Your job contains 1 sequence.
>psy13908
MVRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQK
IKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKMV
QQLRLATQFIEQAHVRVGPELEGDMIEGS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13908
(149 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-1062 - symbol:imp3 "IMP3, U3 small n... 492 5.4e-47 1
UNIPROTKB|F1MZR5 - symbol:IMP3 "U3 small nucleolar ribonu... 469 1.5e-44 1
UNIPROTKB|F1SJ73 - symbol:IMP3 "Uncharacterized protein" ... 466 3.1e-44 1
RGD|1306825 - symbol:Imp3 "IMP3, U3 small nucleolar ribon... 466 3.1e-44 1
UNIPROTKB|E2RL19 - symbol:IMP3 "Uncharacterized protein" ... 464 5.0e-44 1
UNIPROTKB|Q3T0M3 - symbol:IMP3 "U3 small nucleolar ribonu... 463 6.4e-44 1
MGI|MGI:1916119 - symbol:Imp3 "IMP3, U3 small nucleolar r... 461 1.0e-43 1
UNIPROTKB|Q9NV31 - symbol:IMP3 "U3 small nucleolar ribonu... 458 2.2e-43 1
FB|FBgn0034232 - symbol:CG4866 species:7227 "Drosophila m... 427 4.2e-40 1
SGD|S000001191 - symbol:IMP3 "Component of the SSU proces... 387 7.2e-36 1
CGD|CAL0005715 - symbol:orf19.7488 species:5476 "Candida ... 370 4.6e-34 1
UNIPROTKB|Q5AAK1 - symbol:IMP3 "Likely U3 snoRNP protein"... 370 4.6e-34 1
POMBASE|SPAC19D5.05c - symbol:imp3 "U3 snoRNP-associated ... 335 2.3e-30 1
TAIR|locus:2143196 - symbol:AT5G15750 species:3702 "Arabi... 331 6.2e-30 1
WB|WBGene00016740 - symbol:C48B6.2 species:6239 "Caenorha... 329 1.0e-29 1
UNIPROTKB|E1BW88 - symbol:E1BW88 "Uncharacterized protein... 314 3.9e-28 1
ASPGD|ASPL0000000714 - symbol:AN6171 species:162425 "Emer... 300 1.2e-26 1
DICTYBASE|DDB_G0278983 - symbol:imp3 "U3 small nucleolar ... 260 2.1e-22 1
GENEDB_PFALCIPARUM|PF14_0584 - symbol:PF14_0584 "ribosoma... 200 4.7e-16 1
UNIPROTKB|Q8IKM0 - symbol:PF14_0584 "Mitochondrial riboso... 200 4.7e-16 1
TAIR|locus:2178082 - symbol:AT5G39850 species:3702 "Arabi... 147 2.0e-10 1
DICTYBASE|DDB_G0289877 - symbol:rps9 "40S ribosomal prote... 140 1.1e-09 1
TAIR|locus:2150976 - symbol:AT5G15200 species:3702 "Arabi... 139 1.4e-09 1
ASPGD|ASPL0000071451 - symbol:AN4803 species:162425 "Emer... 133 5.9e-09 1
WB|WBGene00004478 - symbol:rps-9 species:6239 "Caenorhabd... 118 2.3e-07 1
SGD|S000000393 - symbol:RPS9B "Protein component of the s... 118 2.4e-07 1
POMBASE|SPAC24H6.07 - symbol:rps901 "40S ribosomal protei... 117 2.9e-07 1
SGD|S000006002 - symbol:RPS9A "Protein component of the s... 115 5.9e-07 1
POMBASE|SPBC29A3.12 - symbol:rps902 "40S ribosomal protei... 113 8.9e-07 1
UNIPROTKB|A6QLG5 - symbol:RPS9 "40S ribosomal protein S9"... 112 1.3e-06 1
UNIPROTKB|E2R8R8 - symbol:RPS9 "Uncharacterized protein" ... 112 1.3e-06 1
UNIPROTKB|P46781 - symbol:RPS9 "40S ribosomal protein S9"... 112 1.3e-06 1
UNIPROTKB|A9L913 - symbol:RPS9 "40S ribosomal protein S9"... 112 1.3e-06 1
MGI|MGI:1924096 - symbol:Rps9 "ribosomal protein S9" spec... 112 1.3e-06 1
RGD|619889 - symbol:Rps9 "ribosomal protein S9" species:1... 112 1.3e-06 1
UNIPROTKB|I3LEX0 - symbol:RPS9 "40S ribosomal protein S9"... 110 2.1e-06 1
ZFIN|ZDB-GENE-010724-15 - symbol:rps9 "ribosomal protein ... 110 2.1e-06 1
UNIPROTKB|C9JM19 - symbol:RPS9 "Ribosomal protein S9, iso... 108 2.6e-06 1
UNIPROTKB|B5MCT8 - symbol:RPS9 "40S ribosomal protein S9"... 103 9.0e-06 1
RGD|2320851 - symbol:LOC100364509 "ribosomal protein S9-l... 103 9.0e-06 1
FB|FBgn0010408 - symbol:RpS9 "Ribosomal protein S9" speci... 107 1.5e-05 1
RGD|1566136 - symbol:RGD1566136 "similar to 40S ribosomal... 105 5.1e-05 1
>ZFIN|ZDB-GENE-040426-1062 [details] [associations]
symbol:imp3 "IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast)" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002942
Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
ZFIN:ZDB-GENE-040426-1062 GO:GO:0003723 GO:GO:0030529
Gene3D:3.10.290.10 eggNOG:COG0522 HOGENOM:HOG000213883
HOVERGEN:HBG052121 OrthoDB:EOG4GB779 InterPro:IPR022801
PANTHER:PTHR11831 OMA:FIEQGHV GeneTree:ENSGT00550000075090
EMBL:CR956623 IPI:IPI00512987 UniGene:Dr.113818 SMR:A5WV64
Ensembl:ENSDART00000100709 Uniprot:A5WV64
Length = 183
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 94/144 (65%), Positives = 117/144 (81%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQK 60
MVRKLK+HEQKLLKKVDFI+WE DNN+HEVK++R++ I+KR+DYT YNKLSR IR LAQK
Sbjct: 1 MVRKLKFHEQKLLKKVDFINWEVDNNIHEVKVLRKYHIEKREDYTKYNKLSRNIRELAQK 60
Query: 61 IKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKMV 120
I+DLD KD FR +S+A LEKLY +GLI TK +L N+V+AS+FC+RRLP +M + +M
Sbjct: 61 IRDLDAKDGFRSQSTALFLEKLYSVGLIPTKQNLSLANEVSASAFCRRRLPTIMLKLRMA 120
Query: 121 QQLRLATQFIEQAHVRVGPELEGD 144
Q LR A FIEQ H+RVGPE+ D
Sbjct: 121 QNLRNAITFIEQGHIRVGPEVITD 144
>UNIPROTKB|F1MZR5 [details] [associations]
symbol:IMP3 "U3 small nucleolar ribonucleoprotein protein
IMP3" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 GO:GO:0005730 GO:GO:0019843
GO:GO:0006364 Gene3D:3.10.290.10 IPI:IPI00712796 UniGene:Bt.49031
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GeneTree:ENSGT00550000075090 EMBL:DAAA02052486
Ensembl:ENSBTAT00000016179 Uniprot:F1MZR5
Length = 184
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 85/145 (58%), Positives = 118/145 (81%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEA-DNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQ 59
MVRKLK+HEQKLLK+VDF++WE D+NLHE++++RR+ +Q+R+DYT YN+LSR +R LA+
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR 60
Query: 60 KIKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKM 119
+++DL +DPFRV SSA LL+KLY +GL+ T+ LE C+ VTASSFC+RRLP V+ + +M
Sbjct: 61 RLRDLPERDPFRVRSSAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRM 120
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
Q L+ A F+EQ HVRVGP++ D
Sbjct: 121 AQHLQAAVAFVEQGHVRVGPDVVTD 145
>UNIPROTKB|F1SJ73 [details] [associations]
symbol:IMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
Pfam:PF00163 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0005730 GO:GO:0019843 GO:GO:0006364 Gene3D:3.10.290.10
CTD:55272 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV GeneTree:ENSGT00550000075090 EMBL:CU582918
RefSeq:NP_001230221.1 UniGene:Ssc.2208 Ensembl:ENSSSCT00000002101
GeneID:100151831 KEGG:ssc:100151831 Uniprot:F1SJ73
Length = 184
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 84/145 (57%), Positives = 118/145 (81%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEA-DNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQ 59
MVRKLK+HEQKLLK+VDF++WE D+NLHE++++RR+ +Q+R+DYT YN+LSR +R LA+
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR 60
Query: 60 KIKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKM 119
+++DL +DPFRV +SA LL+KLY +GL+ T+ LE C+ VTASSFC+RRLP V+ + +M
Sbjct: 61 RLRDLPERDPFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRM 120
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
Q L+ A F+EQ HVRVGP++ D
Sbjct: 121 AQHLQAAVTFVEQGHVRVGPDVVTD 145
>RGD|1306825 [details] [associations]
symbol:Imp3 "IMP3, U3 small nucleolar ribonucleoprotein, homolog
