Query psy13914
Match_columns 87
No_of_seqs 57 out of 59
Neff 3.0
Searched_HMMs 29240
Date Fri Aug 16 23:42:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13914.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13914hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r51_A Vacuolar protein sortin 99.9 5.8E-25 2E-29 171.9 9.2 86 2-87 198-293 (340)
2 2fau_A Vacuolar protein sortin 99.9 4.3E-24 1.5E-28 167.3 7.5 78 2-79 198-277 (341)
3 3ssb_I IMPI alpha, inducible m 55.4 7.7 0.00026 20.8 2.0 14 20-33 4-17 (32)
4 1ccv_A AMCI, chymotrypsin inhi 45.2 11 0.00039 21.4 1.8 16 18-33 31-46 (56)
5 2p3f_N Anti-coagulant protein 34.2 14 0.0005 22.7 1.1 13 21-33 47-59 (78)
6 1wii_A Hypothetical UPF0222 pr 29.1 27 0.00091 22.4 1.7 22 56-78 18-39 (85)
7 2h9e_C Anti-coagulant protein 27.2 20 0.0007 22.2 0.9 17 17-33 44-60 (84)
8 1xe1_A Hypothetical protein PF 25.8 24 0.00084 23.9 1.1 39 8-47 73-111 (116)
9 3e07_A Protein spaetzle; cysti 25.1 37 0.0013 22.8 2.0 12 15-26 39-50 (114)
10 1ata_A Ascaris trypsin inhibit 18.8 44 0.0015 19.6 1.2 14 20-33 34-50 (62)
No 1
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=99.91 E-value=5.8e-25 Score=171.91 Aligned_cols=86 Identities=21% Similarity=0.327 Sum_probs=81.3
Q ss_pred eeeecCCCceeEEEEEEEEeeeeeCCceeecccceeeEEEeeCcccCCCccCeEEEeeeeeccCccC--ccceEEEEEe-
Q psy13914 2 VIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLI--TSNFKIGERL- 78 (87)
Q Consensus 2 ~ve~s~~pIkSIelQLvRVEt~~~~eg~~reaTEIQniQIadGdVcr~l~IPiymvfPRlftCPt~~--t~~FkveFev- 78 (87)
.++.|+.+||+||+||+|+||++|+.++++|+++||++||+||+++||..|||+|.+|++++|||+. ++.|||+|+|
T Consensus 198 ~f~~s~i~Ik~iel~LiR~Et~~~~~~~~~e~~~i~k~eImdG~p~rge~IPirl~Lp~~~l~PT~~~~~~~fsV~Y~Ln 277 (340)
T 2r51_A 198 YFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYELTPTMRDINKKFSVRYYLN 277 (340)
T ss_dssp EEEEECSCEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEESCCCTTCEEEEEEEGGGSCCCCCEEEETTTEEEEEEEE
T ss_pred EEEEeeceeEEEEEEEEEEEEEecCCCeeEEEEEEEEEEEecCCccCCCEEEEEEECCCCCCCCCccccCCeEEEEEEEE
Confidence 4678999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred -------ceeeeccCC
Q psy13914 79 -------DHYTTKNLK 87 (87)
Q Consensus 79 -------~~liteNfp 87 (87)
++.+++|||
T Consensus 278 lvl~~e~~~~~~kq~p 293 (340)
T 2r51_A 278 LVLIDEEERRYFKQQE 293 (340)
T ss_dssp EEEEETTCCEEEEEEE
T ss_pred EEEEeCCCcEEEEEee
Confidence 577777765
No 2
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=99.90 E-value=4.3e-24 Score=167.26 Aligned_cols=78 Identities=23% Similarity=0.371 Sum_probs=69.8
Q ss_pred eeeecCCCceeEEEEEEEEeeeeeCCceeecccceeeEEEeeCcccCCCccCeEEEeeeeeccCccC--ccceEEEEEec
Q psy13914 2 VIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLI--TSNFKIGERLD 79 (87)
Q Consensus 2 ~ve~s~~pIkSIelQLvRVEt~~~~eg~~reaTEIQniQIadGdVcr~l~IPiymvfPRlftCPt~~--t~~FkveFev~ 79 (87)
