcC-CeEEeecCC--CchHHHHHHHhccc
Q psy13907 531 FDPGQRIWMNKDSVPSVDTYVPRWLDTG-VKYVGGCCR--TNADDMKNVNQVPV 581 (698)
Q Consensus 531 ~d~~~g~~~~~~~p~~~a~~~~~~~~~G-~~iiGGCCG--TtP~hI~al~~~v~ 581 (698)
+ .+++ .+.+.++.| +..|+=+=+ ..|+-.+.+++.+.
T Consensus 286 -------I---~s~e----~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~ 325 (340)
T 3gr7_A 286 -------I---TSGW----QAEEILQNGRADLVFLGRELLRNPYWPYAAARELG 325 (340)
T ss_dssp -------C---CCHH----HHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred -------C---CCHH----HHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCC
Confidence 1 1222 234566667 776653322 36777777776664
No 292
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=31.82 E-value=36 Score=34.95 Aligned_cols=29 Identities=17% Similarity=0.196 Sum_probs=25.4
Q ss_pred cccChHHHHHHHHHHHHHhcchhhccc-cc
Q psy13907 310 LHSNRQAVIDTHRDYVRAGCDIVTTNT-YQ 338 (698)
Q Consensus 310 ~l~~Pe~V~~iH~~yl~AGAdII~TNT-f~ 338 (698)
.|+++|+|+..-+-=++||||.|-|.| |.
T Consensus 167 ~L~d~e~i~~A~~ia~eaGADfVKTSTGf~ 196 (281)
T 2a4a_A 167 ELKTEDLIIKTTLAVLNGNADFIKTSTGKV 196 (281)
T ss_dssp HHCSHHHHHHHHHHHHTTTCSEEECCCSCS
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 458899898888999999999999998 64
No 293
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=31.78 E-value=1.8e+02 Score=29.30 Aligned_cols=149 Identities=7% Similarity=-0.053 Sum_probs=76.8
Q ss_pred CCCHHHHHHH---HHHHHHHHHhCCCCEEEecccCCHH-----HHHHHHHHHHhcC-----CCeEEEEEEecCCCccCCC
Q psy13907 411 STTPQELIDY---HRPRIEALIQGGIDLLAIETLPAQE-----EAMVLAELIKEYP-----GLKAWISFSCKDEKHTCHG 477 (698)
Q Consensus 411 ~~t~del~~~---y~~qi~~L~~~GvDlll~ETi~~~~-----Eakaa~~a~~~~~-----~~Pv~iS~t~~~~g~l~~G 477 (698)
.++++++... ..+.++.|.+.|+|+|++=+....- -.+.....+++.. +.|++ +.
T Consensus 66 ~v~~~~l~~~~~~l~~aa~~L~~~g~d~IviaCnta~~~~G~~~~~~~~~~l~~~~~~~~~~iPv~-~~----------- 133 (273)
T 2xed_A 66 TVSPEGLAAMNAQRERCVLEIADAAPEVILYACLVAVMVGGPGEHHRVESAVAEQLATGGSQALVR-SS----------- 133 (273)
T ss_dssp BCSHHHHHHHHTTHHHHHHHHHTTCCSEEEECCHHHHHTTCTTHHHHHHHHHHHHHHHTTCCCEEE-EH-----------
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCCEEEECCChHHHhcccchhHHHHHHHHHHhhccCCCCCEe-cH-----------
Confidence 4677776665 3567777889999999987644311 1123345555433 68864 11
Q ss_pred CcHHHHHHHHHHhCCCCceEEEEcCCChhhhH-HHHHHhc-CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHH
Q psy13907 478 DKFGLIARDVYAKNPAQLVAVGVNCLAPHYVE-SLLTSAG-RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWL 555 (698)
Q Consensus 478 ~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~-~~l~~l~-~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~ 555 (698)
...++.++.. .+ ..-|||=..-...+. .+.+.+. ....+......+...+...| ..+++.+.+.++++.
T Consensus 134 --~~A~~~al~~-~g--~~rvgvltp~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~g----~~~~~~l~~~~~~l~ 204 (273)
T 2xed_A 134 --AGALVEGLRA-LD--AQRVALVTPYMRPLAEKVVAYLEAEGFTISDWRALEVADNTEVG----CIPGEQVMAAARSLD 204 (273)
T ss_dssp --HHHHHHHHHH-TT--CCEEEEEECSCHHHHHHHHHHHHHTTCEEEEEEECCCCBHHHHH----TCCHHHHHHHHHHSC
T ss_pred --HHHHHHHHHH-cC--CCeEEEEcCChhhhHHHHHHHHHHCCCEEeccccCCCccchhhc----ccCHHHHHHHHHHHh
Confidence 1234455532 12 234666553333333 2223333 33433222222222111122 334667777777775
Q ss_pred HcC--CeEEeecCCCch-HHHHHHHhcc
Q psy13907 556 DTG--VKYVGGCCRTNA-DDMKNVNQVP 580 (698)
Q Consensus 556 ~~G--~~iiGGCCGTtP-~hI~al~~~v 580 (698)
+.| +-|+|-|-+-.. ..++.+.+.+
T Consensus 205 ~~gadaIvLg~CT~l~~~~~~~~le~~l 232 (273)
T 2xed_A 205 LSEVDALVISCAVQMPSLPLVETAEREF 232 (273)
T ss_dssp CTTCSEEEEESSSSSCCTTHHHHHHHHH
T ss_pred hCCCCEEEEcCCCCcchHHhHHHHHHHh
Confidence 556 434443887776 4677776665
No 294
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=31.71 E-value=64 Score=32.74 Aligned_cols=25 Identities=24% Similarity=0.210 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHHHHhcchhhccc-cc
Q psy13907 314 RQAVIDTHRDYVRAGCDIVTTNT-YQ 338 (698)
Q Consensus 314 Pe~V~~iH~~yl~AGAdII~TNT-f~ 338 (698)
++.+...-+--.+||||.|-|+| |.
T Consensus 172 ~eei~~A~~ia~eaGADfVKTSTGf~ 197 (260)
T 3r12_A 172 TEEKIAACVISKLAGAHFVKTSTGFG 197 (260)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCCSSS
T ss_pred HHHHHHHHHHHHHhCcCEEEcCCCCC
Confidence 45566677778899999999998 64
No 295
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=31.45 E-value=46 Score=33.96 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=39.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy13907 410 DSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 463 (698)
Q Consensus 410 ~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~ 463 (698)
+.-+.+++.++-.+.++.|.+.|+|++++=+.... ..++..+++..++|++
T Consensus 64 G~ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~---~~al~~lr~~~~iPvi 114 (274)
T 3uhf_A 64 GVKDKDTIIKFCLEALDFFEQFQIDMLIIACNTAS---AYALDALRAKAHFPVY 114 (274)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH---HHSHHHHHHHCSSCEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChh---HHHHHHHHHhcCCCEE
Confidence 35689999999999999999999999988543211 2346778876689975
No 296
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=31.39 E-value=78 Score=32.45 Aligned_cols=45 Identities=11% Similarity=0.099 Sum_probs=33.2
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHh-cCCCeEEEEEEe
Q psy13907 423 PRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE-YPGLKAWISFSC 468 (698)
Q Consensus 423 ~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~-~~~~Pv~iS~t~ 468 (698)
++++..++.|+|++++.+| +..+.+.++..++. ..+.++.+|.-+
T Consensus 205 eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v~ieaSGGI 250 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTVMLESSGGL 250 (284)
T ss_dssp HHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEESSC
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeEEEEECCC
Confidence 4555556689999999995 67888888888875 345677766654
No 297
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=30.92 E-value=4.4e+02 Score=26.76 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=46.0
Q ss_pred HHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCC------CccCCCC--CHHHHHHHHHhhCCCCceEE
Q psy13907 89 ALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDE------KHTCHGD--KFGLIARDVYAKNPAQLVAV 160 (698)
Q Consensus 89 ~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~------g~l~~G~--~~~~~~~~l~~~~~~~~~aI 160 (698)
.|+++|++.+-+|--. |+..-++++.+ .++||+..+=+.+. |...-|. ..+++++........|+++|
T Consensus 103 rl~kaGa~aVklEdg~---e~~~~I~al~~-agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~i 178 (275)
T 1o66_A 103 ELMAAGAHMVKLEGGV---WMAETTEFLQM-RGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVV 178 (275)
T ss_dssp HHHHTTCSEEEEECSG---GGHHHHHHHHH-TTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHcCCcEEEECCcH---HHHHHHHHHHH-cCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEE
Confidence 3556999999999753 55556666666 68999966654322 1212232 34566655443345799999
Q ss_pred EEcCCC
Q psy13907 161 GVNCLA 166 (698)
Q Consensus 161 GiNC~~ 166 (698)
=+-|..
T Consensus 179 vlE~vp 184 (275)
T 1o66_A 179 LMECVL 184 (275)
T ss_dssp EEESCC
T ss_pred EEecCC
Confidence 999975
No 298
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=30.90 E-value=4.3e+02 Score=32.38 Aligned_cols=98 Identities=14% Similarity=0.197 Sum_probs=60.7
Q ss_pred HHHHHhCCCCEE-EecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCcc----CCCCcHH---HHHHHHHHhCCCCce
Q psy13907 425 IEALIQGGIDLL-AIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHT----CHGDKFG---LIARDVYAKNPAQLV 496 (698)
Q Consensus 425 i~~L~~~GvDll-l~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l----~~G~~l~---~~v~~~~~~~~~~~~ 496 (698)
++...+.|+|.+ ++=..+++.+.+.+...+++. ..-+...++.. .+.+ .+..++. +.++.+.+ .++.
T Consensus 633 v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~-g~~~~~~i~~~-~~~~~pe~~~~~~~~~~~~~a~~~~~---~Ga~ 707 (1150)
T 3hbl_A 633 VQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEA-GKISEGTICYT-GDILNPERSNIYTLEYYVKLAKELER---EGFH 707 (1150)
T ss_dssp HHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHT-TCEEEEEEECC-SCTTCTTTCSSSSHHHHHHHHHHHHH---TTCS
T ss_pred HHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHH-hhheeEEEeec-ccccChhhcCCCCHHHHHHHHHHHHH---cCCC
Confidence 455667899998 677888898988888888874 33333222222 1111 1123444 45555543 4555
Q ss_pred EEEEcC----CChhhhHHHHHHhc--CCCCEEEecCC
Q psy13907 497 AVGVNC----LAPHYVESLLTSAG--RDVPLLCCPNS 527 (698)
Q Consensus 497 ~iGlNC----~~p~~~~~~l~~l~--~~~pl~~yPNa 527 (698)
.|.+-= ..|..+..+++.+. .+.||.+|...
T Consensus 708 ~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hn 744 (1150)
T 3hbl_A 708 ILAIKDMAGLLKPKAAYELIGELKSAVDLPIHLHTHD 744 (1150)
T ss_dssp EEEEEETTCCCCHHHHHHHHHHHHHHCCSCEEEEECB
T ss_pred eeeEcCccCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 666533 46899999988886 57788776643
No 299
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=30.86 E-value=1.2e+02 Score=33.44 Aligned_cols=66 Identities=18% Similarity=0.201 Sum_probs=43.4
Q ss_pred HHHHHHHHHhCCCCEEEEecC-cCHHHHHHHHHHHHhc-CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEE
Q psy13907 83 HRPRIEALIQGGIDLLAIETL-PAQEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 160 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi-~~l~Ea~aa~~a~~~~-~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aI 160 (698)
+.++++.+.++|+|+|.+-|- ++...+...++.+++. +++|+++.. ..+.+++.. +. ..++|+|
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~----------v~t~e~a~~-l~---~aGaD~I 295 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN----------IATAEAAKA-LA---EAGADAV 295 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHH-HH---HTTCSEE
T ss_pred hHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee----------eCcHHHHHH-HH---HcCCCEE
Confidence 356789999999999988643 3344455566666653 478998832 234444443 32 2688998
Q ss_pred EE
Q psy13907 161 GV 162 (698)
Q Consensus 161 Gi 162 (698)
-+
T Consensus 296 ~v 297 (490)
T 4avf_A 296 KV 297 (490)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 300
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=30.86 E-value=2.8e+02 Score=28.30 Aligned_cols=51 Identities=14% Similarity=0.149 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhCC--CCEEEEecC-----cCHHHHHHHHHHHHhcCCC-eEEEE-EEEc
Q psy13907 80 IDYHRPRIEALIQGG--IDLLAIETL-----PAQEEAMVLAELIKEYPGL-KAWIS-FSCK 131 (698)
Q Consensus 80 ~~~~~~qi~~l~~~G--VD~il~ETi-----~~l~Ea~aa~~a~~~~~~~-Pv~iS-ft~~ 131 (698)
.+.+...++.|.+.| +|.|-+..- +...+++..++.+.+ .++ ||||| +-+.
T Consensus 183 ~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~~l~~~a~-~G~~pi~iTEldi~ 242 (303)
T 1ta3_B 183 TQAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSSLAN-TGVSEVAITELDIA 242 (303)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEECTTCCCGGGHHHHHHHHHT-TCCSEEEEEEEEET
T ss_pred HHHHHHHHHHHHHCCCCcceEEEeeecCCCCCCHHHHHHHHHHHHH-CCCCeEEEeeCCcC
Confidence 356677888888888 599987542 234678888888877 588 99998 6554
No 301
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=30.57 E-value=1.8e+02 Score=30.51 Aligned_cols=91 Identities=8% Similarity=-0.015 Sum_probs=52.7
Q ss_pred CCCHHH---HHHHHHHHHHHHHhCCCCEEEEecC----------c-----------CHH----HHHHHHHHHHhcC--CC
Q psy13907 73 STTPQE---LIDYHRPRIEALIQGGIDLLAIETL----------P-----------AQE----EAMVLAELIKEYP--GL 122 (698)
Q Consensus 73 ~~s~ee---l~~~~~~qi~~l~~~GVD~il~ETi----------~-----------~l~----Ea~aa~~a~~~~~--~~ 122 (698)
.+|.+| +.+.|.+-++...++|.|.+=+=-- | +++ =+..+++++++.. +.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 466555 5566666666677889998754321 1 122 2455677777643 57
Q ss_pred eEEEEEEEcCCCccCCC-CCHHHHHHHHHhhCCCCceEEEEcCC
Q psy13907 123 KAWISFSCKDEKHTCHG-DKFGLIARDVYAKNPAQLVAVGVNCL 165 (698)
Q Consensus 123 Pv~iSft~~~~g~l~~G-~~~~~~~~~l~~~~~~~~~aIGiNC~ 165 (698)
|+.+-++..+. ...| .++++++..+......+++.|-+-..
T Consensus 227 pV~vRis~~~~--~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g 268 (363)
T 3l5l_A 227 PLTARFGVLEY--DGRDEQTLEESIELARRFKAGGLDLLSVSVG 268 (363)
T ss_dssp CEEEEEEEECS--SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred eEEEEecchhc--CCCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 99999887532 1234 44555544332223367887776553
No 302
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=30.44 E-value=2.8e+02 Score=27.08 Aligned_cols=88 Identities=15% Similarity=0.057 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCC-Cc-cCCCCCHHHHHHHHHhhCCCCceE
Q psy13907 82 YHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDE-KH-TCHGDKFGLIARDVYAKNPAQLVA 159 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~-g~-l~~G~~~~~~~~~l~~~~~~~~~a 159 (698)
...+++++..++|+..|-+.+ .+. ++.+|+..++|++-- .-++. +. ..=+.+++++.+.+. .|++.
T Consensus 37 ~~~~~A~a~~~~Ga~~i~~~~---~~~----i~~ir~~v~~Pvig~-~k~~~~~~~~~I~~~~~~i~~~~~----aGad~ 104 (229)
T 3q58_A 37 IVAAMAQAAASAGAVAVRIEG---IEN----LRTVRPHLSVPIIGI-IKRDLTGSPVRITPYLQDVDALAQ----AGADI 104 (229)
T ss_dssp HHHHHHHHHHHTTCSEEEEES---HHH----HHHHGGGCCSCEEEE-CBCCCSSCCCCBSCSHHHHHHHHH----HTCSE
T ss_pred hHHHHHHHHHHCCCcEEEECC---HHH----HHHHHHhcCCCEEEE-EeecCCCCceEeCccHHHHHHHHH----cCCCE
Confidence 455678888899999998754 433 345565578998632 21211 11 111234555544332 58999
Q ss_pred EEEcCC---ChhhhHHHHHHhHhhc
Q psy13907 160 VGVNCL---APHYVESLLTSAEVEG 181 (698)
Q Consensus 160 IGiNC~---~p~~i~~~l~~~~~~~ 181 (698)
|-++|+ .|+.+..+++.+++.+
T Consensus 105 I~l~~~~~~~p~~l~~~i~~~~~~g 129 (229)
T 3q58_A 105 IAFDASFRSRPVDIDSLLTRIRLHG 129 (229)
T ss_dssp EEEECCSSCCSSCHHHHHHHHHHTT
T ss_pred EEECccccCChHHHHHHHHHHHHCC
Confidence 999997 4777778888776643
No 303
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=30.39 E-value=2.5e+02 Score=29.28 Aligned_cols=49 Identities=12% Similarity=0.056 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhCC--CCEEEEecC----cCH---HHHHHHHHHHHhcCCCeEEEE-EEE
Q psy13907 81 DYHRPRIEALIQGG--IDLLAIETL----PAQ---EEAMVLAELIKEYPGLKAWIS-FSC 130 (698)
Q Consensus 81 ~~~~~qi~~l~~~G--VD~il~ETi----~~l---~Ea~aa~~a~~~~~~~Pv~iS-ft~ 130 (698)
+.+..+++.|.+.| +|.|-+..- ... .+++..++.+.+ .++||||| +-+
T Consensus 209 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~~~~~~~~~~~~l~~~a~-~G~pi~iTEldi 267 (347)
T 1xyz_A 209 NAVFNMIKSMKERGVPIDGVGFQCHFINGMSPEYLASIDQNIKRYAE-IGVIVSFTEIDI 267 (347)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCCHHHHHHHHHHHHHHHH-TTCEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEEeeecCCCCCchhHHHHHHHHHHHHh-cCCceEEEeccc
Confidence 45666788788778 599887532 122 578888887777 58999998 444
No 304
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=30.33 E-value=55 Score=33.17 Aligned_cols=51 Identities=8% Similarity=0.207 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcC-CCeEE
Q psy13907 410 DSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYP-GLKAW 463 (698)
Q Consensus 410 ~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~-~~Pv~ 463 (698)
+.-+++++.++-.+.++.|.+.|+|+|++=+.... ..++..+++.. ++||+
T Consensus 47 G~~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~---~~al~~lr~~~~~iPvi 98 (268)
T 3out_A 47 GTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTIS---AIAKDIVQEIAKAIPVI 98 (268)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHH---HHHHHHHHHHHTTSCEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChH---HHHHHHHHHhcCCCCEE
Confidence 45789999999999999999999999998543222 24667777655 78975
No 305
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=30.33 E-value=2.3e+02 Score=27.64 Aligned_cols=108 Identities=11% Similarity=0.063 Sum_probs=0.0
Q ss_pred CCcccchhhcccChHHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy13907 301 DNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAI 380 (698)
Q Consensus 301 ~~~lws~~~~l~~Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~ 380 (698)
+.+.+-|.=+.+-|+.+...-+.|.++|||+|+.+.|.. ...+... .+++.++
T Consensus 64 g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~G-~~~l~~~-------------------~~~~~~~------- 116 (228)
T 3m47_A 64 GCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPG-ADSVRAC-------------------LNVAEEM------- 116 (228)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTC-HHHHHHH-------------------HHHHHHH-------
T ss_pred CCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccCC-HHHHHHH-------------------HHHHHhc-------
Q ss_pred CCCCcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHH
Q psy13907 381 ASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELI 454 (698)
Q Consensus 381 ~~~~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~ 454 (698)
++.++|.-++.+.+ ..+...+.+...++.-.+.|+|.+.+-. ....|++.+....