(yeast)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 RGD:1306825 GO:GO:0005730
GO:GO:0030529 GO:GO:0019843 EMBL:CH473975 GO:GO:0006364
Gene3D:3.10.290.10 CTD:55272 eggNOG:COG0522 HOGENOM:HOG000213883
HOVERGEN:HBG052121 KO:K14560 OrthoDB:EOG4GB779 InterPro:IPR022801
PANTHER:PTHR11831 OMA:FIEQGHV GeneTree:ENSGT00550000075090
EMBL:BC166985 IPI:IPI00369733 RefSeq:NP_001101622.1 UniGene:Rn.3787
SMR:B2RZ12 STRING:B2RZ12 Ensembl:ENSRNOT00000023456 GeneID:315697
KEGG:rno:315697 UCSC:RGD:1306825 NextBio:669686
Genevestigator:B2RZ12 Uniprot:B2RZ12
Length = 184
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 82/145 (56%), Positives = 119/145 (82%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEA-DNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQ 59
MVRKLK+HEQKLLK+VDF++WE D+NLHE++++RR+G+Q+R++YT YN+LSR +R LA+
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYGLQRREEYTRYNQLSRAVRELAR 60
Query: 60 KIKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKM 119
+++DL +DPFRV +SA LL+KLY +GL+ T+ LE C+ V+ASSFC+RRLP ++ + +M
Sbjct: 61 RLRDLPERDPFRVRASAALLDKLYALGLVPTRGSLELCDSVSASSFCRRRLPTLLLKLRM 120
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
Q L+ A F+EQ HVRVGP++ D
Sbjct: 121 AQHLQAAVAFVEQGHVRVGPDVVTD 145
>UNIPROTKB|E2RL19 [details] [associations]
symbol:IMP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
Pfam:PF00163 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0005730 GO:GO:0019843 GO:GO:0006364 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GeneTree:ENSGT00550000075090 EMBL:AAEX03016335
Ensembl:ENSCAFT00000028655 NextBio:20861217 Uniprot:E2RL19
Length = 224
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 83/145 (57%), Positives = 118/145 (81%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEA-DNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQ 59
MVRKLK+HEQKLLK+VDF++WEA D+NLHE++++RR+ +Q+R+DYT YN+LSR +R LA+
Sbjct: 41 MVRKLKFHEQKLLKQVDFLNWEATDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR 100
Query: 60 KIKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKM 119
+++DL +DPFRV +SA LL+KLY +GL+ T+ L C+ VTAS+FC+RRLP V+ + +M
Sbjct: 101 RLRDLPERDPFRVRASAALLDKLYALGLVPTRGSLALCDSVTASAFCRRRLPTVLLKLRM 160
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
Q L+ A F+EQ HVRVGP++ D
Sbjct: 161 AQHLQAAVAFVEQGHVRVGPDVVTD 185
>UNIPROTKB|Q3T0M3 [details] [associations]
symbol:IMP3 "U3 small nucleolar ribonucleoprotein protein
IMP3" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
Pfam:PF00163 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0005730 GO:GO:0030529 GO:GO:0019843 GO:GO:0006364
Gene3D:3.10.290.10 EMBL:BC102331 IPI:IPI00712796
RefSeq:NP_001073056.1 UniGene:Bt.49031 ProteinModelPortal:Q3T0M3
SMR:Q3T0M3 STRING:Q3T0M3 GeneID:511560 KEGG:bta:511560 CTD:55272
eggNOG:COG0522 HOGENOM:HOG000213883 HOVERGEN:HBG052121
InParanoid:Q3T0M3 KO:K14560 OrthoDB:EOG4GB779 NextBio:20869987
InterPro:IPR022801 PANTHER:PTHR11831 Uniprot:Q3T0M3
Length = 184
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 84/145 (57%), Positives = 117/145 (80%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEA-DNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQ 59
MVRKLK+HEQKLLK+VDF++WE D+NLHE++++RR+ +Q+R+DYT YN+LSR +R LA+
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR 60
Query: 60 KIKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKM 119
+++DL +DPFRV SSA LL+KLY +GL+ T+ E C+ VTASSFC+RRLP V+ + +M
Sbjct: 61 RLRDLPERDPFRVRSSAALLDKLYALGLVPTRGSQELCDFVTASSFCRRRLPTVLLKLRM 120
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
Q L+ A F+EQ HVRVGP++ D
Sbjct: 121 AQHLQAAVAFVEQGHVRVGPDVVTD 145
>MGI|MGI:1916119 [details] [associations]
symbol:Imp3 "IMP3, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO;ISA] [GO:0006364 "rRNA processing" evidence=IGI]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0030519 "snoRNP
binding" evidence=ISA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 MGI:MGI:1916119
GO:GO:0005730 GO:GO:0030529 GO:GO:0019843 GO:GO:0030519
GO:GO:0006364 Gene3D:3.10.290.10 CTD:55272 eggNOG:COG0522
HOGENOM:HOG000213883 HOVERGEN:HBG052121 KO:K14560 OrthoDB:EOG4GB779
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV EMBL:BC009145
IPI:IPI00122383 RefSeq:NP_598737.1 UniGene:Mm.12864
ProteinModelPortal:Q921Y2 SMR:Q921Y2 STRING:Q921Y2
PhosphoSite:Q921Y2 PaxDb:Q921Y2 PRIDE:Q921Y2
Ensembl:ENSMUST00000034827 GeneID:102462 KEGG:mmu:102462
UCSC:uc009ptq.1 GeneTree:ENSGT00550000075090 InParanoid:Q921Y2
NextBio:355498 Bgee:Q921Y2 Genevestigator:Q921Y2
GermOnline:ENSMUSG00000032288 Uniprot:Q921Y2
Length = 184
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 82/145 (56%), Positives = 118/145 (81%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEA-DNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQ 59
MVRKLK+HEQKLLK+VDF++WE D+NLHE++++RR+ +Q+R++YT YN+LSR +R LA+
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREEYTRYNQLSRAVRELAR 60
Query: 60 KIKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKM 119
+++DL +DPFRV +SA LL+KLY MGL+ T+ LE C+ V+ASSFC+RRLP ++ + +M
Sbjct: 61 RLRDLPERDPFRVRASAALLDKLYAMGLVPTRGSLELCDSVSASSFCRRRLPTLLLKLRM 120
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
Q L+ A F+EQ HVRVGP++ D
Sbjct: 121 AQHLQAAVAFVEQGHVRVGPDVVTD 145
>UNIPROTKB|Q9NV31 [details] [associations]
symbol:IMP3 "U3 small nucleolar ribonucleoprotein protein
IMP3" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR002942 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
EMBL:CH471136 GO:GO:0030529 GO:GO:0019843 GO:GO:0006364
Gene3D:3.10.290.10 CleanEx:HS_IMP3 CTD:55272 eggNOG:COG0522
HOGENOM:HOG000213883 HOVERGEN:HBG052121 KO:K14560 OrthoDB:EOG4GB779
InterPro:IPR022801 PANTHER:PTHR11831 EMBL:AY050497 EMBL:AL136913
EMBL:AK001830 EMBL:AK057531 EMBL:AK223121 EMBL:BC006487
EMBL:BC011745 IPI:IPI00019488 RefSeq:NP_060755.1 UniGene:Hs.513043
PDB:2CQJ PDBsum:2CQJ ProteinModelPortal:Q9NV31 SMR:Q9NV31
IntAct:Q9NV31 MINT:MINT-1449196 STRING:Q9NV31 PhosphoSite:Q9NV31
DMDM:52783099 PaxDb:Q9NV31 PeptideAtlas:Q9NV31 PRIDE:Q9NV31
DNASU:55272 Ensembl:ENST00000314852 Ensembl:ENST00000403490
GeneID:55272 KEGG:hsa:55272 UCSC:uc002bat.2 GeneCards:GC15M075931
H-InvDB:HIX0172858 HGNC:HGNC:14497 MIM:612980 neXtProt:NX_Q9NV31
PharmGKB:PA25517 InParanoid:Q9NV31 OMA:FIEQGHV PhylomeDB:Q9NV31
ChiTaRS:IMP3 EvolutionaryTrace:Q9NV31 GenomeRNAi:55272
NextBio:59389 ArrayExpress:Q9NV31 Bgee:Q9NV31 Genevestigator:Q9NV31
GermOnline:ENSG00000177971 Uniprot:Q9NV31
Length = 184
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 83/145 (57%), Positives = 117/145 (80%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEA-DNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQ 59
MVRKLK+HEQKLLK+VDF++WE D+NLHE++++RR+ +Q+R+DYT YN+LSR +R LA+
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR 60
Query: 60 KIKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKM 119
+++DL +D FRV +SA LL+KLY +GL+ T+ LE C+ VTASSFC+RRLP V+ + +M