.++.|+.+||+||+||+|+||++|+.++.+|+++||++||+||++|||..|||+|.+|++++|||+. +++|||+|+++
T Consensus 198 ~f~~s~i~Ik~iel~LiR~Et~~~~~~~~~e~~~i~k~eImDG~p~rge~IPirl~Lp~~~l~PT~~~~~~~fsV~Y~Ln 277 (341)
T 2fau_A 198 YFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLN 277 (341)
T ss_dssp EEEEECSCEEEEEEEEEEEEEESCGGGCEEEEEEEEEEECCCC------CEEEEEESTTTCCCCCEEEEETTEEEEEEEE
T ss_pred EEEEeccceEEEEEEEEEEEEEcCCCCeeeEEEEEEEEEEeCCCccCCCEEEEEEEcCCCCCCCcchhcCCeEEEEEEEE
Confidence 4678999999999999999999999999999999999999999999999999999999999999999 99999999995
No 3
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=55.41 E-value=7.7 Score=20.84 Aligned_cols=14 Identities=43% Similarity=1.125 Sum_probs=12.1
Q ss_pred EeeeeeCCceeecc
Q psy13914 20 VETCGCAEGYSRDA 33 (87)
Q Consensus 20 VEt~~~~eg~~rea 33 (87)
+..|-|.+||+||.
T Consensus 4 ~~GC~C~~G~vrn~ 17 (32)
T 3ssb_I 4 NDKCYCEDGYARDV 17 (32)
T ss_dssp EEEEEECTTEEECT
T ss_pred CCCCCcCCCcEECC
Confidence 56789999999986
No 4
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=45.20 E-value=11 Score=21.36 Aligned_cols=16 Identities=31% Similarity=0.686 Sum_probs=13.7
Q ss_pred EEEeeeeeCCceeecc
Q psy13914 18 VRVETCGCAEGYSRDA 33 (87)
Q Consensus 18 vRVEt~~~~eg~~rea 33 (87)
.-++.|.|.+||+++.
T Consensus 31 ~C~~GC~C~~G~v~~~ 46 (56)
T 1ccv_A 31 QCRIGCQCQEGFLRNG 46 (56)
T ss_dssp SCEEEEEECTTCEEET
T ss_pred cCCCCCcCCCCeeECC
Confidence 3588999999999976
No 5
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=34.21 E-value=14 Score=22.68 Aligned_cols=13 Identities=38% Similarity=1.073 Sum_probs=11.8
Q ss_pred eeeeeCCceeecc
Q psy13914 21 ETCGCAEGYSRDA 33 (87)
Q Consensus 21 Et~~~~eg~~rea 33 (87)
+.|.|.+||+|+.
T Consensus 47 ~GC~C~~G~vr~~ 59 (78)
T 2p3f_N 47 PACVCKDGFYRDT 59 (78)
T ss_dssp CEEEECSSCEEET
T ss_pred CCcCcCCCEeEcC
Confidence 8999999999975
No 6
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=29.06 E-value=27 Score=22.42 Aligned_cols=22 Identities=18% Similarity=0.330 Sum_probs=18.1
Q ss_pred EEeeeeeccCccCccceEEEEEe
Q psy13914 56 MVFPRLFTCPTLITSNFKIGERL 78 (87)
Q Consensus 56 mvfPRlftCPt~~t~~FkveFev 78 (87)
.-+|..|+||-=.+.+ +|+.++
T Consensus 18 ~~L~t~F~CPfCnh~~-sV~vki 39 (85)
T 1wii_A 18 GTLETQFTCPFCNHEK-SCDVKM 39 (85)
T ss_dssp CCCSSCCCCTTTCCSS-CEEEEE
T ss_pred CCCCCeEcCCCCCCCC-eEEEEE
Confidence 3689999999988887 777766
No 7
>2h9e_C Anti-coagulant protein C2; factor XA, NAPC2, hydrolase-hydrolase inhibitor C blood clotting; HET: DTY; 2.20A {Ancylostoma caninum} SCOP: g.22.1.1 PDB: 1cou_A
Probab=27.16 E-value=20 Score=22.21 Aligned_cols=17 Identities=35% Similarity=0.751 Sum_probs=10.2
Q ss_pred EEEEeeeeeCCceeecc
Q psy13914 17 LVRVETCGCAEGYSRDA 33 (87)
Q Consensus 17 LvRVEt~~~~eg~~rea 33 (87)
..-|+.|.|.+||+|+.
