BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13922
(509 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/490 (45%), Positives = 288/490 (58%), Gaps = 91/490 (18%)
Query: 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQ-PADWQDV 79
D P FP+D K+RA+ +L C G S+GSY+ S G+ IR VA YI+RRDG PAD ++
Sbjct: 97 LDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNI 156
Query: 80 ILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQW 139
L+ GASDGI ++LK+L+ + GV+IPIPQYPLYSA ++E + Q+ YYLDE W
Sbjct: 157 YLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCW 216
Query: 140 GLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199
L ++EL R++ EA+ HC+P+ + IINPGNPTGQV +++ I+D+I FA EKLFL ADEV
Sbjct: 217 ALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEV 276
Query: 200 YQDNVYAEGSKFYSFKKVLVEMGEPYKS-MELASFMSCSKGYMGECGLRGGYSEVINLDP 258
YQDNVY+ +F+SFKKVL EMG Y S +ELASF S SKGYMGECG RGGY EVINL P
Sbjct: 277 YQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHP 336
Query: 259 GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDC 318
+K L K +S LCP V GQ MD
Sbjct: 337 EIKGQLVKLLSVRLCPPV----------------------------------SGQAAMDI 362
Query: 319 VVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMXX 378
VVNPP GE S+EQFSREK+SVL +L ++AK+ D FN + G+ CNP+QGA
Sbjct: 363 VVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGA--------- 413
Query: 379 XXXXXXXXXXXXXCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAI 438
+YAF + +P +A+
Sbjct: 414 -----------------MYAFPRI------FIPA-----------------------KAV 427
Query: 439 AKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498
A+A P + Y + LE TGIC+VPG+GFGQ GTYHFR TILP EKLK +L+K +
Sbjct: 428 EAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVK 487
Query: 499 EFHEEFLAKY 508
+FH FL KY
Sbjct: 488 DFHINFLEKY 497
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 245 GLRGGYSEVINLDPG-VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVL 303
G++ ++EVI + G +AM + I+ + V+AL + P L D P FP+D K+RA+ +L
Sbjct: 57 GIKKPFTEVIRANIGDAQAMGQQPITFLR--QVMALCTYPNLLDSPSFPEDAKKRARRIL 114
Query: 304 DGCRGQSVG 312
C G S+G
Sbjct: 115 QACGGNSLG 123
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 341 bits (874), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 187/485 (38%), Positives = 262/485 (54%), Gaps = 93/485 (19%)
Query: 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGA 85
F D RA+ +L G++ G+Y+ S GI +R +A I+ RDG PA+ D+ L+ GA
Sbjct: 107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGA 166
Query: 86 SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISE 145
S G+ +++LLI + +K G+L+PIPQYPLYSAS+A + YYL+ES WGL S+
Sbjct: 167 SPGVHLMMQLLIRN---EKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSD 223
Query: 146 LERSITEAR-KHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204
+++ + +AR + N RA+V+INPGNPTGQVL +EN DI+KF E L L ADEVYQ+N+
Sbjct: 224 VKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENI 283
Query: 205 YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAML 264
Y + KF+SFKK++ +G + + L S+ S SKGY GECG RGGY E+ V+ +
Sbjct: 284 YVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQI 343
Query: 265 HKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQ 324
+K S LC + GQ + V+NPP+
Sbjct: 344 YKIASVNLCSNI----------------------------------TGQILASLVMNPPK 369
Query: 325 PGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMXXXXXXXX 384
+ SY + EK +L SL +RAK + FN +EG++CN +GAMY FPQ
Sbjct: 370 ASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQ--------- 420
Query: 385 XXXXXXXCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAE 444
IC+ Q+AI AKA
Sbjct: 421 ----------------------ICL------------------------PQKAIEAAKAA 434
Query: 445 GKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHEEF 504
K P YA LE TGI +VPG+GFGQVPGT+HFR TILPQ +K+ A++ +F FHE F
Sbjct: 435 NKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAF 494
Query: 505 LAKYK 509
+++Y+
Sbjct: 495 MSEYR 499
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 149/380 (39%), Gaps = 77/380 (20%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108
Y DS G+ +R+ + + R++G DV ++A ++ ++ + L++ D +L
Sbjct: 74 YGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDE----IL 129
Query: 109 IPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168
+P P YP Y+ + + + + Y E + W I ++ + IT+ K AI +INP
Sbjct: 130 VPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTK-----AIAVINPN 184
Query: 169 NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSM 228
NPTG + K+ +++I+ A ++ + +DE+Y Y EG + G K +
Sbjct: 185 NPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTY-EGEH--------ISPGSLTKDV 235
Query: 229 ELASFMSCSKGYMGECGLRGGYSEVI---NLDPGVKAMLHKSISAMLCPTVLALVSLPQL 285
+ SK Y G R GY + N V+ + + LCP P
Sbjct: 236 PVIVMNGLSKVYFA-TGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNT------PAQ 288
Query: 286 FDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLK 345
F A + G G MD + + + LK
Sbjct: 289 F--------------AAIAGLTGP------MDYL------------------KEYMKKLK 310
Query: 346 QRAKMVADTFNSIEGMSCNPVQGAMYAFPQMXXXXXXXXXXXXXXXCPSVLYAFELLERT 405
+R + N I G+S QGA Y FP++ + ++L
Sbjct: 311 ERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKE----------FVLDVLHNA 360
Query: 406 GICIVPGAGFGQVPGTYHFR 425
+ V G+GFG+ G HFR
Sbjct: 361 HVLFVHGSGFGEY-GAGHFR 379
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 452 YAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHEEFL 505
+ + L + V G+GFG+ G HFR LP E L+ +++F +F +E L
Sbjct: 352 FVLDVLHNAHVLFVHGSGFGEY-GAGHFRAVFLPPIEILEEAMDRFEKFMKERL 404
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 34 AQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVL 93
QA+ D Y S G R VA Y + P + +DVIL++G S I+ L
Sbjct: 54 TQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPEA-PLEAKDVILTSGCSQAIELCL 112
Query: 94 KLLIEDVDGKKPG--VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151
+L PG +LIP P + LY +E Y L K W + + +LE S+
Sbjct: 113 AVL------ANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQLE-SLI 165
Query: 152 EARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207
+ + C +V+ NP NP G V +K ++Q I+ A R+ + + ADE+Y D V+++
Sbjct: 166 DEKTAC----LVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVFSD 217
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 34 AQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVL 93
QA+ D Y S G R +A Y + P + +DVIL++G S I L
Sbjct: 77 TQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEA-PLEAKDVILTSGCSQAIDLCL 135
Query: 94 KLLIEDVDGKKPG--VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151
+L PG +L+P P + LY +E Y L K W + + +LE I
Sbjct: 136 AVL------ANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLID 189
Query: 152 EARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207
E + C +++ NP NP G V +K ++Q I+ A R+ + + ADE+Y D V+++
Sbjct: 190 E-KTAC----LIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSD 240
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 104/218 (47%), Gaps = 9/218 (4%)
Query: 44 QSVGSYTDSPGIEIIRRHVAQYISRRDGQPA--DWQDVILSAGASDGIKSVLKLLIEDVD 101
+++ ++ D G+ R+ +A+++ + G D + V+++ GA+ ++++ L + D
Sbjct: 74 KAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGD 133
Query: 102 GKKPGVLIPIPQYPLYSASLA-EFNMEQIGYYLDESKQWGLPISELERSITEARK-HCNP 159
L+P P YP ++ L ++ I + + S + + ++ + A+K +
Sbjct: 134 A----FLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKV 189
Query: 160 RAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLV 219
+ +++ NP NP G L K+ ++ ++ F ++ + L DE+Y V+ + +F S ++L
Sbjct: 190 KGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVF-DTPQFVSIAEILD 248
Query: 220 EMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257