Sbjct: 61 RLRDLPERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRM 120
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
Q L+ A F+EQ HVRVGP++ D
Sbjct: 121 AQHLQAAVAFVEQGHVRVGPDVVTD 145
>FB|FBgn0034232 [details] [associations]
symbol:CG4866 species:7227 "Drosophila melanogaster"
[GO:0006412 "translation" evidence=ISS] [GO:0005761 "mitochondrial
ribosome" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 EMBL:AE013599 GO:GO:0005622
GO:GO:0019843 Gene3D:3.10.290.10 eggNOG:COG0522 KO:K14560
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GeneTree:ENSGT00550000075090 EMBL:AY071534 RefSeq:NP_001163174.1
RefSeq:NP_611224.1 UniGene:Dm.5878 SMR:Q7JZ53 IntAct:Q7JZ53
STRING:Q7JZ53 EnsemblMetazoa:FBtr0086940 GeneID:36976
KEGG:dme:Dmel_CG4866 UCSC:CG4866-RA FlyBase:FBgn0034232
InParanoid:Q7JZ53 OrthoDB:EOG42281Z GenomeRNAi:36976 NextBio:801327
Uniprot:Q7JZ53
Length = 181
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 83/144 (57%), Positives = 106/144 (73%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQK 60
MVRKLK+HEQKLLKKVDFI+W+ DN E KI+RRF IQKR+DYT YNKLSR IR LA++
Sbjct: 1 MVRKLKFHEQKLLKKVDFITWKVDNGGKENKILRRFHIQKREDYTKYNKLSREIRELAER 60
Query: 61 IKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKMV 120
I LD +PF+ E++ LL KL+ MG+ + LE K++AS FC+RRLPV+M + +M
Sbjct: 61 IAKLDASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLRMS 120
Query: 121 QQLRLATQFIEQAHVRVGPELEGD 144
+ L+ AT IE HVRVGPE+ D
Sbjct: 121 EHLKAATDLIEHGHVRVGPEMIKD 144
>SGD|S000001191 [details] [associations]
symbol:IMP3 "Component of the SSU processome" species:4932
"Saccharomyces cerevisiae" [GO:0030515 "snoRNA binding"
evidence=ISS;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA;TAS] [GO:0034457 "Mpp10 complex" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0032040 "small-subunit processome"
evidence=IMP;IDA] InterPro:IPR001912 InterPro:IPR002942
Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 SGD:S000001191 EMBL:BK006934 GO:GO:0030515
GO:GO:0019843 EMBL:U10397 GO:GO:0006364 GO:GO:0032040
Gene3D:3.10.290.10 eggNOG:COG0522 HOGENOM:HOG000213883 KO:K14560
InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GeneTree:ENSGT00550000075090 OrthoDB:EOG48PQVF EMBL:X69480
EMBL:AY558388 PIR:S33911 RefSeq:NP_012018.1
ProteinModelPortal:P32899 SMR:P32899 DIP:DIP-5009N IntAct:P32899
MINT:MINT-475962 STRING:P32899 PaxDb:P32899 PeptideAtlas:P32899
EnsemblFungi:YHR148W GeneID:856553 KEGG:sce:YHR148W CYGD:YHR148w
NextBio:982363 Genevestigator:P32899 GermOnline:YHR148W
GO:GO:0034457 Uniprot:P32899
Length = 183
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 76/145 (52%), Positives = 101/145 (69%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQK 60
MVRKLK+HEQKLLKKVDF+ W+ D + ++MR + IQ R+DY YN++ IR LA K
Sbjct: 1 MVRKLKHHEQKLLKKVDFLEWKQDQGHRDTQVMRTYHIQNREDYHKYNRICGDIRRLANK 60
Query: 61 IKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENC-NKVTASSFCKRRLPVVMYRNKM 119
+ L P DPFR + LL+KLY MG++ TK + + NKVT S+ C+RRLPV+M+R KM
Sbjct: 61 LSLLPPTDPFRRKHEQLLLDKLYAMGVLTTKSKISDLENKVTVSAICRRRLPVIMHRLKM 120
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
+ ++ A +FIEQ HVRVGP L D
Sbjct: 121 AETIQDAVKFIEQGHVRVGPNLIND 145
>CGD|CAL0005715 [details] [associations]
symbol:orf19.7488 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0034457 "Mpp10
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030515 "snoRNA binding" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 CGD:CAL0005715 GO:GO:0005622
GO:GO:0019843 EMBL:AACQ01000039 Gene3D:3.10.290.10 eggNOG:COG0522
KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831 RefSeq:XP_718645.1
ProteinModelPortal:Q5AAK1 SMR:Q5AAK1 STRING:Q5AAK1 GeneID:3639726
KEGG:cal:CaO19.7488 Uniprot:Q5AAK1
Length = 183
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 75/145 (51%), Positives = 98/145 (67%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQK 60
MVR LK+HE+KLLKKVDF+ W+ D + ++MR + IQ R+DY YNK+ IR LA K
Sbjct: 1 MVRALKHHEKKLLKKVDFLDWKQDQGHRDTQVMRTYHIQNREDYHKYNKICGDIRKLAHK 60
Query: 61 IKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENC-NKVTASSFCKRRLPVVMYRNKM 119
+ L P DPFR++ LLEKLY MG++ TK + + NKVT SS C+RR+ VVM R KM
Sbjct: 61 LSLLQPTDPFRIKHEQLLLEKLYNMGVLSTKSKISDLENKVTVSSLCRRRIGVVMCRLKM 120
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
+ + A +FIEQ HVRVGP + D
Sbjct: 121 AETISDAVKFIEQGHVRVGPNVITD 145
>UNIPROTKB|Q5AAK1 [details] [associations]
symbol:IMP3 "Likely U3 snoRNP protein" species:237561
"Candida albicans SC5314" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163
Pfam:PF01479 PROSITE:PS50889 SMART:SM00363 CGD:CAL0005715
GO:GO:0005622 GO:GO:0019843 EMBL:AACQ01000039 Gene3D:3.10.290.10
eggNOG:COG0522 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
RefSeq:XP_718645.1 ProteinModelPortal:Q5AAK1 SMR:Q5AAK1
STRING:Q5AAK1 GeneID:3639726 KEGG:cal:CaO19.7488 Uniprot:Q5AAK1
Length = 183
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 75/145 (51%), Positives = 98/145 (67%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQK 60
MVR LK+HE+KLLKKVDF+ W+ D + ++MR + IQ R+DY YNK+ IR LA K
Sbjct: 1 MVRALKHHEKKLLKKVDFLDWKQDQGHRDTQVMRTYHIQNREDYHKYNKICGDIRKLAHK 60
Query: 61 IKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENC-NKVTASSFCKRRLPVVMYRNKM 119
+ L P DPFR++ LLEKLY MG++ TK + + NKVT SS C+RR+ VVM R KM
Sbjct: 61 LSLLQPTDPFRIKHEQLLLEKLYNMGVLSTKSKISDLENKVTVSSLCRRRIGVVMCRLKM 120
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
+ + A +FIEQ HVRVGP + D
Sbjct: 121 AETISDAVKFIEQGHVRVGPNVITD 145
>POMBASE|SPAC19D5.05c [details] [associations]
symbol:imp3 "U3 snoRNP-associated protein Imp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0030515 "snoRNA
binding" evidence=ISO] [GO:0030532 "small nuclear ribonucleoprotein
complex" evidence=ISO] [GO:0032040 "small-subunit processome"
evidence=ISO] InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163
Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363
PomBase:SPAC19D5.05c EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0030515 GO:GO:0019843 GO:GO:0006364
GO:GO:0030532 GO:GO:0032040 GO:GO:0005732 Gene3D:3.10.290.10
eggNOG:COG0522 HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801
PANTHER:PTHR11831 OMA:FIEQGHV PIR:T37965 RefSeq:NP_594903.1
ProteinModelPortal:O13835 SMR:O13835 STRING:O13835
EnsemblFungi:SPAC19D5.05c.1 GeneID:2542514 KEGG:spo:SPAC19D5.05c
OrthoDB:EOG48PQVF NextBio:20803567 Uniprot:O13835
Length = 183
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 68/145 (46%), Positives = 100/145 (68%)
Query: 2 VRKLKYHEQKLLKKVDFISWEADNNLH-EVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQK 60
+R LK+HEQKLL+KVDF++++ D+N H +V +MRR+ I KR++Y YN + R LA +
Sbjct: 1 MRILKHHEQKLLRKVDFLNYKNDDNNHRDVMVMRRYHISKREEYQKYNIICGKFRQLAHR 60
Query: 61 IKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENC-NKVTASSFCKRRLPVVMYRNKM 119
+ LDP DPFR++ LLEKL+ MG++ +K + + NK S+ C+RRLPV+M + +M
Sbjct: 61 LSLLDPTDPFRLQYENLLLEKLFDMGILPSKSKMSDIENKANVSAICRRRLPVIMCKLRM 120