T Consensus 117 -g~~v~vLt~~s~~~-----------------~~~~~~~~~~~~a~~a~~~G~~GvV~~a-t~~~e~~~ir~~~ 171 (228)
T 3m47_A 117 -GREVFLLTEMSHPG-----------------AEMFIQGAADEIARMGVDLGVKNYVGPS-TRPERLSRLREII 171 (228)
T ss_dssp -TCEEEEECCCCSGG-----------------GGTTHHHHHHHHHHHHHHTTCCEEECCS-SCHHHHHHHHHHH
T ss_pred -CCCeEEEEeCCCcc-----------------HHHHHHHHHHHHHHHHHHhCCcEEEECC-CChHHHHHHHHhc
No 306
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=30.27 E-value=2.7e+02 Score=28.80 Aligned_cols=24 Identities=13% Similarity=0.069 Sum_probs=18.3
Q ss_pred HHHHHhCCCCEEEecccCCHHHHH
Q psy13907 425 IEALIQGGIDLLAIETLPAQEEAM 448 (698)
Q Consensus 425 i~~L~~~GvDlll~ETi~~~~Eak 448 (698)
+..|.+.|+|.+-++.-.|+.+++
T Consensus 258 l~~l~~~g~d~~~~d~~~d~~~~~ 281 (359)
T 2inf_A 258 AGDWHDLPLDVVGLDWRLGIDEAR 281 (359)
T ss_dssp HHHHHTSSCSEEECCTTSCHHHHH
T ss_pred HHHHHHhCCCEEEeCCCCCHHHHH
Confidence 445678999999999777776654
No 307
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=30.04 E-value=2.9e+02 Score=27.61 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHHHHHHHHh-CCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 74 TTPQELIDYHRPRIEALIQ-GGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 74 ~s~eel~~~~~~qi~~l~~-~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
.+.+++.+.-.+.++.|.+ .|+|+|++=....- ..+++.+++..++||+
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas---~~~l~~lr~~~~iPVi 94 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTAT---AIALDDIQRSVGIPVV 94 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH---HHHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhh---HHHHHHHHHHCCCCEE
Confidence 5678999999999999998 99999996432211 1256667665578876
No 308
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=29.97 E-value=96 Score=31.80 Aligned_cols=46 Identities=17% Similarity=0.276 Sum_probs=34.6
Q ss_pred HHHHHHhCCCCEEEecccCCHHHHHHHHHHHHh-cCCCeEEEEEEecC
Q psy13907 424 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKE-YPGLKAWISFSCKD 470 (698)
Q Consensus 424 qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~-~~~~Pv~iS~t~~~ 470 (698)
|++..+++|+|++++-+ ++..+.+.++..++. .++.|+.+|.-++.
T Consensus 205 ea~eA~~aGaD~I~LDn-~~~e~l~~av~~l~~~~~~v~ieASGGIt~ 251 (285)
T 1o4u_A 205 DALRAVEAGADIVMLDN-LSPEEVKDISRRIKDINPNVIVEVSGGITE 251 (285)
T ss_dssp HHHHHHHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEEEECCCT
T ss_pred HHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCceEEEECCCCH
Confidence 33334558999999999 567888988888875 34689998887643
No 309
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=29.93 E-value=3.7e+02 Score=27.97 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhCC--CCEEEEecC-----cCHHHHHHHHHHHHhcCCCeEEEEE
Q psy13907 81 DYHRPRIEALIQGG--IDLLAIETL-----PAQEEAMVLAELIKEYPGLKAWISF 128 (698)
Q Consensus 81 ~~~~~qi~~l~~~G--VD~il~ETi-----~~l~Ea~aa~~a~~~~~~~Pv~iSf 128 (698)
+.+...++.|.+.| +|.|-++.- +...+++..++.+.. .++||+||=
T Consensus 203 ~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~~~~~~~~~~~l~~~a~-lGl~v~iTE 256 (341)
T 3niy_A 203 NFVYNMIKELKEKGVPVDGIGFQMHIDYRGLNYDSFRRNLERFAK-LGLQIYITE 256 (341)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEETTCCCHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEeeeeecCCCCCCHHHHHHHHHHHHH-cCCeEEEEe
Confidence 56677899998887 699988753 234678888888877 589999874
No 310
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=29.88 E-value=97 Score=32.19 Aligned_cols=51 Identities=16% Similarity=0.199 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhCC--CCEEEEec-----CcCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy13907 80 IDYHRPRIEALIQGG--IDLLAIET-----LPAQEEAMVLAELIKEYPGLKAWIS-FSCK 131 (698)
Q Consensus 80 ~~~~~~qi~~l~~~G--VD~il~ET-----i~~l~Ea~aa~~a~~~~~~~Pv~iS-ft~~ 131 (698)
.+.+..+++.|.+.| +|.|-+.+ .|+..+++.+++.+.+ .++||||| +-+.
T Consensus 187 ~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~-~G~pi~iTEldi~ 245 (331)
T 1n82_A 187 REKIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYAS-LGVVLHITELDVS 245 (331)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHh-cCCeEEEEeceec
Confidence 456667888887778 59998864 3678889888888887 58999998 4443
No 311
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=29.80 E-value=1.1e+02 Score=30.61 Aligned_cols=49 Identities=18% Similarity=0.215 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 74 TTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 74 ~s~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
.+.+++.+...+.++.|.+.|+|+|++=.... -..+++.+++..++||+
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa---s~~~l~~lr~~~~iPvi 93 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNTA---TAVVLEEMQKQLPIPVV 93 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHH---HHHHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchh---hHHHHHHHHHhCCCCEE
Confidence 56789999999999999999999999643221 12356666665678876
No 312
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=29.68 E-value=73 Score=32.34 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=29.7
Q ss_pred hCCCCEEEecccCCHHHHHHHHHHHHh-cCCCeEEEEEEe
Q psy13907 430 QGGIDLLAIETLPAQEEAMVLAELIKE-YPGLKAWISFSC 468 (698)
Q Consensus 430 ~~GvDlll~ETi~~~~Eakaa~~a~~~-~~~~Pv~iS~t~ 468 (698)
+.|+|++.+-| +++.+.+.++..++. +++.|+.+|.-+
T Consensus 200 ~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~i~AsGGI 238 (273)
T 2b7n_A 200 NAGADIVMCDN-LSVLETKEIAAYRDAHYPFVLLEASGNI 238 (273)
T ss_dssp HHTCSEEEEET-CCHHHHHHHHHHHHHHCTTCEEEEESSC
T ss_pred HcCCCEEEECC-CCHHHHHHHHHHhhccCCCcEEEEECCC
Confidence 46999999999 468888888887774 456888877755
No 313
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=29.62 E-value=1.3e+02 Score=32.81 Aligned_cols=156 Identities=13% Similarity=0.083 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhc-----CCCeEEEEEEecCCCccCCCCcHHHHHHHHH
Q psy13907 414 PQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEY-----PGLKAWISFSCKDEKHTCHGDKFGLIARDVY 488 (698)
Q Consensus 414 ~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~-----~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~ 488 (698)
.+.+.++-+..++.+.+ -++.+=+-.-+-...-...+..+++. .+.||+.-+-+.| =|.|...+++.+.
T Consensus 28 ~~~~~~~a~~~v~~~~~-~v~~~Kvg~~lf~~~G~~~v~~L~~~~~~~~~g~~VflDlK~~D-----IpnT~~~~a~~~~ 101 (453)
T 3qw4_B 28 AAAAVEECKRLIEQTHE-YAAAYKPNAAFFEFFGAEGWAALSEVIRAVPAGIPVVLDAKRGD-----IADTADAYATSAF 101 (453)
T ss_dssp HHHHHHHHHHHHHHHGG-GCSEEEEBHHHHHTTHHHHHHHHHHHHHTSCTTSCBEEEEEECC-----CHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhCC-cCcEEEEcHHHHHhcCHHHHHHHHHHHHhhcCCCeEEEEeecCC-----hHHHHHHHHHHHH
Confidence 56777777788887765 45665222211122233444444441 4788888777655 2445555565543
Q ss_pred HhCCCCceEEEEcC-CChhhhHHHHHHhcCCCCEEE-ecCCCCCcCCCCcccccCC-C-hhhHHHHHH-HHHHcCCeEEe
Q psy13907 489 AKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVPLLC-CPNSGETFDPGQRIWMNKD-S-VPSVDTYVP-RWLDTGVKYVG 563 (698)
Q Consensus 489 ~~~~~~~~~iGlNC-~~p~~~~~~l~~l~~~~pl~~-yPNaG~~~d~~~g~~~~~~-~-p~~~a~~~~-~~~~~G~~iiG 563 (698)
+ ..+++.+-++. .|.+.|.++++.......+.+ .-|.|... ..+-.. +. + .+..++.++ .|.+.|. .|
T Consensus 102 ~--~lg~d~vTvh~~~G~~~l~~~~~~~~~~v~vL~~tS~~~~~~-lq~~~~--~~~~~~~~V~~~a~~~~~~~g~--~G 174 (453)
T 3qw4_B 102 K--HLNAHAITASPYMGSDSLQPFMRYPDKAVFVLCKTSNKGSND-LQCLRV--GDRYLYEAVAERAEGPWNVNGN--VG 174 (453)
T ss_dssp T--TSCCSEEEECSTTCHHHHHHHHTCTTSEEEEEEECSSGGGGG-TTTSEE--TTEEHHHHHHHHHTTTTCTTSC--EE
T ss_pred H--HcCCCEEEEcccCCHHHHHHHHHhhCCcEEEEEeCCCcchHH-HHhccc--CCCCHHHHHHHHHHHHHhhcCC--eE
Confidence 2 25788999999 788888888775432222222 23332110 010001 10 1 123344444 4544553 44
Q ss_pred ecCC-CchHHHHHHHhcccc
Q psy13907 564 GCCR-TNADDMKNVNQVPVK 582 (698)
Q Consensus 564 GCCG-TtP~hI~al~~~v~~ 582 (698)
==|| |.|+.++.|++.+..
T Consensus 175 vV~gat~~~e~~~ir~~~~~ 194 (453)
T 3qw4_B 175 LVVGATDPVALARVRARAPT 194 (453)
T ss_dssp EEECTTCHHHHHHHHHHCSS
T ss_pred EEECCCCHHHHHHHHHhCCC
Confidence 4455 679999999987753
No 314
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=29.56 E-value=2.3e+02 Score=27.39 Aligned_cols=137 Identities=12% Similarity=0.097 Sum_probs=0.0
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHH-------HHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCc
Q psy13907 423 PRIEALIQGGIDLLAIETLPAQEEA-------MVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQL 495 (698)
Q Consensus 423 ~qi~~L~~~GvDlll~ETi~~~~Ea-------kaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~ 495 (698)
+.++.+.++|+|.|. +.+..-. ...+..++ ..++|+++..-+.+ ..++.+.+. .+.
T Consensus 34 ~~a~~~~~~Gad~i~---v~d~~~~~~~~~~~~~~i~~i~-~~~ipvi~~Ggi~~---------~~~~~~~~~----~Ga 96 (241)
T 1qo2_A 34 ELVEKLIEEGFTLIH---VVDLSNAIENSGENLPVLEKLS-EFAEHIQIGGGIRS---------LDYAEKLRK----LGY 96 (241)
T ss_dssp HHHHHHHHTTCCCEE---EEEHHHHHHCCCTTHHHHHHGG-GGGGGEEEESSCCS---------HHHHHHHHH----TTC
T ss_pred HHHHHHHHcCCCEEE---EecccccccCCchhHHHHHHHH-hcCCcEEEECCCCC---------HHHHHHHHH----CCC
Q ss_pred eEEEEcC---CChhhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEEee--------
Q psy13907 496 VAVGVNC---LAPHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGG-------- 564 (698)
Q Consensus 496 ~~iGlNC---~~p~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~iiGG-------- 564 (698)
+.|.+.. ..|+.+..+ +.+.....+++-+..|... ..| |. ..+.....+.+++..+.|+..|.-
T Consensus 97 d~V~lg~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~--~~g-~~-~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~ 171 (241)
T 1qo2_A 97 RRQIVSSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVA--FKG-WL-AEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGT 171 (241)
T ss_dssp CEEEECHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEEC--CTT-CS-SCSCCCHHHHHHHHHTTTCCEEEEEETTHHHH
T ss_pred CEEEECchHhhChHHHHHH-HHcCCcEEEEEEecCCEEE--ECC-ce-ecCCCCHHHHHHHHHhCCCCEEEEEeeccccc
Q ss_pred cCCCchHHHHHHHhccc
Q psy13907 565 CCRTNADDMKNVNQVPV 581 (698)
Q Consensus 565 CCGTtP~hI~al~~~v~ 581 (698)
.-|.+.+.|+.+++.++
T Consensus 172 ~~g~~~~~i~~l~~~~~ 188 (241)
T 1qo2_A 172 LQEHDFSLTKKIAIEAE 188 (241)
T ss_dssp TCCCCHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHhcC
No 315
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=29.56 E-value=99 Score=32.44 Aligned_cols=141 Identities=13% Similarity=0.165 Sum_probs=80.7
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy13907 348 LGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEA 427 (698)
Q Consensus 348 ~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~ 427 (698)
+|++-..+.||.+.++.-||.. ++ ..||--.|.= -+.+ | ...+.+++..+|.||++.
T Consensus 89 MGLDW~~a~ELIrRs~aeA~~~-----------pg--~~ia~G~GTD--qL~~-----~---~~~~l~~V~~AY~EQ~~~ 145 (396)
T 4dnh_A 89 MGLGWPEARELIRRSLAEARGR-----------PD--ALIACGAGTD--HLAP-----G---PDVSIDDILAAYESQIEA 145 (396)
T ss_dssp TTBCHHHHHHHHHHHHHHHHTS-----------SS--CCEEEEECCT--TSCC-----C---TTCCHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHhcC-----------CC--CeeeeccCcC--CCCC-----C---CCCCHHHHHHHHHHHHHH
Confidence 4777777888888776554422 11 2344444541 2322 2 235899999999999999
Q ss_pred HHhCCCCEEEecccCCHHHHHHH----------HHHHHhcCCCeEEEEEEecC-CCccC--CC-CcHHHHHHHHHH---h
Q psy13907 428 LIQGGIDLLAIETLPAQEEAMVL----------AELIKEYPGLKAWISFSCKD-EKHTC--HG-DKFGLIARDVYA---K 490 (698)
Q Consensus 428 L~~~GvDlll~ETi~~~~Eakaa----------~~a~~~~~~~Pv~iS~t~~~-~g~l~--~G-~~l~~~v~~~~~---~ 490 (698)
..+.|.-+|+.- +-.=++++ -..+++ .+.||++-.-=.- +..|. -| ..+.++.+.+.+ .
T Consensus 146 Ve~~G~~~ILMA---SRaLA~~A~~pdDY~~VY~~vL~q-~~~PVILHWLG~mFDPaL~GYWGs~d~~~A~~t~l~lI~~ 221 (396)
T 4dnh_A 146 IEAEGGRIILMA---SRALAAAAKGPEDYIRVYDRVLSQ-VKEPVIIHWLGEMFDPALEGYWGNADHMAAMKTCLDVLEA 221 (396)
T ss_dssp HHHTTCCEEECC---CHHHHHHCCSHHHHHHHHHHHHHH-CSSCEEEEEECTTTCGGGTTTTSCSSHHHHHHHHHHHHHH
T ss_pred HHHcCCeEEEeh---hHHHHHHhCCHHHHHHHHHHHHHh-cCCCEEEEecccccChhhccccCCCCHHHHHHHHHHHHHh
Confidence 999999998742 22212211 112223 4679887663110 11221 12 456666665543 2
Q ss_pred CCCCceEEEEcCCChhhhHHHHHHh
Q psy13907 491 NPAQLVAVGVNCLAPHYVESLLTSA 515 (698)
Q Consensus 491 ~~~~~~~iGlNC~~p~~~~~~l~~l 515 (698)
....+++|=|.=+..+.-..+-+.|
T Consensus 222 ~~~kVDGIKiSLLDa~~Ei~lRrrL 246 (396)
T 4dnh_A 222 HAAKVDGIKISLLSKEKEIVMRRQL 246 (396)
T ss_dssp TGGGEEEEEEESCCHHHHHHHHTSC
T ss_pred ChhhcCceEEeeeccHhHHHHHHhC
Confidence 2367888888877766544443334
No 316
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=29.54 E-value=1.7e+02 Score=29.23 Aligned_cols=65 Identities=14% Similarity=0.200 Sum_probs=47.1
Q ss_pred HHHHHHhCCCCEEEEe-cCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCC-CceEEEEc
Q psy13907 86 RIEALIQGGIDLLAIE-TLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPA-QLVAVGVN 163 (698)
Q Consensus 86 qi~~l~~~GVD~il~E-Ti~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~-~~~aIGiN 163 (698)
|+......|+|.+++= ++-+..+++..++.++++ ++-+++-+. +.+++-..+ .. +++.||+|
T Consensus 115 qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~l-Gl~~lvEv~-----------~~eE~~~A~----~l~g~~iIGin 178 (251)
T 1i4n_A 115 QVKLASSVGADAILIIARILTAEQIKEIYEAAEEL-GMDSLVEVH-----------SREDLEKVF----SVIRPKIIGIN 178 (251)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTT-TCEEEEEEC-----------SHHHHHHHH----TTCCCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHc-CCeEEEEeC-----------CHHHHHHHH----hcCCCCEEEEe
Confidence 4555667999998776 544667899999999984 788777663 345554433 36 89999999
Q ss_pred CCC
Q psy13907 164 CLA 166 (698)
Q Consensus 164 C~~ 166 (698)
=..
