Query psy13922
Match_columns 509
No_of_seqs 159 out of 2193
Neff 8.5
Searched_HMMs 46136
Date Fri Aug 16 23:55:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13922.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13922hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02231 alanine transaminase 100.0 3.2E-56 6.9E-61 474.8 48.5 413 4-509 115-533 (534)
2 KOG0258|consensus 100.0 9.5E-55 2.1E-59 419.2 39.3 411 3-509 64-475 (475)
3 PTZ00377 alanine aminotransfer 100.0 1.6E-53 3.6E-58 452.8 46.7 412 4-509 63-481 (481)
4 COG0436 Aspartate/tyrosine/aro 100.0 1.1E-53 2.3E-58 439.9 38.9 351 21-504 35-392 (393)
5 PLN00175 aminotransferase fami 100.0 2.6E-47 5.7E-52 397.6 38.7 363 6-502 42-412 (413)
6 PRK07366 succinyldiaminopimela 100.0 1.4E-47 3E-52 397.5 36.3 345 22-501 38-388 (388)
7 PLN00145 tyrosine/nicotianamin 100.0 3.7E-47 8E-52 398.1 39.0 351 27-507 71-428 (430)
8 PLN02187 rooty/superroot1 100.0 5.2E-47 1.1E-51 399.7 39.8 351 27-508 85-443 (462)
9 PLN00143 tyrosine/nicotianamin 100.0 5.4E-47 1.2E-51 395.1 39.0 370 7-507 21-408 (409)
10 PRK13355 bifunctional HTH-doma 100.0 3.2E-47 7E-52 407.8 37.9 354 22-505 154-516 (517)
11 KOG0259|consensus 100.0 1.2E-46 2.5E-51 362.9 36.1 351 27-506 80-436 (447)
12 PRK06855 aminotransferase; Val 100.0 2.3E-46 5.1E-51 392.8 41.4 366 21-505 39-431 (433)
13 PRK06207 aspartate aminotransf 100.0 1.6E-46 3.5E-51 391.1 39.7 345 27-505 55-404 (405)
14 COG1168 MalY Bifunctional PLP- 100.0 1.1E-46 2.5E-51 366.1 35.3 350 20-503 31-386 (388)
15 KOG0257|consensus 100.0 7E-48 1.5E-52 378.1 25.3 365 22-498 39-414 (420)
16 PTZ00433 tyrosine aminotransfe 100.0 2.7E-46 5.8E-51 390.6 38.2 374 3-505 18-410 (412)
17 PRK06348 aspartate aminotransf 100.0 3.7E-46 7.9E-51 386.2 38.8 358 7-500 17-382 (384)
18 PLN02656 tyrosine transaminase 100.0 5E-46 1.1E-50 388.0 39.7 356 22-506 39-406 (409)
19 PRK07681 aspartate aminotransf 100.0 5.2E-46 1.1E-50 386.9 37.9 342 22-500 40-385 (399)
20 PLN02368 alanine transaminase 100.0 9.6E-46 2.1E-50 383.2 38.8 341 5-384 56-403 (407)
21 PRK08636 aspartate aminotransf 100.0 1E-45 2.2E-50 385.2 39.0 355 22-504 41-401 (403)
22 PRK09147 succinyldiaminopimela 100.0 1.2E-45 2.7E-50 383.8 39.0 351 22-502 37-395 (396)
23 PRK08068 transaminase; Reviewe 100.0 1.2E-45 2.5E-50 383.1 37.1 342 22-500 40-386 (389)
24 PRK08960 hypothetical protein; 100.0 2.1E-45 4.5E-50 381.0 38.0 343 22-502 40-386 (387)
25 PRK07682 hypothetical protein; 100.0 1.3E-45 2.8E-50 381.5 36.2 361 7-504 8-377 (378)
26 PRK09276 LL-diaminopimelate am 100.0 1.4E-45 3E-50 382.1 36.4 342 22-499 39-384 (385)
27 TIGR03540 DapC_direct LL-diami 100.0 2E-45 4.4E-50 380.6 36.7 342 22-499 37-382 (383)
28 PLN02607 1-aminocyclopropane-1 100.0 3.8E-45 8.3E-50 383.4 38.9 350 45-507 87-441 (447)
29 PRK06108 aspartate aminotransf 100.0 5.8E-45 1.2E-49 377.0 38.9 362 6-502 11-381 (382)
30 TIGR03538 DapC_gpp succinyldia 100.0 6.9E-45 1.5E-49 377.8 38.3 351 22-500 36-392 (393)
31 PLN02376 1-aminocyclopropane-1 100.0 5.4E-45 1.2E-49 386.5 38.0 348 46-505 87-440 (496)
32 PRK05942 aspartate aminotransf 100.0 5.1E-45 1.1E-49 378.9 37.1 344 22-501 43-390 (394)
33 PRK06107 aspartate aminotransf 100.0 7.3E-45 1.6E-49 378.6 37.2 356 22-504 41-401 (402)
34 PRK07324 transaminase; Validat 100.0 7.6E-45 1.6E-49 374.6 35.6 335 22-504 34-371 (373)
35 PRK08361 aspartate aminotransf 100.0 1.4E-44 3E-49 375.3 37.6 347 22-503 41-390 (391)
36 PRK09148 aminotransferase; Val 100.0 1.5E-44 3.4E-49 376.3 38.1 352 22-506 38-393 (405)
37 PLN02450 1-aminocyclopropane-1 100.0 1.5E-44 3.3E-49 381.6 38.3 348 45-505 78-432 (468)
38 TIGR01264 tyr_amTase_E tyrosin 100.0 1.4E-44 2.9E-49 376.6 36.9 345 27-503 50-399 (401)
39 PRK12414 putative aminotransfe 100.0 1.4E-44 3E-49 374.3 36.6 343 22-499 37-383 (384)
40 PRK08912 hypothetical protein; 100.0 2.7E-44 5.9E-49 372.7 38.3 363 7-503 15-386 (387)
41 PRK07683 aminotransferase A; V 100.0 4.8E-44 1E-48 370.6 39.4 361 5-503 14-383 (387)
42 TIGR03537 DapC succinyldiamino 100.0 3.7E-44 7.9E-49 366.7 37.4 333 27-499 15-349 (350)
43 PRK05957 aspartate aminotransf 100.0 6.8E-44 1.5E-48 369.8 38.8 349 22-507 35-389 (389)
44 PRK07309 aromatic amino acid a 100.0 1.5E-43 3.2E-48 367.5 41.0 362 7-504 18-389 (391)
45 PRK07337 aminotransferase; Val 100.0 4.1E-44 8.9E-49 371.5 36.5 346 22-501 38-387 (388)
46 TIGR01265 tyr_nico_aTase tyros 100.0 8.6E-44 1.9E-48 370.7 38.9 346 27-503 50-401 (403)
47 COG1167 ARO8 Transcriptional r 100.0 1.2E-43 2.6E-48 373.1 38.4 351 22-505 100-457 (459)
48 PRK07590 L,L-diaminopimelate a 100.0 4.6E-44 1E-48 373.4 34.5 340 22-500 42-408 (409)
49 PRK05839 hypothetical protein; 100.0 1.8E-43 4E-48 364.6 38.3 354 5-502 8-373 (374)
50 PRK07777 aminotransferase; Val 100.0 1.9E-43 4.1E-48 366.4 38.5 364 7-502 13-385 (387)
51 PRK06290 aspartate aminotransf 100.0 9.3E-44 2E-48 370.2 36.2 319 22-416 52-375 (410)
52 PRK08363 alanine aminotransfer 100.0 1.6E-43 3.4E-48 368.3 37.6 344 27-504 48-395 (398)
53 PRK09265 aminotransferase AlaT 100.0 2.4E-43 5.2E-48 367.6 38.3 349 27-505 51-403 (404)
54 PRK05764 aspartate aminotransf 100.0 2.5E-43 5.4E-48 366.2 38.3 350 22-503 39-391 (393)
55 PRK09082 methionine aminotrans 100.0 1E-43 2.3E-48 368.1 35.3 359 7-499 19-385 (386)
56 PRK09275 aspartate aminotransf 100.0 2.1E-43 4.5E-48 371.8 34.5 373 22-509 108-523 (527)
57 PRK07568 aspartate aminotransf 100.0 1.6E-42 3.4E-47 360.7 38.6 367 6-507 13-396 (397)
58 PRK07550 hypothetical protein; 100.0 1.7E-42 3.6E-47 359.2 38.1 344 22-500 37-384 (386)
59 PRK08175 aminotransferase; Val 100.0 1.6E-42 3.5E-47 360.2 37.3 350 22-504 37-390 (395)
60 PRK15481 transcriptional regul 100.0 1.6E-42 3.4E-47 364.4 35.1 327 27-502 100-430 (431)
61 TIGR03801 asp_4_decarbox aspar 100.0 4.5E-42 9.7E-47 361.2 35.6 373 22-508 102-521 (521)
62 PRK09257 aromatic amino acid a 100.0 1.1E-41 2.4E-46 354.1 34.1 312 28-411 47-371 (396)
63 PRK06836 aspartate aminotransf 100.0 5.2E-41 1.1E-45 348.8 38.2 336 22-504 41-392 (394)
64 KOG0256|consensus 100.0 1.1E-41 2.3E-46 331.4 30.4 347 45-506 113-464 (471)
65 PTZ00376 aspartate aminotransf 100.0 1.8E-41 3.8E-46 353.3 33.9 342 27-503 45-403 (404)
66 TIGR03542 DAPAT_plant LL-diami 100.0 4.2E-41 9.1E-46 350.4 33.9 338 22-500 41-401 (402)
67 PLN02672 methionine S-methyltr 100.0 2.3E-40 4.9E-45 368.0 38.8 365 22-502 705-1079(1082)
68 PF00155 Aminotran_1_2: Aminot 100.0 4.2E-41 9.1E-46 345.7 29.9 325 44-497 35-363 (363)
69 PRK09440 avtA valine--pyruvate 100.0 8.3E-40 1.8E-44 342.3 37.5 361 22-507 38-415 (416)
70 PRK07865 N-succinyldiaminopime 100.0 3.7E-40 8E-45 339.0 34.2 324 22-498 35-363 (364)
71 PLN02397 aspartate transaminas 100.0 8E-40 1.7E-44 342.2 37.0 344 23-503 60-421 (423)
72 PRK06358 threonine-phosphate d 100.0 3.9E-40 8.5E-45 337.3 33.8 318 26-442 33-350 (354)
73 PRK02610 histidinol-phosphate 100.0 1.5E-39 3.3E-44 335.5 35.8 332 22-503 36-371 (374)
74 TIGR03539 DapC_actino succinyl 100.0 1.4E-39 3.1E-44 333.6 33.5 324 22-498 29-357 (357)
75 PRK08637 hypothetical protein; 100.0 2.7E-39 5.8E-44 335.3 35.6 349 27-504 18-387 (388)
76 PRK06225 aspartate aminotransf 100.0 1.4E-38 3E-43 329.1 36.6 340 22-506 36-379 (380)
77 PRK01533 histidinol-phosphate 100.0 1.5E-39 3.2E-44 334.0 28.7 313 22-443 37-351 (366)
78 PRK14809 histidinol-phosphate 100.0 1.4E-38 2.9E-43 326.5 34.2 317 22-502 38-356 (357)
79 PRK03317 histidinol-phosphate 100.0 1.1E-38 2.3E-43 328.6 33.4 299 22-411 34-334 (368)
80 PRK07392 threonine-phosphate d 100.0 2.9E-38 6.2E-43 324.4 34.9 291 27-417 37-330 (360)
81 PRK08056 threonine-phosphate d 100.0 1.2E-37 2.6E-42 319.3 35.7 297 22-417 28-326 (356)
82 PRK03158 histidinol-phosphate 100.0 4.8E-38 1.1E-42 322.7 32.8 296 22-417 37-334 (359)
83 COG0079 HisC Histidinol-phosph 100.0 6.5E-38 1.4E-42 317.5 32.4 314 27-444 37-351 (356)
84 KOG0634|consensus 100.0 5.8E-38 1.2E-42 307.9 30.1 359 45-509 92-472 (472)
85 PRK04870 histidinol-phosphate 100.0 9.6E-38 2.1E-42 320.1 33.2 294 22-417 34-329 (356)
86 PRK05166 histidinol-phosphate 100.0 1.7E-37 3.6E-42 320.0 34.5 292 27-415 51-342 (371)
87 PRK04781 histidinol-phosphate 100.0 6.1E-38 1.3E-42 322.2 30.7 305 46-443 53-359 (364)
88 PRK06425 histidinol-phosphate 100.0 1.2E-37 2.5E-42 316.3 30.5 296 45-442 33-328 (332)
89 PRK08153 histidinol-phosphate 100.0 3E-37 6.5E-42 317.7 33.4 325 22-505 40-367 (369)
90 PRK09105 putative aminotransfe 100.0 7.2E-37 1.6E-41 314.7 33.6 284 22-409 51-336 (370)
91 PRK14807 histidinol-phosphate 100.0 8E-37 1.7E-41 312.6 33.4 316 22-442 30-347 (351)
92 PRK01688 histidinol-phosphate 100.0 8.8E-38 1.9E-42 319.6 25.8 300 45-441 50-350 (351)
93 PRK07908 hypothetical protein; 100.0 1.4E-36 3E-41 310.6 33.7 283 26-417 36-318 (349)
94 PLN03026 histidinol-phosphate 100.0 2.4E-36 5.2E-41 312.1 35.1 291 22-414 60-352 (380)
95 PRK05387 histidinol-phosphate 100.0 2.2E-36 4.9E-41 309.6 33.1 317 22-502 32-352 (353)
96 COG3977 Alanine-alpha-ketoisov 100.0 1.1E-35 2.4E-40 278.3 31.0 378 5-507 13-415 (417)
97 PRK02731 histidinol-phosphate 100.0 1.6E-35 3.5E-40 304.9 34.0 294 26-417 46-339 (367)
98 PRK14808 histidinol-phosphate 100.0 1.1E-35 2.5E-40 301.9 30.8 304 22-442 27-332 (335)
99 TIGR01141 hisC histidinol-phos 100.0 3.2E-35 7E-40 300.2 30.6 295 22-417 27-323 (346)
100 PRK04635 histidinol-phosphate 100.0 2E-35 4.4E-40 302.5 28.6 270 46-413 54-324 (354)
101 PRK03967 histidinol-phosphate 100.0 5.7E-35 1.2E-39 297.1 28.9 302 22-442 26-329 (337)
102 PRK00950 histidinol-phosphate 100.0 2.2E-34 4.8E-39 295.7 31.9 316 22-501 42-360 (361)
103 PRK03321 putative aminotransfe 100.0 1.4E-34 3.1E-39 296.1 29.5 316 22-443 30-347 (352)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.1E-33 2.4E-38 287.0 30.8 267 45-417 40-306 (330)
105 PRK05664 threonine-phosphate d 100.0 1.4E-33 3.1E-38 286.1 31.6 249 49-411 47-297 (330)
106 PRK08354 putative aminotransfe 100.0 8.4E-34 1.8E-38 285.4 29.2 291 23-443 18-308 (311)
107 PRK06959 putative threonine-ph 100.0 1.7E-33 3.8E-38 286.2 31.5 254 47-411 49-302 (339)
108 cd00609 AAT_like Aspartate ami 100.0 4.8E-30 1E-34 261.2 36.8 320 45-498 28-349 (350)
109 PRK13238 tnaA tryptophanase/L- 100.0 1.1E-29 2.3E-34 266.8 34.2 351 29-503 58-433 (460)
110 COG1448 TyrB Aspartate/tyrosin 100.0 6.7E-29 1.5E-33 242.2 29.6 332 6-410 14-370 (396)
111 TIGR03576 pyridox_MJ0158 pyrid 100.0 2.3E-26 5E-31 233.9 34.0 276 27-416 35-314 (346)
112 PRK10874 cysteine sulfinate de 100.0 2.3E-26 4.9E-31 239.7 32.8 373 6-503 7-398 (401)
113 TIGR03392 FeS_syn_CsdA cystein 100.0 2.7E-26 5.8E-31 238.9 32.7 372 7-503 5-395 (398)
114 cd00617 Tnase_like Tryptophana 100.0 4.7E-26 1E-30 236.2 31.5 348 29-503 33-408 (431)
115 PRK06939 2-amino-3-ketobutyrat 100.0 9.7E-26 2.1E-30 234.4 32.6 335 24-504 53-394 (397)
116 KOG0633|consensus 100.0 1.7E-27 3.6E-32 219.5 16.1 319 42-443 47-373 (375)
117 PLN02822 serine palmitoyltrans 100.0 2.8E-25 6.1E-30 235.2 34.3 338 27-506 125-480 (481)
118 TIGR00858 bioF 8-amino-7-oxono 99.9 1.9E-25 4.2E-30 228.8 31.7 321 26-498 31-360 (360)
119 TIGR01822 2am3keto_CoA 2-amino 99.9 6.9E-25 1.5E-29 227.9 34.7 324 27-504 54-390 (393)
120 PRK10534 L-threonine aldolase; 99.9 1.3E-25 2.9E-30 228.1 27.6 289 24-412 10-304 (333)
121 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 5.5E-25 1.2E-29 226.7 32.5 179 56-269 54-234 (370)
122 TIGR01825 gly_Cac_T_rel pyrido 99.9 7.7E-25 1.7E-29 226.8 32.1 331 24-503 44-381 (385)
123 PRK02627 acetylornithine amino 99.9 2.6E-25 5.6E-30 231.3 27.0 217 27-277 57-286 (396)
124 COG0520 csdA Selenocysteine ly 99.9 1.6E-24 3.4E-29 223.4 31.8 374 4-502 4-404 (405)
125 PF12897 Aminotran_MocR: Alani 99.9 9.2E-25 2E-29 213.6 28.0 335 42-504 57-416 (425)
126 PLN02483 serine palmitoyltrans 99.9 3.1E-24 6.6E-29 227.8 33.6 317 49-508 142-471 (489)
127 TIGR01979 sufS cysteine desulf 99.9 1.8E-24 4E-29 225.5 31.3 354 23-504 27-402 (403)
128 cd06451 AGAT_like Alanine-glyo 99.9 1.9E-24 4.1E-29 221.6 30.8 340 21-501 5-355 (356)
129 PLN02721 threonine aldolase 99.9 4.8E-24 1E-28 218.1 33.3 321 27-502 19-351 (353)
130 PRK02948 cysteine desulfurase; 99.9 6.2E-25 1.4E-29 227.3 26.5 347 23-506 9-377 (381)
131 cd06454 KBL_like KBL_like; thi 99.9 4.1E-24 8.9E-29 218.2 32.1 329 20-500 11-348 (349)
132 PLN02855 Bifunctional selenocy 99.9 1.6E-24 3.4E-29 227.5 29.4 355 24-504 42-419 (424)
133 PRK09295 bifunctional cysteine 99.9 4.1E-24 8.8E-29 223.1 32.4 372 5-502 5-403 (406)
134 PRK01278 argD acetylornithine 99.9 1.1E-24 2.3E-29 226.2 27.4 219 27-277 49-279 (389)
135 PRK13392 5-aminolevulinate syn 99.9 5.6E-24 1.2E-28 222.3 32.5 327 27-504 62-398 (410)
136 TIGR03403 nifS_epsilon cystein 99.9 2.9E-24 6.3E-29 222.4 29.8 354 23-505 8-377 (382)
137 COG1104 NifS Cysteine sulfinat 99.9 1.7E-24 3.7E-29 215.6 26.3 351 24-506 11-380 (386)
138 cd06502 TA_like Low-specificit 99.9 4.6E-24 9.9E-29 217.0 30.2 264 26-373 10-281 (338)
139 TIGR01976 am_tr_V_VC1184 cyste 99.9 5.3E-24 1.1E-28 221.5 31.0 330 8-416 6-361 (397)
140 PRK05958 8-amino-7-oxononanoat 99.9 1.2E-23 2.6E-28 217.8 33.0 325 27-500 55-384 (385)
141 cd00378 SHMT Serine-glycine hy 99.9 4.5E-24 9.7E-29 222.5 29.8 302 22-413 27-341 (402)
142 TIGR00707 argD acetylornithine 99.9 4.2E-24 9.2E-29 220.9 26.8 218 27-277 45-274 (379)
143 PRK07049 methionine gamma-lyas 99.9 6.2E-23 1.3E-27 214.2 34.9 231 46-362 77-315 (427)
144 TIGR03402 FeS_nifS cysteine de 99.9 3.5E-23 7.6E-28 214.1 30.5 349 23-505 8-374 (379)
145 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 8.6E-23 1.9E-27 209.8 33.0 211 24-269 11-227 (361)
146 cd06453 SufS_like Cysteine des 99.9 2.5E-23 5.5E-28 214.6 27.4 319 22-417 7-341 (373)
147 PRK07179 hypothetical protein; 99.9 2.6E-22 5.6E-27 209.6 33.9 325 27-506 70-401 (407)
148 PRK03244 argD acetylornithine 99.9 1.6E-23 3.5E-28 218.0 24.7 323 27-504 61-395 (398)
149 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.6E-22 3.5E-27 206.8 31.3 338 23-500 7-354 (355)
150 PRK09064 5-aminolevulinate syn 99.9 3.4E-22 7.3E-27 208.7 33.4 328 27-505 62-399 (407)
151 TIGR01821 5aminolev_synth 5-am 99.9 2.9E-22 6.2E-27 208.9 32.5 327 27-504 61-397 (402)
152 PLN02409 serine--glyoxylate am 99.9 3.7E-22 8E-27 207.7 31.3 349 22-505 16-374 (401)
153 PRK08247 cystathionine gamma-s 99.9 4.2E-22 9.1E-27 204.7 31.3 237 45-377 45-288 (366)
154 TIGR01977 am_tr_V_EF2568 cyste 99.9 2.5E-22 5.4E-27 207.4 29.0 348 26-499 12-375 (376)
155 TIGR02006 IscS cysteine desulf 99.9 3.6E-22 7.8E-27 208.1 28.3 350 23-505 12-379 (402)
156 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.6E-21 7.7E-26 199.5 34.9 209 24-267 30-244 (387)
157 PRK02936 argD acetylornithine 99.9 3.4E-22 7.3E-27 206.6 27.1 217 26-277 46-271 (377)
158 cd06450 DOPA_deC_like DOPA dec 99.9 2.4E-22 5.3E-27 205.0 25.5 263 24-373 9-283 (345)
159 TIGR01437 selA_rel uncharacter 99.9 1.2E-21 2.6E-26 201.0 30.7 198 19-266 18-231 (363)
160 TIGR02326 transamin_PhnW 2-ami 99.9 1.5E-21 3.3E-26 200.7 31.5 313 56-501 38-360 (363)
161 cd00610 OAT_like Acetyl ornith 99.9 2.2E-22 4.8E-27 210.4 25.5 209 26-264 53-281 (413)
162 PRK13479 2-aminoethylphosphona 99.9 2E-21 4.4E-26 200.1 31.6 320 54-504 38-364 (368)
163 PRK13393 5-aminolevulinate syn 99.9 4.4E-21 9.6E-26 200.2 34.0 327 27-504 61-397 (406)
164 PRK04073 rocD ornithine--oxo-a 99.9 4.1E-22 8.9E-27 207.2 25.7 320 27-501 58-395 (396)
165 PLN02242 methionine gamma-lyas 99.9 2.9E-21 6.2E-26 201.0 31.2 217 54-364 77-302 (418)
166 PRK13520 L-tyrosine decarboxyl 99.9 1.3E-20 2.8E-25 194.2 35.9 336 26-502 32-370 (371)
167 PRK14012 cysteine desulfurase; 99.9 2E-21 4.3E-26 202.7 27.9 193 23-253 12-218 (404)
168 PRK05093 argD bifunctional N-s 99.9 1.6E-21 3.5E-26 203.2 26.8 320 26-504 57-401 (403)
169 PRK08088 4-aminobutyrate amino 99.9 4.8E-21 1E-25 200.8 27.7 344 27-504 59-424 (425)
170 TIGR00713 hemL glutamate-1-sem 99.9 2E-21 4.4E-26 203.8 24.3 206 27-266 66-286 (423)
171 PRK08133 O-succinylhomoserine 99.9 4.5E-20 9.7E-25 191.0 33.3 195 28-269 37-235 (390)
172 PRK06460 hypothetical protein; 99.9 2.7E-20 5.9E-25 191.7 31.4 217 53-362 45-265 (376)
173 KOG1412|consensus 99.9 9.2E-21 2E-25 179.1 25.3 320 22-411 45-378 (410)
174 PRK12381 bifunctional succinyl 99.9 6.6E-21 1.4E-25 198.7 27.1 329 27-507 57-403 (406)
175 TIGR02080 O_succ_thio_ly O-suc 99.9 3.6E-20 7.8E-25 191.0 30.7 179 45-269 44-226 (382)
176 PRK08045 cystathionine gamma-s 99.9 7.3E-20 1.6E-24 188.8 32.7 225 44-362 44-273 (386)
177 TIGR03812 tyr_de_CO2_Arch tyro 99.9 7.9E-20 1.7E-24 188.5 32.1 326 29-499 35-372 (373)
178 PRK08776 cystathionine gamma-s 99.9 9.3E-20 2E-24 189.1 32.6 223 46-362 54-281 (405)
179 TIGR03235 DNA_S_dndA cysteine 99.9 8.3E-21 1.8E-25 194.5 24.5 310 23-417 7-326 (353)
180 PRK00011 glyA serine hydroxyme 99.9 6.9E-20 1.5E-24 191.9 31.0 301 22-412 33-344 (416)
181 PRK07582 cystathionine gamma-l 99.9 7E-20 1.5E-24 188.1 30.1 175 45-269 44-222 (366)
182 PRK06234 methionine gamma-lyas 99.9 6.9E-20 1.5E-24 190.2 30.3 174 46-267 58-238 (400)
183 cd00613 GDC-P Glycine cleavage 99.9 4.2E-20 9.2E-25 192.3 28.0 202 22-264 28-246 (398)
184 PRK00451 glycine dehydrogenase 99.9 6.1E-20 1.3E-24 194.0 29.4 169 58-264 110-290 (447)
185 PRK08861 cystathionine gamma-s 99.9 3.4E-19 7.3E-24 183.5 33.0 179 45-269 46-228 (388)
186 PLN02651 cysteine desulfurase 99.9 3.5E-20 7.5E-25 190.7 25.4 336 23-491 8-364 (364)
187 PRK00854 rocD ornithine--oxo-a 99.9 1.3E-19 2.8E-24 188.9 28.5 316 27-502 59-400 (401)
188 PRK08249 cystathionine gamma-s 99.9 3.5E-19 7.5E-24 184.5 31.4 177 46-269 58-238 (398)
189 TIGR02379 ECA_wecE TDP-4-keto- 99.9 5.7E-19 1.2E-23 181.8 32.8 202 22-269 5-208 (376)
190 PRK06767 methionine gamma-lyas 99.9 2.6E-19 5.7E-24 185.2 30.1 223 45-363 54-283 (386)
191 PLN03227 serine palmitoyltrans 99.9 1.2E-18 2.7E-23 180.5 35.0 207 27-267 14-232 (392)
192 PRK07503 methionine gamma-lyas 99.9 3.5E-19 7.5E-24 185.1 30.8 173 46-266 59-236 (403)
193 PRK04260 acetylornithine amino 99.9 1.2E-19 2.5E-24 187.5 27.0 317 27-500 46-374 (375)
194 PRK07504 O-succinylhomoserine 99.9 4.3E-19 9.3E-24 184.1 31.2 174 46-266 59-237 (398)
195 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.8E-19 4E-24 188.5 28.5 339 27-502 51-419 (420)
196 TIGR03246 arg_catab_astC succi 99.9 1.1E-19 2.3E-24 189.0 26.4 202 27-267 53-272 (397)
197 PRK06918 4-aminobutyrate amino 99.9 3.8E-19 8.2E-24 187.7 30.9 346 27-507 72-447 (451)
198 cd00614 CGS_like CGS_like: Cys 99.9 3E-19 6.5E-24 183.9 29.4 177 46-269 34-215 (369)
199 PLN00144 acetylornithine trans 99.9 7.1E-20 1.5E-24 189.1 24.6 328 27-504 33-381 (382)
200 TIGR01328 met_gam_lyase methio 99.9 3.8E-19 8.3E-24 184.0 29.6 175 45-267 52-231 (391)
201 PTZ00125 ornithine aminotransf 99.9 1.7E-19 3.7E-24 187.9 26.8 211 27-267 49-272 (400)
202 TIGR01325 O_suc_HS_sulf O-succ 99.9 1E-18 2.2E-23 180.4 32.1 177 45-269 47-228 (380)
203 PRK07050 cystathionine beta-ly 99.9 6E-19 1.3E-23 182.7 29.9 179 45-269 58-240 (394)
204 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2E-18 4.4E-23 178.3 33.6 200 22-269 8-208 (379)
205 PRK07811 cystathionine gamma-s 99.8 1.3E-18 2.9E-23 179.9 31.5 173 52-269 60-236 (388)
206 PRK07505 hypothetical protein; 99.8 1.7E-18 3.8E-23 180.4 32.3 208 25-269 60-276 (402)
207 KOG1549|consensus 99.8 2.2E-19 4.7E-24 179.8 23.7 197 23-253 52-255 (428)
208 PF00266 Aminotran_5: Aminotra 99.8 6.7E-19 1.4E-23 181.6 28.2 319 22-416 7-342 (371)
209 COG0156 BioF 7-keto-8-aminopel 99.8 3.2E-18 7E-23 173.6 32.5 324 27-500 55-387 (388)
210 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 3.6E-18 7.8E-23 176.3 33.3 200 22-269 5-207 (375)
211 PRK09028 cystathionine beta-ly 99.8 3.5E-18 7.7E-23 175.8 32.0 175 49-269 55-235 (394)
212 PRK07269 cystathionine gamma-s 99.8 7.1E-19 1.5E-23 180.1 26.7 236 45-374 47-286 (364)
213 TIGR03588 PseC UDP-4-keto-6-de 99.8 5.2E-18 1.1E-22 175.5 32.6 205 22-269 4-211 (380)
214 PLN02955 8-amino-7-oxononanoat 99.8 7.2E-18 1.6E-22 174.9 33.4 326 27-507 118-465 (476)
215 PLN02624 ornithine-delta-amino 99.8 1.9E-18 4.1E-23 183.0 29.8 222 27-277 93-329 (474)
216 KOG1411|consensus 99.8 2.6E-19 5.5E-24 171.7 20.7 333 7-410 41-397 (427)
217 PRK08064 cystathionine beta-ly 99.8 2.4E-18 5.2E-23 178.2 29.8 172 55-272 56-231 (390)
218 PRK06777 4-aminobutyrate amino 99.8 1.9E-18 4.2E-23 180.6 28.6 334 27-502 58-420 (421)
219 PRK09792 4-aminobutyrate trans 99.8 2.1E-18 4.5E-23 180.4 28.6 225 27-277 58-302 (421)
220 cd00616 AHBA_syn 3-amino-5-hyd 99.8 6.5E-18 1.4E-22 172.7 31.3 190 31-269 2-194 (352)
221 PRK08574 cystathionine gamma-s 99.8 5.8E-18 1.3E-22 174.8 30.8 177 46-269 47-227 (385)
222 PRK07810 O-succinylhomoserine 99.8 6.2E-18 1.3E-22 175.5 30.2 174 46-267 64-243 (403)
223 PRK05968 hypothetical protein; 99.8 1.3E-17 2.9E-22 172.5 31.4 177 45-269 56-236 (389)
224 COG0399 WecE Predicted pyridox 99.8 7.4E-18 1.6E-22 169.7 27.9 261 22-364 9-274 (374)
225 TIGR01329 cysta_beta_ly_E cyst 99.8 8.2E-18 1.8E-22 173.5 28.8 168 56-269 50-221 (378)
226 COG4992 ArgD Ornithine/acetylo 99.8 4.8E-18 1E-22 169.3 25.5 330 26-507 59-402 (404)
227 PRK04366 glycine dehydrogenase 99.8 1.4E-17 3E-22 177.0 29.4 210 22-264 76-297 (481)
228 PRK08117 4-aminobutyrate amino 99.8 1.2E-17 2.7E-22 175.5 27.9 225 27-277 61-311 (433)
229 PRK07671 cystathionine beta-ly 99.8 5.4E-17 1.2E-21 167.2 31.9 177 46-269 44-224 (377)
230 TIGR01814 kynureninase kynuren 99.8 1.5E-17 3.4E-22 173.5 28.1 192 27-245 40-240 (406)
231 PRK08360 4-aminobutyrate amino 99.8 3.2E-17 6.9E-22 172.2 29.8 225 27-277 59-308 (443)
232 PRK04612 argD acetylornithine 99.8 5.9E-17 1.3E-21 168.5 31.4 219 27-277 58-291 (408)
233 PRK07495 4-aminobutyrate amino 99.8 2.3E-17 4.9E-22 172.5 28.4 224 27-277 58-302 (425)
234 PRK00062 glutamate-1-semialdeh 99.8 8.4E-18 1.8E-22 176.2 25.3 206 27-265 68-287 (426)
235 TIGR01324 cysta_beta_ly_B cyst 99.8 3.4E-17 7.4E-22 168.4 29.3 166 56-267 53-222 (377)
236 PRK05937 8-amino-7-oxononanoat 99.8 9.4E-17 2E-21 165.5 31.9 176 53-265 56-232 (370)
237 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.9E-17 6.4E-22 171.6 28.1 163 46-253 51-217 (418)
238 PRK08248 O-acetylhomoserine am 99.8 1.1E-16 2.5E-21 167.2 31.5 155 55-253 66-224 (431)
239 TIGR02407 ectoine_ectB diamino 99.8 3E-17 6.5E-22 171.2 27.0 337 27-502 53-411 (412)
240 TIGR01885 Orn_aminotrans ornit 99.8 2.6E-17 5.6E-22 171.5 26.2 205 27-266 55-279 (401)
241 PLN02509 cystathionine beta-ly 99.8 1.3E-16 2.9E-21 167.1 30.9 223 48-362 126-353 (464)
242 PRK06084 O-acetylhomoserine am 99.8 9.9E-17 2.2E-21 167.4 29.4 155 55-253 60-218 (425)
243 PRK09264 diaminobutyrate--2-ox 99.8 8.9E-17 1.9E-21 168.4 29.0 211 27-260 57-285 (425)
244 PRK06058 4-aminobutyrate amino 99.8 4.5E-17 9.7E-22 171.5 26.7 230 27-281 74-327 (443)
245 cd00615 Orn_deC_like Ornithine 99.8 1.1E-17 2.4E-22 166.9 20.0 170 51-252 57-231 (294)
246 PRK06176 cystathionine gamma-s 99.8 2.8E-16 6.1E-21 162.0 30.8 177 46-269 44-224 (380)
247 COG0001 HemL Glutamate-1-semia 99.8 5.2E-17 1.1E-21 163.6 24.3 339 27-506 71-431 (432)
248 PRK05939 hypothetical protein; 99.8 2.1E-16 4.6E-21 163.6 29.7 154 56-253 50-206 (397)
249 PRK05967 cystathionine beta-ly 99.8 3.9E-16 8.4E-21 160.5 30.6 171 56-268 63-237 (395)
250 TIGR02618 tyr_phenol_ly tyrosi 99.8 8.8E-16 1.9E-20 157.4 32.9 355 32-503 50-426 (450)
251 PF04864 Alliinase_C: Allinase 99.8 1.1E-18 2.3E-23 169.3 10.5 301 56-501 46-363 (363)
