Your job contains 1 sequence.
>psy13914
IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR
LFTCPTLITSNFKIGERLDHYTTKNLK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13914
(87 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040801-6 - symbol:dscr3 "Down syndrome crit... 316 2.4e-28 1
UNIPROTKB|E1BSI1 - symbol:DSCR3 "Uncharacterized protein"... 310 1.0e-27 1
UNIPROTKB|A6QLW5 - symbol:DSCR3 "Uncharacterized protein"... 304 4.5e-27 1
UNIPROTKB|A8MTY9 - symbol:DSCR3 "Down syndrome critical r... 301 9.4e-27 1
UNIPROTKB|A8MY26 - symbol:DSCR3 "cDNA FLJ53689, highly si... 301 9.4e-27 1
UNIPROTKB|B7Z606 - symbol:DSCR3 "cDNA FLJ59969, highly si... 301 9.4e-27 1
UNIPROTKB|B7Z6B1 - symbol:DSCR3 "cDNA FLJ53650, highly si... 301 9.4e-27 1
UNIPROTKB|O14972 - symbol:DSCR3 "Down syndrome critical r... 301 9.4e-27 1
UNIPROTKB|E2RM98 - symbol:DSCR3 "Uncharacterized protein"... 298 1.9e-26 1
UNIPROTKB|F1SGV6 - symbol:DSCR3 "Uncharacterized protein"... 297 2.5e-26 1
MGI|MGI:1206040 - symbol:Dscr3 "Down syndrome critical re... 288 2.2e-25 1
FB|FBgn0037017 - symbol:CG4074 species:7227 "Drosophila m... 280 1.6e-24 1
DICTYBASE|DDB_G0292212 - symbol:vps26l "vacuolar protein ... 250 2.4e-21 1
UNIPROTKB|Q58DN0 - symbol:DSCR3 "Down syndrome critical r... 195 1.6e-15 1
UNIPROTKB|E7EWN9 - symbol:DSCR3 "Down syndrome critical r... 189 6.9e-15 1
TAIR|locus:2198075 - symbol:AT1G48550 "AT1G48550" species... 135 1.6e-08 1
>ZFIN|ZDB-GENE-040801-6 [details] [associations]
symbol:dscr3 "Down syndrome critical region gene 3"
species:7955 "Danio rerio" [GO:0007034 "vacuolar transport"
evidence=IEA] [GO:0030904 "retromer complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR005377
Pfam:PF03643 ZFIN:ZDB-GENE-040801-6 GO:GO:0007034 GO:GO:0030904
eggNOG:NOG321080 OMA:DSVQHQG CTD:10311 HOGENOM:HOG000294089
HOVERGEN:HBG051411 GeneTree:ENSGT00390000009324 OrthoDB:EOG4DV5MN
EMBL:CU633885 EMBL:BC075958 IPI:IPI00512940 RefSeq:NP_001003421.1
UniGene:Dr.87036 Ensembl:ENSDART00000036375 GeneID:445026
KEGG:dre:445026 NextBio:20831787 Uniprot:Q6DHL2
Length = 297
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 58/74 (78%), Positives = 68/74 (91%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E +E+PIKS+ELQLVRVETCGCAEGY+RDATEIQNIQI EG+V G+ IPIYMVFPR
Sbjct: 197 LVVENSEVPIKSIELQLVRVETCGCAEGYARDATEIQNIQIAEGDVCHGLSIPIYMVFPR 256
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 257 LFTCPTLETTNFKV 270
>UNIPROTKB|E1BSI1 [details] [associations]
symbol:DSCR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030904
"retromer complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR005377 Pfam:PF03643 GO:GO:0005634
GO:GO:0007034 GO:GO:0030904 OMA:DSVQHQG CTD:10311
GeneTree:ENSGT00390000009324 EMBL:AADN02010801 EMBL:AADN02010802
IPI:IPI00600513 RefSeq:XP_416728.1 UniGene:Gga.16653
ProteinModelPortal:E1BSI1 Ensembl:ENSGALT00000025863 GeneID:418519
KEGG:gga:418519 NextBio:20821691 Uniprot:E1BSI1
Length = 297
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 56/74 (75%), Positives = 66/74 (89%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E E +KS+ELQLVRVETCGCAEGY+RDATEIQNIQI +G+V G+PIPIYMVFPR
Sbjct: 197 LVVESAEAAVKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLPIPIYMVFPR 256
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 257 LFTCPTLETTNFKV 270
>UNIPROTKB|A6QLW5 [details] [associations]