T Consensus 179 nr~ 181 (251)
T 1i4n_A 179 TRD 181 (251)
T ss_dssp CBC
T ss_pred Ccc
Confidence 854
No 317
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=29.44 E-value=90 Score=32.60 Aligned_cols=61 Identities=11% Similarity=0.095 Sum_probs=38.6
Q ss_pred HHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC
Q psy13907 425 IEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 502 (698)
Q Consensus 425 i~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC 502 (698)
++..+++|+|.|++.++ ++.+++.++..++ .+.++.+|.- -++. .+..+.+ .+++.|++-.
T Consensus 244 a~eAl~aGaD~I~LDn~-~~~~l~~av~~l~--~~v~ieaSGG----------It~~-~I~~~a~---tGVD~isvGa 304 (320)
T 3paj_A 244 LEEAISAGADIIMLDNF-SLEMMREAVKINA--GRAALENSGN----------ITLD-NLKECAE---TGVDYISVGA 304 (320)
T ss_dssp HHHHHHTTCSEEEEESC-CHHHHHHHHHHHT--TSSEEEEESS----------CCHH-HHHHHHT---TTCSEEECTH
T ss_pred HHHHHHcCCCEEEECCC-CHHHHHHHHHHhC--CCCeEEEECC----------CCHH-HHHHHHH---cCCCEEEECc
Confidence 33344579999999995 6888888887765 3466666553 3343 3444432 4566666543
No 318
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=29.07 E-value=3.6e+02 Score=29.45 Aligned_cols=66 Identities=15% Similarity=0.207 Sum_probs=40.9
Q ss_pred HHHHHHHHHhCCCCEEEEecC-cCHHHHHHHHHHHHhcC-CCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEE
Q psy13907 83 HRPRIEALIQGGIDLLAIETL-PAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 160 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi-~~l~Ea~aa~~a~~~~~-~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aI 160 (698)
..++++.+.++|+|++.+=+- .+.......++.+++.. ++|+++- .+ .+.+.+.. +.. .|+++|
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~-~v---------~t~~~a~~-l~~---aGad~I 321 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGG-NV---------VTAAQAKN-LID---AGVDGL 321 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEE-EE---------CSHHHHHH-HHH---HTCSEE
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEec-cc---------chHHHHHH-HHH---cCCCEE
Confidence 456788888999999987443 33444455677777643 7898862 11 33444433 322 578887
Q ss_pred EE
Q psy13907 161 GV 162 (698)
Q Consensus 161 Gi 162 (698)
-+
T Consensus 322 ~v 323 (514)
T 1jcn_A 322 RV 323 (514)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 319
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=29.02 E-value=3.3e+02 Score=28.77 Aligned_cols=66 Identities=17% Similarity=0.159 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhCCCCEEEEe-cC--cCHHHHHHHHHHHHhc-CCC-eEEEEEEEcCCCccCCCCCHHHHHHHHH
Q psy13907 81 DYHRPRIEALIQGGIDLLAIE-TL--PAQEEAMVLAELIKEY-PGL-KAWISFSCKDEKHTCHGDKFGLIARDVY 150 (698)
Q Consensus 81 ~~~~~qi~~l~~~GVD~il~E-Ti--~~l~Ea~aa~~a~~~~-~~~-Pv~iSft~~~~g~l~~G~~~~~~~~~l~ 150 (698)
+++.+.++.+.+.|+|.|.+= |+ ....++...++++++. ++. .+.+++.+.++ .|.-+..++..+.
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd----~GlAvAN~laAv~ 227 (370)
T 3rmj_A 157 DFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHND----LGLAVANSLAALK 227 (370)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCT----TSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCC----CChHHHHHHHHHH
Confidence 466777888888999988764 54 3577888999988873 221 16778988887 4777777777765
No 320
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=28.93 E-value=1.1e+02 Score=31.51 Aligned_cols=16 Identities=6% Similarity=0.086 Sum_probs=10.2
Q ss_pred HhhCceEEEecccccc
Q psy13907 272 ILENKLYLIDGGFSSQ 287 (698)
Q Consensus 272 ~~~~~~~i~dG~~gt~ 287 (698)
.+.-+...++|-+..+
T Consensus 289 ~l~~Gan~~~~~~~~~ 304 (350)
T 3t7v_A 289 RLNAGANIVTSILPPD 304 (350)
T ss_dssp HHHTTCCEEEEECCSS
T ss_pred HHhcCCceecCCCCCC
Confidence 4667777777665544
No 321
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=28.82 E-value=2.9e+02 Score=27.60 Aligned_cols=49 Identities=12% Similarity=0.200 Sum_probs=35.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 74 TTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 74 ~s~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
.+.+++.+...+.++.|.+.|+|+|++=.... -..+++.+++..++||+
T Consensus 54 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa---s~~~l~~lr~~~~iPvi 102 (273)
T 2oho_A 54 RPKKQIKEYTWELVNFLLTQNVKMIVFACNTA---TAVAWEEVKAALDIPVL 102 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHH---HHHHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchH---hHHHHHHHHHhCCCCEE
Confidence 56789999999999999999999999643222 12335666655578876
No 322
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=28.78 E-value=78 Score=32.65 Aligned_cols=39 Identities=23% Similarity=0.306 Sum_probs=30.6
Q ss_pred HhCCCCEEEecccCCHHHHHHHHHHHHh-cCCCeEEEEEEe
Q psy13907 429 IQGGIDLLAIETLPAQEEAMVLAELIKE-YPGLKAWISFSC 468 (698)
Q Consensus 429 ~~~GvDlll~ETi~~~~Eakaa~~a~~~-~~~~Pv~iS~t~ 468 (698)
.+.|+|++.+-| +++.+.+.+++.++. +++.|+.+|.-+
T Consensus 214 ~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~I~ASGGI 253 (299)
T 2jbm_A 214 AEAGADLVLLDN-FKPEELHPTATVLKAQFPSVAVEASGGI 253 (299)
T ss_dssp HHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHcCCCEEEECC-CCHHHHHHHHHHhhccCCCeeEEEECCC
Confidence 357999999999 568888888887774 556888888755
No 323
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=28.70 E-value=4.6e+02 Score=27.06 Aligned_cols=141 Identities=15% Similarity=0.156 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEE-ecccC---CHHH--------HHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHH
Q psy13907 415 QELIDYHRPRIEALIQGGIDLLA-IETLP---AQEE--------AMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGL 482 (698)
Q Consensus 415 del~~~y~~qi~~L~~~GvDlll-~ETi~---~~~E--------akaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~ 482 (698)
+.+.+.+.+-++.++++|+|.|. +++.. +..+ .+.++..+++. +.|++ -+++ . . ..
T Consensus 189 ~~i~~~~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~-g~~~i-~~~~-G-------~--~~ 256 (359)
T 2inf_A 189 SKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE-NVPLI-MFGV-G-------A--SH 256 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG-CSCEE-EECT-T-------C--GG
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHc-CCcEE-EEcC-C-------c--HH
Confidence 45556667778888899999764 55432 2222 23345555543 56754 4433 2 1 11
Q ss_pred HHHHHHHhCCCCceEEEEcC-CChhhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCC--
Q psy13907 483 IARDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGV-- 559 (698)
Q Consensus 483 ~v~~~~~~~~~~~~~iGlNC-~~p~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~-- 559 (698)
.++.+.+ .+++++++-- .. +..+.+. + + -+.+.-|-- +. . ...++++..+.+++.++.|.
T Consensus 257 ~l~~l~~---~g~d~~~~d~~~d---~~~~~~~-g-~-~~~l~Gnld----p~---~-l~~t~e~I~~~v~~~l~~~~~~ 319 (359)
T 2inf_A 257 LAGDWHD---LPLDVVGLDWRLG---IDEARSK-G-I-TKTVQGNLD----PS---I-LLAPWEVIEQKTKEILDQGMES 319 (359)
T ss_dssp GHHHHHT---SSCSEEECCTTSC---HHHHHHT-T-C-CSEEECCBC----GG---G-GGSCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHH---hCCCEEEeCCCCC---HHHHHHc-C-C-CEEEEecCC----hH---H-hcCCHHHHHHHHHHHHHhCCCC
Confidence 3444432 4566777654 33 3333333 3 2 134444431 11 1 14578899888888876432
Q ss_pred --eEEeecCC----CchHHHHHHHhccccCC
Q psy13907 560 --KYVGGCCR----TNADDMKNVNQVPVKFS 584 (698)
Q Consensus 560 --~iiGGCCG----TtP~hI~al~~~v~~~~ 584 (698)
-|++--|| |.|++|+++.++++.+.
T Consensus 320 ~g~Il~~gcgi~~~~~~enl~a~ve~v~~~~ 350 (359)
T 2inf_A 320 DGFIFNLGHGVFPDVSPEVLKKLTAFVHEYS 350 (359)
T ss_dssp SCEEBCBSSCCCTTSCHHHHHHHHHHHHHHH
T ss_pred CCeEEeCCCCCCCCcCHHHHHHHHHHHHHhh
Confidence 46776777 56799999999988653
No 324
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=28.52 E-value=1.1e+02 Score=30.21 Aligned_cols=144 Identities=10% Similarity=0.092 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCEEEec-----ccCCHHHHHHHHHHHHhcCCCeEEEEEEecC-------------CCccCCCCc----
Q psy13907 422 RPRIEALIQGGIDLLAIE-----TLPAQEEAMVLAELIKEYPGLKAWISFSCKD-------------EKHTCHGDK---- 479 (698)
Q Consensus 422 ~~qi~~L~~~GvDlll~E-----Ti~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~-------------~g~l~~G~~---- 479 (698)
.++++.+ ++|+|.+-+- .+|++...-.+++++++.+++|+-+-+-+.+ +.-+.+++.
T Consensus 16 ~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~~~~ 94 (231)
T 3ctl_A 16 KEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQ 94 (231)
T ss_dssp HHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGCTTT
T ss_pred HHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccCCcc
Q ss_pred HHHHHHHHHHhCCCCceEEEEcC-CChhhhHHHHHHhcCCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHc-
Q psy13907 480 FGLIARDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDT- 557 (698)
Q Consensus 480 l~~~v~~~~~~~~~~~~~iGlNC-~~p~~~~~~l~~l~~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~- 557 (698)
+..+++.+.+ ..--.++-+|. +..+.+.++++.+.-=.-..+.|--|... | ..+.-+--+.++++.+.
T Consensus 95 ~~~~i~~i~~--~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfggQ~------f--~~~~l~kI~~lr~~~~~~ 164 (231)
T 3ctl_A 95 AFRLIDEIRR--HDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQP------F--IPEMLDKLAELKAWRERE 164 (231)
T ss_dssp HHHHHHHHHH--TTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSSCC------C--CTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--cCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCCcc------c--cHHHHHHHHHHHHHHhcc
Q ss_pred --C--CeEEeecCCCchHHHHHHHhc
Q psy13907 558 --G--VKYVGGCCRTNADDMKNVNQV 579 (698)
Q Consensus 558 --G--~~iiGGCCGTtP~hI~al~~~ 579 (698)
+ +.+-|| .+++.++.+.++
T Consensus 165 ~~~~~I~VdGG---I~~~~~~~~~~a 187 (231)
T 3ctl_A 165 GLEYEIEVDGS---CNQATYEKLMAA 187 (231)
T ss_dssp TCCCEEEEESC---CSTTTHHHHHHH
T ss_pred CCCceEEEECC---cCHHHHHHHHHc
No 325
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=28.38 E-value=3.9e+02 Score=25.41 Aligned_cols=84 Identities=14% Similarity=0.136 Sum_probs=53.0
Q ss_pred HHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhc-CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 86 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKEY-PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 86 qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~-~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
.++.+ +.|+|++=+-+.+.+.....+++.+|+. ++.|+++-+.+.+. ....++.+.. .|++.|-+-+
T Consensus 24 ~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~--------p~~~~~~~~~---aGad~i~vh~ 91 (218)
T 3jr2_A 24 VASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDG--------GAILSRMAFE---AGADWITVSA 91 (218)
T ss_dssp HHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSC--------HHHHHHHHHH---HTCSEEEEET
T ss_pred HHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeeccc--------HHHHHHHHHh---cCCCEEEEec
Confidence 34443 5689988555556666767778888875 57898876655432 1223343322 5889998888
Q ss_pred CCh-hhhHHHHHHhHhhc
Q psy13907 165 LAP-HYVESLLTSAEVEG 181 (698)
Q Consensus 165 ~~p-~~i~~~l~~~~~~~ 181 (698)
... +.+..+++.+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~g 109 (218)
T 3jr2_A 92 AAHIATIAACKKVADELN 109 (218)
T ss_dssp TSCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 764 44667776665543
No 326
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=28.08 E-value=5.2e+02 Score=26.71 Aligned_cols=168 Identities=16% Similarity=0.109 Sum_probs=90.7
Q ss_pred CcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEec---ccCC----------HHHH---
Q psy13907 384 HVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE---TLPA----------QEEA--- 447 (698)
Q Consensus 384 ~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~E---Ti~~----------~~Ea--- 447 (698)
+.+|-|-|-+|..|+++ .| .+.+++ .++++.+++.|+|+|=+- |-|. -+|.
T Consensus 27 ~~~vMGIlNvTpDSFsd------~~---~~~~~a----l~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv 93 (314)
T 3tr9_A 27 EPAVMGIINVSPNSFYH------PH---LDLNSA----LRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRL 93 (314)
T ss_dssp SCEEEEEEECSTTCSBC------BC---CSHHHH----HHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCchhh------cc---CCHHHH----HHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHH
Confidence 35788999999888875 22 345544 456777888999998654 4442 3443
Q ss_pred HHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcCCChhhhHHHHHHhcCCCCEEEecCC
Q psy13907 448 MVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAGRDVPLLCCPNS 527 (698)
Q Consensus 448 kaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~~p~~~~~~l~~l~~~~pl~~yPNa 527 (698)
..+++++++..+.| ||+--.+ - +++++..+. +.. ..--++...-+.|.+++++. +.|+++.++.
T Consensus 94 ~pvI~~l~~~~~vp--ISIDT~~------~----~Va~aAl~a-Ga~-iINDVsg~~~~~m~~v~a~~--g~~vVlMh~~ 157 (314)
T 3tr9_A 94 LPVIDAIKKRFPQL--ISVDTSR------P----RVMREAVNT-GAD-MINDQRALQLDDALTTVSAL--KTPVCLMHFP 157 (314)
T ss_dssp HHHHHHHHHHCCSE--EEEECSC------H----HHHHHHHHH-TCC-EEEETTTTCSTTHHHHHHHH--TCCEEEECCC
T ss_pred HHHHHHHHhhCCCe--EEEeCCC------H----HHHHHHHHc-CCC-EEEECCCCCchHHHHHHHHh--CCeEEEECCC
Confidence 34555665544555 4652211 1 344444332 222 22223332223566666665 5899999999
Q ss_pred CCCcCCCCcccccCC---ChhhHHHHHHHHHHcCC---eEE---eec---CCCchHHHHHHHhccc
Q psy13907 528 GETFDPGQRIWMNKD---SVPSVDTYVPRWLDTGV---KYV---GGC---CRTNADDMKNVNQVPV 581 (698)
Q Consensus 528 G~~~d~~~g~~~~~~---~p~~~a~~~~~~~~~G~---~ii---GGC---CGTtP~hI~al~~~v~ 581 (698)
|.|.+.... -.|+. --..+.+.++...+.|+ +|+ |=- -|-|.+|=-++-+.++
T Consensus 158 G~P~tmq~~-~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l~ 222 (314)
T 3tr9_A 158 SETRKPGST-THFYFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLP 222 (314)
T ss_dssp CTTCCTTSS-CHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTTH
T ss_pred CCCcccccc-cccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHHH
Confidence 977532211 01100 01224445556677897 465 322 4567776544444443
No 327
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=28.06 E-value=3.2e+02 Score=27.32 Aligned_cols=72 Identities=14% Similarity=0.116 Sum_probs=41.4
Q ss_pred HHHHHh-cCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCC-CCceEEEEcCCChhhhHHHHHHhHhhcccccccccc
Q psy13907 113 AELIKE-YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNP-AQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNN 190 (698)
Q Consensus 113 ~~a~~~-~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~-~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~ 190 (698)
++.+++ .++.|+++++.. .++++..+.+..... .++|+|=+|++.|..-. + .
T Consensus 89 ~~~~~~~~~~~p~~v~l~~---------~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~-------g-~--------- 142 (311)
T 1ep3_A 89 LPWLNENFPELPIIANVAG---------SEEADYVAVCAKIGDAANVKAIELNISCPNVKH-------G-G--------- 142 (311)
T ss_dssp HHHHHHHCTTSCEEEEECC---------SSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGG-------T-T---------
T ss_pred HHHHHhcCCCCcEEEEEcC---------CCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCC-------c-h---------
Confidence 444554 457899999853 235544444332234 68999999987754200 0 0
Q ss_pred cccCCChHHHHHHHHHHHHc
Q psy13907 191 TLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 191 ~~~~~gP~~~~~~~~~l~~~ 210 (698)
..+-..|..+.++++++.+.
T Consensus 143 ~~~g~~~~~~~eii~~v~~~ 162 (311)
T 1ep3_A 143 QAFGTDPEVAAALVKACKAV 162 (311)
T ss_dssp EEGGGCHHHHHHHHHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHh
Confidence 01112466777888888765
No 328
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=28.02 E-value=3.5e+02 Score=27.73 Aligned_cols=76 Identities=5% Similarity=-0.112 Sum_probs=51.6
Q ss_pred HHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcCC
Q psy13907 86 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCL 165 (698)
Q Consensus 86 qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC~ 165 (698)
.+.+..++|.-.++.-.+.+.++++..++.+++..+.|+-+.+.+.+ .+..+.++.+.. .++++|-++..