E Y + +L + MG G R G N D
Sbjct: 249 EQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDD 286
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 107/199 (53%), Gaps = 25/199 (12%)
Query: 23 DPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DV 79
+P F P +K+ A+ LD + + Y + G+ +R +A+ + +++G AD + ++
Sbjct: 34 EPDFDTPQHIKEYAKEALD----KGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEI 89
Query: 80 ILSAGASD----GIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDE 135
++ GA+ G+ + LK DG++ VLIP P + Y+ ++ + + E
Sbjct: 90 MVLLGANQAFLMGLSAFLK------DGEE--VLIPTPAFVSYAPAVILAGGKPVEVPTYE 141
Query: 136 SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195
++ L + EL++ +T+ RA++I +P NPTG VLTK+++++I F L +
Sbjct: 142 EDEFRLNVDELKKYVTD-----KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196
Query: 196 ADEVYQDNVYAEGSKFYSF 214
+DEVY+ +Y + ++ YS
Sbjct: 197 SDEVYEHFIY-DDARHYSI 214
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 107/199 (53%), Gaps = 25/199 (12%)
Query: 23 DPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DV 79
+P F P +K+ A+ LD + + Y + G+ +R +A+ + +++G AD + ++
Sbjct: 35 EPDFDTPQHIKEYAKEALD----KGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEI 90
Query: 80 ILSAGASD----GIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDE 135
++ GA+ G+ + LK DG++ VLIP P + Y+ ++ + + E
Sbjct: 91 MVLLGANQAFLMGLSAFLK------DGEE--VLIPTPAFVSYAPAVILAGGKPVEVPTYE 142
Query: 136 SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195
++ L + EL++ +T+ RA++I +P NPTG VLTK+++++I F L +
Sbjct: 143 EDEFRLNVDELKKYVTD-----KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 197
Query: 196 ADEVYQDNVYAEGSKFYSF 214
+DEVY+ +Y + ++ YS
Sbjct: 198 SDEVYEHFIY-DDARHYSI 215
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDES 136
+V+L +G S GI + + + D L+P P +P Y + + Y
Sbjct: 105 DNVVLCSGGSHGILMAITAICDAGDY----ALVPQPGFPHYETVCKAYGIGMHFYNCRPE 160
Query: 137 KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196
W + E+ R K + +++ NP NP G ++++++DI++ A +L LF+
Sbjct: 161 NDWEADLDEIRR-----LKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFS 215
Query: 197 DEVYQDNVYAEGSKFYSFKKV 217
DE+Y V+ +F V
Sbjct: 216 DEIYAGMVFKGKDPNATFTSV 236
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 96/377 (25%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPADW--QDVILSAGASDGIKSVLKLLIEDVDGKKPG 106
YTDS GI +R +++ +D AD ++I++ G+S G+ L +I+D D
Sbjct: 62 YTDSRGILELREKISEL--YKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDE---- 115
Query: 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN 166
VLI P YP Y + + + + D + LE ++++ K AI+I +
Sbjct: 116 VLIQNPCYPCYKNFIRFLGAKPV--FCD------FTVESLEEALSDKTK-----AIIINS 162
Query: 167 PGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYK 226
P NP G+V+ +E I +FA+ ++ +DE+Y VY EG K YS +E E
Sbjct: 163 PSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVY-EG-KCYS----AIEFDE--- 209
Query: 227 SMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAML-CPTVLALVSLPQL 285
++E ++ G R GY VI+ D ++A+L + + PT+ +L
Sbjct: 210 NLEKTILINGFSXLYAMTGWRIGY--VISNDEIIEAILKLQQNLFISAPTISQYAALKA- 266
Query: 286 FDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLK 345
F + ++ +++ ++F R ++ VL
Sbjct: 267 -----FEKETEREINSMI---------------------------KEFDRRRRLVL---- 290
Query: 346 QRAKMVADTFNSIEGMSCNPVQGAMYAFPQMXXXXXXXXXXXXXXXCPSVLYAFELLERT 405
K V D G N GA Y FP + +A++LL+
Sbjct: 291 ---KYVKDF-----GWEVNNPIGAYYVFPNIGEDGRE--------------FAYKLLKEK 328
Query: 406 GICIVPGAGFGQVPGTY 422
+ + PG GFG Y
Sbjct: 329 FVALTPGIGFGSKGKNY 345
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 452 YAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREF 500
+A++ L+ + + PG GFG G + R + E +K LE+ +EF
Sbjct: 320 FAYKLLKEKFVALTPGIGFGS-KGKNYIRISYANSYENIKEGLERIKEF 367
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG-- 106
Y+ S GI +R A Y RR ++V+++ G S+ I ++ PG
Sbjct: 75 YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVI------ANPGDE 128
Query: 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN 166
+L+ P Y Y+A ++ I + + +P LE I E K IV+ N
Sbjct: 129 ILVLEPFYANYNAFAKIAGVKLIPVTRRXEEGFAIP-QNLESFINERTK-----GIVLSN 182
Query: 167 PGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVY 205
P NPTG V K+ + +++ A R LFL DEVY + V+
Sbjct: 183 PCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVF 221
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPA--DWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106
+ D G+ ++ + +++ G D ++L+AGA+ ++ + L + PG
Sbjct: 65 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLAD------PG 118
Query: 107 --VLIPIPQYPLYSASLA-EFNMEQIGYYLDESKQWGLPISELERSITEARK-HCNPRAI 162
VLIP P YP + L +E + + S + + + LE + EA K + + +
Sbjct: 119 EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 178
Query: 163 VIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVL 218
++ NP NP G +T+ + ++ F + + L +DE+Y ++ S F S +VL
Sbjct: 179 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS-FISVMEVL 233
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPA--DWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106
+ D G+ ++ + +++ G D ++L+AGA+ ++ + L + PG
Sbjct: 80 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLAD------PG 133
Query: 107 --VLIPIPQYPLYSASLA-EFNMEQIGYYLDESKQWGLPISELERSITEARK-HCNPRAI 162
VLIP P YP + L +E + + S + + + LE + EA K + + +
Sbjct: 134 EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 193
Query: 163 VIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVL 218
++ NP NP G +T+ + ++ F + + L +DE+Y ++ S F S +VL
Sbjct: 194 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS-FISVMEVL 248
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPA--DWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106
+ D G+ ++ + +++ G D ++L+AGA+ ++ + L + PG
Sbjct: 82 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLAD------PG 135
Query: 107 --VLIPIPQYPLYSASLA-EFNMEQIGYYLDESKQWGLPISELERSITEARK-HCNPRAI 162
VLIP P YP + L +E + + S + + + LE + EA K + + +
Sbjct: 136 EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 195
Query: 163 VIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVL 218
++ NP NP G +T+ + ++ F + + L +DE+Y ++ S F S +VL
Sbjct: 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS-FISVMEVL 250
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPA--DWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106
+ D G+ ++ + +++ G D ++L+AGA+ ++ + L + PG
Sbjct: 82 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLAD------PG 135
Query: 107 --VLIPIPQYPLYSASLA-EFNMEQIGYYLDESKQWGLPISELERSITEARK-HCNPRAI 162
VLIP P YP + L +E + + S + + + LE + EA K + + +
Sbjct: 136 EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 195
Query: 163 VIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVL 218
++ NP NP G +T+ + ++ F + + L +DE+Y ++ S F S +VL
Sbjct: 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS-FISVMEVL 250
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 32/168 (19%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108
Y G+ +R +A+ + + + V++++GA++ + +L+ L+ G V+
Sbjct: 57 YAPPAGLPALREALAEEFA------VEPESVVVTSGATEALYVLLQSLV----GPGDEVV 106
Query: 109 IPIPQYPLY---------SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNP 159
+ P + +Y A L ++ G+ LD +S LE+++T
Sbjct: 107 VLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLD--------LSALEKALT-----PRT 153
Query: 160 RAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207
RA+++ P NPTG V + ++ I + A LFL +DEVY + Y E
Sbjct: 154 RALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGE 201
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 49 YTDSPGIEIIRRHVAQ-YISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGV 107
Y+ S GI +RR ++ Y R D Q + I++ G+ +G+ ++ ++ D +