252 KOG1368|consensus 99.8 2.1E-16 4.6E-21 149.1 25.6 293 29-413 37-338 (384)
253 PRK06702 O-acetylhomoserine am 99.8 1.9E-16 4.2E-21 164.5 27.6 149 55-245 63-215 (432)
254 PRK15407 lipopolysaccharide bi 99.8 1.2E-15 2.5E-20 160.1 33.0 198 23-269 39-247 (438)
255 COG0160 GabT 4-aminobutyrate a 99.8 1.2E-15 2.7E-20 156.4 30.6 231 26-281 73-329 (447)
256 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 1.5E-15 3.3E-20 155.6 30.0 169 56-269 58-232 (386)
257 PRK05964 adenosylmethionine--8 99.7 3.8E-16 8.2E-21 163.8 25.8 214 27-266 60-293 (423)
258 PLN02724 Molybdenum cofactor s 99.7 2.2E-15 4.7E-20 169.3 32.1 411 6-501 22-486 (805)
259 COG2008 GLY1 Threonine aldolas 99.7 1E-15 2.2E-20 149.9 25.0 208 28-269 14-225 (342)
260 PRK06541 hypothetical protein; 99.7 1.5E-15 3.3E-20 160.1 28.2 215 27-266 70-314 (460)
261 PRK13034 serine hydroxymethylt 99.7 3.3E-15 7.2E-20 156.0 30.0 294 22-411 36-346 (416)
262 TIGR00709 dat 2,4-diaminobutyr 99.7 2.8E-15 6E-20 157.8 29.5 225 27-278 57-310 (442)
263 PF01041 DegT_DnrJ_EryC1: DegT 99.7 2.5E-15 5.3E-20 154.5 27.3 299 28-413 5-310 (363)
264 COG0075 Serine-pyruvate aminot 99.7 1E-14 2.3E-19 146.8 30.3 345 22-505 12-365 (383)
265 PRK05994 O-acetylhomoserine am 99.7 1.4E-14 3E-19 151.7 32.2 153 56-252 66-222 (427)
266 PRK13237 tyrosine phenol-lyase 99.7 3.2E-14 7E-19 146.3 34.0 337 49-503 74-433 (460)
267 PRK03715 argD acetylornithine 99.7 2.5E-15 5.4E-20 155.8 26.3 201 27-261 54-266 (395)
268 cd00611 PSAT_like Phosphoserin 99.7 1.8E-15 4E-20 155.0 24.8 267 22-361 6-281 (355)
269 TIGR01788 Glu-decarb-GAD gluta 99.7 3.6E-14 7.9E-19 147.9 33.7 357 22-504 50-430 (431)
270 PRK08114 cystathionine beta-ly 99.7 1.6E-14 3.5E-19 148.5 30.5 167 56-268 65-237 (395)
271 PRK11522 putrescine--2-oxoglut 99.7 8.4E-15 1.8E-19 154.2 29.2 214 27-265 100-323 (459)
272 PRK08134 O-acetylhomoserine am 99.7 1.2E-14 2.6E-19 152.0 30.1 154 55-252 66-223 (433)
273 PRK08593 4-aminobutyrate amino 99.7 4.2E-15 9.2E-20 156.3 26.6 214 27-265 60-298 (445)
274 TIGR03531 selenium_SpcS O-phos 99.7 5.5E-14 1.2E-18 146.0 34.4 191 55-268 103-299 (444)
275 PRK07812 O-acetylhomoserine am 99.7 2.1E-14 4.5E-19 150.1 31.2 155 56-253 72-230 (436)
276 PTZ00094 serine hydroxymethylt 99.7 1.1E-14 2.3E-19 154.0 29.3 332 22-503 42-408 (452)
277 TIGR03372 putres_am_tran putre 99.7 2.1E-14 4.5E-19 150.3 29.1 214 27-265 93-316 (442)
278 TIGR01364 serC_1 phosphoserine 99.7 1.8E-14 3.9E-19 146.9 27.4 332 26-503 3-348 (349)
279 PLN02760 4-aminobutyrate:pyruv 99.7 2.5E-14 5.5E-19 152.1 29.0 215 27-266 107-353 (504)
280 PRK02769 histidine decarboxyla 99.7 5.5E-14 1.2E-18 144.6 30.3 302 7-373 10-326 (380)
281 PLN02482 glutamate-1-semialdeh 99.7 1.5E-14 3.3E-19 152.5 26.5 205 27-265 117-336 (474)
282 PRK13580 serine hydroxymethylt 99.7 3.7E-14 8E-19 147.5 28.1 307 22-417 57-405 (493)
283 PRK07678 aminotransferase; Val 99.7 4.8E-14 1E-18 148.6 28.8 213 27-266 65-306 (451)
284 PRK03080 phosphoserine aminotr 99.7 2.7E-14 5.8E-19 147.6 26.3 342 22-506 19-376 (378)
285 PRK05965 hypothetical protein; 99.7 1.9E-14 4E-19 152.0 25.5 214 27-265 64-307 (459)
286 PRK05769 4-aminobutyrate amino 99.7 7.5E-14 1.6E-18 146.7 29.8 213 27-264 72-311 (441)
287 cd01494 AAT_I Aspartate aminot 99.7 2.7E-15 5.9E-20 136.0 16.1 165 56-252 3-168 (170)
288 PRK07046 aminotransferase; Val 99.7 5.8E-14 1.3E-18 147.8 28.3 202 27-266 93-308 (453)
289 PRK06173 adenosylmethionine--8 99.7 1.9E-14 4.1E-19 150.5 24.2 212 27-265 62-299 (429)
290 PRK07482 hypothetical protein; 99.7 5.6E-14 1.2E-18 148.4 27.7 215 27-265 68-312 (461)
291 COG0626 MetC Cystathionine bet 99.7 1.4E-13 3E-18 139.7 29.2 167 56-266 66-236 (396)
292 PRK12389 glutamate-1-semialdeh 99.7 4.7E-14 1E-18 147.9 26.8 206 27-265 71-290 (428)
293 PLN02880 tyrosine decarboxylas 99.6 3.1E-13 6.8E-18 143.4 32.9 191 49-253 114-320 (490)
294 KOG0053|consensus 99.6 1.4E-13 3E-18 138.1 27.8 177 56-277 80-261 (409)
295 PRK05639 4-aminobutyrate amino 99.6 2.7E-13 5.8E-18 142.9 31.6 210 27-262 71-310 (457)
296 PRK13360 omega amino acid--pyr 99.6 6.4E-14 1.4E-18 147.2 26.7 215 27-266 64-308 (442)
297 PRK07986 adenosylmethionine--8 99.6 4.5E-14 9.8E-19 147.5 25.4 213 27-266 61-298 (428)
298 PRK09221 beta alanine--pyruvat 99.6 6.7E-14 1.4E-18 147.2 26.5 214 27-265 67-310 (445)
299 PLN02590 probable tyrosine dec 99.6 1.3E-12 2.7E-17 139.1 36.0 200 49-264 162-378 (539)
300 PRK00615 glutamate-1-semialdeh 99.6 4.7E-14 1E-18 147.5 24.4 208 27-266 71-292 (433)
301 PRK06917 hypothetical protein; 99.6 2.9E-13 6.3E-18 142.5 30.0 215 27-266 49-293 (447)
302 PRK06943 adenosylmethionine--8 99.6 2.2E-13 4.8E-18 143.5 29.1 213 27-265 72-314 (453)
303 PRK06082 4-aminobutyrate amino 99.6 1.7E-13 3.6E-18 144.6 28.2 208 27-264 89-319 (459)
304 PLN02414 glycine dehydrogenase 99.6 1.8E-13 3.8E-18 153.6 29.5 192 45-264 553-755 (993)
305 PRK07480 putative aminotransfe 99.6 6.4E-14 1.4E-18 147.7 24.7 215 27-265 68-311 (456)
306 PRK07036 hypothetical protein; 99.6 1.5E-13 3.3E-18 145.2 27.6 216 27-265 69-313 (466)
307 PRK06434 cystathionine gamma-l 99.6 2E-13 4.2E-18 140.5 27.5 166 55-268 66-235 (384)
308 PRK05355 3-phosphoserine/phosp 99.6 1.3E-13 2.9E-18 141.2 26.2 337 22-503 10-358 (360)
309 PRK06105 aminotransferase; Pro 99.6 6.5E-14 1.4E-18 147.9 24.4 215 27-266 66-311 (460)
310 PRK04013 argD acetylornithine/ 99.6 3.3E-14 7.3E-19 145.3 21.1 197 27-260 42-247 (364)
311 PLN03032 serine decarboxylase; 99.6 5.1E-13 1.1E-17 136.6 29.5 220 20-264 26-255 (374)
312 PRK06938 diaminobutyrate--2-ox 99.6 2.4E-13 5.3E-18 143.5 28.0 230 27-281 81-338 (464)
313 COG1103 Archaea-specific pyrid 99.6 3.9E-13 8.5E-18 125.6 25.8 310 56-504 64-381 (382)
314 PRK06062 hypothetical protein; 99.6 2.3E-13 4.9E-18 143.4 27.2 211 27-265 71-306 (451)
315 PRK07481 hypothetical protein; 99.6 4E-13 8.7E-18 141.5 28.9 217 27-266 60-306 (449)
316 PRK05613 O-acetylhomoserine am 99.6 1.3E-12 2.9E-17 136.6 32.4 154 56-252 72-229 (437)
317 KOG1359|consensus 99.6 2.2E-13 4.7E-18 128.6 23.2 214 27-277 83-296 (417)
318 KOG1360|consensus 99.6 4.1E-13 8.9E-18 131.5 25.7 297 27-418 187-492 (570)
319 PRK12403 putative aminotransfe 99.6 1E-12 2.2E-17 138.9 30.6 215 27-265 72-314 (460)
320 PRK06916 adenosylmethionine--8 99.6 9.6E-14 2.1E-18 146.6 22.8 213 27-265 74-316 (460)
321 PRK07030 adenosylmethionine--8 99.6 1.8E-13 4E-18 144.5 24.5 213 27-265 65-307 (466)
322 PRK05630 adenosylmethionine--8 99.6 3.6E-13 7.8E-18 140.7 26.2 208 27-265 58-293 (422)
323 PRK08742 adenosylmethionine--8 99.6 1.3E-12 2.7E-17 138.2 29.5 215 27-265 82-329 (472)
324 PRK07483 hypothetical protein; 99.6 1.1E-12 2.4E-17 137.9 28.2 215 27-266 48-293 (443)
325 COG0161 BioA Adenosylmethionin 99.6 7E-13 1.5E-17 135.5 25.3 218 27-267 62-309 (449)
326 COG0076 GadB Glutamate decarbo 99.6 4.8E-13 1E-17 140.0 24.4 293 22-373 70-377 (460)
327 TIGR00508 bioA adenosylmethion 99.6 7.1E-13 1.5E-17 138.9 25.6 213 27-266 63-301 (427)
328 PRK06931 diaminobutyrate--2-ox 99.6 2.6E-12 5.5E-17 135.7 29.0 230 27-281 76-332 (459)
329 PRK06148 hypothetical protein; 99.6 1.6E-12 3.5E-17 149.0 28.9 228 27-281 640-894 (1013)
330 PLN03226 serine hydroxymethylt 99.6 5.2E-12 1.1E-16 133.5 30.3 301 22-413 42-376 (475)
331 PF01212 Beta_elim_lyase: Beta 99.5 7.4E-14 1.6E-18 138.0 14.9 205 28-267 9-218 (290)
332 PRK06149 hypothetical protein; 99.5 4.2E-12 9.1E-17 145.5 31.2 213 27-266 601-837 (972)
333 PRK08297 L-lysine aminotransfe 99.5 7.8E-12 1.7E-16 131.5 29.2 173 27-207 63-275 (443)
334 KOG1401|consensus 99.5 1.9E-12 4.1E-17 128.0 22.5 286 27-380 74-374 (433)
335 TIGR01366 serC_3 phosphoserine 99.5 1.8E-12 4E-17 133.0 23.1 340 18-503 5-360 (361)
336 TIGR03799 NOD_PanD_pyr putativ 99.5 5.8E-11 1.3E-15 126.6 34.9 275 49-372 121-434 (522)
337 PRK04311 selenocysteine syntha 99.5 4.5E-11 9.8E-16 125.6 32.4 203 22-266 94-315 (464)
338 COG2873 MET17 O-acetylhomoseri 99.5 4.2E-12 9.1E-17 124.1 22.3 154 56-253 65-222 (426)
339 PRK06209 glutamate-1-semialdeh 99.5 4.7E-12 1E-16 133.0 23.5 198 27-263 66-271 (431)
340 PRK15029 arginine decarboxylas 99.5 2.1E-11 4.6E-16 133.5 27.0 206 50-277 202-426 (755)
341 PLN02271 serine hydroxymethylt 99.5 4.8E-11 1E-15 125.0 28.3 304 22-411 156-495 (586)
342 PF01276 OKR_DC_1: Orn/Lys/Arg 99.5 2.5E-12 5.4E-17 131.7 17.6 204 50-277 63-279 (417)
343 TIGR03251 LAT_fam L-lysine 6-t 99.4 3.1E-11 6.8E-16 126.7 25.3 175 27-207 56-268 (431)
344 TIGR00474 selA seryl-tRNA(sec) 99.4 2.5E-11 5.4E-16 127.2 23.8 204 22-266 89-310 (454)
345 PLN02263 serine decarboxylase 99.4 2.7E-10 5.9E-15 118.6 31.0 180 54-253 130-314 (470)
346 PRK13578 ornithine decarboxyla 99.4 2E-10 4.2E-15 124.8 30.7 177 52-252 173-366 (720)
347 TIGR00699 GABAtrns_euk 4-amino 99.4 8.9E-11 1.9E-15 123.4 26.0 175 27-207 76-301 (464)
348 TIGR02617 tnaA_trp_ase tryptop 99.4 2.6E-10 5.6E-15 116.4 28.2 354 27-503 56-441 (467)
349 PF00282 Pyridoxal_deC: Pyrido 99.4 7.8E-11 1.7E-15 121.1 23.8 196 49-262 71-282 (373)
350 PLN02974 adenosylmethionine-8- 99.4 2.3E-10 5E-15 127.2 28.8 217 26-265 383-677 (817)
351 PRK05367 glycine dehydrogenase 99.4 2.9E-10 6.3E-15 128.5 29.1 146 46-202 528-681 (954)
352 KOG1404|consensus 99.4 6E-11 1.3E-15 116.6 20.4 225 27-281 68-321 (442)
353 PF00464 SHMT: Serine hydroxym 99.4 1.5E-10 3.2E-15 118.2 24.1 300 22-411 28-360 (399)
354 KOG1402|consensus 99.4 5E-11 1.1E-15 114.5 18.5 255 25-359 75-348 (427)
355 PLN02452 phosphoserine transam 99.4 2.9E-10 6.2E-15 116.3 25.1 305 22-413 14-331 (365)
356 PF00202 Aminotran_3: Aminotra 99.3 2.2E-11 4.7E-16 123.9 16.4 228 27-281 34-285 (339)
357 PRK15400 lysine decarboxylase 99.3 3.5E-10 7.5E-15 122.8 25.9 175 51-251 193-377 (714)
358 KOG2862|consensus 99.3 1.6E-09 3.5E-14 103.6 26.8 204 22-269 24-231 (385)
359 COG0112 GlyA Glycine/serine hy 99.3 1.4E-09 3.1E-14 107.7 27.4 300 22-411 34-344 (413)
360 COG3033 TnaA Tryptophanase [Am 99.3 1.5E-09 3.2E-14 105.7 26.5 318 22-415 56-398 (471)
361 PRK12566 glycine dehydrogenase 99.3 1.4E-09 3.1E-14 120.4 29.5 146 47-202 530-682 (954)
362 TIGR00461 gcvP glycine dehydro 99.3 1.4E-09 3.1E-14 121.1 29.5 147 46-202 516-669 (939)
363 PRK15399 lysine decarboxylase 99.3 1.5E-09 3.4E-14 117.8 28.8 175 51-252 193-378 (713)
364 KOG1357|consensus 99.3 3.5E-11 7.6E-16 120.1 14.6 314 54-507 179-506 (519)
365 PRK12462 phosphoserine aminotr 99.2 7E-09 1.5E-13 105.3 26.2 302 22-413 11-330 (364)
366 TIGR01365 serC_2 phosphoserine 99.1 1.1E-08 2.4E-13 104.8 23.2 194 22-266 10-208 (374)
367 TIGR03811 tyr_de_CO2_Ent tyros 99.1 1E-06 2.2E-11 95.3 37.1 225 22-265 91-406 (608)
368 PF06838 Met_gamma_lyase: Meth 99.1 1E-07 2.3E-12 94.0 26.4 202 29-269 28-250 (403)
369 COG3844 Kynureninase [Amino ac 99.0 7.1E-08 1.5E-12 93.2 21.2 307 58-503 81-402 (407)
370 PLN02414 glycine dehydrogenase 99.0 3.1E-07 6.7E-12 103.9 29.4 187 26-264 117-320 (993)
371 COG1982 LdcC Arginine/lysine/o 98.9 3.3E-07 7.2E-12 96.2 24.7 166 55-251 72-242 (557)
372 PLN02994 1-aminocyclopropane-1 98.9 4.5E-09 9.8E-14 93.7 9.4 64 49-116 88-153 (153)
373 PRK05367 glycine dehydrogenase 98.9 6.8E-07 1.5E-11 101.5 27.8 174 43-265 102-293 (954)
374 KOG1383|consensus 98.9 4.2E-07 9.2E-12 91.9 21.4 185 54-261 117-308 (491)
375 KOG1358|consensus 98.8 2.7E-07 5.8E-12 91.2 18.8 206 27-269 110-327 (467)
376 COG1921 SelA Selenocysteine sy 98.8 1.7E-06 3.7E-11 87.1 23.1 220 9-269 20-248 (395)
377 COG1003 GcvP Glycine cleavage 98.6 6.9E-05 1.5E-09 75.6 26.2 161 52-241 104-270 (496)
378 TIGR00461 gcvP glycine dehydro 98.4 9.6E-05 2.1E-09 83.2 26.8 174 43-264 90-280 (939)
379 PF05889 SLA_LP_auto_ag: Solub 98.4 2.9E-05 6.3E-10 78.3 19.6 190 59-269 58-250 (389)
380 KOG1403|consensus 98.4 5.5E-05 1.2E-09 72.6 19.6 225 27-281 63-320 (452)
381 KOG0629|consensus 98.3 0.00017 3.7E-09 72.5 22.9 266 49-363 133-418 (510)
382 COG4100 Cystathionine beta-lya 98.3 5.4E-05 1.2E-09 72.7 17.5 181 49-265 60-257 (416)
383 KOG0628|consensus 98.3 0.0022 4.7E-08 65.5 29.2 152 49-205 105-279 (511)
384 COG1932 SerC Phosphoserine ami 98.2 0.00021 4.5E-09 71.0 20.8 284 22-377 12-308 (365)
385 PF02347 GDC-P: Glycine cleava 98.2 0.00028 6E-09 73.0 21.8 131 44-196 92-231 (429)
386 PF03841 SelA: L-seryl-tRNA se 98.1 8.9E-07 1.9E-11 88.4 2.0 213 20-267 12-236 (367)
387 KOG1405|consensus 98.0 0.00014 2.9E-09 71.5 14.9 115 143-276 255-372 (484)
388 KOG3843|consensus 98.0 0.00054 1.2E-08 64.8 16.7 181 70-268 70-251 (432)
389 COG0403 GcvP Glycine cleavage 97.7 0.021 4.5E-07 58.1 24.9 132 43-196 101-245 (450)
390 KOG2467|consensus 97.7 0.0069 1.5E-07 60.1 20.8 144 78-253 109-264 (477)
391 PRK12566 glycine dehydrogenase 97.1 0.081 1.7E-06 60.0 21.5 125 43-196 105-242 (954)
392 PLN02672 methionine S-methyltr 96.0 0.18 3.9E-06 58.3 16.1 210 30-268 406-627 (1082)
393 KOG2790|consensus 95.8 1.2 2.5E-05 43.4 17.7 202 22-264 14-225 (370)
394 KOG2040|consensus 95.7 3.8 8.2E-05 44.3 22.8 143 48-202 570-721 (1001)
395 KOG3846|consensus 91.8 14 0.00031 36.5 18.1 163 27-202 80-255 (465)
396 COG2102 Predicted ATPases of P 91.5 7.8 0.00017 36.5 14.1 156 79-269 4-170 (223)
397 KOG1201|consensus 83.4 39 0.00085 33.4 14.0 141 74-245 36-182 (300)
398 PRK08265 short chain dehydroge 76.8 45 0.00099 32.0 12.5 101 76-185 6-108 (261)
399 KOG1465|consensus 76.0 86 0.0019 31.1 13.5 153 31-200 103-273 (353)
400 KOG2040|consensus 75.2 1.4E+02 0.003 33.0 21.0 73 104-196 205-281 (1001)
401 PF05368 NmrA: NmrA-like famil 71.3 38 0.00082 31.9 10.2 96 79-195 1-98 (233)
402 PF00106 adh_short: short chai 70.7 63 0.0014 28.3 11.0 100 78-185 2-109 (167)
403 PF10087 DUF2325: Uncharacteri 68.5 48 0.001 26.7 8.8 70 112-196 10-80 (97)
404 PRK06425 histidinol-phosphate 66.7 14 0.0003 37.3 6.3 43 457-501 289-331 (332)
405 TIGR01470 cysG_Nterm siroheme 66.2 83 0.0018 29.4 11.0 101 74-204 7-109 (205)
406 PRK08535 translation initiatio 66.1 1.2E+02 0.0025 30.5 12.7 105 74-196 118-227 (310)
407 COG1105 FruK Fructose-1-phosph 64.8 95 0.0021 31.1 11.5 59 139-200 109-168 (310)
408 TIGR00290 MJ0570_dom MJ0570-re 63.0 1E+02 0.0022 29.4 10.9 100 79-196 4-116 (223)
409 cd02742 GH20_hexosaminidase Be 62.9 17 0.00038 36.2 6.2 71 117-197 21-91 (303)
410 TIGR00511 ribulose_e2b2 ribose 62.4 1.6E+02 0.0034 29.5 12.7 104 75-196 114-222 (301)
411 TIGR00524 eIF-2B_rel eIF-2B al 61.4 1.1E+02 0.0023 30.7 11.4 107 75-197 117-237 (303)
412 cd06568 GH20_SpHex_like A subg 61.2 15 0.00033 37.2 5.4 72 117-197 23-94 (329)
413 cd06562 GH20_HexA_HexB-like Be 61.0 15 0.00033 37.5 5.4 67 117-197 23-89 (348)
414 cd06570 GH20_chitobiase-like_1 60.1 15 0.00033 36.9 5.1 64 118-197 24-87 (311)
415 PRK05872 short chain dehydroge 59.1 1.5E+02 0.0033 29.0 12.2 102 75-185 8-114 (296)
416 PRK11889 flhF flagellar biosyn 59.1 2.4E+02 0.0051 29.6 14.0 102 84-200 253-362 (436)
417 PRK08862 short chain dehydroge 58.9 1.3E+02 0.0029 28.3 11.2 80 77-165 6-90 (227)
418 COG0373 HemA Glutamyl-tRNA red 58.8 2.3E+02 0.005 29.7 13.4 93 79-199 182-274 (414)
419 COG0031 CysK Cysteine synthase 58.4 1E+02 0.0022 30.8 10.3 78 54-134 39-117 (300)
420 PRK12936 3-ketoacyl-(acyl-carr 57.8 1.6E+02 0.0035 27.4 12.4 80 77-165 7-87 (245)
421 PRK12481 2-deoxy-D-gluconate 3 57.7 1.6E+02 0.0034 28.0 11.8 80 76-164 8-89 (251)
422 PRK06483 dihydromonapterin red 56.5 1.7E+02 0.0037 27.3 11.7 76 78-164 4-80 (236)
423 PRK07063 short chain dehydroge 55.7 1.9E+02 0.0041 27.5 12.5 101 76-185 7-115 (260)
424 PRK06500 short chain dehydroge 55.2 1.8E+02 0.004 27.2 12.4 80 77-165 7-87 (249)
425 COG4221 Short-chain alcohol de 55.1 2E+02 0.0043 27.8 11.3 99 78-185 7-110 (246)
426 PF13460 NAD_binding_10: NADH( 55.0 89 0.0019 27.9 9.1 89 79-191 1-89 (183)
427 PRK08339 short chain dehydroge 55.0 2E+02 0.0043 27.6 12.2 99 77-185 9-114 (263)
428 PRK06194 hypothetical protein; 54.6 2.1E+02 0.0045 27.6 12.5 80 77-165 7-90 (287)
429 TIGR00289 conserved hypothetic 52.7 2E+02 0.0043 27.4 11.0 102 79-196 4-116 (222)
430 PF01008 IF-2B: Initiation fac 52.7 89 0.0019 30.6 9.2 107 74-197 105-216 (282)
431 TIGR03573 WbuX N-acetyl sugar 51.5 2.3E+02 0.0049 28.8 12.1 144 29-202 22-171 (343)
432 PF01902 ATP_bind_4: ATP-bindi 50.1 1.4E+02 0.0031 28.2 9.6 100 79-196 4-116 (218)
433 PLN02591 tryptophan synthase 49.8 2.5E+02 0.0055 27.2 12.1 96 88-196 94-194 (250)
434 PF08659 KR: KR domain; Inter 49.6 61 0.0013 29.4 7.0 79 79-165 3-88 (181)
435 PRK08589 short chain dehydroge 49.5 2.5E+02 0.0054 27.0 12.5 79 77-165 7-89 (272)
436 PRK06139 short chain dehydroge 48.8 2.4E+02 0.0053 28.3 11.9 102 75-185 6-113 (330)
437 KOG1200|consensus 48.6 2.3E+02 0.0051 26.5 10.3 100 78-186 16-120 (256)
438 PRK05867 short chain dehydroge 48.5 2.4E+02 0.0052 26.6 12.4 81 76-165 9-93 (253)
439 cd00408 DHDPS-like Dihydrodipi 48.3 2.5E+02 0.0055 27.3 11.7 54 142-199 107-160 (281)
440 PF02662 FlpD: Methyl-viologen 48.2 66 0.0014 27.5 6.4 58 125-191 28-90 (124)
441 PRK04296 thymidine kinase; Pro 48.1 1.2E+02 0.0026 27.8 8.8 99 86-203 17-118 (190)
442 PRK07478 short chain dehydroge 48.1 2.4E+02 0.0053 26.5 11.8 80 77-165 7-90 (254)
443 PF00728 Glyco_hydro_20: Glyco 47.9 21 0.00047 36.1 4.1 69 118-197 24-92 (351)
444 PRK05876 short chain dehydroge 47.8 2.7E+02 0.0058 26.9 12.3 78 77-163 7-88 (275)
445 cd00640 Trp-synth-beta_II Tryp 47.4 2E+02 0.0042 27.4 10.5 77 54-134 28-105 (244)
446 cd01994 Alpha_ANH_like_IV This 47.1 2.4E+02 0.0051 26.1 11.8 106 79-196 3-119 (194)
447 KOG0369|consensus 47.0 49 0.0011 36.3 6.4 105 80-203 86-196 (1176)
448 TIGR02313 HpaI-NOT-DapA 2,4-di 46.8 1.9E+02 0.0041 28.7 10.5 53 143-198 111-164 (294)
449 PRK07109 short chain dehydroge 46.6 2.9E+02 0.0063 27.7 12.1 80 76-164 8-91 (334)
450 cd06569 GH20_Sm-chitobiase-lik 46.3 47 0.001 35.2 6.3 81 117-197 27-116 (445)
451 COG1184 GCD2 Translation initi 46.2 3.2E+02 0.0069 27.3 12.6 105 74-196 117-226 (301)
452 PRK07067 sorbitol dehydrogenas 45.7 2.7E+02 0.0058 26.3 12.1 80 77-165 7-87 (257)
453 TIGR03679 arCOG00187 arCOG0018 45.6 2.7E+02 0.0058 26.3 11.2 102 80-196 2-117 (218)
454 PRK06128 oxidoreductase; Provi 45.1 2.6E+02 0.0056 27.4 11.3 100 77-185 56-164 (300)
455 PF02571 CbiJ: Precorrin-6x re 44.9 93 0.002 30.1 7.7 94 78-195 2-97 (249)
456 PRK05717 oxidoreductase; Valid 44.9 2.8E+02 0.006 26.2 12.2 80 77-165 11-91 (255)
457 PRK08057 cobalt-precorrin-6x r 44.7 1.5E+02 0.0032 28.7 9.1 93 77-196 3-97 (248)
458 cd01018 ZntC Metal binding pro 44.6 3E+02 0.0066 26.6 15.3 74 106-196 172-245 (266)
459 smart00642 Aamy Alpha-amylase 44.6 95 0.002 27.9 7.3 28 176-203 68-95 (166)
460 cd06563 GH20_chitobiase-like T 44.5 46 0.00099 34.1 5.8 78 118-197 24-105 (357)
461 PRK07024 short chain dehydroge 44.1 2.9E+02 0.0062 26.2 12.0 79 77-164 3-84 (257)
462 PRK12859 3-ketoacyl-(acyl-carr 44.0 2.2E+02 0.0048 27.0 10.4 102 75-185 5-125 (256)
463 PRK07231 fabG 3-ketoacyl-(acyl 43.8 2.8E+02 0.006 25.9 11.9 82 76-166 5-89 (251)
464 PRK08063 enoyl-(acyl carrier p 43.7 2.8E+02 0.006 26.0 11.3 81 77-166 5-90 (250)
465 PRK07523 gluconate 5-dehydroge 43.3 2.9E+02 0.0063 26.0 12.6 81 76-165 10-94 (255)
466 cd01561 CBS_like CBS_like: Thi 42.8 3E+02 0.0065 27.0 11.3 55 77-134 54-108 (291)
467 cd01562 Thr-dehyd Threonine de 42.8 2E+02 0.0044 28.3 10.1 54 77-133 66-119 (304)
468 PRK05678 succinyl-CoA syntheta 42.2 1E+02 0.0022 30.7 7.6 71 110-197 50-122 (291)
469 TIGR02026 BchE magnesium-proto 42.0 1.6E+02 0.0034 31.7 9.7 65 121-198 32-99 (497)
470 PF03652 UPF0081: Uncharacteri 42.0 85 0.0018 27.2 6.3 59 140-202 37-99 (135)
471 cd06448 L-Ser-dehyd Serine deh 41.9 3.7E+02 0.008 26.9 12.7 86 77-173 52-137 (316)
472 PRK08263 short chain dehydroge 41.7 3.2E+02 0.007 26.2 11.5 79 78-165 5-84 (275)
473 PRK09242 tropinone reductase; 41.7 3.1E+02 0.0067 25.9 12.5 100 77-185 10-117 (257)
474 PRK06484 short chain dehydroge 41.7 2.7E+02 0.0058 29.8 11.6 80 77-165 6-86 (520)
475 PRK06079 enoyl-(acyl carrier p 41.6 2.4E+02 0.0053 26.7 10.2 79 76-164 7-89 (252)
476 cd01020 TroA_b Metal binding p 41.6 2.6E+02 0.0057 27.0 10.5 78 106-195 155-236 (264)
477 PLN02970 serine racemase 41.3 2E+02 0.0043 29.0 9.8 54 77-133 76-129 (328)
478 PRK05854 short chain dehydroge 41.1 2.8E+02 0.0062 27.4 10.9 79 77-164 15-99 (313)
479 PRK07097 gluconate 5-dehydroge 41.0 3.2E+02 0.007 25.9 12.4 81 76-165 10-94 (265)
480 PRK05855 short chain dehydroge 40.6 4.9E+02 0.011 27.9 16.0 100 77-185 316-421 (582)
481 PRK02261 methylaspartate mutas 40.5 2.3E+02 0.0051 24.5 8.8 57 119-190 25-81 (137)
482 PRK08335 translation initiatio 40.4 3.7E+02 0.008 26.5 12.8 105 74-196 107-216 (275)
483 PRK07424 bifunctional sterol d 40.2 2.9E+02 0.0063 28.9 11.0 94 76-185 178-271 (406)
484 COG0514 RecQ Superfamily II DN 40.0 1.7E+02 0.0037 32.1 9.4 145 78-267 37-187 (590)
485 COG1648 CysG Siroheme synthase 40.0 2.5E+02 0.0054 26.4 9.5 90 74-194 10-100 (210)
486 PRK06841 short chain dehydroge 39.9 3.2E+02 0.007 25.6 12.3 81 76-165 15-96 (255)
487 PRK08277 D-mannonate oxidoredu 39.9 3.5E+02 0.0075 25.9 12.3 81 76-165 10-94 (278)
488 COG2870 RfaE ADP-heptose synth 39.8 1.1E+02 0.0025 31.6 7.5 112 82-204 72-184 (467)
489 TIGR01019 sucCoAalpha succinyl 39.6 1.1E+02 0.0024 30.3 7.4 72 111-199 49-122 (286)
490 PRK08246 threonine dehydratase 39.6 3.9E+02 0.0086 26.6 11.6 73 53-132 49-121 (310)
491 PF02310 B12-binding: B12 bind 39.4 2.2E+02 0.0047 23.4 8.7 63 119-196 22-86 (121)
492 PRK07791 short chain dehydroge 39.3 3.7E+02 0.008 26.1 12.4 79 77-164 7-98 (286)
493 PRK06484 short chain dehydroge 39.0 3.1E+02 0.0067 29.3 11.5 77 78-163 271-348 (520)
494 cd00952 CHBPH_aldolase Trans-o 38.9 4.1E+02 0.0088 26.5 11.9 89 79-199 80-172 (309)
495 PRK08278 short chain dehydroge 38.8 3.6E+02 0.0079 25.9 12.4 80 77-165 7-97 (273)
496 PRK06114 short chain dehydroge 38.8 3.4E+02 0.0074 25.6 12.1 80 76-164 8-92 (254)
497 PRK07825 short chain dehydroge 38.6 3.6E+02 0.0078 25.8 11.8 79 77-165 6-85 (273)
498 PRK03170 dihydrodipicolinate s 38.4 3.1E+02 0.0068 26.9 10.6 51 144-198 113-163 (292)
499 PRK12743 oxidoreductase; Provi 38.2 3.5E+02 0.0076 25.5 11.0 79 78-165 4-87 (256)
500 PF00290 Trp_syntA: Tryptophan 37.3 4E+02 0.0087 25.9 12.2 95 89-196 104-203 (259)
No 1
>PLN02231 alanine transaminase
Probab=100.00 E-value=3.2e-56 Score=474.80 Aligned_cols=413 Identities=48% Similarity=0.833 Sum_probs=351.1
Q ss_pred chHHHHHHHHhhcCCCCC----CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcE
Q psy13922 4 VFSLSLQVLALVSLPQLF----DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDV 79 (509)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~----~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i 79 (509)
+++++|+++.+++.|..+ +.+.||.++++++.+.+.+..+...++|+++.|.+++|++|++++.+++|+++++++|
T Consensus 115 ~~~~~r~v~~~~~~p~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I 194 (534)
T PLN02231 115 PITFFREVLALCDHPSLLDKSETHGLFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDI 194 (534)
T ss_pred ccHHHHHHHHhccCCccCCCCCccccCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccE
Confidence 578999999999988887 4667899999998888876544456679999999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhc-CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-C
Q psy13922 80 ILSAGASDGIKSVLKLLIE-DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-C 157 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~ 157 (509)
++|+|+++++.++++.++. +|| .|+++.|+|..|...++..|.+++.++++++++|++|++.|++.++..... .