symbol:DSCR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0030904 "retromer
complex" evidence=IEA] [GO:0007034 "vacuolar transport"
evidence=IEA] InterPro:IPR005377 Pfam:PF03643 GO:GO:0005634
GO:GO:0007034 GO:GO:0030904 eggNOG:NOG321080 OMA:DSVQHQG
HOGENOM:HOG000294089 HOVERGEN:HBG051411
GeneTree:ENSGT00390000009324 OrthoDB:EOG4DV5MN EMBL:DAAA02003581
EMBL:DAAA02003582 EMBL:DAAA02003583 EMBL:BC148109 IPI:IPI00843710
UniGene:Bt.6631 Ensembl:ENSBTAT00000050520 InParanoid:A6QLW5
Uniprot:A6QLW5
Length = 292
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 56/74 (75%), Positives = 66/74 (89%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E +E IKS+ELQLVRVETCGCAEGY+RDATEIQNIQI +G+V G+ IPIYMVFPR
Sbjct: 192 LVVESSEAAIKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSIPIYMVFPR 251
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 252 LFTCPTLETTNFKV 265
>UNIPROTKB|A8MTY9 [details] [associations]
symbol:DSCR3 "Down syndrome critical region protein 3"
species:9606 "Homo sapiens" [GO:0007034 "vacuolar transport"
evidence=IEA] [GO:0030904 "retromer complex" evidence=IEA]
InterPro:IPR005377 Pfam:PF03643 GO:GO:0007034 GO:GO:0030904
HGNC:HGNC:3044 HOGENOM:HOG000294089 HOVERGEN:HBG051411
ChiTaRS:DSCR3 EMBL:AP001432 EMBL:AP001412 IPI:IPI00789523
ProteinModelPortal:A8MTY9 STRING:A8MTY9 PRIDE:A8MTY9
Ensembl:ENST00000398998 ArrayExpress:A8MTY9 Bgee:A8MTY9
Uniprot:A8MTY9
Length = 249
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 55/74 (74%), Positives = 66/74 (89%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E +E I+SVELQLVRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PIYMVFPR
Sbjct: 149 LVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPR 208
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 209 LFTCPTLETTNFKV 222
>UNIPROTKB|A8MY26 [details] [associations]
symbol:DSCR3 "cDNA FLJ53689, highly similar to Down
syndrome critical region protein 3" species:9606 "Homo sapiens"
[GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030904
"retromer complex" evidence=IEA] InterPro:IPR005377 Pfam:PF03643
GO:GO:0007034 GO:GO:0030904 UniGene:Hs.369488 HGNC:HGNC:3044
HOGENOM:HOG000294089 HOVERGEN:HBG051411 ChiTaRS:DSCR3 EMBL:AP001432
EMBL:AP001412 EMBL:AK303624 IPI:IPI00790030 STRING:A8MY26
Ensembl:ENST00000399001 UCSC:uc011aeh.1 Uniprot:A8MY26
Length = 172
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 55/74 (74%), Positives = 66/74 (89%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E +E I+SVELQLVRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PIYMVFPR
Sbjct: 72 LVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPR 131
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 132 LFTCPTLETTNFKV 145
>UNIPROTKB|B7Z606 [details] [associations]
symbol:DSCR3 "cDNA FLJ59969, highly similar to Down
syndrome critical region protein 3" species:9606 "Homo sapiens"
[GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030904
"retromer complex" evidence=IEA] InterPro:IPR005377 Pfam:PF03643
GO:GO:0007034 GO:GO:0030904 UniGene:Hs.369488 HGNC:HGNC:3044
HOVERGEN:HBG051411 ChiTaRS:DSCR3 EMBL:AP001432 EMBL:AP001412
EMBL:AK299662 IPI:IPI00922353 STRING:B7Z606 Ensembl:ENST00000539844
UCSC:uc011aeg.1 Uniprot:B7Z606
Length = 220
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 55/74 (74%), Positives = 66/74 (89%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E +E I+SVELQLVRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PIYMVFPR