Sbjct: 71 YSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDT----I 126
Query: 108 LIPIPQYPL--YSASLAEFNMEQIGYYLDESKQWGLP----ISELERSITEARKHCNPRA 161
L+P P YP+ Y A +A + + +P +ELER+I E+ PR
Sbjct: 127 LVPNPSYPIHIYGAVIAGAQVRSVPL---------VPGIDFFNELERAIRESIP--KPRM 175
Query: 162 IVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEM 221
+++ P NPT Q + + + ++ A + + + D Y D VY +G K S +V
Sbjct: 176 MILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVY-DGWKAPSIMQV---- 230
Query: 222 GEPYKSMELASFMSCSKGYMGECGLRGGY 250
P F + SK Y G R G+
Sbjct: 231 --PGAKDIAVEFFTLSKSY-NMAGWRIGF 256
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 21/193 (10%)
Query: 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI 80
FD P + +RA A Q Y GI +R +A+ R +G ++ I
Sbjct: 43 FDTPEHVKEAARRALA-------QGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETI 95
Query: 81 LSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWG 140
++ G S + ++ + +++ G + VL P Y S E G ++
Sbjct: 96 VTVGGSQALFNLFQAILDP--GDEVIVLSP------YWVSYPEMVRFAGGVVVEVET--- 144
Query: 141 LPISELERSITEARKHCNPR--AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198
LP R+ PR A+V+ +P NPTG V KE ++ + + A +L +DE
Sbjct: 145 LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDE 204
Query: 199 VYQDNVYAEGSKF 211
+Y+ +Y EG F
Sbjct: 205 IYEHLLY-EGEHF 216
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 21/193 (10%)
Query: 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI 80
FD P + +RA A Q Y GI +R +A+ R +G ++ I
Sbjct: 43 FDTPEHVKEAARRALA-------QGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETI 95
Query: 81 LSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWG 140
++ G S + ++ + +++ G + VL P Y S E G ++
Sbjct: 96 VTVGGSQALFNLFQAILDP--GDEVIVLSP------YWVSYPEMVRFAGGVVVEVET--- 144
Query: 141 LPISELERSITEARKHCNPR--AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198
LP R+ PR A+V+ +P NPTG V KE ++ + + A +L +DE
Sbjct: 145 LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDE 204
Query: 199 VYQDNVYAEGSKF 211
+Y+ +Y EG F
Sbjct: 205 IYEHLLY-EGEHF 216
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 21/193 (10%)
Query: 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI 80
FD P + +RA A Q Y GI +R +A+ R +G ++ I
Sbjct: 43 FDTPEHVKEAARRALA-------QGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETI 95
Query: 81 LSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWG 140
++ G S + ++ + +++ G + VL P Y S E G ++
Sbjct: 96 VTVGGSQALFNLFQAILDP--GDEVIVLSP------YWVSYPEMVRFAGGVVVEVET--- 144
Query: 141 LPISELERSITEARKHCNPR--AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198
LP R+ PR A+V+ +P NPTG V KE ++ + + A +L +DE
Sbjct: 145 LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDE 204
Query: 199 VYQDNVYAEGSKF 211
+Y+ +Y EG F
Sbjct: 205 IYEHLLY-EGEHF 216
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 21/193 (10%)
Query: 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI 80
FD P + +RA A Q Y GI +R +A+ R +G ++ I
Sbjct: 43 FDTPEHVKEAARRALA-------QGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETI 95
Query: 81 LSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWG 140
++ G S + ++ + +++ G + VL P Y S E G ++
Sbjct: 96 VTVGGSQALFNLFQAILDP--GDEVIVLSP------YWVSYPEMVRFAGGVVVEVET--- 144
Query: 141 LPISELERSITEARKHCNPR--AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198
LP R+ PR A+V+ +P NPTG V KE ++ + + A +L +DE
Sbjct: 145 LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDE 204
Query: 199 VYQDNVYAEGSKF 211
+Y+ +Y EG F
Sbjct: 205 IYEHLLY-EGEHF 216
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI 80
FD P + +RA A Q Y GI +R +A+ R +G ++ I
Sbjct: 43 FDTPEHVKEAARRALA-------QGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETI 95
Query: 81 LSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWG 140
++ G + ++ + +++ G + VL P Y S E G ++
Sbjct: 96 VTVGGKQALFNLFQAILDP--GDEVIVLSP------YWVSYPEMVRFAGGVVVEVET--- 144
Query: 141 LPISELERSITEARKHCNPR--AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198
LP R+ PR A+V+ +P NPTG V KE ++ + + A +L +DE
Sbjct: 145 LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDE 204
Query: 199 VYQDNVYAEGSKF 211
+Y+ +Y EG F
Sbjct: 205 IYEHLLY-EGEHF 216
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI 80
FD P + +RA A Q Y GI +R +A+ R +G ++ I
Sbjct: 43 FDTPEHVKEAARRALA-------QGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETI 95
Query: 81 LSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWG 140
++ G + ++ + +++ G + VL P Y S E G ++
Sbjct: 96 VTVGGKQALFNLFQAILDP--GDEVIVLSP------YWVSYPEMVRFAGGVVVEVET--- 144
Query: 141 LPISELERSITEARKHCNPR--AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198
LP R+ PR A+V+ +P NPTG V KE ++ + + A +L +DE
Sbjct: 145 LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDE 204
Query: 199 VYQDNVYAEGSKF 211
+Y+ +Y EG F
Sbjct: 205 IYEHLLY-EGEHF 216
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108
YTD GI +R +A+ I R + V+++ GA + + L++ G + V
Sbjct: 74 YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDP--GDEVIVF 131
Query: 109 IPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168
P+ + LA + + ++ SK + + E+E + +A++I +P
Sbjct: 132 SPVWVSYIPQIILAGGTVNVVETFM--SKNFQPSLEEVEGLLV-----GKTKAVLINSPN 184
Query: 169 NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207
NPTG V +E ++ +++ A + ++ +DEVY VY +
Sbjct: 185 NPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD 223
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 13/183 (7%)
Query: 23 DPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILS 82
D P + + A+A L+ Q Y + G +R +AQ + R +G +++++
Sbjct: 41 DFNTPKHIVEAAKAALE----QGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVT 96
Query: 83 AGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLP 142
G I +++ +IE D V+IP P + Y + + Q+ +
Sbjct: 97 NGGKQSIFNLMLAMIEPGDE----VIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVS 152
Query: 143 ISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQD 202
++ ++IT K +V P NPTG V T + ++ I + A L++ +DE+Y+
Sbjct: 153 PEQIRQAITPKTK-----LLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEK 207
Query: 203 NVY 205
+Y
Sbjct: 208 ILY 210
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 329 SYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMXXXXXXXXXXXX 388
+YE Q +L + +R + + D N++ G+ C GA Y FP +
Sbjct: 281 AYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRS------ 334
Query: 389 XXXCPSVLYAFELLERTGICIVPGAGFG 416
S+ + ELL++ + VPGA FG
Sbjct: 335 -----SLDFCSELLDQHQVATVPGAAFG 357
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 12/174 (6%)
Query: 40 GCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99
G + V +YT+ G IR +A ++ G P D +D ++ + G + L L +
Sbjct: 65 GVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLI---ITPGTQGALFLAVAA 121
Query: 100 VDGKKPGVLIPIPQYPLYSASLAEFNME----QIGYYLDESKQWGLPISELERSITEARK 155
+ V I P Y + F E Q+ Y + + GL ++ LE +
Sbjct: 122 TVARGDKVAIVQPDYFANRKLVEFFEGEXVPVQLDYVSADETRAGLDLTGLEEAF----- 176
Query: 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGS 209
R + NP NP G V + E I I A R + AD++Y YA S
Sbjct: 177 KAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGAS 230
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPG--VLIPIPQYPLYSASLAEFNMEQIGYYL-D 134
+V+++ GA++ I + + L+E PG VL+ P Y YS +A ++ L
Sbjct: 88 EVLVTVGATEAIAAAVLGLVE------PGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVP 141
Query: 135 ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFL 194
+ + + L L R++T RA++I +P NPTG VL+ + I + A L +
Sbjct: 142 DGRGFALDADALRRAVTP-----RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVV 196
Query: 195 FADEVYQDNVY 205
DEVY+ V+
Sbjct: 197 ITDEVYEHLVF 207