T Consensus 195 ~iT~Ga~~ai~~~~~~l~~~~gd----~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~ 270 (534)
T PLN02231 195 FLTDGASPAVHMMMQLLIRSEKD----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGI 270 (534)
T ss_pred EEeCCHHHHHHHHHHHhccCCCC----EEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCC
Confidence 9999999999999999985 688 999999999999999999999999999988778999999999999764322 2
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 158 NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
++++|+++|||||||.++|.+++++|+++|+++|++||+||+|.++.|.++..+.++.++..+++..+.+.++|+++|||
T Consensus 271 ~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~S 350 (534)
T PLN02231 271 TVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVS 350 (534)
T ss_pred CeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccC
Confidence 68999999999999999999999999999999999999999999999964446677777755443222245699999999
Q ss_pred cccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhh
Q psy13922 238 KGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMD 317 (509)
Q Consensus 238 K~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 317 (509)
|.+.|+||+|+||+++.+.++++++.+.+..+...+++.. +|.++.
T Consensus 351 K~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~----------------------------------~Q~~~~ 396 (534)
T PLN02231 351 KGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNIS----------------------------------GQILAS 396 (534)
T ss_pred cccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChH----------------------------------HHHHHH
Confidence 9754789999999974334789999998876644556666 777777
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHH
Q psy13922 318 CVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (509)
.++++++.+++.|+.+.++.+.+++.++++++.+.+.|++++|+.+.+|+|+||+|+++++|..........+..++..+
T Consensus 397 ~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~ 476 (534)
T PLN02231 397 LVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFY 476 (534)
T ss_pred HHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHH
Confidence 78876666678899998888999999999999999999999899999999999999888877654333344455556667
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
+..+++++||.++||+.|+.. ++. .
T Consensus 477 ~~~Ll~~~GV~vvPGs~Fg~~-----------------------------------------------~g~--------~ 501 (534)
T PLN02231 477 CKRLLNATGIVVVPGSGFGQV-----------------------------------------------PGT--------W 501 (534)
T ss_pred HHHHHHhcCEEEeCCcccCCC-----------------------------------------------CCC--------C
Confidence 788999999999999988762 232 3
Q ss_pred eEEEEeecChHHHHHHHHHHHHHHHHHHhhcC
Q psy13922 478 HFRTTILPQPEKLKAMLEKFREFHEEFLAKYK 509 (509)
Q Consensus 478 ~~Rls~~~~~~~i~~~~~~l~~~~~~~~~~~~ 509 (509)
+||++|+.++++|+++++||+++++++.+||+
T Consensus 502 ~~Rit~~~~~e~l~eal~RL~~~~~~~~~~~~ 533 (534)
T PLN02231 502 HFRCTILPQEDKIPAIVSRLTEFHKSFMDEFR 533 (534)
T ss_pred eEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999996
No 2
>KOG0258|consensus
Probab=100.00 E-value=9.5e-55 Score=419.19 Aligned_cols=411 Identities=60% Similarity=1.032 Sum_probs=381.4
Q ss_pred CchHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEe
Q psy13922 3 PVFSLSLQVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILS 82 (509)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t 82 (509)
-|++++||++.+++.|.+++.|.||.+++++..+.+..+.+ ..+.|+.+.|.+-+|+.||+|+.++.|.+.++++|++|
T Consensus 64 ~PiTF~RQvlal~~~p~lLd~~~fp~Dai~RA~~~L~~~gG-s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT 142 (475)
T KOG0258|consen 64 KPITFLRQVLALCQYPELLDSPEFPTDAIKRAKRILNDCGG-SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLT 142 (475)
T ss_pred CChhHHHHHHHHhcChhhcCCCCCCHHHHHHHHHHHHhcCC-cccccccccCChhHHHHHHHHHHhccCCCCCHHHeeec
Confidence 37889999999999999999999999999999999999877 78889999999999999999999999988999999999
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEE
Q psy13922 83 AGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAI 162 (509)
Q Consensus 83 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~i 162 (509)
+|++.++..++..++.. +++.|++|.|.|+-|...+..+|...+.+.++++.+|.+|.++|++.+.++.++.+++++
T Consensus 143 ~GAS~ai~~il~l~~~~---~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~l 219 (475)
T KOG0258|consen 143 TGASPAIRSILSLLIAG---KKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRAL 219 (475)
T ss_pred CCCcHHHHHHHHHHhcC---CCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEE
Confidence 99999999999998754 345999999999999999999999999999999999999999999999998877899999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCC-CceeEEEEecccccC
Q psy13922 163 VIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYK-SMELASFMSCSKGYM 241 (509)
Q Consensus 163 vi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~ 241 (509)
++.||.||||.+++++.+++|+.+|.++++.++.||+|.+..|.++.+|.|+.....++++.++ .+..++++|.||.+.
T Consensus 220 vvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~ 299 (475)
T KOG0258|consen 220 VVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYM 299 (475)
T ss_pred EEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccce
Confidence 9999999999999999999999999999999999999999999988899999999999998876 778899999999999
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccC
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVN 321 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 321 (509)
|-.|.|.||+-+++.+++..+.+.+..+...+++.. +|+.+....+
T Consensus 300 gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~----------------------------------GQ~~vdl~Vn 345 (475)
T KOG0258|consen 300 GECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVS----------------------------------GQKLVDLVVN 345 (475)
T ss_pred eeecccCCeeecccCChhHHHHHHHHHhhhhcCCcc----------------------------------chhhhceecC
Confidence 999999999998888999999999998888888888 9999999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHH
Q psy13922 322 PPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFEL 401 (509)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 401 (509)
++.+++.+|+.+..+...+...++.+...+.+.++.++|+.+.+++|.||++.++.+|.++...+...|+.+++.++.++
T Consensus 346 PP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~L 425 (475)
T KOG0258|consen 346 PPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKL 425 (475)
T ss_pred CCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888888888887777777777
Q ss_pred HhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEE
Q psy13922 402 LERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRT 481 (509)
Q Consensus 402 l~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rl 481 (509)
|+..||.++||+ ||||.+|+++||.
T Consensus 426 Le~tGIcvVPGS-------------------------------------------------------GFGQ~~GtyH~R~ 450 (475)
T KOG0258|consen 426 LEATGICVVPGS-------------------------------------------------------GFGQKEGTYHFRT 450 (475)
T ss_pred HHhcCeEEecCC-------------------------------------------------------CCCCCCceeEEEE
Confidence 777777777554 5666788889999
Q ss_pred EeecChHHHHHHHHHHHHHHHHHHhhcC
Q psy13922 482 TILPQPEKLKAMLEKFREFHEEFLAKYK 509 (509)
Q Consensus 482 s~~~~~~~i~~~~~~l~~~~~~~~~~~~ 509 (509)
++-.+. + +.+++++++..+|..+|+
T Consensus 451 TiLp~~--~-~~i~~~~~fH~~f~~~Y~ 475 (475)
T KOG0258|consen 451 TILPPG--L-EIIEKFKKFHAEFMDEYR 475 (475)
T ss_pred eecCch--h-HHHHHHHHHHHHHHHhhC
Confidence 998655 5 889999999999999986
No 3
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.6e-53 Score=452.75 Aligned_cols=412 Identities=51% Similarity=0.906 Sum_probs=340.5
Q ss_pred chHHHHHHHHhhcCCCCCCCC----CCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcE
Q psy13922 4 VFSLSLQVLALVSLPQLFDDP----RFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDV 79 (509)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~----~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i 79 (509)
+.+++|+++.....|..+..+ .+|..+++++.++++.... ....|+++.|.++||+++++++++++|+++++++|
T Consensus 63 ~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I 141 (481)
T PTZ00377 63 PLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGG-GTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDI 141 (481)
T ss_pred CchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCC-cccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhE
Confidence 467899999988888877433 3788999998887776432 34559999999999999999999989999999999
Q ss_pred EEeCCHHHHHHHHHHHhh-cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-C
Q psy13922 80 ILSAGASDGIKSVLKLLI-EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-C 157 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~-~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~ 157 (509)
++|+|+++++.+++++++ ++|| .|+++.|+|..|...++..|++++.++++++.+|.+|++.|++.+++..+. .
T Consensus 142 ~it~Ga~~al~~~~~~l~~~~gD----~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 217 (481)
T PTZ00377 142 FLTDGASSGIKLLLQLLIGDPSD----GVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGI 217 (481)
T ss_pred EEcCCHHHHHHHHHHHhccCCCC----EEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCC
Confidence 999999999999999998 6898 999999999999999999999999999987778999999999998753221 2
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCC-CceeEEEEec
Q psy13922 158 NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYK-SMELASFMSC 236 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vi~i~S~ 236 (509)
++++|++++||||||.++|.+++++|+++|+++|++||+||+|.++.|+++.++.++.++..++...+. ..++|+++||
T Consensus 218 ~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~ 297 (481)
T PTZ00377 218 TPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHST 297 (481)
T ss_pred CeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecC
Confidence 689999999999999999999999999999999999999999999998544355666655444432211 2369999999
Q ss_pred ccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchh
Q psy13922 237 SKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVM 316 (509)
Q Consensus 237 SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 316 (509)
||.+.|+||+|+||+++.+.++++++++.+......+++.+ +|.++
T Consensus 298 SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~----------------------------------~Q~a~ 343 (481)
T PTZ00377 298 SKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVV----------------------------------GQLMT 343 (481)
T ss_pred CcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChH----------------------------------HHHHH
Confidence 99732799999999973223899999998877655567777 67777
Q ss_pred hcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHH
Q psy13922 317 DCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVL 396 (509)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (509)
..++++...+++.++.+.++++++++.++++++.+.+.|++++|+.+..|+||||+|+++++|..........++.++..
T Consensus 344 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~ 423 (481)
T PTZ00377 344 GLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVL 423 (481)
T ss_pred HHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHH
Confidence 76666544445667778888888888999999999999999989999999999999988877765443344445555666
Q ss_pred HHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCc
Q psy13922 397 YAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGT 476 (509)
Q Consensus 397 ~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (509)
++..+++++||.++||+.|+.. ++.+
T Consensus 424 ~~~~ll~~~gV~v~pG~~F~~~-----------------------------------------------~~~~------- 449 (481)
T PTZ00377 424 YCLELLESTGIVVVPGSGFGQK-----------------------------------------------PGTY------- 449 (481)
T ss_pred HHHHHHHHcCEEEeCCcccCCC-----------------------------------------------CCCC-------
Confidence 7789999999999999998751 2323
Q ss_pred eeEEEEeecChHHHHHHHHHHHHHHHHHHhhcC
Q psy13922 477 YHFRTTILPQPEKLKAMLEKFREFHEEFLAKYK 509 (509)
Q Consensus 477 ~~~Rls~~~~~~~i~~~~~~l~~~~~~~~~~~~ 509 (509)
+||+|++.+++++++++++|+++++++.+||.
T Consensus 450 -~~Rls~~~~~e~l~~~l~rl~~~~~~~~~~~~ 481 (481)
T PTZ00377 450 -HFRITILPPEEQIEEMVKKIKEFHESFMKKYG 481 (481)
T ss_pred -EEEEEECCCHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999998888999999999999999999984
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-53 Score=439.90 Aligned_cols=351 Identities=30% Similarity=0.500 Sum_probs=306.7
Q ss_pred CCCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCc-EEEeCCHHHHHHHHHHHhh
Q psy13922 21 FDDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQD-VILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 21 ~~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~-i~~t~G~~~al~~~~~~l~ 97 (509)
+|.|++ |+.+++++.+++.+ +.. +|.+..|.++||+++++++.+++|..+++++ |++|+|+++|+.+++.++.
T Consensus 35 iG~Pd~~~p~~i~~a~~~a~~~---~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~ 110 (393)
T COG0436 35 IGEPDFPTPEHIIEAAIEALEE---GGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALL 110 (393)
T ss_pred CCCCCCCCCHHHHHHHHHHHhc---ccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhc
Confidence 488877 67899999999998 333 5889999999999999999999998988886 9999999999999999999
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCC-CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDES-KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
++|| +|++++|.|..|...+..+|++++.++++.+ .+|.+|++.|++++++ ++|+|++++||||||.+++
T Consensus 111 ~pGD----eVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-----ktk~i~ln~P~NPTGav~~ 181 (393)
T COG0436 111 NPGD----EVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-----KTKAIILNSPNNPTGAVYS 181 (393)
T ss_pred CCCC----EEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-----cceEEEEeCCCCCcCcCCC
Confidence 9999 9999999999999999999999999998655 4899999999999998 8999999999999999999
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
++++++|+++|++||++||+||+|.++.|++. .+.++.++... ..++|+++||||.| |++|||+||++ +
T Consensus 182 ~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~-~~~s~~~~~~~------~~~~i~i~s~SK~~-~mtGwRvG~~v---~ 250 (393)
T COG0436 182 KEELKAIVELAREHDIIIISDEIYEELVYDGA-EHPSILELAGA------RDRTITINSFSKTY-GMTGWRIGWVV---G 250 (393)
T ss_pred HHHHHHHHHHHHHcCeEEEEehhhhhcccCCC-CcCCHhhcCCC------cceEEEEecccccc-cccccceeEee---c
Confidence 99999999999999999999999999999853 46677665432 23499999999999 79999999998 5
Q ss_pred C-HHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHH
Q psy13922 257 D-PGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFS 334 (509)
Q Consensus 257 ~-~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 334 (509)
+ +++++.+.+++. ...+++.+ .|.+...+++..+ . .
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~----------------------------------~Q~aa~~aL~~~~-------~-~ 288 (393)
T COG0436 251 PPEELIAALRKLKSYLTSCAPTP----------------------------------AQYAAIAALNGPQ-------S-D 288 (393)
T ss_pred ChHHHHHHHHHHHHhcccCCCHH----------------------------------HHHHHHHHhcCcc-------c-h
Confidence 6 889999987777 56688888 6666666655321 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 335 REKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 335 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
.+.+.+++.+++|++.+.+.|.+++|+.+.. |+|+||+|++++. ..++.+|+..+|+++||.++||.
T Consensus 289 ~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~------------~~d~~~f~~~Ll~~~gV~v~PG~ 356 (393)
T COG0436 289 EVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPE------------LLDSEEFAKKLLEEAGVAVVPGS 356 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCC------------CCCHHHHHHHHHHhCCEEEeccc
Confidence 3477788999999999999999998899887 8899999988862 24788899999999999999999
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHH
Q psy13922 414 GFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAM 493 (509)
Q Consensus 414 ~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~ 493 (509)
.|+.. .|.+ |||+|++.+.+.++++
T Consensus 357 ~Fg~~-----------------------------------------------~g~~--------~vRis~~~~~~~l~~a 381 (393)
T COG0436 357 GFGEP-----------------------------------------------PGEG--------YVRLSLATSEETLEEA 381 (393)
T ss_pred ccCCC-----------------------------------------------CCCC--------eEEEEEecCHHHHHHH
Confidence 99982 2555 9999999888999999
Q ss_pred HHHHHHHHHHH
Q psy13922 494 LEKFREFHEEF 504 (509)
Q Consensus 494 ~~~l~~~~~~~ 504 (509)
+++|.++++.+
T Consensus 382 ~~rl~~~~~~~ 392 (393)
T COG0436 382 LRRLARFLAEY 392 (393)
T ss_pred HHHHHHHHHhc
Confidence 99999998754
No 5
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2.6e-47 Score=397.62 Aligned_cols=363 Identities=20% Similarity=0.321 Sum_probs=299.2
Q ss_pred HHHHHHHHhhcCCCCC----CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-c
Q psy13922 6 SLSLQVLALVSLPQLF----DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-D 78 (509)
Q Consensus 6 ~~~~~~~~~~~~~~~~----~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~ 78 (509)
+.++.++..+..++.+ |.|++ |+.+.+++.+++.+ . ..+|++..|.++||+++++++++++|++++++ +
T Consensus 42 ~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~---~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~ 117 (413)
T PLN00175 42 TIFTQMSSLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRD---G-KNQYARGFGVPELNSAIAERFKKDTGLVVDPEKE 117 (413)
T ss_pred CHHHHHHHHhhcCCeEecCCCCCCCCCCHHHHHHHHHHHhc---C-CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 4566666666555543 66665 66788888888876 2 34599999999999999999999999888887 7
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCC
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCN 158 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~ 158 (509)
|++|+|+++++..++..++++|| .|++++|+|..+...++..|++++.+++++++ |.+|++.|++.+.. +
T Consensus 118 I~vt~G~~~al~~~~~~l~~~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l~~~~~~-----~ 187 (413)
T PLN00175 118 VTVTSGCTEAIAATILGLINPGD----EVILFAPFYDSYEATLSMAGAKIKTVTLRPPD-FAVPEDELKAAFTS-----K 187 (413)
T ss_pred EEEeCCHHHHHHHHHHHhCCCCC----EEEEeCCCchhHHHHHHHcCCEEEEEECCccc-CCCCHHHHHHhcCc-----C
Confidence 99999999999999999999998 99999999999999999999999999997653 78999999999876 7
Q ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 159 PRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
+++|++++||||||.++|.+++++|+++|++|+++||+||+|.++.+++ .+.++.++.. . ..++|+++||||
T Consensus 188 ~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~--~~~s~~~~~~-~-----~~~vi~i~SfSK 259 (413)
T PLN00175 188 TRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG--DHISMASLPG-M-----YERTVTMNSLGK 259 (413)
T ss_pred ceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC--cccChhhCCC-C-----cCcEEEEecchh
Confidence 9999999999999999999999999999999999999999999998864 3345544321 1 235999999999
Q ss_pred ccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhh
Q psy13922 239 GYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMD 317 (509)
Q Consensus 239 ~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 317 (509)
.| |++|+|+||++ +++++++.+.+... ...+.+.+ .|.++.
T Consensus 260 ~~-~~~G~RiG~~v---~~~~l~~~l~~~~~~~~~~~s~~----------------------------------~Q~a~~ 301 (413)
T PLN00175 260 TF-SLTGWKIGWAI---APPHLTWGVRQAHSFLTFATATP----------------------------------MQWAAV 301 (413)
T ss_pred hc-cCcchheeeeE---eCHHHHHHHHHHHhhccCCCCHH----------------------------------HHHHHH
Confidence 99 79999999998 79999999988765 34567777 565555
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHH
Q psy13922 318 CVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (509)
.+++. ...++++.++.++++++.+.+.|++. |+.+.+|+|++|+|+++. + .++.++.++
T Consensus 302 ~~l~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~~f~~~~~~-~---------~~~~~~~~~ 360 (413)
T PLN00175 302 AALRA----------PESYYEELKRDYSAKKDILVEGLKEV-GFKVYPSSGTYFVMVDHT-P---------FGFENDIAF 360 (413)
T ss_pred HHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecc-c---------cCCCCHHHH
Confidence 55541 12347888999999999999999998 888889999999998763 1 133345677
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
+..+++++||.+.||..|+.... .+.+
T Consensus 361 ~~~ll~~~gV~v~pg~~F~~~~~---------------------------------------------~~~~-------- 387 (413)
T PLN00175 361 CEYLIEEVGVAAIPPSVFYLNPE---------------------------------------------DGKN-------- 387 (413)
T ss_pred HHHHHHhCCEEEeCchHhCCCCC---------------------------------------------CCCC--------
Confidence 78888889999999998864100 1222
Q ss_pred eEEEEeecChHHHHHHHHHHHHHHH
Q psy13922 478 HFRTTILPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 478 ~~Rls~~~~~~~i~~~~~~l~~~~~ 502 (509)
++||+|+.++++|++++++|+++++
T Consensus 388 ~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 388 LVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999875
No 6
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.4e-47 Score=397.50 Aligned_cols=345 Identities=20% Similarity=0.290 Sum_probs=283.3
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~ 98 (509)
|.|.+ |+.+.+++.+.+.. ....+|+++.|.++||+++++++.+++|+.++++ +|++|+|+++++.++++.+++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~ 114 (388)
T PRK07366 38 GSSDLPAPAHALEAIAQSLHD---PSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLN 114 (388)
T ss_pred CCCCCCCCHHHHHHHHHHHhC---cccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCC
Confidence 56665 56788888877765 3345599999999999999999999899999998 699999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| .|+++.|+|..+...++..|++++.++++++++|.+|++.+++.+.. ++++|++++||||||.++|.+
T Consensus 115 ~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----~~k~i~l~~p~NPTG~~~s~~ 185 (388)
T PRK07366 115 PGD----FALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA-----QARLMVLSYPHNPTTAIAPLS 185 (388)
T ss_pred CCC----EEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc-----cceEEEEeCCCCCCCccCCHH
Confidence 998 99999999999999999999999999998777788999999887765 689999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|++||+||+|.+|.+++.....++.++.++ ..++|+++||||.| |+||+|+||++ +++
T Consensus 186 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~------~~~vi~~~SfSK~~-g~~GlRiG~~v---~~~ 255 (388)
T PRK07366 186 FFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPE------KSVSIEFFTLSKSY-NMGGFRIGFAI---GNA 255 (388)
T ss_pred HHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCC------cccEEEEeeccccc-CCcchhheehc---CCH
Confidence 999999999999999999999999998643224455444221 23589999999999 79999999998 899
Q ss_pred HHHHHHHHhhhcc-cCc-chhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 259 GVKAMLHKSISAM-LCP-TVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 259 ~~~~~l~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
++++.+.+....+ .+. +.. .+.++..+.+ ..++
T Consensus 256 ~li~~l~~~~~~~~~~~~~~~----------------------------------~~~a~~~l~~-----------~~~~ 290 (388)
T PRK07366 256 QLIQALRQVKAVVDFNQYRGI----------------------------------LNGAIAALTG-----------PQAT 290 (388)
T ss_pred HHHHHHHHHHhhcccCCCHHH----------------------------------HHHHHHHHhC-----------cHHH
Confidence 9999998876632 222 222 2333333322 1245
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCC-CcHHHHHHHHhhcCeEEecCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKC-PSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
++++++.++++++.+.+.|+++ ++.+..|++|+|+|++++- ++. ++.+++..+++++||.++||..|
T Consensus 291 l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~~~~-----------~~~~~~~~~~~~l~~~~gv~v~pg~~f 358 (388)
T PRK07366 291 VQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMYVWAKLPE-----------PWQGNSVEFCTQLVAQTGVAASPGSGF 358 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECCc-----------ccCCCHHHHHHHHHHhCCEEEeCchHh
Confidence 8889999999999999999988 7877789999999987751 111 24555677778899999999988
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+. .+.+ |+||+++.++++++++++
T Consensus 359 ~~------------------------------------------------~~~~--------~iRi~~~~~~~~l~~~l~ 382 (388)
T PRK07366 359 GK------------------------------------------------SGEG--------YVRFALVHDPDILEEAVE 382 (388)
T ss_pred Cc------------------------------------------------CCCC--------eEEEEecCCHHHHHHHHH
Confidence 65 2323 999999988999999999
Q ss_pred HHHHHH
Q psy13922 496 KFREFH 501 (509)
Q Consensus 496 ~l~~~~ 501 (509)
+|++++
T Consensus 383 rl~~~l 388 (388)
T PRK07366 383 RIAAFL 388 (388)
T ss_pred HHHHhC
Confidence 998763
No 7
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.7e-47 Score=398.12 Aligned_cols=351 Identities=23% Similarity=0.375 Sum_probs=288.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
|+.+.+++.++++. ...+.|++..|.+++|++++++++.++|.++++++|++|+|++++|.+++..+.++|| +
T Consensus 71 ~~~~~~a~~~al~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd----~ 143 (430)
T PLN00145 71 APEAEDAVAAALRS---GKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGA----N 143 (430)
T ss_pred CHHHHHHHHHHHHc---CcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCC----E
Confidence 67899999988887 4455699999999999999999999889899999999999999999999999999998 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+++.|+|..|...+...|++++.+++.++.+|.+|++.+++.+++ +++++++++||||||.+++.+++++|+++
T Consensus 144 Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~i~i~~P~NPtG~v~~~~~l~~i~~~ 218 (430)
T PLN00145 144 ILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE-----NTVAMVIINPNNPCGSVYSYEHLAKIAET 218 (430)
T ss_pred EEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc-----CceEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999987777899999999998877 79999999999999999999999999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH-----
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK----- 261 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~----- 261 (509)
|+++|++||+||+|.+|.+++ ..+.++..+.. ..++|+++||||.| ++||+|+||++. ..++.++
T Consensus 219 a~~~~i~ii~De~Y~~~~~~~-~~~~~~~~~~~-------~~~vi~~~S~SK~~-~~pG~RlG~iv~-~~~~~~~~~~~~ 288 (430)
T PLN00145 219 ARKLGILVIADEVYDHLTFGS-KPFVPMGVFGE-------VAPVLTLGSISKRW-VVPGWRLGWIAT-CDPNGILKETKV 288 (430)
T ss_pred HHHcCCEEEEeccchhhccCC-CCccchhhhcc-------cCcEEEEecccccc-CCCCeeEEEEEE-ecchhhhhhhHH
Confidence 999999999999999998864 24455544321 23599999999999 799999999972 1133333
Q ss_pred -HHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHH
Q psy13922 262 -AMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSV 340 (509)
Q Consensus 262 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 340 (509)
..+........+++.+ .|.++..++.. ...+++++.
T Consensus 289 ~~~~~~~~~~~~~~~~~----------------------------------~Q~a~~~~l~~---------~~~~~~~~~ 325 (430)
T PLN00145 289 VDSIRNYLNISTDPATF----------------------------------VQGAIPQIIAN---------TKEEFFTKT 325 (430)
T ss_pred HHHHHHHhcccCCCCHH----------------------------------HHHHHHHHHhc---------CHHHHHHHH
Confidence 3344443333455666 55555555431 113447888
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeec-cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 341 LDSLKQRAKMVADTFNSIEGMSCN-PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 341 ~~~~~~~~~~l~~~L~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
++.++++++.+.+.|++++++.+. .|+|++|+|++++... ..++.++.+++..+++++||.+.||..|+.
T Consensus 326 ~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~-------~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~-- 396 (430)
T PLN00145 326 LGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSC-------LSGIKDDMDFCCKLAKEESVVVLPGSALGM-- 396 (430)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhh-------cCCCCCHHHHHHHHHHhCCEEEeCccccCC--
Confidence 999999999999999998888864 7999999998775210 012334667788999999999999998876
Q ss_pred CccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHH
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFRE 499 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~ 499 (509)
++ |+||+|+.+.++|+++++||++
T Consensus 397 ----------------------------------------------~~----------~lRis~~~~~~~l~~al~rl~~ 420 (430)
T PLN00145 397 ----------------------------------------------KN----------WLRITFAIDPPSLEDGLERLKS 420 (430)
T ss_pred ----------------------------------------------CC----------eEEEEeCCCHHHHHHHHHHHHH
Confidence 44 9999999999999999999999
Q ss_pred HHHHHHhh
Q psy13922 500 FHEEFLAK 507 (509)
Q Consensus 500 ~~~~~~~~ 507 (509)
++.++.++
T Consensus 421 ~~~~~~~~ 428 (430)
T PLN00145 421 FCLRHAKL 428 (430)
T ss_pred HHHHhccc
Confidence 99887764
No 8
>PLN02187 rooty/superroot1
Probab=100.00 E-value=5.2e-47 Score=399.74 Aligned_cols=351 Identities=23% Similarity=0.380 Sum_probs=287.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
|+.+.+++.++++. +....|++..|.+++|+++|+++++++++++++++|++|+|++++|..++.+++++|| .