Sbjct: 120 LVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPR 179
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 180 LFTCPTLETTNFKV 193
>UNIPROTKB|B7Z6B1 [details] [associations]
symbol:DSCR3 "cDNA FLJ53650, highly similar to Down
syndrome critical region protein 3" species:9606 "Homo sapiens"
[GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030904
"retromer complex" evidence=IEA] InterPro:IPR005377 Pfam:PF03643
GO:GO:0007034 GO:GO:0030904 UniGene:Hs.369488 HGNC:HGNC:3044
HOGENOM:HOG000294089 ChiTaRS:DSCR3 EMBL:AP001432 EMBL:AP001412
EMBL:AK300024 EMBL:AK316460 IPI:IPI00790720 STRING:B7Z6B1
Ensembl:ENST00000476950 UCSC:uc010gnl.2 Uniprot:B7Z6B1
Length = 270
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 55/74 (74%), Positives = 66/74 (89%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E +E I+SVELQLVRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PIYMVFPR
Sbjct: 170 LVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPR 229
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 230 LFTCPTLETTNFKV 243
>UNIPROTKB|O14972 [details] [associations]
symbol:DSCR3 "Down syndrome critical region protein 3"
species:9606 "Homo sapiens" [GO:0007034 "vacuolar transport"
evidence=IEA] [GO:0030904 "retromer complex" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR005377 Pfam:PF03643 GO:GO:0005634 EMBL:CH471079
GO:GO:0007034 GO:GO:0030904 eggNOG:NOG321080 OMA:DSVQHQG
EMBL:D87343 EMBL:AK312707 EMBL:BC110655 IPI:IPI00298946 PIR:JC5698
RefSeq:NP_006043.1 UniGene:Hs.369488 ProteinModelPortal:O14972
DIP:DIP-47317N STRING:O14972 PhosphoSite:O14972 PaxDb:O14972
PRIDE:O14972 DNASU:10311 Ensembl:ENST00000309117 GeneID:10311
KEGG:hsa:10311 UCSC:uc002ywf.1 CTD:10311 GeneCards:GC21M038591
H-InvDB:HIX0022605 HGNC:HGNC:3044 HPA:HPA023288 MIM:605298
neXtProt:NX_O14972 PharmGKB:PA27496 HOGENOM:HOG000294089
HOVERGEN:HBG051411 InParanoid:O14972 ChiTaRS:DSCR3 GenomeRNAi:10311
NextBio:39075 ArrayExpress:O14972 Bgee:O14972 CleanEx:HS_DSCR3
Genevestigator:O14972 GermOnline:ENSG00000157538 Uniprot:O14972
Length = 297
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 55/74 (74%), Positives = 66/74 (89%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E +E I+SVELQLVRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PIYMVFPR
Sbjct: 197 LVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPR 256
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 257 LFTCPTLETTNFKV 270
>UNIPROTKB|E2RM98 [details] [associations]
symbol:DSCR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030904 "retromer complex" evidence=IEA]
[GO:0007034 "vacuolar transport" evidence=IEA] InterPro:IPR005377
Pfam:PF03643 GO:GO:0007034 GO:GO:0030904 OMA:DSVQHQG
GeneTree:ENSGT00390000009324 EMBL:AAEX03016527 EMBL:AAEX03016528
Ensembl:ENSCAFT00000015549 Uniprot:E2RM98
Length = 297
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 54/74 (72%), Positives = 66/74 (89%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E +E IKS+ELQLVRVETCGCAEGY+RDATEIQNIQI +G+V G+ +PI+MVFPR
Sbjct: 197 LVVESSEAAIKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIHMVFPR 256
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 257 LFTCPTLETTNFKV 270
>UNIPROTKB|F1SGV6 [details] [associations]
symbol:DSCR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030904 "retromer