Query: 120 VQQLRLATQFIEQAHVRVGPELEGD 144
Q + AT+ IEQ HVRVGP + D
Sbjct: 121 SQVVSEATRLIEQGHVRVGPHVITD 145
>TAIR|locus:2143196 [details] [associations]
symbol:AT5G15750 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA]
InterPro:IPR001912 InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 EMBL:CP002688 GO:GO:0019843
GO:GO:0004812 GO:GO:0022627 Gene3D:3.10.290.10 eggNOG:COG0522
HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV EMBL:BT025770 EMBL:AK175183 IPI:IPI00517764
RefSeq:NP_568321.1 UniGene:At.31757 ProteinModelPortal:Q683D4
SMR:Q683D4 STRING:Q683D4 PaxDb:Q683D4 PRIDE:Q683D4 DNASU:831431
EnsemblPlants:AT5G15750.1 GeneID:831431 KEGG:ath:AT5G15750
TAIR:At5g15750 InParanoid:Q683D4 PhylomeDB:Q683D4
ProtClustDB:CLSN2689703 ArrayExpress:Q683D4 Genevestigator:Q683D4
Uniprot:Q683D4
Length = 182
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 63/139 (45%), Positives = 92/139 (66%)
Query: 2 VRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQKI 61
+RKLKYHE+KL+KKV+F+ W+ + N E +I R+ + R DY Y+ L R+++ L +
Sbjct: 1 MRKLKYHEKKLIKKVNFLEWKREGNHRENEITYRYHMGSRDDYKKYSGLCRMVQKLTNIM 60
Query: 62 KDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQ 121
K +DP DPFR++ + LLEKLY MG+I T+ L +++ SSFC+RRL V+ K +
Sbjct: 61 KQMDPADPFRIQMTDMLLEKLYNMGVIPTRKSLTLTERLSVSSFCRRRLSTVLVHLKFAE 120
Query: 122 QLRLATQFIEQAHVRVGPE 140
+ A +IEQ HVRVGPE
Sbjct: 121 HHKEAVTYIEQGHVRVGPE 139
>WB|WBGene00016740 [details] [associations]
symbol:C48B6.2 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR002942 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 GO:GO:0005739 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0005840
GO:GO:0040035 GO:GO:0019843 Gene3D:3.10.290.10 eggNOG:COG0522
HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV GeneTree:ENSGT00550000075090 EMBL:FO080896 PIR:T28926
RefSeq:NP_491972.1 ProteinModelPortal:O01513 SMR:O01513
STRING:O01513 PaxDb:O01513 EnsemblMetazoa:C48B6.2.1
EnsemblMetazoa:C48B6.2.2 GeneID:172420 KEGG:cel:CELE_C48B6.2
UCSC:C48B6.2 CTD:172420 WormBase:C48B6.2 InParanoid:O01513
NextBio:875439 Uniprot:O01513
Length = 183
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 66/144 (45%), Positives = 91/144 (63%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQK 60
MVRKLK HEQKLLKK DF+SW+ D + ++R+F ++KR+ Y YN L+ R +A
Sbjct: 1 MVRKLKTHEQKLLKKTDFMSWQVDQQGKQGDMLRKFYVKKREHYALYNTLAAKSREVADL 60
Query: 61 IKDLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKMV 120
IK+L DPFR + + +L K Y GL+ T LE KVT +SF +RRLPVVM M
Sbjct: 61 IKNLSESDPFRSKCTEDMLTKFYAAGLVPTSDTLERIGKVTGASFARRRLPVVMRNIGMC 120
Query: 121 QQLRLATQFIEQAHVRVGPELEGD 144
+ ++ A+ +EQ HVR+G +L D
Sbjct: 121 ESVKTASDLVEQGHVRIGTKLVTD 144
>UNIPROTKB|E1BW88 [details] [associations]
symbol:E1BW88 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR002942 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 GO:GO:0005730 GO:GO:0003723
GO:GO:0006364 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 OMA:FIEQGHV GeneTree:ENSGT00550000075090
EMBL:AADN02018211 EMBL:AADN02018212 IPI:IPI00602146
Ensembl:ENSGALT00000026971 Uniprot:E1BW88
Length = 174
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 67/146 (45%), Positives = 96/146 (65%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEA-DNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQ 59
MVRKLKYHEQKLL++++ +SWEA NL EV+ +RR+ + R+ +R A+
Sbjct: 1 MVRKLKYHEQKLLRRLESVSWEAAPGNLAEVRALRRYRVGARE-----------VRAGAR 49
Query: 60 KIKDLDPKDP-FRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNK 118
++ DL P FR +A LLEKLY +GL+ ++ L C +V+A+SFC+RRLP ++ + +
Sbjct: 50 RLLDLSPASAAFRARCAAALLEKLYALGLVGSRRSLAVCERVSAASFCRRRLPCLLLKLR 109
Query: 119 MVQQLRLATQFIEQAHVRVGPELEGD 144
M Q LR A F+EQ HVRVGPE+ D
Sbjct: 110 MAQNLRHAVTFVEQGHVRVGPEVVTD 135
>ASPGD|ASPL0000000714 [details] [associations]
symbol:AN6171 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0034457 "Mpp10
complex" evidence=IEA] [GO:0030515 "snoRNA binding" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR001912
InterPro:IPR002942 Pfam:PF00163 Pfam:PF01479 PROSITE:PS50889
SMART:SM00363 EMBL:BN001301 GO:GO:0030529 GO:GO:0019843
EMBL:AACD01000105 Gene3D:3.10.290.10 eggNOG:COG0522
HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV OrthoDB:EOG48PQVF RefSeq:XP_663775.1
ProteinModelPortal:Q5AZV9 SMR:Q5AZV9 STRING:Q5AZV9
EnsemblFungi:CADANIAT00006839 GeneID:2870733 KEGG:ani:AN6171.2
Uniprot:Q5AZV9
Length = 188
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 64/150 (42%), Positives = 100/150 (66%)
Query: 1 MVRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQK 60
MVRKLK+HEQKLL+KV+ ++++D+ E +I++R+ +Q DY Y+ + +R LA K
Sbjct: 1 MVRKLKHHEQKLLRKVNLTTYKSDHAHRESQIIQRYYLQNPVDYKKYSAIVGSLRQLAHK 60
Query: 61 IKDLDP-KDPFRVESSAKLLEKLYLMGLIRTKWD----LENCNK-VTASSFCKRRLPVVM 114
+ LDP DP R ++ +++L+KL+ MG+++ + L + VT S+FC+RRL VVM
Sbjct: 61 LSALDPDSDPIRQKTESEVLDKLWRMGILKQSREQGAGLSRIEREVTVSAFCRRRLAVVM 120
Query: 115 YRNKMVQQLRLATQFIEQAHVRVGPELEGD 144
R+ MV+ ++ A FIEQ HVRVG E+ D
Sbjct: 121 ARSGMVENIKTAVTFIEQGHVRVGSEVVTD 150
>DICTYBASE|DDB_G0278983 [details] [associations]
symbol:imp3 "U3 small nucleolar ribonucleoprotein
protein" species:44689 "Dictyostelium discoideum" [GO:0005615
"extracellular space" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0034457 "Mpp10 complex" evidence=ISS] [GO:0006364
"rRNA processing" evidence=ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030515 "snoRNA binding" evidence=ISS]
InterPro:IPR002942 PROSITE:PS50889 SMART:SM00363
dictyBase:DDB_G0278983 GO:GO:0005615 GenomeReviews:CM000152_GR
EMBL:AAFI02000026 GO:GO:0030515 GO:GO:0006364 eggNOG:COG0522
KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831 OMA:FIEQGHV
GO:GO:0034457 RefSeq:XP_641888.1 ProteinModelPortal:Q54XG2
STRING:Q54XG2 PRIDE:Q54XG2 EnsemblProtists:DDB0302412
GeneID:8621814 KEGG:ddi:DDB_G0278983 Uniprot:Q54XG2
Length = 177
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 56/138 (40%), Positives = 84/138 (60%)
Query: 3 RKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQKIK 62
RKLKYHE+KLLKK +F + +N +V+ + RFG++ +++Y Y KL + + ++I
Sbjct: 5 RKLKYHEEKLLKKTNFKHYRRENQ-KDVENIGRFGLKGKEEYAEYTKLVAQYKHVLKEIS 63
Query: 63 DLDPKDPFRVESSAKLLEKLYLMGLIRTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQ 122
DL +DP + + + L EKLY MG+I K E KV ASSFC+RR V++ + K +
Sbjct: 64 DLSDQDPVKQKLLSDLSEKLYNMGVIDLKQPSELV-KVNASSFCRRRAVVMLVKKKFAEH 122
Query: 123 LRLATQFIEQAHVRVGPE 140
L A + HVR+GPE
Sbjct: 123 LTQAFGLLSHGHVRIGPE 140
>GENEDB_PFALCIPARUM|PF14_0584 [details] [associations]
symbol:PF14_0584 "ribosomal protein S4,
putative" species:5833 "Plasmodium falciparum" [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS]
InterPro:IPR002942 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0003723 EMBL:AE014187 GO:GO:0005763 Gene3D:3.10.290.10
HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV RefSeq:XP_001348758.1 ProteinModelPortal:Q8IKM0