T Consensus 42 la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~-------~~~~~~~~~~~~---~g~d~V~l~~g 111 (326)
T 3bo9_A 42 LAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVS-------PWADDLVKVCIE---EKVPVVTFGAG 111 (326)
T ss_dssp HHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETTS-------TTHHHHHHHHHH---TTCSEEEEESS
T ss_pred HHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEeccC-------CCHHHHHHHHHH---CCCCEEEECCC
Confidence 35555567766666666678888888888888866789988886632 235566665543 57788878877
Q ss_pred ChhhhH
Q psy13907 166 APHYVE 171 (698)
Q Consensus 166 ~p~~i~ 171 (698)
.|..+.
T Consensus 112 ~p~~~~ 117 (326)
T 3bo9_A 112 NPTKYI 117 (326)
T ss_dssp CCHHHH
T ss_pred CcHHHH
Confidence 764433
No 329
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=27.90 E-value=2e+02 Score=30.27 Aligned_cols=81 Identities=14% Similarity=0.021 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCce
Q psy13907 418 IDYHRPRIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLV 496 (698)
Q Consensus 418 ~~~y~~qi~~L~~~GvDlll~ET-i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~ 496 (698)
.+.+.+.++.|.+.|+|+|-+=. .... ..+..+++..+.||+...- -+..++.+.+.+ ...+
T Consensus 249 ~~~~~~la~~l~~~Gvd~i~v~~~~~~~----~~~~~ik~~~~iPvi~~Gg----------it~e~a~~~l~~---G~aD 311 (361)
T 3gka_A 249 AATFGHVARELGRRRIAFLFARESFGGD----AIGQQLKAAFGGPFIVNEN----------FTLDSAQAALDA---GQAD 311 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSTT----CCHHHHHHHHCSCEEEESS----------CCHHHHHHHHHT---TSCS
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCH----HHHHHHHHHcCCCEEEeCC----------CCHHHHHHHHHc---CCcc
Confidence 34566778889999999986522 1111 1234455444678775432 235555555532 2345
Q ss_pred EEEEcC---CChhhhHHHHHHh
Q psy13907 497 AVGVNC---LAPHYVESLLTSA 515 (698)
Q Consensus 497 ~iGlNC---~~p~~~~~~l~~l 515 (698)
.|++-= ..|+....+.+.+
T Consensus 312 ~V~iGR~~ladPdl~~k~~~g~ 333 (361)
T 3gka_A 312 AVAWGKLFIANPDLPRRFKLNA 333 (361)
T ss_dssp EEEESHHHHHCTTHHHHHHHTC
T ss_pred EEEECHHhHhCcHHHHHHHhCC
Confidence 555533 4676666665543
No 330
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=27.82 E-value=50 Score=33.56 Aligned_cols=80 Identities=24% Similarity=0.270 Sum_probs=47.0
Q ss_pred cEEEEecCCcCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy13907 385 VRVAGSLGSYGAFLHDGSEYRGDYI-DSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 463 (698)
Q Consensus 385 ~~VAGsiGP~~~~l~~~~ey~g~y~-~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~ 463 (698)
+-|.|=||=+..+.. -.|.|. ..-+.+ ..+.-.++++++.++|+|.+++|-++. ..++.+.+. .++|++
T Consensus 131 ipV~gHiGLtPq~v~----~~ggf~v~grt~~-~a~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~----l~iP~i 200 (264)
T 1m3u_A 131 VPVCGHLGLTPQSVN----IFGGYKVQGRGDE-AGDQLLSDALALEAAGAQLLVLECVPV-ELAKRITEA----LAIPVI 200 (264)
T ss_dssp CCEEEEEESCGGGHH----HHTSSCCCCCSHH-HHHHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHHH----CSSCEE
T ss_pred CCeEeeecCCceeec----ccCCeEEEeCCHH-HHHHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHHh----CCCCEE
Confidence 446777775543221 123343 122333 346667889999999999999999984 455543333 357854
Q ss_pred EEEEecCCCccCCCC
Q psy13907 464 ISFSCKDEKHTCHGD 478 (698)
Q Consensus 464 iS~t~~~~g~l~~G~ 478 (698)
.. ..|.-.||+
T Consensus 201 -gI---Gag~~~dgQ 211 (264)
T 1m3u_A 201 -GI---GAGNVTDGQ 211 (264)
T ss_dssp -EE---SSCTTSSEE
T ss_pred -Ee---CCCCCCCcc
Confidence 22 344456665
No 331
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=27.24 E-value=2.8e+02 Score=28.02 Aligned_cols=49 Identities=16% Similarity=0.195 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 74 TTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 74 ~s~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
.+.+++.+.-.+.++.|.+.|+|+|++=....- ..+++.+++..++||+
T Consensus 64 ~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas---~~~l~~lr~~~~iPVi 112 (286)
T 2jfq_A 64 RPGEQVKQYTVEIARKLMEFDIKMLVIACNTAT---AVALEYLQKTLSISVI 112 (286)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH---HHHHHHHHHHCSSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchh---HHHHHHHHHhCCCCEE
Confidence 567899999999999998899999996432221 1246666665578876
No 332
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=27.12 E-value=2.6e+02 Score=27.86 Aligned_cols=77 Identities=19% Similarity=0.094 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhCC-CCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEE
Q psy13907 82 YHRPRIEALIQGG-IDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 160 (698)
Q Consensus 82 ~~~~qi~~l~~~G-VD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aI 160 (698)
.|.+.++..++.| +|++=+|-...- .++.+++.+++ .+..+++|+.--+ .+.+-..+.+.+..+. ..++|.+
T Consensus 101 ~~~~ll~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~-~~~kvI~S~Hdf~--~tP~~~el~~~~~~~~---~~gaDiv 173 (257)
T 2yr1_A 101 EVRRLIEAICRSGAIDLVDYELAYGE-RIADVRRMTEE-CSVWLVVSRHYFD--GTPRKETLLADMRQAE---RYGADIA 173 (257)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHH-TTCEEEEEEEESS--CCCCHHHHHHHHHHHH---HTTCSEE
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHh-CCCEEEEEecCCC--CCcCHHHHHHHHHHHH---hcCCCEE
Confidence 3444455555566 999999965443 66777777776 5789999987432 2232222334444443 3677776
Q ss_pred EEcCC
Q psy13907 161 GVNCL 165 (698)
Q Consensus 161 GiNC~ 165 (698)
=+-+.
T Consensus 174 Kia~~ 178 (257)
T 2yr1_A 174 KVAVM 178 (257)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 66664
No 333
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=26.90 E-value=94 Score=31.96 Aligned_cols=42 Identities=10% Similarity=0.201 Sum_probs=30.1
Q ss_pred HHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEe
Q psy13907 424 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSC 468 (698)
Q Consensus 424 qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~ 468 (698)
+++..+++|+|+|++.++ +..+.+.++..++. +.++.+|.-+
T Consensus 210 ea~eAl~aGaD~I~LDn~-~~~~l~~av~~~~~--~v~ieaSGGI 251 (287)
T 3tqv_A 210 ELNQAIAAKADIVMLDNF-SGEDIDIAVSIARG--KVALEVSGNI 251 (287)
T ss_dssp HHHHHHHTTCSEEEEESC-CHHHHHHHHHHHTT--TCEEEEESSC
T ss_pred HHHHHHHcCCCEEEEcCC-CHHHHHHHHHhhcC--CceEEEECCC
Confidence 344445579999999995 56888888887763 5677766644
No 334
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=26.89 E-value=3.6e+02 Score=30.20 Aligned_cols=20 Identities=15% Similarity=0.006 Sum_probs=15.4
Q ss_pred CccEEeecCCCCceeecCee
Q psy13907 223 EAPLKAKPNRSLFETYHGVF 242 (698)
Q Consensus 223 ~~~~~~~pnag~p~~~~~~~ 242 (698)
+.|+.+|-+.|.|.....+.
T Consensus 356 ~~~vVlmH~rG~p~tm~~~~ 375 (545)
T 2bmb_A 356 EICYILSHTRGDISTMNRLA 375 (545)
T ss_dssp TSEEEEECCCSCTTTGGGCC
T ss_pred CCeEEEECCCCCCCCccccc
Confidence 57899999999998655443
No 335
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=26.88 E-value=2.1e+02 Score=29.01 Aligned_cols=49 Identities=14% Similarity=0.231 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCC--CCEEEEecC-----cCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy13907 82 YHRPRIEALIQGG--IDLLAIETL-----PAQEEAMVLAELIKEYPGLKAWIS-FSCK 131 (698)
Q Consensus 82 ~~~~qi~~l~~~G--VD~il~ETi-----~~l~Ea~aa~~a~~~~~~~Pv~iS-ft~~ 131 (698)
.+...++.+.+.| +|.|-+..- ++..+++..++.+.+ .++||||| +-+.
T Consensus 183 ~~~~~v~~l~~~G~~iDgIG~q~H~~~~~~~~~~~~~~l~~~a~-~g~pi~iTE~di~ 239 (302)
T 1nq6_A 183 AVYEMVKDFKQRGVPIDCVGFQSHFNSNSPVPSDFQANLQRFAD-LGVDVQITELDIE 239 (302)
T ss_dssp HHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHT-TTCEEEEEEEEEC
T ss_pred HHHHHHHHHHHCCCCcceEEEEEeecCCCCCHHHHHHHHHHHHh-cCCcEEEeeCCCC
Confidence 4446777777666 699998632 245667777777766 58999998 4443
No 336
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=26.87 E-value=1.3e+02 Score=29.43 Aligned_cols=85 Identities=13% Similarity=0.136 Sum_probs=50.6
Q ss_pred HHHHHHHHHhCCCCEEEEecC-----cCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCc
Q psy13907 83 HRPRIEALIQGGIDLLAIETL-----PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQL 157 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi-----~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~ 157 (698)
..+.++.+.++|+|++=+--+ |++......++.+++.+++|+-+.|-+.+. +.-++.+.+ .++
T Consensus 19 l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp-----~~~i~~~~~-------aGa 86 (230)
T 1tqj_A 19 LGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEP-----EKYVEDFAK-------AGA 86 (230)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSG-----GGTHHHHHH-------HTC
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCH-----HHHHHHHHH-------cCC
Confidence 345788888899998744422 555544567777887777899888877542 222333322 367
Q ss_pred eEEEEcCC--ChhhhHHHHHHhHh
Q psy13907 158 VAVGVNCL--APHYVESLLTSAEV 179 (698)
Q Consensus 158 ~aIGiNC~--~p~~i~~~l~~~~~ 179 (698)
++|-+=.- ..+.....++.++.
T Consensus 87 dgv~vh~e~~~~~~~~~~~~~i~~ 110 (230)
T 1tqj_A 87 DIISVHVEHNASPHLHRTLCQIRE 110 (230)
T ss_dssp SEEEEECSTTTCTTHHHHHHHHHH
T ss_pred CEEEECcccccchhHHHHHHHHHH
Confidence 77755444 33344444444443
No 337
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=26.62 E-value=4.9e+02 Score=25.93 Aligned_cols=117 Identities=13% Similarity=0.059 Sum_probs=63.3
Q ss_pred HHHHHHHHhCCCCEEEecc----cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceE
Q psy13907 422 RPRIEALIQGGIDLLAIET----LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVA 497 (698)
Q Consensus 422 ~~qi~~L~~~GvDlll~ET----i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~ 497 (698)
.++++.+++.|+|+|=+-. +....|.+-++..+++..+.|+ |+- . .+- +++++..+........
T Consensus 28 ~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~~~pi--sID--T----~~~----~v~~aAl~a~~Ga~iI 95 (262)
T 1f6y_A 28 QEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTL--CLD--S----TNI----KAIEAGLKKCKNRAMI 95 (262)
T ss_dssp HHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTCCSEE--EEE--C----SCH----HHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhCCCeE--EEe--C----CCH----HHHHHHHhhCCCCCEE
Confidence 3456667778999986653 6677788889999987556665 442 1 122 2333332211122231
Q ss_pred EEEcCCChh---hhHHHHHHhcCCCCEEEecC--CCCCcCCCCcccccCCChhhHHHHHHHHHHcCCe
Q psy13907 498 VGVNCLAPH---YVESLLTSAGRDVPLLCCPN--SGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVK 560 (698)
Q Consensus 498 iGlNC~~p~---~~~~~l~~l~~~~pl~~yPN--aG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~ 560 (698)
--+|-. .+ .|.+++++ .+.|+++.++ .|.|.+ + ...++.+.+.+....+.|+.
T Consensus 96 Ndvs~~-~d~~~~~~~~~a~--~~~~vvlmh~~~~G~p~t-----~--~~~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 96 NSTNAE-REKVEKLFPLAVE--HGAALIGLTMNKTGIPKD-----S--DTRLAFAMELVAAADEFGLP 153 (262)
T ss_dssp EEECSC-HHHHHHHHHHHHH--TTCEEEEESCCSSCSCSS-----H--HHHHHHHHHHHHHHHHHTCC
T ss_pred EECCCC-cccHHHHHHHHHH--hCCcEEEEcCCCCCCCCC-----H--HHHHHHHHHHHHHHHHCCCC
Confidence 223333 33 34444443 4689999987 454431 1 11223345555666778974
No 338
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=26.59 E-value=1.8e+02 Score=27.96 Aligned_cols=50 Identities=12% Similarity=0.234 Sum_probs=31.7
Q ss_pred HHHHHHHHHhCCCCEEEec-----ccCCHHHHHHHHHHHHhcCCCeEEEEEEecC
Q psy13907 421 HRPRIEALIQGGIDLLAIE-----TLPAQEEAMVLAELIKEYPGLKAWISFSCKD 470 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~E-----Ti~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~ 470 (698)
..+.++.+.++|+|++-+- .++++......+..+++..+.|+.+-+.+++
T Consensus 25 ~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd 79 (230)
T 1rpx_A 25 LGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVE 79 (230)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSS
T ss_pred HHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecC
Confidence 4567888999999988663 2233322234445566555678888777654
No 339
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=26.48 E-value=1.3e+02 Score=30.47 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 73 STTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 73 ~~s~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
..+.+++.+...+.++.|.+.|+|+|++=....- ..+++.+++..++||+
T Consensus 65 ~~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas---~~~l~~lr~~~~iPVi 114 (290)
T 2vvt_A 65 PRPAEQVVQFTWEMADFLLKKRIKMLVIACNTAT---AVALEEIKAALPIPVV 114 (290)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcchh---HHHHHHHHHhCCCCEE
Confidence 3567899999999999999899999996543321 2246666665578876
No 340
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=26.46 E-value=1e+02 Score=30.91 Aligned_cols=86 Identities=12% Similarity=0.141 Sum_probs=57.3
Q ss_pred HHHHHHHHhCCCCEEEE-----ecCcCHHHHHHHHHHHHhcC-CCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCc
Q psy13907 84 RPRIEALIQGGIDLLAI-----ETLPAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQL 157 (698)
Q Consensus 84 ~~qi~~l~~~GVD~il~-----ETi~~l~Ea~aa~~a~~~~~-~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~ 157 (698)
.+.++.+.++|+|++-+ -.+|++..-..+++++|+.+ ++|+-+.+-+.+. +..++.+.. .|+
T Consensus 43 ~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p---------~~~i~~~~~---aGA 110 (246)
T 3inp_A 43 GDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPV---------DALIESFAK---AGA 110 (246)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSC---------HHHHHHHHH---HTC
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCH---------HHHHHHHHH---cCC
Confidence 45677777899998887 34577766667788888765 8999998887654 223333321 467
Q ss_pred eEEEEcCCChhhhHHHHHHhHhhc
Q psy13907 158 VAVGVNCLAPHYVESLLTSAEVEG 181 (698)
Q Consensus 158 ~aIGiNC~~p~~i~~~l~~~~~~~ 181 (698)
+.|-+=+-..+.+...++.+++.+
T Consensus 111 d~itvH~Ea~~~~~~~i~~ir~~G 134 (246)
T 3inp_A 111 TSIVFHPEASEHIDRSLQLIKSFG 134 (246)
T ss_dssp SEEEECGGGCSCHHHHHHHHHTTT
T ss_pred CEEEEccccchhHHHHHHHHHHcC
Confidence 777776644445666666665554
No 341
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=26.35 E-value=99 Score=31.83 Aligned_cols=61 Identities=7% Similarity=0.100 Sum_probs=35.7
Q ss_pred HHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEc
Q psy13907 86 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 163 (698)
Q Consensus 86 qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiN 163 (698)
+++..++.|+|+|.+-+ .++++++.+++.++ ...|+.+| .|-+.+.+.+.+. .++|.|++-
T Consensus 220 e~~eA~~aGaD~I~ld~-~~~e~l~~~v~~~~--~~~~I~AS----------GGIt~~~i~~~a~----~GvD~isvG 280 (296)
T 1qap_A 220 ELDDALKAGADIIMLDN-FNTDQMREAVKRVN--GQARLEVS----------GNVTAETLREFAE----TGVDFISVG 280 (296)
T ss_dssp HHHHHHHTTCSEEEESS-CCHHHHHHHHHTTC--TTCCEEEC----------CCSCHHHHHHHHH----TTCSEEECS
T ss_pred HHHHHHHcCCCEEEECC-CCHHHHHHHHHHhC--CCCeEEEE----------CCCCHHHHHHHHH----cCCCEEEEe
Confidence 34334567888888888 45666666655433 23455433 2556666555432 577888763
No 342
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=26.30 E-value=4.2e+02 Score=26.65 Aligned_cols=164 Identities=9% Similarity=0.042 Sum_probs=81.1
Q ss_pred cEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEecccCC----HHHHHHHHHHHHhcCCC
Q psy13907 385 VRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPA----QEEAMVLAELIKEYPGL 460 (698)
Q Consensus 385 ~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~----~~Eakaa~~a~~~~~~~ 460 (698)
+.|..-+-++..+++++..| .+.+++.+ +++.+++.|+|+|=+-.-++ ...+..+++++++..+.
T Consensus 11 ~iigEilN~Tpdsf~dg~~~-------~~~~~a~~----~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~ 79 (271)
T 2yci_X 11 IMIGERINGMFKDIREAILN-------KDPRPIQE----WARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDL 79 (271)
T ss_dssp EEEEEEEETTSHHHHHHHHT-------TCCHHHHH----HHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCC
T ss_pred EEEEEecCCChhhHHHhhhh-------CCHHHHHH----HHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCC
Confidence 34444666666666654322 24455544 45556679999986665443 44555667777765567
Q ss_pred eEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcCCCh--hhhHHHHHHhcCCCCEEEecC--CCCCcCCCCc
Q psy13907 461 KAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAP--HYVESLLTSAGRDVPLLCCPN--SGETFDPGQR 536 (698)
Q Consensus 461 Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~~p--~~~~~~l~~l~~~~pl~~yPN--aG~~~d~~~g 536 (698)
|+ |+- . .+- +++++..+........--+|-..- ..|.+++++. +.++++.++ .|.|.+..