T Consensus 85 ~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd----~ 157 (462)
T PLN02187 85 CIEAEDAVVDVLRS---GKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNA----N 157 (462)
T ss_pred CHHHHHHHHHHHhC---CCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCC----E
Confidence 56788998888876 3445699999999999999999999889899999999999999999999999999998 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+++.|+|..|...++..|++++.+++.++.+|.+|++.|+++++. ++++++++|||||||.+++.+++++|+++
T Consensus 158 Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~-----~~~~v~i~nP~NPTG~v~s~e~l~~i~~~ 232 (462)
T PLN02187 158 ILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADE-----NTVAMVVINPNNPCGNVYSHDHLKKVAET 232 (462)
T ss_pred EEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCC-----CcEEEEEeCCCCCCCCccCHHHHHHHHHH
Confidence 9999999999999999999999999987666799999999998876 78999999999999999999999999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH----HHH
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG----VKA 262 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~----~~~ 262 (509)
|+++|++||+||+|.++.+++. .+.++.++.. ..++|+++||||.| |+||+|+||++. .+++ +++
T Consensus 233 a~~~~i~iI~DE~Y~~l~f~~~-~~~s~~~~~~-------~~~vi~l~SfSK~f-~~pGlRiG~~v~--~~p~~~~~~~~ 301 (462)
T PLN02187 233 ARKLGIMVISDEVYDRTIFGDN-PFVSMGKFAS-------IVPVLTLAGISKGW-VVPGWKIGWIAL--NDPEGVFETTK 301 (462)
T ss_pred HHHCCCEEEEeccccccccCCC-CceeHHHhcc-------CCcEEEEecchhhc-CCccceeEEEEe--cCchhHHHHHH
Confidence 9999999999999999998643 4455554421 12499999999999 799999999972 3443 334
Q ss_pred HHHHhhhcc---cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 263 MLHKSISAM---LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 263 ~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
.+......+ .+++.+ .|.++..+++. ...+++++
T Consensus 302 ~~~~~~~~~~~~~~~s~~----------------------------------~Q~a~~~~L~~---------~~~~~l~~ 338 (462)
T PLN02187 302 VLQSIKQNLDVTPDPATI----------------------------------IQAALPAILEK---------ADKNFFAK 338 (462)
T ss_pred HHHHHHHhccccCCCCHH----------------------------------HHHHHHHHHhc---------CcHHHHHH
Confidence 555544422 234666 56666655531 12245888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCe-eccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMS-CNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
+++.++++++.+.+.|++++++. +..|++++|+|+++..+. ..++.++.+++..++.++||.++||..|+.
T Consensus 339 ~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~-------~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~- 410 (462)
T PLN02187 339 KNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSL-------MDNIKDDIDFCVKLAREENLVFLPGDALGL- 410 (462)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhh-------CCCCCCHHHHHHHHHhhCCEEEECccccCC-
Confidence 99999999999999999986554 346889999998764211 012334556678888999999999998865
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
++ ||||+|+.+++.|+++++||.
T Consensus 411 -----------------------------------------------~~----------~iRis~~~~~e~l~~al~rL~ 433 (462)
T PLN02187 411 -----------------------------------------------KN----------WMRITIGVEAHMLEDALERLK 433 (462)
T ss_pred -----------------------------------------------CC----------eEEEEeCCCHHHHHHHHHHHH
Confidence 44 999999999999999999999
Q ss_pred HHHHHHHhhc
Q psy13922 499 EFHEEFLAKY 508 (509)
Q Consensus 499 ~~~~~~~~~~ 508 (509)
++++++.++.
T Consensus 434 ~~l~~~~~~~ 443 (462)
T PLN02187 434 GFCTRHAKKT 443 (462)
T ss_pred HHHHHhhhcc
Confidence 9999887764
No 9
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=5.4e-47 Score=395.14 Aligned_cols=370 Identities=22% Similarity=0.342 Sum_probs=289.1
Q ss_pred HHHHHHHhhcCCCCC----CCCC----C--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC
Q psy13922 7 LSLQVLALVSLPQLF----DDPR----F--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW 76 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~----~~~~----~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~ 76 (509)
.++..+.....++.+ |+|+ | |+.+.+++.+++.+ ...++|+++.|.+++|+++++++.+++|+++++
T Consensus 21 ~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 97 (409)
T PLN00143 21 FLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRS---AKFNSYAPTGGILPARRAIADYLSNDLPYQLSP 97 (409)
T ss_pred HHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhC---cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH
Confidence 334433333344443 7775 5 67888999998887 445569999999999999999999998988999
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
++|++|+|+++++..++++++++|| .|+++.|+|..|...++..|.+++.++++++.+|.+|++.|+++++.
T Consensus 98 ~~I~it~G~~~al~~~~~~l~~~gd----~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---- 169 (409)
T PLN00143 98 DDVYLTLGCKHAAEIIIKVLARPEA----NILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE---- 169 (409)
T ss_pred hhEEEecChHHHHHHHHHHHcCCCC----EEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc----
Confidence 9999999999999999999999998 99999999999999999999999999987656789999999988866
Q ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec
Q psy13922 157 CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC 236 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 236 (509)
++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++. .+.++..+.. ..++|+++||
T Consensus 170 -~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~~~~~~~~~-------~~~vi~~~Sf 240 (409)
T PLN00143 170 -NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK-PFVPMGLFAS-------IVPVITLGSI 240 (409)
T ss_pred -CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC-CCcchhhhcc-------cCcEEEEccc
Confidence 789999999999999999999999999999999999999999999998642 3344433321 2359999999
Q ss_pred ccccCCCCCCeeEEEeeecCCH-HH------HHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCc
Q psy13922 237 SKGYMGECGLRGGYSEVINLDP-GV------KAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQ 309 (509)
Q Consensus 237 SK~~~G~~Glr~G~v~~~~~~~-~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (509)
||.| |+||+|+||++. .++ .+ ++.+.+.......++.+
T Consensus 241 SK~f-~~pGlRvG~~v~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 285 (409)
T PLN00143 241 SKRW-MIPGWGLGWLVT--CDPSGLLQICEIADSIKKALNPAPFPPTF-------------------------------- 285 (409)
T ss_pred hhhc-CCCccceEEEEe--eCchhhhhhHHHHHHHHHHHhccCCCCch--------------------------------
Confidence 9999 799999999972 233 33 33343333222233455
Q ss_pred ccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCee-ccCCceeEEeecCCCCHHHHHHHhh
Q psy13922 310 SVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSC-NPVQGAMYAFPQMKLPAKAIAKAKA 388 (509)
Q Consensus 310 ~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~ 388 (509)
.|.++..++.. ....++++.++.++++++.+.+.|+++++..+ ..|+|++|+|++++... .
T Consensus 286 --~q~a~~~~l~~---------~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~-------~ 347 (409)
T PLN00143 286 --IQAAIPEILEK---------TTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLL-------L 347 (409)
T ss_pred --HHHHHHHHHhc---------ChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhh-------c
Confidence 55555555431 11234777788888888989999988754443 46889999998775100 0
Q ss_pred cCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCC
Q psy13922 389 EGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGA 468 (509)
Q Consensus 389 ~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (509)
.++.++.+++..+++++||.++||..|+. .+
T Consensus 348 ~~~~~~~~~~~~ll~~~gV~v~pg~~f~~------------------------------------------------~~- 378 (409)
T PLN00143 348 EDIEDDMEFCLKLAKEESLIILPGVTVGL------------------------------------------------KN- 378 (409)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCccccCC------------------------------------------------CC-
Confidence 12224566677888999999999998865 44
Q ss_pred CCCCCCCceeEEEEeecChHHHHHHHHHHHHHHHHHHhh
Q psy13922 469 GFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 469 ~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
++||+|+.++++++++++||+++++++.++
T Consensus 379 ---------~iRi~~~~~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 379 ---------WLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred ---------eEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence 999999988999999999999999877653
No 10
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=3.2e-47 Score=407.80 Aligned_cols=354 Identities=27% Similarity=0.452 Sum_probs=284.5
Q ss_pred CCC---CC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDP---RF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~---~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
|+| .+ |+.+++++.+.+.. ..+|++..|.++||+++++++.++++..+++++|++|+|+++++.+++.++
T Consensus 154 G~p~~~~~~~p~~~~~~~~~~~~~-----~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l 228 (517)
T PRK13355 154 GNPAPFGFRTPDEVVYDMAQQLTD-----TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSAL 228 (517)
T ss_pred cCCCcCCCCCCHHHHHHHHHHhhc-----CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHh
Confidence 667 57 88999998887754 235999999999999999999887666789999999999999999999999
Q ss_pred hcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 97 IEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
+++|| .|+++.|+|..|...++..|++++.++++++++|.+|++.+++.+.. ++++|+++|||||||.+++
T Consensus 229 ~~~Gd----~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~-----~~k~i~i~nP~NPTG~v~~ 299 (517)
T PRK13355 229 LDDGD----EVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITS-----RTKAIVIINPNNPTGALYP 299 (517)
T ss_pred CCCCC----EEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCc-----CceEEEEECCCCCCCcCcC
Confidence 99998 99999999999999999999999999998877899999999998876 7999999999999999999
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
.+++++|+++|++||++||+||+|.+|.+++. .+.++.++.+ +..+++++||||.| |++|+|+||+++ .+
T Consensus 300 ~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~-~~~s~~~~~~-------~~~vi~~~S~SK~~-~~~G~RiG~~i~-~~ 369 (517)
T PRK13355 300 REVLQQIVDIAREHQLIIFSDEIYDRLVMDGL-EHTSIASLAP-------DLFCVTFSGLSKSH-MIAGYRIGWMIL-SG 369 (517)
T ss_pred HHHHHHHHHHHHHcCcEEEEehhhhhhcCCCC-CcccHHHhCC-------CCeEEEEecchhhc-cCcccceEEEEe-eC
Confidence 99999999999999999999999999998642 4566666532 23478889999999 799999999972 22
Q ss_pred CHH----HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 257 DPG----VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 257 ~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
+++ +++.+........+.+.+ +|.++..++.. ...+..
T Consensus 370 ~~~~~~~~~~~l~~~~~~~~~~~~~----------------------------------~q~a~~~aL~~----~~~~~~ 411 (517)
T PRK13355 370 NKRIAKDYIEGLNMLANMRLCSNVP----------------------------------AQSIVQTALGG----HQSVKD 411 (517)
T ss_pred chhhHHHHHHHHHHHhcCcCCcChH----------------------------------HHHHHHHHhcC----CccHHH
Confidence 343 444454333333456666 44444444431 111233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecC
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPG 412 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg 412 (509)
+ ++..+ .+.++++++.+.|+++||+++.+|+|+||+|++++.. ..++.++..++..+|+++||.++||
T Consensus 412 ~---~~~~~-~~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~--------~~~~~~~~~~~~~ll~~~gV~v~pg 479 (517)
T PRK13355 412 Y---LVPGG-RVYEQRELVYNALNAIPGISAVKPKAAFYIFPKIDVK--------KFNIHDDEQFALDLLHDKKVLIVQG 479 (517)
T ss_pred H---HHHHH-HHHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecCcc--------cCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 3 44433 3445679999999999899999999999999877521 0123345667788999999999999
Q ss_pred CCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHH
Q psy13922 413 AGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKA 492 (509)
Q Consensus 413 ~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~ 492 (509)
..|+. .+.+ |||++|+.++++|++
T Consensus 480 ~~F~~------------------------------------------------~~~~--------~~Ris~~~~~~~l~~ 503 (517)
T PRK13355 480 TGFNW------------------------------------------------DKPD--------HFRVVYLPRLEDLED 503 (517)
T ss_pred chhCC------------------------------------------------CCcC--------EEEEEeCCCHHHHHH
Confidence 99875 3333 999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy13922 493 MLEKFREFHEEFL 505 (509)
Q Consensus 493 ~~~~l~~~~~~~~ 505 (509)
+++||+++++.++
T Consensus 504 a~~rl~~~~~~~~ 516 (517)
T PRK13355 504 AMDRLADFFSYYR 516 (517)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999997654
No 11
>KOG0259|consensus
Probab=100.00 E-value=1.2e-46 Score=362.91 Aligned_cols=351 Identities=24% Similarity=0.375 Sum_probs=306.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
.+...+|+..++++ +.+++|+|+.|....|+++|+|+++...-.+++++|++|+|+++||++++.+|.+||. .
T Consensus 80 s~~a~~Av~~al~S---gk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~a----N 152 (447)
T KOG0259|consen 80 SQEAEQAVVDALRS---GKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGA----N 152 (447)
T ss_pred CHHHHHHHHHHHhc---CCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCC----c
Confidence 35788899999998 8888899999999999999999988888789999999999999999999999999998 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|++|-|.|+.|.-.+...|.++..+++-++.+|.+|++.+|.++++ ++.+|+++||+||+|.+++.+-|++|++.
T Consensus 153 ILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DE-----NT~AivviNP~NPcGnVys~~HL~kiae~ 227 (447)
T KOG0259|consen 153 ILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADE-----NTVAIVVINPNNPCGNVYSEDHLKKIAET 227 (447)
T ss_pred eecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhcc-----CeeEEEEeCCCCCCcccccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 89999999999999999999999999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeec-----CCHHHH
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN-----LDPGVK 261 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~-----~~~~~~ 261 (509)
|+++++.||.||+|.+++|++ .++.++..+...+ -|++++|+||.|- .||||+||+++.. .+..+.
T Consensus 228 A~klgi~vIaDEVY~~~vfg~-~pfvpmg~fssiV-------PVitlggisKrW~-VPGWRlGWi~~hD~~gvf~~~~~~ 298 (447)
T KOG0259|consen 228 AKKLGIMVIADEVYGHTVFGD-KPFVPMGKFSSIV-------PVITLGGISKRWI-VPGWRLGWIALHDPRGVFRDTKVV 298 (447)
T ss_pred HHHhCCeEEehhhcceeecCC-CCccchhhccccC-------ceEeecccccccc-cCCceeeeEEEecccccccchHHH
Confidence 999999999999999999974 4788887765433 3999999999996 9999999998622 234555
Q ss_pred HHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHH
Q psy13922 262 AMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVL 341 (509)
Q Consensus 262 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (509)
+.+.+......+++++- |.|+-.++. ..-.+..+..+
T Consensus 299 q~~~~~~~~~~~p~Tii----------------------------------Q~AlP~IL~---------kTp~efF~k~~ 335 (447)
T KOG0259|consen 299 QGIKNFLDIIPGPATII----------------------------------QGALPDILE---------KTPEEFFDKKL 335 (447)
T ss_pred HHHHHHHhccCCccHhH----------------------------------HHHhHHHHH---------hChHHHHHHHH
Confidence 67777777777888884 444433333 11112267788
Q ss_pred HHHHHHHHHHHHHHhcCCCCe-eccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCC
Q psy13922 342 DSLKQRAKMVADTFNSIEGMS-CNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPG 420 (509)
Q Consensus 342 ~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~ 420 (509)
+.++.+.+..++.|.++|++. ...|+|.+|+|+++.+.- ...+.++.+|+..+..+..+.+.||..|+.
T Consensus 336 ~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~-------~~~~~dD~dFc~kL~~Eesv~~LPG~af~~--- 405 (447)
T KOG0259|consen 336 SFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSL-------FPDIEDDVDFCQKLAREESVICLPGQAFGL--- 405 (447)
T ss_pred HHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhh-------hccccccHHHHHHHhhhcceEEeccccccC---
Confidence 999999999999999999999 568999999998876321 125668899999999999999999999998
Q ss_pred ccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHH
Q psy13922 421 TYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREF 500 (509)
Q Consensus 421 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~ 500 (509)
++ |+|++++.+.+.++++.+||+.+
T Consensus 406 ---------------------------------------------~n----------w~Ri~i~~~~~~leea~~Rik~F 430 (447)
T KOG0259|consen 406 ---------------------------------------------KN----------WLRIVITVEEEMLEEAFSRIKEF 430 (447)
T ss_pred ---------------------------------------------CC----------eEEEEEccChHHHHHHHHHHHHH
Confidence 67 99999999999999999999999
Q ss_pred HHHHHh
Q psy13922 501 HEEFLA 506 (509)
Q Consensus 501 ~~~~~~ 506 (509)
.++..+
T Consensus 431 c~RH~~ 436 (447)
T KOG0259|consen 431 CDRHSK 436 (447)
T ss_pred HHhhhh
Confidence 988653
No 12
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=2.3e-46 Score=392.82 Aligned_cols=366 Identities=25% Similarity=0.407 Sum_probs=285.2
Q ss_pred CCCC-----CCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH
Q psy13922 21 FDDP-----RFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL 95 (509)
Q Consensus 21 ~~~~-----~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 95 (509)
+|+| ..|+.+.+++.+.+.. ....+|++..|.++||+++++++++++|+.+++++|++|+|+++++..++.
T Consensus 39 ~G~p~~~~~~~p~~~~~a~~~~~~~---~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~- 114 (433)
T PRK06855 39 IGDPIAKGEKIPDWMKEIVAELVMD---DKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG- 114 (433)
T ss_pred cCCCcccCCCCCHHHHHHHHHHhhc---CCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-
Confidence 5778 3477888898888765 344559999999999999999999999999999999999999999999985
Q ss_pred hhcCCCCCCCeEEEcCCCChhHHHHH-HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 96 LIEDVDGKKPGVLIPIPQYPLYSASL-AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 96 l~~~gd~~~~~Vlv~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
++++|| .|+++.|+|..|.... ...|.+++.++++++.+|.+|++.|++.++.. ++++++++++||||||.+
T Consensus 115 l~~~Gd----~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~i~l~~P~NPTG~~ 187 (433)
T PRK06855 115 LLRREA----RVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN---PSIAGILLINPDNPTGAV 187 (433)
T ss_pred hcCCCC----eEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC---CCceEEEEECCCCCCCcC
Confidence 788888 9999999999987543 45699999999987677899999999998731 157899999999999999
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
+|.+++++|+++|++||++||+||+|.++.+++. .+.++.++.++ .++|+++||||.| |+||+|+||++..
T Consensus 188 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~-~~~sl~~~~~~-------~~~I~~~S~SK~~-~~pGlRiG~ii~p 258 (433)
T PRK06855 188 YPKEILREIVDIAREYDLFIICDEIYNNIVYNGK-KTVPLSEVIGD-------VPGIALKGISKEL-PWPGSRCGWIEVY 258 (433)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCCCHHHHcCc-------CCeEEEecCcccc-CCCcceEEEEEEe
Confidence 9999999999999999999999999999988642 45666665432 2379999999999 6999999999831
Q ss_pred c--CCH---HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCc
Q psy13922 255 N--LDP---GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPS 329 (509)
Q Consensus 255 ~--~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 329 (509)
. .++ .+++.+........+++.+ .|.++..+++ ++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~Q~a~~~~l~-----~~~ 299 (433)
T PRK06855 259 NADKDEVFKKYINSILNAKMIEVCSTTL----------------------------------PQMAIPRIMS-----HPE 299 (433)
T ss_pred CCchhhHHHHHHHHHHHhhccccCCChH----------------------------------HHHHHHHhhc-----CCc
Confidence 1 123 2334343333223345566 5666666655 233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCH---------------HHHHHHhhcCCCCc
Q psy13922 330 YEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPA---------------KAIAKAKAEGKCPS 394 (509)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~---------------~~~~~~~~~g~~~~ 394 (509)
++. +++++++.++++++.+.+.|++++++.+.+|+||||+|++++-.. .........+..++
T Consensus 300 ~~~---~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (433)
T PRK06855 300 YKN---YLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPD 376 (433)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCch
Confidence 444 488899999999999999999888888889999999998775210 00000000001246
Q ss_pred HHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCC
Q psy13922 395 VLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVP 474 (509)
Q Consensus 395 ~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (509)
++++..+++++||.+.||+.|+. .+ .
T Consensus 377 ~~~~~~l~~~~gV~v~PG~~F~~------------------------------------------------~~-~----- 402 (433)
T PRK06855 377 KRFVYYLLASTGICVVPLSSFCT------------------------------------------------EL-N----- 402 (433)
T ss_pred HHHHHHHHHHcCEEEecCCcCCC------------------------------------------------CC-C-----
Confidence 67778889999999999999865 22 1
Q ss_pred CceeEEEEee-cChHHHHHHHHHHHHHHHHHH
Q psy13922 475 GTYHFRTTIL-PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 475 ~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~~ 505 (509)
++||||+ .+.++|++++++|+++++++.
T Consensus 403 ---~~Rls~~~~~~~~i~~~~~~l~~~~~~~~ 431 (433)
T PRK06855 403 ---GFRVTLLERDEEKFEWIYQTLAEKIEEYL 431 (433)
T ss_pred ---ceEEEECCCcHHHHHHHHHHHHHHHHHHh
Confidence 5999999 699999999999999998654
No 13
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-46 Score=391.11 Aligned_cols=345 Identities=20% Similarity=0.270 Sum_probs=283.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-CcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
|+.+.+++.+.+.. .....|++..|.++||+++++++.+.+|+++++ ++|++|+|+++++..++.+++++||
T Consensus 55 ~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd---- 127 (405)
T PRK06207 55 TPGAFELFSAGVER---GGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGD---- 127 (405)
T ss_pred CHHHHHHHHHHHhc---CCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCC----
Confidence 56788888888766 334459999999999999999999999988888 8999999999999999999999998
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecC---CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLD---ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
+|+++.|+|..+...++..|++++.++++ ++.+|++|++.|++.+++ ++++|++++||||||.+++.+++++
T Consensus 128 ~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-----~~k~v~l~~P~NPTG~~~s~e~l~~ 202 (405)
T PRK06207 128 KVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA-----GVRVFLFSNPNNPAGVVYSAEEIAQ 202 (405)
T ss_pred EEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh-----cCeEEEECCCCCCCCcCCCHHHHHH
Confidence 99999999999999999999999999986 334689999999999877 6899999999999999999999999
Q ss_pred HHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHH
Q psy13922 183 IIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKA 262 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~ 262 (509)
|+++|+++|++||+||+|.++.+++. .+.++.++.. ...++|+++||||.| |+||+|+||++ +++++++
T Consensus 203 l~~~a~~~~~~iI~De~Y~~~~~~~~-~~~~~~~~~~------~~~~vi~i~SfSK~~-~lpGlRiG~ii---~~~~l~~ 271 (405)
T PRK06207 203 IAALARRYGATVIVDQLYSRLLYDGT-SYTHLRALPI------DPENVITIMGPSKTE-SLSGYRLGVAF---GSPAIID 271 (405)
T ss_pred HHHHHHHcCCEEEEeccccccccCCC-CCCchhcCCC------CcCcEEEEecchhhc-cCcccceEEEE---cCHHHHH
Confidence 99999999999999999999988643 3344433211 123599999999999 79999999998 8999999
Q ss_pred HHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHH
Q psy13922 263 MLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVL 341 (509)
Q Consensus 263 ~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (509)
.+...... ..+.+.+ .|.++..+++. ...++++.+
T Consensus 272 ~~~~~~~~~~~~~~~~----------------------------------~q~a~~~~l~~----------~~~~~~~~~ 307 (405)
T PRK06207 272 RMEKLQAIVSLRAAGY----------------------------------SQAVLRTWFSE----------PDGWMKDRI 307 (405)
T ss_pred HHHHHHhHhccCCCHH----------------------------------HHHHHHHHHhC----------cHHHHHHHH
Confidence 99887653 3344555 55555555431 012245566
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCc
Q psy13922 342 DSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGT 421 (509)
Q Consensus 342 ~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~ 421 (509)
+.++++++.+.+.|++++++.+.+|++|+|+|++++ . ...++.+++..+++++||.++||..|+.
T Consensus 308 ~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~--~---------~~~~~~~~~~~l~~~~gV~v~pG~~F~~---- 372 (405)
T PRK06207 308 ARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLP--R---------LAVSLHDFVKILRLQAGVIVTPGTEFSP---- 372 (405)
T ss_pred HHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCc--c---------cCCCHHHHHHHHHHhcCEEEeCchHhCC----
Confidence 677788899999998887888888999999998775 1 0113456666777789999999998875
Q ss_pred cccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHH
Q psy13922 422 YHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFH 501 (509)
Q Consensus 422 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~ 501 (509)
.+.+ +|||+|+.+.++|+++++||++++
T Consensus 373 --------------------------------------------~~~~--------~~Ris~~~~~~~l~~al~rl~~~l 400 (405)
T PRK06207 373 --------------------------------------------HTAD--------SIRLNFSQDHAAAVAAAERIAQLI 400 (405)
T ss_pred --------------------------------------------CCCC--------eEEEEecCCHHHHHHHHHHHHHHH
Confidence 3333 999999998999999999999999
Q ss_pred HHHH
Q psy13922 502 EEFL 505 (509)
Q Consensus 502 ~~~~ 505 (509)
++++
T Consensus 401 ~~~~ 404 (405)
T PRK06207 401 ERYR 404 (405)
T ss_pred HHhh
Confidence 7654
No 14
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-46 Score=366.15 Aligned_cols=350 Identities=23% Similarity=0.375 Sum_probs=306.8
Q ss_pred CCCCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh
Q psy13922 20 LFDDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 20 ~~~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 97 (509)
|+.+=+| ||.|++++++.+.. +-++ |+ .+..++.+++++|+.++|++.++++-|++++|..-++..+++.|+
T Consensus 31 WVADMDf~~pp~i~~Al~~rvdh---GvfG-Y~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T 104 (388)
T COG1168 31 WVADMDFPTPPEIIEALRERVDH---GVFG-YP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT 104 (388)
T ss_pred eeecccCCCCHHHHHHHHHHHhc---CCCC-CC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC
Confidence 3455565 79999999999998 6666 87 455889999999999999999999999999999999999999999
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC-CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD-ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
++|| .|++..|.|+++....+.+|.+++..|+. +++.|.+|++.||+.+.+. +++++++||||||||.+.+
T Consensus 105 ~~gd----~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~----~vkl~iLCnPHNP~Grvwt 176 (388)
T COG1168 105 KPGD----GVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDE----RVKLFILCNPHNPTGRVWT 176 (388)
T ss_pred cCCC----eeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcC----CccEEEEeCCCCCCCcccc
Confidence 9999 99999999999999999999999999987 5578899999999999985 7899999999999999999
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
+++|++|.++|++||+.||+||+|.++++.+. ++.++.++.+... .++|++.|.||+|+ ++|+..+++++ .
T Consensus 177 ~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~-~h~~~a~ls~~~a-----~~~it~~saSKtFN-laGL~~a~~Ii--~ 247 (388)
T COG1168 177 KEELRKIAELCLRHGVRVISDEIHADLVLGGH-KHIPFASLSERFA-----DNSITLTSASKTFN-LAGLKCAYIII--S 247 (388)
T ss_pred HHHHHHHHHHHHHcCCEEEeecccccccccCC-CccchhhcChhhh-----cceEEEeecccccc-chhhhheeEEe--c
Confidence 99999999999999999999999999999864 6777776655542 34888999999995 99999999987 8
Q ss_pred CHHHHHHHHHhhh--cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHH
Q psy13922 257 DPGVKAMLHKSIS--AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFS 334 (509)
Q Consensus 257 ~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 334 (509)
++++++++.+... ...++|.+ +..|..++ |.+..
T Consensus 248 n~~lr~~~~~~l~~~~~~~~n~l----------------------------------g~~A~~aA----------Y~~G~ 283 (388)
T COG1168 248 NRELRAKFLKRLKRNGLHGPSAL----------------------------------GIIATEAA----------YNQGE 283 (388)
T ss_pred CHHHHHHHHHHHHHhcCCCCchH----------------------------------HHHHHHHH----------HHhch
Confidence 8888776654433 56678888 55555555 55666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 335 REKQSVLDSLKQRAKMVADTFNS-IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 335 ~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
.|++++++.++.+++++.+.+++ +|++++..|+|.+.+|++++ ++|+.+ +...+.++++.+|.+-+|.
T Consensus 284 ~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r----------~l~l~d-~~l~~~ll~~akVal~~G~ 352 (388)
T COG1168 284 PWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCR----------ELGLDD-SELAEFLLEEAKVALSPGS 352 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeecc----------ccCCCh-HHHHHHHHHhhcEeccCCC
Confidence 78999999999999999999999 79999999999999999997 345543 3447899999999999999
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHH
Q psy13922 414 GFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAM 493 (509)
Q Consensus 414 ~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~ 493 (509)
.|+. .|+| ++|++++++.+.++++
T Consensus 353 ~FG~------------------------------------------------~g~g--------f~RlN~acpr~~L~ea 376 (388)
T COG1168 353 TFGE------------------------------------------------EGSG--------FVRLNFACPRAILEEA 376 (388)
T ss_pred ccCc------------------------------------------------CCCc--------eEEEecCCCHHHHHHH
Confidence 9999 6666 9999999999999999
Q ss_pred HHHHHHHHHH
Q psy13922 494 LEKFREFHEE 503 (509)
Q Consensus 494 ~~~l~~~~~~ 503 (509)
++||+.++++
T Consensus 377 l~ri~~al~~ 386 (388)
T COG1168 377 LERLKRALKK 386 (388)
T ss_pred HHHHHHHHhc
Confidence 9999988864
No 15
>KOG0257|consensus
Probab=100.00 E-value=7e-48 Score=378.08 Aligned_cols=365 Identities=23% Similarity=0.320 Sum_probs=298.3
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~ 98 (509)
|.|++ |+.+.+++.+++.. ...++|.+..|.++|++++++.++..+|....++ +|++|.|+.++|..++..+++
T Consensus 39 Gfp~~~~P~fv~ea~~~~~~~---~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~ 115 (420)
T KOG0257|consen 39 GFPDFPPPKFVTEAAKNAAKE---PSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN 115 (420)
T ss_pred CCCCCCCcHHHHHHHHHHhcc---chhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence 66666 66899999999988 4678899999999999999999999888776666 699999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC------CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD------ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~------~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
+|| +|++.+|.|..|....+.+|...+.++.. -..+|.+|.+.|+..+.+ ++|+|++|+||||||
T Consensus 116 ~GD----eVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~-----kTk~Ii~ntPhNPtG 186 (420)
T KOG0257|consen 116 PGD----EVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE-----KTKAIILNTPHNPTG 186 (420)
T ss_pred CCC----EEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC-----CccEEEEeCCCCCcC
Confidence 999 99999999999999999999999999987 456899999999999999 899999999999999
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
.++|+++|++|+++|++||+++|+||+|..+.+++. ++..+.++ |++.+ ++|.++|+||+| |++|||+||++
T Consensus 187 kvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~-~h~r~asl-Pgm~e-----rtitvgS~gKtf-~~TGWrlGW~i 258 (420)
T KOG0257|consen 187 KVFSREELERIAELCKKHGLLVISDEVYEWLVYDGN-KHIRIASL-PGMYE-----RTITVGSFGKTF-GVTGWRLGWAI 258 (420)
T ss_pred cccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCC-cceeeecC-Cchhh-----eEEEecccccee-eeeeeeeeeee
Confidence 999999999999999999999999999999999854 46666666 66643 499999999999 79999999998
Q ss_pred eecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCC-CCCch
Q psy13922 253 VINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQP-GEPSY 330 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-~~~~~ 330 (509)
+++.+........+ .....+++. |.|...+++..+. .+
T Consensus 259 ---gp~~L~~~~~~vh~~~~~~~~Tp~----------------------------------q~A~a~a~~~~~~~~~--- 298 (420)
T KOG0257|consen 259 ---GPKHLYSALFPVHQNFVFTCPTPI----------------------------------QEASAAAFALELACLQ--- 298 (420)
T ss_pred ---chHHhhhhHHHHhhccccccCcHH----------------------------------HHHHHHHHhhhhhccC---
Confidence 78888888887766 233444441 2222222211100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 331 EQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
.....+.+.+.+.++++++.|.+.|.++ |++++.|+|++|+|+++.++..+.........+++..++..++++.|+.+.