EnsemblProtists:PF14_0584:mRNA GeneID:812166 KEGG:pfa:PF14_0584
EuPathDB:PlasmoDB:PF3D7_1461200 ProtClustDB:CLSZ2733873
Uniprot:Q8IKM0
Length = 159
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 2 VRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQKI 61
+RKLKYHEQKLLKKV+F W+ NN+ EVK++R++ IQ R+DYT YNK+ I L K+
Sbjct: 1 MRKLKYHEQKLLKKVNFYDWKRTNNVREVKVLRKYVIQNREDYTKYNKICGYITKLVSKL 60
Query: 62 KDLDPKDPF 70
+ L D F
Sbjct: 61 RLLPENDEF 69
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/111 (27%), Positives = 57/111 (51%)
Query: 28 HEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
HE K++++ + ++ L + + Q +D + KL+ KL L+
Sbjct: 7 HEQKLLKKVNFYDWKRTNNVREVKVLRKYVIQNREDYTKYNKI-CGYITKLVSKLRLLP- 64
Query: 88 IRTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRVG 138
+ C K+T SSFC+RRL V+++R K VQ ++LA +I+ ++R+G
Sbjct: 65 --ENDEFPECEKITVSSFCRRRLAVLLFRLKFVQTIKLAITYIQHGNIRIG 113
>UNIPROTKB|Q8IKM0 [details] [associations]
symbol:PF14_0584 "Mitochondrial ribosomal protein S4/S9,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS]
InterPro:IPR002942 Pfam:PF01479 PROSITE:PS50889 SMART:SM00363
GO:GO:0003723 EMBL:AE014187 GO:GO:0005763 Gene3D:3.10.290.10
HOGENOM:HOG000213883 KO:K14560 InterPro:IPR022801 PANTHER:PTHR11831
OMA:FIEQGHV RefSeq:XP_001348758.1 ProteinModelPortal:Q8IKM0
EnsemblProtists:PF14_0584:mRNA GeneID:812166 KEGG:pfa:PF14_0584
EuPathDB:PlasmoDB:PF3D7_1461200 ProtClustDB:CLSZ2733873
Uniprot:Q8IKM0
Length = 159
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 2 VRKLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQKI 61
+RKLKYHEQKLLKKV+F W+ NN+ EVK++R++ IQ R+DYT YNK+ I L K+
Sbjct: 1 MRKLKYHEQKLLKKVNFYDWKRTNNVREVKVLRKYVIQNREDYTKYNKICGYITKLVSKL 60
Query: 62 KDLDPKDPF 70
+ L D F
Sbjct: 61 RLLPENDEF 69
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/111 (27%), Positives = 57/111 (51%)
Query: 28 HEVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
HE K++++ + ++ L + + Q +D + KL+ KL L+
Sbjct: 7 HEQKLLKKVNFYDWKRTNNVREVKVLRKYVIQNREDYTKYNKI-CGYITKLVSKLRLLP- 64
Query: 88 IRTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRVG 138
+ C K+T SSFC+RRL V+++R K VQ ++LA +I+ ++R+G
Sbjct: 65 --ENDEFPECEKITVSSFCRRRLAVLLFRLKFVQTIKLAITYIQHGNIRIG 113
>TAIR|locus:2178082 [details] [associations]
symbol:AT5G39850 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005829
GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015935
EMBL:AB010077 Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525
ProtClustDB:PLN00189 TIGRFAMs:TIGR01018 EMBL:BT024915 EMBL:AY088109
IPI:IPI00526550 RefSeq:NP_198801.1 UniGene:At.43632
ProteinModelPortal:Q9FLF0 SMR:Q9FLF0 STRING:Q9FLF0 PaxDb:Q9FLF0
PRIDE:Q9FLF0 EnsemblPlants:AT5G39850.1 GeneID:833981
KEGG:ath:AT5G39850 TAIR:At5g39850 InParanoid:Q9FLF0 OMA:RTKRELW
PhylomeDB:Q9FLF0 Genevestigator:Q9FLF0 GermOnline:AT5G39850
Uniprot:Q9FLF0
Length = 197
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 36/115 (31%), Positives = 66/115 (57%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + LSR IR A+++ LD K+P R+ LL ++ GL
Sbjct: 29 ELKLVGEYGLRCKRELWRVQYTLSR-IRNAARELLTLDEKNPRRIFEGEALLRRMNRYGL 87
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRVGPEL 141
+ T+ L+ +T +F +RRL +++++ M + + A I Q H+RVG +L
Sbjct: 88 LDETQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHIRVGRQL 142
>DICTYBASE|DDB_G0289877 [details] [associations]
symbol:rps9 "40S ribosomal protein S9" species:44689
"Dictyostelium discoideum" [GO:0031982 "vesicle" evidence=IDA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005710 InterPro:IPR018079
Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632 PROSITE:PS50889
SMART:SM00363 dictyBase:DDB_G0289877 GO:GO:0006412
GenomeReviews:CM000154_GR GO:GO:0003735 EMBL:AAFI02000149
GO:GO:0031982 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
TIGRFAMs:TIGR01018 OMA:QDFMERR EMBL:X06636 EMBL:X15384 PIR:S01093
RefSeq:XP_635999.1 ProteinModelPortal:P14132 STRING:P14132
PRIDE:P14132 EnsemblProtists:DDB0191528 GeneID:8627414
KEGG:ddi:DDB_G0289877 ProtClustDB:PTZ00155 Uniprot:P14132
Length = 185
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 31/114 (27%), Positives = 62/114 (54%)
Query: 29 EVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGLI 88
E+K++ FG++ + + IR A+++ LD KDP R+ + LL +L+ +G++
Sbjct: 24 ELKVVGEFGLKNKNEVWRVQYALAKIRKAARELLVLDEKDPKRIFEGSALLRRLHKLGVM 83
Query: 89 R-TKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRVGPEL 141
+K L+ + F +RRL ++++N + + + A I+ H+RVG +L
Sbjct: 84 EESKNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQL 137
>TAIR|locus:2150976 [details] [associations]
symbol:AT5G15200 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0009506
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0009507 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL353993 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
EMBL:BT010847 EMBL:BT011315 EMBL:AK228437 IPI:IPI00534338
PIR:T49955 RefSeq:NP_197024.1 UniGene:At.1767
ProteinModelPortal:Q9LXG1 SMR:Q9LXG1 STRING:Q9LXG1 PaxDb:Q9LXG1
PRIDE:Q9LXG1 EnsemblPlants:AT5G15200.1 GeneID:831372
KEGG:ath:AT5G15200 TAIR:At5g15200 HOGENOM:HOG000194525
InParanoid:Q9LXG1 OMA:QTIVYRK PhylomeDB:Q9LXG1 ProtClustDB:PLN00189
Genevestigator:Q9LXG1 GermOnline:AT5G15200 TIGRFAMs:TIGR01018
Uniprot:Q9LXG1
Length = 198
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/115 (29%), Positives = 64/115 (55%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + LSR IR A+ + LD K P R+ LL ++ GL
Sbjct: 29 ELKLVGEYGLRNKRELWRVQYSLSR-IRNAARDLLTLDEKSPRRIFEGEALLRRMNRYGL 87
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRVGPEL 141
+ ++ L+ +T +F +RRL +++++ M + + + I Q H+RVG +L
Sbjct: 88 LDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIRVGKQL 142
>ASPGD|ASPL0000071451 [details] [associations]
symbol:AN4803 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003735
EMBL:BN001303 GO:GO:0019843 EMBL:AACD01000081 GO:GO:0015935
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 OrthoDB:EOG4Q886R RefSeq:XP_662407.1
ProteinModelPortal:Q5B3S7 STRING:Q5B3S7
EnsemblFungi:CADANIAT00005618 GeneID:2872602 KEGG:ani:AN4803.2
Uniprot:Q5B3S7
Length = 193
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 33/115 (28%), Positives = 64/115 (55%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+KI+ +G++ KR+ + LS+ IR A+++ LD KDP R+ L+ +L +G+
Sbjct: 27 ELKIVGEYGLRNKREVWRVQFTLSK-IRRAARELLTLDEKDPKRLFEGNALIRRLVRIGV 85
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRVGPEL 141
+ ++ L+ + F +RRL +Y+ + + + A I+Q H+RVG ++
Sbjct: 86 LDESRMKLDYVLALRVEDFLERRLQTCVYKLGLAKSIHHARVLIKQRHIRVGKQI 140
>WB|WBGene00004478 [details] [associations]
symbol:rps-9 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0032502
"developmental process" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0010171 GO:GO:0000003
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:Z69302 PIR:T22034
RefSeq:NP_496384.1 ProteinModelPortal:Q20228 SMR:Q20228
DIP:DIP-25908N MINT:MINT-1122534 STRING:Q20228 PaxDb:Q20228