T Consensus 80 pi--sID--T----~~~----~v~~aal~a~~Ga~iINdvs~~~d~~~~~~~~~a~~--~~~vv~m~~d~~G~p~t~~-- 143 (271)
T 2yci_X 80 PC--CLD--S----TNP----DAIEAGLKVHRGHAMINSTSADQWKMDIFFPMAKKY--EAAIIGLTMNEKGVPKDAN-- 143 (271)
T ss_dssp CE--EEE--C----SCH----HHHHHHHHHCCSCCEEEEECSCHHHHHHHHHHHHHH--TCEEEEESCBTTBCCCSHH--
T ss_pred eE--EEe--C----CCH----HHHHHHHHhCCCCCEEEECCCCccccHHHHHHHHHc--CCCEEEEecCCCCCCCCHH--
Confidence 76 331 1 122 233333222112223222444321 2344444444 678999887 55443100
Q ss_pred ccccCCChhhHHHHHHHHHHcCCe---EE-ee---cCCCchHHHHHHHhcc
Q psy13907 537 IWMNKDSVPSVDTYVPRWLDTGVK---YV-GG---CCRTNADDMKNVNQVP 580 (698)
Q Consensus 537 ~~~~~~~p~~~a~~~~~~~~~G~~---ii-GG---CCGTtP~hI~al~~~v 580 (698)
+--+.+.+.+....+.|+. |+ == --|++.+|--.+-+.+
T Consensus 144 -----~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l 189 (271)
T 2yci_X 144 -----DRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETI 189 (271)
T ss_dssp -----HHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHH
Confidence 0012344455556678965 43 11 1256776644433333
No 343
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=26.30 E-value=3.9e+02 Score=27.63 Aligned_cols=92 Identities=7% Similarity=0.004 Sum_probs=56.4
Q ss_pred HHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHH---HHHHHHHHhCCCCceEEEE
Q psy13907 425 IEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFG---LIARDVYAKNPAQLVAVGV 500 (698)
Q Consensus 425 i~~L~~~GvDlll~ET-i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~---~~v~~~~~~~~~~~~~iGl 500 (698)
++...++|+|.+.+=+ ..+..+++.++.++++. ++.+..++. +. ...+.. +.++.+.+ .++..|.+
T Consensus 99 i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~-G~~v~~~~~--~a----~~~~~e~~~~ia~~~~~---~Ga~~i~l 168 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHCTEADVSKQHIEYARNL-GMDTVGFLM--MS----HMIPAEKLAEQGKLMES---YGATCIYM 168 (345)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHH-TCEEEEEEE--ST----TSSCHHHHHHHHHHHHH---HTCSEEEE
T ss_pred HHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHC-CCEEEEEEE--eC----CCCCHHHHHHHHHHHHH---CCCCEEEE
Confidence 4555667999876643 23446778888888874 566655543 32 233444 44444432 33445554
Q ss_pred cC----CChhhhHHHHHHhc--C--CCCEEEecC
Q psy13907 501 NC----LAPHYVESLLTSAG--R--DVPLLCCPN 526 (698)
Q Consensus 501 NC----~~p~~~~~~l~~l~--~--~~pl~~yPN 526 (698)
.= ..|..+..+++.+. . +.|+.++..
T Consensus 169 ~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~H 202 (345)
T 1nvm_A 169 ADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAH 202 (345)
T ss_dssp ECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECB
T ss_pred CCCcCccCHHHHHHHHHHHHHhcCCCceEEEEEC
Confidence 42 35899999998886 4 788988764
No 344
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=26.28 E-value=3.1e+02 Score=27.96 Aligned_cols=110 Identities=16% Similarity=0.142 Sum_probs=61.0
Q ss_pred hCCCCEEEecccCCHHHHHH---HHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcCCCh-
Q psy13907 430 QGGIDLLAIETLPAQEEAMV---LAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAP- 505 (698)
Q Consensus 430 ~~GvDlll~ETi~~~~Eaka---a~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC~~p- 505 (698)
++|+++++-|.+..-..... ....+....+.|+++++.-. +-+.+.++++.+. .. .++|-+||..|
T Consensus 26 ~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~g~------~~~~~~~aa~~a~---~~-~d~Iein~gcP~ 95 (318)
T 1vhn_A 26 EWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIFGS------EPNELSEAARILS---EK-YKWIDLNAGCPV 95 (318)
T ss_dssp TTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEECS------CHHHHHHHHHHHT---TT-CSEEEEEECCCC
T ss_pred HHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeCCC------CHHHHHHHHHHHH---Hh-CCEEEEECCCCc
Confidence 46899999997653322211 11111112467999998611 2233445555543 35 78899998332
Q ss_pred ----------------hhhHHHHHHhc--CCCCEEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcCCeEE
Q psy13907 506 ----------------HYVESLLTSAG--RDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYV 562 (698)
Q Consensus 506 ----------------~~~~~~l~~l~--~~~pl~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G~~ii 562 (698)
+.+..+++.+. .+.||++.-..| |. . . +..+.++.+.+.|+..|
T Consensus 96 ~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G---------~~-~--~-~~~~~a~~l~~~G~d~i 157 (318)
T 1vhn_A 96 RKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLG---------WE-K--N-EVEEIYRILVEEGVDEV 157 (318)
T ss_dssp HHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESC---------SS-S--C-CHHHHHHHHHHTTCCEE
T ss_pred HhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCC---------CC-h--H-HHHHHHHHHHHhCCCEE
Confidence 22344555554 568888876654 21 1 1 11266777778885544
No 345
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=26.26 E-value=5.5e+02 Score=29.37 Aligned_cols=122 Identities=10% Similarity=-0.034 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecCcC----------------H---HHHHHHHHHHHhcCCCeEEEEEEEcCCCccC
Q psy13907 77 QELIDYHRPRIEALIQGGIDLLAIETLPA----------------Q---EEAMVLAELIKEYPGLKAWISFSCKDEKHTC 137 (698)
Q Consensus 77 eel~~~~~~qi~~l~~~GVD~il~ETi~~----------------l---~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~ 137 (698)
..+.++|.+++ ++|+-+|+.|.+.- - ...+.+.+++++ .+.++++++.= .|+..
T Consensus 39 ~~~~~~y~~ra----~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~-~g~~i~~Ql~h--~Gr~~ 111 (729)
T 1o94_A 39 GFQSAHRSVKA----EGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVHK-YGALAGVELWY--GGAHA 111 (729)
T ss_dssp HHHHHHHHHHH----HTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHHT-TTCEEEEEEEC--CGGGS
T ss_pred HHHHHHHHHHh----cCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHHh-CCCeEEEEecC--CCccc
Confidence 37778888765 47899999995421 1 235556666776 47899998853 12211
Q ss_pred C-----------------C---C-----C-------HHHHHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhccccc
Q psy13907 138 H-----------------G---D-----K-------FGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLE 185 (698)
Q Consensus 138 ~-----------------G---~-----~-------~~~~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~ 185 (698)
+ + . + +++.++........+.|+|=|||++--.+.+.|....|.-.
T Consensus 112 ~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~--- 188 (729)
T 1o94_A 112 PNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRT--- 188 (729)
T ss_dssp CCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCC---
T ss_pred cccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCc---
Confidence 0 0 0 0 12222222111236899999999985556666555433211
Q ss_pred ccccc-cccCCChHHHHHHHHHHHHc
Q psy13907 186 LPVNN-TLISRKPIQLLSIELELAAA 210 (698)
Q Consensus 186 ~p~~~-~~~~~gP~~~~~~~~~l~~~ 210 (698)
+++ |.+..-++-++++++.+++.
T Consensus 189 --D~yGGs~enR~r~~~eiv~avr~~ 212 (729)
T 1o94_A 189 --DKYGGSLENRARFWLETLEKVKHA 212 (729)
T ss_dssp --STTSSSHHHHTHHHHHHHHHHHHH
T ss_pred --CcCCCCHHHHhHHHHHHHHHHHHH
Confidence 111 12222366778888888775
No 346
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A*
Probab=26.25 E-value=86 Score=33.18 Aligned_cols=78 Identities=12% Similarity=0.089 Sum_probs=50.8
Q ss_pred chhhcccChHHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCc
Q psy13907 306 CSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHV 385 (698)
Q Consensus 306 s~~~~l~~Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~ 385 (698)
|-.+.|..|+-.+.+++ |-+.|||+.+| |+ +..+.+ +|++.+..++ .+|.
T Consensus 56 si~lDLk~~~gr~~l~~--Lv~~ADV~ven-fr--PG~~~r-lGl~ye~L~~------------------------~nP~ 105 (360)
T 2yim_A 56 IVTADLKSDQGLELALK--LIAKADVLIEG-YR--PGVTER-LGLGPEECAK------------------------VNDR 105 (360)
T ss_dssp EEECCTTSHHHHHHHHH--HHTTCSEEEEC-SC--TTHHHH-HTCSHHHHHH------------------------HCTT
T ss_pred EEEEeCCCHHHHHHHHH--HHhhCCEEEEc-CC--cchHhh-cCCCHHHHHH------------------------hCCC
Confidence 45667888887666555 56789999999 54 333444 5885543321 1367
Q ss_pred EEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q psy13907 386 RVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYH 421 (698)
Q Consensus 386 ~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y 421 (698)
+|-.||..||. +|+|.+-..+|-+.++.
T Consensus 106 LIy~sisGfG~--------~GP~~~~pg~D~~~qA~ 133 (360)
T 2yim_A 106 LIYARMTGWGQ--------TGPRSQQAGHDINYISL 133 (360)
T ss_dssp CEEEEEESSCS--------SSTTTTSCCCHHHHHHT
T ss_pred eEEEEEecCCC--------CCCCCCCCCcHHHHHHH
Confidence 88889988874 35665555666665544
No 347
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=25.81 E-value=78 Score=33.34 Aligned_cols=65 Identities=17% Similarity=0.092 Sum_probs=34.1
Q ss_pred HHHHHHhCCCCEEEEec---------------CcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHH
Q psy13907 86 RIEALIQGGIDLLAIET---------------LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVY 150 (698)
Q Consensus 86 qi~~l~~~GVD~il~ET---------------i~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~ 150 (698)
.++.+.+.|||+|.+-- .|.+.-+..+.++.+. .++|++.+ |-..+|. ++++.+.
T Consensus 174 ~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~-~~ipvIa~------GGI~~g~---di~kAla 243 (351)
T 2c6q_A 174 MVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHG-LKGHIISD------GGCSCPG---DVAKAFG 243 (351)
T ss_dssp HHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHH-TTCEEEEE------SCCCSHH---HHHHHHH
T ss_pred HHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhh-cCCcEEEe------CCCCCHH---HHHHHHH
Confidence 45566778888886621 1222222333344444 36787753 3334444 4444442
Q ss_pred hhCCCCceEEEEcC
Q psy13907 151 AKNPAQLVAVGVNC 164 (698)
Q Consensus 151 ~~~~~~~~aIGiNC 164 (698)
+|+++|++-=
T Consensus 244 ----lGA~~V~vG~ 253 (351)
T 2c6q_A 244 ----AGADFVMLGG 253 (351)
T ss_dssp ----TTCSEEEEST
T ss_pred ----cCCCceeccH
Confidence 5788777643
No 348
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=25.79 E-value=2.9e+02 Score=27.07 Aligned_cols=113 Identities=18% Similarity=0.196 Sum_probs=0.0
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCC------eEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCce
Q psy13907 423 PRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGL------KAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLV 496 (698)
Q Consensus 423 ~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~------Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~ 496 (698)
+|++...++|+|+++-=.+. ...+++++++ ++ |++ ++-.|.+++..++. .+.+
T Consensus 76 ~~a~~ai~AGA~fivsP~~~-----~evi~~~~~~-~v~~~~~~~~~-----------PG~~TptE~~~A~~----~Gad 134 (217)
T 3lab_A 76 DDFQKAIDAGAQFIVSPGLT-----PELIEKAKQV-KLDGQWQGVFL-----------PGVATASEVMIAAQ----AGIT 134 (217)
T ss_dssp HHHHHHHHHTCSEEEESSCC-----HHHHHHHHHH-HHHCSCCCEEE-----------EEECSHHHHHHHHH----TTCC
T ss_pred HHHHHHHHcCCCEEEeCCCc-----HHHHHHHHHc-CCCccCCCeEe-----------CCCCCHHHHHHHHH----cCCC
Q ss_pred EEEEcCCChhhh--HHHHHHhcCCCC-EEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcC-CeEEeecCCCchHH
Q psy13907 497 AVGVNCLAPHYV--ESLLTSAGRDVP-LLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTG-VKYVGGCCRTNADD 572 (698)
Q Consensus 497 ~iGlNC~~p~~~--~~~l~~l~~~~p-l~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G-~~iiGGCCGTtP~h 572 (698)
.|.+ +..+.+ ..+|+.++...| +-+.|-.|...+.. .+|++.| +-.+||.-=+.++.
T Consensus 135 ~vK~--FPa~~~gG~~~lkal~~p~p~i~~~ptGGI~~~N~-----------------~~~l~aGa~~~vgGs~l~~~~~ 195 (217)
T 3lab_A 135 QLKC--FPASAIGGAKLLKAWSGPFPDIQFCPTGGISKDNY-----------------KEYLGLPNVICAGGSWLTESKL 195 (217)
T ss_dssp EEEE--TTTTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTH-----------------HHHHHSTTBCCEEESGGGCHHH
T ss_pred EEEE--CccccccCHHHHHHHHhhhcCceEEEeCCCCHHHH-----------------HHHHHCCCEEEEEChhhcChhH
Q ss_pred HHH
Q psy13907 573 MKN 575 (698)
Q Consensus 573 I~a 575 (698)
|++
T Consensus 196 i~~ 198 (217)
T 3lab_A 196 LIE 198 (217)
T ss_dssp HHH
T ss_pred Hhc
No 349
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=25.77 E-value=2.3e+02 Score=29.34 Aligned_cols=90 Identities=20% Similarity=0.203 Sum_probs=48.1
Q ss_pred hCCCCEEEecc-cCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC----CC
Q psy13907 430 QGGIDLLAIET-LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC----LA 504 (698)
Q Consensus 430 ~~GvDlll~ET-i~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC----~~ 504 (698)
+.|+|.+.+=+ ..++.++..++..+++. ++.| .|++.+.....+-+ ..+..+.+ ...++..|.+-= ..
T Consensus 98 ~~Gvd~~ri~~~~~nle~~~~~v~~ak~~-G~~v--~~~~~~~~~~~~~~---~~l~~~~~-~~~G~~~i~l~Dt~G~~~ 170 (320)
T 3dxi_A 98 IGLVDMIRIAIDPQNIDRAIVLAKAIKTM-GFEV--GFNVMYMSKWAEMN---GFLSKLKA-IDKIADLFCMVDSFGGIT 170 (320)
T ss_dssp TTTCSEEEEEECGGGHHHHHHHHHHHHTT-TCEE--EEEECCTTTGGGST---TSGGGGGG-GTTTCSEEEEECTTSCCC
T ss_pred hcCCCEEEEEecHHHHHHHHHHHHHHHHC-CCEE--EEEEEeCCCCCCHH---HHHHHHHH-hhCCCCEEEECcccCCCC
Confidence 47999986654 23345555566666653 5665 44443311111111 11111211 123455565544 35
Q ss_pred hhhhHHHHHHhc--CCCCEEEecC
Q psy13907 505 PHYVESLLTSAG--RDVPLLCCPN 526 (698)
Q Consensus 505 p~~~~~~l~~l~--~~~pl~~yPN 526 (698)
|..+..+++.+. .+.|+.++..
T Consensus 171 P~~~~~lv~~l~~~~~~~i~~H~H 194 (320)
T 3dxi_A 171 PKEVKNLLKEVRKYTHVPVGFHGH 194 (320)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEECB
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeC
Confidence 888888888886 5678877653
No 350
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=25.71 E-value=1.3e+02 Score=31.93 Aligned_cols=51 Identities=22% Similarity=0.228 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhCC--CCEEEec-----ccCCHHHHHHHHHHHHhcCCCeEEEE-EEec
Q psy13907 418 IDYHRPRIEALIQGG--IDLLAIE-----TLPAQEEAMVLAELIKEYPGLKAWIS-FSCK 469 (698)
Q Consensus 418 ~~~y~~qi~~L~~~G--vDlll~E-----Ti~~~~Eakaa~~a~~~~~~~Pv~iS-~t~~ 469 (698)
.+.+.+.++.|.+.| +|.|-+. ..++..+.+.+++.+.. .++||+|+ +.+.
T Consensus 208 ~~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~-~Gl~i~iTElDi~ 266 (378)
T 1ur1_A 208 REATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAK-LGLRVHFTSLDVD 266 (378)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHT-TTCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHHHHh-cCCeEEEEecccC
Confidence 466778899998888 5999886 45788999999888887 48999998 4554
No 351
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=25.61 E-value=3.1e+02 Score=29.16 Aligned_cols=75 Identities=13% Similarity=0.014 Sum_probs=43.5
Q ss_pred HHHHhCCCCEEEEecCcCHHHHHHHHHHHHhc-CCCeEEEEEEEcCC---------C--ccCCCCCHHHHHHHHHhh-CC
Q psy13907 88 EALIQGGIDLLAIETLPAQEEAMVLAELIKEY-PGLKAWISFSCKDE---------K--HTCHGDKFGLIARDVYAK-NP 154 (698)
Q Consensus 88 ~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~-~~~Pv~iSft~~~~---------g--~l~~G~~~~~~~~~l~~~-~~ 154 (698)
+..++.|++.+ |+.+.+|++.+-+++++. ...++++-+....+ | ..+.|.+.+++.+.+... ..