T Consensus 299 p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~I 377 (420)
T KOG0257|consen 299 PGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVI 377 (420)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEe
Confidence 0111236779999999999999999999 999999999999999998544221111222344667778899999999999
Q ss_pred cCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHH
Q psy13922 411 PGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKL 490 (509)
Q Consensus 411 pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i 490 (509)
|++.|+.. .++|.+ .+ ++|++++.+.+.+
T Consensus 378 P~saF~s~---~~~~~~----------------------------------------~~--------~~r~~~~k~~~~L 406 (420)
T KOG0257|consen 378 PPSAFGSR---EHIKVA----------------------------------------ER--------LVRFCFCKADETL 406 (420)
T ss_pred CchhcCCc---hhhHHH----------------------------------------HH--------HHHHHHHhhHHHH
Confidence 99999983 122211 12 8999999999999
Q ss_pred HHHHHHHH
Q psy13922 491 KAMLEKFR 498 (509)
Q Consensus 491 ~~~~~~l~ 498 (509)
++++++|+
T Consensus 407 ~~a~e~l~ 414 (420)
T KOG0257|consen 407 RKAIERLK 414 (420)
T ss_pred HHHHHHHh
Confidence 99999998
No 16
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=2.7e-46 Score=390.56 Aligned_cols=374 Identities=21% Similarity=0.348 Sum_probs=296.4
Q ss_pred CchHHHHHHHHhhcCCCCC----CCCC-----C-CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhc--
Q psy13922 3 PVFSLSLQVLALVSLPQLF----DDPR-----F-PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRD-- 70 (509)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~----~~~~-----~-p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~-- 70 (509)
+....++.++...+.++.+ |.|. + |+.+.+++.+.+.. ....+|+++.|.++||+++++++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~---~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~ 94 (412)
T PTZ00433 18 PLRTVTDNAKPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDS---QECNGYPPTVGSPEAREAVATYWRNSFVH 94 (412)
T ss_pred cHHHHHHhhccCCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhc---CCCCCCCCCCCcHHHHHHHHHHHHhhccc
Confidence 3444555555443444443 5553 3 56788888887775 345669999999999999999998754
Q ss_pred ----CCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHH
Q psy13922 71 ----GQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISEL 146 (509)
Q Consensus 71 ----g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L 146 (509)
|..+++++|++|+|+++++.+++..++++|| +|+++.|+|..+...++..|++++.++.+++.+|++|++.|
T Consensus 95 ~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd----~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l 170 (412)
T PTZ00433 95 KESLKSTIKKDNVVLCSGVSHAILMALTALCDEGD----NILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEI 170 (412)
T ss_pred cccccCCCChhhEEEeCChHHHHHHHHHHhcCCCC----EEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHH
Confidence 4668899999999999999999999999998 99999999999999999999999999998766789999999
Q ss_pred HHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCC
Q psy13922 147 ERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYK 226 (509)
Q Consensus 147 ~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (509)
++.+.+ ++++|++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++. .+.++.++..
T Consensus 171 ~~~~~~-----~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~------- 237 (412)
T PTZ00433 171 RRLVDD-----RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA-TFTSVADFDT------- 237 (412)
T ss_pred HHHhcc-----CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC-CccchhhccC-------
Confidence 988876 799999999999999999999999999999999999999999999988642 3445544422
Q ss_pred CceeEEEEecccccCCCCCCeeEEEeeecC---CHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhh
Q psy13922 227 SMELASFMSCSKGYMGECGLRGGYSEVINL---DPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVL 303 (509)
Q Consensus 227 ~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (509)
..++|+++||||.| |+||+|+||+++.+. .+++++.+.+......+++.+
T Consensus 238 ~~~~i~~~SfSK~~-~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 290 (412)
T PTZ00433 238 TVPRVILGGTAKNL-VVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSV-------------------------- 290 (412)
T ss_pred CCceEEEccchhhc-CCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChH--------------------------
Confidence 12378999999999 799999999982001 246778777765434466776
Q ss_pred hcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHH
Q psy13922 304 DGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAI 383 (509)
Q Consensus 304 ~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 383 (509)
.|.++..++.. ....++++.++.++++++.+.+.|++..++.+..|++|+|+|++++...
T Consensus 291 --------~q~a~~~~l~~---------~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~--- 350 (412)
T PTZ00433 291 --------VQAALGEALLN---------TPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEK--- 350 (412)
T ss_pred --------HHHHHHHHHhc---------CcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhh---
Confidence 55555544431 1223478889999999999999999866788889999999997764110
Q ss_pred HHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhccccc
Q psy13922 384 AKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGIC 463 (509)
Q Consensus 384 ~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (509)
..++.++.+++..+++++||.++||..|+.
T Consensus 351 ----~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---------------------------------------------- 380 (412)
T PTZ00433 351 ----FRDIKSDVEFYEKLLEEENVQVLPGEIFHM---------------------------------------------- 380 (412)
T ss_pred ----cCCCCCHHHHHHHHHHhcCEEEeCccccCC----------------------------------------------
Confidence 001224566677778789999999998865
Q ss_pred ccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHHHHH
Q psy13922 464 IVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 464 ~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~~~~ 505 (509)
++ ++||+++.++++|++++++|.+++++++
T Consensus 381 --~~----------~iRis~~~~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 381 --PG----------FTRLTISRPVEVLREAVERIKAFCERHK 410 (412)
T ss_pred --CC----------eEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 44 9999999889999999999999998765
No 17
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-46 Score=386.17 Aligned_cols=358 Identities=23% Similarity=0.374 Sum_probs=290.2
Q ss_pred HHHHHHHhhc-CCCCC----CCCCCC--HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcE
Q psy13922 7 LSLQVLALVS-LPQLF----DDPRFP--DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDV 79 (509)
Q Consensus 7 ~~~~~~~~~~-~~~~~----~~~~~p--~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i 79 (509)
.++.++.++. .+..+ |.|.++ +.+++++.+.+.. ...+|+++.|.+++|+++++++.+++|+.+++++|
T Consensus 17 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i 92 (384)
T PRK06348 17 IMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKK----GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEI 92 (384)
T ss_pred HHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhE
Confidence 4566666653 23433 667763 4566655554443 24559999999999999999999889999999999
Q ss_pred EEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCc
Q psy13922 80 ILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNP 159 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~ 159 (509)
++|+|+++++..++.+++++|| .|+++.|+|.++...++..|++++.++..++.+|.+|++.|++.++. ++
T Consensus 93 ~it~G~~~al~~~~~~~~~~gd----~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~ 163 (384)
T PRK06348 93 MATVGACHGMYLALQSILDPGD----EVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS-----KT 163 (384)
T ss_pred EEcCChHHHHHHHHHHhcCCCC----EEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc-----Cc
Confidence 9999999999999999999998 99999999999999999999999999986556788999999998876 78
Q ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 160 RAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 160 ~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
++|++++||||||.++|.+++++|+++|++++++||+||+|.++.+++ .+.++.++.. . ..++|+++||||.
T Consensus 164 ~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-~-----~~~vi~~~SfSK~ 235 (384)
T PRK06348 164 KAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE--DFVPMATLAG-M-----PERTITFGSFSKD 235 (384)
T ss_pred cEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC--CccchhhcCC-C-----cCcEEEEecchhc
Confidence 999999999999999999999999999999999999999999998853 3344444321 1 2359999999999
Q ss_pred cCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhc
Q psy13922 240 YMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDC 318 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 318 (509)
+ |+||+|+||++ +++++++.+..... ...+++.+ .|.++..
T Consensus 236 ~-~l~GlRiG~~v---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~ 277 (384)
T PRK06348 236 F-AMTGWRIGYVI---APDYIIETAKIINEGICFSAPTI----------------------------------SQRAAIY 277 (384)
T ss_pred c-CCccccceeee---cCHHHHHHHHHHHHhccCCCCHH----------------------------------HHHHHHH
Confidence 9 79999999998 78999999987765 33456666 5555544
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHH
Q psy13922 319 VVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYA 398 (509)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 398 (509)
++. ...++++++++.++++++.+.+.|+.++++.+.+|+||+|+|++++.+ ++ ++.+++
T Consensus 278 ~l~----------~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~----------~~-~~~~l~ 336 (384)
T PRK06348 278 ALK----------HRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKT----------GL-SSVEFC 336 (384)
T ss_pred HHh----------CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccC----------CC-CHHHHH
Confidence 443 122347788899999999999999998788888999999999877411 12 355666
Q ss_pred HHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCcee
Q psy13922 399 FELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYH 478 (509)
Q Consensus 399 ~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (509)
..+++++||.+.||+.|+. .+.+ +
T Consensus 337 ~~l~~~~gv~v~pg~~f~~------------------------------------------------~~~~--------~ 360 (384)
T PRK06348 337 EKLLKEAHVLVIPGKAFGE------------------------------------------------SGEG--------Y 360 (384)
T ss_pred HHHHHhCCEEEcCchhhcc------------------------------------------------CCCC--------e
Confidence 7777889999999998875 3333 9
Q ss_pred EEEEeecChHHHHHHHHHHHHH
Q psy13922 479 FRTTILPQPEKLKAMLEKFREF 500 (509)
Q Consensus 479 ~Rls~~~~~~~i~~~~~~l~~~ 500 (509)
+|++++.+++++++++++|+++
T Consensus 361 iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 361 IRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEEEecCCHHHHHHHHHHHHhh
Confidence 9999999999999999999764
No 18
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=5e-46 Score=387.98 Aligned_cols=356 Identities=23% Similarity=0.385 Sum_probs=290.8
Q ss_pred CCCC----C--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH
Q psy13922 22 DDPR----F--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL 95 (509)
Q Consensus 22 ~~~~----~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 95 (509)
|+|. + |+.+++++.+++.+ ....+|++..|.+++|++++++++..+|+.+++++|++|+|+++++..++.+
T Consensus 39 G~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 115 (409)
T PLN02656 39 GDPTAYSCFHTTHVAQEAVVDALQS---NKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSM 115 (409)
T ss_pred CCCCcCCCCCCCHHHHHHHHHHHhc---CCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHH
Confidence 6775 4 67899999888887 4555699999999999999999999889889999999999999999999999
Q ss_pred hhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCC
Q psy13922 96 LIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVL 175 (509)
Q Consensus 96 l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~ 175 (509)
++++|| +|+++.|+|..+...++..|++++.++++++.+|.+|++.+++.++. +++++++++||||||.++
T Consensus 116 l~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-----~~~~v~l~~P~NPtG~~~ 186 (409)
T PLN02656 116 LARPGA----NILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ-----NTVALVIINPGNPCGNVY 186 (409)
T ss_pred HhCCCC----eEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc-----CceEEEEECCCCCCCCCC
Confidence 999998 99999999999998888999999999987666789999999988876 789999999999999999
Q ss_pred CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeec
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN 255 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~ 255 (509)
+.+++++|+++|+++|++||+||+|.+|.+++. .+.++..+.. ..++|+++||||.| ++||+|+||++...
T Consensus 187 s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~-------~~~vi~~~SfSK~f-~~pGlRiG~~i~~~ 257 (409)
T PLN02656 187 SYQHLKKIAETAEKLKILVIADEVYGHLAFGSN-PFVPMGVFGS-------IVPVLTLGSLSKRW-IVPGWRLGWFVTTD 257 (409)
T ss_pred CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC-CcccHHHhcc-------cCcEEEEcccchhc-cCcceeEEEEEEeC
Confidence 999999999999999999999999999998643 3344444321 23599999999999 79999999998200
Q ss_pred C-----CHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 256 L-----DPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 256 ~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
. ++++++++.+......+++.+ .|.++..+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~s~~----------------------------------~q~a~~~~l~~-------- 295 (409)
T PLN02656 258 PSGSFRDPKIVERIKKYFDILGGPATF----------------------------------IQAAVPTILEQ-------- 295 (409)
T ss_pred cccccccHHHHHHHHHHHhhhcCCCHH----------------------------------HHHHHHHHHhc--------
Confidence 0 368888888766544456666 56665555541
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCe-eccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE
Q psy13922 331 EQFSREKQSVLDSLKQRAKMVADTFNSIEGMS-CNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI 409 (509)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 409 (509)
....++++.++.++++++.+.+.|+.++++. +..|+||+|+|++++.+. ..+..++.+++..+++++||.+
T Consensus 296 -~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~-------~~~~~~~~~~~~~~l~~~gV~v 367 (409)
T PLN02656 296 -TDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSL-------LEDISDDIDFCFKLAREESVII 367 (409)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhh-------cCCCCCHHHHHHHHHHhCCEEE
Confidence 1123478888899999999999999886554 357999999998774210 0122234456778889999999
Q ss_pred ecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHH
Q psy13922 410 VPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEK 489 (509)
Q Consensus 410 ~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~ 489 (509)
+||+.|+. ++ +|||+|+.++++
T Consensus 368 ~pg~~fg~------------------------------------------------~~----------~iRi~~~~~~e~ 389 (409)
T PLN02656 368 LPGTAVGL------------------------------------------------KN----------WLRITFAADPSS 389 (409)
T ss_pred ecchhcCC------------------------------------------------CC----------eEEEEeCCCHHH
Confidence 99998865 44 999999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy13922 490 LKAMLEKFREFHEEFLA 506 (509)
Q Consensus 490 i~~~~~~l~~~~~~~~~ 506 (509)
|+++++||++++.++..
T Consensus 390 l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 390 LEEALGRIKSFYLRHSK 406 (409)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999986553
No 19
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-46 Score=386.94 Aligned_cols=342 Identities=20% Similarity=0.324 Sum_probs=282.9
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-CcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~ 98 (509)
|.|++ |+.+.+++.+.+.. .....|+ +.|.++||+++++++++++|+.+++ ++|++|+|+++++..++.++++
T Consensus 40 g~p~~~~~~~~~~~~~~~~~~---~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~ 115 (399)
T PRK07681 40 GNPDMPPADFVREEMVHTANQ---KESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYAN 115 (399)
T ss_pred CCCCCCCCHHHHHHHHHHHhc---cccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCC
Confidence 56654 56788888877765 2223365 4799999999999999999999998 8999999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| .|+++.|+|..|...++..|++++.++++++++|.+|++.+++.+.+ ++++|++++||||||.++|++
T Consensus 116 ~Gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~-----~~k~v~l~~P~NPTG~~~s~~ 186 (399)
T PRK07681 116 PGD----IILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIAD-----KAKMMILNFPGNPVPAMAHED 186 (399)
T ss_pred CCC----EEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccc-----cceEEEEeCCCCCcCcCCCHH
Confidence 998 99999999999999999999999999998777789999999988866 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|++||+||+|.++.+++. ...++.++... ..++|+++||||.| |++|+|+||++ +++
T Consensus 187 ~~~~i~~~a~~~~~~iI~De~y~~~~~~~~-~~~~~~~~~~~------~~~~i~~~S~SK~~-~~~GlRiG~~i---~~~ 255 (399)
T PRK07681 187 FFKEVIAFAKKHNIIVVHDFAYAEFYFDGN-KPISFLSVPGA------KEVGVEINSLSKSY-SLAGSRIGYMI---GNE 255 (399)
T ss_pred HHHHHHHHHHHcCeEEEEeccchhheeCCC-CCCChhhCCCC------cccEEEEeeccccc-CCccceeEEEe---cCH
Confidence 999999999999999999999999988642 34454443211 23489999999999 79999999998 799
Q ss_pred HHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+.+... ...+++.+ .|.++..++.. ..+++
T Consensus 256 ~l~~~~~~~~~~~~~~~s~~----------------------------------~q~~~~~~l~~----------~~~~~ 291 (399)
T PRK07681 256 EIVRALTQFKSNTDYGVFLP----------------------------------IQKAACAALRN----------GAAFC 291 (399)
T ss_pred HHHHHHHHHHhhcccCCCHH----------------------------------HHHHHHHHHhC----------cHHHH
Confidence 99999988765 34456666 45555555441 11346
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++.++.++++++.+.+.|++. |+++..|.+++|+|++++. ++ ++.+++..+++++||.++||..|+.
T Consensus 292 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~g~f~~~~l~~-----------~~-~~~~~~~~l~~~~gv~v~pg~~f~~ 358 (399)
T PRK07681 292 EKNRGIYQERRDTLVDGFRTF-GWNVDKPAGSMFVWAEIPK-----------GW-TSLSFAYALMDRANVVVTPGHAFGP 358 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeeEEEEECCC-----------CC-CHHHHHHHHHHhCCEEEeCChhhCc
Confidence 778889999999999999998 8888788999999987751 22 3556677888889999999998875
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+.+ ++|++++.+++++++++++|
T Consensus 359 ------------------------------------------------~~~~--------~iRis~~~~~~~~~~~l~~l 382 (399)
T PRK07681 359 ------------------------------------------------HGEG--------FVRIALVQDEEVLQQAVENI 382 (399)
T ss_pred ------------------------------------------------CCCC--------eEEEEecCCHHHHHHHHHHH
Confidence 3333 99999998899999999999
Q ss_pred HHH
Q psy13922 498 REF 500 (509)
Q Consensus 498 ~~~ 500 (509)
++.
T Consensus 383 ~~~ 385 (399)
T PRK07681 383 RNS 385 (399)
T ss_pred HHh
Confidence 983
No 20
>PLN02368 alanine transaminase
Probab=100.00 E-value=9.6e-46 Score=383.20 Aligned_cols=341 Identities=48% Similarity=0.854 Sum_probs=279.0
Q ss_pred hHHHHHHHHhhcCCCCCCCCC----CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEE
Q psy13922 5 FSLSLQVLALVSLPQLFDDPR----FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI 80 (509)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~----~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~ 80 (509)
..+.|+++..+..|..++.|. +|+..+.+....+... .....+|+++.|.++||+++++++++++|+.+++++|+
T Consensus 56 ~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~-~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~ 134 (407)
T PLN02368 56 LTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLT-SGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIF 134 (407)
T ss_pred chHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEE
Confidence 347788888888888887775 4776666655554321 13455699999999999999999999889889999999
Q ss_pred EeCCHHHHHHHHHHHhh-cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CC
Q psy13922 81 LSAGASDGIKSVLKLLI-EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CN 158 (509)
Q Consensus 81 ~t~G~~~al~~~~~~l~-~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~ 158 (509)
+|+|+++++..++.+++ ++|| .|+++.|+|..|...++..|++++.++++++.+|++|++.|++.++....+ .+
T Consensus 135 it~Ga~~al~~~~~~l~~~pGd----~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~ 210 (407)
T PLN02368 135 LTDGASKGVMQILNAVIRGEKD----GVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGIT 210 (407)
T ss_pred EcccHHHHHHHHHHHHcCCCCC----EEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCC
Confidence 99999999999999997 6888 999999999999999999999999999987778999999999999753211 25
Q ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCC-CCCceeEEEEecc
Q psy13922 159 PRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEP-YKSMELASFMSCS 237 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vi~i~S~S 237 (509)
+++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++..++.++.++..++... .+..++|+++|||
T Consensus 211 ~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfS 290 (407)
T PLN02368 211 VRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVS 290 (407)
T ss_pred eEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCC
Confidence 899999999999999999999999999999999999999999999987543456766654443321 1134699999999
Q ss_pred cccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhh
Q psy13922 238 KGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMD 317 (509)
Q Consensus 238 K~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 317 (509)
|.|+|++|+|+||++..++++++++.+.+.....++++.+ .|.++.
T Consensus 291 K~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~----------------------------------~Q~aa~ 336 (407)
T PLN02368 291 KGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVS----------------------------------GQIFMG 336 (407)
T ss_pred cccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcH----------------------------------HHHHHH
Confidence 9983499999999973224889999998875444567777 677766
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHH
Q psy13922 318 CVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIA 384 (509)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 384 (509)
.++++.+.++..|..+.++++.+++.+++|++.+.+.|+++||+.+..|+|+||+|+++.+|.+++.
T Consensus 337 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~lp~~~~~ 403 (407)
T PLN02368 337 LMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIKLPPKAIE 403 (407)
T ss_pred HHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCCCCHHHHH
Confidence 6666444344556667666778999999999999999999999999999999999999999987654
No 21
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-45 Score=385.18 Aligned_cols=355 Identities=18% Similarity=0.308 Sum_probs=283.1
Q ss_pred CCCC--CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPR--FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~--~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.|. .|+.+++++.+.+.. .....|+++.|.++||+++|+++++++|+.++++ +|++|+|+++++.++++++++
T Consensus 41 g~p~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~ 117 (403)
T PRK08636 41 GNPDGPTPQHIIDKLCESAQK---PKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITN 117 (403)
T ss_pred cCCCCCCCHHHHHHHHHHhcC---CccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCC
Confidence 4555 466777777666544 3345699999999999999999999999999998 799999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc--cCCceEEEEeCCCCCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK--HCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~--~~~~~~ivi~~p~NPtG~~~s 176 (509)
+|| .|++++|+|..+...++..|++++.++++.+.+|++|++.+.+.+++.-+ ..+++++++++||||||.++|
T Consensus 118 ~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s 193 (403)
T PRK08636 118 PGD----VAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVE 193 (403)
T ss_pred CCC----EEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCC
Confidence 998 99999999999999999999999999986555689998866444433211 136889999999999999999
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
.+++++|+++|++|+++||+||+|.++.+++ ....++.++.. . ..++|+++||||.| |+||+|+||++ +
T Consensus 194 ~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~-~~~~~~~~~~~-~-----~~~~i~~~S~SK~~-~~~GlRiG~iv---~ 262 (403)
T PRK08636 194 KSFYERLVALAKKERFYIISDIAYADITFDG-YKTPSILEVEG-A-----KDVAVESYTLSKSY-NMAGWRVGFVV---G 262 (403)
T ss_pred HHHHHHHHHHHHHcCcEEEEeccchhhccCC-CCCCChhcCCC-c-----cccEEEEEeccccc-CCccceeeeee---C
Confidence 9999999999999999999999999998863 23445554321 1 12478899999999 79999999998 8
Q ss_pred CHHHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 257 DPGVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 257 ~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
++++++.+.+.... ..+.+.+ .|.++..++. ...+
T Consensus 263 ~~~li~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~~~----------~~~~ 298 (403)
T PRK08636 263 NKKLVGALKKIKSWLDYGMFTP----------------------------------IQVAATIALD----------GDQS 298 (403)
T ss_pred CHHHHHHHHHHHHHhcccCChH----------------------------------HHHHHHHHHh----------CcHH
Confidence 99999999887652 3444455 3333333332 1123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
+++++++.++++++.+.+.|++. ++.+..|.+|+|+|++++-.. ...++.+++..+++++||.+.||..|
T Consensus 299 ~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l~~~~---------~~~~~~~l~~~ll~~~gV~v~pg~~f 368 (403)
T PRK08636 299 CVEEIRETYRKRRDVLIESFANA-GWELQKPRASMFVWAKIPEPA---------RHLGSLEFSKQLLTEAKVAVSPGIGF 368 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCcceEEEEECCCcc---------CCCCHHHHHHHHHHhCCEEEecchhh
Confidence 57889999999999999999998 788888999999998775110 01124666677888899999999988
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+. .+.+ +|||+++.++++++++++
T Consensus 369 ~~------------------------------------------------~~~~--------~iRi~~~~~~~~l~~~~~ 392 (403)
T PRK08636 369 GE------------------------------------------------YGDE--------YVRIALIENENRIRQAAR 392 (403)
T ss_pred Cc------------------------------------------------CCCC--------eEEEEecCCHHHHHHHHH
Confidence 76 3333 999999999999999999
Q ss_pred HHHHHHHHH
Q psy13922 496 KFREFHEEF 504 (509)
Q Consensus 496 ~l~~~~~~~ 504 (509)
+|+++++++
T Consensus 393 rl~~~l~~~ 401 (403)
T PRK08636 393 NIKKFLKEL 401 (403)
T ss_pred HHHHHHHhh
Confidence 999999763
No 22
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1.2e-45 Score=383.84 Aligned_cols=351 Identities=19% Similarity=0.308 Sum_probs=279.3
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCC-CCCC-cEEEeCCHHHHHHHHHHHhh
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQP-ADWQ-DVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~-~~~~-~i~~t~G~~~al~~~~~~l~ 97 (509)
|.|++ |+.+.+++.+.+.. ..+|++..|.++||+++++++++++|++ ++++ +|++|+|+++++..++++++
T Consensus 37 ~~p~~~~~~~~~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~ 111 (396)
T PRK09147 37 GEPKHPTPAFIKDALAANLDG-----LASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVI 111 (396)
T ss_pred CCCCCCCCHHHHHHHHHHhhh-----hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHc
Confidence 56665 56788887776643 4559999999999999999999999988 8885 89999999999999999999
Q ss_pred cC---CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 98 ED---VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 98 ~~---gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
++ || .|+++.|+|..+...++..|.+++.+|++++.+|.+|++.+++.+.+ ++++|+++|||||||.+
T Consensus 112 ~~~~~gd----~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~-----~~k~i~l~nP~NPTG~~ 182 (396)
T PRK09147 112 DRDGPGP----LVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA-----RTQLLFVCSPGNPTGAV 182 (396)
T ss_pred CCCCCCC----EEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhh-----ccEEEEEcCCCCCcCcc
Confidence 98 66 99999999999999999999999999998777899999999988866 79999999999999999
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
+|.+++++|+++|++|+++||+||+|.++.+++.....+........+.. ...++|+++||||.| |++|+|+||++
T Consensus 183 ~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~-~~~GlRiG~~~-- 258 (396)
T PRK09147 183 LPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRD-DFKRLVVFHSLSKRS-NVPGLRSGFVA-- 258 (396)
T ss_pred CCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCcc-ccccEEEEecccccc-CCccceeeeec--
Confidence 99999999999999999999999999999886421222222211111110 124699999999999 79999999998
Q ss_pred cCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHH
Q psy13922 255 NLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQF 333 (509)
Q Consensus 255 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 333 (509)
+++++++.+.+... ...+++.+ .|.+....+. .+
T Consensus 259 -~~~~l~~~~~~~~~~~~~~~~~~----------------------------------~q~a~~~~~~--------~~-- 293 (396)
T PRK09147 259 -GDAALLKKFLLYRTYHGCAMPPA----------------------------------VQAASIAAWN--------DE-- 293 (396)
T ss_pred -CCHHHHHHHHHHhhhcccCCCHH----------------------------------HHHHHHHHhc--------ch--
Confidence 89999999987665 23455555 3433222222 02
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 334 SREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 334 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
+++++.++.++++++.+.+.|++. +.+..|++|+|+|++++. ++.+++..+++++||.+.||.
T Consensus 294 -~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~~~--------------~~~~~~~~ll~~~gv~v~pg~ 356 (396)
T PRK09147 294 -AHVRENRALYREKFDAVTPILAPV--LDVQLPDAGFYLWAKVPG--------------DDTEFARRLYADYNVTVLPGS 356 (396)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEECCC--------------CHHHHHHHHHHhCCEEEeCCc
Confidence 237788899999999999999874 566678999999987751 245566778888999999999
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHH
Q psy13922 414 GFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAM 493 (509)
Q Consensus 414 ~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~ 493 (509)
.|+.. . ++..++..++||+|+.++++++++
T Consensus 357 ~f~~~------------------------------------------------~--~~~~~~~~~iRi~~~~~~~~l~~~ 386 (396)
T PRK09147 357 YLARE------------------------------------------------A--HGVNPGAGRVRIALVAPLAECVEA 386 (396)
T ss_pred ccccc------------------------------------------------c--cCCCCCCCeEEEEecCCHHHHHHH
Confidence 88751 1 001122339999999989999999
Q ss_pred HHHHHHHHH
Q psy13922 494 LEKFREFHE 502 (509)
Q Consensus 494 ~~~l~~~~~ 502 (509)
+++|+++++
T Consensus 387 l~rl~~~~~ 395 (396)
T PRK09147 387 AERIVDFCR 395 (396)
T ss_pred HHHHHHHhc
Confidence 999998763
No 23
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.2e-45 Score=383.13 Aligned_cols=342 Identities=20% Similarity=0.320 Sum_probs=280.0
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~ 98 (509)
++|.+ |+.+.+++.+.+.. ....+|++..|.++||+++++++.+++|.+++++ +|++|+|+++++..++..+++
T Consensus 40 ~~p~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~ 116 (389)
T PRK08068 40 GNPDQPTPEHIVEALQEAAEN---PANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMN 116 (389)
T ss_pred CCCCCCCCHHHHHHHHHHHhC---CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCC
Confidence 55665 46788888888775 3455699999999999999999998889888998 899999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| +|+++.|+|..|...++..|++++.+|++++.+|.+|++.+++.+.+ ++++|++++||||||.++|.+
T Consensus 117 ~gd----~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-----~~~~v~l~~P~NPTG~~~s~~ 187 (389)
T PRK08068 117 PGD----TILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE-----KAKLMYLNYPNNPTGAVATKA 187 (389)
T ss_pred CCC----EEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc-----cceEEEEECCCCCCCCcCCHH
Confidence 998 99999999999999999999999999998766788999999998876 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|++||+||+|.++.+++. ...++.... + ...++++++||||.| |++|+|+||++ +++
T Consensus 188 ~~~~l~~la~~~~~~ii~Deay~~~~~~~~-~~~s~~~~~-~-----~~~~~i~~~S~SK~~-g~~GlRiG~~~---~~~ 256 (389)
T PRK08068 188 FFEETVAFAKKHNIGVVHDFAYGAIGFDGQ-KPVSFLQTP-G-----AKDVGIELYTLSKTF-NMAGWRVAFAV---GNE 256 (389)
T ss_pred HHHHHHHHHHHcCeEEEEehhhhhhccCCC-CCcChhhCC-C-----ccCCEEEEecchhcc-CCccceeEeEe---cCH
Confidence 999999999999999999999999887642 223333221 1 123489999999999 79999999998 899
Q ss_pred HHHHHHHHhhhcc-cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccch-hhcccCCCCCCCCchHHHHHH
Q psy13922 259 GVKAMLHKSISAM-LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTV-MDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 259 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~~~~~~~~~~~ 336 (509)
++++.+.+....+ .+.+.. .|.+ ...+.+ ..++
T Consensus 257 ~l~~~l~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~~-----------~~~~ 291 (389)
T PRK08068 257 SVIEAINLLQDHLFVSLFGA----------------------------------IQDAAIEALLS-----------DQSC 291 (389)
T ss_pred HHHHHHHHHHhhccCCCChH----------------------------------HHHHHHHHHhC-----------cHHH
Confidence 9999998876533 222222 2333 233222 1145
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
++++++.++++++.+.+.|+++ |+.+.+|.|++|+|++++- ++ ++.++...+++++||.++||..|+
T Consensus 292 ~~~~~~~~~~~r~~~~~~L~~~-g~~~~~~~g~~~~~v~~~~-----------~~-~~~~~~~~l~~~~gi~v~pg~~f~ 358 (389)
T PRK08068 292 VAELVARYESRRNAFISACREI-GWEVDAPKGSFFAWMPVPK-----------GY-TSEQFADLLLEKAHVAVAPGNGFG 358 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECCC-----------CC-CHHHHHHHHHHhCCEEEecchHhC
Confidence 7888999999999999999998 8888899999999987751 11 355666677777899999999887
Q ss_pred CCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHH
Q psy13922 417 QVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEK 496 (509)
Q Consensus 417 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~ 496 (509)
. .+.+ ++|++++.+++.+++++++
T Consensus 359 ~------------------------------------------------~~~~--------~iRi~~~~~~~~l~~al~~ 382 (389)
T PRK08068 359 E------------------------------------------------HGEG--------YVRVGLLTDEERLREAVER 382 (389)
T ss_pred c------------------------------------------------cCCC--------eEEEEEcCCHHHHHHHHHH
Confidence 6 3333 9999999888999999999
Q ss_pred HHHH
Q psy13922 497 FREF 500 (509)
Q Consensus 497 l~~~ 500 (509)
|+++
T Consensus 383 l~~~ 386 (389)
T PRK08068 383 IGKL 386 (389)
T ss_pred HHHh
Confidence 9874
No 24
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-45 Score=380.96 Aligned_cols=343 Identities=19% Similarity=0.292 Sum_probs=284.3
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|.+ |+.+.+++.+.+.. .. ..|++..|.+++|+++++++.+++|+++++++|++|+|+++++..++..++++
T Consensus 40 g~~~~~~~~~v~~a~~~~~~~---~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~ 115 (387)
T PRK08960 40 GEPDFTTAEPIVAAGQAALAA---GH-TRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDP 115 (387)
T ss_pred CCCCCCCCHHHHHHHHHHHhc---CC-CccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCC
Confidence 55554 67899999888875 33 34999999999999999999999899999999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|..+...+...|.+++.++++.+++|.+|++.+++.+++ +++++++++||||||.++|.++
T Consensus 116 gd----~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----~~~~i~i~~p~NPtG~~~~~~~ 186 (387)
T PRK08960 116 GK----HWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA-----DTVGALVASPANPTGTLLSRDE 186 (387)
T ss_pred CC----EEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc-----cceEEEEECCCCCCCcCcCHHH
Confidence 98 99999999999999999999999999998777789999999998876 6889999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|+++|+++|+||+|.++.+++ ...++..+ ..++++++||||.| |++|+|+||++ ++++
T Consensus 187 ~~~l~~~~~~~~~~li~De~Y~~~~~~~--~~~~~~~~---------~~~vi~~~S~SK~~-g~~GlRiG~~~---~~~~ 251 (387)
T PRK08960 187 LAALSQALRARGGHLVVDEIYHGLTYGV--DAASVLEV---------DDDAFVLNSFSKYF-GMTGWRLGWLV---APPA 251 (387)
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCC--CCCChhhc---------cCCEEEEeeccccc-CCcccEEEEEE---cCHH
Confidence 9999999999999999999999998753 23343332 12499999999999 79999999998 7899
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+.+... ...+++.+ .|.++..++. +...++++
T Consensus 252 ~~~~~~~~~~~~~~~~s~~----------------------------------~q~a~~~~l~---------~~~~~~l~ 288 (387)
T PRK08960 252 AVPELEKLAQNLYISASTP----------------------------------AQHAALACFE---------PETLAILE 288 (387)
T ss_pred HHHHHHHHHhhhccCCCHH----------------------------------HHHHHHHHhh---------cCcHHHHH
Confidence 9999988766 34455666 5555544443 11234578
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCee-ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSC-NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++++.++++++.+.+.|+++ ++.+ ..|.+++|+|++++. ...++.+++.++++++||.+.||+.|+.