PRIDE:Q20228 EnsemblMetazoa:F40F8.10.1 EnsemblMetazoa:F40F8.10.2
GeneID:174699 KEGG:cel:CELE_F40F8.10 UCSC:F40F8.10.1 CTD:174699
WormBase:F40F8.10 InParanoid:Q20228 NextBio:885126 Uniprot:Q20228
Length = 189
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 36/136 (26%), Positives = 71/136 (52%)
Query: 4 KLKYHEQKLLKKVDFISWEADNNLHEVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIK 62
+LK + K+ K +E + E+K++ FG++ KR+ + L++ +R A+++
Sbjct: 3 RLKTVQSKVTKSPRR-PFEKERLDQELKLIGTFGLKNKREVWRVKYTLAK-VRKAARELL 60
Query: 63 DLDPKDPFRVESSAKLLEKLYLMGLI-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQ 121
L+ KDP R+ LL +L +G++ TK L+ + F +RRL +++ + +
Sbjct: 61 TLEDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAK 120
Query: 122 QLRLATQFIEQAHVRV 137
+ A I+Q H+RV
Sbjct: 121 SIHHARILIKQHHIRV 136
>SGD|S000000393 [details] [associations]
symbol:RPS9B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0045903 "positive regulation of translational fidelity"
evidence=IMP] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 SGD:S000000393
GO:GO:0005730 GO:GO:0006412 EMBL:BK006936 GO:GO:0003735
RefSeq:NP_009753.3 GeneID:852493 KEGG:sce:YBR194W GO:GO:0019843
GO:GO:0030686 GO:GO:0032040 GO:GO:0045903 GO:GO:0000462
GO:GO:0022627 EMBL:U02073 Gene3D:3.10.290.10 eggNOG:COG0522
InterPro:IPR022801 PANTHER:PTHR11831 RefSeq:NP_009748.3
GeneID:852487 KEGG:sce:YBR189W KO:K02997 HOGENOM:HOG000194525
OMA:QTIVYRK TIGRFAMs:TIGR01018 OrthoDB:EOG4Q886R
GeneTree:ENSGT00550000074829 EMBL:M88650 EMBL:Z36058 PIR:S31287
ProteinModelPortal:P05755 SMR:P05755 IntAct:P05755
MINT:MINT-2786155 STRING:P05755 PaxDb:P05755 PeptideAtlas:P05755
EnsemblFungi:YBR189W NextBio:971471 Genevestigator:P05755
GermOnline:YBR189W Uniprot:P05755
Length = 195
Score = 118 (46.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K+ FG++ KR+ Y +LS+ IR A+ + D KDP R+ L+ +L +G+
Sbjct: 27 ELKLAGEFGLKNKREIYRISFQLSK-IRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGV 85
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRVGPEL 141
+ K L+ + F +RRL +Y+ + + + A I Q H+ VG ++
Sbjct: 86 LSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQI 140
>POMBASE|SPAC24H6.07 [details] [associations]
symbol:rps901 "40S ribosomal protein S9" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 PomBase:SPAC24H6.07 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 TIGRFAMs:TIGR01018
EMBL:AB027929 EMBL:AB011008 PIR:S62409 PIR:T43321
RefSeq:NP_592945.1 ProteinModelPortal:Q09757 STRING:Q09757
PRIDE:Q09757 EnsemblFungi:SPAC24H6.07.1 GeneID:2542629
KEGG:spo:SPAC24H6.07 OMA:QDFMERR OrthoDB:EOG4Q886R NextBio:20803678
Uniprot:Q09757
Length = 191
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 29/115 (25%), Positives = 61/115 (53%)
Query: 29 EVKIMRRFGIQKRQD-YTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K+ +G++ + + + LS+ IR A+++ LD KDP R+ ++ +L +G+
Sbjct: 27 ELKLAGEYGLRNKHEIWRVALTLSK-IRRAARELLTLDEKDPKRLFEGNAIIRRLVRLGI 85
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRVGPEL 141
+ T+ L+ + F +RRL +++ + + + A I Q H+RVG ++
Sbjct: 86 LDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQI 140
>SGD|S000006002 [details] [associations]
symbol:RPS9A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA;IMP;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0002181 "cytoplasmic
translation" evidence=IC] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 SGD:S000006002
GO:GO:0005730 EMBL:BK006949 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 EMBL:U41849 GO:GO:0030686 GO:GO:0032040 GO:GO:0000462
PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30
PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C
PDBsum:3U5G Gene3D:3.10.290.10 InterPro:IPR022801 PANTHER:PTHR11831
KO:K02997 PDB:1K5X PDBsum:1K5X HOGENOM:HOG000194525
TIGRFAMs:TIGR01018 OMA:RTKRELW OrthoDB:EOG4Q886R EMBL:D00724
PIR:S16822 RefSeq:NP_015244.1 ProteinModelPortal:O13516 SMR:O13516
IntAct:O13516 MINT:MINT-2786178 STRING:O13516 PeptideAtlas:O13516
PRIDE:O13516 EnsemblFungi:YPL081W GeneID:856024 KEGG:sce:YPL081W
GeneTree:ENSGT00550000074829 EvolutionaryTrace:O13516
NextBio:980938 Genevestigator:O13516 GermOnline:YPL081W
Uniprot:O13516
Length = 197
Score = 115 (45.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 32/115 (27%), Positives = 59/115 (51%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K+ FG++ K++ Y +LS+ IR A+ + D KDP R+ L+ +L +G+
Sbjct: 27 ELKLAGEFGLKNKKEIYRISFQLSK-IRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGV 85
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRVGPEL 141
+ K L+ + F +RRL +Y+ + + + A I Q H+ VG ++
Sbjct: 86 LSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQI 140
>POMBASE|SPBC29A3.12 [details] [associations]
symbol:rps902 "40S ribosomal protein S9 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 PomBase:SPBC29A3.12 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 EMBL:AB027929 OrthoDB:EOG4Q886R EMBL:AB029515
PIR:T40083 PIR:T43516 RefSeq:NP_595840.1 ProteinModelPortal:O59675
STRING:O59675 PRIDE:O59675 EnsemblFungi:SPBC29A3.12.1
GeneID:2540367 KEGG:spo:SPBC29A3.12 NextBio:20801495 Uniprot:O59675
Length = 192
Score = 113 (44.8 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 28/115 (24%), Positives = 61/115 (53%)
Query: 29 EVKIMRRFGIQKRQD-YTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K+ +G++ + + + LS+ IR A+++ LD KDP R+ ++ +L +G+
Sbjct: 27 ELKLAGEYGLRNKHEIWRVALTLSK-IRRAARELLTLDEKDPKRLFEGNAIIRRLVRLGI 85
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRVGPEL 141
+ ++ L+ + F +RRL +++ + + + A I Q H+RVG ++
Sbjct: 86 LDESRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQI 140
>UNIPROTKB|A6QLG5 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9913 "Bos
taurus" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:BC147956 EMBL:BC148016
IPI:IPI00694565 RefSeq:NP_001094622.1 UniGene:Bt.52718
ProteinModelPortal:A6QLG5 SMR:A6QLG5 STRING:A6QLG5 PRIDE:A6QLG5
Ensembl:ENSBTAT00000008502 GeneID:533892 KEGG:bta:533892 CTD:6203
HOVERGEN:HBG001135 InParanoid:A6QLG5 OrthoDB:EOG4MW876
NextBio:20876183 Uniprot:A6QLG5
Length = 194
Score = 112 (44.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/111 (27%), Positives = 59/111 (53%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G+
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPRRLFEGNALLRRLVRIGV 86
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRV 137
+ K L+ + F +RRL +++ + + + A I Q H+RV
Sbjct: 87 LDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
>UNIPROTKB|E2R8R8 [details] [associations]
symbol:RPS9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 EMBL:AAEX03000741
RefSeq:XP_533590.2 ProteinModelPortal:E2R8R8 SMR:E2R8R8
PRIDE:E2R8R8 Ensembl:ENSCAFT00000004179 GeneID:476387
KEGG:cfa:476387 NextBio:20852054 Uniprot:E2R8R8
Length = 194
Score = 112 (44.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/111 (27%), Positives = 59/111 (53%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G+