T Consensus 118 ~~a~~~gv~~i---~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~~~~~~ 194 (425)
T 2qgh_A 118 EQALKLNILFL---NVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKS 194 (425)
T ss_dssp HHHHHTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHHHC
T ss_pred HHHHHCCCCEE---EeCCHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHHhC
Confidence 33445688755 566777777777666652 23466666654311 1 345788877665543211 23
Q ss_pred CCceEEEEcCC
Q psy13907 155 AQLVAVGVNCL 165 (698)
Q Consensus 155 ~~~~aIGiNC~ 165 (698)
.++...|+-|-
T Consensus 195 ~~l~l~Gl~~H 205 (425)
T 2qgh_A 195 AFLEPVSVHFH 205 (425)
T ss_dssp SSEEEEEEECC
T ss_pred CCccEEEEEEE
Confidence 46777888774
No 352
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=25.51 E-value=1e+02 Score=31.93 Aligned_cols=41 Identities=5% Similarity=0.014 Sum_probs=28.8
Q ss_pred HHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEe
Q psy13907 425 IEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSC 468 (698)
Q Consensus 425 i~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~ 468 (698)
++..+++|+|.+++.++ ++.+++.++..+. .+.++.+|.-+
T Consensus 222 ~~eAl~aGaD~I~LDn~-~~~~l~~av~~i~--~~v~ieaSGGI 262 (298)
T 3gnn_A 222 LRTALAHGARSVLLDNF-TLDMMRDAVRVTE--GRAVLEVSGGV 262 (298)
T ss_dssp HHHHHHTTCEEEEEESC-CHHHHHHHHHHHT--TSEEEEEESSC
T ss_pred HHHHHHcCCCEEEECCC-CHHHHHHHHHHhC--CCCeEEEEcCC
Confidence 44445579999999994 5788888887663 35566666544
No 353
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=25.49 E-value=97 Score=30.79 Aligned_cols=49 Identities=14% Similarity=0.254 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 74 TTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 74 ~s~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
.+.+++.+...+.++.|.+.|+|+|++=....- ..+++.+++..++||+
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~---~~~~~~lr~~~~iPvi 90 (255)
T 2jfz_A 42 KDPTTIKQFGLEALDFFKPHEIELLIVACNTAS---ALALEEMQKYSKIPIV 90 (255)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHH---HHTHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhCCCCEE
Confidence 567899999999999999899999996532221 1245666655578876
No 354
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=25.23 E-value=4.8e+02 Score=26.29 Aligned_cols=63 Identities=19% Similarity=0.159 Sum_probs=43.3
Q ss_pred HHHHHHhCCCCEEEec-ccCCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC
Q psy13907 424 RIEALIQGGIDLLAIE-TLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 502 (698)
Q Consensus 424 qi~~L~~~GvDlll~E-Ti~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC 502 (698)
|+......|+|.+++= +.-+..+++..+..++++ ++-+++... +..++-.++ ..++..||+|=
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~l-Gl~~lvevh-----------~~eEl~~A~----~~ga~iIGinn 197 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFAL-GMDALIEVH-----------DEAEMERAL----KLSSRLLGVNN 197 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHT-TCEEEEEEC-----------SHHHHHHHT----TSCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHc-CCeEEEEeC-----------CHHHHHHHH----hcCCCEEEECC
Confidence 5666778999997765 455667888888888885 677666552 344443333 35677899994
No 355
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=25.02 E-value=2.6e+02 Score=29.38 Aligned_cols=67 Identities=13% Similarity=0.097 Sum_probs=44.5
Q ss_pred HHHHHHH-hCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEc
Q psy13907 85 PRIEALI-QGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVN 163 (698)
Q Consensus 85 ~qi~~l~-~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiN 163 (698)
+.+.++. ++|+.++ ....+.++....++.+++..++|+.+.+.+.+ .+.++.+.+ .++++|=+|
T Consensus 60 ~lA~avA~~GGlgii--~~~~s~e~~~~~I~~vk~~~~~pvga~ig~~~----------~e~a~~l~e---aGad~I~ld 124 (361)
T 3khj_A 60 LMAVGMARLGGIGII--HKNMDMESQVNEVLKVKNSGGLRVGAAIGVNE----------IERAKLLVE---AGVDVIVLD 124 (361)
T ss_dssp HHHHHHHHTTCEEEE--CSSSCHHHHHHHHHHHHHTTCCCCEEEECTTC----------HHHHHHHHH---TTCSEEEEC
T ss_pred HHHHHHHHcCCCeEE--ecCCCHHHHHHHHHHHHhccCceEEEEeCCCH----------HHHHHHHHH---cCcCeEEEe
Confidence 3444444 4566655 35667888888888888766789888874421 344444432 589999999
Q ss_pred CCC
Q psy13907 164 CLA 166 (698)
Q Consensus 164 C~~ 166 (698)
+++
T Consensus 125 ~a~ 127 (361)
T 3khj_A 125 SAH 127 (361)
T ss_dssp CSC
T ss_pred CCC
Confidence 876
No 356
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=24.73 E-value=1.5e+02 Score=30.27 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhCC--CCEEEEec---CcCHHHHHHHHHHHHhcCCC-eEEEE-EEEc
Q psy13907 80 IDYHRPRIEALIQGG--IDLLAIET---LPAQEEAMVLAELIKEYPGL-KAWIS-FSCK 131 (698)
Q Consensus 80 ~~~~~~qi~~l~~~G--VD~il~ET---i~~l~Ea~aa~~a~~~~~~~-Pv~iS-ft~~ 131 (698)
.+.+...++.|.+.| +|.|-++. .....+++..++.+.+ .++ ||||| +-+.
T Consensus 184 ~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a~-~G~~pi~iTEldi~ 241 (303)
T 1i1w_A 184 TQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLAS-AGTPEVAITELDVA 241 (303)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHHT-TCCSEEEEEEEEET
T ss_pred HHHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHHH-CCCCeEEEEeCCcc
Confidence 356667888887788 59999876 3455777777777776 588 99998 5554
No 357
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=24.60 E-value=1.2e+02 Score=31.57 Aligned_cols=48 Identities=10% Similarity=0.130 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhCC--CCEEEEec-----CcCHHHHHHHHHHHHhcCCCeEEEEE
Q psy13907 80 IDYHRPRIEALIQGG--IDLLAIET-----LPAQEEAMVLAELIKEYPGLKAWISF 128 (698)
Q Consensus 80 ~~~~~~qi~~l~~~G--VD~il~ET-----i~~l~Ea~aa~~a~~~~~~~Pv~iSf 128 (698)
.+.+..+++.|.+.| +|.|-+.. .|+..+++.+++.+.. .++||+||=
T Consensus 186 ~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~-lGl~v~iTE 240 (331)
T 3emz_A 186 REKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYAS-LDVQLHVTE 240 (331)
T ss_dssp HHHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHT-TSCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHH-cCCcEEEee
Confidence 345667888888777 69998874 3678899999988887 589999863
No 358
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=24.43 E-value=5.1e+02 Score=27.87 Aligned_cols=63 Identities=11% Similarity=0.035 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCCCCEEEec-cc--CCHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHH
Q psy13907 420 YHRPRIEALIQGGIDLLAIE-TL--PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVY 488 (698)
Q Consensus 420 ~y~~qi~~L~~~GvDlll~E-Ti--~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~ 488 (698)
++.+.++.+.+.|+|.|-+= |+ ....++...+..+++..+ +.|++-+.+ -.|..+..++.++.
T Consensus 181 ~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~--~~i~~H~Hn----d~GlAvAN~laAv~ 246 (423)
T 3ivs_A 181 DLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVS--CDIECHFHN----DTGMAIANAYCALE 246 (423)
T ss_dssp HHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS--SEEEEEEBC----TTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcC--CeEEEEECC----CCchHHHHHHHHHH
Confidence 35677778888999987543 43 456678888888886444 456888877 46777777776664
No 359
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=24.38 E-value=4.2e+02 Score=27.56 Aligned_cols=89 Identities=10% Similarity=0.143 Sum_probs=55.3
Q ss_pred CCCHHH---HHHHHHHHHHHHHhCCCCEEEEec----------Cc-----------CH----HHHHHHHHHHHhcC--CC
Q psy13907 73 STTPQE---LIDYHRPRIEALIQGGIDLLAIET----------LP-----------AQ----EEAMVLAELIKEYP--GL 122 (698)
Q Consensus 73 ~~s~ee---l~~~~~~qi~~l~~~GVD~il~ET----------i~-----------~l----~Ea~aa~~a~~~~~--~~ 122 (698)
.+|.+| +.+.|.+-++...++|.|.|=+=- -| ++ .=+..+++++++.. +.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 466555 556666666667788999875541 01 11 22456777777653 67
Q ss_pred eEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 123 KAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 123 Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
|+++-++..+ ...+|.++++++..+...... ++.|=+-.
T Consensus 212 pv~vRls~~~--~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~ 250 (343)
T 3kru_A 212 PIFVRVSADD--YMEGGINIDMMVEYINMIKDK-VDLIDVSS 250 (343)
T ss_dssp CEEEEEECCC--SSTTSCCHHHHHHHHHHHTTT-CSEEEEEC
T ss_pred CeEEEeechh--hhccCccHHHHHHHHHHhhcc-ccEEeccC
Confidence 9998887643 233577888777655444455 88776643
No 360
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=24.35 E-value=2e+02 Score=34.68 Aligned_cols=65 Identities=17% Similarity=0.116 Sum_probs=38.8
Q ss_pred CCCeEEEEEEEcCCCccCCCCCHH---HHHHHHHhhCCCCceEEEEcCCChhhhHHHHHHhHhhccccccccccc-ccCC
Q psy13907 120 PGLKAWISFSCKDEKHTCHGDKFG---LIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVEGQSLELPVNNT-LISR 195 (698)
Q Consensus 120 ~~~Pv~iSft~~~~g~l~~G~~~~---~~~~~l~~~~~~~~~aIGiNC~~p~~i~~~l~~~~~~~~~~~~p~~~~-~~~~ 195 (698)
++.|+|+++.+ |.+.+ ++++.+. ..++|+|-+|++.|..+. . + ..| .+-.
T Consensus 633 ~~~~~i~~i~~--------g~~~~~~~~~a~~~~---~~g~d~iein~~~P~~~~-----~-~---------~~G~~~~~ 686 (1025)
T 1gte_A 633 PDNIVIASIMC--------SYNKNDWMELSRKAE---ASGADALELNLSCPHGMG-----E-R---------GMGLACGQ 686 (1025)
T ss_dssp TTSEEEEEECC--------CSCHHHHHHHHHHHH---HTTCSEEEEECCCBCCCC--------------------SBGGG
T ss_pred CCCCeEEEecC--------CCCHHHHHHHHHHHH---hcCCCEEEEECCCCCCCC-----C-C---------Cccccccc
Confidence 47899998854 33333 4444442 368999999998864210 0 0 001 1123
Q ss_pred ChHHHHHHHHHHHHc
Q psy13907 196 KPIQLLSIELELAAA 210 (698)
Q Consensus 196 gP~~~~~~~~~l~~~ 210 (698)
.|..+.++++++.+.
T Consensus 687 ~~~~~~~iv~~v~~~ 701 (1025)
T 1gte_A 687 DPELVRNICRWVRQA 701 (1025)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 578888888888776
No 361
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=24.10 E-value=3.7e+02 Score=28.36 Aligned_cols=44 Identities=23% Similarity=0.305 Sum_probs=31.5
Q ss_pred HHHHHHHHHhCCCCEEEecc-cCCHHHHHHHHHHHHhcC-CCeEEE
Q psy13907 421 HRPRIEALIQGGIDLLAIET-LPAQEEAMVLAELIKEYP-GLKAWI 464 (698)
Q Consensus 421 y~~qi~~L~~~GvDlll~ET-i~~~~Eakaa~~a~~~~~-~~Pv~i 464 (698)
+.++++.+.++|+|.+.+-+ ..+.......+..+++.. ++|+++
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv 199 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIA 199 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEE
Confidence 35667778899999998743 334455666777777654 789987
No 362
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A*
Probab=24.07 E-value=1.7e+02 Score=32.53 Aligned_cols=51 Identities=12% Similarity=0.126 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhCC-CCEEEEec--------CcCHHHHHHHHHHHHhcCCCeEEEE-EEEc
Q psy13907 80 IDYHRPRIEALIQGG-IDLLAIET--------LPAQEEAMVLAELIKEYPGLKAWIS-FSCK 131 (698)
Q Consensus 80 ~~~~~~qi~~l~~~G-VD~il~ET--------i~~l~Ea~aa~~a~~~~~~~Pv~iS-ft~~ 131 (698)
.+.+...++.|.+.| +|.|-+.. +++..+++.+++.+.+ .++||+|| +-+.
T Consensus 393 ~~~~~~lv~~l~~~gvIdgiG~Q~H~~~~~~~~~~~~~~~~~l~~~a~-~Gl~i~iTElDi~ 453 (540)
T 2w5f_A 393 RDCIASICANLYNKGLLDGVGMQSHINADMNGFSGIQNYKAALQKYIN-IGCDVQITELDIS 453 (540)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCEEESCSSSTTCHHHHHHHHHHHHT-TTSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCcccEEEEeeEecCCCCCCCCHHHHHHHHHHHHh-cCCcEEEEeeeec
Confidence 344556778887777 68776543 3578889998888877 58999998 5554
No 363
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=24.02 E-value=97 Score=30.96 Aligned_cols=25 Identities=24% Similarity=0.461 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHHHHhcchhhccc-cc
Q psy13907 314 RQAVIDTHRDYVRAGCDIVTTNT-YQ 338 (698)
Q Consensus 314 Pe~V~~iH~~yl~AGAdII~TNT-f~ 338 (698)
++.+...-+--.+||||.|-|.| |.
T Consensus 156 ~eei~~a~~ia~~aGADfVKTSTGf~ 181 (239)
T 3ngj_A 156 NEEKVEVCKRCVAAGAEYVKTSTGFG 181 (239)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred HHHHHHHHHHHHHHCcCEEECCCCCC
Confidence 44566677778899999999998 74
No 364
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=23.94 E-value=1.3e+02 Score=29.83 Aligned_cols=50 Identities=14% Similarity=0.259 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 463 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~ 463 (698)
.-+.+++.+...+.++.|.+.|+|++++=+.... ..++..+++..++||+
T Consensus 41 ~~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~---~~~~~~lr~~~~iPvi 90 (255)
T 2jfz_A 41 TKDPTTIKQFGLEALDFFKPHEIELLIVACNTAS---ALALEEMQKYSKIPIV 90 (255)
T ss_dssp TSCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHH---HHTHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhCCCCEE
Confidence 4579999999999999999999999987653332 1257778766688975
No 365
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=23.92 E-value=1.5e+02 Score=32.84 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=40.0
Q ss_pred HHHHHHhCCCCEEEEe----c-----------CcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHH
Q psy13907 86 RIEALIQGGIDLLAIE----T-----------LPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVY 150 (698)
Q Consensus 86 qi~~l~~~GVD~il~E----T-----------i~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~ 150 (698)
.++.+.+.|||.|.+- + .|.+..+..+.+++++ .++|++++.=+ .+ ..++++.+.
T Consensus 310 ~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~-~~iPVIa~GGI------~~---~~di~kala 379 (511)
T 3usb_A 310 ATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARK-HGIPVIADGGI------KY---SGDMVKALA 379 (511)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHT-TTCCEEEESCC------CS---HHHHHHHHH
T ss_pred HHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHh-CCCcEEEeCCC------CC---HHHHHHHHH
Confidence 3566778899999751 1 4555555566666666 47899876422 22 445555443
Q ss_pred hhCCCCceEEEEcC
Q psy13907 151 AKNPAQLVAVGVNC 164 (698)
Q Consensus 151 ~~~~~~~~aIGiNC 164 (698)
.|+++|++-=
T Consensus 380 ----~GA~~V~vGs 389 (511)
T 3usb_A 380 ----AGAHVVMLGS 389 (511)
T ss_dssp ----TTCSEEEEST
T ss_pred ----hCchhheecH
Confidence 5788877753
No 366
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=23.60 E-value=80 Score=31.08 Aligned_cols=86 Identities=12% Similarity=0.074 Sum_probs=54.6
Q ss_pred HHHHHHHHhCCCCEEEE-----ecCcCHHHHHHHHHHHHhc--CCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCC
Q psy13907 84 RPRIEALIQGGIDLLAI-----ETLPAQEEAMVLAELIKEY--PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQ 156 (698)
Q Consensus 84 ~~qi~~l~~~GVD~il~-----ETi~~l~Ea~aa~~a~~~~--~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~ 156 (698)
.+.++.+.+.|+|++-+ -.+|++..-..+++.+|+. +++|+-+.+-+.+.+ .-++.+++ .|
T Consensus 20 ~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~-----~~i~~~~~-------aG 87 (228)
T 3ovp_A 20 GAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPE-----QWVKPMAV-------AG 87 (228)
T ss_dssp HHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGG-----GGHHHHHH-------HT
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHH-----HHHHHHHH-------cC
Confidence 45677777899999988 4557776656677777765 578988888765432 12333322 46
Q ss_pred ceEEEEcCCChhhhHHHHHHhHhhc
Q psy13907 157 LVAVGVNCLAPHYVESLLTSAEVEG 181 (698)
Q Consensus 157 ~~aIGiNC~~p~~i~~~l~~~~~~~ 181 (698)
++.|-+=+-..+.+...++.+++.+
T Consensus 88 ad~itvH~Ea~~~~~~~i~~i~~~G 112 (228)
T 3ovp_A 88 ANQYTFHLEATENPGALIKDIRENG 112 (228)
T ss_dssp CSEEEEEGGGCSCHHHHHHHHHHTT
T ss_pred CCEEEEccCCchhHHHHHHHHHHcC
Confidence 7777775543345556666665543
No 367
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=23.43 E-value=2.7e+02 Score=30.39 Aligned_cols=65 Identities=14% Similarity=0.040 Sum_probs=47.9
Q ss_pred HHHHHHhCCCCEEEEe-cCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 86 RIEALIQGGIDLLAIE-TLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 86 qi~~l~~~GVD~il~E-Ti~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
|+......|+|.+++= |+-+..+++..++.++++ ++-+++-.. +.+++-..+. .+++.||+|=
T Consensus 122 Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~l-gm~~LvEvh-----------~~eE~~~A~~----lga~iIGinn 185 (452)
T 1pii_A 122 QIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSL-EMGVLTEVS-----------NEEEQERAIA----LGAKVVGINN 185 (452)
T ss_dssp HHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHT-TCEEEEEEC-----------SHHHHHHHHH----TTCSEEEEES
T ss_pred HHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHc-CCeEEEEeC-----------CHHHHHHHHH----CCCCEEEEeC
Confidence 5555677999998776 666667899999999984 888776652 3456555443 6899999997
Q ss_pred CC
Q psy13907 165 LA 166 (698)
Q Consensus 165 ~~ 166 (698)
..
T Consensus 186 r~ 187 (452)
T 1pii_A 186 RD 187 (452)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 368
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=23.27 E-value=1.2e+02 Score=34.13 Aligned_cols=48 Identities=17% Similarity=0.359 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCEEEEecCc-CHHHHHHHHHHHHh-cCCCeEEEEEE
Q psy13907 82 YHRPRIEALIQGGIDLLAIETLP-AQEEAMVLAELIKE-YPGLKAWISFS 129 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ETi~-~l~Ea~aa~~a~~~-~~~~Pv~iSft 129 (698)
...+++++|+++|||+|++.|-. +..-....++.+|+ ++++++++.=.