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 22/174 (12%)
Query: 35 QAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLK 94
QA+ D + ++ G D ++ + A++ + R G A + + I V++
Sbjct: 43 QAITDAVQREAFGYQPDG---SLLSQATAEFYADRYGYQARPEWIF-------PIPDVVR 92
Query: 95 LLIEDVDGKKPG---VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151
L +D P V++P P YP + L+ E G ++D + G+ + ++E+
Sbjct: 93 GLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQRE--GIFIDATG--GINLHDVEKGF- 147
Query: 152 EARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVY 205
R+I++ NP NP G V E + ++ AHR + DE++ V+
Sbjct: 148 ----QAGARSILLCNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVF 197
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 87 DGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYL-DESKQWGLPISE 145
+G+ + + I+ + VLI P YP ++ S+ N + + L +E+ + + +
Sbjct: 96 EGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQ 155
Query: 146 LERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVY 205
LE I E + + ++ NP NP G+V +E ++ I + + L +DE++QD +
Sbjct: 156 LENDIVEN----DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQD-LT 210
Query: 206 AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN 255
G + SF V + + A +S + G + Y+ + N
Sbjct: 211 LFGHEHVSFNTVSPDFK------DFALVLSSATKTFNIAGTKNSYAIIEN 254
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 49 YTDSPGIEIIRRHVAQYISRR-DGQPADWQDVILSA-GASDGIKSVLKLLIEDV-DGKKP 105
Y + G+ +R+ A ++ RR DG D + IL G+ + + S ++ ++ V DG KP
Sbjct: 62 YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKP 121
Query: 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELE---RSITEARKHCNPRAI 162
++ P P Y +Y + +I + P RSI+E + +
Sbjct: 122 AIVSPNPFYQIYEGATL-LGGGEIHFA-------NCPAPSFNPDWRSISE-EVWKRTKLV 172
Query: 163 VIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMG 222
+ +P NP+G VL + +++ + + +DE Y + +Y +G+K + ++G
Sbjct: 173 FVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSE-IYFDGNKPLGCLQAAAQLG 231
Query: 223 EPYKSMELASFMSCSKGYMGECGLRGGY 250
+L F S S GLR G+
Sbjct: 232 R--SRQKLLXFTSLSX-RSNVPGLRSGF 256
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108
YT + G R +A++++ G + ++ + GA+ + + L D + +
Sbjct: 72 YTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIA 131
Query: 109 IPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168
P+Y ++ + +E +++ + + LE I + + R ++I +P
Sbjct: 132 PYFPEYKVFVNAAGARLVEVPA----DTEHFQIDFDALEERI-----NAHTRGVIINSPN 182
Query: 169 NPTGQVLTKENIQDIIKFAHREK------LFLFADEVYQDNVY 205
NP+G V ++E I+ + ++ +F+ ADE Y++ VY
Sbjct: 183 NPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVY 225
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 95/230 (41%), Gaps = 24/230 (10%)
Query: 54 GIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED---VDGKKPGVLIP 110
E I + Q +S +D A+ D+ + G + I L E+ G K + P
Sbjct: 142 NTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEP 201
Query: 111 IPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170
I L L ++ + ++ + E W + +E+E+ K + +A++++NP NP
Sbjct: 202 IFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEK-----LKDPSIKALIVVNPTNP 256
Query: 171 TGQVLTKENIQDIIKFAHRE-KLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSME 229
T + + I + + KL + +DEVY G+ +FK + + PY +
Sbjct: 257 TSKEFDTNALNAIKQAVEKNPKLXIISDEVY-------GAFVPNFKSIYSVV--PYNTXL 307
Query: 230 LASF---MSCSKGYMGECGLRGGY---SEVINLDPGVKAMLHKSISAMLC 273
+ S+ C+ +G L + +LD LHK S+++
Sbjct: 308 VYSYSXLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVL 357
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 458 ERTGICIVPGAGFGQVPGTYHFRTTILPQPEKL---KAMLEKFREFHEEF 504
E+ G+ +V G GFG PG LP + K +LE +E++EEF
Sbjct: 480 EKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYEEF 529
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDG-QPADWQDV 79
FD PR+ Q L Q Y G++ +R +AQ R G QP D+
Sbjct: 42 FDGPRY-------LQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDI 94
Query: 80 ILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQW 139
++AGA++ + + + L+ + D V+ P Y Y+ ++A + + + +
Sbjct: 95 TVTAGATEALYAAITALVRNGDE----VICFDPSYDSYAPAIA-LSGGIVKRMALQPPHF 149
Query: 140 GLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199
+ E ++E R +++ P NP+ V + + + + ++F+ +DEV
Sbjct: 150 RVDWQEFAALLSE-----RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEV 204
Query: 200 YQ 201
Y+
Sbjct: 205 YE 206
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 77 QDVILSAGASDGIKSVLKLLI---EDVDGKKPGVLIPIPQYPLYSASLAEFNM---EQIG 130
++V ++ GA++GI S L L+ ++V +P IP L + + +++
Sbjct: 119 ENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELD 178
Query: 131 YYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE 190
++W + + E++IT K A++I P NP G+V T+E + + +
Sbjct: 179 QRNTRGEEWTIDFEQFEKAITSKTK-----AVIINTPHNPIGKVFTREELTTLGNICVKH 233
Query: 191 KLFLFADEVYQ 201
+ + +DEVY+
Sbjct: 234 NVVIISDEVYE 244
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 153/394 (38%), Gaps = 76/394 (19%)
Query: 55 IEIIRRHVAQYISRR---DGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK-KPG--VL 108
+ I + V QYI R D P++ ++ G + + + + + V+G K G V
Sbjct: 141 LNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESM--KVNGLLKAGDKVA 198
Query: 109 IPIPQYPLYSA--SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN 166
I +P + Y LA++ +E++ D + W P SEL++ K + +N
Sbjct: 199 IGMPVFTPYIEIPELAQYALEEVAINADPALNWQYPDSELDK-----LKDPAIKIFFCVN 253
Query: 167 PGNPTGQVLTKENIQDIIKFA--HREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEP 224
P NP + + +++ + K HR L + D+VY +A+G F S + P
Sbjct: 254 PSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVY--GTFADG--FQSLFAIC-----P 304
Query: 225 YKSMELASFMSCSKGYMGECGLRGG----YSEVINLDPGVKAMLHKSISAM------LCP 274
++ + SF Y G G R G + E I D + + +A+ L P
Sbjct: 305 ANTLLVYSF----SKYFGATGWRLGVVAAHKENI-FDLALGRLPESEKTALDDRYRSLLP 359
Query: 275 TVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTV------MDCVVNPPQPGEP 328
V +L L +L D R L+ G S Q V + +++ +
Sbjct: 360 DVRSLKFLDRLVADSR---------AVALNHTAGLSTPQQVQMTLFSLFALMDESDQYKH 410
Query: 329 SYEQFSREKQSV----LDSLKQRAKMVADTFNSIEGMSCNPVQGAMY--AFPQMXXXXXX 382
+ +Q R +++ L + QR + D + I+ V +Y AF +
Sbjct: 411 TLKQLIRRREATLYRELGTPPQRDENAVDYYTLID---LQDVTSKLYGEAFSKWAVKQSS 467
Query: 383 XXXXXXXXXCPSVLYAFELLERTGICIVPGAGFG 416
F + + TGI ++PG GFG
Sbjct: 468 TGDML-----------FRIADETGIVLLPGRGFG 490
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 23/213 (10%)
Query: 34 AQAVLDGCRG---QSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIK 90
A ++D + Q + YT P + + ++ RR + +I S G I
Sbjct: 47 APCIIDSLKNRLEQEIYGYTTRP--DSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAIS 104
Query: 91 SVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD--ESKQWGLPISELER 148
LLI ++ ++I P Y +++ + N E I L E+ + + ++E
Sbjct: 105 ----LLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIEN 160
Query: 149 SITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE- 207
I + + ++ NP NP G+V TK+ ++ + + + + +DE++ D + +
Sbjct: 161 KIKDVK------LFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH 214
Query: 208 -----GSKFYSFKKVLVEMGEPYKSMELASFMS 235
S F+K + P K+ +A S
Sbjct: 215 KHIPMASISKEFEKNTITCMAPTKTFNIAGLQS 247
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDES 136
+ V++S GA +GI+ +++ E K +L P Y +YS S +E +
Sbjct: 76 EQVLVSRGADEGIELLIRAFCEP---GKDAILYCPPTYGMYSVSAETIGVE--CRTVPTL 130
Query: 137 KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196
W L + + + K + + + +P NPTGQ++ ++ + +++ R K + A
Sbjct: 131 DNWQLDLQGI------SDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELT-RGKAIVVA 183
Query: 197 DEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS----E 252
DE Y E S L E P+ LA + SK + GLR G++ E