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPRRLFEGNALLRRLVRIGV 86
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRV 137
+ K L+ + F +RRL +++ + + + A I Q H+RV
Sbjct: 87 LDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
>UNIPROTKB|P46781 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IMP] [GO:0006412 "translation"
evidence=IC;IMP;TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0045182 "translation
regulator activity" evidence=IMP] [GO:0005840 "ribosome"
evidence=NAS] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0006417 "regulation of translation" evidence=IMP]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 Reactome:REACT_116125 GO:GO:0005730
GO:GO:0000184 GO:GO:0006413 GO:GO:0008284 GO:GO:0045182
GO:GO:0003735 GO:GO:0019843 EMBL:CH471135 GO:GO:0006415
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0019083 Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 EMBL:CU151838 EMBL:CU457734
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018 CTD:6203
HOVERGEN:HBG001135 OrthoDB:EOG4MW876 ChiTaRS:RPS9 EMBL:U14971
EMBL:AB061839 EMBL:BC000802 EMBL:BC007410 EMBL:BC007434
EMBL:BC007857 EMBL:BC068055 EMBL:BC071940 EMBL:BC096756
EMBL:AB007150 IPI:IPI00221088 PIR:S55917 RefSeq:NP_001004.2
UniGene:Hs.467284 UniGene:Hs.546288 ProteinModelPortal:P46781
SMR:P46781 IntAct:P46781 MINT:MINT-5001013 STRING:P46781
PhosphoSite:P46781 DMDM:20178311 PaxDb:P46781 PeptideAtlas:P46781
PRIDE:P46781 DNASU:6203 Ensembl:ENST00000302907
Ensembl:ENST00000391752 Ensembl:ENST00000391753
Ensembl:ENST00000573353 Ensembl:ENST00000573511
Ensembl:ENST00000574910 Ensembl:ENST00000575726
Ensembl:ENST00000575746 Ensembl:ENST00000576887 GeneID:6203
KEGG:hsa:6203 UCSC:uc002qdx.3 GeneCards:GC19P054828 HGNC:HGNC:10442
HPA:HPA048746 MIM:603631 neXtProt:NX_P46781 PharmGKB:PA34857
InParanoid:P46781 PhylomeDB:P46781 GenomeRNAi:6203 NextBio:24091
ArrayExpress:P46781 Bgee:P46781 CleanEx:HS_RPS9
Genevestigator:P46781 GermOnline:ENSG00000170889 Uniprot:P46781
Length = 194
Score = 112 (44.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/111 (27%), Positives = 59/111 (53%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G+
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPRRLFEGNALLRRLVRIGV 86
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRV 137
+ K L+ + F +RRL +++ + + + A I Q H+RV
Sbjct: 87 LDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
>UNIPROTKB|A9L913 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9555 "Papio
anubis" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 GO:GO:0006412 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 TIGRFAMs:TIGR01018 CTD:6203
HOVERGEN:HBG001135 EMBL:DP000506 RefSeq:NP_001162349.1
UniGene:Pan.54 ProteinModelPortal:A9L913 SMR:A9L913 PRIDE:A9L913
GeneID:100137341 Uniprot:A9L913
Length = 194
Score = 112 (44.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/111 (27%), Positives = 59/111 (53%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G+
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPRRLFEGNALLRRLVRIGV 86
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRV 137
+ K L+ + F +RRL +++ + + + A I Q H+RV
Sbjct: 87 LDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
>MGI|MGI:1924096 [details] [associations]
symbol:Rps9 "ribosomal protein S9" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0006417
"regulation of translation" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=ISO]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 MGI:MGI:1924096 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0030529 GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 HOVERGEN:HBG001135
OrthoDB:EOG4MW876 ChiTaRS:RPS9 EMBL:AK050591 EMBL:AK081889
EMBL:AK150800 EMBL:AK150988 EMBL:AK151029 EMBL:AK151621
EMBL:BC031746 IPI:IPI00420726 RefSeq:NP_084043.1 UniGene:Mm.13944
ProteinModelPortal:Q6ZWN5 SMR:Q6ZWN5 STRING:Q6ZWN5
PhosphoSite:Q6ZWN5 PaxDb:Q6ZWN5 PRIDE:Q6ZWN5
Ensembl:ENSMUST00000006496 Ensembl:ENSMUST00000108625 GeneID:76846
KEGG:mmu:76846 UCSC:uc009ewa.1 InParanoid:Q6ZWN5 NextBio:345919
Bgee:Q6ZWN5 CleanEx:MM_RPS9 Genevestigator:Q6ZWN5
GermOnline:ENSMUSG00000006333 Uniprot:Q6ZWN5
Length = 194
Score = 112 (44.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/111 (27%), Positives = 59/111 (53%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G+
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPRRLFEGNALLRRLVRIGV 86
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRV 137
+ K L+ + F +RRL +++ + + + A I Q H+RV
Sbjct: 87 LDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
>RGD|619889 [details] [associations]
symbol:Rps9 "ribosomal protein S9" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006412 "translation" evidence=IEA;ISO]
[GO:0006417 "regulation of translation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO;ISS] [GO:0045182 "translation regulator activity"
evidence=ISO] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 RGD:619889
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0022627
Gene3D:3.10.290.10 eggNOG:COG0522 InterPro:IPR022801
PANTHER:PTHR11831 KO:K02997 HOGENOM:HOG000194525 OMA:QTIVYRK
TIGRFAMs:TIGR01018 GeneTree:ENSGT00550000074829 CTD:6203
HOVERGEN:HBG001135 OrthoDB:EOG4MW876 EMBL:X66370 EMBL:BC060560
IPI:IPI00421626 PIR:JN0587 RefSeq:NP_112370.2 RefSeq:XP_003748763.1
UniGene:Rn.109735 UniGene:Rn.225908 ProteinModelPortal:P29314
SMR:P29314 IntAct:P29314 STRING:P29314 PRIDE:P29314
Ensembl:ENSRNOT00000015234 GeneID:100909466 GeneID:81772
KEGG:rno:100909466 KEGG:rno:81772 UCSC:RGD:619889 InParanoid:P29314
NextBio:615589 ArrayExpress:P29314 Genevestigator:P29314
GermOnline:ENSRNOG00000011355 Uniprot:P29314
Length = 194
Score = 112 (44.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 31/111 (27%), Positives = 59/111 (53%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G+
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPRRLFEGNALLRRLVRIGV 86
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRV 137
+ K L+ + F +RRL +++ + + + A I Q H+RV
Sbjct: 87 LDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
>UNIPROTKB|I3LEX0 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9823 "Sus
scrofa" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 GO:GO:0005730
GO:GO:0006412 GO:GO:0008284 GO:GO:0045182 GO:GO:0003735
GO:GO:0019843 GO:GO:0022627 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 EMBL:FP476135
Ensembl:ENSSSCT00000027911 Uniprot:I3LEX0
Length = 193
Score = 110 (43.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/109 (27%), Positives = 58/109 (53%)
Query: 31 KIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGLI- 88
+++R +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G++
Sbjct: 29 RLVREYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLD 87
Query: 89 RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRV 137
K L+ + F +RRL +++ + + + A I Q H+RV
Sbjct: 88 EGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 136