T Consensus 289 ~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~~~~~~-----------~~~~~~~~~~~ll~~~gi~v~pg~~f~~ 356 (387)
T PRK08960 289 ARRAEFARRRDFLLPALREL-GFGIAVEPQGAFYLYADISA-----------FGGDAFAFCRHFLETEHVAFTPGLDFGR 356 (387)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEEEeccc-----------cCCCHHHHHHHHHHhCCEEEcCchHhCC
Confidence 88999999999999999987 7665 468899999987751 0123566667788889999999998865
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
. .+.+ |||++++.+.+.|++++++|
T Consensus 357 ~-----------------------------------------------~~~~--------~iRi~~~~~~~~l~~al~~l 381 (387)
T PRK08960 357 H-----------------------------------------------QAGQ--------HVRFAYTQSLPRLQEAVERI 381 (387)
T ss_pred C-----------------------------------------------CCCC--------eEEEEecCCHHHHHHHHHHH
Confidence 1 1222 99999998899999999999
Q ss_pred HHHHH
Q psy13922 498 REFHE 502 (509)
Q Consensus 498 ~~~~~ 502 (509)
+++++
T Consensus 382 ~~~~~ 386 (387)
T PRK08960 382 ARGLR 386 (387)
T ss_pred HHHHh
Confidence 98764
No 25
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1.3e-45 Score=381.45 Aligned_cols=361 Identities=25% Similarity=0.444 Sum_probs=291.5
Q ss_pred HHHHHHHhhcC-CCCC----CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-c
Q psy13922 7 LSLQVLALVSL-PQLF----DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-D 78 (509)
Q Consensus 7 ~~~~~~~~~~~-~~~~----~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~ 78 (509)
.+++++..... ++.+ +.|++ |+.+.+++.+.+.+ ...+|++..|.+++|+++++++++.+|+.++++ +
T Consensus 8 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~ 83 (378)
T PRK07682 8 GIRKFFDLAANMEGVISLGVGEPDFVTPWNVREASIRSLEQ----GYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDE 83 (378)
T ss_pred HHHHHHHHHHhcCCeEEeCCCCCCCCCCHHHHHHHHHHHhc----CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 45555555432 2333 66666 45677887777654 245599999999999999999999889888886 7
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCC
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCN 158 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~ 158 (509)
|++|+|+++++.+++++++++|| +|+++.|+|..+...++..|.+++.++.+.+.+|.+|++.+++.+.+ +
T Consensus 84 i~~t~G~~~al~~~~~~l~~~gd----~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~ 154 (378)
T PRK07682 84 IIVTVGASQALDVAMRAIINPGD----EVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA-----K 154 (378)
T ss_pred EEEeCChHHHHHHHHHHhCCCCC----EEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc-----c
Confidence 99999999999999999999998 99999999999999999999999999987655689999999998876 7
Q ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 159 PRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
++++++++||||||.++|.+++++|+++|++|++++|+||+|.++.+++ .+.++..+. +. ..++++++||||
T Consensus 155 ~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~-----~~~~i~~~S~SK 226 (378)
T PRK07682 155 TKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE--AYTSFASIK-GM-----RERTILISGFSK 226 (378)
T ss_pred cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC--CCCChhhcc-cc-----cCCEEEEecCcc
Confidence 9999999999999999999999999999999999999999999999864 233444332 11 135899999999
Q ss_pred ccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhh
Q psy13922 239 GYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMD 317 (509)
Q Consensus 239 ~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 317 (509)
.| |+||+|+||++ +++++++.+.+... ...+++.+ .|.++.
T Consensus 227 ~~-~~~GlR~G~~~---~~~~~i~~l~~~~~~~~~~~~~~----------------------------------~q~a~~ 268 (378)
T PRK07682 227 GF-AMTGWRLGFIA---APVYFSEAMLKIHQYSMMCAPTM----------------------------------AQFAAL 268 (378)
T ss_pred cc-cChhhhhhhhh---cCHHHHHHHHHHHHhhccCCCHH----------------------------------HHHHHH
Confidence 99 79999999998 79999999987654 33455666 455544
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHH
Q psy13922 318 CVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (509)
.+++. ...+++++++.++++++.+.+.|+++ |+.+..|+|++|+|+.+... ++ ++.++
T Consensus 269 ~~l~~----------~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~----------~~-~~~~~ 326 (378)
T PRK07682 269 EALRA----------GNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSISST----------GL-SSEEF 326 (378)
T ss_pred HHHhC----------ChHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEeccCC----------CC-CHHHH
Confidence 44431 11236788899999999999999998 88888899999999876410 12 34566
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
+..+++++||.+.||..|+. .+.+
T Consensus 327 ~~~ll~~~gv~v~pg~~f~~------------------------------------------------~~~~-------- 350 (378)
T PRK07682 327 AEQLLLEEKVAVVPGSVFGE------------------------------------------------SGEG-------- 350 (378)
T ss_pred HHHHHHhCCEEEcCchhhCc------------------------------------------------CCCC--------
Confidence 67777888999999998865 3333
Q ss_pred eEEEEeecChHHHHHHHHHHHHHHHHH
Q psy13922 478 HFRTTILPQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 478 ~~Rls~~~~~~~i~~~~~~l~~~~~~~ 504 (509)
++|||++.+.++|++++++|+++++++
T Consensus 351 ~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 351 FIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred eEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 999999998999999999999988643
No 26
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-45 Score=382.08 Aligned_cols=342 Identities=24% Similarity=0.366 Sum_probs=280.3
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~ 98 (509)
|.|.+ |+.+.+++.+.+.. .....|+++.|.+++|+++++++++++|..++++ +|++|+|+++++..+++.+++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~ 115 (385)
T PRK09276 39 GDPDLPTPDHIIEAMCKAVED---PENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVN 115 (385)
T ss_pred CCCCCCCCHHHHHHHHHHHhC---CCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCC
Confidence 45554 66888888888875 2345699999999999999999998889888887 599999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| +|+++.|+|..|...++..|.+++.++++++.+|.+|++.+++.+.. ++++|++++||||||.+++.+
T Consensus 116 ~gd----~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~ 186 (385)
T PRK09276 116 PGD----VVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAK-----KAKLMFINYPNNPTGAVADLE 186 (385)
T ss_pred CCC----EEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccc-----cceEEEEeCCCCCCCCCCCHH
Confidence 998 99999999999999999999999999997666788999999888776 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|++||+||+|.++.+++. ...++.++.. . ..++|+++||||.| |++|+|+||++ +++
T Consensus 187 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~-~-----~~~~i~~~S~SK~~-g~~GlRiG~~i---~~~ 255 (385)
T PRK09276 187 FFEEVVDFAKKYDIIVCHDAAYSEIAYDGY-KPPSFLEVPG-A-----KDVGIEFHSLSKTY-NMTGWRIGFAV---GNA 255 (385)
T ss_pred HHHHHHHHHHHCCcEEEEecchhheecCCC-CCCChhccCC-C-----cCCEEEEecchhhc-CCcchhheeee---CCH
Confidence 999999999999999999999999987532 3444444311 0 23489999999999 79999999998 899
Q ss_pred HHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+.+.... ..+.+.+ .|.++..++. ....++
T Consensus 256 ~l~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~----------~~~~~~ 291 (385)
T PRK09276 256 DLIAGLGKVKSNVDSGVFQA----------------------------------IQEAGIAALN----------GPQEVV 291 (385)
T ss_pred HHHHHHHHHHhhccCCCCHH----------------------------------HHHHHHHHHc----------CcHHHH
Confidence 999999887652 2233434 3444433332 123347
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+++++.++++++.+.+.|+++ ++.+.++++++|+|++++ . ++ ++.+++..+++++||.++||..|+.
T Consensus 292 ~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~v~~~--~---------~~-~~~~l~~~ll~~~gi~v~~g~~f~~ 358 (385)
T PRK09276 292 EELRKIYQERRDILVEGLRKL-GLEVEPPKATFYVWAPVP--K---------GY-TSAEFATLLLDKAGVVVTPGNGFGE 358 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEECC--C---------CC-CHHHHHHHHHHhCCEEECCchhhCC
Confidence 888999999999999999998 888888999999998775 1 12 3556667778889999999998865
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+.+ ++||+|+.+++++.+++++|
T Consensus 359 ------------------------------------------------~~~~--------~~Ris~~~~~~~l~~~l~~l 382 (385)
T PRK09276 359 ------------------------------------------------YGEG--------YFRIALTVPDERIEEAVERI 382 (385)
T ss_pred ------------------------------------------------CCCC--------eEEEEeCCCHHHHHHHHHHH
Confidence 3333 99999999899999999998
Q ss_pred HH
Q psy13922 498 RE 499 (509)
Q Consensus 498 ~~ 499 (509)
++
T Consensus 383 ~~ 384 (385)
T PRK09276 383 KK 384 (385)
T ss_pred hh
Confidence 75
No 27
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2e-45 Score=380.62 Aligned_cols=342 Identities=23% Similarity=0.340 Sum_probs=281.8
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~ 98 (509)
|.|.+ |+.+.+++.+.+.. ....+|+++.|.+++|+++++++++.+|++++++ +|++|+|+++++..++..+++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~ 113 (383)
T TIGR03540 37 GDPDLPTPKHIVEALCKAAEN---PENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVN 113 (383)
T ss_pred CCCCCCCCHHHHHHHHHHHhC---CCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCC
Confidence 55665 67788888888765 3345699999999999999999998888888876 699999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| .|+++.|+|..+...++..|++++.+|.+++++|.+|++.+++.+.. ++++|++++||||||.+++.+
T Consensus 114 ~gd----~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~-----~~~~v~i~~P~NPtG~~~~~~ 184 (383)
T TIGR03540 114 PGD----IVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK-----KAKLMFINYPNNPTGAVAPLK 184 (383)
T ss_pred CCC----EEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc-----cceEEEEeCCCCCcCccCCHH
Confidence 998 99999999999999999999999999998766788999999988876 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|++||++||+||+|.++.+.+ ....++.++... ..++|+++||||.| |++|+|+||++ +++
T Consensus 185 ~~~~i~~~a~~~~~~ii~De~y~~l~~~~-~~~~~~~~~~~~------~~~~i~~~SfSK~~-g~~GlRiG~~i---~~~ 253 (383)
T TIGR03540 185 FFKELVEFAKEYNIIVCHDNAYSEITFDG-YKAPSFLEVDGA------KDVGIEFHSLSKTY-NMTGWRIGMAV---GNA 253 (383)
T ss_pred HHHHHHHHHHHcCEEEEEecchhhhccCC-CCCcCcccCCCc------ccCEEEEEeccccc-CCccceeeEEe---CCH
Confidence 99999999999999999999999998853 233444433210 12479999999999 79999999998 899
Q ss_pred HHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+...... ..+++.+ .|.++..+++ ...+|+
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~----------~~~~~~ 289 (383)
T TIGR03540 254 DLIAGLGKVKTNVDSGVFQA----------------------------------IQYAAIAALN----------GPQDVV 289 (383)
T ss_pred HHHHHHHHHHHhcccCCChH----------------------------------HHHHHHHHHh----------CCHHHH
Confidence 999999877653 2344444 4444444433 113447
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+++++.++++++.+.+.|++. |+.+.++++++|+|++++ . ++ ++.+++..+++++||.++||..|+.
T Consensus 290 ~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~l~--~---------~~-~~~~~~~~ll~~~gi~v~~g~~f~~ 356 (383)
T TIGR03540 290 KEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFYVWVPVP--E---------GY-TSAEFAARLLEETGVVVTPGVGFGE 356 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceEEEEECC--C---------CC-CHHHHHHHHHHHCCEEEecchhhCc
Confidence 788899999999999999998 888889999999998775 1 22 3556677778889999999998865
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+.+ ++|++++.+++++++++++|
T Consensus 357 ------------------------------------------------~~~~--------~~Ris~~~~~~~l~~~l~~l 380 (383)
T TIGR03540 357 ------------------------------------------------YGEG--------YIRISLTVPDERLEEAVARI 380 (383)
T ss_pred ------------------------------------------------cCCC--------eEEEEecCCHHHHHHHHHHH
Confidence 2323 99999998899999999998
Q ss_pred HH
Q psy13922 498 RE 499 (509)
Q Consensus 498 ~~ 499 (509)
++
T Consensus 381 ~~ 382 (383)
T TIGR03540 381 KK 382 (383)
T ss_pred hh
Confidence 75
No 28
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.8e-45 Score=383.43 Aligned_cols=350 Identities=20% Similarity=0.348 Sum_probs=279.1
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcC--CCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDG--QPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA 122 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~ 122 (509)
....|.+..|.++||+++|+++++++| .++++++|++|+|+++++.+++.+++++|| .|+++.|+|.++...+.
T Consensus 87 ~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD----~Vlv~~P~Y~~f~~~~~ 162 (447)
T PLN02607 87 ENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGD----ALLVPTPYYPGFDRDLR 162 (447)
T ss_pred hhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCC----EEEEcCCCCcchHHHHH
Confidence 344588899999999999999998877 358899999999999999999999999998 99999999999988777
Q ss_pred -hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 123 -EFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 123 -~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
..|+++++|+.+.+.+|.+|++.++++++...+. .++++|+++|||||||.++|++++++|+++|+++|++||+||+|
T Consensus 163 ~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiY 242 (447)
T PLN02607 163 WRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIY 242 (447)
T ss_pred hcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 5799999999887777889999999999864332 47899999999999999999999999999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALV 280 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (509)
.++.|++ .++.++.++..+.+..+...++++++||||.| |++|+|+||++. .++.++..++.... +..++.+
T Consensus 243 a~~~f~~-~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~f-g~~GlRvG~ivs--~n~~l~~~~~~~~~-~~~~s~~--- 314 (447)
T PLN02607 243 SGSVFSA-SEFVSVAEIVEARGYKGVAERVHIVYSLSKDL-GLPGFRVGTIYS--YNDKVVTTARRMSS-FTLVSSQ--- 314 (447)
T ss_pred cccccCC-CCcccHHHHHhhcCCCCCcCcEEEEEcchhcC-CCCcceEEEEEE--cCHHHHHHHHHHhh-cCCCCHH---
Confidence 9988864 35677777644332111124589999999999 899999999973 47888887765543 3345666
Q ss_pred ccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy13922 281 SLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEG 360 (509)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 360 (509)
.|.++..+++ ++.|. .++++..++.++++++.+.+.|++. |
T Consensus 315 -------------------------------~q~~~~~~L~-----d~~~~--~~~l~~~r~~l~~~~~~~~~~L~~~-g 355 (447)
T PLN02607 315 -------------------------------TQHLLASMLS-----DEEFT--ENYIRTNRERLRKRYEMIVQGLRRA-G 355 (447)
T ss_pred -------------------------------HHHHHHHHhC-----CchhH--HHHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 4555555555 22121 1237788999999999999999998 8
Q ss_pred CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHH
Q psy13922 361 MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAK 440 (509)
Q Consensus 361 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~ 440 (509)
+.+.++++|+|+|++++ ... .......+.+++..+++++||.+.||..|+.
T Consensus 356 i~~~~~~ag~fvw~~L~--~~~----~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~----------------------- 406 (447)
T PLN02607 356 IECLKGNAGLFCWMNLS--PLL----ETPTREGELALWDSILREVKLNISPGSSCHC----------------------- 406 (447)
T ss_pred CCcccCCeeEEEEEEch--Hhh----cCCCchhHHHHHHHHHHhCCEEEcCccccCC-----------------------
Confidence 88889999999998874 100 0000112335556788889999999998876
Q ss_pred HhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHHHHhh
Q psy13922 441 AKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
...+ |||++|+ .+++.|+++++||.+++++.+.+
T Consensus 407 -------------------------~~~g--------~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~~ 441 (447)
T PLN02607 407 -------------------------SEPG--------WFRVCFANMSEDTLEVALKRIHRFMDRRKTA 441 (447)
T ss_pred -------------------------CCCC--------EEEEEeccCCHHHHHHHHHHHHHHHHHHHhh
Confidence 2223 9999999 59999999999999999876543
No 29
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-45 Score=377.05 Aligned_cols=362 Identities=25% Similarity=0.396 Sum_probs=293.8
Q ss_pred HHHHHHHHhhc-CCCC----CCCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCc
Q psy13922 6 SLSLQVLALVS-LPQL----FDDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQD 78 (509)
Q Consensus 6 ~~~~~~~~~~~-~~~~----~~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~ 78 (509)
+.++.+..++. .++. .|.|++ |+.+.+++.+.+.+ .. ..|+++.|.+++|+++++++.+++|..+++++
T Consensus 11 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~---~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~ 86 (382)
T PRK06108 11 SGIREVANAGRGREGVLPLWFGESDLPTPDFIRDAAAAALAD---GE-TFYTHNLGIPELREALARYVSRLHGVATPPER 86 (382)
T ss_pred hHHHHHHHHHhccCCeEEecCCCCCCCCCHHHHHHHHHHHhc---CC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcce
Confidence 35666666653 3333 367766 56888888888776 33 34999999999999999999988898899999
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCC-CCCCCCHHHHHHHHHhhhccC
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDES-KQWGLPISELERSITEARKHC 157 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~L~~~i~~~~~~~ 157 (509)
|++|+|+++++..++..++++|| .|+++.|+|..+...++..|++++.++.+.+ .+|.+|++.+++.+++
T Consensus 87 i~~t~g~~~al~~~~~~l~~~gd----~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~----- 157 (382)
T PRK06108 87 IAVTSSGVQALMLAAQALVGPGD----EVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP----- 157 (382)
T ss_pred EEEeCChHHHHHHHHHHhcCCCC----EEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc-----
Confidence 99999999999999999999998 9999999999999999999999999998753 4688999999998876
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 158 NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.++++....++.++... ..++++++|||
T Consensus 158 ~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~------~~~~i~~~S~S 231 (382)
T PRK06108 158 RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEP------DDRIIFVNSFS 231 (382)
T ss_pred cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCC------cCCEEEEeech
Confidence 789999999999999999999999999999999999999999999988622233344433211 23589999999
Q ss_pred cccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchh
Q psy13922 238 KGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVM 316 (509)
Q Consensus 238 K~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 316 (509)
|.| |++|+|+||++ +++++++.+.+... ...+++.+ .|.+.
T Consensus 232 K~~-g~~G~RiG~~~---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~q~a~ 273 (382)
T PRK06108 232 KNW-AMTGWRLGWLV---APPALGQVLEKLIEYNTSCVAQF----------------------------------VQRAA 273 (382)
T ss_pred hhc-cCcccceeeee---CCHHHHHHHHHHHHhcccCCChH----------------------------------HHHHH
Confidence 999 79999999998 78999999887654 23445555 44444
Q ss_pred hcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHH
Q psy13922 317 DCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVL 396 (509)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (509)
..++.. ..++++++++.++++++.+.+.|++++++++..|++++|+|++++ +..++.+
T Consensus 274 ~~~l~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~------------~~~~~~~ 331 (382)
T PRK06108 274 VAALDE----------GEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIP------------GVTDSLA 331 (382)
T ss_pred HHHHhC----------ChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCC------------CCCCHHH
Confidence 444331 123467788899999999999999888899888999999998775 1123556
Q ss_pred HHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCc
Q psy13922 397 YAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGT 476 (509)
Q Consensus 397 ~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (509)
++..+++++||.++||..|+. .+.+
T Consensus 332 ~~~~ll~~~gV~v~pg~~f~~------------------------------------------------~~~~------- 356 (382)
T PRK06108 332 LAKRLVDEAGLGLAPGTAFGP------------------------------------------------GGEG------- 356 (382)
T ss_pred HHHHHHHhCCEEEeCchhhCC------------------------------------------------CCCC-------
Confidence 677788889999999998865 3333
Q ss_pred eeEEEEeecChHHHHHHHHHHHHHHH
Q psy13922 477 YHFRTTILPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 477 ~~~Rls~~~~~~~i~~~~~~l~~~~~ 502 (509)
++|+|++.++++|++++++|+++++
T Consensus 357 -~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 357 -FLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred -EEEEEecCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999875
No 30
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.9e-45 Score=377.83 Aligned_cols=351 Identities=19% Similarity=0.315 Sum_probs=277.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCC--CCCC-cEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQP--ADWQ-DVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~--~~~~-~i~~t~G~~~al~~~~~~l 96 (509)
|.|.+ |+.+.+++.+.+.. ...|+++.|.+++|+++|+++++++|++ ++++ +|++|+|+++++..+++.+
T Consensus 36 ~~p~~~~~~~~~~a~~~~~~~-----~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l 110 (393)
T TIGR03538 36 GEPKHPTPAFVLEALRENLHG-----LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAV 110 (393)
T ss_pred CCCCCCCCHHHHHHHHHHhhc-----cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHH
Confidence 55665 56788888776543 4559999999999999999999988876 6885 8999999999999999999
Q ss_pred hcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 97 IEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
+++|| ...|+++.|+|..|...++..|.+++.++++++++|.+|++.+++.+.+ ++++|++++||||||.+++
T Consensus 111 ~~~gd--~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----~~k~i~l~~p~NPtG~~~s 183 (393)
T TIGR03538 111 INPGQ--APLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR-----RCQLLFVCSPGNPTGAVLS 183 (393)
T ss_pred cCCCC--cceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh-----cceEEEEeCCCCCcCcccC
Confidence 99987 1239999999999999999999999999998777789999999998876 7999999999999999999
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
.+++++|+++|+++|++||+||+|.++.+++.....+......+.+. ....++|+++||||.| |++|+|+||++ +
T Consensus 184 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~-~~~GlRvG~~i---~ 258 (393)
T TIGR03538 184 LDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGR-DDFRRCLVFHSLSKRS-NLPGLRSGFVA---G 258 (393)
T ss_pred HHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccc-cccccEEEEecchhhc-CCcccceEEEe---c
Confidence 99999999999999999999999999987642233333322222211 0134699999999999 79999999998 8
Q ss_pred CHHHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 257 DPGVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 257 ~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
++++++.+.+.... ..+++.+ .|.++...+. .+ +
T Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~--------~~---~ 293 (393)
T TIGR03538 259 DAEILKAFLRYRTYHGCAMPIP----------------------------------TQLASIAAWN--------DE---Q 293 (393)
T ss_pred CHHHHHHHHHHHHhhccCcCHH----------------------------------HHHHHHHHhc--------Ch---H
Confidence 99999999877652 3345555 4444333332 02 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
++++.++.++++++.+.+.|++. +.+..|.+|+|+|++++. ++.+++..+++++||.+.||+.|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~gg~f~~~~~~~--------------~~~~~~~~l~~~~gV~v~pg~~f 357 (393)
T TIGR03538 294 HVRENRALYREKFAAVLEILGQV--LDLELPDAGFYLWPKVPG--------------DDEAFARALYEEENVTVLPGRFL 357 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh--CcccCCCeeEEEEEECCC--------------CHHHHHHHHHHHCCEEEeCCccc
Confidence 37788889999999999999874 456679999999987651 24556677778899999999988
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+.. . .+..++..++||+|+.++++++++++
T Consensus 358 ~~~------------------------------------------------~--~~~~~~~~~~Ris~~~~~~~l~~~l~ 387 (393)
T TIGR03538 358 ARE------------------------------------------------A--EGVNPGEGRVRIALVAPLEECVEAAE 387 (393)
T ss_pred ccc------------------------------------------------c--cCCCCCCCEEEEEecCCHHHHHHHHH
Confidence 751 0 00122233999999988999999999
Q ss_pred HHHHH
Q psy13922 496 KFREF 500 (509)
Q Consensus 496 ~l~~~ 500 (509)
+|+++
T Consensus 388 ~l~~~ 392 (393)
T TIGR03538 388 RIRSF 392 (393)
T ss_pred HHHHh
Confidence 99875
No 31
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5.4e-45 Score=386.47 Aligned_cols=348 Identities=19% Similarity=0.351 Sum_probs=275.4
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcC--CCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH-
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDG--QPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA- 122 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~- 122 (509)
...|++..|.++||+++|+++++.+| +.+++++|++|+|+++++..++.+++++|| .|+++.|+|..+...+.
T Consensus 87 ~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD----~Vlv~~P~Y~~~~~~~~~ 162 (496)
T PLN02376 87 IANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGD----VFLIPSPYYAAFDRDLRW 162 (496)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCC----EEEECCCCccchHHHHHh
Confidence 34588999999999999999998888 668999999999999999999999999999 99999999999998887
Q ss_pred hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc-cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 123 EFNMEQIGYYLDESKQWGLPISELERSITEARK-HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 123 ~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~-~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
..|+++++++++.+.+|++|++.++++++...+ ..++++|+++|||||||.++|++++++|+++|+++|++||+||+|.
T Consensus 163 ~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~ 242 (496)
T PLN02376 163 RTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYA 242 (496)
T ss_pred hCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCcc
Confidence 589999999997666789999999887654322 1378999999999999999999999999999999999999999999
Q ss_pred cccccCCCccccHHHHHHHhCCCC-CCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhh
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPY-KSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALV 280 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (509)
++.|.+. .+.++.++..+..... ...++++++||||.| |+||+|+||++. .++.+.+.++.... +..++.+
T Consensus 243 ~~~f~~~-~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~-glpGlRvG~li~--~~~~l~~~~~~~~~-~~~vs~~--- 314 (496)
T PLN02376 243 ATVFAGG-DFVSVAEVVNDVDISEVNVDLIHIVYSLSKDM-GLPGFRVGIVYS--FNDSVVSCARKMSS-FGLVSSQ--- 314 (496)
T ss_pred ccccCCC-CcccHHHhhccccccccCCCeEEEEEeccccC-CCCcceEEEEEE--CCHHHHHHHHHHhh-cCCCCHH---
Confidence 9988643 5677776644321100 012467789999999 799999999982 36777776655443 3346666
Q ss_pred ccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy13922 281 SLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEG 360 (509)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 360 (509)
.|.++..+++ ++.|. .+++++.++.++++++.+.+.|++. |
T Consensus 315 -------------------------------~Q~a~~~~L~-----d~~~~--~~~l~~~r~~l~~r~~~l~~~L~~~-g 355 (496)
T PLN02376 315 -------------------------------TQLMLASMLS-----DDQFV--DNFLMESSRRLGIRHKVFTTGIKKA-D 355 (496)
T ss_pred -------------------------------HHHHHHHHhC-----ChhHH--HHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 5666666665 22220 2347788899999999999999987 8
Q ss_pred CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHH
Q psy13922 361 MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAK 440 (509)
Q Consensus 361 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~ 440 (509)
+.+.++++|+|+|++++... . .......+.+++..++++.||.+.||..|+.
T Consensus 356 i~~~~~~aG~flwi~l~~~~--~---~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~----------------------- 407 (496)
T PLN02376 356 IACLTSNAGLFAWMDLRHLL--R---DRNSFESEIELWHIIIDKVKLNVSPGSSFRC----------------------- 407 (496)
T ss_pred CcccCCCceEEEEEEchhhh--c---cCCchhHHHHHHHHHHHcCCEEEeCccccCC-----------------------
Confidence 88888999999998875110 0 0000112355667788888999999999876
Q ss_pred HhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHHHH
Q psy13922 441 AKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~~ 505 (509)
.+.+ ||||+|+ .++++|+++++||++++.+.+
T Consensus 408 -------------------------~~~g--------~~Ri~fa~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 408 -------------------------TEPG--------WFRICFANMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred -------------------------CCCC--------EEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence 2223 9999999 589999999999999997544
No 32
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-45 Score=378.88 Aligned_cols=344 Identities=20% Similarity=0.324 Sum_probs=281.1
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCc-EEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQD-VILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~-i~~t~G~~~al~~~~~~l~~ 98 (509)
++|.+ |+.+++++.+.+.. .....|+++.|.++||+++++++++++|+++++++ |++|+|+++++..++.++++
T Consensus 43 g~p~~~~p~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~ 119 (394)
T PRK05942 43 GNPDGAAPQPVIEAAIAALAD---PQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVN 119 (394)
T ss_pred CCCCCCCCHHHHHHHHHHHhC---CCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCC
Confidence 45554 56678887776654 33456999999999999999999998898888884 99999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| +|+++.|+|..+...+...|.+++.++.+.+++|.+|++.+++.+.+ ++++|++++||||||.++|.+
T Consensus 120 ~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----~~k~i~l~~P~NPtG~~~s~~ 190 (394)
T PRK05942 120 PGD----VVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ-----QAKILYFNYPSNPTTATAPRE 190 (394)
T ss_pred CCC----EEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc-----cceEEEEcCCCCCCCCcCCHH
Confidence 998 99999999999999999999999999998777789999999998876 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|++||+||+|.++.+++. ...++.++.. . ...+|+++||||.| |++|+|+||++ +++
T Consensus 191 ~~~~i~~~a~~~~~~iI~De~y~~~~~~~~-~~~~~~~~~~-~-----~~~~i~~~SfSK~~-~~~GlRiG~i~---~~~ 259 (394)
T PRK05942 191 FFEEIVAFARKYEIMLVHDLCYAELAFDGY-QPTSLLEIPG-A-----KDIGVEFHTLSKTY-NMAGWRVGFVV---GNR 259 (394)
T ss_pred HHHHHHHHHHHcCeEEEEeccchhhccCCC-CCCChhhCCC-c-----cccEEEEecchhcc-CChhhheeeee---cCH
Confidence 999999999999999999999999988542 3344443311 0 12378899999999 79999999998 799
Q ss_pred HHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+...... ..+.+.+ .|.++..+++ ...+++
T Consensus 260 ~l~~~l~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~----------~~~~~~ 295 (394)
T PRK05942 260 HIIQGLRTLKTNLDYGIFSA----------------------------------LQKAAETALQ----------LPDSYL 295 (394)
T ss_pred HHHHHHHHHHhhcccCCCHH----------------------------------HHHHHHHHHh----------CcHHHH
Confidence 999999877652 3345555 4444444433 112347
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++.++.++++++.+.+.|++. ++.+.++++++|+|++++. ++ ++.+++.++++++||.+.||..|+.
T Consensus 296 ~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~~~~~~-----------~~-~~~~~~~~~l~~~gV~v~~g~~f~~ 362 (394)
T PRK05942 296 QQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMYLWVPCPV-----------GM-GSTDFALNVLQKTGVVVTPGNAFGE 362 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeEEEEECCC-----------CC-CHHHHHHHHHHHCCEEEeCChhhCc
Confidence 788899999999999999988 8888889999999987751 12 3455567788899999999998865
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+.+ ++|++++.+.+.+.+++++|
T Consensus 363 ------------------------------------------------~~~~--------~iRis~~~~~~~l~~~l~~l 386 (394)
T PRK05942 363 ------------------------------------------------GGEG--------YVRISLIADCDRLGEALDRL 386 (394)
T ss_pred ------------------------------------------------CCCC--------eEEEEecCCHHHHHHHHHHH
Confidence 3333 99999998889999999999
Q ss_pred HHHH
Q psy13922 498 REFH 501 (509)
Q Consensus 498 ~~~~ 501 (509)
.++.