Sbjct: 184 DE-----AYIEFCPQASLAGWLAEY--PH----LAILRTLSKAF-ALAGLRCGFTLANEE 231
Query: 253 VINL 256
VINL
Sbjct: 232 VINL 235
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 133 LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKL 192
L S W L EL T K A+V+ P NP G+V ++E ++ + + +
Sbjct: 154 LGSSSNWQLDPMELAGKFTSRTK-----ALVLNTPNNPLGKVFSREELELVASLCQQHDV 208
Query: 193 FLFADEVYQDNVY 205
DEVYQ VY
Sbjct: 209 VCITDEVYQWMVY 221
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 133 LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKL 192
L S W L EL T K A+V+ P NP G+V ++E ++ + + +
Sbjct: 154 LGSSSNWQLDPMELAGKFTSRTK-----ALVLNTPNNPLGKVFSREELELVASLCQQHDV 208
Query: 193 FLFADEVYQDNVY 205
DEVYQ VY
Sbjct: 209 VCITDEVYQWMVY 221
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 133 LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKL 192
L S W L EL T K A+V+ P NP G+V ++E ++ + + +
Sbjct: 154 LGSSSNWQLDPMELAGKFTSRTK-----ALVLNTPNNPLGKVFSREELELVASLCQQHDV 208
Query: 193 FLFADEVYQDNVY 205
DEVYQ VY
Sbjct: 209 VCITDEVYQWMVY 221
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Query: 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK- 137
++L GAS+ I+ + L +LI +P Y Y + + + + YLDE+
Sbjct: 81 IVLGNGASEIIELSISLF--------EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMC 132
Query: 138 -QWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196
+ IS+++ + +++I NP NP G ++ KE ++K A +K +
Sbjct: 133 IDYEDIISKID----------DVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIII 182
Query: 197 DEVY 200
DE +
Sbjct: 183 DEAF 186
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 38/207 (18%)
Query: 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP-QYPLYSASLAEFN------- 125
DW +I +AG + + ++ + DG V+I P YP + A +
Sbjct: 89 TDW--IINTAGVVPAVFNAVREFTKPGDG----VIIITPVYYPFFMAIKNQERKIIECEL 142
Query: 126 MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185
+E+ GYY + +LE+ K N +A++ +P NP G+V K+ +Q I
Sbjct: 143 LEKDGYY-------TIDFQKLEK----LSKDKNNKALLFCSPHNPVGRVWKKDELQKIKD 191
Query: 186 FAHREKLFLFADEVYQDNVY--AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGE 243
+ L L++DE++ D + E + F S + L + + +F + SK +
Sbjct: 192 IVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLAD--------KTITFTAPSKTF-NI 242
Query: 244 CGLRGGYSEVINLDPGVKAMLHKSISA 270
G+ G S +I +P ++ KS A
Sbjct: 243 AGM--GMSNIIIKNPDIRERFTKSRDA 267
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 56/160 (35%), Gaps = 23/160 (14%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108
Y G +R VA G+ AD ++ +S G+ I + + G KP V
Sbjct: 107 YGAEQGQGALREAVASTFYGHAGRAAD--EIFISDGSKCDIARIQMMF-----GSKPTVA 159
Query: 109 IPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPR-------- 160
+ P YP+Y + M G +E + H P
Sbjct: 160 VQDPSYPVYVDTSVMMGMT--------GDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTD 211
Query: 161 AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200
I +P NPTG T+ + +++ FA + L D Y
Sbjct: 212 IIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAY 251
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 55 IEIIRRHVAQYISRR---DGQPADWQDVILSAGASDGIKSV---LKLLIEDVDGKKPGVL 108
+ I + V QYI R D P++ ++ G + + + LKL G K +
Sbjct: 141 LNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIG 200
Query: 109 IPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168
+P+ + LA++ +E++ D S W P SEL++ K + +NP
Sbjct: 201 MPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDK-----LKDPAIKIFFCVNPS 255
Query: 169 NPTGQVLTKENIQDI--IKFAHREKLFLFADEVY 200
NP + + +++ + I HR L + D+VY
Sbjct: 256 NPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 55 IEIIRRHVAQYISRR---DGQPADWQDVILSAGASDGIKSV---LKLLIEDVDGKKPGVL 108
+ I + V QYI R D P++ ++ G + + + LKL G K +
Sbjct: 141 LNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIG 200
Query: 109 IPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168
+P+ + LA++ +E++ D S W P SEL++ K + +NP
Sbjct: 201 MPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDK-----LKDPAIKIFFCVNPS 255
Query: 169 NPTGQVLTKENIQDI--IKFAHREKLFLFADEVY 200
NP + + +++ + I HR L + D+VY
Sbjct: 256 NPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDES 136
+ V++S GA +GI+ +++ E K +L P Y YS S +E +
Sbjct: 76 EQVLVSRGADEGIELLIRAFCEP---GKDAILYCPPTYGXYSVSAETIGVE--CRTVPTL 130
Query: 137 KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196
W L + + + K + + + +P NPTGQ++ ++ + +++ R K + A
Sbjct: 131 DNWQLDLQGI------SDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELT-RGKAIVVA 183
Query: 197 DEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS----E 252
DE Y E S L E P+ LA + SK + GLR G++ E
Sbjct: 184 DE-----AYIEFCPQASLAGWLAEY--PH----LAILRTLSKAF-ALAGLRCGFTLANEE 231
Query: 253 VINL 256
VINL
Sbjct: 232 VINL 235
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 136 SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195
S W ELE + K AI++ P NP G+V T++ +Q I +
Sbjct: 150 SSDWTFDPRELESKFSSKTK-----AIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204
Query: 196 ADEVYQDNVYA 206
+DEVY+ VY
Sbjct: 205 SDEVYEWLVYT 215
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 136 SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195
S W ELE + K AI++ P NP G+V T++ +Q I +
Sbjct: 150 SSDWTFDPRELESKFSSKTK-----AIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204
Query: 196 ADEVYQDNVYA 206
+DEVY+ VY
Sbjct: 205 SDEVYEWLVYT 215
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108
Y + G +R + +++ +R G D D+++++G+ + + ++ + PG +
Sbjct: 69 YGTTKGFTPLRETLMKWLGKRYGISQD-NDIMITSGSQQALDLIGRVFL------NPGDI 121
Query: 109 IPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168
+ + + P Y A+L FN + Y G+ + LE + E + +V P
Sbjct: 122 VVV-EAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPT 180
Query: 169 --NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYA 206
NP G + ++ + +++ A + D+ Y + Y+
Sbjct: 181 FQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYS 220
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108
Y + G +R + +++ +R G D D+++++G+ + + ++ + PG +
Sbjct: 114 YGTTKGFTPLRETLMKWLGKRYGISQD-NDIMITSGSQQALDLIGRVFL------NPGDI 166
Query: 109 IPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168
+ + + P Y A+L FN + Y G+ + LE + E + +V P
Sbjct: 167 VVV-EAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPT 225
Query: 169 --NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYA 206
NP G + ++ + +++ A + D+ Y + Y+
Sbjct: 226 FQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYS 265
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 71/183 (38%), Gaps = 20/183 (10%)
Query: 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI 80
F+ P+F D + S+ Y S E +R + RR ++I
Sbjct: 35 FETPKFIQDALKN--------HTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELI 86
Query: 81 LSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWG 140
+ G+ + + + ++ D + P + P P Y +Y + + + L + +
Sbjct: 87 STLGSREVLFNFPSFVL--FDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLXPLTKENDFT 144
Query: 141 LPISELERSITEARKHCNPRAIVIIN-PGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199
++E K +VI+N P NPTG+ L+ E + +K A + L DE
Sbjct: 145 PSLNE---------KELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDEC 195
Query: 200 YQD 202
Y +
Sbjct: 196 YSE 198
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 96 LIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD-ESKQWGLPISELERSITEAR 154
LI GV+I P Y + ++ + L+ ++ W + +LE + A+
Sbjct: 103 LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVL--AK 160
Query: 155 KHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207
C + +++ +P NPTG+V T + ++ + R + + +DE++ D V+ E
Sbjct: 161 PEC--KIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGE 211