complex" evidence=IEA] [GO:0007034 "vacuolar transport"
evidence=IEA] InterPro:IPR005377 Pfam:PF03643 GO:GO:0005634
GO:GO:0007034 GO:GO:0030904 OMA:DSVQHQG
GeneTree:ENSGT00390000009324 EMBL:CU862004 RefSeq:XP_003483406.1
Ensembl:ENSSSCT00000013195 GeneID:100738307 KEGG:ssc:100738307
Uniprot:F1SGV6
Length = 297
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 54/74 (72%), Positives = 65/74 (87%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E +E IKS+ELQLVRVETCGCAEGY+RDATEIQNIQI +G+V + +PIYMVFPR
Sbjct: 197 LVVESSEAAIKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRSLSVPIYMVFPR 256
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 257 LFTCPTLETTNFKV 270
>MGI|MGI:1206040 [details] [associations]
symbol:Dscr3 "Down syndrome critical region gene 3"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030904
"retromer complex" evidence=IEA] InterPro:IPR005377 Pfam:PF03643
MGI:MGI:1206040 GO:GO:0005634 GO:GO:0007034 GO:GO:0030904
eggNOG:NOG321080 OMA:DSVQHQG CTD:10311 HOGENOM:HOG000294089
HOVERGEN:HBG051411 EMBL:AB001990 EMBL:AK077485 EMBL:AK077628
EMBL:BC003740 IPI:IPI00126499 PIR:JC5699 RefSeq:NP_031860.1
UniGene:Mm.7472 ProteinModelPortal:O35075 STRING:O35075
PhosphoSite:O35075 PaxDb:O35075 PRIDE:O35075
Ensembl:ENSMUST00000023615 GeneID:13185 KEGG:mmu:13185
GeneTree:ENSGT00390000009324 InParanoid:O35075 OrthoDB:EOG4DV5MN
NextBio:283304 Bgee:O35075 CleanEx:MM_DSCR3 Genevestigator:O35075
GermOnline:ENSMUSG00000022898 Uniprot:O35075
Length = 297
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 50/74 (67%), Positives = 65/74 (87%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+V+E ++ I+S+ELQLVRVETCGCAEGY+RDATEIQNIQI +G++ + +P+YMVFPR
Sbjct: 197 LVVEHSDAAIRSIELQLVRVETCGCAEGYARDATEIQNIQIADGDICRNLSVPLYMVFPR 256
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL T+NFK+
Sbjct: 257 LFTCPTLETTNFKV 270
>FB|FBgn0037017 [details] [associations]
symbol:CG4074 species:7227 "Drosophila melanogaster"
[GO:0030904 "retromer complex" evidence=IEA] [GO:0007034 "vacuolar
transport" evidence=IEA] InterPro:IPR005377 Pfam:PF03643
EMBL:AE014296 GO:GO:0007034 GO:GO:0030904 eggNOG:NOG321080
OMA:DSVQHQG GeneTree:ENSGT00390000009324 EMBL:BT023306
RefSeq:NP_649249.1 UniGene:Dm.24022 SMR:Q9VPC3
EnsemblMetazoa:FBtr0078280 GeneID:40290 KEGG:dme:Dmel_CG4074
UCSC:CG4074-RA FlyBase:FBgn0037017 InParanoid:Q9VPC3
OrthoDB:EOG4Q83D7 GenomeRNAi:40290 NextBio:818005 Uniprot:Q9VPC3
Length = 295
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 51/74 (68%), Positives = 61/74 (82%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
I ++ TE IKS+E+QLVRVETCGC EGYS+DATEIQ IQI +GNV + +PI+MV PR
Sbjct: 182 ITVQHTEAAIKSIEMQLVRVETCGCDEGYSKDATEIQTIQIADGNVLPKLELPIHMVLPR 241
Query: 61 LFTCPTLITSNFKI 74
LFTCPTL+T NFKI
Sbjct: 242 LFTCPTLLTKNFKI 255
>DICTYBASE|DDB_G0292212 [details] [associations]
symbol:vps26l "vacuolar protein sorting-associated
protein 26 family protein" species:44689 "Dictyostelium discoideum"
[GO:0030904 "retromer complex" evidence=IEA] [GO:0007034 "vacuolar
transport" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005377 Pfam:PF03643
dictyBase:DDB_G0292212 GO:GO:0007034 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0030904 EMBL:AAFI02000188 RefSeq:XP_629739.1
ProteinModelPortal:Q54DI8 PRIDE:Q54DI8 EnsemblProtists:DDB0267115
GeneID:8628568 KEGG:ddi:DDB_G0292212 eggNOG:NOG321080 OMA:DSVQHQG
