Your job contains 1 sequence.
>psy13907
ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIVLEEKRDPAIASRHVRVAGSLGSYGAFL
HDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYP
GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAEVE
GQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHG
VFVNVQYNLKCELKRSHFNILSKDLQKINEFILENKLYLIDGGFSSQLSKHVGEDNVTEK
DNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIR
DAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDY
HRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKF
GLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMN
KDSVPSVDTYVPRWLDTGVKYVGGCCRTNADDMKNVNQVPVKFSITPESLTNARDKFNIP
RFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQN
IQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKIVM
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13907
(698 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BSI1 - symbol:DSCR3 "Uncharacterized protein"... 442 9.5e-64 2
UNIPROTKB|A8MTY9 - symbol:DSCR3 "Down syndrome critical r... 428 4.0e-62 2
UNIPROTKB|O14972 - symbol:DSCR3 "Down syndrome critical r... 428 4.0e-62 2
UNIPROTKB|E2RM98 - symbol:DSCR3 "Uncharacterized protein"... 427 8.6e-62 2
UNIPROTKB|A6QLW5 - symbol:DSCR3 "Uncharacterized protein"... 430 1.0e-61 2
UNIPROTKB|F1SGV6 - symbol:DSCR3 "Uncharacterized protein"... 423 2.5e-61 2
FB|FBgn0032726 - symbol:CG10621 species:7227 "Drosophila ... 625 4.3e-61 1
MGI|MGI:1206040 - symbol:Dscr3 "Down syndrome critical re... 423 3.5e-60 2
FB|FBgn0032727 - symbol:CG10623 species:7227 "Drosophila ... 590 2.2e-57 1
ZFIN|ZDB-GENE-030131-9545 - symbol:zgc:172121 "zgc:172121... 574 1.1e-55 1
FB|FBgn0037017 - symbol:CG4074 species:7227 "Drosophila m... 376 5.6e-51 2
UNIPROTKB|Q4VNK0 - symbol:SMT "Selenocysteine Se-methyltr... 516 1.5e-49 1
UNIPROTKB|Q58DN0 - symbol:DSCR3 "Down syndrome critical r... 321 1.6e-49 2
DICTYBASE|DDB_G0292212 - symbol:vps26l "vacuolar protein ... 341 2.0e-49 2
TAIR|locus:2077234 - symbol:HMT2 "homocysteine methyltran... 510 6.7e-49 1
TAIR|locus:2094419 - symbol:HMT3 "homocysteine S-methyltr... 494 3.3e-47 1
UNIPROTKB|Q47690 - symbol:mmuM species:83333 "Escherichia... 470 2.1e-44 1
TAIR|locus:2092120 - symbol:HMT-1 species:3702 "Arabidops... 466 6.1e-44 1
ZFIN|ZDB-GENE-040801-6 - symbol:dscr3 "Down syndrome crit... 463 1.3e-43 1
UNIPROTKB|A4ZGQ8 - symbol:HMT1 "Homocysteine S-methyltran... 460 2.9e-43 1
UNIPROTKB|B7Z6B1 - symbol:DSCR3 "cDNA FLJ53650, highly si... 428 1.1e-39 1
UNIPROTKB|A8MY26 - symbol:DSCR3 "cDNA FLJ53689, highly si... 428 1.1e-39 1
UNIPROTKB|B7Z606 - symbol:DSCR3 "cDNA FLJ59969, highly si... 428 1.1e-39 1
UNIPROTKB|E7EWN9 - symbol:DSCR3 "Down syndrome critical r... 235 6.4e-39 2
RGD|1306879 - symbol:Dscr3 "Down syndrome critical region... 222 7.9e-38 2
CGD|CAL0004923 - symbol:SAM4 species:5476 "Candida albica... 401 1.1e-36 1
TAIR|locus:2198075 - symbol:AT1G48550 "AT1G48550" species... 187 6.0e-23 2
SGD|S000006194 - symbol:SAM4 "S-adenosylmethionine-homocy... 273 8.5e-23 1
SGD|S000003985 - symbol:MHT1 "S-methylmethionine-homocyst... 270 1.8e-22 1
WB|WBGene00020491 - symbol:T13G4.4 species:6239 "Caenorha... 255 7.4e-21 1
ASPGD|ASPL0000037651 - symbol:AN3378 species:162425 "Emer... 199 6.7e-14 2
UNIPROTKB|F1N0S3 - symbol:MTR "Methionine synthase" speci... 206 1.3e-12 1
UNIPROTKB|Q4JIJ3 - symbol:MTR "Methionine synthase" speci... 206 1.3e-12 1
SGD|S000004940 - symbol:YMR321C "Putative protein of unkn... 171 7.8e-12 1
UNIPROTKB|F1NGK3 - symbol:MTR "Uncharacterized protein" s... 197 9.1e-12 1
UNIPROTKB|F1NLY0 - symbol:MTR "Uncharacterized protein" s... 197 1.3e-11 1
ZFIN|ZDB-GENE-031001-5 - symbol:mtr "5-methyltetrahydrofo... 197 1.3e-11 1
RGD|621283 - symbol:Mtr "5-methyltetrahydrofolate-homocys... 196 1.6e-11 1
UNIPROTKB|Q9Z2Q4 - symbol:Mtr "Methionine synthase" speci... 196 1.6e-11 1
UNIPROTKB|F1RHM1 - symbol:MTR "Uncharacterized protein" s... 196 1.6e-11 1
POMBASE|SPAC57A7.07c - symbol:SPAC57A7.07c "homocysteine ... 183 2.4e-11 1
MGI|MGI:894292 - symbol:Mtr "5-methyltetrahydrofolate-hom... 194 2.6e-11 1
UNIPROTKB|E2R716 - symbol:MTR "Uncharacterized protein" s... 190 7.2e-11 1
DICTYBASE|DDB_G0284699 - symbol:mtr "cobalamin-dependent ... 181 6.7e-10 1
UNIPROTKB|B7ZLW7 - symbol:MTR "Methionine synthase" speci... 178 1.3e-09 1
UNIPROTKB|Q99707 - symbol:MTR "Methionine synthase" speci... 178 1.4e-09 1
TIGR_CMR|CPS_1101 - symbol:CPS_1101 "5-methyltetrahydrofo... 173 4.7e-09 1
UNIPROTKB|Q81LY0 - symbol:BAS4157 "Methylenetetrahydrofol... 115 9.2e-09 2
TIGR_CMR|BA_4479 - symbol:BA_4479 "homocysteine S-methylt... 115 9.2e-09 2
TIGR_CMR|SPO_3398 - symbol:SPO_3398 "homocysteine S-methy... 158 1.6e-08 1
WB|WBGene00010988 - symbol:metr-1 species:6239 "Caenorhab... 159 1.6e-07 1
UNIPROTKB|Q9KUW9 - symbol:metH "Methionine synthase" spec... 153 6.8e-07 1
TIGR_CMR|VC_0390 - symbol:VC_0390 "5-methyltetrahydrofola... 153 6.8e-07 1
UNIPROTKB|Q0C0E4 - symbol:HNE_2102 "Putative metionine sy... 143 1.2e-06 1
TIGR_CMR|GSU_2974 - symbol:GSU_2974 "methylenetetrahydrof... 120 1.3e-05 2
UNIPROTKB|E1BSH9 - symbol:BHMT "Uncharacterized protein" ... 98 2.3e-05 2
TIGR_CMR|SO_1030 - symbol:SO_1030 "5-methyltetrahydrofola... 136 4.7e-05 1
UNIPROTKB|P13009 - symbol:metH species:83333 "Escherichia... 133 9.6e-05 1
TIGR_CMR|SPO_1884 - symbol:SPO_1884 "homocysteine S-methy... 114 0.00017 2
UNIPROTKB|Q5I597 - symbol:BHMT "Betaine--homocysteine S-m... 83 0.00097 2
>UNIPROTKB|E1BSI1 [details] [associations]
symbol:DSCR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030904
"retromer complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR005377 Pfam:PF03643 GO:GO:0005634
GO:GO:0007034 GO:GO:0030904 OMA:DSVQHQG CTD:10311
GeneTree:ENSGT00390000009324 EMBL:AADN02010801 EMBL:AADN02010802
IPI:IPI00600513 RefSeq:XP_416728.1 UniGene:Gga.16653
ProteinModelPortal:E1BSI1 Ensembl:ENSGALT00000025863 GeneID:418519
KEGG:gga:418519 NextBio:20821691 Uniprot:E1BSI1
Length = 297
Score = 442 (160.7 bits), Expect = 9.5e-64, Sum P(2) = 9.5e-64
Identities = 78/117 (66%), Positives = 98/117 (83%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITPE+L N +++ ++P+F I GHL ST C + +P TGE+V+E E +KS+ELQL
Sbjct: 154 PVDFTITPETLQNVKERASLPKFLIRGHLSSTNCVITQPLTGELVVESAEAAVKSIELQL 213
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
VRVETCGCAEGY+RDATEIQNIQI +G+V G+PIPIYMVFPRLFTCPTL T+NFK+
Sbjct: 214 VRVETCGCAEGYARDATEIQNIQIADGDVCRGLPIPIYMVFPRLFTCPTLETTNFKV 270
Score = 235 (87.8 bits), Expect = 9.5e-64, Sum P(2) = 9.5e-64
Identities = 44/82 (53%), Positives = 62/82 (75%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCEL 253
S KPIQ+++ +E+ GK+PSG T+IPFE PL K N+ L+ETYHGVFVN+QY L+C++
Sbjct: 65 SVKPIQIINSTIEMVKPGKLPSGKTEIPFEFPLHVKGNKVLYETYHGVFVNIQYTLRCDM 124
Query: 254 KRSHFNILSKDLQKINEFILEN 275
+RS +L+KDL K EFI+ +
Sbjct: 125 RRS---LLAKDLTKTCEFIVHS 143
>UNIPROTKB|A8MTY9 [details] [associations]
symbol:DSCR3 "Down syndrome critical region protein 3"
species:9606 "Homo sapiens" [GO:0007034 "vacuolar transport"
evidence=IEA] [GO:0030904 "retromer complex" evidence=IEA]
InterPro:IPR005377 Pfam:PF03643 GO:GO:0007034 GO:GO:0030904
HGNC:HGNC:3044 HOGENOM:HOG000294089 HOVERGEN:HBG051411
ChiTaRS:DSCR3 EMBL:AP001432 EMBL:AP001412 IPI:IPI00789523
ProteinModelPortal:A8MTY9 STRING:A8MTY9 PRIDE:A8MTY9
Ensembl:ENST00000398998 ArrayExpress:A8MTY9 Bgee:A8MTY9
Uniprot:A8MTY9
Length = 249
Score = 428 (155.7 bits), Expect = 4.0e-62, Sum P(2) = 4.0e-62
Identities = 76/117 (64%), Positives = 98/117 (83%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITPE+L N +++ +P+F + GHL+ST C + +P TGE+V+E +E I+SVELQL
Sbjct: 106 PVDFTITPETLQNVKERALLPKFLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQL 165
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
VRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PIYMVFPRLFTCPTL T+NFK+
Sbjct: 166 VRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKV 222
Score = 235 (87.8 bits), Expect = 4.0e-62, Sum P(2) = 4.0e-62
Identities = 46/97 (47%), Positives = 67/97 (69%)
Query: 181 GQSLELPVN--NTLISRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETY 238
G +L++ + N + PIQ+++ +E+ GK PSG T+IPFE PL K N+ L+ETY
Sbjct: 2 GTALDIKIKRANKVYHAGPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKVLYETY 61
Query: 239 HGVFVNVQYNLKCELKRSHFNILSKDLQKINEFILEN 275
HGVFVN+QY L+C++KRS +L+KDL K EFI+ +
Sbjct: 62 HGVFVNIQYTLRCDMKRS---LLAKDLTKTCEFIVHS 95
>UNIPROTKB|O14972 [details] [associations]
symbol:DSCR3 "Down syndrome critical region protein 3"
species:9606 "Homo sapiens" [GO:0007034 "vacuolar transport"
evidence=IEA] [GO:0030904 "retromer complex" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR005377 Pfam:PF03643 GO:GO:0005634 EMBL:CH471079
GO:GO:0007034 GO:GO:0030904 eggNOG:NOG321080 OMA:DSVQHQG
EMBL:D87343 EMBL:AK312707 EMBL:BC110655 IPI:IPI00298946 PIR:JC5698
RefSeq:NP_006043.1 UniGene:Hs.369488 ProteinModelPortal:O14972
DIP:DIP-47317N STRING:O14972 PhosphoSite:O14972 PaxDb:O14972
PRIDE:O14972 DNASU:10311 Ensembl:ENST00000309117 GeneID:10311
KEGG:hsa:10311 UCSC:uc002ywf.1 CTD:10311 GeneCards:GC21M038591
H-InvDB:HIX0022605 HGNC:HGNC:3044 HPA:HPA023288 MIM:605298
neXtProt:NX_O14972 PharmGKB:PA27496 HOGENOM:HOG000294089
HOVERGEN:HBG051411 InParanoid:O14972 ChiTaRS:DSCR3 GenomeRNAi:10311
NextBio:39075 ArrayExpress:O14972 Bgee:O14972 CleanEx:HS_DSCR3
Genevestigator:O14972 GermOnline:ENSG00000157538 Uniprot:O14972
Length = 297
Score = 428 (155.7 bits), Expect = 4.0e-62, Sum P(2) = 4.0e-62
Identities = 76/117 (64%), Positives = 98/117 (83%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITPE+L N +++ +P+F + GHL+ST C + +P TGE+V+E +E I+SVELQL
Sbjct: 154 PVDFTITPETLQNVKERALLPKFLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQL 213
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
VRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PIYMVFPRLFTCPTL T+NFK+
Sbjct: 214 VRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKV 270
Score = 235 (87.8 bits), Expect = 4.0e-62, Sum P(2) = 4.0e-62
Identities = 45/82 (54%), Positives = 61/82 (74%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCEL 253
S KPIQ+++ +E+ GK PSG T+IPFE PL K N+ L+ETYHGVFVN+QY L+C++
Sbjct: 65 SVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKVLYETYHGVFVNIQYTLRCDM 124
Query: 254 KRSHFNILSKDLQKINEFILEN 275
KRS +L+KDL K EFI+ +
Sbjct: 125 KRS---LLAKDLTKTCEFIVHS 143
>UNIPROTKB|E2RM98 [details] [associations]
symbol:DSCR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030904 "retromer complex" evidence=IEA]
[GO:0007034 "vacuolar transport" evidence=IEA] InterPro:IPR005377
Pfam:PF03643 GO:GO:0007034 GO:GO:0030904 OMA:DSVQHQG
GeneTree:ENSGT00390000009324 EMBL:AAEX03016527 EMBL:AAEX03016528
Ensembl:ENSCAFT00000015549 Uniprot:E2RM98
Length = 297
Score = 427 (155.4 bits), Expect = 8.6e-62, Sum P(2) = 8.6e-62
Identities = 76/117 (64%), Positives = 98/117 (83%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITPE+L N +++ +P+F I GHL+ST C + +P TGE+V+E +E IKS+ELQL
Sbjct: 154 PVDFTITPETLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQL 213
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
VRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PI+MVFPRLFTCPTL T+NFK+
Sbjct: 214 VRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIHMVFPRLFTCPTLETTNFKV 270
Score = 233 (87.1 bits), Expect = 8.6e-62, Sum P(2) = 8.6e-62
Identities = 44/82 (53%), Positives = 61/82 (74%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCEL 253
S KPIQ+++ +E+ GK PSG T+IPFE PL K N+ L+ETYHGVFVN+QY L+C++
Sbjct: 65 SVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHVKGNKVLYETYHGVFVNIQYTLRCDM 124
Query: 254 KRSHFNILSKDLQKINEFILEN 275
+RS +L+KDL K EFI+ +
Sbjct: 125 RRS---LLAKDLTKTCEFIVHS 143
>UNIPROTKB|A6QLW5 [details] [associations]
symbol:DSCR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0030904 "retromer
complex" evidence=IEA] [GO:0007034 "vacuolar transport"
evidence=IEA] InterPro:IPR005377 Pfam:PF03643 GO:GO:0005634
GO:GO:0007034 GO:GO:0030904 eggNOG:NOG321080 OMA:DSVQHQG
HOGENOM:HOG000294089 HOVERGEN:HBG051411
GeneTree:ENSGT00390000009324 OrthoDB:EOG4DV5MN EMBL:DAAA02003581
EMBL:DAAA02003582 EMBL:DAAA02003583 EMBL:BC148109 IPI:IPI00843710
UniGene:Bt.6631 Ensembl:ENSBTAT00000050520 InParanoid:A6QLW5
Uniprot:A6QLW5
Length = 292
Score = 430 (156.4 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 77/117 (65%), Positives = 98/117 (83%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITP++L N +++ +P+F I GHL+ST C + +P TGE+V+E +E IKS+ELQL
Sbjct: 149 PVDFTITPDTLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQL 208
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
VRVETCGCAEGY+RDATEIQNIQI +G+V G+ IPIYMVFPRLFTCPTL T+NFK+
Sbjct: 209 VRVETCGCAEGYARDATEIQNIQIADGDVCRGLSIPIYMVFPRLFTCPTLETTNFKV 265
Score = 229 (85.7 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 43/82 (52%), Positives = 60/82 (73%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCEL 253
S KPIQ+++ +E+ GK P G T+IPFE PL K N+ L+ETYHGVFVN+QY L+C++
Sbjct: 60 SVKPIQVINSTIEMVKPGKFPGGKTEIPFEFPLHVKSNKVLYETYHGVFVNIQYTLRCDM 119
Query: 254 KRSHFNILSKDLQKINEFILEN 275
+RS +L+KDL K EFI+ +
Sbjct: 120 RRS---LLAKDLTKTCEFIVHS 138
>UNIPROTKB|F1SGV6 [details] [associations]
symbol:DSCR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030904 "retromer
complex" evidence=IEA] [GO:0007034 "vacuolar transport"
evidence=IEA] InterPro:IPR005377 Pfam:PF03643 GO:GO:0005634
GO:GO:0007034 GO:GO:0030904 OMA:DSVQHQG
GeneTree:ENSGT00390000009324 EMBL:CU862004 RefSeq:XP_003483406.1
Ensembl:ENSSSCT00000013195 GeneID:100738307 KEGG:ssc:100738307
Uniprot:F1SGV6
Length = 297
Score = 423 (154.0 bits), Expect = 2.5e-61, Sum P(2) = 2.5e-61
Identities = 75/117 (64%), Positives = 97/117 (82%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITP++L N +++ +P+F I GHL+ST C + +P TGE+V+E +E IKS+ELQL
Sbjct: 154 PVDFTITPDTLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQL 213
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
VRVETCGCAEGY+RDATEIQNIQI +G+V + +PIYMVFPRLFTCPTL T+NFK+
Sbjct: 214 VRVETCGCAEGYARDATEIQNIQIADGDVCRSLSVPIYMVFPRLFTCPTLETTNFKV 270
Score = 233 (87.1 bits), Expect = 2.5e-61, Sum P(2) = 2.5e-61
Identities = 45/82 (54%), Positives = 61/82 (74%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCEL 253
S KPIQ+++ +E+A GK PSG T+IPFE PL K + L+ETYHGVFVN+QY L+C++
Sbjct: 65 SVKPIQIINSTVEMAKPGKFPSGKTEIPFEFPLHVKGTKVLYETYHGVFVNIQYTLRCDM 124
Query: 254 KRSHFNILSKDLQKINEFILEN 275
KRS +L+KDL K EFI+ +
Sbjct: 125 KRS---LLAKDLTKTCEFIVHS 143
>FB|FBgn0032726 [details] [associations]
symbol:CG10621 species:7227 "Drosophila melanogaster"
[GO:0016205 "selenocysteine methyltransferase activity"
evidence=ISS] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:AE014134 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 KO:K00547 OMA:ACETIPC GeneTree:ENSGT00510000049619
FlyBase:FBgn0032726 ChiTaRS:CG10621 EMBL:BT030804
RefSeq:NP_609920.1 UniGene:Dm.10781 SMR:Q9VJ32 IntAct:Q9VJ32
MINT:MINT-853631 EnsemblMetazoa:FBtr0081191 GeneID:35152
KEGG:dme:Dmel_CG10621 UCSC:CG10621-RA InParanoid:Q9VJ32
GenomeRNAi:35152 NextBio:792122 Uniprot:Q9VJ32
Length = 331
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 127/314 (40%), Positives = 190/314 (60%)
Query: 281 DGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQAS 340
DGGF +Q++ HVG D+V +PLW + F +N A+I TH D+++ G DI+ TNTYQ+S
Sbjct: 10 DGGFGTQMTVHVG-DSVD--GDPLWSARFNATNPAAIISTHLDFLQNGADIILTNTYQSS 66
Query: 341 VEGFVQHLGLSEDQSVQLIRDAVKYV---KEAIALE-EKRDPAIASRHVRVAGSLGSYGA 396
V+G++++L L E+QS++LI++ V+ KE E + ++ + + S+G +GA
Sbjct: 67 VDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQLSVQEGYPLIIASIGPFGA 126
Query: 397 FLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELI-K 455
LHDGSEY G Y D +E+ D+HR RIEA ++ G+D LAIET+P Q EA L E++
Sbjct: 127 HLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEMLCD 186
Query: 456 EYPGLKAWISFSCKDEKHTCHGDKFGLIAR---DVYAKNPAQ--LVAVGVNCLAPHYVES 510
+YP +K W++F CKDE HG+ F A D+ A+ AQ +A+GVNC+ P +V
Sbjct: 187 DYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAIGVNCVHPKFVTP 246
Query: 511 LLTS------AGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGG 564
L S G +PL+ PNSGE +D W ++ + YVP W G K +GG
Sbjct: 247 LFKSLNGDREVGEQIPLVVYPNSGEVYDVVNG-WQGREHCVPLANYVPEWAQLGAKVIGG 305
Query: 565 CCRTNADDMKNVNQ 578
CCRT A D++++ +
Sbjct: 306 CCRTYARDIRHIGE 319
Score = 361 (132.1 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 75/186 (40%), Positives = 115/186 (61%)
Query: 1 ASVEGFVQHLGLSEDQSVQLIRDAVKYV---KEAIVLE-EKRDPAIASRHVRVAGSLGSY 56
+SV+G++++L L E+QS++LI++ V+ KE + E + ++ + + S+G +
Sbjct: 65 SSVDGYMEYLELDEEQSIELIKNTVRLAHIAKERYLTECYQAQLSVQEGYPLIIASIGPF 124