T Consensus 387 ~~~~ 390 (394)
T PRK05942 387 KQAG 390 (394)
T ss_pred HHhh
Confidence 8754
No 33
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-45 Score=378.63 Aligned_cols=356 Identities=22% Similarity=0.345 Sum_probs=292.5
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|.+ |+.+.+++.+.+.+ .. .+|+++.|.+++|+++++++.+.+|..+.+++|++|+|+++++..++.+++++
T Consensus 41 g~p~~~~~~~~~~~~~~~~~~---~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~ 116 (402)
T PRK06107 41 GEPDFDTPDHIKQAAVAAIER---GE-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEA 116 (402)
T ss_pred CCCCCCCCHHHHHHHHHHHHc---CC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCC
Confidence 55555 57888888888875 33 45999999999999999999988898889999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..|...+...+.+++.++.+++.+|.+|++.+++.+.+ ++++|++++|+||||.++|.++
T Consensus 117 gd----~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~s~~~ 187 (402)
T PRK06107 117 GD----EVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP-----RTRWLILNAPSNPTGAVYSRAE 187 (402)
T ss_pred CC----EEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc-----CceEEEEECCCCCCCcCcCHHH
Confidence 98 99999999999999999899999999887666788999999998876 7999999999999999999999
Q ss_pred HHHHHHHHHHC-CcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 180 IQDIIKFAHRE-KLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 180 l~~l~~ia~~~-~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
+++|+++|+++ ++++|+||+|.++.+.+. .+.++.++.++. ..++++++||||.| |+||+|+||++ +++
T Consensus 188 ~~~l~~~a~~~~~~~iI~De~y~~l~~~~~-~~~~~~~~~~~~-----~~~vi~~~S~SK~~-~~pGlRiG~~~---~~~ 257 (402)
T PRK06107 188 LRALADVLLRHPHVLVLTDDIYDHIRFDDE-PTPHLLAAAPEL-----RDRVLVTNGVSKTY-AMTGWRIGYAA---GPA 257 (402)
T ss_pred HHHHHHHHHHcCCeEEEEehhccccccCCC-CCCCHHHhCcCc-----cCCEEEEeccchhh-cCcccceeeee---cCH
Confidence 99999999998 999999999999988642 445665554332 23599999999999 79999999998 899
Q ss_pred HHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+..... ...+++.+ .|.++..++.. ...++
T Consensus 258 ~~~~~~~~~~~~~~~~~s~~----------------------------------~q~~~~~~l~~----------~~~~~ 293 (402)
T PRK06107 258 DLIAAINKLQSQSSSCPSSI----------------------------------SQAAAAAALNG----------DQSFV 293 (402)
T ss_pred HHHHHHHHHHHhcccCCChH----------------------------------HHHHHHHHhcC----------ChHHH
Confidence 99999988776 34567777 56666555541 11347
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCC-HHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLP-AKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
++.++.++++++.+.+.|++++|+.+.+|+||+|+|+++..- .... ....+..++.+++..+++++||.++||..|+
T Consensus 294 ~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg 371 (402)
T PRK06107 294 TESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTT--PEGKVLETDQDVVLYLLDSAGVAVVQGTAYG 371 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeeccccccccc--ccccCCCCHHHHHHHHHHhCCEEEeCccccC
Confidence 888889999999999999998788888999999999877310 0000 0000122456667788899999999999887
Q ss_pred CCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHH
Q psy13922 417 QVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEK 496 (509)
Q Consensus 417 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~ 496 (509)
. .+ +||++|+.+++++++++++
T Consensus 372 ~------------------------------------------------~~----------~iRis~~~~~e~l~~~l~~ 393 (402)
T PRK06107 372 L------------------------------------------------SP----------YFRLSIATSLETLEEACAR 393 (402)
T ss_pred C------------------------------------------------CC----------eEEEEeCCCHHHHHHHHHH
Confidence 6 44 9999999999999999999
Q ss_pred HHHHHHHH
Q psy13922 497 FREFHEEF 504 (509)
Q Consensus 497 l~~~~~~~ 504 (509)
|++++++.
T Consensus 394 l~~~l~~~ 401 (402)
T PRK06107 394 IERAVAAL 401 (402)
T ss_pred HHHHHHhc
Confidence 99998754
No 34
>PRK07324 transaminase; Validated
Probab=100.00 E-value=7.6e-45 Score=374.62 Aligned_cols=335 Identities=22% Similarity=0.308 Sum_probs=280.3
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|.+ |+.+ +++.+++.. ..+ +|++..|.++||+++++++. .+++++|++|+|+++++.+++.+++++
T Consensus 34 ~e~~~~~~~~~-~~~~~~~~~---~~~-~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~al~~~~~~l~~~ 103 (373)
T PRK07324 34 EELLALAGKNP-EAFYQELGQ---KKL-TYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGANFLVLYALVEP 103 (373)
T ss_pred HHHHhccCcch-HHHHHHHhc---CCc-cCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHHHHHHHHHhCCC
Confidence 66665 4566 888888776 444 49999999999999999984 257899999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|..+...++..|.+++.++.+++++|.+|++.+++.+.. ++++|++++||||||.++++++
T Consensus 104 gd----~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~-----~~kli~i~~p~NPtG~~~~~~~ 174 (373)
T PRK07324 104 GD----HVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRP-----NTKLICINNANNPTGALMDRAY 174 (373)
T ss_pred CC----EEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCC-----CCcEEEEeCCCCCCCCCCCHHH
Confidence 98 99999999999999999999999999998777788999999988776 7999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|+++|++||+||+|.++.+++ ...++.+.. .++|+++||||.| |++|+|+||++ ++++
T Consensus 175 l~~i~~~a~~~~~~ii~De~y~~l~~~~--~~~s~~~~~---------~~~I~~~s~SK~~-~~~G~RiG~i~---~~~~ 239 (373)
T PRK07324 175 LEEIVEIARSVDAYVLSDEVYRPLDEDG--STPSIADLY---------EKGISTNSMSKTY-SLPGIRVGWIA---ANEE 239 (373)
T ss_pred HHHHHHHHHHCCCEEEEEccccccccCC--CCCChhhcc---------CCEEEEecchhhc-CCccceeEEEe---cCHH
Confidence 9999999999999999999999988753 244444331 2389999999999 79999999998 7899
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++++.+.+. ...+.+.+ .|.+...+++ ....+++
T Consensus 240 li~~~~~~~~~~~~~~~~~----------------------------------~q~~a~~~l~----------~~~~~l~ 275 (373)
T PRK07324 240 VIDILRKYRDYTMICAGVF----------------------------------DDMLASLALE----------HRDAILE 275 (373)
T ss_pred HHHHHHHHhCcEEecCChH----------------------------------HHHHHHHHHc----------CHHHHHH
Confidence 9999998876 23455555 3333333332 1223478
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
++++.++++++.+.+.|.+.+++.+..|.++++.|+.++.+ .++.+++.++++++||.++||+.|+.
T Consensus 276 ~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~------------~~~~~~~~~ll~~~gv~v~pg~~F~~- 342 (373)
T PRK07324 276 RNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVD------------MPSEDFCLKLLKETGVLLVPGNRFDL- 342 (373)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCC------------CCHHHHHHHHHHhcCEEEECccccCC-
Confidence 88899999999999999988788888899999888877632 24667788888999999999998876
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
++ +||||++.+++.|+++++||+
T Consensus 343 -----------------------------------------------~~----------~iRis~~~~~~~l~~~l~rl~ 365 (373)
T PRK07324 343 -----------------------------------------------EG----------HVRIGYCCDTETLKKGLKKLS 365 (373)
T ss_pred -----------------------------------------------CC----------eEEEEecCCHHHHHHHHHHHH
Confidence 44 999999999999999999999
Q ss_pred HHHHHH
Q psy13922 499 EFHEEF 504 (509)
Q Consensus 499 ~~~~~~ 504 (509)
++++++
T Consensus 366 ~~l~~~ 371 (373)
T PRK07324 366 EFLREF 371 (373)
T ss_pred HHHHhc
Confidence 999765
No 35
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-44 Score=375.34 Aligned_cols=347 Identities=27% Similarity=0.380 Sum_probs=286.8
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|.+ |+.+.+++.+++.. . ..+|.+..|.+++|+++++++++++|.++++++|++|+|+++++.+++.+++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~---~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 116 (391)
T PRK08361 41 GEPDFDTPKNIKEAAKRALDE---G-WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEE 116 (391)
T ss_pred CCCCCCCCHHHHHHHHHHHhc---C-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCC
Confidence 56665 46788888887765 3 334988899999999999999988888899999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|+ +|++++|+|..+...++..|++++.++++++++|.+|++.+++.++. +++++++++||||||.+++.++
T Consensus 117 g~----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-----~~~~v~i~~p~NPtG~~~~~~~ 187 (391)
T PRK08361 117 GD----EVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK-----RTRMIVINYPNNPTGATLDKEV 187 (391)
T ss_pred CC----EEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc-----ccEEEEEeCCCCCCCcCcCHHH
Confidence 98 99999999999999999999999999998777789999999999887 7999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|+++++++|+||+|.++.+++. ...++.+.. ..++++++||||.| |++|+|+||++ .+++
T Consensus 188 ~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~--------~~~~i~~~s~SK~~-~~~GlRiG~~~---~~~~ 254 (391)
T PRK08361 188 AKAIADIAEDYNIYILSDEPYEHFLYEGA-KHYPMIKYA--------PDNTILANSFSKTF-AMTGWRLGFVI---APEQ 254 (391)
T ss_pred HHHHHHHHHHcCeEEEEEcccccceeCCC-CCCCHhhcC--------CCCEEEEecCchhc-CCcHhhhhhhc---cCHH
Confidence 99999999999999999999999987532 334444332 12488999999999 79999999998 7889
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+.+... ...+++.+ .|.++..++. ++.+. ++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~-----~~~~~---~~~~ 292 (391)
T PRK08361 255 VIKDMIKLHAYIIGNVASF----------------------------------VQIAGIEALR-----SKESW---KAVE 292 (391)
T ss_pred HHHHHHHHHhhhccCCChH----------------------------------HHHHHHHHhc-----CCccc---HHHH
Confidence 9998877654 33455555 4444444443 11122 3478
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
++++.++++++.+.+.|++++++.+.+|+|++|+|++++. .++ ++.+++..+++++||.+.||..|+.
T Consensus 293 ~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~----------~~~-~~~~l~~~l~~~~gv~v~pg~~f~~- 360 (391)
T PRK08361 293 EMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDE----------TGM-SSEDFAEWLLEKARVVVIPGTAFGK- 360 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCC----------CCC-CHHHHHHHHHHhCCEEEcCchhhCC-
Confidence 8899999999999999999888888999999999987751 122 3555666777789999999998876
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
.+.+ +|||+++.+++++++++++|+
T Consensus 361 -----------------------------------------------~~~~--------~iRi~~~~~~~~l~~al~~l~ 385 (391)
T PRK08361 361 -----------------------------------------------AGEG--------YIRISYATSKEKLIEAMERME 385 (391)
T ss_pred -----------------------------------------------CCCC--------EEEEEecCCHHHHHHHHHHHH
Confidence 3333 999999998999999999999
Q ss_pred HHHHH
Q psy13922 499 EFHEE 503 (509)
Q Consensus 499 ~~~~~ 503 (509)
+++++
T Consensus 386 ~~l~~ 390 (391)
T PRK08361 386 KALEE 390 (391)
T ss_pred HHHhc
Confidence 98864
No 36
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.5e-44 Score=376.32 Aligned_cols=352 Identities=20% Similarity=0.324 Sum_probs=280.8
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~ 98 (509)
|.|.+ |+.+++++.+.+.. ....+|+++.|.+++|+++++++++++|++++++ +|++|+|+++++..++..+++
T Consensus 38 ~~p~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~ 114 (405)
T PRK09148 38 GNPDLPTPQHIVDKLCETAQD---PRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITA 114 (405)
T ss_pred CCCCCCCCHHHHHHHHHHHcC---cccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcC
Confidence 55654 57888888777654 3345699999999999999999998889888887 899999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| +|+++.|+|..+...++..|++++.++.++++.|..+ +++.++... ++++++++++||||||.++|.+
T Consensus 115 ~gd----~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~---l~~~~~~~~--~~~~~v~l~~P~NPtG~~~s~~ 185 (405)
T PRK09148 115 PGD----VILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPA---LERAVRHSI--PKPIALIVNYPSNPTAYVADLD 185 (405)
T ss_pred CCC----EEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccC---HHHHHhhcc--ccceEEEEeCCCCCCCcCCCHH
Confidence 998 9999999999999999999999999999766555434 444443211 1689999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|++||+||+|.++.+++. .+.++.++. . . ..++|+++||||.+ |+||+|+||++ +++
T Consensus 186 ~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~~~s~~~~~-~---~--~~~~i~~~SfSK~~-~~pGlR~G~~v---~~~ 254 (405)
T PRK09148 186 FYKDVVAFAKKHDIIILSDLAYSEIYFDGN-PPPSVLQVP-G---A--KDVTVEFTSMSKTF-SMAGWRMGFAV---GNE 254 (405)
T ss_pred HHHHHHHHHHHcCeEEEEeccchhhhcCCC-CCCChhhCC-C---c--cCcEEEEecccccc-CCcchheeeee---CCH
Confidence 999999999999999999999999988542 344444431 1 0 12478899999999 79999999998 899
Q ss_pred HHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+.+.+. ...+++.+ .|.++..++.. ..+++
T Consensus 255 ~~i~~l~~~~~~~~~~~~~~----------------------------------~q~~~~~~L~~----------~~~~~ 290 (405)
T PRK09148 255 RLIAALTRVKSYLDYGAFTP----------------------------------IQVAATAALNG----------PQDCI 290 (405)
T ss_pred HHHHHHHHHHHHhccCCChH----------------------------------HHHHHHHHHhC----------cHHHH
Confidence 99999988776 23455666 45554444431 12347
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+++++.++++++.+.+.|++. ++.+..|++|+|+|++++-.. ....+.+++..++++.||.++||..|+.
T Consensus 291 ~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~l~~~~---------~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 360 (405)
T PRK09148 291 AEMRELYKKRRDVLVESFGRA-GWDIPPPAASMFAWAPIPEAF---------RHLGSLEFSKLLVEKADVAVAPGVGFGE 360 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCccCCCCeeEEEEEECCCcc---------CCCCHHHHHHHHHHhCCEEEeCchhhCC
Confidence 888999999999999999987 787778999999998764110 0112456667778889999999998865
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+.+ |+||+++.+++.+.+++++|
T Consensus 361 ------------------------------------------------~~~~--------~~Ri~~~~~~~~l~~al~~l 384 (405)
T PRK09148 361 ------------------------------------------------HGDG--------YVRIALVENEQRIRQAARNI 384 (405)
T ss_pred ------------------------------------------------CCCC--------eEEEEecCCHHHHHHHHHHH
Confidence 3333 99999999999999999999
Q ss_pred HHHHHHHHh
Q psy13922 498 REFHEEFLA 506 (509)
Q Consensus 498 ~~~~~~~~~ 506 (509)
.++++++-.
T Consensus 385 ~~~l~~~~~ 393 (405)
T PRK09148 385 KRFLSSADE 393 (405)
T ss_pred HHHHHHHHH
Confidence 999976543
No 37
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.5e-44 Score=381.57 Aligned_cols=348 Identities=22% Similarity=0.336 Sum_probs=274.9
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCC--CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQP--ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA 122 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~--~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~ 122 (509)
....|++..|.++||+++|+++++++|.. +++++|++|+|+++++..++.+++++|| .|+++.|+|..|...+.
T Consensus 78 ~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd----~Vlv~~P~Y~~~~~~~~ 153 (468)
T PLN02450 78 ELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGD----AFLLPTPYYPGFDRDLK 153 (468)
T ss_pred hhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCC----EEEECCCCCCchHHHHh
Confidence 44559999999999999999999877744 7899999999999999999999999999 99999999999988888
Q ss_pred -hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc-cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 123 -EFNMEQIGYYLDESKQWGLPISELERSITEARK-HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 123 -~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~-~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
..|++++.++++++.+|.+|++.+++.+++..+ ..++++|+++|||||||.++|.+++++|+++|+++|++||+||+|
T Consensus 154 ~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y 233 (468)
T PLN02450 154 WRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIY 233 (468)
T ss_pred hcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccc
Confidence 589999999987666789999999998876322 137899999999999999999999999999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHh--CCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEM--GEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLA 278 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~ 278 (509)
.++.+++. .+.++.++..+. .......++++++||||.| |++|+|+||++. .++.+++.+.+... +..++.+
T Consensus 234 ~~~~f~~~-~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~-~l~GlRiG~li~--~~~~l~~~~~~~~~-~~~~s~~- 307 (468)
T PLN02450 234 SGTVFDSP-GFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDL-GLPGFRVGAIYS--NDEMVVSAATKMSS-FGLVSSQ- 307 (468)
T ss_pred cccccCCC-CcccHHHHhhhcccccCCCCCcEEEEEeccccC-CCCCccEEEEEE--CCHHHHHHHHHHhh-cCCCCHH-
Confidence 99888642 455655543211 0001134699999999999 799999999982 34556776665532 3345666
Q ss_pred hhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy13922 279 LVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSI 358 (509)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 358 (509)
.|.++..+++ ++.|.. .++++.++.++++++.+.+.|+++
T Consensus 308 ---------------------------------~Q~a~~~~L~-----~~~~~~--~~l~~~~~~l~~rr~~l~~~L~~~ 347 (468)
T PLN02450 308 ---------------------------------TQYLLSALLS-----DKKFTK--NYLEENQKRLKQRQKKLVSGLEAA 347 (468)
T ss_pred ---------------------------------HHHHHHHHhC-----CchhHH--HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5666666665 222322 136778899999999999999998
Q ss_pred CCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHH
Q psy13922 359 EGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAI 438 (509)
Q Consensus 359 ~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~ 438 (509)
|+.+.++++|+|+|++++ ... .......+.+++..+++++||.+.||..|+.
T Consensus 348 -gi~~~~~~~g~flwi~l~--~~~----~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~--------------------- 399 (468)
T PLN02450 348 -GIKCLKSNAGLFCWVDMR--HLL----KSNTFEAEMELWKKIVYEVKLNISPGSSCHC--------------------- 399 (468)
T ss_pred -CCcccCCCceEEEEEEch--Hhc----CcCCchHHHHHHHHHHHhCCEEEeCccccCC---------------------
Confidence 888889999999998774 100 0001112344567788889999999998876
Q ss_pred HHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHHHH
Q psy13922 439 AKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~~ 505 (509)
.+.+ ||||+|+ .++++|++++++|++++++..
T Consensus 400 ---------------------------~~~g--------~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 400 ---------------------------TEPG--------WFRVCFANMSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred ---------------------------CCCC--------EEEEEecCCCHHHHHHHHHHHHHHHHhcc
Confidence 3333 9999999 589999999999999987644
No 38
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.4e-44 Score=376.63 Aligned_cols=345 Identities=23% Similarity=0.394 Sum_probs=280.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
|+.+.+++.+.+.+ .....|++..|.+++|+++++++.+. +..+++++|++|+|+++++.+++.+++++|| +
T Consensus 50 ~~~~~~~~~~~~~~---~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd----~ 121 (401)
T TIGR01264 50 DPEVMQAMKDSLDS---GKYNGYAPTVGALSAREAIASYYHNP-DGPIEADDVVLCSGCSHAIEMCIAALANAGQ----N 121 (401)
T ss_pred CHHHHHHHHHHHhc---cCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCCHHHEEECcChHHHHHHHHHHhCCCCC----E
Confidence 56788888888776 34556999999999999999999864 6678899999999999999999999999988 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+++.|+|..+...++..|++++.++++.+.+|++|++.+++.+.+ +++++++++||||||.+++.+++++|+++
T Consensus 122 v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~v~~~~p~NPtG~~~~~~~~~~l~~~ 196 (401)
T TIGR01264 122 ILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE-----KTAALIVNNPSNPCGSVFSRQHLEEILAV 196 (401)
T ss_pred EEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc-----CceEEEEcCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999987666789999999998876 68999999999999999999999999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH-----HHH
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP-----GVK 261 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~-----~~~ 261 (509)
|+++|++||+||+|.+|.+++. .+.++.++.+ ..++|+++||||.| |++|+|+||++. .++ +++
T Consensus 197 a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~-------~~~vi~~~SfSK~~-~~~GlRiG~iv~--~~~~~~~~~~~ 265 (401)
T TIGR01264 197 AERQCLPIIADEIYGDMVFSGA-TFEPLASLSS-------TVPILSCGGLAKRW-LVPGWRLGWIII--HDRRGILRDIR 265 (401)
T ss_pred HHHCCCEEEEEhhhhhhccCCc-ccccHHHcCC-------CCcEEEEccCcccC-CCccceEEEEEe--cCcchhHHHHH
Confidence 9999999999999999988642 3455555432 22489999999999 799999999983 221 455
Q ss_pred HHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHH
Q psy13922 262 AMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVL 341 (509)
Q Consensus 262 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (509)
+.+.+......+++.+ .|.++..++. +...+++++.+
T Consensus 266 ~~~~~~~~~~~~~~~~----------------------------------~q~a~~~~l~---------~~~~~~l~~~~ 302 (401)
T TIGR01264 266 DGLVKLSQRILGPCTI----------------------------------VQGALPSILL---------RTPQEYFDGTL 302 (401)
T ss_pred HHHHHHhhccCCCCcH----------------------------------HHHHHHHHHH---------hCcHHHHHHHH
Confidence 5555544334456666 5555555543 11124578889
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCc
Q psy13922 342 DSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGT 421 (509)
Q Consensus 342 ~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~ 421 (509)
+.++++++.+.+.|++++++.+..|++|+|+|++++... ..+..++.+++..+++++||.++||..|+.
T Consensus 303 ~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~-------~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~---- 371 (401)
T TIGR01264 303 SVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEH-------FPEFKNDVEFTERLVAEQSVFCLPGSCFEY---- 371 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccc-------cCCCCCHHHHHHHHHHhCCEEEeCchhcCC----
Confidence 999999999999999987888788999999998875210 001123566677778889999999998865
Q ss_pred cccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHH
Q psy13922 422 YHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFH 501 (509)
Q Consensus 422 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~ 501 (509)
++ ++|++++.+++.+++++++|.+++
T Consensus 372 --------------------------------------------~~----------~iRis~~~~~~~l~~~l~rl~~~~ 397 (401)
T TIGR01264 372 --------------------------------------------PG----------FFRVVLTVPVVMMEEACSRIQEFC 397 (401)
T ss_pred --------------------------------------------CC----------eEEEEEcCCHHHHHHHHHHHHHHH
Confidence 44 999999988999999999999998
Q ss_pred HH
Q psy13922 502 EE 503 (509)
Q Consensus 502 ~~ 503 (509)
++
T Consensus 398 ~~ 399 (401)
T TIGR01264 398 ER 399 (401)
T ss_pred hc
Confidence 65
No 39
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.4e-44 Score=374.32 Aligned_cols=343 Identities=16% Similarity=0.275 Sum_probs=278.8
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-CcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~ 98 (509)
|.|.+ |+.+.+++.+.+.+ . ..+|+++.|.+++|+++++++.+.+|++.++ ++|++|+|+++++..+++.+++
T Consensus 37 g~p~~~~~~~~~~~~~~~~~~---~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~ 112 (384)
T PRK12414 37 GAPNFAPDPALVEGVARAMRD---G-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVH 112 (384)
T ss_pred CCCCCCCCHHHHHHHHHHHHh---C-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcC
Confidence 55666 66788888887765 2 3459999999999999999999988987765 6899999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| +|+++.|+|..+...++..|.+++.++.+++ +|.+|++.|++.++. ++++|++++||||||.++|++
T Consensus 113 ~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~-----~~~~v~i~~p~NPTG~~~s~~ 182 (384)
T PRK12414 113 PGD----EVIYFEPSFDSYAPIVRLQGATPVAIKLSPE-DFRVNWDEVAAAITP-----RTRMIIVNTPHNPSATVFSAA 182 (384)
T ss_pred CCC----EEEEeCCCccchHHHHHHcCCEEEEEecCcc-ccccCHHHHHhhcCc-----ccEEEEEcCCCCCCCcCCCHH
Confidence 998 9999999999999999999999999998754 478999999998876 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|+++|+||+|.++.+++. ...++.++ ++. ..++|+++||||.| |+||+|+||++ +++
T Consensus 183 ~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~-~~~-----~~~~i~~~SfSK~~-~~pGlRiG~~v---~~~ 251 (384)
T PRK12414 183 DLARLAQLTRNTDIVILSDEVYEHVVFDGA-RHHSMARH-REL-----AERSVIVSSFGKSY-HVTGWRVGYCL---APA 251 (384)
T ss_pred HHHHHHHHHHHCCeEEEEhhhhhhccCCCC-CccCcccC-cCc-----cCcEEEEecccccc-cCccceEEEEe---cCH
Confidence 999999999999999999999999988643 22233322 111 22599999999999 79999999998 799
Q ss_pred HHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+.+... ...+.+.+ .|.++..++.. + .+ .
T Consensus 252 ~l~~~l~~~~~~~~~~~s~~----------------------------------~q~a~~~~l~~-----~---~~---~ 286 (384)
T PRK12414 252 ELMDEIRKVHQFMVFSADTP----------------------------------MQHAFAEALAE-----P---AS---Y 286 (384)
T ss_pred HHHHHHHHHHhheecCCCcH----------------------------------HHHHHHHHhcC-----C---hH---H
Confidence 99999988765 34566666 55555555541 1 11 2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
.++++.++++++.+.+.|++. |+.+.++.||||+|++++-. ....+.+++.++++++||.+.||+.|+.
T Consensus 287 ~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~----------~~~~~~~~~~~~l~~~gV~v~pg~~f~~ 355 (384)
T PRK12414 287 LGLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARFRHF----------SDESDSDFVLRLIRDARVATIPLSAFYT 355 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEccccc----------CCCCHHHHHHHHHHhCCEEEecchhhcC
Confidence 346778899999999999998 88888999999999877410 0113455677888899999999998865
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.. .+.+ ++||+++.++++++++++||
T Consensus 356 ~~----------------------------------------------~~~~--------~iRis~~~~~~~~~~~~~rl 381 (384)
T PRK12414 356 DG----------------------------------------------TDTG--------LIRLSFSKDDATLVEGARRL 381 (384)
T ss_pred CC----------------------------------------------CCCC--------EEEEEecCCHHHHHHHHHHH
Confidence 10 1123 99999999999999999999
Q ss_pred HH
Q psy13922 498 RE 499 (509)
Q Consensus 498 ~~ 499 (509)
.+
T Consensus 382 ~~ 383 (384)
T PRK12414 382 CS 383 (384)
T ss_pred hh
Confidence 75
No 40
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-44 Score=372.67 Aligned_cols=363 Identities=20% Similarity=0.291 Sum_probs=287.4
Q ss_pred HHHHHHHhhcCCCCC----CCCC--CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cE
Q psy13922 7 LSLQVLALVSLPQLF----DDPR--FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DV 79 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~----~~~~--~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i 79 (509)
.++.+....+.+..+ |.|+ .|+.+.+++.+.+.. . ..+|++..|.+++|+++++++++++|++++++ +|
T Consensus 15 ~~~~~~~~~~~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~---~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i 90 (387)
T PRK08912 15 IFEVMSQLAREHGAINLGQGFPDDPGPEDVRRAAADALLD---G-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEV 90 (387)
T ss_pred HHHHHHHHHhhCCeEEccCCCCCCCCCHHHHHHHHHHHhc---C-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccE
Confidence 444445555544433 3444 467888888777654 2 34599999999999999999998889889998 99
Q ss_pred EEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCc
Q psy13922 80 ILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNP 159 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~ 159 (509)
++|+|+++++..++..++++|| +|+++.|+|..+...++..|++++.++.+++ +|.+|++.+++.+.. ++
T Consensus 91 ~~t~G~~~al~~~~~~~~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~~-----~~ 160 (387)
T PRK08912 91 MVTSGATEALAAALLALVEPGD----EVVLFQPLYDAYLPLIRRAGGVPRLVRLEPP-HWRLPRAALAAAFSP-----RT 160 (387)
T ss_pred EEeCCcHHHHHHHHHHhcCCCC----EEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cCcCCHHHHHHHhCc-----cc
Confidence 9999999999999999999998 9999999999999999999999999998643 578999999998876 78
Q ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 160 RAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 160 ~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
+++++++||||||.++|.+++++|+++|+++|++||+||+|.++.+++. .+.++.++. +. ..++|+++||||.
T Consensus 161 ~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~-~~-----~~~~i~~~S~SK~ 233 (387)
T PRK08912 161 KAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR-RHIPLMTLP-GM-----RERTVKIGSAGKI 233 (387)
T ss_pred eEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC-CCcChhhCC-Cc-----cCceEEEeechhh
Confidence 9999999999999999999999999999999999999999999988642 344444321 11 1358999999999
Q ss_pred cCCCCCCeeEEEeeecCCHHHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhc
Q psy13922 240 YMGECGLRGGYSEVINLDPGVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDC 318 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 318 (509)
| |++|+|+||++ +++++++.+.+.... ..+.+.. .|.++..
T Consensus 234 ~-g~~GlRiG~~~---~~~~~~~~l~~~~~~~~~~~~~~----------------------------------~q~~~~~ 275 (387)
T PRK08912 234 F-SLTGWKVGFVC---AAPPLLRVLAKAHQFLTFTTPPN----------------------------------LQAAVAY 275 (387)
T ss_pred c-cCcCceeEEEe---cCHHHHHHHHHHHhhccccCChH----------------------------------HHHHHHH
Confidence 9 89999999998 799999998876552 2333433 2333333
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCC-CCcHHH
Q psy13922 319 VVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGK-CPSVLY 397 (509)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~-~~~~~~ 397 (509)
.+. ...++.+++++.++++++.+.+.|+.. |+.+.+++|++|+|+++.. .+. .++.++
T Consensus 276 ~l~----------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l~~----------~~~~~~~~~~ 334 (387)
T PRK08912 276 GLG----------KPDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDLAP----------LGLAEDDVAF 334 (387)
T ss_pred HHh----------CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecccc----------cCCCCCHHHH
Confidence 221 012236788899999999999999998 8888899999999987751 011 245566
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
+..+++++||.+.||..|+... ++.+
T Consensus 335 ~~~l~~~~gV~v~pg~~f~~~~----------------------------------------------~~~~-------- 360 (387)
T PRK08912 335 CRRLVEEAGVAAIPVSAFYEED----------------------------------------------PVTS-------- 360 (387)
T ss_pred HHHHHhcCCEEEecchhhCCCC----------------------------------------------CCCC--------
Confidence 7777888999999999886510 2222
Q ss_pred eEEEEeecChHHHHHHHHHHHHHHHH
Q psy13922 478 HFRTTILPQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 478 ~~Rls~~~~~~~i~~~~~~l~~~~~~ 503 (509)
++||+|+.+++.|++++++|++++++
T Consensus 361 ~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 361 VVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred EEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 99999998899999999999998753
No 41
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=4.8e-44 Score=370.63 Aligned_cols=361 Identities=25% Similarity=0.409 Sum_probs=292.4
Q ss_pred hHHHHHHHHhhc-CCCCC----CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC
Q psy13922 5 FSLSLQVLALVS-LPQLF----DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ 77 (509)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~----~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~ 77 (509)
.+.+++++..+. .+..+ +.|.+ |+.+.+++.+.+.. . ...|++..|.+++|++++++++.++|+.++++
T Consensus 14 ~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~---~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~ 89 (387)
T PRK07683 14 ISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITE---N-YTSYTHNAGLLELRKAACNFVKDKYDLHYSPE 89 (387)
T ss_pred ccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhc---C-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Confidence 345566666654 23433 56665 46788888888875 2 34599999999999999999998889888998
Q ss_pred -cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 78 -DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 78 -~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
+|++|+|+++++..+++.++++|| .|+++.|+|..+...++..|++++.++.+++ +|.+|.+.+++.+..