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 86 SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQ-IGYYLDESKQWGLPIS 144
S GI L I+ + VL+ P YP + + N + + ++ + +
Sbjct: 88 SAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQNDTYAIDFE 147
Query: 145 ELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204
LE+ + K ++ +P NP G+V KE + + + + + ADE++ D +
Sbjct: 148 HLEKQFQQGVK-----LXLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDII 202
Query: 205 YAEGS 209
YA+ +
Sbjct: 203 YADHT 207
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 29/207 (14%)
Query: 61 HVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG-VLIPIPQYPLYSA 119
H+ Q ++R PA W ++ G ++ I +V G KP +I P + Y
Sbjct: 63 HLHQALARHHQVPASW--ILAGNGETESIFTV-------ASGLKPRRAMIVTPGFAEYGR 113
Query: 120 SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179
+LA+ E + L E+ W L + LE ++T + + + P NPTG + +
Sbjct: 114 ALAQSGCEIRRWSLREADGWQLTDAILE-ALTP-----DLDCLFLCTPNNPTGLLPERPL 167
Query: 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239
+Q I + L DE + D + E F L + + L F +
Sbjct: 168 LQAIADRCKSLNINLILDEAFIDFIPHET----GFIPALKDNPHIWVLRSLTKFYAIP-- 221
Query: 240 YMGECGLRGGYSEVINLDPGVKAMLHK 266
GLR GY ++N D A + +
Sbjct: 222 -----GLRLGY--LVNSDDAAMARMRR 241
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 136 SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195
S W L +ELE E K I+I P NP G+V+ + ++ + + +
Sbjct: 165 SADWVLDNNELEALFNEKTK-----MIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCV 219
Query: 196 ADEVYQDNVY 205
+DEVY+ V+
Sbjct: 220 SDEVYEHMVF 229
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 136 SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195
S W L +ELE E K I+I P NP G+V+ + ++ + + +
Sbjct: 165 SADWVLDNNELEALFNEKTK-----MIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCV 219
Query: 196 ADEVYQDNVY 205
+DEVY+ V+
Sbjct: 220 SDEVYEHMVF 229
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 32/214 (14%)
Query: 41 CRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV 100
CRG Y G+ +R+ +++ R D +++ +S GA + +L
Sbjct: 68 CRG-----YGPDFGLPALRQKLSEDFYR---GFVDAKEIFISDGAKVDLFRLLSFF---- 115
Query: 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPR 160
G V I P YP Y I + LP + E + +
Sbjct: 116 -GPNQTVAIQDPSYPAYL---------DIARLTGAKEIIALPCLQENAFFPEFPEDTHID 165
Query: 161 AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVE 220
+ + +P NPTG VL K+ ++ I+ +A ++ + D Y + S K + E
Sbjct: 166 ILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDP-----SLPKSIFE 220
Query: 221 MGEP-YKSMELASFMSCSKGYMGECGLRGGYSEV 253
+ + + ++E+ SF +G G+R G++ +
Sbjct: 221 IPDARFCAIEINSFSKP----LGFAGIRLGWTVI 250
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPA-DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGV 107
Y+ + G ++++ + + + R G D ++I + G+ + + KL ++D
Sbjct: 81 YSTTEGDPVLKQQILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDES------ 134
Query: 108 LIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAI----V 163
+ P Y ++ F + + + G ++ LER ++E K+ + + V
Sbjct: 135 -YCVLDDPAYLGAINAFRQYLANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYV 193
Query: 164 IINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200
+ N NP G + E + +++ A + LF+ D+ Y
Sbjct: 194 VSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPY 230
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 40/190 (21%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK 137
DV +S GA I S L+++ G + + P YP Y S M Q G + + +
Sbjct: 121 DVFVSDGAKCDI-SRLQVMF----GSNVTIAVQDPSYPAYVDS--SVIMGQTGQFNTDVQ 173
Query: 138 QWGLPISELERSITEARKHCNPRA--------------IVIINPGNPTGQVLTKENIQDI 183
++G +I R C P I +P NPTG T+E + +
Sbjct: 174 KYG--------NIEYMR--CTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQL 223
Query: 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGE 243
++FA + + D Y +Y S ++ G +ME ASF Y G
Sbjct: 224 VEFAKKNGSIIVYDSAYA--MYMSDDNPRSIFEI---PGAEEVAMETASF----SNYAGF 274
Query: 244 CGLRGGYSEV 253
G+R G++ +
Sbjct: 275 TGVRLGWTVI 284
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 18/88 (20%)
Query: 162 IVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEM 221
+V+ NP NPTGQ L+ + + + A + L DE Y D + SF+
Sbjct: 139 VVLANPSNPTGQALSAGELDQLRQRAGK----LLIDETYVD--------YSSFRA----R 182
Query: 222 GEPYKSMELASFMSCSKGYMGECGLRGG 249
G Y EL F S SK Y G GLR G
Sbjct: 183 GLAYGENELV-FRSFSKSY-GLAGLRLG 208
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 160 RAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSF----- 214
R V NP NP G ++E ++ I + + ++ L +DE++ D V + +F
Sbjct: 162 RXXVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWD 221
Query: 215 -KKVLVEMGEPYKSMELASFMSC 236
K +V + P + LA+ +
Sbjct: 222 AKNWVVSLISPSXTFNLAALHAA 244
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 39/226 (17%)
Query: 36 AVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL 95
+ ++G RG Y G + +R+ +A+ R ++ +V +S GA I S L+L
Sbjct: 100 STVEGYRG-----YGLEQGNKTLRKAIAETFYRDLHVKSN--EVFVSDGAQSDI-SRLQL 151
Query: 96 LIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWG----LPISELERSIT 151
L+ G + + P +P Y S + Q G++ +++K++ +P
Sbjct: 152 LL----GSNVTIAVQDPTFPAYIDS--SVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFP 205
Query: 152 EARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211
+ I +P NPTG V +++ + ++ FA + D Y
Sbjct: 206 DLAMTPRTDVIFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYA---------- 255
Query: 212 YSFKKVLVEMGEPYK------SMELASFMSCSKGYMGECGLRGGYS 251
+E G P + E+A +S + G G+R G+S
Sbjct: 256 -----AFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWS 296
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 40/190 (21%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK 137
DV +S GA I S L+++ G + + P YP Y S M Q G + + +
Sbjct: 121 DVFVSDGAKCDI-SRLQVMF----GSNVTIAVQDPSYPAYVDS--SVIMGQTGQFNTDVQ 173
Query: 138 QWGLPISELERSITEARKHCNPRA--------------IVIINPGNPTGQVLTKENIQDI 183
++G +I R C P I +P NPTG T+E + +
Sbjct: 174 KYG--------NIEYMR--CTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQL 223
Query: 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGE 243
++FA + + D Y +Y S ++ G +ME ASF Y G
Sbjct: 224 VEFAKKNGSIIVYDSAYA--MYMSDDNPRSIFEI---PGAEEVAMETASFSQ----YAGF 274
Query: 244 CGLRGGYSEV 253
G+R G++ +
Sbjct: 275 TGVRLGWTVI 284
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 40/190 (21%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK 137
DV +S GA I S L+++ G + + P YP Y S M Q G + + +
Sbjct: 121 DVFVSDGAKCDI-SRLQVMF----GSNVTIAVQDPSYPAYVDS--SVIMGQTGQFNTDVQ 173
Query: 138 QWGLPISELERSITEARKHCNPRA--------------IVIINPGNPTGQVLTKENIQDI 183
++G +I R C P I +P NPTG T+E + +
Sbjct: 174 KYG--------NIEYMR--CTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQL 223
Query: 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGE 243
++FA + + D Y +Y S ++ G +ME ASF Y G
Sbjct: 224 VEFAKKNGSIIVYDSAYA--MYMSDDNPRSIFEI---PGAEEVAMETASFSK----YAGF 274
Query: 244 CGLRGGYSEV 253
G+R G++ +
Sbjct: 275 TGVRLGWTVI 284
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS------ASL-AEFNMEQI 129
+ ++ + GA+ VL LIE PG + I YP Y SL AE ++ QI
Sbjct: 82 EQILQTNGATGANLLVLYSLIE------PGDHV-ISLYPTYQQLYDIPKSLGAEVDLWQI 134
Query: 130 GYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR 189
+E W + +L + I K I I N NPTG V + ++++++ A
Sbjct: 135 ----EEENGWLPDLEKLRQLIRPTTK-----XICINNANNPTGAVXDRTYLEELVEIASE 185
Query: 190 EKLFLFADEVYQ 201
++ +DEVY+
Sbjct: 186 VGAYILSDEVYR 197
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 162 IVIIN-PGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGS-----KFYSFK 215
++++N P NPTG V ++ + A + L+L D Y D VY EG K
Sbjct: 161 VLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVY-EGEAPSPLALPGAK 219
Query: 216 KVLVEMGEPYKSMELASF 233