Query: 57 GAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELI 116
GA LHDGSEY G Y D +E+ D+HR RIEA ++ G+D LAIET+P Q EA L E++
Sbjct: 125 GAHLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEAGVDALAIETIPCQMEAEALVEML 184
Query: 117 -KEYPGLKAWISFSCKDEKHTCHGDKFGLIAR---DVYAKNPAQ--LVAVGVNCLAPHYV 170
+YP +K W++F CKDE HG+ F A D+ A+ AQ +A+GVNC+ P +V
Sbjct: 185 CDDYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKCLAIGVNCVHPKFV 244
Query: 171 ESLLTS 176
L S
Sbjct: 245 TPLFKS 250
>MGI|MGI:1206040 [details] [associations]
symbol:Dscr3 "Down syndrome critical region gene 3"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030904
"retromer complex" evidence=IEA] InterPro:IPR005377 Pfam:PF03643
MGI:MGI:1206040 GO:GO:0005634 GO:GO:0007034 GO:GO:0030904
eggNOG:NOG321080 OMA:DSVQHQG CTD:10311 HOGENOM:HOG000294089
HOVERGEN:HBG051411 EMBL:AB001990 EMBL:AK077485 EMBL:AK077628
EMBL:BC003740 IPI:IPI00126499 PIR:JC5699 RefSeq:NP_031860.1
UniGene:Mm.7472 ProteinModelPortal:O35075 STRING:O35075
PhosphoSite:O35075 PaxDb:O35075 PRIDE:O35075
Ensembl:ENSMUST00000023615 GeneID:13185 KEGG:mmu:13185
GeneTree:ENSGT00390000009324 InParanoid:O35075 OrthoDB:EOG4DV5MN
NextBio:283304 Bgee:O35075 CleanEx:MM_DSCR3 Genevestigator:O35075
GermOnline:ENSMUSG00000022898 Uniprot:O35075
Length = 297
Score = 423 (154.0 bits), Expect = 3.5e-60, Sum P(2) = 3.5e-60
Identities = 72/117 (61%), Positives = 99/117 (84%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITPE+L N +++ ++P+F I GHL+ST C++ +P TGE+V+E ++ I+S+ELQL
Sbjct: 154 PVDFTITPETLQNVKERASLPKFFIRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQL 213
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
VRVETCGCAEGY+RDATEIQNIQI +G++ + +P+YMVFPRLFTCPTL T+NFK+
Sbjct: 214 VRVETCGCAEGYARDATEIQNIQIADGDICRNLSVPLYMVFPRLFTCPTLETTNFKV 270
Score = 222 (83.2 bits), Expect = 3.5e-60, Sum P(2) = 3.5e-60
Identities = 41/82 (50%), Positives = 62/82 (75%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCEL 253
S KPIQ+++ +++ GK+PSG T++PFE PL K ++ L+ETYHGVFVN+QY L+C++
Sbjct: 65 SVKPIQIINSTIDVLKPGKIPSGKTEVPFEFPLLVKGSKVLYETYHGVFVNIQYTLRCDM 124
Query: 254 KRSHFNILSKDLQKINEFILEN 275
+RS +L+KDL K EFI+ +
Sbjct: 125 RRS---LLAKDLTKTCEFIVHS 143
>FB|FBgn0032727 [details] [associations]
symbol:CG10623 species:7227 "Drosophila melanogaster"
[GO:0016205 "selenocysteine methyltransferase activity"
evidence=ISS] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:AE014134 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 HSSP:Q93088 OMA:YQSSVEG
GeneTree:ENSGT00510000049619 OrthoDB:EOG45MKN1 EMBL:AY118872
EMBL:AM294641 EMBL:AM294643 EMBL:AM294645 EMBL:AM294646
EMBL:FM245789 EMBL:FM245791 RefSeq:NP_609921.1 UniGene:Dm.13519
MINT:MINT-923852 EnsemblMetazoa:FBtr0081190 GeneID:35153
KEGG:dme:Dmel_CG10623 UCSC:CG10623-RA FlyBase:FBgn0032727
InParanoid:Q9VJ31 GenomeRNAi:35153 NextBio:792127 Uniprot:Q9VJ31
Length = 331
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 134/321 (41%), Positives = 192/321 (59%)
Query: 282 GGFSSQLSKHVGEDNVTEK-D-NPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQA 339
GGFSSQL+K NVTEK D +PLW S F +N +AVI TH D++R G DI+ TNTYQ+
Sbjct: 19 GGFSSQLAK-----NVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQS 73
Query: 340 SVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIA--LEEKRDPAIASRHVRVAGSLGSYGAF 397
SVEGFV++LG++ ++ V+LI+ +V+ K+A L E A ++ + + GS+G YGA+
Sbjct: 74 SVEGFVKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPL-IMGSIGPYGAY 132
Query: 398 LHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE- 456
LHDGSEY G+Y D + +EL +H+ RIE + G+D LA+ETLP EA + EL+ +
Sbjct: 133 LHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDN 192
Query: 457 YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYA-----KNPAQLVAVGVNCLAPHYVESL 511
+P K W+S C DEKH G+ F A ++ K +L+ +G+NC+ P +V L
Sbjct: 193 FPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPL 252
Query: 512 LTS----AGRD-VPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGGCC 566
L+S AG D +PL+ N GE +D Q W V +VP W+ GV+ VGGCC
Sbjct: 253 LSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGE--EVVKFVPEWIQLGVRIVGGCC 310
Query: 567 RTNADDMKNVNQVPVKFSITP 587
R D+ + + +I P
Sbjct: 311 RVYPTDVLAIRKYVDGLNIKP 331
Score = 342 (125.4 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 75/196 (38%), Positives = 118/196 (60%)
Query: 1 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAI--VLEEKRDPAIASRHVRVAGSLGSYGA 58
+SVEGFV++LG++ ++ V+LI+ +V+ K+A L E A ++ + + GS+G YGA
Sbjct: 73 SSVEGFVKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPL-IMGSIGPYGA 131
Query: 59 FLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE 118
+LHDGSEY G+Y D + +EL +H+ RIE + G+D LA+ETLP EA + EL+ +
Sbjct: 132 YLHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLD 191
Query: 119 -YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYA-----KNPAQLVAVGVNCLAPHYVES 172
+P K W+S C DEKH G+ F A ++ K +L+ +G+NC+ P +V
Sbjct: 192 NFPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTP 251
Query: 173 LLTSAEVEGQSLELPV 188
LL+S S +P+
Sbjct: 252 LLSSLTKVAGSDRIPL 267
>ZFIN|ZDB-GENE-030131-9545 [details] [associations]
symbol:zgc:172121 "zgc:172121" species:7955 "Danio
rerio" [GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
ZFIN:ZDB-GENE-030131-9545 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GeneTree:ENSGT00510000049619 EMBL:AL928701
IPI:IPI00934771 Ensembl:ENSDART00000043496 Bgee:F1RAY3
Uniprot:F1RAY3
Length = 311
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 120/314 (38%), Positives = 183/314 (58%)
Query: 273 LENKLYLIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIV 332
+++ +++DGG +++L + +PLW + LH++ QA+ D H Y+++G D++
Sbjct: 5 MDSSPFILDGGLATELEA----SGFQLQGDPLWSARVLHTDSQAIKDVHYRYLQSGSDVI 60
Query: 333 TTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLG 392
TT TYQAS+EGFV++LG+ +++ ++ AV+ KE ++ + P R VAGS+G
Sbjct: 61 TTATYQASIEGFVKYLGVQPEEAQHMMMSAVQLAKETVSEFISQSPMSDRREPLVAGSVG 120
Query: 393 SYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAE 452
YG+FLHDGSEY G Y D T +EL D+HRP+I+ L++ G DL+A+ET+P +EA L E
Sbjct: 121 PYGSFLHDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVE 180
Query: 453 LIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLL 512
++KE+P KAW+SFSCKD G +F A QLVAVGVNC V+ LL
Sbjct: 181 VLKEFPETKAWLSFSCKDNNSISSGRRFSEAVE--MACRSTQLVAVGVNCCPALLVKPLL 238
Query: 513 TSAGR----DVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGGCCRT 568
SA D+ + PNSGE +D W + + + W G ++GGCCR
Sbjct: 239 ESAKSHKRADLSWVVYPNSGEGWDVTTG-WKTEMRTSFANLSL-EWKAQGALWIGGCCRV 296
Query: 569 NADDMKNVNQVPVK 582
D+ + Q+ V+
Sbjct: 297 RPADITELKQLHVQ 310
Score = 395 (144.1 bits), Expect = 5.0e-36, P = 5.0e-36
Identities = 81/178 (45%), Positives = 112/178 (62%)
Query: 1 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIVLEEKRDPAIASRHVRVAGSLGSYGAFL 60
AS+EGFV++LG+ +++ ++ AV+ KE + + P R VAGS+G YG+FL
Sbjct: 67 ASIEGFVKYLGVQPEEAQHMMMSAVQLAKETVSEFISQSPMSDRREPLVAGSVGPYGSFL 126
Query: 61 HDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYP 120
HDGSEY G Y D T +EL D+HRP+I+ L++ G DL+A+ET+P +EA L E++KE+P
Sbjct: 127 HDGSEYTGAYEDKMTVEELKDWHRPQIQCLVKAGADLVAMETIPGLKEAEALVEVLKEFP 186
Query: 121 GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTSAE 178
KAW+SFSCKD G +F A QLVAVGVNC V+ LL SA+
Sbjct: 187 ETKAWLSFSCKDNNSISSGRRFSEAVE--MACRSTQLVAVGVNCCPALLVKPLLESAK 242
>FB|FBgn0037017 [details] [associations]
symbol:CG4074 species:7227 "Drosophila melanogaster"
[GO:0030904 "retromer complex" evidence=IEA] [GO:0007034 "vacuolar
transport" evidence=IEA] InterPro:IPR005377 Pfam:PF03643
EMBL:AE014296 GO:GO:0007034 GO:GO:0030904 eggNOG:NOG321080
OMA:DSVQHQG GeneTree:ENSGT00390000009324 EMBL:BT023306
RefSeq:NP_649249.1 UniGene:Dm.24022 SMR:Q9VPC3
EnsemblMetazoa:FBtr0078280 GeneID:40290 KEGG:dme:Dmel_CG4074
UCSC:CG4074-RA FlyBase:FBgn0037017 InParanoid:Q9VPC3
OrthoDB:EOG4Q83D7 GenomeRNAi:40290 NextBio:818005 Uniprot:Q9VPC3
Length = 295
Score = 376 (137.4 bits), Expect = 5.6e-51, Sum P(2) = 5.6e-51
Identities = 74/130 (56%), Positives = 97/130 (74%)
Query: 570 ADDMKNVNQVPVKFSITPESL---TNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIE 626
++D K V VP FS++P+SL +A+++ ++PRF I+G LD +E V P TG I ++
Sbjct: 130 SEDSKKV--VP--FSLSPDSLQKNASAKERLSMPRFLITGRLDRSEFCVTTPITGSITVQ 185
Query: 627 QTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTC 686
TE IKS+E+QLVRVETCGC EGYS+DATEIQ IQI +GNV + +PI+MV PRLFTC
Sbjct: 186 HTEAAIKSIEMQLVRVETCGCDEGYSKDATEIQTIQIADGNVLPKLELPIHMVLPRLFTC 245
Query: 687 PTLITSNFKI 696
PTL+T NFKI
Sbjct: 246 PTLLTKNFKI 255
Score = 185 (70.2 bits), Expect = 5.6e-51, Sum P(2) = 5.6e-51
Identities = 41/84 (48%), Positives = 52/84 (61%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPN-RSLFETYHGVFVNVQYNLKCE 252
S KPI LL LEL+A GK+ +G ++ FE PL K R L+ETYHGVF+NV Y L C
Sbjct: 45 SVKPINLLQNSLELSAPGKLSAGRSEFHFELPLVCKKEPRILYETYHGVFINVNYQLTCT 104
Query: 253 LKRSHFNILSKDLQKINEFILENK 276
+KR N L K KI +F ++ K
Sbjct: 105 VKR---NFLGKATTKIQQFCVQYK 125
>UNIPROTKB|Q4VNK0 [details] [associations]
symbol:SMT "Selenocysteine Se-methyltransferase"
species:36774 "Brassica oleracea var. italica" [GO:0010269
"response to selenium ion" evidence=IDA] [GO:0016205
"selenocysteine methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IDA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 GO:GO:0046872 GO:GO:0010269
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:AY817737
BioCyc:MetaCyc:MONOMER-15249 GO:GO:0016205 Uniprot:Q4VNK0
Length = 346
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 118/333 (35%), Positives = 190/333 (57%)
Query: 259 NILSKDLQKINEFILENKLY-LIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAV 317
N ++ + E + E Y +IDGG +++L +H G D ++PLW + L ++ +
Sbjct: 5 NTKAETFYSMKELLKETGGYAIIDGGLATELERH-GAD----LNDPLWSAKCLLTSPHLI 59
Query: 318 IDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIAL--EEK 375
H DY+ AG DI+++ +YQA+++GF + G S ++S L+R +V+ EA + ++
Sbjct: 60 HTVHLDYLEAGADIISSASYQATIQGF-EAKGYSIEKSESLLRKSVEIACEARSTYYDKC 118
Query: 376 RDP----AIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQG 431
+D + R + VA S+GSYGAFL DGSEY G Y D T + L D+HR R++ L +
Sbjct: 119 KDDDDKKILKKRPILVAASVGSYGAFLADGSEYSGIYGDLITLETLKDFHRRRVQVLAES 178
Query: 432 GIDLLAIETLPAQEEAMVLAELIKE-YPGLKAWISFSCKDEKHTCHGDKFG-LIARDVYA 489
G D++A ET+P + EA AEL+ E + W SF+ KD + GD IA A
Sbjct: 179 GADIIAFETIPNKLEAQAFAELLDEGVAKIPGWFSFNSKDGVNVVSGDSIKECIA---IA 235
Query: 490 KNPAQLVAVGVNCLAPHYVESLLTSAGR--DVPLLCCPNSGETFDPGQRIWMNKDSVPSV 547
+ ++VAVG+NC P ++E L+ + P+L PNSGE +DP ++ W+ V +
Sbjct: 236 EACEKVVAVGINCTPPRFIEGLVLEIAKVTSKPILVYPNSGERYDPERKEWVENTGVGNE 295
Query: 548 D--TYVPRWLDTGVKYVGGCCRTNADDMKNVNQ 578
D +YV +W+D GV +GGCCRT ++ +++
Sbjct: 296 DFVSYVEKWMDAGVSLLGGCCRTTPTTIRAIHK 328
Score = 278 (102.9 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 72/193 (37%), Positives = 109/193 (56%)
Query: 1 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEA--IVLEEKRDP----AIASRHVRVAGSLG 54
A+++GF + G S ++S L+R +V+ EA ++ +D + R + VA S+G
Sbjct: 81 ATIQGF-EAKGYSIEKSESLLRKSVEIACEARSTYYDKCKDDDDKKILKKRPILVAASVG 139
Query: 55 SYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAE 114
SYGAFL DGSEY G Y D T + L D+HR R++ L + G D++A ET+P + EA AE
Sbjct: 140 SYGAFLADGSEYSGIYGDLITLETLKDFHRRRVQVLAESGADIIAFETIPNKLEAQAFAE 199
Query: 115 LIKE-YPGLKAWISFSCKDEKHTCHGDKFG-LIARDVYAKNPAQLVAVGVNCLAPHYVES 172
L+ E + W SF+ KD + GD IA A+ ++VAVG+NC P ++E
Sbjct: 200 LLDEGVAKIPGWFSFNSKDGVNVVSGDSIKECIA---IAEACEKVVAVGINCTPPRFIEG 256
Query: 173 L-LTSAEVEGQSL 184
L L A+V + +
Sbjct: 257 LVLEIAKVTSKPI 269
>UNIPROTKB|Q58DN0 [details] [associations]
symbol:DSCR3 "Down syndrome critical region protein 3"
species:9913 "Bos taurus" [GO:0030904 "retromer complex"
evidence=IEA] [GO:0007034 "vacuolar transport" evidence=IEA]
InterPro:IPR005377 Pfam:PF03643 GO:GO:0007034 GO:GO:0030904
CTD:10311 HOGENOM:HOG000294089 HOVERGEN:HBG051411
GeneTree:ENSGT00390000009324 EMBL:DAAA02003581 EMBL:DAAA02003582
EMBL:DAAA02003583 UniGene:Bt.6631 EMBL:BT021567 IPI:IPI00714351
RefSeq:NP_001035600.2 Ensembl:ENSBTAT00000006292 GeneID:507647
KEGG:bta:507647 NextBio:20868157 Uniprot:Q58DN0
Length = 262
Score = 321 (118.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 58/96 (60%), Positives = 76/96 (79%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITP++L N +++ +P+F I GHL+ST C + +P TGE+V+E +E IKS+ELQL
Sbjct: 154 PVDFTITPDTLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIKSIELQL 213
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIP 675
VRVETCGCAEGY+RDATEIQNIQI +G+V P P
Sbjct: 214 VRVETCGCAEGYARDATEIQNIQIADGDVCRASPSP 249
Score = 229 (85.7 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 43/82 (52%), Positives = 60/82 (73%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCEL 253
S KPIQ+++ +E+ GK P G T+IPFE PL K N+ L+ETYHGVFVN+QY L+C++
Sbjct: 65 SVKPIQVINSTIEMVKPGKFPGGKTEIPFEFPLHVKSNKVLYETYHGVFVNIQYTLRCDM 124
Query: 254 KRSHFNILSKDLQKINEFILEN 275
+RS +L+KDL K EFI+ +
Sbjct: 125 RRS---LLAKDLTKTCEFIVHS 143
>DICTYBASE|DDB_G0292212 [details] [associations]
symbol:vps26l "vacuolar protein sorting-associated
protein 26 family protein" species:44689 "Dictyostelium discoideum"
[GO:0030904 "retromer complex" evidence=IEA] [GO:0007034 "vacuolar
transport" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005377 Pfam:PF03643
dictyBase:DDB_G0292212 GO:GO:0007034 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0030904 EMBL:AAFI02000188 RefSeq:XP_629739.1
ProteinModelPortal:Q54DI8 PRIDE:Q54DI8 EnsemblProtists:DDB0267115
GeneID:8628568 KEGG:ddi:DDB_G0292212 eggNOG:NOG321080 OMA:DSVQHQG
ProtClustDB:CLSZ2429449 Uniprot:Q54DI8
Length = 304
Score = 341 (125.1 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 66/126 (52%), Positives = 89/126 (70%)
Query: 573 MKNVNQVPVKFSITPESLTNAR--DKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTEL 630
MK+ + + F+ITP+SL N + K ++P F+ISG L S C++ F G ++IE +
Sbjct: 153 MKSTPESLITFNITPDSLVNFKKISKADVPTFKISGGLVSAICNINEAFQGHMIIESADT 212
Query: 631 PIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLI 690
IKSVELQLVRVETCGCA+GY+R+ TEIQNIQI +G+++ IP+YMVFPRLFTC +
Sbjct: 213 VIKSVELQLVRVETCGCADGYAREVTEIQNIQIADGDIWRNFKIPLYMVFPRLFTCISTA 272
Query: 691 TSNFKI 696
FKI
Sbjct: 273 GKTFKI 278
Score = 207 (77.9 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 46/109 (42%), Positives = 69/109 (63%)
Query: 194 SRKPIQLLSIELELA-AAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCE 252
S KPI L+ + + GK +G T++PFE L+ PN+ L++TYHGVFVN+QY++KC+
Sbjct: 65 SLKPITLMHYTISVTNGGGKFQAGITELPFEFTLEPLPNQQLYDTYHGVFVNIQYSIKCD 124
Query: 253 LKRSHFNILSKDLQKINEFILE----NKLYLIDGGFSSQLSKHVGEDNV 297
+KR ILSKDL K EFI+E NK L+ S ++ ++ D++
Sbjct: 125 VKRG---ILSKDLSKTIEFIVEVPSQNKEVLMKSTPESLITFNITPDSL 170
>TAIR|locus:2077234 [details] [associations]
symbol:HMT2 "homocysteine methyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA;ISS;IDA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA;IDA] [GO:0033528
"S-methylmethionine cycle" evidence=IMP] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006260 "DNA replication" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0009086 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 EMBL:AL138648 eggNOG:COG2040 HOGENOM:HOG000265278
KO:K00547 ProtClustDB:PLN02489 EMBL:AF219223 EMBL:AF428402
EMBL:BT010165 IPI:IPI00534315 PIR:T48114 PIR:T51939
RefSeq:NP_191884.1 UniGene:At.21554 ProteinModelPortal:Q9M1W4
SMR:Q9M1W4 STRING:Q9M1W4 PaxDb:Q9M1W4 PRIDE:Q9M1W4 DNASU:825500
EnsemblPlants:AT3G63250.1 GeneID:825500 KEGG:ath:AT3G63250
TAIR:At3g63250 InParanoid:Q9M1W4 OMA:YQSSVEG PhylomeDB:Q9M1W4
Genevestigator:Q9M1W4 GO:GO:0033528 Uniprot:Q9M1W4
Length = 333
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 113/325 (34%), Positives = 187/325 (57%)
Query: 268 INEFILENKLY-LIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVR 326
+ +F+ + Y +IDGG +++ +H G D ++PLW + L ++ + H DY+
Sbjct: 9 MKDFLKQTGGYAVIDGGLATEFERH-GAD----LNDPLWSAKCLVTSPHLIHTVHLDYLE 63
Query: 327 AGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAI-ALEEK-------RDP 378
AG DI+++ +YQA+++GF + G S ++S L++ +V+ EA + +K D
Sbjct: 64 AGADIISSASYQATIQGF-EAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDK 122
Query: 379 AIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAI 438
+ R + VA S+GSYGA+L DGSEY G Y DS T ++L D+HR R++ L + G DL+A
Sbjct: 123 ILKKRPILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAF 182
Query: 439 ETLPAQEEAMVLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVA 497
ET+P + EA A+L++E + W SF+ KD + GD A+N ++VA
Sbjct: 183 ETIPNKIEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECIS--IAENCEKVVA 240
Query: 498 VGVNCLAPHYVESLLTSAGR--DVPLLCCPNSGETFDPGQRIWMNKDSVPSVD--TYVPR 553