ProtClustDB:CLSZ2429449 Uniprot:Q54DI8
Length = 304
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
++IE + IKSVELQLVRVETCGCA+GY+R+ TEIQNIQI +G+++ IP+YMVFPR
Sbjct: 205 MIIESADTVIKSVELQLVRVETCGCADGYAREVTEIQNIQIADGDIWRNFKIPLYMVFPR 264
Query: 61 LFTCPTLITSNFKI 74
LFTC + FKI
Sbjct: 265 LFTCISTAGKTFKI 278
>UNIPROTKB|Q58DN0 [details] [associations]
symbol:DSCR3 "Down syndrome critical region protein 3"
species:9913 "Bos taurus" [GO:0030904 "retromer complex"
evidence=IEA] [GO:0007034 "vacuolar transport" evidence=IEA]
InterPro:IPR005377 Pfam:PF03643 GO:GO:0007034 GO:GO:0030904
CTD:10311 HOGENOM:HOG000294089 HOVERGEN:HBG051411
GeneTree:ENSGT00390000009324 EMBL:DAAA02003581 EMBL:DAAA02003582
EMBL:DAAA02003583 UniGene:Bt.6631 EMBL:BT021567 IPI:IPI00714351
RefSeq:NP_001035600.2 Ensembl:ENSBTAT00000006292 GeneID:507647
KEGG:bta:507647 NextBio:20868157 Uniprot:Q58DN0
Length = 262
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 37/53 (69%), Positives = 44/53 (83%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIP 53
+V+E +E IKS+ELQLVRVETCGCAEGY+RDATEIQNIQI +G+V P P
Sbjct: 197 LVVESSEAAIKSIELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRASPSP 249
>UNIPROTKB|E7EWN9 [details] [associations]
symbol:DSCR3 "Down syndrome critical region protein 3"
species:9606 "Homo sapiens" [GO:0007034 "vacuolar transport"
evidence=IEA] [GO:0030904 "retromer complex" evidence=IEA]
InterPro:IPR005377 Pfam:PF03643 GO:GO:0007034 GO:GO:0030904
HGNC:HGNC:3044 ChiTaRS:DSCR3 EMBL:AP001432 EMBL:AP001412
IPI:IPI00385046 ProteinModelPortal:E7EWN9 PRIDE:E7EWN9
Ensembl:ENST00000288304 ArrayExpress:E7EWN9 Bgee:E7EWN9
Uniprot:E7EWN9
Length = 253
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 29 YSRDATEIQNIQIGEGNVFTGIPIPIYMVFPRLFTCPTLITSNFKI 74
Y+RDATEIQNIQI +G+V G+ +PIYMVFPRLFTCPTL T+NFK+
Sbjct: 181 YARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKV 226
>TAIR|locus:2198075 [details] [associations]
symbol:AT1G48550 "AT1G48550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0006886 "intracellular protein
transport" evidence=ISS] [GO:0007034 "vacuolar transport"
evidence=IEA] [GO:0030904 "retromer complex" evidence=IEA]
[GO:0042147 "retrograde transport, endosome to Golgi" evidence=ISS]
[GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR005377 Pfam:PF03643 EMBL:CP002684 GO:GO:0007034
GO:GO:0030904 OMA:DSVQHQG IPI:IPI00522406 RefSeq:NP_175288.1
UniGene:At.43020 ProteinModelPortal:F4HYH6 PRIDE:F4HYH6
EnsemblPlants:AT1G48550.1 GeneID:841276 KEGG:ath:AT1G48550
Uniprot:F4HYH6
Length = 327
Score = 135 (52.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 24/74 (32%), Positives = 45/74 (60%)
Query: 1 IVIEQTELPIKSVELQLVRVETCGCAEGYSRDATEIQNIQIGEGNVFTGIPIPIYMVFPR 60
+ +E + +PI S+++ L+RVE+ E + + IQ+ QI +G+V + +PIY++ PR
Sbjct: 205 LTVEASSVPITSIDIHLLRVESIIVGERIVTETSLIQSTQIADGDVCRNMTLPIYVLLPR 264
Query: 61 LFTCPTLITSNFKI 74
L CP++ F +
Sbjct: 265 LLMCPSVFAGPFSV 278
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.141 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 87 87 0.00091 102 3 11 22 0.44 29
29 0.48 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 497 (53 KB)
Total size of DFA: 93 KB (2068 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.96u 0.14s 9.10t Elapsed: 00:00:01
Total cpu time: 8.96u 0.14s 9.10t Elapsed: 00:00:01
Start: Thu Aug 15 16:13:37 2013 End: Thu Aug 15 16:13:38 2013