T Consensus 44 ~~C~~GC~C~~G~vr~~ 60 (84)
T 2h9e_C 44 RVCHQDCVCEEGFYRNK 60 (84)
T ss_dssp ------CEECSSCEECT
T ss_pred CCCCcCCCCCCCeEEcC
Confidence 35679999999999985
No 8
>1xe1_A Hypothetical protein PF0907; structural genomics, unknown function, protein structure INI secsg, conserved hypothetical protein; HET: MSE; 2.00A {Pyrococcus furiosus} SCOP: b.43.3.1
Probab=25.76 E-value=24 Score=23.92 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=24.9
Q ss_pred CCceeEEEEEEEEeeeeeCCceeecccceeeEEEeeCccc
Q psy13914 8 LPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVF 47 (87)
Q Consensus 8 ~pIkSIelQLvRVEt~~~~eg~~reaTEIQniQIadGdVc 47 (87)
..|||||.+--.++.+..++..+=-..-+.- ||..|||+
T Consensus 73 g~VkSIE~~~e~v~eA~~GdnVai~Ikg~~~-~I~~GdVL 111 (116)
T 1xe1_A 73 GGIVRIERNREKVEFAIAGDRIGISIEGKIG-KVKKGDVL 111 (116)
T ss_dssp EEEEEEEETTEEESEEETTCEEEEEEESCCC-CCCTTCEE
T ss_pred EEEEEEEECCcCcCCcCCCCEEEEEEECCcc-ccCCCcEE
Confidence 5688999988888888777753321111111 68888875
No 9
>3e07_A Protein spaetzle; cystine knot, TOLL ligand, antimicrobial, cytokine, developm protein, fungicide, glycoprotein, secreted; 2.40A {Drosophila melanogaster}
Probab=25.13 E-value=37 Score=22.77 Aligned_cols=12 Identities=33% Similarity=0.603 Sum_probs=10.2
Q ss_pred EEEEEEeeeeeC
Q psy13914 15 LQLVRVETCGCA 26 (87)
Q Consensus 15 lQLvRVEt~~~~ 26 (87)
-|.+|+|+|...
T Consensus 39 ~Q~vriE~C~~~ 50 (114)
T 3e07_A 39 KQAIQIEECEGA 50 (114)
T ss_dssp EEEEEEEEESST
T ss_pred EEEEEEEEeCCC
Confidence 599999999763
No 10
>1ata_A Ascaris trypsin inhibitor; proteinase inhibitor(trypsin); NMR {Ascaris suum} SCOP: g.22.1.1 PDB: 1atb_A 1atd_A 1ate_A
Probab=18.84 E-value=44 Score=19.61 Aligned_cols=14 Identities=43% Similarity=0.987 Sum_probs=11.9
Q ss_pred Ee-eeeeC--Cceeecc
Q psy13914 20 VE-TCGCA--EGYSRDA 33 (87)
Q Consensus 20 VE-t~~~~--eg~~rea 33 (87)
++ .|.|. +||+|+.
T Consensus 34 ~~~gC~C~~~~G~vr~~ 50 (62)
T 1ata_A 34 KPPRCECIASAGFVRDA 50 (62)
T ss_dssp CCSEEECCTTTTEEEET
T ss_pred CCCCcCcCCCCCeEECC
Confidence 55 89999 9999975
Done!