VG+NC P ++E L+ + P+L PNSGE++D ++ W+ V D +YV +
Sbjct: 241 VGINCTPPRFIEGLVLEIEKVTSKPILVYPNSGESYDADRKEWVENTGVGDEDFVSYVEK 300
Query: 554 WLDTGVKYVGGCCRTNADDMKNVNQ 578
W+D GV +GGCCRT ++ +++
Sbjct: 301 WMDAGVSLLGGCCRTTPTTIRAIHK 325
Score = 289 (106.8 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 68/187 (36%), Positives = 104/187 (55%)
Query: 1 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAI--------VLEEKRDPAIASRHVRVAGS 52
A+++GF + G S ++S L++ +V+ EA D + R + VA S
Sbjct: 76 ATIQGF-EAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRPILVAAS 134
Query: 53 LGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVL 112
+GSYGA+L DGSEY G Y DS T ++L D+HR R++ L + G DL+A ET+P + EA
Sbjct: 135 VGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAF 194
Query: 113 AELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVE 171
A+L++E + W SF+ KD + GD A+N ++VAVG+NC P ++E
Sbjct: 195 ADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECIS--IAENCEKVVAVGINCTPPRFIE 252
Query: 172 SLLTSAE 178
L+ E
Sbjct: 253 GLVLEIE 259
>TAIR|locus:2094419 [details] [associations]
symbol:HMT3 "homocysteine S-methyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009086 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
EMBL:AB022223 eggNOG:COG2040 HOGENOM:HOG000265278 KO:K00547
ProtClustDB:PLN02489 EMBL:AF297394 EMBL:AK118021 EMBL:BT005318
EMBL:AY087554 IPI:IPI00516296 RefSeq:NP_566715.1 UniGene:At.6305
ProteinModelPortal:Q8LAX0 SMR:Q8LAX0 STRING:Q8LAX0 PaxDb:Q8LAX0
PRIDE:Q8LAX0 EnsemblPlants:AT3G22740.1 GeneID:821845
KEGG:ath:AT3G22740 TAIR:At3g22740 InParanoid:Q8LAX0 OMA:ACETIPC
PhylomeDB:Q8LAX0 Genevestigator:Q8LAX0 GermOnline:AT3G22740
Uniprot:Q8LAX0
Length = 347
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 114/316 (36%), Positives = 178/316 (56%)
Query: 279 LIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQ 338
++DGGF+++L +H + N +PLW + L ++ V H DY+ +G +I+ T +YQ
Sbjct: 25 VVDGGFATELQRHGADIN-----DPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQ 79
Query: 339 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKR------DPAIAS----RHVRVA 388
A+++GFV GLS ++ L+R +V+ EA + R D A A R + VA
Sbjct: 80 ATIQGFVAK-GLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRPILVA 138
Query: 389 GSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAM 448
S+GSYGA+L DGSEY G Y DS + + L D+HR R++ L + G DL+A ET+P + EA
Sbjct: 139 ASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAE 198
Query: 449 VLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHY 507
A+L++E + AW SF+ KD GD A+ A + +VA+G+NC AP Y
Sbjct: 199 AYADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAK--VADSCKNVVAIGINCTAPRY 256
Query: 508 VESLLTSAGRDV--PLLCCPNSGETFDPGQRIWMNKDSVPSVD--TYVPRWLDTGVKYVG 563
+ +L+ S + P++ PNSGE +D + W+ + D +YV +W D G G
Sbjct: 257 IHALIISLRQMTRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDFVSYVSKWRDAGASLFG 316
Query: 564 GCCRTNADDMKNVNQV 579
GCCRT + ++ + +V
Sbjct: 317 GCCRTTPNTIRAIAKV 332
Score = 287 (106.1 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 73/187 (39%), Positives = 107/187 (57%)
Query: 1 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIVLEEKR------DPAIAS----RHVRVA 50
A+++GFV GLS ++ L+R +V+ EA + R D A A R + VA
Sbjct: 80 ATIQGFVAK-GLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRPILVA 138
Query: 51 GSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAM 110
S+GSYGA+L DGSEY G Y DS + + L D+HR R++ L + G DL+A ET+P + EA
Sbjct: 139 ASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAE 198
Query: 111 VLAELIKEYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHY 169
A+L++E + AW SF+ KD GD A+ A + +VA+G+NC AP Y
Sbjct: 199 AYADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAK--VADSCKNVVAIGINCTAPRY 256
Query: 170 VESLLTS 176
+ +L+ S
Sbjct: 257 IHALIIS 263
>UNIPROTKB|Q47690 [details] [associations]
symbol:mmuM species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0032259 "methylation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] [GO:0009086 "methionine biosynthetic
process" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006974 EMBL:U70214
GO:GO:0009086 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
eggNOG:COG2040 HOGENOM:HOG000265278 KO:K00547 OMA:ACETIPC
PIR:E64751 RefSeq:NP_414795.1 RefSeq:YP_488556.1
ProteinModelPortal:Q47690 SMR:Q47690 IntAct:Q47690
EnsemblBacteria:EBESCT00000001025 EnsemblBacteria:EBESCT00000018250
GeneID:12930783 GeneID:946143 KEGG:ecj:Y75_p0252 KEGG:eco:b0261
PATRIC:32115641 EcoGene:EG13343 ProtClustDB:PRK09485
BioCyc:EcoCyc:MMUM-MONOMER BioCyc:ECOL316407:JW0253-MONOMER
BioCyc:MetaCyc:MMUM-MONOMER Genevestigator:Q47690 Uniprot:Q47690
Length = 310
Score = 470 (170.5 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 115/302 (38%), Positives = 162/302 (53%)
Query: 277 LYLIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNT 336
+ L+DG +++L G N+ + LW + L N + + + H DY RAG T +
Sbjct: 16 ILLLDGAMATELEAR-G-CNLADS---LWSAKVLVENPELIREVHLDYYRAGAQCAITAS 70
Query: 337 YQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGA 396
YQA+ GF GL E QS LI +V+ ++A +P + + VAGS+G YGA
Sbjct: 71 YQATPAGFAAR-GLDEAQSKALIGKSVELARKAREAYLAENPQAGT--LLVAGSVGPYGA 127
Query: 397 FLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKE 456
+L DGSEYRGDY S + +HRPR+EAL+ G DLLA ETLP E LAEL+
Sbjct: 128 YLADGSEYRGDYHCSVEAFQA--FHRPRVEALLDAGADLLACETLPNFSEIEALAELLTA 185
Query: 457 YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYA--KNPAQLVAVGVNCLAPHYVESLLTS 514
YP +AW SF+ +D +H G RDV A Q+VA+G+NC+A + L
Sbjct: 186 YPRARAWFSFTLRDSEHLSDGTPL----RDVVALLAGYPQVVALGINCIALENTTAALQH 241
Query: 515 A-GRDV-PLLCCPNSGETFDPGQRIWMNK-DSVPSVDTYVPRWLDTGVKYVGGCCRTNAD 571
G V PL+ PNSGE +D + W + + + Y+P+W G + +GGCCRT
Sbjct: 242 LHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPA 301
Query: 572 DM 573
D+
Sbjct: 302 DI 303
Score = 295 (108.9 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 73/168 (43%), Positives = 96/168 (57%)
Query: 1 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIVLEEKRDPAIASRHVRVAGSLGSYGAFL 60
A+ GF GL E QS LI +V+ ++A +P + + VAGS+G YGA+L
Sbjct: 73 ATPAGFAAR-GLDEAQSKALIGKSVELARKAREAYLAENPQAGT--LLVAGSVGPYGAYL 129
Query: 61 HDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYP 120
DGSEYRGDY S + +HRPR+EAL+ G DLLA ETLP E LAEL+ YP
Sbjct: 130 ADGSEYRGDYHCSVEAFQA--FHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYP 187
Query: 121 GLKAWISFSCKDEKHTCHGDKFGLIARDVYA--KNPAQLVAVGVNCLA 166
+AW SF+ +D +H G RDV A Q+VA+G+NC+A
Sbjct: 188 RARAWFSFTLRDSEHLSDGTPL----RDVVALLAGYPQVVALGINCIA 231
>TAIR|locus:2092120 [details] [associations]
symbol:HMT-1 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA;ISS;IDA] [GO:0009086
"methionine biosynthetic process" evidence=IDA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AB023041 GO:GO:0046872 GO:GO:0009086
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:AF219222
EMBL:AY065163 EMBL:AY081604 IPI:IPI00527423 PIR:T51941
RefSeq:NP_189219.1 UniGene:At.23868 ProteinModelPortal:Q9SDL7
SMR:Q9SDL7 IntAct:Q9SDL7 STRING:Q9SDL7 PRIDE:Q9SDL7
EnsemblPlants:AT3G25900.1 GeneID:822186 KEGG:ath:AT3G25900
TAIR:At3g25900 eggNOG:COG2040 HOGENOM:HOG000265278
InParanoid:Q9SDL7 KO:K00547 OMA:EGYMEYL PhylomeDB:Q9SDL7
ProtClustDB:PLN02489 Genevestigator:Q9SDL7 Uniprot:Q9SDL7
Length = 326
Score = 466 (169.1 bits), Expect = 6.1e-44, P = 6.1e-44
Identities = 105/308 (34%), Positives = 167/308 (54%)
Query: 279 LIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQ 338
++DGGF++QL H N +PLW + L N + + H +Y+ AG DIV T++YQ
Sbjct: 22 VVDGGFATQLEIHGAAIN-----DPLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQ 76
Query: 339 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAI-ALEEKRDPAIASRHVR--VAGSLGSYG 395
A++ GF+ GLS ++S L++ +V+ EA EK + R VA S+GSYG
Sbjct: 77 ATIPGFLSR-GLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAASIGSYG 135
Query: 396 AFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIK 455
A+L DGSEY G Y ++ + +L D+HR R++ L++ G DLLA ET+P + EA EL++
Sbjct: 136 AYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLE 195
Query: 456 EYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTS 514
E + AWI F+ D + G+ F + N + AVG+NC P ++E+L+
Sbjct: 196 EEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSN--NIYAVGINCAPPQFIENLIRK 253
Query: 515 AGR--DVPLLCCPNSGETFDPGQRIWMNKDSV--PSVDTYVPRWLDTGVKYVGGCCRTNA 570
+ ++ PNSGE +D + W+ + + +W D G K +GGCCRT
Sbjct: 254 FAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFATKWRDLGAKLIGGCCRTTP 313
Query: 571 DDMKNVNQ 578
+ +++
Sbjct: 314 STINAISR 321
Score = 270 (100.1 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 65/178 (36%), Positives = 101/178 (56%)
Query: 1 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIV-LEEKRDPAIASRHVR--VAGSLGSYG 57
A++ GF+ GLS ++S L++ +V+ EA EK + R VA S+GSYG
Sbjct: 77 ATIPGFLSR-GLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAASIGSYG 135
Query: 58 AFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIK 117
A+L DGSEY G Y ++ + +L D+HR R++ L++ G DLLA ET+P + EA EL++
Sbjct: 136 AYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLE 195
Query: 118 EYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLL 174
E + AWI F+ D + G+ F + N + AVG+NC P ++E+L+
Sbjct: 196 EEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSN--NIYAVGINCAPPQFIENLI 251
>ZFIN|ZDB-GENE-040801-6 [details] [associations]
symbol:dscr3 "Down syndrome critical region gene 3"
species:7955 "Danio rerio" [GO:0007034 "vacuolar transport"
evidence=IEA] [GO:0030904 "retromer complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR005377
Pfam:PF03643 ZFIN:ZDB-GENE-040801-6 GO:GO:0007034 GO:GO:0030904
eggNOG:NOG321080 OMA:DSVQHQG CTD:10311 HOGENOM:HOG000294089
HOVERGEN:HBG051411 GeneTree:ENSGT00390000009324 OrthoDB:EOG4DV5MN
EMBL:CU633885 EMBL:BC075958 IPI:IPI00512940 RefSeq:NP_001003421.1
UniGene:Dr.87036 Ensembl:ENSDART00000036375 GeneID:445026
KEGG:dre:445026 NextBio:20831787 Uniprot:Q6DHL2
Length = 297
Score = 463 (168.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 100/208 (48%), Positives = 134/208 (64%)
Query: 492 PAQLVAVGVNCLAPHYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSVD--- 548
P QLV+ + P V + T + PL N + ++ +++N D
Sbjct: 68 PIQLVSSTMEVAKPGKVPAGRTEIPFEFPLQAKGNK-QLYETYHGVFVNIQYTLRCDIRR 126
Query: 549 TYVPRWLDTGVKYVGGCCRTNADDMKNVNQVPVKFSITPESLTNARDKFNIPRFRISGHL 608
+ + + L +++ C A N PV FSITPE+L N R++ ++PRF I GHL
Sbjct: 127 SLLAKDLSKSCEFMVHCQPQKAKLQPN----PVDFSITPETLQNIRERASLPRFLIRGHL 182
Query: 609 DSTECSVVRPFTGEIVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNV 668
D+T CS+ RP +GE+V+E +E+PIKS+ELQLVRVETCGCAEGY+RDATEIQNIQI EG+V
Sbjct: 183 DATCCSITRPLSGELVVENSEVPIKSIELQLVRVETCGCAEGYARDATEIQNIQIAEGDV 242
Query: 669 FTGIPIPIYMVFPRLFTCPTLITSNFKI 696
G+ IPIYMVFPRLFTCPTL T+NFK+
Sbjct: 243 CHGLSIPIYMVFPRLFTCPTLETTNFKV 270
Score = 242 (90.2 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 46/80 (57%), Positives = 64/80 (80%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCEL 253
S KPIQL+S +E+A GK+P+G T+IPFE PL+AK N+ L+ETYHGVFVN+QY L+C++
Sbjct: 65 SVKPIQLVSSTMEVAKPGKVPAGRTEIPFEFPLQAKGNKQLYETYHGVFVNIQYTLRCDI 124
Query: 254 KRSHFNILSKDLQKINEFIL 273
+RS +L+KDL K EF++
Sbjct: 125 RRS---LLAKDLSKSCEFMV 141
>UNIPROTKB|A4ZGQ8 [details] [associations]
symbol:HMT1 "Homocysteine S-methyltransferase 1"
species:36774 "Brassica oleracea var. italica" [GO:0008898
"homocysteine S-methyltransferase activity" evidence=IDA]
[GO:0032259 "methylation" evidence=IDA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 GO:GO:0046872 GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:DQ679980
BioCyc:MetaCyc:MONOMER-15250 BRENDA:2.1.1.10 Uniprot:A4ZGQ8
Length = 326
Score = 460 (167.0 bits), Expect = 2.9e-43, P = 2.9e-43
Identities = 103/308 (33%), Positives = 167/308 (54%)
Query: 279 LIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQ 338
++DGGF++QL H N +PLW + L + + + H +Y+ AG D+V T++YQ
Sbjct: 22 VVDGGFATQLEIHGAAIN-----DPLWSAVSLIKDPELIKRVHMEYLEAGADVVVTSSYQ 76
Query: 339 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAI-ALEEKRDPAIASRHVR--VAGSLGSYG 395
A++ GF+ GLS ++S L++ +VK EA +K + R VA S+GSYG
Sbjct: 77 ATIPGFLSR-GLSMEESESLLQKSVKLAVEARDRFWDKVSKTSGHSYNRALVAASIGSYG 135
Query: 396 AFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIK 455
A+L DGSEY G Y + + +L D+HR RI+ L++ DLLA ET+P + EA EL++
Sbjct: 136 AYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLEAQACVELLE 195
Query: 456 EYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTS 514
E + AWI F+ D ++ G+ F + N + AVG+NC P ++++L+
Sbjct: 196 EENVQIPAWICFTSVDGENAPSGESFQECLETLNKSN--NICAVGINCAPPQFMDNLIRK 253
Query: 515 AGR--DVPLLCCPNSGETFDPGQRIWMNKDSVPSVD--TYVPRWLDTGVKYVGGCCRTNA 570
+ ++ PNSGE +D + W+ + + +W D G K +GGCCRT
Sbjct: 254 FSKLTQKAIVVYPNSGEVWDGKAKKWLPSQCFGDAEFEMFATKWRDLGAKLIGGCCRTTP 313
Query: 571 DDMKNVNQ 578
+K +++
Sbjct: 314 STIKAISR 321
Score = 264 (98.0 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 64/178 (35%), Positives = 100/178 (56%)
Query: 1 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIV-LEEKRDPAIASRHVR--VAGSLGSYG 57
A++ GF+ GLS ++S L++ +VK EA +K + R VA S+GSYG
Sbjct: 77 ATIPGFLSR-GLSMEESESLLQKSVKLAVEARDRFWDKVSKTSGHSYNRALVAASIGSYG 135
Query: 58 AFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIK 117
A+L DGSEY G Y + + +L D+HR RI+ L++ DLLA ET+P + EA EL++
Sbjct: 136 AYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLEAQACVELLE 195
Query: 118 EYP-GLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLL 174
E + AWI F+ D ++ G+ F + N + AVG+NC P ++++L+
Sbjct: 196 EENVQIPAWICFTSVDGENAPSGESFQECLETLNKSN--NICAVGINCAPPQFMDNLI 251
>UNIPROTKB|B7Z6B1 [details] [associations]
symbol:DSCR3 "cDNA FLJ53650, highly similar to Down
syndrome critical region protein 3" species:9606 "Homo sapiens"
[GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030904
"retromer complex" evidence=IEA] InterPro:IPR005377 Pfam:PF03643
GO:GO:0007034 GO:GO:0030904 UniGene:Hs.369488 HGNC:HGNC:3044
HOGENOM:HOG000294089 ChiTaRS:DSCR3 EMBL:AP001432 EMBL:AP001412
EMBL:AK300024 EMBL:AK316460 IPI:IPI00790720 STRING:B7Z6B1
Ensembl:ENST00000476950 UCSC:uc010gnl.2 Uniprot:B7Z6B1
Length = 270
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 76/117 (64%), Positives = 98/117 (83%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITPE+L N +++ +P+F + GHL+ST C + +P TGE+V+E +E I+SVELQL
Sbjct: 127 PVDFTITPETLQNVKERALLPKFLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQL 186
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
VRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PIYMVFPRLFTCPTL T+NFK+
Sbjct: 187 VRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKV 243
Score = 181 (68.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 42/94 (44%), Positives = 56/94 (59%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNL-KCE 252
S KPIQ+++ +E+ GK PSG T+IPFE PL K N+ L+ETYHGVFVN+Q K
Sbjct: 65 SVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKVLYETYHGVFVNIQPQKGKFT 124
Query: 253 LKRSHFNILSKDLQKINEFILENKLYLIDGGFSS 286
F I + LQ + E L K +L+ G +S
Sbjct: 125 PSPVDFTITPETLQNVKERALLPK-FLLRGHLNS 157
>UNIPROTKB|A8MY26 [details] [associations]
symbol:DSCR3 "cDNA FLJ53689, highly similar to Down
syndrome critical region protein 3" species:9606 "Homo sapiens"
[GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030904
"retromer complex" evidence=IEA] InterPro:IPR005377 Pfam:PF03643
GO:GO:0007034 GO:GO:0030904 UniGene:Hs.369488 HGNC:HGNC:3044
HOGENOM:HOG000294089 HOVERGEN:HBG051411 ChiTaRS:DSCR3 EMBL:AP001432
EMBL:AP001412 EMBL:AK303624 IPI:IPI00790030 STRING:A8MY26
Ensembl:ENST00000399001 UCSC:uc011aeh.1 Uniprot:A8MY26
Length = 172
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 76/117 (64%), Positives = 98/117 (83%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITPE+L N +++ +P+F + GHL+ST C + +P TGE+V+E +E I+SVELQL
Sbjct: 29 PVDFTITPETLQNVKERALLPKFLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQL 88
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
VRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PIYMVFPRLFTCPTL T+NFK+
Sbjct: 89 VRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKV 145
>UNIPROTKB|B7Z606 [details] [associations]
symbol:DSCR3 "cDNA FLJ59969, highly similar to Down
syndrome critical region protein 3" species:9606 "Homo sapiens"
[GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030904
"retromer complex" evidence=IEA] InterPro:IPR005377 Pfam:PF03643
GO:GO:0007034 GO:GO:0030904 UniGene:Hs.369488 HGNC:HGNC:3044
HOVERGEN:HBG051411 ChiTaRS:DSCR3 EMBL:AP001432 EMBL:AP001412
EMBL:AK299662 IPI:IPI00922353 STRING:B7Z606 Ensembl:ENST00000539844
UCSC:uc011aeg.1 Uniprot:B7Z606