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNV 330 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNV 330 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred cHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccc
Confidence 35679999999999999999754 33445556666665 46888886543
No 369
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=23.16 E-value=1.7e+02 Score=29.35 Aligned_cols=113 Identities=15% Similarity=0.172 Sum_probs=63.8
Q ss_pred CCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC-CChhhhHHHHHHhcCCCCEEE-ecCCCCCcCCCC
Q psy13907 458 PGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVPLLC-CPNSGETFDPGQ 535 (698)
Q Consensus 458 ~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC-~~p~~~~~~l~~l~~~~pl~~-yPNaG~~~d~~~ 535 (698)
.+.+|+.-+-+-| =|.|....++.+.+ ..+++.+-++. .|.+.|.++++.......+.+ .-|.|... ..+
T Consensus 75 ~g~~VflDlK~~D-----I~nTv~~~a~~~~~--~lg~d~vTvh~~~G~~~l~~~~~~~~~gv~vL~~tS~~~~~~-~q~ 146 (255)
T 3qw3_A 75 AGIPVVLDAKRGD-----IADTADAYATSAFK--HLNAHAITASPYMGSDSLQPFMRYPDKAVFVLCKTSNKGSND-LQC 146 (255)
T ss_dssp TTCCBEEEEEECC-----CHHHHHHHHHHHHT--TSCCSEEEECCTTCHHHHHHHHTCTTSEEEEEEECCSGGGGT-TTT
T ss_pred CCCeEEEEeecCC-----cHHHHHHHHHHHHH--HcCCCEEEEcccCCHHHHHHHHHhhCCceEEEEeCCCccHHH-HHh
Confidence 4688888777665 34455555655532 35678999999 788888888865322222222 23333111 010
Q ss_pred cccccCC-C-hhhHHHHHHH-HHHcCCeEEeecCCCc-hHHHHHHHhcccc
Q psy13907 536 RIWMNKD-S-VPSVDTYVPR-WLDTGVKYVGGCCRTN-ADDMKNVNQVPVK 582 (698)
Q Consensus 536 g~~~~~~-~-p~~~a~~~~~-~~~~G~~iiGGCCGTt-P~hI~al~~~v~~ 582 (698)
...+. + .+...+.++. |.+.|. .|==||.| |+.++.|++.+..
T Consensus 147 --~~~~~~~~~~~V~~~a~~~~~~~g~--~GvV~~at~~~e~~~ir~~~~~ 193 (255)
T 3qw3_A 147 --LRVGDRYLYEAVAERAEGPWNVNGN--VGLVVGATDPVALARVRARAPT 193 (255)
T ss_dssp --SEETTEEHHHHHHHHHHTGGGGGSC--EEEEECSSCHHHHHHHHHHCSS
T ss_pred --cccCCCCHHHHHHHHHHHHhhhhCC--eEEEECCCCHHHHHHHHHHCCC
Confidence 10011 1 2344555555 655554 45556654 9999999987754
No 370
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A*
Probab=23.09 E-value=2.1e+02 Score=29.21 Aligned_cols=47 Identities=9% Similarity=0.109 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhCC--CCEEEEecCc----CHHHHHHHHHHHHhcCCCeEEEE
Q psy13907 80 IDYHRPRIEALIQGG--IDLLAIETLP----AQEEAMVLAELIKEYPGLKAWIS 127 (698)
Q Consensus 80 ~~~~~~qi~~l~~~G--VD~il~ETi~----~l~Ea~aa~~a~~~~~~~Pv~iS 127 (698)
.+.+...++.|.+.| +|.|-+..-. ...+++..++.+.. .++|||||
T Consensus 180 ~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~l~~~a~-~g~pv~iT 232 (315)
T 3cui_A 180 SNSLYDLVKDFKARGVPLDCVGFQSHLIVGQVPGDFRQNLQRFAD-LGVDVRIT 232 (315)
T ss_dssp HHHHHHHHHHHHHHTCCCCEEEECCEEETTCCCTTHHHHHHHHHT-TTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCcccEEEeeeecCCCCCHHHHHHHHHHHHh-cCCceEEE
Confidence 345566777777667 6999886531 13466777777776 58999997
No 371
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=22.91 E-value=3.2e+02 Score=26.38 Aligned_cols=95 Identities=12% Similarity=0.070 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEE
Q psy13907 83 HRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGV 162 (698)
Q Consensus 83 ~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGi 162 (698)
..+.++.+.+.|+|.+.+-+++. .+.+..++++++ .+..+++.+ +..+..+.++.+......-+-.+-+
T Consensus 97 ~~~~~~~~~~~Gad~v~~~~~~~-~~~~~~~~~~~~-~g~~~~~~i---------~~~t~~e~~~~~~~~~d~~i~~~~~ 165 (248)
T 1geq_A 97 VRNFLAEAKASGVDGILVVDLPV-FHAKEFTEIARE-EGIKTVFLA---------APNTPDERLKVIDDMTTGFVYLVSL 165 (248)
T ss_dssp HHHHHHHHHHHTCCEEEETTCCG-GGHHHHHHHHHH-HTCEEEEEE---------CTTCCHHHHHHHHHHCSSEEEEECC
T ss_pred HHHHHHHHHHCCCCEEEECCCCh-hhHHHHHHHHHH-hCCCeEEEE---------CCCCHHHHHHHHHhcCCCeEEEEEC
Q ss_pred cCCChhhhHHHHHHhHhhcccccccccccccCCCh-----HHHHHHHHHHHHcCCCCCCCcCCCcCccEEe
Q psy13907 163 NCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKP-----IQLLSIELELAAAGKMPSGTTQIPFEAPLKA 228 (698)
Q Consensus 163 NC~~p~~i~~~l~~~~~~~~~~~~p~~~~~~~~gP-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 228 (698)
.-.. |. ...++.++++++. . +.||.+
T Consensus 166 ~G~~-----------------------------g~~~~~~~~~~~~i~~l~~~------~-----~~pi~~ 196 (248)
T 1geq_A 166 YGTT-----------------------------GAREEIPKTAYDLLRRAKRI------C-----RNKVAV 196 (248)
T ss_dssp C------------------------------------CCCHHHHHHHHHHHHH------C-----SSCEEE
T ss_pred CccC-----------------------------CCCCCCChhHHHHHHHHHhh------c-----CCCEEE
No 372
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=22.60 E-value=1.2e+02 Score=31.36 Aligned_cols=43 Identities=9% Similarity=0.217 Sum_probs=29.6
Q ss_pred HHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEe
Q psy13907 423 PRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSC 468 (698)
Q Consensus 423 ~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~ 468 (698)
++++..+++|+|+|++.+| +..+++.++..++. +..+-+|.-+
T Consensus 218 ~e~~eAl~aGaDiImLDn~-s~~~l~~av~~~~~--~v~leaSGGI 260 (300)
T 3l0g_A 218 SQVEESLSNNVDMILLDNM-SISEIKKAVDIVNG--KSVLEVSGCV 260 (300)
T ss_dssp HHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHTT--SSEEEEESSC
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHhhcC--ceEEEEECCC
Confidence 3444445679999999995 56888988887763 4555555433
No 373
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=22.49 E-value=1.6e+02 Score=25.36 Aligned_cols=44 Identities=9% Similarity=0.220 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHh
Q psy13907 75 TPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE 118 (698)
Q Consensus 75 s~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~ 118 (698)
+.+++......-++.|-+.|+|.|++|.+|.-..-.++-.-+++
T Consensus 53 ~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~k 96 (105)
T 2yv4_A 53 SVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRK 96 (105)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHH
Confidence 44666666666788887889999999999997776776665555
No 374
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=22.44 E-value=5.1e+02 Score=25.97 Aligned_cols=76 Identities=8% Similarity=-0.063 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCc-----CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHH
Q psy13907 74 TTPQELIDYHRPRIEALIQGGIDLLAIETLP-----AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARD 148 (698)
Q Consensus 74 ~s~eel~~~~~~qi~~l~~~GVD~il~ETi~-----~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~ 148 (698)
++.+|+...-. -++.+.+.|+|.|+|--+. |..-++..+++++ ++|+...-.|+.- .+..++++.
T Consensus 67 Ys~~E~~~M~~-Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~---~~~vTFHRAfD~~------~d~~~ale~ 136 (256)
T 1twd_A 67 YSDGEFAAILE-DVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG---PLAVTFHRAFDMC------ANPLYTLNN 136 (256)
T ss_dssp CCHHHHHHHHH-HHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT---TSEEEECGGGGGC------SCHHHHHHH
T ss_pred CCHHHHHHHHH-HHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC---CCcEEEECchhcc------CCHHHHHHH
Confidence 56677766555 5788888999999998774 4555555555554 5665444444321 346777777
Q ss_pred HHhhCCCCceEEEE
Q psy13907 149 VYAKNPAQLVAVGV 162 (698)
Q Consensus 149 l~~~~~~~~~aIGi 162 (698)
+.. .+++-|.-
T Consensus 137 L~~---lG~~rILT 147 (256)
T 1twd_A 137 LAE---LGIARVLT 147 (256)
T ss_dssp HHH---HTCCEEEE
T ss_pred HHH---cCCCEEEC
Confidence 753 46666663
No 375
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=22.36 E-value=6.3e+02 Score=25.67 Aligned_cols=99 Identities=12% Similarity=0.103 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEEEEEEecC------CCccCCCCc--HHHHHHHHHHh
Q psy13907 419 DYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKD------EKHTCHGDK--FGLIARDVYAK 490 (698)
Q Consensus 419 ~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~iS~t~~~------~g~l~~G~~--l~~~v~~~~~~ 490 (698)
+.++.-++.+.++|++.+-+|--. |...-++++.+ .++|||--+-++. ++...-|++ ..++++.....
T Consensus 113 ~a~~na~rl~~eaGa~aVklEdg~---e~~~~I~al~~-agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~ 188 (281)
T 1oy0_A 113 AALAAATRFLKDGGAHAVKLEGGE---RVAEQIACLTA-AGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAV 188 (281)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEBSG---GGHHHHHHHHH-HTCCEEEEEECCC--------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEEECCcH---HHHHHHHHHHH-CCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHH
Confidence 445555666777999999999863 44444555555 3789984443322 222234444 23444433322
Q ss_pred CCCCceEEEEcCCChhhhHHHHHHhcCCCCEEE
Q psy13907 491 NPAQLVAVGVNCLAPHYVESLLTSAGRDVPLLC 523 (698)
Q Consensus 491 ~~~~~~~iGlNC~~p~~~~~~l~~l~~~~pl~~ 523 (698)
..++.++|=+-|...+....+-+.+ ++|++-
T Consensus 189 ~eAGA~~ivlE~vp~~~a~~it~~l--~iP~ig 219 (281)
T 1oy0_A 189 AEAGAFAVVMEMVPAELATQITGKL--TIPTVG 219 (281)
T ss_dssp HHHTCSEEEEESCCHHHHHHHHHHC--SSCEEE
T ss_pred HHcCCcEEEEecCCHHHHHHHHHhC--CCCEEE
Confidence 2367889999997666565555555 467654
No 376
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=22.24 E-value=3e+02 Score=27.54 Aligned_cols=49 Identities=14% Similarity=0.092 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEE
Q psy13907 74 TTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 125 (698)
Q Consensus 74 ~s~eel~~~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~ 125 (698)
.+.+++.+...+.++.|.+.|+|+|++=....- ..+++.+++..++||+
T Consensus 49 ~s~~~i~~~~~~~~~~L~~~g~d~IViACNTas---~~~l~~lr~~~~iPVi 97 (276)
T 2dwu_A 49 RSVEEVQSFVFEMVEFLKQFPLKALVVACNTAA---AATLAALQEALSIPVI 97 (276)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHH---HHHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCcHH---HHHHHHHHHHCCCCEE
Confidence 567999999999999998899999996532221 1246666654578876
No 377
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=22.23 E-value=1.7e+02 Score=31.17 Aligned_cols=52 Identities=15% Similarity=0.205 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhCCC--CEEEecc-----cCCHHHHHHHHHHHHhcCCCeEEEE-EEecC
Q psy13907 418 IDYHRPRIEALIQGGI--DLLAIET-----LPAQEEAMVLAELIKEYPGLKAWIS-FSCKD 470 (698)
Q Consensus 418 ~~~y~~qi~~L~~~Gv--Dlll~ET-----i~~~~Eakaa~~a~~~~~~~Pv~iS-~t~~~ 470 (698)
.+.+.++++.|.+.|+ |.|-+.. .++..+.+.++..+.. .++||||| +.+..
T Consensus 211 ~~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~-lGlpI~iTElDi~~ 270 (379)
T 1r85_A 211 RTALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAA-LGLDNQITELDVSM 270 (379)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHHHH-TTCEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHHHh-cCCeEEEeeccccC
Confidence 4677788999998885 9997753 3678899999988887 48999998 55543
No 378
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=22.22 E-value=1.4e+02 Score=28.82 Aligned_cols=85 Identities=11% Similarity=0.125 Sum_probs=49.2
Q ss_pred HHHHHHHHhCCCCEEEEe-----cCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCce
Q psy13907 84 RPRIEALIQGGIDLLAIE-----TLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLV 158 (698)
Q Consensus 84 ~~qi~~l~~~GVD~il~E-----Ti~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~ 158 (698)
.+.++.+.++|+|++-+- ++|++..-...++.+++.++.|+-+.+-+.+. +..++.+.+ .+++
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~-----~~~i~~~~~-------agad 89 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNP-----SDYVEPLAK-------AGAS 89 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCG-----GGGHHHHHH-------HTCS
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCH-----HHHHHHHHH-------cCCC
Confidence 457788888999998665 55663322345555666566788888877543 222333332 3677
Q ss_pred EEEEcCCChhhh-HHHHHHhHhh
Q psy13907 159 AVGVNCLAPHYV-ESLLTSAEVE 180 (698)
Q Consensus 159 aIGiNC~~p~~i-~~~l~~~~~~ 180 (698)
+|-+=....+.. ...++.++..
T Consensus 90 ~v~vH~~~~~~~~~~~~~~i~~~ 112 (228)
T 1h1y_A 90 GFTFHIEVSRDNWQELIQSIKAK 112 (228)
T ss_dssp EEEEEGGGCTTTHHHHHHHHHHT
T ss_pred EEEECCCCcccHHHHHHHHHHHc
Confidence 775555433333 5555555443
No 379
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=22.03 E-value=3e+02 Score=28.91 Aligned_cols=81 Identities=12% Similarity=0.027 Sum_probs=47.2
Q ss_pred CCCeEEEEEEecCCCccCCCCcHH---HHHHHHHHhCCCCceEEEEcCC------------ChhhhHHHHHHhc--CCCC
Q psy13907 458 PGLKAWISFSCKDEKHTCHGDKFG---LIARDVYAKNPAQLVAVGVNCL------------APHYVESLLTSAG--RDVP 520 (698)
Q Consensus 458 ~~~Pv~iS~t~~~~g~l~~G~~l~---~~v~~~~~~~~~~~~~iGlNC~------------~p~~~~~~l~~l~--~~~p 520 (698)
.+.|+++|+. |.+.. ++++.+......+.+.|=|||. .|+.+..+++.+. .++|
T Consensus 125 ~~~pvivsI~---------G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~P 195 (354)
T 4ef8_A 125 GKKPLFLSMS---------GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHS 195 (354)
T ss_dssp TTCCEEEEEC---------CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSC
T ss_pred CCCcEEEEec---------cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCC
Confidence 3578988873 33343 4555553100123567778873 3566677777776 6789
Q ss_pred EEEecCCCCCcCCCCcccccCCChhhHHHHHHHHHHcC-Ce
Q psy13907 521 LLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTG-VK 560 (698)
Q Consensus 521 l~~yPNaG~~~d~~~g~~~~~~~p~~~a~~~~~~~~~G-~~ 560 (698)
|.+.--.+ | +.+++++.++.+.+.| +.
T Consensus 196 V~vKi~p~---------~----d~~~~~~~a~~~~~~Gg~d 223 (354)
T 4ef8_A 196 FGVKMPPY---------F----DFAHFDAAAEILNEFPKVQ 223 (354)
T ss_dssp EEEEECCC---------C----SHHHHHHHHHHHHTCTTEE
T ss_pred eEEEecCC---------C----CHHHHHHHHHHHHhCCCcc
Confidence 88764321 1 3456777666666666 44
No 380
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=21.89 E-value=1.3e+02 Score=25.84 Aligned_cols=46 Identities=9% Similarity=0.205 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhc
Q psy13907 412 TTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEY 457 (698)
Q Consensus 412 ~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~ 457 (698)
-+.++....-...++.|-+.|+|.|++|.+|+.-...|+..=+++.
T Consensus 52 ~~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~kA 97 (105)
T 2yv4_A 52 SSVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRKA 97 (105)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHHh
Confidence 4677877777888899988999999999999977777776666653
No 381
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=21.78 E-value=4e+02 Score=25.15 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhCCCCEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcC--CCccCCCCCHHHHHHHHHhhCCCCceE
Q psy13907 82 YHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKD--EKHTCHGDKFGLIARDVYAKNPAQLVA 159 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~--~g~l~~G~~~~~~~~~l~~~~~~~~~a 159 (698)
...+.++.+.++|++.+.+.+ .+. ++.+++..++|+. .....+ ++++.-+.+..++-..+. .+++.
T Consensus 24 ~~~~~a~~~~~~Ga~~i~~~~---~~~----i~~i~~~~~~pv~-~~~~~~~~~~~~~i~~~~~~i~~~~~----~Gad~ 91 (223)
T 1y0e_A 24 IMSKMALAAYEGGAVGIRANT---KED----ILAIKETVDLPVI-GIVKRDYDHSDVFITATSKEVDELIE----SQCEV 91 (223)
T ss_dssp HHHHHHHHHHHHTCSEEEEES---HHH----HHHHHHHCCSCEE-EECBCCCTTCCCCBSCSHHHHHHHHH----HTCSE
T ss_pred cHHHHHHHHHHCCCeeeccCC---HHH----HHHHHHhcCCCEE-eeeccCCCccccccCCcHHHHHHHHh----CCCCE
Confidence 445678888889999997753 332 4445554688984 332221 333333344444433322 46777
Q ss_pred EEEcCCC---h-hhhHHHHHHhHhh
Q psy13907 160 VGVNCLA---P-HYVESLLTSAEVE 180 (698)
Q Consensus 160 IGiNC~~---p-~~i~~~l~~~~~~ 180 (698)
|-+.... | +.+..+++.+++.