>ZFIN|ZDB-GENE-010724-15 [details] [associations]
symbol:rps9 "ribosomal protein S9" species:7955
"Danio rerio" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001912 InterPro:IPR002942 InterPro:IPR005710
InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479 PROSITE:PS00632
PROSITE:PS50889 SMART:SM00363 ZFIN:ZDB-GENE-010724-15 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
eggNOG:COG0522 InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997
EMBL:BX511250 HOGENOM:HOG000194525 OMA:QTIVYRK TIGRFAMs:TIGR01018
GeneTree:ENSGT00550000074829 CTD:6203 HOVERGEN:HBG001135
EMBL:CU693477 EMBL:BC059492 EMBL:BC062833 IPI:IPI00487430
RefSeq:NP_957146.1 UniGene:Dr.75119 STRING:Q6P5M3
Ensembl:ENSDART00000129698 GeneID:114420 KEGG:dre:114420
InParanoid:Q6P5M3 NextBio:20796909 Uniprot:Q6P5M3
Length = 194
Score = 110 (43.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/111 (27%), Positives = 59/111 (53%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E++++ +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G+
Sbjct: 28 ELRLIGEYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPKRLFEGNALLRRLVRIGV 86
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRV 137
+ K L+ + F +RRL +++ + + + A I Q H+RV
Sbjct: 87 LDEGKMKLDYILGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
>UNIPROTKB|C9JM19 [details] [associations]
symbol:RPS9 "Ribosomal protein S9, isoform CRA_e"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CH471135 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 EMBL:AC010492 EMBL:AC012314 HOGENOM:HOG000194525
TIGRFAMs:TIGR01018 ChiTaRS:RPS9 UniGene:Hs.467284 UniGene:Hs.546288
HGNC:HGNC:10442 IPI:IPI00925580 SMR:C9JM19 STRING:C9JM19
Ensembl:ENST00000441429 UCSC:uc002qeb.3 Uniprot:C9JM19
Length = 156
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/110 (27%), Positives = 58/110 (52%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G+
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPRRLFEGNALLRRLVRIGV 86
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVR 136
+ K L+ + F +RRL +++ + + + A I Q H+R
Sbjct: 87 LDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136
>UNIPROTKB|B5MCT8 [details] [associations]
symbol:RPS9 "40S ribosomal protein S9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CH471135 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 EMBL:AC010492 EMBL:AC012314 HOGENOM:HOG000194525
TIGRFAMs:TIGR01018 HOVERGEN:HBG001135 ChiTaRS:RPS9
UniGene:Hs.467284 UniGene:Hs.546288 HGNC:HGNC:10442 IPI:IPI00879238
SMR:B5MCT8 STRING:B5MCT8 Ensembl:ENST00000402367
Ensembl:ENST00000436445 Ensembl:ENST00000445961 Uniprot:B5MCT8
Length = 139
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/109 (26%), Positives = 57/109 (52%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G+
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPRRLFEGNALLRRLVRIGV 86
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHV 135
+ K L+ + F +RRL +++ + + + A I Q H+
Sbjct: 87 LDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 135
>RGD|2320851 [details] [associations]
symbol:LOC100364509 "ribosomal protein S9-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 RGD:2320851 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10 InterPro:IPR022801
PANTHER:PTHR11831 TIGRFAMs:TIGR01018 EMBL:AC126217 IPI:IPI00391036
ProteinModelPortal:D3ZF87 SMR:D3ZF87 PRIDE:D3ZF87
Ensembl:ENSRNOT00000035413 ArrayExpress:D3ZF87 Uniprot:D3ZF87
Length = 139
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/109 (26%), Positives = 57/109 (52%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+K++ +G++ KR+ + L++ IR A+++ LD KDP R+ LL +L +G+
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAK-IRKAARELLTLDEKDPRRLFEGNALLRRLVRIGV 86
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHV 135
+ K L+ + F +RRL +++ + + + A I Q H+
Sbjct: 87 LDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 135
>FB|FBgn0010408 [details] [associations]
symbol:RpS9 "Ribosomal protein S9" species:7227 "Drosophila
melanogaster" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] InterPro:IPR001912 InterPro:IPR002942
InterPro:IPR005710 InterPro:IPR018079 Pfam:PF00163 Pfam:PF01479
PROSITE:PS00632 PROSITE:PS50889 SMART:SM00363 EMBL:AE014296
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
GO:GO:0000022 GO:GO:0015935 Gene3D:3.10.290.10 eggNOG:COG0522
InterPro:IPR022801 PANTHER:PTHR11831 KO:K02997 OMA:QTIVYRK
TIGRFAMs:TIGR01018 GeneTree:ENSGT00550000074829 CTD:6203
EMBL:X69677 EMBL:AY231798 RefSeq:NP_524004.2 RefSeq:NP_729506.1
UniGene:Dm.6943 ProteinModelPortal:P55935 SMR:P55935 IntAct:P55935
STRING:P55935 PaxDb:P55935 PRIDE:P55935 EnsemblMetazoa:FBtr0076423
EnsemblMetazoa:FBtr0076425 GeneID:39108 KEGG:dme:Dmel_CG3395
FlyBase:FBgn0010408 InParanoid:P55935 OrthoDB:EOG4N2Z52
PhylomeDB:P55935 ChiTaRS:RPS9 GenomeRNAi:39108 NextBio:811958
Bgee:P55935 GermOnline:CG3395 Uniprot:P55935
Length = 195
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/111 (27%), Positives = 59/111 (53%)
Query: 29 EVKIMRRFGIQ-KRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLYLMGL 87
E+KI+ +G++ KR+ + L++ IR A+++ LD KD R+ LL +L +G+
Sbjct: 29 ELKIIGEYGLRNKREVWRVKYALAK-IRKAARELLTLDEKDEKRLFQGNALLRRLVRIGV 87
Query: 88 I-RTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRV 137
+ ++ L+ + F +RRL +++ + + + A I Q H+RV
Sbjct: 88 LDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 138
>RGD|1566136 [details] [associations]
symbol:RGD1566136 "similar to 40S ribosomal protein S9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR001912
InterPro:IPR002942 InterPro:IPR005710 Pfam:PF00163 Pfam:PF01479
PROSITE:PS50889 SMART:SM00363 RGD:1566136 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015935 Gene3D:3.10.290.10
InterPro:IPR022801 PANTHER:PTHR11831 TIGRFAMs:TIGR01018 OMA:QDFMERR
GeneTree:ENSGT00550000074829 OrthoDB:EOG4MW876 IPI:IPI00368950
RefSeq:XP_001056883.1 RefSeq:XP_213106.1 PRIDE:D3ZV50
Ensembl:ENSRNOT00000060001 GeneID:300278 KEGG:rno:300278 CTD:300278
NextBio:646699 Uniprot:D3ZV50
Length = 194
Score = 105 (42.0 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 28/110 (25%), Positives = 54/110 (49%)
Query: 29 EVKIMRRFGIQKRQDYTTYNKLSRLIRTLAQKIKDLDPKDPFRVESSAKLLEKLY-LMGL 87
E+K++ +G++ + + IR A+++ LD KDP R+ LL +L ++ L
Sbjct: 28 ELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVL 87
Query: 88 IRTKWDLENCNKVTASSFCKRRLPVVMYRNKMVQQLRLATQFIEQAHVRV 137
K L+ + F +RRL +++ ++ + + A I Q H+RV
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRV 137
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 149 149 0.00078 104 3 11 22 0.43 31
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 42
No. of states in DFA: 592 (63 KB)
Total size of DFA: 146 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.66u 0.11s 15.77t Elapsed: 00:00:01
Total cpu time: 15.67u 0.11s 15.78t Elapsed: 00:00:01
Start: Thu Aug 15 15:39:32 2013 End: Thu Aug 15 15:39:33 2013