Length = 220
Score = 428 (155.7 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 76/117 (64%), Positives = 98/117 (83%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITPE+L N +++ +P+F + GHL+ST C + +P TGE+V+E +E I+SVELQL
Sbjct: 77 PVDFTITPETLQNVKERALLPKFLLRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQL 136
Query: 640 VRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
VRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PIYMVFPRLFTCPTL T+NFK+
Sbjct: 137 VRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKV 193
>UNIPROTKB|E7EWN9 [details] [associations]
symbol:DSCR3 "Down syndrome critical region protein 3"
species:9606 "Homo sapiens" [GO:0007034 "vacuolar transport"
evidence=IEA] [GO:0030904 "retromer complex" evidence=IEA]
InterPro:IPR005377 Pfam:PF03643 GO:GO:0007034 GO:GO:0030904
HGNC:HGNC:3044 ChiTaRS:DSCR3 EMBL:AP001432 EMBL:AP001412
IPI:IPI00385046 ProteinModelPortal:E7EWN9 PRIDE:E7EWN9
Ensembl:ENST00000288304 ArrayExpress:E7EWN9 Bgee:E7EWN9
Uniprot:E7EWN9
Length = 253
Score = 235 (87.8 bits), Expect = 6.4e-39, Sum P(2) = 6.4e-39
Identities = 45/82 (54%), Positives = 61/82 (74%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCEL 253
S KPIQ+++ +E+ GK PSG T+IPFE PL K N+ L+ETYHGVFVN+QY L+C++
Sbjct: 23 SVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHLKGNKVLYETYHGVFVNIQYTLRCDM 82
Query: 254 KRSHFNILSKDLQKINEFILEN 275
KRS +L+KDL K EFI+ +
Sbjct: 83 KRS---LLAKDLTKTCEFIVHS 101
Score = 217 (81.4 bits), Expect = 6.4e-39, Sum P(2) = 6.4e-39
Identities = 53/121 (43%), Positives = 72/121 (59%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVV----RPFTGEIVIEQTELPIKSV 635
PV F+ITPE+L N +++ +P+F + + C R GE+ + +
Sbjct: 112 PVDFTITPETLQNVKERALLPKFLLRTSQLNKLCHHAATNGRAGGGELGSRHQKRGAAAG 171
Query: 636 ELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFK 695
VRV C Y+RDATEIQNIQI +G+V G+ +PIYMVFPRLFTCPTL T+NFK
Sbjct: 172 ARGDVRV----CR--YARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFK 225
Query: 696 I 696
+
Sbjct: 226 V 226
>RGD|1306879 [details] [associations]
symbol:Dscr3 "Down syndrome critical region gene 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0007034 "vacuolar transport" evidence=IEA]
[GO:0030904 "retromer complex" evidence=IEA] InterPro:IPR005377
Pfam:PF03643 RGD:1306879 GO:GO:0005634 GO:GO:0007034 GO:GO:0030904
OMA:DSVQHQG GeneTree:ENSGT00390000009324 IPI:IPI00763791
PRIDE:E9PU42 Ensembl:ENSRNOT00000002284 Uniprot:E9PU42
Length = 220
Score = 222 (83.2 bits), Expect = 7.9e-38, Sum P(2) = 7.9e-38
Identities = 41/82 (50%), Positives = 62/82 (75%)
Query: 194 SRKPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSLFETYHGVFVNVQYNLKCEL 253
S KPIQ+++ +++ GK+PSG T++PFE PL K ++ L+ETYHGVFVN+QY L+C++
Sbjct: 65 SVKPIQIINSTIDVLKPGKIPSGKTEVPFEFPLLVKGSKVLYETYHGVFVNIQYTLRCDM 124
Query: 254 KRSHFNILSKDLQKINEFILEN 275
+RS +L+KDL K EFI+ +
Sbjct: 125 RRS---LLAKDLTKTCEFIVHS 143
Score = 220 (82.5 bits), Expect = 7.9e-38, Sum P(2) = 7.9e-38
Identities = 37/67 (55%), Positives = 55/67 (82%)
Query: 580 PVKFSITPESLTNARDKFNIPRFRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQL 639
PV F+ITPE+L N +++ ++P+F I GHL+ST C++ +P TGE+V+E ++ I+S+ELQL
Sbjct: 154 PVDFTITPETLQNVKERASLPKFLIRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQL 213
Query: 640 VRVETCG 646
VRVETCG
Sbjct: 214 VRVETCG 220
>CGD|CAL0004923 [details] [associations]
symbol:SAM4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=IEA] [GO:0050667 "homocysteine metabolic process"
evidence=IEA] [GO:0019284 "L-methionine biosynthetic process from
S-adenosylmethionine" evidence=IEA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 CGD:CAL0004923 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 EMBL:AACQ01000177 EMBL:AACQ01000176 eggNOG:COG2040
KO:K00547 RefSeq:XP_711874.1 RefSeq:XP_711903.1 STRING:Q59QD2
GeneID:3646467 GeneID:3646506 KEGG:cal:CaO19.386
KEGG:cal:CaO19.8016 Uniprot:Q59QD2
Length = 311
Score = 401 (146.2 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 99/312 (31%), Positives = 157/312 (50%)
Query: 272 ILENKLYLIDGGFSSQLSKHVGEDNV-TEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCD 330
IL+ + +IDG ++L + + + +PLW L N + V H DY+ G D
Sbjct: 7 ILDKRKLVIDGALGTELERLLPTTSTYLPSGSPLWSGQVLIKNPELVEQVHLDYINVGAD 66
Query: 331 IVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGS 390
++ T+TYQ S +++G DQ++ L A+ K A+ + RD I +AGS
Sbjct: 67 MIITSTYQTSYASLHKYIGYDMDQAIALWNSALNVAKNAVK-KSGRDDVI------IAGS 119
Query: 391 LGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVL 450
+G Y L +GSEY GDY T +ELI+YH P E +D++ IET+P+ +E V+
Sbjct: 120 IGPYATLLANGSEYNGDY-QGVTDEELIEYHTPLFEFYENSDVDIICIETIPSFQELKVI 178
Query: 451 AELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAK-NPAQLVAVGVNCLAPHYVE 509
L K+Y + +IS + + G +A+ ++A+ N + VAVG+NC + V+
Sbjct: 179 IGLAKKYTSKEFFISINPQTGSALSDGTSLIEVAQ-LFAEINDPRFVAVGINCTSYENVD 237
Query: 510 SLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDSVPSV-DTYVPRWLD-TGVKYVGGCCR 567
+ T D PL PN G +D +++K S V +WL VK +GGCC
Sbjct: 238 QISTYL-TDFPLFIYPNLGFVYDTTVHKFVSKVLQESTWSKSVAKWLAFPNVKAIGGCCS 296
Query: 568 TNADDMKNVNQV 579
T ++K V Q+
Sbjct: 297 TTPAEIKQVAQL 308
Score = 225 (84.3 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 56/169 (33%), Positives = 90/169 (53%)
Query: 8 QHLGLSEDQSVQLIRDAVKYVKEAIVLEEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYR 67
+++G DQ++ L A+ K A V + RD I +AGS+G Y L +GSEY
Sbjct: 82 KYIGYDMDQAIALWNSALNVAKNA-VKKSGRDDVI------IAGSIGPYATLLANGSEYN 134
Query: 68 GDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWIS 127
GDY T +ELI+YH P E +D++ IET+P+ +E V+ L K+Y + +IS
Sbjct: 135 GDY-QGVTDEELIEYHTPLFEFYENSDVDIICIETIPSFQELKVIIGLAKKYTSKEFFIS 193
Query: 128 FSCKDEKHTCHGDKFGLIARDVYAK-NPAQLVAVGVNCLAPHYVESLLT 175
+ + G +A+ ++A+ N + VAVG+NC + V+ + T
Sbjct: 194 INPQTGSALSDGTSLIEVAQ-LFAEINDPRFVAVGINCTSYENVDQIST 241
>TAIR|locus:2198075 [details] [associations]
symbol:AT1G48550 "AT1G48550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006886 "intracellular protein
transport" evidence=ISS] [GO:0007034 "vacuolar transport"
evidence=IEA] [GO:0030904 "retromer complex" evidence=IEA]
[GO:0042147 "retrograde transport, endosome to Golgi" evidence=ISS]
[GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR005377 Pfam:PF03643 EMBL:CP002684 GO:GO:0007034
GO:GO:0030904 OMA:DSVQHQG IPI:IPI00522406 RefSeq:NP_175288.1
UniGene:At.43020 ProteinModelPortal:F4HYH6 PRIDE:F4HYH6
EnsemblPlants:AT1G48550.1 GeneID:841276 KEGG:ath:AT1G48550
Uniprot:F4HYH6
Length = 327
Score = 187 (70.9 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 34/95 (35%), Positives = 61/95 (64%)
Query: 602 FRISGHLDSTECSVVRPFTGEIVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNI 661
FR++G L +T+CS+ P +GE+ +E + +PI S+++ L+RVE+ E + + IQ+
Sbjct: 185 FRVTGKL-ATQCSLQDPLSGELTVEASSVPITSIDIHLLRVESIIVGERIVTETSLIQST 243
Query: 662 QIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 696
QI +G+V + +PIY++ PRL CP++ F +
Sbjct: 244 QIADGDVCRNMTLPIYVLLPRLLMCPSVFAGPFSV 278
Score = 149 (57.5 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 196 KPIQLLSIELELAAAGKMPSGTTQIPFEAPLKAKPNRSL----FETYHGVFVNVQYNLKC 251
KPIQ++ +E+ ++GK+P GTT+IPF L+ +P + +ET+HG +N+QY L
Sbjct: 69 KPIQIVKKTIEVKSSGKIPPGTTEIPFSLNLR-EPGEGIVEKFYETFHGTNINIQYLLTA 127
Query: 252 ELKRSHFNILSKDLQKINEFILEN 275
++ R + L K L EFI+E+
Sbjct: 128 DIPRGY---LHKPLSATMEFIIES 148
Score = 46 (21.3 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 378 PAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQG 431
P I + RV G L + + L D S+ P ID H R+E++I G
Sbjct: 178 PDIKTGGFRVTGKLATQCS-LQDPLSGELTVEASSVPITSIDIHLLRVESIIVG 230
>SGD|S000006194 [details] [associations]
symbol:SAM4 "S-adenosylmethionine-homocysteine
methyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0032259 "methylation"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=IDA] [GO:0009086 "methionine biosynthetic
process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0019284 "L-methionine biosynthetic process from
S-adenosylmethionine" evidence=IDA] [GO:0050667 "homocysteine
metabolic process" evidence=IDA] InterPro:IPR003726 Pfam:PF02574
PROSITE:PS50970 SGD:S000006194 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 EMBL:BK006949 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0050667 GO:GO:0046498 eggNOG:COG2040
KO:K00547 OMA:EGYMEYL GO:GO:0019284 GeneTree:ENSGT00510000049619
HOGENOM:HOG000066018 OrthoDB:EOG4MSH79 EMBL:Z73629 PIR:S65306
RefSeq:NP_015050.1 ProteinModelPortal:Q08985 SMR:Q08985
STRING:Q08985 PaxDb:Q08985 PeptideAtlas:Q08985 EnsemblFungi:YPL273W
GeneID:855855 KEGG:sce:YPL273W CYGD:YPL273w NextBio:980460
Genevestigator:Q08985 GermOnline:YPL273W Uniprot:Q08985
Length = 325
Score = 273 (101.2 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 85/339 (25%), Positives = 162/339 (47%)
Query: 268 INEFILEN--KLYLIDGGFSSQLSKHVGEDNVTEKDNPLWCSA-FLH---------SNRQ 315
+ +F+ +N K+ ++DGG ++L E+ + NP+W + F+ +NR+
Sbjct: 6 LKQFLADNPKKVLVLDGGQGTEL-----ENRGIKVANPVWSTIPFISESFWSDESSANRK 60
Query: 316 AVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSE-DQSVQLIRDAVKYVKEAIALEE 374
V + D++ AG +I+ T TYQ S + ++ + + L+ V + + I E+
Sbjct: 61 IVKEMFNDFLNAGAEILMTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIG-ED 119
Query: 375 KRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGG-I 433
K + G +G +GA H E+ GDY + Y +P++E + +
Sbjct: 120 KY----------LIGCIGPWGA--HICREFTGDYGAEPENIDFYQYFKPQLENFNKNDKL 167
Query: 434 DLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHG---DKFGLIARDVYAK 490
DL+ ET+P E + + +I S + G ++ + +D+ K
Sbjct: 168 DLIGFETIPNIHELKAILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDK 227
Query: 491 -NPAQLVAVGVNCLAPHYVESLLTSAGRDVP---LLCCPNSGETFDPGQRIWM-NKDSVP 545
NP +G+NC++ + +L S + +P LL PNSGE +D ++IW+ N D +
Sbjct: 228 INP-NFSFLGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLN 286
Query: 546 SVDTYVPRWLDTGVKYVGGCCRTNADDMKNVNQVPVKFS 584
S DT V +++ +G + +GGCCRT+ D++ ++ K++
Sbjct: 287 SWDTVVKQYISSGARIIGGCCRTSPKDIQEISAAVKKYT 325
>SGD|S000003985 [details] [associations]
symbol:MHT1 "S-methylmethionine-homocysteine
methyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0009086 "methionine
biosynthetic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=IMP] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970 SGD:S000003985
GO:GO:0005737 GO:GO:0046872 EMBL:BK006945 GO:GO:0009086 EMBL:Z47973
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0000096
eggNOG:COG2040 OMA:ACETIPC EMBL:Z73167 EMBL:AY558194 PIR:S50958
RefSeq:NP_013038.1 ProteinModelPortal:Q12525 DIP:DIP-1934N
IntAct:Q12525 MINT:MINT-397842 STRING:Q12525 PaxDb:Q12525
EnsemblFungi:YLL062C GeneID:850664 KEGG:sce:YLL062C CYGD:YLL062c
GeneTree:ENSGT00510000049619 HOGENOM:HOG000066018 OrthoDB:EOG4MSH79
NextBio:966638 Genevestigator:Q12525 GermOnline:YLL062C
Uniprot:Q12525
Length = 324
Score = 270 (100.1 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 86/334 (25%), Positives = 164/334 (49%)
Query: 268 INEFILEN--KLYLIDGGFSSQL-SKHVGEDNVTEKDNPLWCSAFLHSN---RQAVIDTH 321
I E I+E+ K+ ++DGG ++L ++ + ++ P +F + R+ V + +
Sbjct: 6 IKELIVEHPGKVLILDGGQGTELENRGININSPVWSAAPFTSESFWEPSSQERKVVEEMY 65
Query: 322 RDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIA 381
RD++ AG +I+ T TYQA+ + +SE+ S++ + +++ + ++ R+
Sbjct: 66 RDFMIAGANILMTITYQANFQS------ISENTSIKTLAAYKRFLDKIVSFT--REFIGE 117
Query: 382 SRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYH---RPRIEALIQG-GIDLLA 437
R++ GS+G + A H EY GDY P+ IDY+ +P++E Q IDL+
Sbjct: 118 ERYL--IGSIGPWAA--HVSCEYTGDY--GPHPEN-IDYYGFFKPQLENFNQNRDIDLIG 170
Query: 438 IETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHG---DKFGLIARDVYAKNPAQ 494
ET+P E + ++ +I S D G ++ + + + K
Sbjct: 171 FETIPNFHELKAILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKN 230
Query: 495 LVAVGVNCLAPHYVESLLTSAGRDVP---LLCCPNSGETFDPGQRIWMNK-DSVPSVDTY 550
L+ +GVNC++ + +L +P LL PNSGE ++P ++ W + + +T
Sbjct: 231 LLLMGVNCVSFNQSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKLDDWETT 290
Query: 551 VPRWLDTGVKYVGGCCRTNADDMKNVNQVPVKFS 584
V +++D G + +GGCCRT+ D+ + K+S
Sbjct: 291 VKKFVDNGARIIGGCCRTSPKDIAEIASAVDKYS 324
>WB|WBGene00020491 [details] [associations]
symbol:T13G4.4 species:6239 "Caenorhabditis elegans"
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 eggNOG:COG2040
GeneTree:ENSGT00510000049619 EMBL:FO080889 RefSeq:NP_508223.2
PaxDb:Q966F6 EnsemblMetazoa:T13G4.4.1 EnsemblMetazoa:T13G4.4.2
EnsemblMetazoa:T13G4.4.3 GeneID:188484 KEGG:cel:CELE_T13G4.4
UCSC:T13G4.4 CTD:188484 WormBase:T13G4.4 InParanoid:Q966F6
OMA:TAIGGCC NextBio:938976 Uniprot:Q966F6
Length = 304
Score = 255 (94.8 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 81/302 (26%), Positives = 144/302 (47%)
Query: 279 LIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQ 338
L+DG SSQL + G D +++ P W S +++ + + + ++ ++ ++T+NTY
Sbjct: 4 LLDGSMSSQLLRF-GYDCNQQENKPHW-SFPANADMELMENVYKSFLDLEVKVITSNTYH 61
Query: 339 ASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFL 398
G + E+ + + + KY +E + S V GS+G+
Sbjct: 62 F---GSTLDKTIPENAEKRELYE--KYFEETCL--KLCHLTTGSSDVEAWGSVGTLATMY 114
Query: 399 HDGSEYRGDYID-STTPQELIDYHRPRIEALI-QGGIDLLAIETLPAQEEAMVLAELIKE 456
HD SEY G Y+D S + DY + + + I L ET+P+ +E V ++++E
Sbjct: 115 HDLSEYTGAYMDQSEAKKTAYDYFKIILTLFHNRSSIRKLIFETIPSADEGSVALDVLQE 174
Query: 457 YPGLKAWISFSCKDEKHTC--HGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTS 514
+P +A ISF+ K+ H C HG+K +A+ + K Q++ +G+NC P+ V L
Sbjct: 175 FPEFEAVISFTFKE--HGCLRHGEKITSVAQQM--KQSPQVLGIGINCTDPNNVLPALNE 230
Query: 515 AGRDV--PLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGGCCRTNADD 572
+ PN G++ + I ++ +V T V W++ GV +GGCC D
Sbjct: 231 LQPFAFSEVFVYPNKGDSKFLEEGI--DESNV-FTKTLVTSWIEKGVTAIGGCCGVTNDQ 287
Query: 573 MK 574
+K
Sbjct: 288 IK 289
Score = 173 (66.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 43/131 (32%), Positives = 70/131 (53%)
Query: 44 SRHVRVAGSLGSYGAFLHDGSEYRGDYID-STTPQELIDYHRPRIEALI-QGGIDLLAIE 101
S V GS+G+ HD SEY G Y+D S + DY + + + I L E
Sbjct: 98 SSDVEAWGSVGTLATMYHDLSEYTGAYMDQSEAKKTAYDYFKIILTLFHNRSSIRKLIFE 157
Query: 102 TLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTC--HGDKFGLIARDVYAKNPAQLVA 159
T+P+ +E V ++++E+P +A ISF+ K+ H C HG+K +A+ + K Q++
Sbjct: 158 TIPSADEGSVALDVLQEFPEFEAVISFTFKE--HGCLRHGEKITSVAQQM--KQSPQVLG 213
Query: 160 VGVNCLAPHYV 170
+G+NC P+ V
Sbjct: 214 IGINCTDPNNV 224
>ASPGD|ASPL0000037651 [details] [associations]
symbol:AN3378 species:162425 "Emericella nidulans"
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA;RCA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=IEA;RCA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970 EMBL:BN001306
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 EMBL:AACD01000055
eggNOG:COG2040 HOGENOM:HOG000265278 KO:K00547 OrthoDB:EOG42NN8C
RefSeq:XP_660982.1 ProteinModelPortal:Q5B7V2 STRING:Q5B7V2
EnsemblFungi:CADANIAT00009662 GeneID:2874359 KEGG:ani:AN3378.2
OMA:ASHTIND Uniprot:Q5B7V2
Length = 355
Score = 199 (75.1 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 61/192 (31%), Positives = 92/192 (47%)
Query: 276 KLYLIDGGFSSQLSKHVGEDNVT-EKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTT 334
K+ L+DGG + L + N+T + PLW S L S+ + HR + AG DI+ T
Sbjct: 2 KILLLDGGLGTTLESY--PFNITFTSETPLWSSHLLISSPSTLQSAHRAFYDAGADILLT 59
Query: 335 NTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRH---VRVAGSL 391
TYQ+S+EGF + D S I DA Y++ AI L P+ A + RVA SL
Sbjct: 60 ATYQSSIEGFAR-----TDAS-HTINDAGDYMRSAIPLVRGAIPSSARQRPQQCRVALSL 113
Query: 392 GSYGAFLHD-GSEYRGDYIDSTTPQELI-DYHRPRIEALIQGG-----IDLLAIETLPAQ 444
G YGA + +EY G Y ++ + +H R+ + +D +A ETL
Sbjct: 114 GPYGATMSPVAAEYTGAYPPEMDGEDALRQWHAGRLNVFVDDRESWDQVDFVAFETLIRA 173
Query: 445 EEAMVLAELIKE 456
+E + +K+
Sbjct: 174 DEVCAVRGAMKD 185
Score = 51 (23.0 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 528 GETFDPGQRIWMNKDSVPSVDTYVPRW-LDTGVK-------YVGGCCRTNADDM 573
GE +DP + W+ +++V W + G VGGCCR D+
Sbjct: 290 GEKYDPVTKTWVARETVVRCPWDESLWDVVQGQSEGDWEGIIVGGCCRAGPADI 343
>UNIPROTKB|F1N0S3 [details] [associations]
symbol:MTR "Methionine synthase" species:9913 "Bos taurus"
[GO:0008705 "methionine synthase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031419 "cobalamin
binding" evidence=IEA] [GO:0042558 "pteridine-containing compound
metabolic process" evidence=IEA] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717 GO:GO:0042558
Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705 IPI:IPI00711806
UniGene:Bt.47673 Gene3D:1.10.1240.10 Gene3D:3.10.196.10
PANTHER:PTHR21091:SF9 SUPFAM:SSF56507 SUPFAM:SSF47644
TIGRFAMs:TIGR02082 GeneTree:ENSGT00420000029824 OMA:VRKEFWG
EMBL:DAAA02061490 EMBL:DAAA02061491 EMBL:DAAA02061492