T Consensus 92 v~l~~~~~~~p~~~~~~~i~~~~~~ 116 (223)
T 1y0e_A 92 IALDATLQQRPKETLDELVSYIRTH 116 (223)
T ss_dssp EEEECSCSCCSSSCHHHHHHHHHHH
T ss_pred EEEeeecccCcccCHHHHHHHHHHh
Confidence 7666643 3 2444555555443
No 382
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=21.38 E-value=4.5e+02 Score=26.70 Aligned_cols=77 Identities=13% Similarity=0.048 Sum_probs=49.4
Q ss_pred HHHHHHhCCC-CEEEEecCcCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCceEEEEcC
Q psy13907 86 RIEALIQGGI-DLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC 164 (698)
Q Consensus 86 qi~~l~~~GV-D~il~ETi~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~aIGiNC 164 (698)
.+.+..++|. .++..+++++.++++..++.+++..+.|+-+.+.+.+. .....+.+.++.+.. .++++|-++.
T Consensus 31 la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~---~~~~~~~~~~~~~~~---~g~d~V~~~~ 104 (328)
T 2gjl_A 31 MAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPT---QKPVPYAEYRAAIIE---AGIRVVETAG 104 (328)
T ss_dssp HHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCC---SSCCCHHHHHHHHHH---TTCCEEEEEE
T ss_pred HHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecccc---ccCccHHHHHHHHHh---cCCCEEEEcC
Confidence 3455555654 55555677778888888888887677899888877521 112335666665543 4677777766
Q ss_pred CChh
Q psy13907 165 LAPH 168 (698)
Q Consensus 165 ~~p~ 168 (698)
..|.
T Consensus 105 g~p~ 108 (328)
T 2gjl_A 105 NDPG 108 (328)
T ss_dssp SCCH
T ss_pred CCcH
Confidence 5553
No 383
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=21.36 E-value=2.3e+02 Score=28.38 Aligned_cols=50 Identities=12% Similarity=0.195 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEecccCCHHHHHHHHHHHHhcCCCeEE
Q psy13907 411 STTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAW 463 (698)
Q Consensus 411 ~~t~del~~~y~~qi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~~~Pv~ 463 (698)
..+.+++.+.-.+.++.|.+.|+|++++=+.... ..++..+++..++||+
T Consensus 53 ~~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas---~~~l~~lr~~~~iPvi 102 (273)
T 2oho_A 53 PRPKKQIKEYTWELVNFLLTQNVKMIVFACNTAT---AVAWEEVKAALDIPVL 102 (273)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---HHHHHHHHHHCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchHh---HHHHHHHHHhCCCCEE
Confidence 4578999999999999999999999998543322 2346777766688965
No 384
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti}
Probab=21.29 E-value=1.3e+02 Score=32.86 Aligned_cols=80 Identities=9% Similarity=0.148 Sum_probs=51.6
Q ss_pred chhhcccChHHHHHHHHHHHHHhcchhhcccccCChhchHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCccCCCCc
Q psy13907 306 CSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHV 385 (698)
Q Consensus 306 s~~~~l~~Pe~V~~iH~~yl~AGAdII~TNTf~as~~~l~~~~g~~~~~~~eln~~av~lAr~A~~~~~~~~~~~~~~~~ 385 (698)
|-.+.|..|+-.+.+++ |-+.|||+.+| |+- ..+.+ +|++.+..++ .+|.
T Consensus 95 Si~LDLk~~eGr~~l~~--Li~~ADVvven-fRP--G~~er-lGL~ye~L~~------------------------~NP~ 144 (456)
T 3ubm_A 95 SVELNTKTPEGKAVFEK--CIKWADILLEN-FRP--GAMER-MGFTWEYLQQ------------------------LNPR 144 (456)
T ss_dssp EEECCTTSHHHHHHHHH--HHHHCSEEEEC-CST--THHHH-TTCCHHHHHH------------------------HCTT
T ss_pred EEEeeCCCHHHHHHHHH--HHHhCCEEEEC-CCc--cHHHH-hCCCHHHHHH------------------------hCCC
Confidence 44567788876554433 44569999999 653 33444 5886544321 1367
Q ss_pred EEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q psy13907 386 RVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRP 423 (698)
Q Consensus 386 ~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~ 423 (698)
+|-.||..||. +|+|.+-..+|-+.++..=
T Consensus 145 LIy~sisGfG~--------~GP~a~rpg~D~~~qA~sG 174 (456)
T 3ubm_A 145 LIYGTVKGFGE--------NSPWAGVSAYENVAQCAGG 174 (456)
T ss_dssp CEEEEEESSCT--------TCTTTTSCCCHHHHHHHTT
T ss_pred cEEEEEEecCC--------CCCCCCCCCcHHHHHHHhC
Confidence 89999989884 4667666777877766543
No 385
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=20.95 E-value=1.2e+02 Score=29.51 Aligned_cols=67 Identities=10% Similarity=-0.001 Sum_probs=39.0
Q ss_pred HHHHHHHHhCCCCEEEEecC-----cCHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHHhhCCCCce
Q psy13907 84 RPRIEALIQGGIDLLAIETL-----PAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLV 158 (698)
Q Consensus 84 ~~qi~~l~~~GVD~il~ETi-----~~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~~~~~~~~~ 158 (698)
.+.++.+.++|+|.|-+=++ +.... ..++.+++..++|+++..-+ . +++++-..+. .+++
T Consensus 34 ~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~ipv~v~ggi------~---~~~~~~~~l~----~Gad 98 (244)
T 2y88_A 34 VDAALGWQRDGAEWIHLVDLDAAFGRGSNH--ELLAEVVGKLDVQVELSGGI------R---DDESLAAALA----TGCA 98 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHTTSCCCH--HHHHHHHHHCSSEEEEESSC------C---SHHHHHHHHH----TTCS
T ss_pred HHHHHHHHHcCCCEEEEEcCcccccCCChH--HHHHHHHHhcCCcEEEECCC------C---CHHHHHHHHH----cCCC
Confidence 34566777899999998653 22211 34444444468999884322 1 2444333232 5788
Q ss_pred EEEEcCC
Q psy13907 159 AVGVNCL 165 (698)
Q Consensus 159 aIGiNC~ 165 (698)
.|.+...
T Consensus 99 ~V~lg~~ 105 (244)
T 2y88_A 99 RVNVGTA 105 (244)
T ss_dssp EEEECHH
T ss_pred EEEECch
Confidence 8888764
No 386
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=20.92 E-value=8.9e+02 Score=26.94 Aligned_cols=123 Identities=12% Similarity=0.106 Sum_probs=69.5
Q ss_pred CCcEEEEecCCcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCC-----CCEEEecc---------cCCHHHHH
Q psy13907 383 RHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGG-----IDLLAIET---------LPAQEEAM 448 (698)
Q Consensus 383 ~~~~VAGsiGP~~~~l~~~~ey~g~y~~~~t~del~~~y~~qi~~L~~~G-----vDlll~ET---------i~~~~Eak 448 (698)
.+.+|-|-+--|..|++||..| . .+.+++. ++++.+++.| +|+|=+-- ++.-+|.+
T Consensus 223 ~~~~iMGIlNvTPDSFsDGG~~----~--~~~~~al----~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~ 292 (545)
T 2bmb_A 223 SPTYIMAIFNATPDSFSDGGEH----F--ADIESQL----NDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIR 292 (545)
T ss_dssp SCCEEEEEEECSCSSTTTTTTT----T--TCHHHHH----HHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHH
T ss_pred CCCeEEEEEeCCCCCCcCCCcC----c--CCHHHHH----HHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHH
Confidence 3467889988888999987433 1 1555554 4566677789 99986653 22255555
Q ss_pred HHHHHHHhcC-----C-CeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCceEEEEcC---C-ChhhhHHHHHHhcCC
Q psy13907 449 VLAELIKEYP-----G-LKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNC---L-APHYVESLLTSAGRD 518 (698)
Q Consensus 449 aa~~a~~~~~-----~-~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~~~iGlNC---~-~p~~~~~~l~~l~~~ 518 (698)
-++-+++... . ..+.||+--.. .+++++..+ .+..- ||= . .-..|.+++++.. +
T Consensus 293 RvvpvI~~i~~~~~~~~~~vpISIDT~~----------a~VaeaAl~---aGadI--INDVsg~~~d~~m~~vva~~~-~ 356 (545)
T 2bmb_A 293 RSIPLIKAIRESTELPQDKVILSIDTYR----------SNVAKEAIK---VGVDI--INDISGGLFDSNMFAVIAENP-E 356 (545)
T ss_dssp HHHHHHHHHHHCSSSCGGGEEEEEECCC----------HHHHHHHHH---TTCCE--EEETTTTSSCTTHHHHHHTCT-T
T ss_pred HHHHHHHHHHhhccccCCCCeEEEeCCc----------HHHHHHHHH---cCCCE--EEeCCCCcCChHHHHHHHHhC-C
Confidence 5544444321 1 25667773211 245555443 22222 453 1 2235555554431 6
Q ss_pred CCEEEecCCCCCc
Q psy13907 519 VPLLCCPNSGETF 531 (698)
Q Consensus 519 ~pl~~yPNaG~~~ 531 (698)
.|+++.-+-|.|.
T Consensus 357 ~~vVlmH~rG~p~ 369 (545)
T 2bmb_A 357 ICYILSHTRGDIS 369 (545)
T ss_dssp SEEEEECCCSCTT
T ss_pred CeEEEECCCCCCC
Confidence 8888888888664
No 387
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=20.85 E-value=3.3e+02 Score=27.05 Aligned_cols=67 Identities=16% Similarity=0.154 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecCc--------CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHH
Q psy13907 77 QELIDYHRPRIEALIQGGIDLLAIETLP--------AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARD 148 (698)
Q Consensus 77 eel~~~~~~qi~~l~~~GVD~il~ETi~--------~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~ 148 (698)
+.+.+.+++.++...+.||. |++|+++ +..++..+++.+.. | .+.++++.......|.++.+.++.
T Consensus 147 ~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v~~----~-~vg~~~D~~H~~~~g~d~~~~l~~ 220 (309)
T 2hk0_A 147 ARGVEGINGIADFANDLGIN-LCIEVLNRFENHVLNTAAEGVAFVKDVGK----N-NVKVMLDTFHMNIEEDSFGDAIRT 220 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHHTC----T-TEEEEEEHHHHHHHCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCE-EEEeecccccccccCCHHHHHHHHHHcCC----C-CeEEEEehhhHhhcCcCHHHHHHH
Confidence 34455555555555567885 6779984 56777766665542 2 245555433333457788887776
Q ss_pred H
Q psy13907 149 V 149 (698)
Q Consensus 149 l 149 (698)
+
T Consensus 221 ~ 221 (309)
T 2hk0_A 221 A 221 (309)
T ss_dssp H
T ss_pred H
Confidence 5
No 388
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=20.84 E-value=2e+02 Score=29.92 Aligned_cols=50 Identities=8% Similarity=-0.051 Sum_probs=35.2
Q ss_pred HHHHHHHhCCCCEEEEecCcC---HHHHHHHHHHHHhcCCCeEEEEEEEcCCCc
Q psy13907 85 PRIEALIQGGIDLLAIETLPA---QEEAMVLAELIKEYPGLKAWISFSCKDEKH 135 (698)
Q Consensus 85 ~qi~~l~~~GVD~il~ETi~~---l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~ 135 (698)
+.++++++.|++.|++|++-. ..++..+++.+.+ .++||+++-.|..+..
T Consensus 233 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~-~Gi~VV~~Sr~~~G~v 285 (332)
T 2wlt_A 233 DLFQASLNSHAKGVVIAGVGNGNVSAGFLKAMQEASQ-MGVVIVRSSRVGSGGV 285 (332)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHH-TTCEEEEEESSSSSCC
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHH-CCCEEEEECCCCCCCc
Confidence 457778888999999998864 2444444444444 5899999888865544
No 389
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=20.74 E-value=5.9e+02 Score=24.80 Aligned_cols=100 Identities=17% Similarity=0.096 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhC-CCCEEEecccC--CHHHHHHHHHHHHhcCCCeEEEEEEecCCCccCCCCcHHHHHHHHHHhCCCCc
Q psy13907 419 DYHRPRIEALIQG-GIDLLAIETLP--AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQL 495 (698)
Q Consensus 419 ~~y~~qi~~L~~~-GvDlll~ETi~--~~~Eakaa~~a~~~~~~~Pv~iS~t~~~~g~l~~G~~l~~~v~~~~~~~~~~~ 495 (698)
+.|.+.++..++. ++|++=+|-.. +-...+.++..+++ .+..+++|.. +-..+++ ..+....+......++
T Consensus 83 ~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~-~~~kvI~S~H--df~~tp~---~~el~~~~~~~~~~ga 156 (238)
T 1sfl_A 83 DSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQ-YNKEVIISHH--NFESTPP---LDELQFIFFKMQKFNP 156 (238)
T ss_dssp HHHHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHH-TTCEEEEEEE--ESSCCCC---HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHh-cCCEEEEEec--CCCCCcC---HHHHHHHHHHHHHcCC
Q ss_pred eEEEEcC--CChhhhHHHHHHhc-----CCCCEEEe
Q psy13907 496 VAVGVNC--LAPHYVESLLTSAG-----RDVPLLCC 524 (698)
Q Consensus 496 ~~iGlNC--~~p~~~~~~l~~l~-----~~~pl~~y 524 (698)
+.+=+-+ ...++...+++... .+.|++++
T Consensus 157 DivKia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~ 192 (238)
T 1sfl_A 157 EYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGI 192 (238)
T ss_dssp SEEEEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEE
No 390
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=20.49 E-value=1.1e+02 Score=33.63 Aligned_cols=14 Identities=43% Similarity=0.695 Sum_probs=9.3
Q ss_pred HHHHHhCCCCEEEE
Q psy13907 87 IEALIQGGIDLLAI 100 (698)
Q Consensus 87 i~~l~~~GVD~il~ 100 (698)
++.+.+.|+|+|.+
T Consensus 292 a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 292 TEALIKAGADAVKV 305 (494)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 45556677777776
No 391
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=20.41 E-value=1.3e+02 Score=30.42 Aligned_cols=44 Identities=25% Similarity=0.208 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhCCCCEEEEec--CcCHHHHHHHHHHHHhcCCCeEEEE
Q psy13907 82 YHRPRIEALIQGGIDLLAIET--LPAQEEAMVLAELIKEYPGLKAWIS 127 (698)
Q Consensus 82 ~~~~qi~~l~~~GVD~il~ET--i~~l~Ea~aa~~a~~~~~~~Pv~iS 127 (698)
.|.+++...+++|..+|. |- -.+++|++.+++++++ .++++++.
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~-~g~~~~~~ 122 (294)
T 1lc0_A 77 SHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQ-KGRVLHEE 122 (294)
T ss_dssp GHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHH-TTCCEEEE
T ss_pred hHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHH-hCCEEEEE
Confidence 445555554455544332 52 2245555555555544 34444433
No 392
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=20.28 E-value=6.2e+02 Score=24.84 Aligned_cols=79 Identities=14% Similarity=0.043 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEecCc-----CHHHHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHH
Q psy13907 74 TTPQELIDYHRPRIEALIQGGIDLLAIETLP-----AQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARD 148 (698)
Q Consensus 74 ~s~eel~~~~~~qi~~l~~~GVD~il~ETi~-----~l~Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~ 148 (698)
++.+|+..... -++.+.+.|+|.|+|--+. |.+-++..+++++ ++|+.....|+. ..-.+..++++.
T Consensus 70 Ys~~E~~~M~~-Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~---~~~vTFHRAFD~----~~~~d~~~ale~ 141 (224)
T 2bdq_A 70 YNDLELRIMEE-DILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ---GLPLVFHMAFDV----IPKSDQKKSIDQ 141 (224)
T ss_dssp CCHHHHHHHHH-HHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT---TCCEEECGGGGG----SCTTTHHHHHHH
T ss_pred CCHHHHHHHHH-HHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC---CCeEEEECchhc----cCCcCHHHHHHH
Confidence 55677766555 5778888999999998763 5555666665554 566554444532 112456777877
Q ss_pred HHhhCCCCceEEEEc
Q psy13907 149 VYAKNPAQLVAVGVN 163 (698)
Q Consensus 149 l~~~~~~~~~aIGiN 163 (698)
+.. .+++-|.-.
T Consensus 142 L~~---lGv~rILTS 153 (224)
T 2bdq_A 142 LVA---LGFTRILLH 153 (224)
T ss_dssp HHH---TTCCEEEEC
T ss_pred HHH---cCCCEEECC
Confidence 753 577777643
No 393
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=20.05 E-value=1.2e+02 Score=31.42 Aligned_cols=65 Identities=12% Similarity=0.025 Sum_probs=34.3
Q ss_pred HHHHHHHhCCCCEEEEecCcC----H-H---------HHHHHHHHHHhcCCCeEEEEEEEcCCCccCCCCCHHHHHHHHH
Q psy13907 85 PRIEALIQGGIDLLAIETLPA----Q-E---------EAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVY 150 (698)
Q Consensus 85 ~qi~~l~~~GVD~il~ETi~~----l-~---------Ea~aa~~a~~~~~~~Pv~iSft~~~~g~l~~G~~~~~~~~~l~ 150 (698)
+.++.+.+.|||.|.+-+-+- . . .+..+.++.+. .++||+.+ |-..+|.++.+++.
T Consensus 161 e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~-~~ipVIa~------GGI~~g~Dv~kala--- 230 (336)
T 1ypf_A 161 EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKA-ASKPIIAD------GGIRTNGDVAKSIR--- 230 (336)
T ss_dssp HHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHT-CSSCEEEE------SCCCSTHHHHHHHH---
T ss_pred HHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHH-cCCcEEEe------CCCCCHHHHHHHHH---
Confidence 456667778888888832221 0 0 12333333333 47888754 33445554444332
Q ss_pred hhCCCCceEEEEc
Q psy13907 151 AKNPAQLVAVGVN 163 (698)
Q Consensus 151 ~~~~~~~~aIGiN 163 (698)
.|+++|++-
T Consensus 231 ----lGAdaV~iG 239 (336)
T 1ypf_A 231 ----FGATMVMIG 239 (336)
T ss_dssp ----TTCSEEEES
T ss_pred ----cCCCEEEeC
Confidence 467777664
Done!