+ +VE+ KS LA F
Sbjct: 220 ERVVELFSLSKSYNLAGF 237
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYP--LYSASLAEFNMEQIGYYLDES 136
++L+AG+S+GI++ IE + ++IP Y + A +A + ++ LD
Sbjct: 71 ILLTAGSSEGIRAA----IEAYASLEAQLVIPELTYGDGEHFAKIAGXKVTKVKX-LD-- 123
Query: 137 KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196
W I L+ ++ + P + ++NP NPTG + + I+ I F+
Sbjct: 124 -NWAFDIEGLKAAVA---AYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTXFIV- 178
Query: 197 DEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251
DE Y + + +F S + + E + L +F G R GY+
Sbjct: 179 DEAYAE--FVNDPRFRSISPXITQGAE--NIILLKTFSKI----HAXAGXRVGYA 225
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 17/123 (13%)
Query: 87 DGIKSVLKLLIEDVDGKKPGVLIPIPQY-------PLYSASLAEFNMEQIGYYLDESKQW 139
DG+ + + ++ K VLI P Y L L E +++ I + ++
Sbjct: 126 DGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQII------NGRF 179
Query: 140 GLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199
+ +LE+ I + N + ++ +P NP G+V +++ I + + + L +DE+
Sbjct: 180 EIDFEQLEKDIID----NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEI 235
Query: 200 YQD 202
+QD
Sbjct: 236 HQD 238
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
Query: 77 QDVILSAGASDGIKSVLKLLI-EDVDGKKPGVLIPI-PQYPLYSASLAEFNMEQIGYYLD 134
Q++ L+ G+ + L DG VL P+ P+Y Y+ S E ++ +
Sbjct: 99 QNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDL----FVSA 154
Query: 135 ESKQWGLPISELERSITEARKHCNPRA--IVIINPGNPTGQVLTKENIQDIIKFAHREKL 192
LP + + + H I + P NPTG V+T E + + + A++ +
Sbjct: 155 RPNIELLPEGQFKYHVDFEHLHIGEETGXICVSRPTNPTGNVITDEELXKLDRLANQHNI 214
Query: 193 FLFADEVY 200
L D Y
Sbjct: 215 PLVIDNAY 222
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 16/155 (10%)
Query: 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108
YT + G+ +R+ +A+ G D V+++ G+S G L + D V
Sbjct: 64 YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDR----VG 119
Query: 109 IPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELER--SITEARKHCNPRAIVIIN 166
I P YP Y L + + LP + R + + + + +
Sbjct: 120 IGAPGYPSYRQILRALGLVPVD----------LPTAPENRLQPVPADFAGLDLAGLXVAS 169
Query: 167 PGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201
P NPTG L +I+ A + +DE+Y
Sbjct: 170 PANPTGTXLDHAAXGALIEAAQAQGASFISDEIYH 204
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK 137
D+ +++G+ G+ V +++I D VL+ P Y SL I DES
Sbjct: 110 DLCVTSGSQQGLXKVFEMIINPGDN----VLLDEPAYSGTLQSLHPLGCNIINVASDES- 164
Query: 138 QWGLPISELERSITEAR-------KHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHR 189
G+ L ++ + + P+ + + N NPTG LT E ++I + A +
Sbjct: 165 --GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 222
Query: 190 EKLFLFADEVY 200
+ D+ Y
Sbjct: 223 YDFLIIEDDPY 233
>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|B Chain B, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|C Chain C, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|D Chain D, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|E Chain E, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|F Chain F, Tyrosine Aminotransferase From E. Coli
Length = 397
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 104 KPGVLIPIPQYPLYSASLAEFNMEQIGY-YLDESKQWGLPISELERSITEARKHCNPRAI 162
+ GV + P + + A A E Y + DE+ G+ ++L ++ K R+I
Sbjct: 121 ESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATN-GVRFNDLLATL----KTLPARSI 175
Query: 163 VIINP--GNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201
V+++P NPTG LT + +I+ +L F D YQ
Sbjct: 176 VLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQ 216
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 80 ILSAGASDGIKSVLKLLIEDVDGKKPG--VLIPIPQYPLYSASLAEFNMEQIGYYL--DE 135
+L SD I S L L +PG V P+P + Y+ S +E +G L D
Sbjct: 88 VLLGNGSDEIISXLALA-----AARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLRADF 142
Query: 136 SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE--KLF 193
+ G ++ A P + + P NPTG + + + I++ A +
Sbjct: 143 TLDRGAXLA--------AXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSL 194
Query: 194 LFADEVYQDNVYAE---GSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250
+ DE YQ +A+ S+ F +LV + SK +G G+R GY
Sbjct: 195 VVVDEAYQP--FAQESWXSRLTDFGNLLVX-------------RTVSK--LGLAGIRLGY 237
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 162 IVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEM 221
I +P NPTG T+E + +++FA + + VY D+ YA + + +
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSII----VY-DSAYAXYXSDDNPRSIFEIP 256
Query: 222 GEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253
G + E ASF Y G G+R G++ +
Sbjct: 257 GAEEVAXETASFSK----YAGFTGVRLGWTVI 284
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK 137
D+ +++G+ G+ V +++I D VL+ P Y SL I DES
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDN----VLLDEPAYSGTLQSLHPLGCNIINVASDES- 164
Query: 138 QWGLPISELERSITEAR-------KHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHR 189
G+ L ++ + + P+ + + N NPTG LT E ++I + A +
Sbjct: 165 --GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 222
Query: 190 EKLFLFADEVY 200
+ D+ Y
Sbjct: 223 YDFLIIEDDPY 233
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK 137
D+ +++G+ G+ V +++I D VL+ P Y SL I DES
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDN----VLLDEPAYSGTLQSLHPLGCNIINVASDES- 164
Query: 138 QWGLPISELERSITEAR-------KHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHR 189
G+ L ++ + + P+ + + N NPTG LT E ++I + A +
Sbjct: 165 --GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 222
Query: 190 EKLFLFADEVY 200
+ D+ Y
Sbjct: 223 YDFLIIEDDPY 233
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK 137
D+ +++G+ G+ V +++I D VL+ P Y SL I DES
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDN----VLLDEPAYSGTLQSLHPLGCNIINVASDES- 164
Query: 138 QWGLPISELERSITEAR-------KHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHR 189
G+ L ++ + + P+ + + N NPTG LT E ++I + A +
Sbjct: 165 --GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 222
Query: 190 EKLFLFADEVY 200
+ D+ Y
Sbjct: 223 YDFLIIEDDPY 233
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK 137
D+ +++G+ G+ V +++I D VL+ P Y SL I DES
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDN----VLLDEPAYSGTLQSLHPLGCNIINVASDES- 164
Query: 138 QWGLPISELERSITEAR-------KHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHR 189
G+ L ++ + + P+ + + N NPTG LT E ++I + A +
Sbjct: 165 --GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 222
Query: 190 EKLFLFADEVY 200
+ D+ Y
Sbjct: 223 YDFLIIEDDPY 233
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK 137
D+ +++G+ G+ V +++I D VL+ P Y SL I DES
Sbjct: 110 DLCVTSGSQQGLCKVFEMIINPGDN----VLLDEPAYSGTLQSLHPLGCNIINVASDES- 164
Query: 138 QWGLPISELERSITEAR-------KHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHR 189
G+ L ++ + + P+ + + N NPTG LT E ++I + A +
Sbjct: 165 --GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 222
Query: 190 EKLFLFADEVY 200
+ D+ Y
Sbjct: 223 YDFLIIEDDPY 233
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 43/236 (18%)
Query: 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQD-VILSAGA 85
P + Q L Q G++ G E ++ + + R+ D +D V + G
Sbjct: 62 PQGIIDHFQKALTIPENQKYGAFH---GKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGT 118
Query: 86 SDGIKSVLKLLIEDVDGKKPG--VLIPIPQYPLYSAS--LAE-----FNMEQIGYYLDES 136
+G+ +V +I PG VL+P P Y Y A LA+ N+E Y D
Sbjct: 119 KNGLVAVPTCVI------NPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPD-- 170
Query: 137 KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQD-IIKFAHREKLFLF 195
W S+++ I + K I + P NPTG TKE + I KF +
Sbjct: 171 --W----SKVDSQIIDKTK-----LIYLTYPNNPTGSTATKEVFDEAIAKFKGTDT---- 215
Query: 196 ADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251