Ensembl:ENSBTAT00000016262 Uniprot:F1N0S3
Length = 1265
Score = 206 (77.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 90/339 (26%), Positives = 158/339 (46%)
Query: 261 LSKDLQKINEFILENKLYLIDGGFSSQLSKH-VGEDNVTE---KDN--PL-WCSAFLHSN 313
+ K LQ E IL+ ++ ++DGG + + +H + E++ KD+ PL + L
Sbjct: 14 MKKTLQDEIEAILQERIMVLDGGMGTMIQQHKLSEEDFRGQEFKDHARPLKGNNDILSIT 73
Query: 314 RQAVI-DTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIAL 372
+ +VI H++Y+ AG DI+ TNT+ ++ Q D ++ + + +A
Sbjct: 74 QPSVIYQIHKEYLLAGADIIETNTFSST--SIAQ-----ADYGLEHLAYRMNMCSAGVAR 126
Query: 373 EEKRDPAIASRHVR-VAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALIQ 430
+ D ++ + R VAG+LG L S R DY + T EL++ ++ + + L+
Sbjct: 127 KAAEDISLQTGIKRYVAGALGPTNKTLSVSPSVERPDYRNITF-DELVEAYKEQAKGLLD 185
Query: 431 GGIDLLAIETL--PAQEEAMVLA--ELIKE-YPGLKAWISFSCKDEK-HTCHGDKFGLIA 484
GG+D+L IET+ A +A + A +L +E Y +IS + D+ T G
Sbjct: 186 GGVDILLIETIFDTANAKAALFAVQKLFEEEYVPRPVFISGTIVDKSGRTLSGQTGEAFV 245
Query: 485 RDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWM 539
V +P + +G+NC L + + + G+ +LC PN+G TF
Sbjct: 246 ISVSHADP---LCIGLNCALGAAEMRPFIETIGKCTTAYVLCYPNAGLPNTFG------- 295
Query: 540 NKDSVPSVDT-YVPRWLDTG-VKYVGGCCRTNADDMKNV 576
+ D P V ++ + G V VGGCC T D ++ +
Sbjct: 296 DYDETPHVMAMHLKDFAVDGLVNIVGGCCGTTPDHIREI 334
>UNIPROTKB|Q4JIJ3 [details] [associations]
symbol:MTR "Methionine synthase" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008705 "methionine
synthase activity" evidence=IEA] [GO:0031419 "cobalamin binding"
evidence=IEA] [GO:0042558 "pteridine-containing compound metabolic
process" evidence=IEA] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 UniPathway:UPA00051 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
EMBL:DQ084519 IPI:IPI00711806 RefSeq:NP_001025469.1
UniGene:Bt.47673 HSSP:P13009 ProteinModelPortal:Q4JIJ3 SMR:Q4JIJ3
STRING:Q4JIJ3 PRIDE:Q4JIJ3 GeneID:280869 KEGG:bta:280869 CTD:4548
eggNOG:COG1410 HOGENOM:HOG000251409 HOVERGEN:HBG006347
InParanoid:Q4JIJ3 KO:K00548 OrthoDB:EOG41JZBC NextBio:20805009
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 Uniprot:Q4JIJ3
Length = 1265
Score = 206 (77.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 89/339 (26%), Positives = 157/339 (46%)
Query: 261 LSKDLQKINEFILENKLYLIDGGFSSQLSKH-VGEDNVTE---KDN--PLWCSAFLHSNR 314
+ K LQ E IL+ ++ ++DGG + + +H + E++ KD+ PL + + S
Sbjct: 14 MKKTLQDEIEAILQERIMVLDGGMGTMIQRHKLSEEDFRGQEFKDHARPLKGNNDILSIT 73
Query: 315 Q--AVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIAL 372
Q + H++Y+ AG DI+ TNT+ ++ Q D ++ + + +A
Sbjct: 74 QPNVIYQIHKEYLLAGADIIETNTFSST--SIAQ-----ADYGLEHLAYRMNMCSAGVAR 126
Query: 373 EEKRDPAIASRHVR-VAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALIQ 430
+ D ++ + R VAG+LG L S R DY + T EL++ ++ + + L+
Sbjct: 127 KAAEDISLQTGIKRYVAGALGPTNKTLSVSPSVERPDYRNITF-DELVEAYKEQAKGLLD 185
Query: 431 GGIDLLAIETL--PAQEEAMVLA--ELIKE-YPGLKAWISFSCKDEK-HTCHGDKFGLIA 484
GG+D+L IET+ A +A + A +L +E Y +IS + D+ T G
Sbjct: 186 GGVDILLIETIFDTANAKAALFAVQKLFEEEYVPRPVFISGTIVDKSGRTLSGQTGEAFV 245
Query: 485 RDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWM 539
V +P + +G+NC L + + + G+ +LC PN+G TF
Sbjct: 246 ISVSHADP---LCIGLNCALGAAEMRPFIETIGKCTTAYVLCYPNAGLPNTFG------- 295
Query: 540 NKDSVPSVDT-YVPRWLDTG-VKYVGGCCRTNADDMKNV 576
+ D P V ++ + G V VGGCC T D ++ +
Sbjct: 296 DYDETPHVMAMHLKDFAVDGLVNIVGGCCGTTPDHIREI 334
>SGD|S000004940 [details] [associations]
symbol:YMR321C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 SGD:S000004940 EMBL:BK006946
EMBL:Z54141 RefSeq:NP_014054.3 GeneID:855371 KEGG:sce:YMR321C
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 KO:K01689
RefSeq:NP_014056.3 GeneID:855373 KEGG:sce:YMR323W
GeneTree:ENSGT00510000049619 OrthoDB:EOG4MSH79 PIR:S69879
ProteinModelPortal:Q04898 SMR:Q04898 STRING:Q04898
EnsemblFungi:YMR321C CYGD:YMR321c NextBio:979154
Genevestigator:Q04898 GermOnline:YMR321C Uniprot:Q04898
Length = 105
Score = 171 (65.3 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 34/98 (34%), Positives = 60/98 (61%)
Query: 491 NPAQLVAVGVNCLAPHYVESLLTSAGRDVP---LLCCPNSGETFDPGQRIWM-NKDSVPS 546
NP L +G+NC++ + +L S + +P LL PNSGE +D ++IW+ N D + S
Sbjct: 9 NP-NLSFLGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNS 67
Query: 547 VDTYVPRWLDTGVKYVGGCCRTNADDMKNVNQVPVKFS 584
DT V +++ +G + +GGCCRT+ D++ ++ K++
Sbjct: 68 WDTVVKQYISSGARIIGGCCRTSPKDIQEISAAVKKYT 105
>UNIPROTKB|F1NGK3 [details] [associations]
symbol:MTR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008705 "methionine synthase
activity" evidence=IEA] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA] [GO:0042558
"pteridine-containing compound metabolic process" evidence=IEA]
[GO:0031419 "cobalamin binding" evidence=IEA] InterPro:IPR000489
InterPro:IPR003726 InterPro:IPR003759 InterPro:IPR004223
InterPro:IPR006158 InterPro:IPR011005 InterPro:IPR011822
Pfam:PF00809 Pfam:PF02310 Pfam:PF02574 Pfam:PF02607
PIRSF:PIRSF000381 PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974
PROSITE:PS51332 PROSITE:PS51337 SMART:SM01018 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
Gene3D:1.10.1240.10 PANTHER:PTHR21091:SF9 SUPFAM:SSF56507
SUPFAM:SSF47644 TIGRFAMs:TIGR02082 GeneTree:ENSGT00420000029824
EMBL:AADN02011578 EMBL:AADN02011579 EMBL:AADN02011580
EMBL:AADN02011581 EMBL:AADN02011582 EMBL:AADN02011583
EMBL:AADN02011584 EMBL:AADN02011585 IPI:IPI00576083
Ensembl:ENSGALT00000023356 ArrayExpress:F1NGK3 Uniprot:F1NGK3
Length = 988
Score = 197 (74.4 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 86/331 (25%), Positives = 153/331 (46%)
Query: 270 EFILENKLYLIDGGFSSQLSKH-VGEDNVTE---KDN--PLWCSAFLHSNRQA--VIDTH 321
E +L ++ ++DGG + + +H + E++ KD+ PL + L S Q + D H
Sbjct: 12 ESVLRERIMILDGGMGTMIQQHALSEEDFRGHEFKDHSKPLKGNNDLLSITQPDIICDIH 71
Query: 322 RDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIA 381
++Y+ AG DI+ TNT+ ++ + GL E + +L R + + ++A D A
Sbjct: 72 KEYLLAGADIIETNTFSSTRVAQADY-GL-EHLAYRLNRISAEVARKAA------DDVTA 123
Query: 382 SRHVR--VAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAI 438
++ VAGS+G L S R DY + T EL++ + + + L+ GG+D++ +
Sbjct: 124 QTGIKRYVAGSIGPTNRTLSVSPSVERPDYRNITF-DELVEAYTEQAKGLLDGGVDVMLV 182
Query: 439 ETL--PAQEEAMVLA--ELIKE-YPGLKAWISFSCKDEK-HTCHGDKFGLIARDVYAKNP 492
ET+ A +A + A +L +E Y ++S + D+ T G V P
Sbjct: 183 ETIFDTANAKAALFALHKLFEEEYAPRPIFVSGTIVDKSGRTLSGQTGEAFVISVSHSKP 242
Query: 493 AQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWMNKDSVPSV 547
+ +G+NC L + + + G+ ++C PN+G TF D P V
Sbjct: 243 ---LCIGLNCALGAVEMRPFIETIGKCTTAYVICYPNAGLPNTFG-------GYDETPEV 292
Query: 548 DT-YVPRW-LDTGVKYVGGCCRTNADDMKNV 576
++ + LD V VGGCC T ++ +
Sbjct: 293 TAKHIKNFALDGLVNIVGGCCGTTPAHIRKI 323
>UNIPROTKB|F1NLY0 [details] [associations]
symbol:MTR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008898
"homocysteine S-methyltransferase activity" evidence=IEA]
[GO:0042558 "pteridine-containing compound metabolic process"
evidence=IEA] [GO:0031419 "cobalamin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008705 "methionine
synthase activity" evidence=IEA] InterPro:IPR000489
InterPro:IPR003726 InterPro:IPR003759 InterPro:IPR004223
InterPro:IPR006158 InterPro:IPR011005 InterPro:IPR011822
Pfam:PF00809 Pfam:PF02310 Pfam:PF02574 Pfam:PF02607 Pfam:PF02965
PIRSF:PIRSF000381 PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974
PROSITE:PS51332 PROSITE:PS51337 SMART:SM01018 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082
GeneTree:ENSGT00420000029824 OMA:VRKEFWG EMBL:AADN02011578
EMBL:AADN02011579 EMBL:AADN02011580 EMBL:AADN02011581
EMBL:AADN02011582 EMBL:AADN02011583 EMBL:AADN02011584
EMBL:AADN02011585 IPI:IPI00596325 Ensembl:ENSGALT00000017613
ArrayExpress:F1NLY0 Uniprot:F1NLY0
Length = 1262
Score = 197 (74.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 86/331 (25%), Positives = 153/331 (46%)
Query: 270 EFILENKLYLIDGGFSSQLSKH-VGEDNVTE---KDN--PLWCSAFLHSNRQA--VIDTH 321
E +L ++ ++DGG + + +H + E++ KD+ PL + L S Q + D H
Sbjct: 21 ESVLRERIMILDGGMGTMIQQHALSEEDFRGHEFKDHSKPLKGNNDLLSITQPDIICDIH 80
Query: 322 RDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIA 381
++Y+ AG DI+ TNT+ ++ + GL E + +L R + + ++A D A
Sbjct: 81 KEYLLAGADIIETNTFSSTRVAQADY-GL-EHLAYRLNRISAEVARKAA------DDVTA 132
Query: 382 SRHVR--VAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAI 438
++ VAGS+G L S R DY + T EL++ + + + L+ GG+D++ +
Sbjct: 133 QTGIKRYVAGSIGPTNRTLSVSPSVERPDYRNITF-DELVEAYTEQAKGLLDGGVDVMLV 191
Query: 439 ETL--PAQEEAMVLA--ELIKE-YPGLKAWISFSCKDEK-HTCHGDKFGLIARDVYAKNP 492
ET+ A +A + A +L +E Y ++S + D+ T G V P
Sbjct: 192 ETIFDTANAKAALFALHKLFEEEYAPRPIFVSGTIVDKSGRTLSGQTGEAFVISVSHSKP 251
Query: 493 AQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWMNKDSVPSV 547
+ +G+NC L + + + G+ ++C PN+G TF D P V
Sbjct: 252 ---LCIGLNCALGAVEMRPFIETIGKCTTAYVICYPNAGLPNTFG-------GYDETPEV 301
Query: 548 DT-YVPRW-LDTGVKYVGGCCRTNADDMKNV 576
++ + LD V VGGCC T ++ +
Sbjct: 302 TAKHIKNFALDGLVNIVGGCCGTTPAHIRKI 332
>ZFIN|ZDB-GENE-031001-5 [details] [associations]
symbol:mtr "5-methyltetrahydrofolate-homocysteine
methyltransferase" species:7955 "Danio rerio" [GO:0031419
"cobalamin binding" evidence=IEA] [GO:0042558 "pteridine-containing
compound metabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0008705 "methionine synthase activity"
evidence=IEA] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] [GO:0009086 "methionine biosynthetic
process" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR000489
InterPro:IPR003726 InterPro:IPR003759 InterPro:IPR004223
InterPro:IPR006158 InterPro:IPR011005 InterPro:IPR011822
Pfam:PF00809 Pfam:PF02310 Pfam:PF02574 Pfam:PF02607 Pfam:PF02965
PIRSF:PIRSF000381 PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974
PROSITE:PS51332 PROSITE:PS51337 SMART:SM01018
ZFIN:ZDB-GENE-031001-5 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419
Gene3D:3.20.20.20 SUPFAM:SSF51717 GO:GO:0042558 Gene3D:3.40.50.280
SUPFAM:SSF52242 GO:GO:0008705 HSSP:P13009 CTD:4548 eggNOG:COG1410
HOVERGEN:HBG006347 KO:K00548 OrthoDB:EOG41JZBC Gene3D:1.10.1240.10
Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9 SUPFAM:SSF56507
SUPFAM:SSF47644 TIGRFAMs:TIGR02082 EMBL:BC045477 EMBL:AF506733
IPI:IPI00492608 RefSeq:NP_932338.1 UniGene:Dr.75737 SMR:Q8JIY6
STRING:Q8JIY6 GeneID:378847 KEGG:dre:378847 NextBio:20813844
Uniprot:Q8JIY6
Length = 1263
Score = 197 (74.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 84/326 (25%), Positives = 150/326 (46%)
Query: 272 ILENKLYLIDGGFSSQLS-KHVGEDNVTE---KDNPLWCSA---FLHSNRQAVI-DTHRD 323
+L+ ++ ++DGG + + +H+ E+ KD+P L + VI H++
Sbjct: 23 LLQQRILVLDGGMGTMIQQRHLEEEEFRGQEFKDHPKSLKGNNDILSITQPDVIYSIHKE 82
Query: 324 YVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASR 383
Y+ AG DI+ TNT+ ++ + G+ ED + +L + + + + A ++ R
Sbjct: 83 YLEAGADIIETNTFSSTSIAQADY-GM-EDLAYRLNKASAEVARRAA--DDVSAQTGCKR 138
Query: 384 HVRVAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETL- 441
V AG+LG L S R DY + T EL++ + +++ L+ GG D+L +ET+
Sbjct: 139 FV--AGALGPTNKTLSVSPSVERPDYRNITF-DELVEAYAEQVKGLLDGGADVLLVETIF 195
Query: 442 -PAQEEAMVLA--ELIKE-YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVA 497
A +A + A L +E Y IS + D+ + G V + + AQ +
Sbjct: 196 DTANAKAALFAIDRLFEESYEARPVLISGTIVDKSGRTLSGQTG--EAFVISVSHAQPLC 253
Query: 498 VGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWMNKDSVPSVDT-YV 551
+G+NC L + + + G+ ++C PN+G TF G D P V ++
Sbjct: 254 IGLNCALGASEMRPFIEAIGKSTSAFVICYPNAGLPNTFG-GY------DETPDVTAAHL 306
Query: 552 PRWLDTG-VKYVGGCCRTNADDMKNV 576
+ G V VGGCC T D ++ +
Sbjct: 307 KEFAVDGLVNIVGGCCGTTPDHIRAI 332
>RGD|621283 [details] [associations]
symbol:Mtr "5-methyltetrahydrofolate-homocysteine
methyltransferase" species:10116 "Rattus norvegicus" [GO:0005542
"folic acid binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006479 "protein methylation" evidence=IDA]
[GO:0008168 "methyltransferase activity" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008705 "methionine synthase
activity" evidence=IEA;ISO;IDA] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA] [GO:0009086 "methionine
biosynthetic process" evidence=ISO;IDA] [GO:0016597 "amino acid
binding" evidence=IDA] [GO:0031419 "cobalamin binding"
evidence=IEA;TAS] [GO:0032259 "methylation" evidence=ISO]
[GO:0042558 "pteridine-containing compound metabolic process"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEP]
[GO:0046653 "tetrahydrofolate metabolic process" evidence=IDA]
[GO:0050667 "homocysteine metabolic process" evidence=IDA]
InterPro:IPR000489 InterPro:IPR003726 InterPro:IPR003759
InterPro:IPR004223 InterPro:IPR006158 InterPro:IPR011005
InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310 Pfam:PF02574
Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381 PROSITE:PS50970
PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332 PROSITE:PS51337
SMART:SM01018 RGD:621283 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
UniPathway:UPA00051 GO:GO:0006479 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 GO:GO:0046653 GO:GO:0005542
GO:GO:0050667 Gene3D:3.20.20.20 SUPFAM:SSF51717 Gene3D:3.40.50.280
SUPFAM:SSF52242 GO:GO:0008705 HSSP:P13009 CTD:4548 eggNOG:COG1410
HOGENOM:HOG000251409 HOVERGEN:HBG006347 KO:K00548 OrthoDB:EOG41JZBC
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 EMBL:AF034214
IPI:IPI00327267 PIR:T42376 RefSeq:NP_110491.1 UniGene:Rn.205061
ProteinModelPortal:Q9Z2Q4 SMR:Q9Z2Q4 IntAct:Q9Z2Q4 STRING:Q9Z2Q4
PhosphoSite:Q9Z2Q4 PRIDE:Q9Z2Q4 GeneID:81522 KEGG:rno:81522
UCSC:RGD:621283 InParanoid:Q9Z2Q4 NextBio:615041
ArrayExpress:Q9Z2Q4 Genevestigator:Q9Z2Q4 Uniprot:Q9Z2Q4
Length = 1253
Score = 196 (74.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 93/355 (26%), Positives = 166/355 (46%)
Query: 261 LSKDLQKINEFILENKLYLIDGGFSSQLSKH-VGEDNVTE---KDN--PLWCSAFLHSNR 314
+ K LQ E IL ++ ++DGG + + ++ + E+N KD+ PL + + S
Sbjct: 1 MKKTLQDEIEAILRKRIMVLDGGMGTMIQRYKLSEENFQGQEFKDHSRPLKGNNDILSIT 60
Query: 315 Q--AVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIAL 372
Q + H++Y+ AG DI+ TNT+ ++ + GL E + ++ + + ++A
Sbjct: 61 QPDVIYQIHKEYLLAGADIIETNTFSSTSIAQADY-GL-EHLAYRMNKCSADVARKAA-- 116
Query: 373 EEKRDPAIASRHVRVAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALIQG 431
EE R V AGSLG L S R DY + T EL++ ++ + + L+ G
Sbjct: 117 EEITLQTGVKRFV--AGSLGPTNKTLSVSPSVERPDYRNITF-DELVEAYQEQAKGLLDG 173
Query: 432 GIDLLAIETL--PAQEEAMVLA--ELIKE-YPGLKA-WISFSCKDEK-HTCHGDKFGLIA 484
G+D+L IET+ A +A + A +L +E Y + +IS + D+ T G
Sbjct: 174 GVDILLIETIFDTANAKAALFALQKLFEENYASPRPIFISGTIVDKSGRTLSGQTGEAFV 233
Query: 485 RDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWM 539
V +P + +G+NC L + + + G+ +LC PN+G TF
Sbjct: 234 TSVSHSDP---LCIGLNCALGAAEMRPFIETIGKCTTAYVLCYPNAGLPNTFG------- 283
Query: 540 NKDSVPSVDT-YVPRWLDTG-VKYVGGCCRTNADDMKNVNQVP--VKFSITPESL 590
+ D P++ ++ + G V VGGCC + D ++ + + K + P+S+
Sbjct: 284 DYDETPAMMAMHLKDFAVDGLVNVVGGCCGSTPDHIREIAEAVKNCKPRVPPDSV 338
>UNIPROTKB|Q9Z2Q4 [details] [associations]
symbol:Mtr "Methionine synthase" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008898 "homocysteine S-methyltransferase activity"
evidence=IEA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 RGD:621283 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 UniPathway:UPA00051 GO:GO:0006479
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419
GO:GO:0046653 GO:GO:0005542 GO:GO:0050667 Gene3D:3.20.20.20
SUPFAM:SSF51717 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
HSSP:P13009 CTD:4548 eggNOG:COG1410 HOGENOM:HOG000251409
HOVERGEN:HBG006347 KO:K00548 OrthoDB:EOG41JZBC Gene3D:1.10.1240.10
Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9 SUPFAM:SSF56507
SUPFAM:SSF47644 TIGRFAMs:TIGR02082 EMBL:AF034214 IPI:IPI00327267
PIR:T42376 RefSeq:NP_110491.1 UniGene:Rn.205061
ProteinModelPortal:Q9Z2Q4 SMR:Q9Z2Q4 IntAct:Q9Z2Q4 STRING:Q9Z2Q4
PhosphoSite:Q9Z2Q4 PRIDE:Q9Z2Q4 GeneID:81522 KEGG:rno:81522
UCSC:RGD:621283 InParanoid:Q9Z2Q4 NextBio:615041
ArrayExpress:Q9Z2Q4 Genevestigator:Q9Z2Q4 Uniprot:Q9Z2Q4
Length = 1253
Score = 196 (74.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 93/355 (26%), Positives = 166/355 (46%)
Query: 261 LSKDLQKINEFILENKLYLIDGGFSSQLSKH-VGEDNVTE---KDN--PLWCSAFLHSNR 314
+ K LQ E IL ++ ++DGG + + ++ + E+N KD+ PL + + S
Sbjct: 1 MKKTLQDEIEAILRKRIMVLDGGMGTMIQRYKLSEENFQGQEFKDHSRPLKGNNDILSIT 60
Query: 315 Q--AVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIAL 372
Q + H++Y+ AG DI+ TNT+ ++ + GL E + ++ + + ++A
Sbjct: 61 QPDVIYQIHKEYLLAGADIIETNTFSSTSIAQADY-GL-EHLAYRMNKCSADVARKAA-- 116
Query: 373 EEKRDPAIASRHVRVAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALIQG 431
EE R V AGSLG L S R DY + T EL++ ++ + + L+ G
Sbjct: 117 EEITLQTGVKRFV--AGSLGPTNKTLSVSPSVERPDYRNITF-DELVEAYQEQAKGLLDG 173
Query: 432 GIDLLAIETL--PAQEEAMVLA--ELIKE-YPGLKA-WISFSCKDEK-HTCHGDKFGLIA 484
G+D+L IET+ A +A + A +L +E Y + +IS + D+ T G
Sbjct: 174 GVDILLIETIFDTANAKAALFALQKLFEENYASPRPIFISGTIVDKSGRTLSGQTGEAFV 233
Query: 485 RDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWM 539
V +P + +G+NC L + + + G+ +LC PN+G TF
Sbjct: 234 TSVSHSDP---LCIGLNCALGAAEMRPFIETIGKCTTAYVLCYPNAGLPNTFG------- 283
Query: 540 NKDSVPSVDT-YVPRWLDTG-VKYVGGCCRTNADDMKNVNQVP--VKFSITPESL 590
+ D P++ ++ + G V VGGCC + D ++ + + K + P+S+
Sbjct: 284 DYDETPAMMAMHLKDFAVDGLVNVVGGCCGSTPDHIREIAEAVKNCKPRVPPDSV 338
>UNIPROTKB|F1RHM1 [details] [associations]
symbol:MTR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008705 "methionine synthase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031419 "cobalamin
binding" evidence=IEA] [GO:0042558 "pteridine-containing compound
metabolic process" evidence=IEA] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717 GO:GO:0042558
Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082
GeneTree:ENSGT00420000029824 OMA:VRKEFWG EMBL:CU467009
EMBL:CU468604 Ensembl:ENSSSCT00000011105 Uniprot:F1RHM1
Length = 1264
Score = 196 (74.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 101/409 (24%), Positives = 184/409 (44%)
Query: 261 LSKDLQKINEFILENKLYLIDGGFSSQLSKH-VGEDNVTEKD-----NPLWCSAFLHSNR 314
+ K LQ E IL+ ++ ++DGG + + +H + ED+ ++ PL + + S
Sbjct: 14 MKKTLQDDIEAILQERIMVLDGGMGTMIQRHKLSEDDFRGQEFQDHARPLKGNNDILSIT 73
Query: 315 QA--VIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIAL 372
Q + H+DY+ AG DI+ TNT+ ++ + GL E + ++ + + ++A A
Sbjct: 74 QPDIIYQIHKDYLLAGADIIETNTFSSTNIAQADY-GL-EHLAYRMNKCSAGVARKA-AE 130
Query: 373 EEKRDPAIASRHVRVAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALIQG 431
E I R V AG+LG L S + DY + T EL++ ++ + + L+ G
Sbjct: 131 EISLQTGI-KRFV--AGALGPTNKTLSVSPSVEKPDYRNITF-DELVEAYKEQAKGLLDG 186
Query: 432 GIDLLAIETL--PAQEEAMVLA--ELIKE-YPGLKAWISFSCKDEK-HTCHGDKFGLIAR 485
G+D+L IET+ A +A + A +L +E Y +IS + D+ T G
Sbjct: 187 GVDILLIETIFDTANAKAALFAVQKLFEEEYAPQPIFISGTIVDKSGRTLSGQTGEAFVI 246
Query: 486 DVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWMN 540
V +P + +G+NC L + + + G+ +LC PN+G TF +
Sbjct: 247 SVSHADP---LCIGLNCALGAAEMRPFIETIGKCTTAYVLCYPNAGLPNTFG-------D 296
Query: 541 KDSVPSVDT-YVPRWLDTG-VKYVGGCCRTNADDMKNVNQVPVKFS--ITPESLTNARDK 596
D P + ++ + G V VGGCC T ++ + + + + P ++
Sbjct: 297 YDETPHMMAMHLKDFATDGLVNIVGGCCGTTPAHIREIAEAVKNYKPRVPPATVFEGHML 356
Query: 597 FN-IPRFRISGHLD---STECSVV--RPFTGEIVIEQTELPIKSVELQL 639
+ I FRI + + C+V R F I+ + E + ++Q+
Sbjct: 357 LSGISPFRIGPYTNFNIGERCNVAGSRKFAKLIMEGKYEEALSVAKMQV 405
>POMBASE|SPAC57A7.07c [details] [associations]
symbol:SPAC57A7.07c "homocysteine methyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000096
"sulfur amino acid metabolic process" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006534 "cysteine metabolic process" evidence=NAS] [GO:0008898
"homocysteine S-methyltransferase activity" evidence=ISO]
InterPro:IPR003726 Pfam:PF02574 PROSITE:PS50970
PomBase:SPAC57A7.07c GO:GO:0005634 GO:GO:0005737 EMBL:CU329670
GO:GO:0006534 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
eggNOG:COG2040 PIR:T38947 RefSeq:NP_593374.1
ProteinModelPortal:P87138 EnsemblFungi:SPAC57A7.07c.1
GeneID:2542156 KEGG:spo:SPAC57A7.07c OMA:IREESIP OrthoDB:EOG42NN8C
NextBio:20803228 Uniprot:P87138
Length = 308
Score = 183 (69.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 80/301 (26%), Positives = 134/301 (44%)
Query: 277 LYLIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNT 336
+ ++DGG ++ L K ++++E + LW S L + V+ H ++++ CDI++T T
Sbjct: 1 MLMLDGGSTAILPKL--PESISE--SRLWTSEALVRYPEIVVKHHEEFLKV-CDIISTFT 55
Query: 337 YQASVEGFVQHL-GLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYG 395
YQ + + + G+ Q Y +E + L K +A LGS+
Sbjct: 56 YQLDASIYDEKVEGVPLKQVYANSIGLPVYAREHLGLPNKY----------IALCLGSHA 105
Query: 396 AFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGG------IDLLAIETLPAQEEAMV 449
A + EY+ Y T + L ++H+ RIEA+ ID +A E+LP EA V
Sbjct: 106 ATIPGCMEYKMIYDKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFESLPHVTEAEV 165
Query: 450 LAELIKEYPGL--KAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHY 507
+ +LI++ G + WI+ +C E+ T ++ I + + N + +GVNC H
Sbjct: 166 VCQLIQDMKGWSKRCWITCTCP-ERSTI--ERVSSIISKILSINHDSIWGIGVNCF--HL 220
Query: 508 VESLLTSAGRDVPLLCCPNSGETFDP-GQRIWMNKDSV--P-SVDTYVP---RWLDTGVK 560
SLL + + L N P G+ ++ N D P S D P W K
Sbjct: 221 --SLLEPIAKMLSSLLPSNITAILYPDGRGLYQNPDGTFSPGSTDHPAPSPEEWSTITAK 278
Query: 561 Y 561
Y
Sbjct: 279 Y 279
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 61/221 (27%), Positives = 97/221 (43%)
Query: 49 VAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGG------IDLLAIET 102
+A LGS+ A + EY+ Y T + L ++H+ RIEA+ ID +A E+
Sbjct: 97 IALCLGSHAATIPGCMEYKMIYDKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFES 156
Query: 103 LPAQEEAMVLAELIKEYPGL--KAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAV 160
LP EA V+ +LI++ G + WI+ +C E+ T ++ I + + N + +
Sbjct: 157 LPHVTEAEVVCQLIQDMKGWSKRCWITCTCP-ERSTI--ERVSSIISKILSINHDSIWGI 213
Query: 161 GVNCLAPHYVESLLTSAEVEGQSLELPVNNTLISRKPIQLLSIELELAAAGKMPSGTTQI 220
GVNC H SLL SL LP N T I + L + G G+T
Sbjct: 214 GVNCF--HL--SLLEPIAKMLSSL-LPSNITAILYPDGRGLYQNPD----GTFSPGSTDH 264
Query: 221 PFEAPLKAKPNRSLFETYHGVFVNVQYNLKCELKRSHFNIL 261
P +P + + + H N+ CE +H ++L
Sbjct: 265 PAPSPEEWSTITAKYSNLHNG--NLILGGCCETNYNHLSLL 303
>MGI|MGI:894292 [details] [associations]
symbol:Mtr "5-methyltetrahydrofolate-homocysteine
methyltransferase" species:10090 "Mus musculus" [GO:0005542 "folic
acid binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006479
"protein methylation" evidence=ISO] [GO:0008168 "methyltransferase
activity" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0008705 "methionine synthase activity"
evidence=ISO;IMP] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] [GO:0009086 "methionine biosynthetic
process" evidence=ISO;IMP] [GO:0016597 "amino acid binding"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0031419 "cobalamin binding" evidence=IEA] [GO:0032259
"methylation" evidence=IMP] [GO:0042558 "pteridine-containing
compound metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0046653 "tetrahydrofolate
metabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050667 "homocysteine metabolic process"
evidence=ISO] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 MGI:MGI:894292 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 UniPathway:UPA00051 GO:GO:0006479
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419
GO:GO:0046653 GO:GO:0005542 GO:GO:0050667 Gene3D:3.20.20.20
SUPFAM:SSF51717 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
CTD:4548 eggNOG:COG1410 HOGENOM:HOG000251409 HOVERGEN:HBG006347
KO:K00548 OrthoDB:EOG41JZBC Gene3D:1.10.1240.10 Gene3D:3.10.196.10
PANTHER:PTHR21091:SF9 SUPFAM:SSF56507 SUPFAM:SSF47644
TIGRFAMs:TIGR02082 GeneTree:ENSGT00420000029824 EMBL:BC145683
EMBL:BC145685 EMBL:AK142258 IPI:IPI00755605 RefSeq:NP_001074597.1
UniGene:Mm.40335 ProteinModelPortal:A6H5Y3 SMR:A6H5Y3 STRING:A6H5Y3
PhosphoSite:A6H5Y3 PaxDb:A6H5Y3 PRIDE:A6H5Y3
Ensembl:ENSMUST00000099856 GeneID:238505 KEGG:mmu:238505
UCSC:uc007plh.1 InParanoid:A6H5Y3 OMA:RNQPVEK ChEMBL:CHEMBL3188
NextBio:383806 Bgee:A6H5Y3 Genevestigator:A6H5Y3 Uniprot:A6H5Y3
Length = 1253
Score = 194 (73.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 92/345 (26%), Positives = 160/345 (46%)
Query: 261 LSKDLQKINEFILENKLYLIDGGFSSQLSKH-VGEDNVTE---KDN--PLWCSAFLHSNR 314
+ K LQ E IL ++ ++DGG + + ++ + E++ KD+ PL + + S
Sbjct: 1 MKKTLQDEIEAILRKRIMVLDGGMGTMIQRYKLSEEHFQGQEFKDHSRPLKGNNDILSIT 60
Query: 315 QA--VIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIAL 372
Q + H++Y+ AG DI+ TNT+ ++ + GL E + ++ + + ++A
Sbjct: 61 QPDIIYQIHKEYLLAGADIIETNTFSSTSIAQADY-GL-EHLAYRMNKCSADVARKAA-- 116
Query: 373 EEKRDPAIASRHVRVAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALIQG 431
EE R V AG+LG L S R DY + T EL+D ++ + + L+ G
Sbjct: 117 EEITLQTGVKRFV--AGALGPTNKTLSVSPSVERPDYRNITF-DELVDAYQEQAKGLLDG 173
Query: 432 GIDLLAIETL--PAQEEAMVLA--ELIKE-Y-PGLKAWISFSCKDEK-HTCHGDKFGLIA 484
+D+L IET+ A +A + A L +E Y P +IS + D+ T G
Sbjct: 174 RVDILLIETIFDTANAKAALFAIQNLFEENYAPPRPIFISGTIVDKSGRTLSGQTGEAFV 233
Query: 485 RDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWM 539
V +P + +G+NC L + + + G+ +LC PN+G TF
Sbjct: 234 TSVSHSDP---LCIGLNCSLGAAEMRPFIETIGKCTTAYVLCYPNAGLPNTFG------- 283
Query: 540 NKDSVPS-VDTYVPRWLDTG-VKYVGGCCRTNADDMKNVNQVPVK 582
+ D PS + T++ + G V VGGCC + D ++ + + K
Sbjct: 284 DYDETPSTMATHLKDFAVDGLVNIVGGCCGSTPDHIREIAEAVKK 328
>UNIPROTKB|E2R716 [details] [associations]
symbol:MTR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008705 "methionine synthase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031419
"cobalamin binding" evidence=IEA] [GO:0042558 "pteridine-containing
compound metabolic process" evidence=IEA] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282
GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717 GO:GO:0042558
Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082
GeneTree:ENSGT00420000029824 OMA:VRKEFWG EMBL:AAEX03002674
EMBL:AAEX03002673 Ensembl:ENSCAFT00000016858 Uniprot:E2R716
Length = 1268
Score = 190 (71.9 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 85/338 (25%), Positives = 152/338 (44%)
Query: 261 LSKDLQKINEFILENKLYLIDGGFSSQLSKH-VGEDNVTEKDNPLWCSAFLHSNR----- 314
+ K LQ E IL ++ ++DGG + + +H + E++ + + +N
Sbjct: 14 VKKSLQDEIEAILRERIMVLDGGMGTMIQRHKLSEEDFRGHEFQDHARSLKGNNDILSIT 73
Query: 315 --QAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIAL 372
+ H+DY+ AG DI+ TNT+ ++ + GL E + Q+ + + ++A
Sbjct: 74 QPNVIYQIHKDYLLAGADIIETNTFSSTNVAQADY-GL-EHLAYQMNKCSAGVARKAA-- 129
Query: 373 EEKRDPAIASRHVRVAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALIQG 431
EE R V AG+LG L S + DY + T EL++ ++ + + L+ G
Sbjct: 130 EEVSFQTGIKRFV--AGALGPTNKTLSVSPSVEKPDYRNITF-DELVEAYKEQAKGLLDG 186
Query: 432 GIDLLAIETL--PAQEEAMVLA-ELI--KEYPGLKAWISFSCKDEK-HTCHGDKFGLIAR 485
G+D+L IET+ A +A + A + + +EY +IS + D+ T G
Sbjct: 187 GVDILLIETIFDTANAKAALFALQTLFEEEYSPRPIFISGTIIDKSGRTLSGQTGEAFVI 246
Query: 486 DVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWMN 540
V +P + +G+NC L + + + G+ +LC PN+G TF +
Sbjct: 247 SVSHASP---LCIGLNCALGAAEMRPFIETIGKCTTAYVLCYPNAGLPNTFG-------D 296
Query: 541 KDSVPSVDTYVPR--WLDTGVKYVGGCCRTNADDMKNV 576
D P + + +D V VGGCC T+ D ++ +
Sbjct: 297 YDETPQMMAMQLKDFAMDGLVNIVGGCCGTSPDHIREI 334
>DICTYBASE|DDB_G0284699 [details] [associations]
symbol:mtr "cobalamin-dependent methionine synthase"
species:44689 "Dictyostelium discoideum" [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0042558 "pteridine-containing compound metabolic
process" evidence=IEA] [GO:0031419 "cobalamin binding"
evidence=IEA] [GO:0009086 "methionine biosynthetic process"
evidence=IEA;ISS] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] [GO:0008705 "methionine synthase activity"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0032259 "methylation"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] InterPro:IPR000489 InterPro:IPR003726
InterPro:IPR003759 InterPro:IPR004223 InterPro:IPR006158
InterPro:IPR011005 InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310
Pfam:PF02574 Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381
PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332
PROSITE:PS51337 SMART:SM01018 dictyBase:DDB_G0284699
GenomeReviews:CM000153_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
UniPathway:UPA00051 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 EMBL:AAFI02000070 Gene3D:3.20.20.20
SUPFAM:SSF51717 GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242
GO:GO:0008705 HSSP:P13009 eggNOG:COG1410 KO:K00548
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 OMA:VRKEFWG
RefSeq:XP_638483.1 ProteinModelPortal:Q54P92 SMR:Q54P92
STRING:Q54P92 PRIDE:Q54P92 EnsemblProtists:DDB0230138
GeneID:8624734 KEGG:ddi:DDB_G0284699 ProtClustDB:CLSZ2430243
Uniprot:Q54P92
Length = 1260
Score = 181 (68.8 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 83/325 (25%), Positives = 140/325 (43%)
Query: 272 ILENKLYLIDGGFSSQLSKHVGEDNVTE----KDNP--LWCSAFLHSNRQAVI--DTHRD 323
IL ++ ++DG +++ K +DN KD P L + L S Q I + H
Sbjct: 19 ILSERIMVLDGAMGTEIQKFKLKDNDYRGEEFKDFPHELGGNNDLLSLTQPHIIREIHCK 78
Query: 324 YVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIR-DAVKYVKEAIALEEKRDPAIAS 382
Y+ AG D + TNT+ ++ F Q + V+ I ++ + K A K+DP S
Sbjct: 79 YLEAGADFIETNTFNGNI--FSQ-ADYKMEHLVKRINIESARLAKSACEEYTKKDP---S 132
Query: 383 RHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIET-- 440
R V G++G + EL+ + ++EAL++GGID++ +ET
Sbjct: 133 RPRFVCGAVGPTNKTASISPSVERPEARNVLFDELVSGYLEQVEALVEGGIDVILVETVF 192
Query: 441 --LPAQEEAMVLAELIKEY-PGLKAWISFSCKDEK-HTCHGDKFGLIARDVYAKNPAQLV 496
L + + E K Y P L ++S + D+ T G V + N L+
Sbjct: 193 DSLNCKAALFAIEEFFKTYSPRLPVFVSGTIVDKSGRTLSGQTGEAFYTSVASAN---LM 249
Query: 497 AVGVNC-LAPHYVESLLTSAGR--DVPLLCCPNSG--ETFDPGQRIWMNKDSVPSVDT-Y 550
G+NC L + L + + + + C PN+G TF G D P +
Sbjct: 250 VFGLNCALGAQEMRPFLQNISKCSECYVSCYPNAGLPNTFG-GY------DETPEMMAEQ 302
Query: 551 VPRWLDTGV-KYVGGCCRTNADDMK 574
+ + ++G+ VGGCC T+ D ++
Sbjct: 303 IKEFAESGLLNIVGGCCGTSPDHIR 327
>UNIPROTKB|B7ZLW7 [details] [associations]
symbol:MTR "Methionine synthase" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008705
"methionine synthase activity" evidence=IEA] [GO:0008898
"homocysteine S-methyltransferase activity" evidence=IEA]
[GO:0042558 "pteridine-containing compound metabolic process"
evidence=IEA] [GO:0031419 "cobalamin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000489
InterPro:IPR003726 InterPro:IPR003759 InterPro:IPR004223
InterPro:IPR006158 InterPro:IPR011005 InterPro:IPR011822
Pfam:PF00809 Pfam:PF02310 Pfam:PF02574 Pfam:PF02965
PIRSF:PIRSF000381 PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974
PROSITE:PS51332 PROSITE:PS51337 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 EMBL:AL359185 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
HOVERGEN:HBG006347 Gene3D:1.10.1240.10 Gene3D:3.10.196.10
PANTHER:PTHR21091:SF9 SUPFAM:SSF56507 TIGRFAMs:TIGR02082
EMBL:AL359259 UniGene:Hs.498187 HGNC:HGNC:7468 ChiTaRS:MTR
EMBL:BC144095 IPI:IPI01013609 SMR:B7ZLW7 STRING:B7ZLW7
Ensembl:ENST00000535889 UCSC:uc010pxx.2 Uniprot:B7ZLW7
Length = 1214
Score = 178 (67.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 85/339 (25%), Positives = 158/339 (46%)
Query: 261 LSKDLQ-KINEFILENKLYLIDGGFSSQLSKH-VGEDNVTE---KDN--PLWCSAFLHSN 313
L K L+ +IN IL+ ++ ++DGG + + + + E++ KD+ PL + + S
Sbjct: 14 LKKTLRDEINA-ILQKRIMVLDGGMGTMIQREKLNEEHFRGQEFKDHARPLKGNNDILSI 72
Query: 314 RQ--AVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIA 371
Q + H++Y+ AG DI+ TNT+ ++ Q D ++ + + +A
Sbjct: 73 TQPDVIYQIHKEYLLAGADIIETNTFSST--SIAQ-----ADYGLEHLAYRMNMCSAGVA 125
Query: 372 LEEKRDPAIASRHVR-VAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALI 429
+ + + + R VAG+LG L S R DY + T EL++ ++ + + L+
Sbjct: 126 RKAAEEVTLQTGIKRFVAGALGPTNKTLSVSPSVERPDYRNITF-DELVEAYQEQAKGLL 184
Query: 430 QGGIDLLAIETL--PAQEEAMVLA--ELIKE-YPGLKAWISFSCKDEKHTCHGDKFGLIA 484
GG+D+L IET+ A +A + A L +E Y +IS + D+ + G
Sbjct: 185 DGGVDILLIETIFDTANAKAALFALQNLFEEKYAPRPIFISGTIVDKSGRTLSGQTG--E 242
Query: 485 RDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWM 539
V + + + + +G+NC L + + G+ +LC PN+G TF
Sbjct: 243 GFVISVSHGEPLCIGLNCALGAAEMRPFIEIIGKCTTAYVLCYPNAGLPNTFG------- 295
Query: 540 NKDSVPSVDT-YVPRW-LDTGVKYVGGCCRTNADDMKNV 576
+ D PS+ ++ + +D V VGGCC + D ++ +
Sbjct: 296 DYDETPSMMAKHLKDFAMDGLVNIVGGCCGSTPDHIREI 334
>UNIPROTKB|Q99707 [details] [associations]
symbol:MTR "Methionine synthase" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008898
"homocysteine S-methyltransferase activity" evidence=IEA]
[GO:0042558 "pteridine-containing compound metabolic process"
evidence=IEA] [GO:0031419 "cobalamin binding" evidence=IEA]
[GO:0008705 "methionine synthase activity" evidence=IEA]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0000096
"sulfur amino acid metabolic process" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006805 "xenobiotic metabolic process"
evidence=TAS] [GO:0032259 "methylation" evidence=TAS] [GO:0034641
"cellular nitrogen compound metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_111217
InterPro:IPR000489 InterPro:IPR003726 InterPro:IPR003759
InterPro:IPR004223 InterPro:IPR006158 InterPro:IPR011005
InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310 Pfam:PF02574
Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381 PROSITE:PS50970
PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332 PROSITE:PS51337