++ D +A G+ + K + E K + + + S SKGY G R G++
Sbjct: 216 --KIVHD--FAYGAFGFDAKNPSILASENGKDVAIEIY-SLSKGY-NXSGFRVGFA 265
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK 137
D+ +++G+ G+ V +++I D VL+ P Y SL I DES
Sbjct: 112 DLCVTSGSQQGLCKVFEMIINPGDN----VLLDEPAYSGTLQSLHPLGCNIINVASDES- 166
Query: 138 QWGLPISELERSITEAR-------KHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHR 189
G+ L ++ + + P+ + + N NPTG LT E ++I + A +
Sbjct: 167 --GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 224
Query: 190 EKLFLFADEVY 200
+ D+ Y
Sbjct: 225 YDFLIIEDDPY 235
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 161 AIVIINPGNPTGQVLTKENIQDIIK----FAHREKLFLFADEVYQD 202
+ I NP NPTG V +E I+ I+K A E + F E Y D
Sbjct: 141 VVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVD 186
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 161 AIVIINPGNPTGQVLTKENIQDIIK----FAHREKLFLFADEVYQD 202
+ I NP NPTG V +E I+ I+K A E + F E Y D
Sbjct: 153 VVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVD 198
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 161 AIVIINPGNPTGQVLTKENIQDIIK----FAHREKLFLFADEVYQD 202
+ I NP NPTG V +E I+ I+K A E + F E Y D
Sbjct: 141 VVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVD 186
>pdb|2ZKR|AA Chain a, Structure Of A Mammalian Ribosomal 60s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
Length = 257
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 148 RSITEARKHCNPRAIV---IINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204
R++ A +H + IV I +PG G L K +D +F R +LF+ A+ ++
Sbjct: 30 RAVDFAERHGYIKGIVKDIIHDPGR--GAPLAKVVFRDPYRFKKRTELFIAAEGIHT--- 84
Query: 205 YAEGSKFYSFKKVLVEMGE--PYKSMELASFMSCSKGYMGECG----LRGGYSEVINLDP 258
G Y KK + +G P +M + + C + G+ G G Y+ VI+ +P
Sbjct: 85 ---GQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 259 GVK 261
K
Sbjct: 142 ETK 144
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 58 IRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY 117
+R +A YI+++ G ++ A++G +L+ L++ G L P Y ++
Sbjct: 74 LRDELAAYITKQTGVAVTRDNL----WAANGSNEILQQLLQAFGGPGRTALGFQPSYSMH 129
Query: 118 SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177
+ E I S+ I +++ ++ E R P + + P NPTG V +
Sbjct: 130 PILAKGTHTEFIAV----SRGADFRI-DMDVALEEIRAK-QPDIVFVTTPNNPTGDVTSL 183
Query: 178 ENIQDIIKFA 187
++++ II A
Sbjct: 184 DDVERIINVA 193
>pdb|3OQ2|A Chain A, Structure Of A Crispr Associated Protein Cas2 From
Desulfovibrio Vulgaris
pdb|3OQ2|B Chain B, Structure Of A Crispr Associated Protein Cas2 From
Desulfovibrio Vulgaris
Length = 103
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 275 TVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFS 334
+L L+S F+DP +++ A+A D GQ V +V +CVV+P Q + + S
Sbjct: 7 AMLVLISYDVSFEDPGGQRRLRRIAKACQD--YGQRVQYSVFECVVDPAQWAKLKHRLLS 64
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 58 IRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY 117
+R +A YI+++ G ++ A++G +L+ L++ G L P Y ++
Sbjct: 74 LRDELAAYITKQTGVAVTRDNL----WAANGSNEILQQLLQAFGGPGRTALGFQPSYSMH 129
Query: 118 SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177
+ E I S+ I +++ ++ E R P + + P NPTG V +
Sbjct: 130 PILAKGTHTEFIAV----SRGADFRI-DMDVALEEIRAK-QPDIVFVTTPNNPTGDVTSL 183
Query: 178 ENIQDIIKFA 187
++++ II A
Sbjct: 184 DDVERIINVA 193
>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3PD6|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN 166
V +P P + ++ + M+ GY + K G S I++ + +++++++
Sbjct: 126 VFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPE----QSVLLLH 181
Query: 167 P--GNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMG 222
NPTG E ++I ++ LF F D YQ +G K + +E G
Sbjct: 182 ACAHNPTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQG 239
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 129/342 (37%), Gaps = 72/342 (21%)
Query: 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRA 161
G K + +P+ + LA+++++++ + D W +EL++ K + +
Sbjct: 193 GDKVAIGMPVFTPYIEIPELAQYDLKEVPIHADPDNGWQYSDAELDK-----LKDPDVKI 247
Query: 162 IVIINPGNPTGQVLTKENIQDI--IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLV 219
+NP NP + + ++ + I R L + D+VY +A+ +F S V
Sbjct: 248 FFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVY--GTFAD--EFQSLFSVC- 302
Query: 220 EMGEPYKSMELASFMSCSKGYMGECGLRGG---------YSEVINLDP--GVKAMLHKSI 268
P ++ + SF Y G G R G + ++ P KA+ H+
Sbjct: 303 ----PRNTLLVYSF----SKYFGATGWRLGVIAAHKDNVFDHALSQLPESAKKALDHRYR 354
Query: 269 SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTV------MDCVVNP 322
S L P V +L + +L D R L+ G S Q V + +++
Sbjct: 355 S--LLPDVRSLKFIDRLVADSRV---------VALNHTAGLSTPQQVQMVLFSLFALMDE 403
Query: 323 PQPGEPSYEQFSREKQSVLDS------LKQRAKMVADTFNSIEGMSCNPVQGAMY--AFP 374
+ + +Q R +++ L L+ + T ++ ++C +Y AF
Sbjct: 404 ADAYKQALKQLIRRREATLYRELGMPPLENPNSVNYYTLIDLQNVTCR-----LYGEAFS 458
Query: 375 QMXXXXXXXXXXXXXXXCPSVLYAFELLERTGICIVPGAGFG 416
Q F + + TGI ++PG GFG
Sbjct: 459 QWAVQQSSTGDML-----------FRVADETGIVLLPGRGFG 489
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 58 IRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY 117
+R +A YI+++ G ++ A++G +L+ L++ G L P Y ++
Sbjct: 71 LRDELAAYITKQTGVAVTRDNL----WAANGSNEILQQLLQAFGGPGRTALGFQPSYSMH 126
Query: 118 SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177
+ E I S+ I +++ ++ E R P + + P NPTG V +
Sbjct: 127 PILAKGTHTEFIAV----SRGADFRI-DMDVALEEIRAK-QPDIVFVTTPNNPTGDVTSL 180
Query: 178 ENIQDIIKFA 187
++++ II A
Sbjct: 181 DDVERIINVA 190
>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN 166
V +P P + ++ + M+ GY + K G S I++ + +++++++
Sbjct: 126 VFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPE----QSVLLLH 181
Query: 167 P--GNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMG 222
NPTG E ++I ++ LF F D YQ +G K + +E G
Sbjct: 182 ACAHNPTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQG 239
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 161 AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200
AI P NPTG VLT E + + A R + L D Y
Sbjct: 209 AICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAY 248
>pdb|2JGB|A Chain A, Structure Of Human Eif4e Homologous Protein 4ehp With
M7gtp
pdb|2JGC|A Chain A, Structure Of The Human Eif4e Homologous Protein, 4ehp
Without Ligand Bound
Length = 195
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 166 NPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGE 223
PG PT ++NI+ I FA E+ + F + + S F+ FK+ + M E
Sbjct: 29 TPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWE 86
>pdb|3PCO|B Chain B, Crystal Structure Of E. Coli Phenylalanine-Trna Synthetase
Complexed With Phenylalanine And Amp
pdb|3PCO|D Chain D, Crystal Structure Of E. Coli Phenylalanine-Trna Synthetase
Complexed With Phenylalanine And Amp
Length = 795
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 249 GYSEVIN---LDPGVKAMLHKSISAMLCPT 275
GY EVI +DP V+ M+H + A+L P+
Sbjct: 506 GYQEVITYSFVDPKVQQMIHPGVEALLLPS 535
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 161 AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200
+I+ NP NPT Q T E ++ I + A + + + D Y
Sbjct: 185 SIIYSNPNNPTWQCXTDEELRIIGELATKHDVIVIEDLAY 224
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,012,639
Number of Sequences: 62578
Number of extensions: 627916
Number of successful extensions: 1593
Number of sequences better than 100.0: 96
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1471
Number of HSP's gapped (non-prelim): 142
length of query: 509
length of database: 14,973,337
effective HSP length: 103
effective length of query: 406
effective length of database: 8,527,803
effective search space: 3462288018
effective search space used: 3462288018
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)