SMART:SM01018 GO:GO:0005829 GO:GO:0007399 GO:GO:0034641
GO:GO:0046872 GO:GO:0008270 EMBL:CH471098 GO:GO:0006805
EMBL:AL359185 UniPathway:UPA00051 DrugBank:DB00116 GO:GO:0032259
DrugBank:DB00200 DrugBank:DB00134 GO:GO:0006479 GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0000096 GO:GO:0031419
MIM:601634 Orphanet:3388 GO:GO:0046653 GO:GO:0005542 GO:GO:0050667
Gene3D:3.20.20.20 SUPFAM:SSF51717 Gene3D:3.40.50.280
SUPFAM:SSF52242 GO:GO:0008705 CTD:4548 eggNOG:COG1410
HOGENOM:HOG000251409 HOVERGEN:HBG006347 KO:K00548 OrthoDB:EOG41JZBC
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 OMA:VRKEFWG
EMBL:U71285 EMBL:U75743 EMBL:U73338 EMBL:AL359259 EMBL:BC130616
EMBL:BC136440 IPI:IPI00743284 RefSeq:NP_000245.2 UniGene:Hs.498187
PDB:2O2K PDBsum:2O2K ProteinModelPortal:Q99707 SMR:Q99707
IntAct:Q99707 STRING:Q99707 PhosphoSite:Q99707 DMDM:2842762
PaxDb:Q99707 PRIDE:Q99707 Ensembl:ENST00000366577 GeneID:4548
KEGG:hsa:4548 UCSC:uc001hyi.4 GeneCards:GC01P236958 HGNC:HGNC:7468
HPA:HPA044474 MIM:156570 MIM:250940 MIM:603174 neXtProt:NX_Q99707
Orphanet:2170 PharmGKB:PA31272 InParanoid:Q99707 PhylomeDB:Q99707
ChiTaRS:MTR EvolutionaryTrace:Q99707 GenomeRNAi:4548 NextBio:17533
ArrayExpress:Q99707 Bgee:Q99707 CleanEx:HS_MTR
Genevestigator:Q99707 GermOnline:ENSG00000116984 Uniprot:Q99707
Length = 1265
Score = 178 (67.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 85/339 (25%), Positives = 158/339 (46%)
Query: 261 LSKDLQ-KINEFILENKLYLIDGGFSSQLSKH-VGEDNVTE---KDN--PLWCSAFLHSN 313
L K L+ +IN IL+ ++ ++DGG + + + + E++ KD+ PL + + S
Sbjct: 14 LKKTLRDEINA-ILQKRIMVLDGGMGTMIQREKLNEEHFRGQEFKDHARPLKGNNDILSI 72
Query: 314 RQ--AVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIA 371
Q + H++Y+ AG DI+ TNT+ ++ Q D ++ + + +A
Sbjct: 73 TQPDVIYQIHKEYLLAGADIIETNTFSST--SIAQ-----ADYGLEHLAYRMNMCSAGVA 125
Query: 372 LEEKRDPAIASRHVR-VAGSLGSYGAFLH-DGSEYRGDYIDSTTPQELIDYHRPRIEALI 429
+ + + + R VAG+LG L S R DY + T EL++ ++ + + L+
Sbjct: 126 RKAAEEVTLQTGIKRFVAGALGPTNKTLSVSPSVERPDYRNITF-DELVEAYQEQAKGLL 184
Query: 430 QGGIDLLAIETL--PAQEEAMVLA--ELIKE-YPGLKAWISFSCKDEKHTCHGDKFGLIA 484
GG+D+L IET+ A +A + A L +E Y +IS + D+ + G
Sbjct: 185 DGGVDILLIETIFDTANAKAALFALQNLFEEKYAPRPIFISGTIVDKSGRTLSGQTG--E 242
Query: 485 RDVYAKNPAQLVAVGVNC-LAPHYVESLLTSAGRDVP--LLCCPNSG--ETFDPGQRIWM 539
V + + + + +G+NC L + + G+ +LC PN+G TF
Sbjct: 243 GFVISVSHGEPLCIGLNCALGAAEMRPFIEIIGKCTTAYVLCYPNAGLPNTFG------- 295
Query: 540 NKDSVPSVDT-YVPRW-LDTGVKYVGGCCRTNADDMKNV 576
+ D PS+ ++ + +D V VGGCC + D ++ +
Sbjct: 296 DYDETPSMMAKHLKDFAMDGLVNIVGGCCGSTPDHIREI 334
>TIGR_CMR|CPS_1101 [details] [associations]
symbol:CPS_1101 "5-methyltetrahydrofolate--homocysteine
S-methyltransferase" species:167879 "Colwellia psychrerythraea 34H"
[GO:0008705 "methionine synthase activity" evidence=ISS]
[GO:0009086 "methionine biosynthetic process" evidence=ISS]
InterPro:IPR000489 InterPro:IPR003726 InterPro:IPR003759
InterPro:IPR004223 InterPro:IPR006158 InterPro:IPR011005
InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310 Pfam:PF02574
Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381 PROSITE:PS50970
PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332 PROSITE:PS51337
SMART:SM01018 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20
SUPFAM:SSF51717 GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242
GO:GO:0008705 eggNOG:COG1410 HOGENOM:HOG000251409 KO:K00548
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 OMA:VRKEFWG
ProtClustDB:PRK09490 RefSeq:YP_267845.1 ProteinModelPortal:Q487C0
SMR:Q487C0 STRING:Q487C0 GeneID:3522779 KEGG:cps:CPS_1101
PATRIC:21465469 BioCyc:CPSY167879:GI48-1183-MONOMER Uniprot:Q487C0
Length = 1230
Score = 173 (66.0 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 70/266 (26%), Positives = 115/266 (43%)
Query: 321 HRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAI 380
H +Y+ AG DI+ TNT+ A+ + ++ S ++ R A + +EA K++P
Sbjct: 70 HLEYLEAGADILETNTFNATTIAMADYD--MQEYSAEINRVAAQIAREAADEYTKKNP-- 125
Query: 381 ASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIET 440
R VAG LG + + T EL D + ALI+GG D++ IET
Sbjct: 126 -DRPRFVAGVLGPTNRTCSISPDVNDPAYRNVTFDELKDAYIESTLALIEGGSDIILIET 184
Query: 441 L--PAQEEAMVLA-ELIKEYPG--LKAWISFSCKDEK-HTCHGDKFGLIARDVYAKNPAQ 494
+ +A V A E + + G L IS + D T G + P
Sbjct: 185 IFDTLNAKAAVFAVETVFDQLGERLPVMISGTITDASGRTLSGQTTEAFYNSLRHAKP-- 242
Query: 495 LVAVGVNC-LAPHYVESLLTSAGR--DVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYV 551
V+ G+NC L P + + R D + PN+G G+ + +V ++T+V
Sbjct: 243 -VSFGLNCALGPVELRQYVAELSRICDTAVSAHPNAGLPNAFGEYDF----TVEDMNTHV 297
Query: 552 PRWLDTG-VKYVGGCCRTNADDMKNV 576
W +G + +GGCC T + ++ +
Sbjct: 298 EEWASSGFLNIIGGCCGTTPEHIRGM 323
>UNIPROTKB|Q81LY0 [details] [associations]
symbol:BAS4157 "Methylenetetrahydrofolate reductase"
species:1392 "Bacillus anthracis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003171 InterPro:IPR003726 Pfam:PF02219 Pfam:PF02574
PROSITE:PS50970 GO:GO:0006555 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 HSSP:Q93088 GO:GO:0004489 KO:K00548
HOGENOM:HOG000028409 OMA:QSHLMGL ProtClustDB:PRK08645
RefSeq:NP_846704.1 RefSeq:YP_021122.1 RefSeq:YP_030406.1
ProteinModelPortal:Q81LY0 IntAct:Q81LY0 DNASU:1087947
EnsemblBacteria:EBBACT00000009222 EnsemblBacteria:EBBACT00000016813
EnsemblBacteria:EBBACT00000022560 GeneID:1087947 GeneID:2819794
GeneID:2851209 KEGG:ban:BA_4479 KEGG:bar:GBAA_4479 KEGG:bat:BAS4157
BioCyc:BANT260799:GJAJ-4213-MONOMER
BioCyc:BANT261594:GJ7F-4355-MONOMER Uniprot:Q81LY0
Length = 610
Score = 115 (45.5 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 44/203 (21%), Positives = 94/203 (46%)
Query: 391 LGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVL 450
LG+ G H G+ +TT E + AL++ +D L +ET + E +
Sbjct: 100 LGTIGGMKHIGAV-------TTTDMEREFMLLEQASALLEEQVDGLLLETFYDEFELLHA 152
Query: 451 AELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDV--YAKNPAQLVAVGVNC-LAP-H 506
+++++ + + + T +G+ I + + Y N VG+NC L P H
Sbjct: 153 VQVLRKETNIPIVAQLALHEAGTTQNGNDVNEILKQLLDYGAN-----VVGLNCQLGPLH 207
Query: 507 YVESL-LTSAGRDVPLLCCPNSG-ETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGG 564
E+ + S ++ L PN+G + G+ ++ + S + P++++ G++ +GG
Sbjct: 208 MTEAFKMISIPKNGYLSAYPNAGLPNYVEGRYVY--EGSPAYFEAMTPKFIEQGIRLLGG 265
Query: 565 CCRTNADDMKNVNQVPVKFSITP 587
CC T + ++++ + + ++TP
Sbjct: 266 CCGTTPEHIESMKRATL--NVTP 286
Score = 101 (40.6 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 312 SNRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAI 370
S+ +I H+ YV AG D++ TNTY A+ E ++ GL E+Q ++ R AVK K ++
Sbjct: 37 SDPDLIISIHKQYVAAGADVIQTNTYGAN-EAKLRMYGL-ENQVTEINRAAVKLAKASV 93
>TIGR_CMR|BA_4479 [details] [associations]
symbol:BA_4479 "homocysteine S-methyltransferase domain
protein/methylenetetrahydrofolate reductase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003171 InterPro:IPR003726 Pfam:PF02219
Pfam:PF02574 PROSITE:PS50970 GO:GO:0006555 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 HSSP:Q93088 GO:GO:0004489
KO:K00548 HOGENOM:HOG000028409 OMA:QSHLMGL ProtClustDB:PRK08645
RefSeq:NP_846704.1 RefSeq:YP_021122.1 RefSeq:YP_030406.1
ProteinModelPortal:Q81LY0 IntAct:Q81LY0 DNASU:1087947
EnsemblBacteria:EBBACT00000009222 EnsemblBacteria:EBBACT00000016813
EnsemblBacteria:EBBACT00000022560 GeneID:1087947 GeneID:2819794
GeneID:2851209 KEGG:ban:BA_4479 KEGG:bar:GBAA_4479 KEGG:bat:BAS4157
BioCyc:BANT260799:GJAJ-4213-MONOMER
BioCyc:BANT261594:GJ7F-4355-MONOMER Uniprot:Q81LY0
Length = 610
Score = 115 (45.5 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 44/203 (21%), Positives = 94/203 (46%)
Query: 391 LGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVL 450
LG+ G H G+ +TT E + AL++ +D L +ET + E +
Sbjct: 100 LGTIGGMKHIGAV-------TTTDMEREFMLLEQASALLEEQVDGLLLETFYDEFELLHA 152
Query: 451 AELIKEYPGLKAWISFSCKDEKHTCHGDKFGLIARDV--YAKNPAQLVAVGVNC-LAP-H 506
+++++ + + + T +G+ I + + Y N VG+NC L P H
Sbjct: 153 VQVLRKETNIPIVAQLALHEAGTTQNGNDVNEILKQLLDYGAN-----VVGLNCQLGPLH 207
Query: 507 YVESL-LTSAGRDVPLLCCPNSG-ETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGG 564
E+ + S ++ L PN+G + G+ ++ + S + P++++ G++ +GG
Sbjct: 208 MTEAFKMISIPKNGYLSAYPNAGLPNYVEGRYVY--EGSPAYFEAMTPKFIEQGIRLLGG 265
Query: 565 CCRTNADDMKNVNQVPVKFSITP 587
CC T + ++++ + + ++TP
Sbjct: 266 CCGTTPEHIESMKRATL--NVTP 286
Score = 101 (40.6 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 312 SNRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAI 370
S+ +I H+ YV AG D++ TNTY A+ E ++ GL E+Q ++ R AVK K ++
Sbjct: 37 SDPDLIISIHKQYVAAGADVIQTNTYGAN-EAKLRMYGL-ENQVTEINRAAVKLAKASV 93
>TIGR_CMR|SPO_3398 [details] [associations]
symbol:SPO_3398 "homocysteine S-methyltransferase family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152
"metabolic process" evidence=ISS] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=ISS] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 HOGENOM:HOG000265278 RefSeq:YP_168594.1
ProteinModelPortal:Q5LN14 GeneID:3195042 KEGG:sil:SPO3398
PATRIC:23380251 OMA:NSYALVP ProtClustDB:CLSK934146 Uniprot:Q5LN14
Length = 298
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 83/306 (27%), Positives = 121/306 (39%)
Query: 288 LSKHVGEDNVT---EKDNPLWCSAFLHSNRQAVIDTHRDYVRAGCDIVTTNTYQASVEGF 344
L +G++ V ++ PLW ++ + V HRDY AG I TTNTY A +
Sbjct: 7 LDGSIGQELVKRAGKRPTPLWSTSVMLEAPYHVGAVHRDYFDAGATIATTNTY-AVLRDR 65
Query: 345 VQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRHVRVAGSLGSYGAFLHDGSEY 404
++ G+ D+ LI D AL++ A R+AG+LG GA Y
Sbjct: 66 LEPAGIG-DRFEALI-DT--------ALDQAESARAAHGSGRIAGALGPLGA------SY 109
Query: 405 RGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLP--AQEEAMVLAELIKEYPGLKA 462
R D P+E + + A+ +DL IET AQ E + + P
Sbjct: 110 RPDICPP--PEEAEALYADSVRAM-NDRVDLFLIETAASVAQAEGALRGASLGTKP---V 163
Query: 463 WISFSCKDE--KHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLAPHYVESLLTS-AGRDV 519
W+S + D+ G+ G +A V P AV VNC P V + L AG +
Sbjct: 164 WLSVTVMDDDGSRLRSGEGVGELAAIVKQYQPQ---AVLVNCSRPEAVAAALDIIAGFGL 220
Query: 520 PLLCCPNS----GETF---DPG-QRIWMNKDSVPSVDT-YVPRWLDTGVKYVGGCCRTNA 570
P N E F P + + D P + W+D VGGCC
Sbjct: 221 PFGAYANGFTRITEAFLESRPTVEALTARVDLTPEAYADFALGWVDQSATIVGGCCEVGP 280
Query: 571 DDMKNV 576
D + ++
Sbjct: 281 DHIAHL 286
>WB|WBGene00010988 [details] [associations]
symbol:metr-1 species:6239 "Caenorhabditis elegans"
[GO:0042558 "pteridine-containing compound metabolic process"
evidence=IEA] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] [GO:0008705 "methionine synthase activity"
evidence=IEA] [GO:0009086 "methionine biosynthetic process"
evidence=IEA] [GO:0031419 "cobalamin binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR000489 InterPro:IPR003726 InterPro:IPR003759
InterPro:IPR004223 InterPro:IPR006158 InterPro:IPR011005
InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310 Pfam:PF02574
Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381 PROSITE:PS50970
PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332 PROSITE:PS51337
SMART:SM01018 GO:GO:0032940 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 UniPathway:UPA00051 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 EMBL:Z46828 Gene3D:3.40.50.280 SUPFAM:SSF52242
GO:GO:0008705 eggNOG:COG1410 HOGENOM:HOG000251409 KO:K00548
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 PIR:T23868
RefSeq:NP_496353.1 ProteinModelPortal:Q09582 SMR:Q09582
DIP:DIP-26122N IntAct:Q09582 MINT:MINT-1116270 STRING:Q09582
PaxDb:Q09582 EnsemblMetazoa:R03D7.1 GeneID:174681
KEGG:cel:CELE_R03D7.1 UCSC:R03D7.1 CTD:174681 WormBase:R03D7.1
GeneTree:ENSGT00420000029824 InParanoid:Q09582 OMA:VRKEFWG
NextBio:885042 Uniprot:Q09582
Length = 1249
Score = 159 (61.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 84/336 (25%), Positives = 142/336 (42%)
Query: 272 ILENKLYLIDGGFSSQLSKHVGEDN------VTEKDNPLWCSAFLHS-NRQAVI-DTHRD 323
I + ++ +IDG + + + E+ + + D PL + L S R +I H+
Sbjct: 13 IAKERIMIIDGAMGTMIQREYMEEEDFRGEILKDHDKPLKGNNDLLSITRPDIIYKIHKL 72
Query: 324 YVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASR 383
Y+ AG D V TNT+ + + ++ + L+ + + Y +A D A+
Sbjct: 73 YLEAGADFVETNTFSGTT------IAQADYRCEHLVHE-INYQSALVARRACDDVGAATG 125
Query: 384 HVR-VAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETL- 441
R V G++G L + T QEL+ + + +LIQGG+D+L +ET+
Sbjct: 126 RRRYVCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLLVETVF 185
Query: 442 -PAQEEAMVLA--ELIKE--YPGLKAWISFSCKDEKHTCHGDKFGLIARDVYAKNPAQLV 496
A +A + A L ++ P + ++S + D + G A V K + +
Sbjct: 186 DSANAKAALFAIRTLFEDEGVPEMPVFLSGTIVDMSGRTLSGQTGE-AFLVSTKQ-GKPM 243
Query: 497 AVGVNC-LAPHYVESLLTSAGR--DVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPR 553
AVG+NC L + + + + D ++C PN+G G D P V R
Sbjct: 244 AVGLNCALGAKDMRQFVDNMSKWSDSFIICYPNAGLPNALG-----GYDETPEEMADVLR 298
Query: 554 WL--DTGVKYVGGCCRTNADDMKNVNQVPVKFSITP 587
D V +GGCC T D + N V+ ITP
Sbjct: 299 EFARDGLVNIIGGCCGTTPDHI-NAMYKAVQ-GITP 332
>UNIPROTKB|Q9KUW9 [details] [associations]
symbol:metH "Methionine synthase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0008705 "methionine
synthase activity" evidence=ISS] [GO:0009086 "methionine
biosynthetic process" evidence=ISS] InterPro:IPR000489
InterPro:IPR003726 InterPro:IPR003759 InterPro:IPR004223
InterPro:IPR006158 InterPro:IPR011005 InterPro:IPR011822
Pfam:PF00809 Pfam:PF02310 Pfam:PF02574 Pfam:PF02607 Pfam:PF02965
PIRSF:PIRSF000381 PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974
PROSITE:PS51332 PROSITE:PS51337 SMART:SM01018 GO:GO:0046872
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270 GO:GO:0005622
UniPathway:UPA00051 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
eggNOG:COG1410 KO:K00548 Gene3D:1.10.1240.10 Gene3D:3.10.196.10
PANTHER:PTHR21091:SF9 SUPFAM:SSF56507 SUPFAM:SSF47644
TIGRFAMs:TIGR02082 ProtClustDB:PRK09490 OMA:RNQPVEK PIR:E82328
RefSeq:NP_230044.1 ProteinModelPortal:Q9KUW9 SMR:Q9KUW9
PRIDE:Q9KUW9 DNASU:2614987 GeneID:2614987 KEGG:vch:VC0390
PATRIC:20079861 Uniprot:Q9KUW9
Length = 1226
Score = 153 (58.9 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 83/354 (23%), Positives = 145/354 (40%)
Query: 261 LSKDLQKINEFILENKLYLIDGGFSSQLSKH-VGEDNVTEKDNPLW-CSA------FLHS 312
+ K++++ E L+ ++ LIDGG + + + + E++ W C + +
Sbjct: 1 MGKEVRQQLEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLT 60
Query: 313 NRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIAL 372
Q + + H Y+ AG DI+ TNT+ ++ + + S ++ A K +E
Sbjct: 61 QPQIIKEIHSAYLEAGADILETNTFNSTTIAMADYD--MQSLSAEINFAAAKLAREVADE 118
Query: 373 EEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGG 432
+DP SR VAG LG + + T L++ + ALI+GG
Sbjct: 119 WTAKDP---SRPRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGG 175
Query: 433 IDLLAIET----LPAQEEAMVLAELIKEYP-GLKAWISFSCKDEK-HTCHGDKFGLIARD 486
DL+ IET L A+ A + + +E L IS + D T G
Sbjct: 176 SDLILIETIFDTLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNA 235
Query: 487 VYAKNPAQLVAVGVNC-LAP----HYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNK 541
+ P ++ G+NC L P YVE L S + + PN+G G+
Sbjct: 236 LRHVRP---ISFGLNCALGPDELRQYVEEL--SRISECYVSAHPNAGLPNAFGEYDL--- 287
Query: 542 DSVPSVDTYVPRWLDTG-VKYVGGCCRTNADDMKNVNQVPVKFSITPESLTNAR 594
S + ++ W G + VGGCC T + + + + V+ + P +L + +
Sbjct: 288 -SAEEMAEHIAEWAQAGFLNLVGGCCGTTPEHIAAIAKA-VE-GVKPRALPDLK 338
>TIGR_CMR|VC_0390 [details] [associations]
symbol:VC_0390 "5-methyltetrahydrofolate--homocysteine
methyltransferase" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0008705 "methionine synthase activity" evidence=ISS]
[GO:0009086 "methionine biosynthetic process" evidence=ISS]
InterPro:IPR000489 InterPro:IPR003726 InterPro:IPR003759
InterPro:IPR004223 InterPro:IPR006158 InterPro:IPR011005
InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310 Pfam:PF02574
Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381 PROSITE:PS50970
PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332 PROSITE:PS51337
SMART:SM01018 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0005622 UniPathway:UPA00051 GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20
SUPFAM:SSF51717 GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242
GO:GO:0008705 eggNOG:COG1410 KO:K00548 Gene3D:1.10.1240.10
Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9 SUPFAM:SSF56507
SUPFAM:SSF47644 TIGRFAMs:TIGR02082 ProtClustDB:PRK09490 OMA:RNQPVEK
PIR:E82328 RefSeq:NP_230044.1 ProteinModelPortal:Q9KUW9 SMR:Q9KUW9
PRIDE:Q9KUW9 DNASU:2614987 GeneID:2614987 KEGG:vch:VC0390
PATRIC:20079861 Uniprot:Q9KUW9
Length = 1226
Score = 153 (58.9 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 83/354 (23%), Positives = 145/354 (40%)
Query: 261 LSKDLQKINEFILENKLYLIDGGFSSQLSKH-VGEDNVTEKDNPLW-CSA------FLHS 312
+ K++++ E L+ ++ LIDGG + + + + E++ W C + +
Sbjct: 1 MGKEVRQQLEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLT 60
Query: 313 NRQAVIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIAL 372
Q + + H Y+ AG DI+ TNT+ ++ + + S ++ A K +E
Sbjct: 61 QPQIIKEIHSAYLEAGADILETNTFNSTTIAMADYD--MQSLSAEINFAAAKLAREVADE 118
Query: 373 EEKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGG 432
+DP SR VAG LG + + T L++ + ALI+GG
Sbjct: 119 WTAKDP---SRPRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGG 175
Query: 433 IDLLAIET----LPAQEEAMVLAELIKEYP-GLKAWISFSCKDEK-HTCHGDKFGLIARD 486
DL+ IET L A+ A + + +E L IS + D T G
Sbjct: 176 SDLILIETIFDTLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNA 235
Query: 487 VYAKNPAQLVAVGVNC-LAP----HYVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNK 541
+ P ++ G+NC L P YVE L S + + PN+G G+
Sbjct: 236 LRHVRP---ISFGLNCALGPDELRQYVEEL--SRISECYVSAHPNAGLPNAFGEYDL--- 287
Query: 542 DSVPSVDTYVPRWLDTG-VKYVGGCCRTNADDMKNVNQVPVKFSITPESLTNAR 594
S + ++ W G + VGGCC T + + + + V+ + P +L + +
Sbjct: 288 -SAEEMAEHIAEWAQAGFLNLVGGCCGTTPEHIAAIAKA-VE-GVKPRALPDLK 338
>UNIPROTKB|Q0C0E4 [details] [associations]
symbol:HNE_2102 "Putative metionine synthase, homocysteine
S-methyltransferase subunit" species:228405 "Hyphomonas neptunium
ATCC 15444" [GO:0009086 "methionine biosynthetic process"
evidence=ISS] InterPro:IPR003726 InterPro:IPR011822 Pfam:PF02574
PIRSF:PIRSF000381 PROSITE:PS50970 GO:GO:0008270 GO:GO:0009086
EMBL:CP000158 GenomeReviews:CP000158_GR eggNOG:COG0646
GO:GO:0008898 Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419
GO:GO:0008705 RefSeq:YP_760799.1 ProteinModelPortal:Q0C0E4
STRING:Q0C0E4 GeneID:4288312 KEGG:hne:HNE_2102 PATRIC:32217047
HOGENOM:HOG000265279 OMA:ETPEVTS ProtClustDB:CLSK890806
BioCyc:HNEP228405:GI69-2125-MONOMER Uniprot:Q0C0E4
Length = 352
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 82/337 (24%), Positives = 139/337 (41%)
Query: 262 SKDLQKINEFILENKLYLIDGGFSSQLSKH--VGED----NVTEKDNPL-WCSAFLHSNR 314
S+D K E + ++ ++DG +Q+ + ED + + PL + L+ R
Sbjct: 3 SQDRFKALEALANQRILVLDGAMGTQIQNYKLTEEDFQGNRFGDWEIPLKGNNDLLNLTR 62
Query: 315 QAVI-DTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALE 373
VI + HR Y+ AG D V TNT+ A+ + E + ++ R+ + ++ +
Sbjct: 63 PDVIGEIHRKYIDAGADFVETNTFSATTIAMADYK--MEALAAEIAREGARIARD---VA 117
Query: 374 EKRDPAIASRHVRVAGSLGSYGAFLHDGSEYRGD-YIDSTTPQELIDYHRPRIEALIQGG 432
+K + + R V V G++G L Y D T Q Y + EA+
Sbjct: 118 DKAEAELG-RPVGVMGAIGPTNKTLSLSPNVNDPGYRDVTFDQVREAYFE-QAEAMAPF- 174
Query: 433 IDLLAIETL--PAQEEAMVLAEL-IKEYPG--LKAWISFSCKDEK-HTCHGDKFGLIARD 486
ID+ IET+ +A + A + ++E G L IS + D T G
Sbjct: 175 IDVFLIETVFDTLNAKAAIKALIDLREQKGIDLPIIISGTITDASGRTLSGQTAEAFWNS 234
Query: 487 VYAKNPAQLVAVGVNC-LAPHYVESLLTSAGR--DVPLLCCPNSGETFDPGQRIWMNKDS 543
V P A+G+NC L + + S R D ++ PN+G G+ D
Sbjct: 235 VRHARPW---AIGLNCALGADLMRQHVASISRVADTRVIAYPNAGLPNAFGEY-----DE 286
Query: 544 VPS-VDTYVPRWLDTG-VKYVGGCCRTNADDMKNVNQ 578
P ++ W ++G V +GGCC T+ + + Q
Sbjct: 287 TPDQTAAHLKEWANSGLVNVLGGCCGTSPGHIAAIAQ 323
>TIGR_CMR|GSU_2974 [details] [associations]
symbol:GSU_2974 "methylenetetrahydrofolate reductase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016491
"oxidoreductase activity" evidence=ISS] UniPathway:UPA00193
InterPro:IPR003171 InterPro:IPR003726 Pfam:PF02219 Pfam:PF02574
PROSITE:PS50970 GO:GO:0006555 GO:GO:0008652 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0035999 KO:K00547 GO:GO:0004489
RefSeq:NP_954016.1 ProteinModelPortal:Q748M7 GeneID:2687368
KEGG:gsu:GSU2974 PATRIC:22028805 HOGENOM:HOG000028409 OMA:QSHLMGL
ProtClustDB:PRK08645 BioCyc:GSUL243231:GH27-2948-MONOMER
Uniprot:Q748M7
Length = 605
Score = 120 (47.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 47/178 (26%), Positives = 75/178 (42%)
Query: 405 RGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWI 464
+GD + QE +D R + AL +G +DLL +ET + +E GL
Sbjct: 113 KGDE-QELSAQETVDIFRRQTHALAEGEVDLLILETFTDLAQMRHALTAARE-TGLPVVA 170
Query: 465 SFSCKDEKHTCHGDKFGLIARDVYAKNPAQLVAVGVNCLA-PHYVESLLTSAGR--DVPL 521
+ + + G + +A ++ A A VG NC A P + + GR D+PL
Sbjct: 171 NMAFLENGRLAGGIEVERVAVELTA---AGACVVGANCGAGPLEILGTIQRMGRVTDLPL 227
Query: 522 LCCPNSG-ETFDPGQRIWMNKDSVPSVDTYVPRWLDTGVKYVGGCCRTNADDMKNVNQ 578
PNSG + G+ ++ D V + G VGGCC T + ++ + Q
Sbjct: 228 AAYPNSGFPEYVNGRHVYRTTPDY-FADRAV-EMVGAGAALVGGCCGTTPEHVRCLAQ 283
Score = 65 (27.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 317 VIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEA 369
V++ HR+Y+ AG ++ TNT+ A+ +GL + + +R A + +EA
Sbjct: 44 VLELHREYLAAGARVIETNTFGANWTRLAA-IGLEKKEREINLRGA-QLAREA 94
>UNIPROTKB|E1BSH9 [details] [associations]
symbol:BHMT "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0047150 "betaine-homocysteine S-methyltransferase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008898
"homocysteine S-methyltransferase activity" evidence=IEA]
[GO:0009086 "methionine biosynthetic process" evidence=IEA]
InterPro:IPR003726 InterPro:IPR017226 Pfam:PF02574
PIRSF:PIRSF037505 PROSITE:PS50970 GO:GO:0005737 GO:GO:0008270
GO:GO:0009086 CTD:635 GeneTree:ENSGT00390000003122 KO:K00544
OMA:CNKQGFI GO:GO:0047150 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 EMBL:AADN02046136 IPI:IPI00601144
RefSeq:XP_414685.1 ProteinModelPortal:E1BSH9 PRIDE:E1BSH9
Ensembl:ENSGALT00000007194 GeneID:416371 KEGG:gga:416371
NextBio:20819838 Uniprot:E1BSH9
Length = 405
Score = 98 (39.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 56/222 (25%), Positives = 90/222 (40%)
Query: 365 YVKEAIALEEKRDPAI-ASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRP 423
YV E I ++ + A +R V G A + G Y+ E+ R
Sbjct: 91 YVAEKITCQKVNEAACDIAREVANEGD-----ALVAGGVSQTPSYLSCKDKAEVKAVFRK 145
Query: 424 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLI 483
+++ ++ +D L E EEA+ E++KE G K + C + HG G
Sbjct: 146 QLDIFMKKNVDFLIAEYFEHVEEAVWAVEVLKE-SG-KPVAATMCIGPEGDMHGVPPGQC 203
Query: 484 ARDVYAKNPAQLVAVGVNC-LAPHYV-ESL------LTSAGRDVPLLCCPNSGETFDPGQ 535
A + K A +V GVNC P V E++ L +A L+ P + T D G+
Sbjct: 204 AVQL-VKAGASIV--GVNCHFDPDTVLETVKLMKEGLQAAKLKAHLMSQPLAFHTPDCGK 260
Query: 536 RIWMNKDSVP-----------SVDTYVPRWLDTGVKYVGGCC 566
+ +++ P V Y + D G++Y+GGCC
Sbjct: 261 QGFIDLPEFPFGLEPRIITRWDVQKYARKAYDLGIRYIGGCC 302
Score = 81 (33.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 261 LSKDLQKINEFILEN----KLYLIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQA 316
++K L++ ILE ++ + DGGF L K G K P W + +A
Sbjct: 4 IAKSLKQGKRGILERLDAGEIVIGDGGFVFALEKR-GY----VKAGP-WTPEATVEHPEA 57
Query: 317 VIDTHRDYVRAGCDIVTTNTYQASVEGFVQHLG--LSEDQSVQLIRDAVKYVKEAIALE 373
V HR+++RAG +++ T T+ AS E +++ G ++E + Q + +A + +A E
Sbjct: 58 VRQLHREFLRAGSNVLQTFTFYAS-EDKLENRGNYVAEKITCQKVNEAACDIAREVANE 115
>TIGR_CMR|SO_1030 [details] [associations]
symbol:SO_1030 "5-methyltetrahydrofolate--homocysteine
methyltransferase" species:211586 "Shewanella oneidensis MR-1"
[GO:0008705 "methionine synthase activity" evidence=ISS]
[GO:0009086 "methionine biosynthetic process" evidence=ISS]
InterPro:IPR000489 InterPro:IPR003726 InterPro:IPR003759
InterPro:IPR004223 InterPro:IPR006158 InterPro:IPR011005
InterPro:IPR011822 Pfam:PF00809 Pfam:PF02310 Pfam:PF02574
Pfam:PF02607 Pfam:PF02965 PIRSF:PIRSF000381 PROSITE:PS50970
PROSITE:PS50972 PROSITE:PS50974 PROSITE:PS51332 PROSITE:PS51337
SMART:SM01018 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008898
Gene3D:3.20.20.330 SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20
SUPFAM:SSF51717 GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242
GO:GO:0008705 HSSP:P13009 HOGENOM:HOG000251409 KO:K00548
Gene3D:1.10.1240.10 Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9
SUPFAM:SSF56507 SUPFAM:SSF47644 TIGRFAMs:TIGR02082 OMA:VRKEFWG
ProtClustDB:PRK09490 RefSeq:NP_716658.1 ProteinModelPortal:Q8EI23
SMR:Q8EI23 GeneID:1168870 KEGG:son:SO_1030 PATRIC:23521707
Uniprot:Q8EI23
Length = 1244
Score = 136 (52.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 70/289 (24%), Positives = 117/289 (40%)
Query: 321 HRDYVRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAI-ALEEKRDPA 379
H DY+ AG DI+ TNT+ A+ + + S ++ R+ + +EA A+E+
Sbjct: 75 HTDYLLAGADIIETNTFNATTIAMADYD--MQSLSAEINREGARLAREACDAIEQATGKP 132
Query: 380 IASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIE 439
R+V AG LG + + EL+ + ALI+GG D++ +E
Sbjct: 133 ---RYV--AGVLGPTNRTCSISPDVNDPGFRNIHFDELVTAYCESTRALIEGGADIIMVE 187
Query: 440 T----LPAQEEAMVLAELIKEYPG------LKAWISFSCKDEK-HTCHGDKFGLIARDVY 488
T L A+ + + E G L IS + D T G +
Sbjct: 188 TIFDTLNAKAALFAIETVFDELFGANSPARLPVMISGTITDASGRTLTGQTTEAFYNSLR 247
Query: 489 AKNPAQLVAVGVNC-LAPH----YVESLLTSAGRDVPLLCCPNSGETFDPGQRIWMNKDS 543
P +++G+NC L P YVE L A + + PN+G + G D
Sbjct: 248 HIKP---LSIGLNCALGPKELRPYVEELSRIA--ECYVSAHPNAGLPNEFG-----GYDE 297
Query: 544 VPS-VDTYVPRWLDTGV-KYVGGCCRTNADDMKNVNQVPVKFS--ITPE 588
P + + W G+ +GGCC + + +K + + +F+ + PE
Sbjct: 298 TPEDMAKVIQEWAREGMLNIIGGCCGSTPEHIKVIREAVEQFAPRVLPE 346
>UNIPROTKB|P13009 [details] [associations]
symbol:metH species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008705 "methionine
synthase activity" evidence=IEA;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0042558 "pteridine-containing compound metabolic
process" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0031419 "cobalamin binding" evidence=IEA;IDA] [GO:0008898
"homocysteine S-methyltransferase activity" evidence=IEA;IDA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA;IMP]
[GO:0008168 "methyltransferase activity" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] InterPro:IPR000489
InterPro:IPR003726 InterPro:IPR003759 InterPro:IPR004223
InterPro:IPR006158 InterPro:IPR011005 InterPro:IPR011822
Pfam:PF00809 Pfam:PF02310 Pfam:PF02574 Pfam:PF02607 Pfam:PF02965
PIRSF:PIRSF000381 PROSITE:PS50970 PROSITE:PS50972 PROSITE:PS50974
PROSITE:PS51332 PROSITE:PS51337 SMART:SM01018 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0008270 EMBL:U00006
UniPathway:UPA00051 GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 GO:GO:0031419 Gene3D:3.20.20.20 SUPFAM:SSF51717
GO:GO:0042558 Gene3D:3.40.50.280 SUPFAM:SSF52242 GO:GO:0008705
eggNOG:COG1410 HOGENOM:HOG000251409 KO:K00548 Gene3D:1.10.1240.10
Gene3D:3.10.196.10 PANTHER:PTHR21091:SF9 SUPFAM:SSF56507
SUPFAM:SSF47644 TIGRFAMs:TIGR02082 OMA:VRKEFWG EMBL:X16584
EMBL:J04975 PIR:B65209 RefSeq:NP_418443.1 RefSeq:YP_492162.1
PDB:1BMT PDB:1K7Y PDB:1K98 PDB:1MSK PDB:3BUL PDB:3IV9 PDB:3IVA
PDBsum:1BMT PDBsum:1K7Y PDBsum:1K98 PDBsum:1MSK PDBsum:3BUL
PDBsum:3IV9 PDBsum:3IVA ProteinModelPortal:P13009 SMR:P13009
IntAct:P13009 SWISS-2DPAGE:P13009 PaxDb:P13009 PRIDE:P13009
EnsemblBacteria:EBESCT00000002831 EnsemblBacteria:EBESCT00000018146
GeneID:12934458 GeneID:948522 KEGG:ecj:Y75_p3906 KEGG:eco:b4019
PATRIC:32123567 EchoBASE:EB0582 EcoGene:EG10587
ProtClustDB:PRK09490 BioCyc:EcoCyc:HOMOCYSMETB12-MONOMER
BioCyc:ECOL316407:JW3979-MONOMER
BioCyc:MetaCyc:HOMOCYSMETB12-MONOMER EvolutionaryTrace:P13009
Genevestigator:P13009 Uniprot:P13009
Length = 1227
Score = 133 (51.9 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 68/311 (21%), Positives = 118/311 (37%)
Query: 273 LENKLYLIDGGFSSQLSKH-VGEDNVTEKDNPLW-CSA------FLHSNRQAVIDTHRDY 324
L ++ ++DGG + + + + E + + W C + S + + H Y
Sbjct: 12 LNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAY 71
Query: 325 VRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAIASRH 384
AG DI+ TNT+ ++ + E S ++ A K + R P R+
Sbjct: 72 FEAGADIIETNTFNSTTIAMADYQ--MESLSAEINFAAAKLARACADEWTARTPE-KPRY 128
Query: 385 VRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIETLPAQ 444
V AG LG + + T L+ +R +AL++GG DL+ IET+
Sbjct: 129 V--AGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILIETVFDT 186
Query: 445 EEAMVLAELIK-EYPGLKAWISFSCKDEKHTCHGDKF-GLIARDVY-AKNPAQLVAVGVN 501
A +K E+ L + G G Y + A+ + G+N
Sbjct: 187 LNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEALTFGLN 246
Query: 502 C-LAPHYVESLLTSAGR--DVPLLCCPNSGETFDPGQRIWMNKDSVPSVDTYVPRWLDTG 558
C L P + + R + + PN+G G+ ++ D++ + W G
Sbjct: 247 CALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYD-LDADTMAK---QIREWAQAG 302
Query: 559 -VKYVGGCCRT 568
+ VGGCC T
Sbjct: 303 FLNIVGGCCGT 313
>TIGR_CMR|SPO_1884 [details] [associations]
symbol:SPO_1884 "homocysteine S-methyltransferase family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152
"metabolic process" evidence=ISS] [GO:0008898 "homocysteine
S-methyltransferase activity" evidence=ISS] InterPro:IPR003726
Pfam:PF02574 PROSITE:PS50970 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008898 Gene3D:3.20.20.330
SUPFAM:SSF82282 HOGENOM:HOG000265278 KO:K00548 RefSeq:YP_167121.1
ProteinModelPortal:Q5LS84 GeneID:3193239 KEGG:sil:SPO1884
PATRIC:23377101 OMA:VAWIETM ProtClustDB:PRK07534 Uniprot:Q5LS84
Length = 339
Score = 114 (45.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 53/196 (27%), Positives = 83/196 (42%)
Query: 381 ASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRPRIEALIQGGIDLLAIET 440
A R V VAGS+G G + + S + ++ + E L +GG+D+L +ET
Sbjct: 101 AGRKVIVAGSVGPTGEIMEP--------VGSLSHAAAVEMFHEQAEGLKEGGVDVLWLET 152
Query: 441 LPAQEEAMVLAELIKEYPGLKAWI-SFSCKDEKHTCHGDKFGLIARDVYA-KNPAQLVAV 498
+ A EE AE G+ W + S T G +A+ V NP +A
Sbjct: 153 ISAPEEFRAAAEAFA-LAGMP-WCGTMSFDTAGRTMMGVTSADMAQLVETLPNPP--LAF 208
Query: 499 GVNCL--APHYVESLL--TSAGRDVPLLCCPNSG-ETFDPGQRIWMNKDSVPSV-DTYVP 552
G NC A + ++L + G + ++ N+G + G ++ D P + Y
Sbjct: 209 GANCGTGASDILRTVLGFVAQGTERAIISKGNAGIPKYVDGH---IHYDGTPELMGVYAT 265
Query: 553 RWLDTGVKYVGGCCRT 568
D G K +GGCC T
Sbjct: 266 MARDAGAKIIGGCCGT 281
Score = 53 (23.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 325 VRAGCDIVTTNTYQASVEGFVQHLGLSEDQSVQLIRDAVKYVKEAIALEEKRDPAI-ASR 383
V+AG D+ TNT+ G L L E Q +R+ + + E R+ A A R
Sbjct: 55 VQAGSDLFLTNTFG----GTAARLKLHEAQG--RVRELNR-----VGAELGREVADRAGR 103
Query: 384 HVRVAGSLGSYGAFL 398
V VAGS+G G +
Sbjct: 104 KVIVAGSVGPTGEIM 118
>UNIPROTKB|Q5I597 [details] [associations]
symbol:BHMT "Betaine--homocysteine S-methyltransferase 1"
species:9913 "Bos taurus" [GO:0006579 "amino-acid betaine catabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0047150 "betaine-homocysteine S-methyltransferase activity"
evidence=IEA] [GO:0009086 "methionine biosynthetic process"
evidence=IEA] [GO:0008898 "homocysteine S-methyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR003726 InterPro:IPR017226 Pfam:PF02574
PIRSF:PIRSF037505 PROSITE:PS50970 UniPathway:UPA00291 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 UniPathway:UPA00051 GO:GO:0009086
EMBL:AY854632 EMBL:BC112599 IPI:IPI00687917 RefSeq:NP_001011679.1
UniGene:Bt.16399 ProteinModelPortal:Q5I597 SMR:Q5I597 STRING:Q5I597
PRIDE:Q5I597 Ensembl:ENSBTAT00000002916 GeneID:497025
KEGG:bta:497025 CTD:635 eggNOG:COG0646 GeneTree:ENSGT00390000003122
HOGENOM:HOG000231636 HOVERGEN:HBG080367 InParanoid:Q5I597 KO:K00544
OMA:CNKQGFI OrthoDB:EOG4001JM BioCyc:CATTLE:497025-MONOMER
NextBio:20865838 GO:GO:0047150 GO:GO:0008898 GO:GO:0006579
Gene3D:3.20.20.330 SUPFAM:SSF82282 Uniprot:Q5I597
Length = 407
Score = 83 (34.3 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 54/222 (24%), Positives = 92/222 (41%)
Query: 365 YVKEAIALEEKRDPAI-ASRHVRVAGSLGSYGAFLHDGSEYRGDYIDSTTPQELIDYHRP 423
YV E I+ ++ + A +R V G A + G Y+ + E+ +
Sbjct: 89 YVAEKISGQKVNEAACDIARQVADEGD-----ALVAGGVSQTPSYLSCKSETEVKKVFQQ 143
Query: 424 RIEALIQGGIDLLAIETLPAQEEAMVLAELIKEYPGLKAWISFSCKDEKHTCHGDKFGLI 483
++E ++ +D L E EEA+ E +K G K + C + H G
Sbjct: 144 QLEVFVKKNVDFLIAEYFEHVEEAVWAVEALKA-SG-KPVAATMCIGPEGDLHSVTPGEC 201
Query: 484 ARDVYAKNPAQLVAVGVNC-----LAPHYVESL---LTSAGRDVPLLCCPNSGETFDPGQ 535
A + K A +V GVNC ++ V+ + L +AG L+ P + T D G+
Sbjct: 202 AVRL-VKAGASIV--GVNCHFDPTISLQTVKLMKEGLEAAGLKAHLMSQPLAYHTPDCGK 258
Query: 536 RIWMNKDSVP-SVDTYVP-RW---------LDTGVKYVGGCC 566
+ +++ P ++ V RW + GV+Y+GGCC
Sbjct: 259 QGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCC 300
Score = 81 (33.6 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 263 KDLQK-INEFILENKLYLIDGGFSSQLSKHVGEDNVTEKDNPLWCSAFLHSNRQAVIDTH 321
K+++K I E + ++ + DGGF L K G K P W + +AV H
Sbjct: 7 KNVKKGILERLNSGEVIIGDGGFVFALEKR-GY----VKAGP-WTPEAAVEHPEAVRQLH 60
Query: 322 RDYVRAGCDIVTTNTYQASVEGFVQHLG--LSEDQSVQLIRDAVKYVKEAIALE 373
R+++RAG +++ T T+ AS E +++ G ++E S Q + +A + +A E
Sbjct: 61 REFLRAGSNVMQTFTFYAS-EDKLENRGNYVAEKISGQKVNEAACDIARQVADE 113
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 698 698 0.00082 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 60
No. of states in DFA: 615 (65 KB)
Total size of DFA: 348 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.19u 0.14s 60.33t Elapsed: 00:00:09
Total cpu time: 60.20u 0.14s 60.34t Elapsed: 00:00:09
Start: Thu Aug 15 15:30:15 2013 End: Thu Aug 15 15:30:24 2013