T Consensus 90 ~~I~~t~G~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~~---- 160 (387)
T PRK07683 90 SEIIVTIGASEAIDIAFRTILEPGT----EVILPAPIYPGYEPIIRLCGAKPVFIDTRST-GFRLTAEALENAITE---- 160 (387)
T ss_pred CcEEEeCChHHHHHHHHHHhCCCCC----EEEEcCCCccchHHHHHHcCCEEEEeecCcc-cCCCCHHHHHHhcCc----
Confidence 999999999999999999999988 9999999999999999999999999998754 578899999998876
Q ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec
Q psy13922 157 CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC 236 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 236 (509)
++++|++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ...++.++. +. ..++|+++||
T Consensus 161 -~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~-----~~~vi~~~s~ 231 (387)
T PRK07683 161 -KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ--PHTSIAHFP-EM-----REKTIVINGL 231 (387)
T ss_pred -CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCC--CcCChhhcc-CC-----cCCeEEEeec
Confidence 78999999999999999999999999999999999999999999998754 233444431 11 2359999999
Q ss_pred ccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccch
Q psy13922 237 SKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTV 315 (509)
Q Consensus 237 SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 315 (509)
||.| |+||+|+||++ +++++++++.+... ...+++.+ .|.+
T Consensus 232 SK~~-~~pGlRiG~i~---~~~~l~~~~~~~~~~~~~~~~~~----------------------------------~q~~ 273 (387)
T PRK07683 232 SKSH-SMTGWRIGFLF---APSYLAKHILKVHQYNVTCASSI----------------------------------SQYA 273 (387)
T ss_pred cccc-cCccceeEEEE---cCHHHHHHHHHHHHhccCCCChH----------------------------------HHHH
Confidence 9999 79999999998 79999999887654 23445555 5555
Q ss_pred hhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcH
Q psy13922 316 MDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSV 395 (509)
Q Consensus 316 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 395 (509)
+..++.. ...++++.++.++++++.+.+.|.+. ++.+.++++++|+|+.+.. .+ .++.
T Consensus 274 ~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~----------~~-~~~~ 331 (387)
T PRK07683 274 ALEALTA----------GKDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKPTGAFYLFPSIGH----------FT-MSSF 331 (387)
T ss_pred HHHHHhC----------ChHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCeeEEEEEeccc----------CC-CCHH
Confidence 5555431 11236778889999999999999987 8888899999999976651 01 1345
Q ss_pred HHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCC
Q psy13922 396 LYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPG 475 (509)
Q Consensus 396 ~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (509)
.++..+++++||.++||..|+. .+.+
T Consensus 332 ~~~~~ll~~~gI~v~pg~~f~~------------------------------------------------~~~~------ 357 (387)
T PRK07683 332 DFALDLVEEAGLAVVPGSAFSE------------------------------------------------YGEG------ 357 (387)
T ss_pred HHHHHHHHhCCEEEcCchhhCC------------------------------------------------CCCC------
Confidence 5667888999999999998875 3333
Q ss_pred ceeEEEEeecChHHHHHHHHHHHHHHHH
Q psy13922 476 TYHFRTTILPQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 476 ~~~~Rls~~~~~~~i~~~~~~l~~~~~~ 503 (509)
+|||+++.+++++++++++|.+++++
T Consensus 358 --~~Ri~~~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 358 --YVRLSYAYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred --eEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998863
No 42
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=3.7e-44 Score=366.72 Aligned_cols=333 Identities=22% Similarity=0.363 Sum_probs=271.0
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
|+.+.+++.+.... ..+|+++.|.++||+++++++.+++|++++++ +|++|+|+++++..++..++++|| +++
T Consensus 15 ~~~~~~~~~~~~~~-----~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~-~~d 88 (350)
T TIGR03537 15 PPFIRKALIDAVPE-----VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEE-DRR 88 (350)
T ss_pred CHHHHHHHHHHHhc-----cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCC-CCc
Confidence 56788888776432 45699999999999999999999999999998 999999999999999999998873 334
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.|+++.|+|..+...++..|++++.++.+++++|.+|++.+++++.+ +++++++++||||||.+++.+++++|++
T Consensus 89 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----~~~~i~i~~p~NPtG~~~~~~~~~~l~~ 163 (350)
T TIGR03537 89 RVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE-----ETKIVWINYPHNPTGATAPRSYLKETIA 163 (350)
T ss_pred eEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh-----ccEEEEEeCCCCCcCcccCHHHHHHHHH
Confidence 99999999999999999999999999997666788999999999877 7999999999999999999999999999
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
+|+++|++||+||+|.++.++. ...++.... ..++|+++|+||.+ |++|+|+||++ +++.+++.+.
T Consensus 164 ~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~--------~~~~i~~~s~SK~~-g~~GlRiG~~~---~~~~~~~~~~ 229 (350)
T TIGR03537 164 MCREHGIILCSDECYTEIYFGE--PPHSALEVG--------IENVLAFHSLSKRS-GMTGYRSGFVA---GDEKLISFLR 229 (350)
T ss_pred HHHHcCcEEEEeccccccccCC--CCCchhhcC--------cCCEEEEeeccccc-CCccccceeee---cCHHHHHHHH
Confidence 9999999999999999987643 233333321 23599999999999 89999999998 8999999998
Q ss_pred Hhhhcc-cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHH
Q psy13922 266 KSISAM-LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSL 344 (509)
Q Consensus 266 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (509)
.....+ .+++.+ .|.++..++. .+ +++++.++.+
T Consensus 230 ~~~~~~~~~~~~~----------------------------------~q~~~~~~l~--------~~---~~~~~~r~~l 264 (350)
T TIGR03537 230 KLRANFGVASPDF----------------------------------VQAAAKAAWS--------DD---NHVLERRKIF 264 (350)
T ss_pred HHHHhhccCCCHH----------------------------------HHHHHHHHhC--------Cc---HHHHHHHHHH
Confidence 876532 233333 3333333322 02 2366778899
Q ss_pred HHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCcccc
Q psy13922 345 KQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHF 424 (509)
Q Consensus 345 ~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~ 424 (509)
+++++.+.+.|++. |+++.+|++++|+|++++. + .++..++..++ ++||.++||..|+.
T Consensus 265 ~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~~~-----------~-~~~~~l~~~L~-~~gv~v~~g~~f~~------- 323 (350)
T TIGR03537 265 KRKRDLFIEFFNKV-GLEYLYPDATFYLWVKVPS-----------G-IDAKDYALRLL-ENGIVVAPGENFGS------- 323 (350)
T ss_pred HHHHHHHHHHHHHC-CCcccCCCeEEEEEEECCC-----------C-CCHHHHHHHHH-HCCEEEcCchhhCC-------
Confidence 99999999999988 8888899999999987751 1 13455555554 57999999998865
Q ss_pred ccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHH
Q psy13922 425 RQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFRE 499 (509)
Q Consensus 425 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~ 499 (509)
.+.+ +||++++.+++++++++++|++
T Consensus 324 -----------------------------------------~~~~--------~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 324 -----------------------------------------GEEG--------YVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred -----------------------------------------CCCC--------EEEEEecCCHHHHHHHHHHHhc
Confidence 2223 8999999889999999999875
No 43
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.8e-44 Score=369.76 Aligned_cols=349 Identities=19% Similarity=0.304 Sum_probs=283.1
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCC-CCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPAD-WQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
|.|++ |+.+.+++.+.+.. .....|++..|.+++|+++++++.+++|.+++ +++|++|+|+++++..++..+++
T Consensus 35 g~~~~~~~~~~~~a~~~~~~~---~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~ 111 (389)
T PRK05957 35 GVVSYPPPPEAIEALNNFLAN---PENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITD 111 (389)
T ss_pred CCCCCCCCHHHHHHHHHHHhC---CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcC
Confidence 45544 67888999888765 23356999999999999999999988898777 77999999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| .|+++.|+|..+...++..|++++.++.+. +|.+|++.+++.++. ++++|++++||||||.++|.+
T Consensus 112 ~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~-----~~klv~~~~p~NPtG~~~~~~ 180 (389)
T PRK05957 112 PGD----EIILNTPYYFNHEMAITMAGCQPILVPTDD--NYQLQPEAIEQAITP-----KTRAIVTISPNNPTGVVYPEA 180 (389)
T ss_pred CCC----EEEEeCCCCcCHHHHHHhcCCEEEEeecCC--CCCcCHHHHHHhcCc-----CceEEEEeCCCCCCCcCcCHH
Confidence 988 999999999999888899999999998763 468999999999876 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|++||+||+|.++.+++. ...+...+. + ...++|+++||||.| |++|+|+||++ .++
T Consensus 181 ~~~~i~~~a~~~~~~li~De~y~~~~~~~~-~~~~~~~~~-~-----~~~~~i~~~S~SK~~-g~~GlRiG~~~---~~~ 249 (389)
T PRK05957 181 LLRAVNQICAEHGIYHISDEAYEYFTYDGV-KHFSPGSIP-G-----SGNHTISLYSLSKAY-GFASWRIGYMV---IPI 249 (389)
T ss_pred HHHHHHHHHHHcCcEEEEeccchhccCCCC-CccChhhCC-C-----ccCcEEEEecchhhc-cCccceeEEEe---cCH
Confidence 999999999999999999999999988632 223333321 1 134599999999999 79999999998 789
Q ss_pred HHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++++...... ..+++.+ .|.++..++.. ...++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~~----------~~~~~ 285 (389)
T PRK05957 250 HLLEAIKKIQDTILICPPVV----------------------------------SQYAALGALQV----------GKSYC 285 (389)
T ss_pred HHHHHHHHHHhhcccCCCcH----------------------------------HHHHHHHHHhC----------ChHHH
Confidence 999999887653 3345555 45444433331 01225
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCC-eeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGM-SCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
++.++.++++++.+.+.|++++++ .+.+++|++|+|+++.. ++ ++.+++.++++++||.++||+.|+
T Consensus 286 ~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~-----------~~-~~~~~~~~l~~~~gv~v~pg~~f~ 353 (389)
T PRK05957 286 QQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNT-----------DL-NDFELVKQLIREYRVAVIPGTTFG 353 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCC-----------CC-ChHHHHHHHHHHCCEEEccchhhC
Confidence 556677899999999999988664 67789999999987751 22 356667788888999999999886
Q ss_pred CCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHH
Q psy13922 417 QVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLE 495 (509)
Q Consensus 417 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~ 495 (509)
. .+.+ ++||+++ .++++++++++
T Consensus 354 ~------------------------------------------------~~~~--------~iRis~~~~~~~~l~~~~~ 377 (389)
T PRK05957 354 M------------------------------------------------KNGC--------YLRIAYGALQKATAKEGIE 377 (389)
T ss_pred C------------------------------------------------CCCC--------EEEEEEecCCHHHHHHHHH
Confidence 6 3333 9999998 68999999999
Q ss_pred HHHHHHHHHHhh
Q psy13922 496 KFREFHEEFLAK 507 (509)
Q Consensus 496 ~l~~~~~~~~~~ 507 (509)
+|.++++.+.++
T Consensus 378 ~l~~~~~~~~~~ 389 (389)
T PRK05957 378 RLVQGLKTIVQQ 389 (389)
T ss_pred HHHHHHHhhhcC
Confidence 999999887653
No 44
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.5e-43 Score=367.52 Aligned_cols=362 Identities=23% Similarity=0.392 Sum_probs=289.2
Q ss_pred HHHHHHHhh-cCCCCC----CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-Cc
Q psy13922 7 LSLQVLALV-SLPQLF----DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QD 78 (509)
Q Consensus 7 ~~~~~~~~~-~~~~~~----~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~ 78 (509)
.+++++.+. +.++.+ |.|++ |+.+.+++.+.+.. . ...|++..|.+++|++++++++.++|+.+++ ++
T Consensus 18 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~---~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 93 (391)
T PRK07309 18 LIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDA---N-QSHYTGMAGLLELRQAAADFVKEKYNLDYAPENE 93 (391)
T ss_pred HHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhc---C-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 456666543 334544 44554 66788888877765 2 3459999999999999999999888987775 68
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCC
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCN 158 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~ 158 (509)
|++|+|+++++.+++..++++|| +|+++.|+|.++...++..|.+++.++.++ .+|.+|++.+++.+++.. .+
T Consensus 94 i~it~G~~~al~~~~~~~~~~gd----~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~--~~ 166 (391)
T PRK07309 94 ILVTIGATEALSASLTAILEPGD----KVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEMLEKAILEQG--DK 166 (391)
T ss_pred EEEeCChHHHHHHHHHHhcCCCC----EEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHHHHHhhccC--CC
Confidence 99999999999999999999988 999999999999999999999999999764 357899999999987521 15
Q ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 159 PRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
+++|++++||||||.+++.+++++|+++|++||+++|+|++|.++.+++. .+.++.++.. .++|+++||||
T Consensus 167 ~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~-~~~~~~~~~~--------~~~i~~~S~SK 237 (391)
T PRK07309 167 LKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE-PHVSIAEYLP--------DQTILINGLSK 237 (391)
T ss_pred eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC-CCCCHHHhcc--------CCEEEEecChh
Confidence 89999999999999999999999999999999999999999999998542 3445554422 24999999999
Q ss_pred ccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhh
Q psy13922 239 GYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMD 317 (509)
Q Consensus 239 ~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 317 (509)
.| |++|+|+||++ +++++++.+..... ...+++.+ .|.++.
T Consensus 238 ~~-g~~GlRvG~~v---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~ 279 (391)
T PRK07309 238 SH-AMTGWRIGLIF---APAEFTAQLIKSHQYLVTAATTM----------------------------------AQFAAV 279 (391)
T ss_pred hc-cCccceeEEEE---eCHHHHHHHHHHHhhcccCCChH----------------------------------HHHHHH
Confidence 99 79999999998 79999999987654 33456666 455555
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCC-CcHH
Q psy13922 318 CVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKC-PSVL 396 (509)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~-~~~~ 396 (509)
.++.. +.+ +....++.++++++.+.+.|++. ++.+.+|++++|+|++++ . +.. ++.+
T Consensus 280 ~~l~~-----~~~-----~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l~--~---------~~~~~~~~ 337 (391)
T PRK07309 280 EALTN-----GKD-----DALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKIP--A---------GYNQDSFK 337 (391)
T ss_pred HHHhC-----Chh-----HHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEECC--C---------CCCCCHHH
Confidence 55441 111 13456778888999999999988 888889999999997664 1 221 3455
Q ss_pred HHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCc
Q psy13922 397 YAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGT 476 (509)
Q Consensus 397 ~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (509)
++.++++++||.+.||..|+. .+.+
T Consensus 338 ~~~~l~~~~gv~v~pg~~f~~------------------------------------------------~~~~------- 362 (391)
T PRK07309 338 FLQDFARKKAVAFIPGAAFGP------------------------------------------------YGEG------- 362 (391)
T ss_pred HHHHHHHhCCEEEeCchhhCC------------------------------------------------CCCC-------
Confidence 566788889999999998876 3334
Q ss_pred eeEEEEeecChHHHHHHHHHHHHHHHHH
Q psy13922 477 YHFRTTILPQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 477 ~~~Rls~~~~~~~i~~~~~~l~~~~~~~ 504 (509)
+||++++.+++++++++++|+++++++
T Consensus 363 -~iRi~~~~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 363 -YVRLSYAASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred -EEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 999999988999999999999998654
No 45
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=4.1e-44 Score=371.47 Aligned_cols=346 Identities=21% Similarity=0.350 Sum_probs=282.2
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ |+.+.+++.+.+.. . ...|++..|.+++|++++++++.++|+.+++++|++|+|+++++..++..++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~---~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~ 113 (388)
T PRK07337 38 GEPDFTAPEPVVEAAARALRR---G-VTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVER 113 (388)
T ss_pred cCCCCCCCHHHHHHHHHHHhc---C-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCC
Confidence 56665 56888888887765 3 345999999999999999999998998899999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|..+...++..|++++.++.+++.+|.+|++.+++.+.+ ++++|++++||||||.+++.++
T Consensus 114 gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~ 184 (388)
T PRK07337 114 GD----EVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE-----RTRGVLLASPSNPTGTSIAPDE 184 (388)
T ss_pred CC----EEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc-----cceEEEEECCCCCCCcCcCHHH
Confidence 88 99999999999999999999999999998766789999999998876 7899999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|+++++++|+||+|.++.+.+. ..+...+ ..++|+++||||.+ |++|+|+||++ .+++
T Consensus 185 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~---------~~~vi~~~S~SK~~-~~~G~RiG~~~---~~~~ 249 (388)
T PRK07337 185 LRRIVEAVRARGGFTIVDEIYQGLSYDAA--PVSALSL---------GDDVITINSFSKYF-NMTGWRLGWLV---VPEA 249 (388)
T ss_pred HHHHHHHHHHCCCEEEEeccccccccCCC--CcChhhc---------cCCEEEEEechhhc-CCchhheeeee---cCHH
Confidence 99999999999999999999999887542 2333322 12489999999999 79999999998 7889
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+.+... ...+.+.+ .|.++..++. ++ ...+.+
T Consensus 250 l~~~l~~~~~~~~~~~s~~----------------------------------~q~~~~~~l~-----~~----~~~~~~ 286 (388)
T PRK07337 250 LVGTFEKLAQNLFICASAL----------------------------------AQHAALACFE-----PD----TLAIYE 286 (388)
T ss_pred HHHHHHHHHHHhccCCChH----------------------------------HHHHHHHHhc-----cC----chHHHH
Confidence 9999988765 33456666 4555444443 11 112356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCee-ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSC-NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+.++.++++++.+.+.|+++ ++.+ ..|++|+|+|++++... +.+..++.+++..+++++||.+.||..|+.
T Consensus 287 ~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~ 358 (388)
T PRK07337 287 RRRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVYADCRGVA-------HPAAGDSAALTQAMLHDAGVVLVPGRDFGP 358 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEEEeccccc-------CCCCCCHHHHHHHHHHhCCEEEeCchhhCC
Confidence 77889999999999999987 7664 46889999998875100 001224566677888999999999998875
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
. .+.+ ||||+++.++++|++++++|
T Consensus 359 ~-----------------------------------------------~~~~--------~~Ri~~~~~~~~l~~~l~rl 383 (388)
T PRK07337 359 H-----------------------------------------------APRD--------YIRLSYATSMSRLEEAVARL 383 (388)
T ss_pred C-----------------------------------------------CCCC--------EEEEEecCCHHHHHHHHHHH
Confidence 1 1223 99999998899999999999
Q ss_pred HHHH
Q psy13922 498 REFH 501 (509)
Q Consensus 498 ~~~~ 501 (509)
.+++
T Consensus 384 ~~~l 387 (388)
T PRK07337 384 GKLF 387 (388)
T ss_pred HHHh
Confidence 8865
No 46
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=8.6e-44 Score=370.69 Aligned_cols=346 Identities=26% Similarity=0.421 Sum_probs=281.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
|+.+++++.+.+.. .....|++..|.+++|++++++++.++++.+++++|++|+|+++++.+++.+++++|| +
T Consensus 50 ~~~~~~~~~~~l~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd----~ 122 (403)
T TIGR01265 50 DPEAEEAVKDALRS---GKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGA----N 122 (403)
T ss_pred CHHHHHHHHHHHhc---CCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCC----E
Confidence 56888888888876 3445699999999999999999998788888899999999999999999999998888 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+++.|+|..+...++..|.+++.++.+++.+|.+|++.+++.+.. +++++++++||||||.+++.+++++|+++
T Consensus 123 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~v~i~~p~NPtG~~~~~~~~~~i~~~ 197 (403)
T TIGR01265 123 ILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE-----KTVAIVVINPSNPCGSVFSRDHLQKIAEV 197 (403)
T ss_pred EEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc-----CccEEEEecCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999887666788999999998876 78999999999999999999999999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH-H-----H
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP-G-----V 260 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~-~-----~ 260 (509)
|+++|++||+|++|.++.+++. .+.++.++.. ..++|+++||||.| |+||+|+||++. .++ + +
T Consensus 198 a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~-------~~~vi~~~S~SK~~-~~pGlRiG~~v~--~~~~~~~~~~~ 266 (403)
T TIGR01265 198 ARKLGIPIIADEIYGHMVFGDA-PFIPMASFAS-------IVPVLSLGGISKRW-VVPGWRLGWIII--HDPHGIFRDTV 266 (403)
T ss_pred HHHCCCEEEEEccccccccCCC-Cccchhhhcc-------CCcEEEEeeccccc-CCCcceEEEEEE--eCchhhhHHHH
Confidence 9999999999999999988642 4455555432 23499999999999 799999999983 322 2 4
Q ss_pred HHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHH
Q psy13922 261 KAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSV 340 (509)
Q Consensus 261 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 340 (509)
++.+........+++.+ .|.++..++. +....++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~---------~~~~~~~~~~ 303 (403)
T TIGR01265 267 LQGLKNLLQRILGPATI----------------------------------VQGALPDILE---------NTPQEFFDGK 303 (403)
T ss_pred HHHHHHHhhhhcCCChH----------------------------------HHHHHHHHHH---------hChHHHHHHH
Confidence 45555544333456666 5666655543 1122347888
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCC
Q psy13922 341 LDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPG 420 (509)
Q Consensus 341 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~ 420 (509)
++.++++++.+.+.|+.++++.+..|.+|+|+|++++... . .+..++.+++..+++++||.+.||..|+.
T Consensus 304 ~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~--~-----~~~~~~~~~~~~l~~~~gv~v~pg~~f~~--- 373 (403)
T TIGR01265 304 ISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELEL--F-----PEIKDDVDFCEKLVREESVICLPGSAFGL--- 373 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccc--c-----CCCCCHHHHHHHHHHhCCEEEeCccccCC---
Confidence 8999999999999999988888778999999998775210 0 01224566677778899999999998865
Q ss_pred ccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHH
Q psy13922 421 TYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREF 500 (509)
Q Consensus 421 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~ 500 (509)
++ ++|++++.+++.|++++++|+++
T Consensus 374 ---------------------------------------------~~----------~iRis~~~~~~~l~~~l~~l~~~ 398 (403)
T TIGR01265 374 ---------------------------------------------PN----------WVRITITVPESMLEEACSRIKEF 398 (403)
T ss_pred ---------------------------------------------CC----------eEEEEecCCHHHHHHHHHHHHHH
Confidence 44 99999998899999999999998
Q ss_pred HHH
Q psy13922 501 HEE 503 (509)
Q Consensus 501 ~~~ 503 (509)
+++
T Consensus 399 ~~~ 401 (403)
T TIGR01265 399 CER 401 (403)
T ss_pred HHh
Confidence 864
No 47
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-43 Score=373.05 Aligned_cols=351 Identities=20% Similarity=0.324 Sum_probs=293.0
Q ss_pred CCCCCCHHHHHH-HHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC
Q psy13922 22 DDPRFPDDVKQR-AQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a-~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g 100 (509)
+...||....+. +.+.++.........|.++.|.++||+++++++....|+.+++++|++|+|+++|+.++++.++++|
T Consensus 100 ~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pG 179 (459)
T COG1167 100 DPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPG 179 (459)
T ss_pred CcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCC
Confidence 344578765555 4555554433435669999999999999999999788999999999999999999999999999999
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEE-eCCCCCCCCCCCHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVI-INPGNPTGQVLTKEN 179 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi-~~p~NPtG~~~s~~~ 179 (509)
| +|++++|+|.+...+++..|++++.||.+++ ++|++.|++.++.. ++|++|+ ++.|||||.+||.+.
T Consensus 180 d----~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~---G~~~e~le~~~~~~----~~k~~y~~P~~qNPtG~tms~~r 248 (459)
T COG1167 180 D----TVLVEDPTYPGALQALEALGARVIPVPVDED---GIDPEALEEALAQW----KPKAVYVTPTFQNPTGVTMSLER 248 (459)
T ss_pred C----EEEEcCCCcHHHHHHHHHcCCcEEecCCCCC---CCCHHHHHHHHhhc----CCcEEEECCCCCCCCCCccCHHH
Confidence 9 9999999999999999999999999999977 89999999999986 7999997 699999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
.++|++||++||++||+||.|++|.+++. +.+++..++. ..+||+++||||+++ ||+|+||++ ++++
T Consensus 249 R~~Ll~lA~~~~~~IIEDD~y~el~~~~~-p~~~l~~ld~-------~~rViy~gSFSK~l~--PglRlG~vv---~p~~ 315 (459)
T COG1167 249 RKALLALAEKYDVLIIEDDYYGELRYDGP-PPPPLKALDA-------PGRVIYLGSFSKTLA--PGLRLGYVV---APPE 315 (459)
T ss_pred HHHHHHHHHHcCCeEEeeCcchhhhcCCC-CCCChHhhCC-------CCCEEEEeeehhhcc--cccceeeee---CCHH
Confidence 99999999999999999999999999854 3445665543 346999999999996 999999999 8999
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+..... ...+++.+ .|.++...+. ++.|++ |++
T Consensus 316 ~~~~~~~~k~~~~~~~s~~----------------------------------~Q~~la~~l~-----~G~~~~---hl~ 353 (459)
T COG1167 316 LIEKLLRLKQAADLGPSSL----------------------------------SQAALAAFLL-----SGHYDR---HLR 353 (459)
T ss_pred HHHHHHHHHHHhcCCCChH----------------------------------HHHHHHHHHH-----cCCHHH---HHH
Confidence 9999988777 56677777 6666666655 333444 489
Q ss_pred HHHHHHHHHHHHHHHHHhcC-C-CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec-CCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSI-E-GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP-GAGF 415 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~-~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p-g~~f 415 (509)
++++.++++++.+.+.|.+. + .+.+..|.||+|+|+++.-+ + ++.. +...+.++|+.+.| |..|
T Consensus 354 ~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~-----------~-~~~~-l~~~a~~~gv~i~~~g~~f 420 (459)
T COG1167 354 RLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEG-----------I-DARE-LLAAALEKGVVVTPLGSAF 420 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCC-----------C-CHHH-HHHHHHHCCCEEEcCCccc
Confidence 99999999999999999995 4 57788999999999877622 2 2344 45666677999999 8888
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAML 494 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~ 494 (509)
.... .... +||++|+ .+.+++++++
T Consensus 421 ~~~~----------------------------------------------~~~~--------~~Rl~~s~~~~e~i~~gi 446 (459)
T COG1167 421 SADG----------------------------------------------DPRN--------GLRLSFSSPSEEEIEEGI 446 (459)
T ss_pred cCCC----------------------------------------------CCCC--------eEEEEcCCCCHHHHHHHH
Confidence 7721 1122 8999999 7899999999
Q ss_pred HHHHHHHHHHH
Q psy13922 495 EKFREFHEEFL 505 (509)
Q Consensus 495 ~~l~~~~~~~~ 505 (509)
++|.+++.+..
T Consensus 447 ~~l~~~~~~~~ 457 (459)
T COG1167 447 KRLAALLREAA 457 (459)
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 48
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=4.6e-44 Score=373.42 Aligned_cols=340 Identities=20% Similarity=0.296 Sum_probs=269.6
Q ss_pred CCCCC--CHHHHHHHHHHHhccc-CCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCR-GQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~-~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.|++ |+.+.+++.+++.... ......|+++.|.++||+++++++.+.+|+++++++|++|+|+++++.+++ .++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~-~~~~ 120 (409)
T PRK07590 42 GDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNIL-DIFG 120 (409)
T ss_pred cCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHH-HhcC
Confidence 56665 5778888888887632 123456999999999999999999888899999999999999999999875 4567
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCE-----------EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNME-----------QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINP 167 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~-----------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p 167 (509)
+|| +|+++.|+|..|...++..|.+ ++.++++++++|.+|++. + ++++|++++|
T Consensus 121 ~gd----~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~-----~~k~i~l~nP 185 (409)
T PRK07590 121 PDN----TIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------E-----KVDIIYLCFP 185 (409)
T ss_pred CCC----EEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------c-----CceEEEEeCC
Confidence 888 9999999999999999999987 899998766567666432 2 7999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe
Q psy13922 168 GNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR 247 (509)
Q Consensus 168 ~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr 247 (509)
|||||.++|.+++++|+++|+++|++||+||+|.+|.+++. ...++.++.. . ..++|+++||||.| |+||+|
T Consensus 186 ~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~-~~~~~~~~~~-~-----~~~vi~~~SfSK~~-~~pGlR 257 (409)
T PRK07590 186 NNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS-LPHSIYEIEG-A-----RECAIEFRSFSKTA-GFTGTR 257 (409)
T ss_pred CCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC-CCcchhhCCC-c-----ccceEEEecCcccc-CCcCce
Confidence 99999999999999999999999999999999999987542 2334444311 0 22489999999999 799999
Q ss_pred eEEEeeecCCHHHHHHH------------HHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccc
Q psy13922 248 GGYSEVINLDPGVKAML------------HKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQT 314 (509)
Q Consensus 248 ~G~v~~~~~~~~~~~~l------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (509)
+||++ +++++++.+ ..... .+.+++.+ .|.
T Consensus 258 iG~~i---~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------------------------------~q~ 300 (409)
T PRK07590 258 CAYTV---VPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYI----------------------------------VQR 300 (409)
T ss_pred eEEEE---cCHHHhhhccccchhhhHHHHHHHHhhcccCcCHH----------------------------------HHH
Confidence 99998 788888732 11111 23345666 555
Q ss_pred hhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCc
Q psy13922 315 VMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPS 394 (509)
Q Consensus 315 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 394 (509)
++..++.. ...++++++++.++++++.+.+.|+.. ++.+.++.+++|+|++++. + .++
T Consensus 301 a~~~~l~~---------~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~-----------~-~~~ 358 (409)
T PRK07590 301 AAEAVYSP---------EGKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPD-----------G-MSS 358 (409)
T ss_pred HHHHHhcC---------CcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCC-----------C-CCH
Confidence 55554431 112457888999999999999999998 7888888999999988751 1 134
Q ss_pred HHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCC
Q psy13922 395 VLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVP 474 (509)
Q Consensus 395 ~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (509)
.+++..+++++||.++||..|+. .+.+
T Consensus 359 ~~~~~~l~~~~gv~v~pg~~f~~------------------------------------------------~~~~----- 385 (409)
T PRK07590 359 WDFFDKLLQEANVVGTPGSGFGP------------------------------------------------SGEG----- 385 (409)
T ss_pred HHHHHHHHHHCCEEEeChhHhCC------------------------------------------------CCCC-----
Confidence 55667788889999999998865 3434
Q ss_pred CceeEEEEeecChHHHHHHHHHHHHH
Q psy13922 475 GTYHFRTTILPQPEKLKAMLEKFREF 500 (509)
Q Consensus 475 ~~~~~Rls~~~~~~~i~~~~~~l~~~ 500 (509)
++||+++.+++++++++++|+++
T Consensus 386 ---~iRi~~~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 386 ---YFRLSAFGSRENVLEAMERIKKA 408 (409)
T ss_pred ---EEEEEccCCHHHHHHHHHHHHhh
Confidence 99999888999999999999875
No 49
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-43 Score=364.55 Aligned_cols=354 Identities=18% Similarity=0.275 Sum_probs=271.3
Q ss_pred hHHHHHHHHhhcCC---CCC----CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCC
Q psy13922 5 FSLSLQVLALVSLP---QLF----DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPAD 75 (509)
Q Consensus 5 ~~~~~~~~~~~~~~---~~~----~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~ 75 (509)
..-++.++.....+ .++ |.|.+ |+.+.+++.+... ....|+++.|.++||+++++++++++|.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-----~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~ 82 (374)
T PRK05839 8 FEKLRELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAH-----LLNKYPKSAGEESLREAQRGFFKRRFKIELK 82 (374)
T ss_pred HHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhh-----ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 34456666655444 232 56665 4556666655432 2556999999999999999999999998899
Q ss_pred CCcEEEeCCHHHHHHHHHHHhh--cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLI--EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~--~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
+++|++|+|+++++..++..++ .+|| .|+++.|+|..|...++..|++++.++.+++++|.+|+...+ + +
T Consensus 83 ~~~I~it~G~~~al~~~~~~~~~~~~gd----~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~- 154 (374)
T PRK05839 83 ENELIPTFGTREVLFNFPQFVLFDKQNP----TIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-Q- 154 (374)
T ss_pred cceEEEecCcHHHHHHHHHHHhcCCCCC----EEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-c-
Confidence 9999999999999999988875 4666 999999999999999999999999999987767877765442 2 2
Q ss_pred hccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEE
Q psy13922 154 RKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASF 233 (509)
Q Consensus 154 ~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i 233 (509)
++++|+++|||||||.++|.+++++|+++|+++|++||+||+|.++.+++ .+.++.......+ .....++|++
T Consensus 155 ----~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~--~~~s~~~~~~~~~-~~~~~~vi~~ 227 (374)
T PRK05839 155 ----EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT--PPPSLLEASILVG-NESFKNVLVI 227 (374)
T ss_pred ----cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC--CCCCHhhhhcccC-ccccCcEEEE
Confidence 69999999999999999999999999999999999999999999986532 3344433211100 0112469999
Q ss_pred EecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccc
Q psy13922 234 MSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVG 312 (509)
Q Consensus 234 ~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (509)
+||||.| |+||+|+||++ +++++++++.+.... ..+.+.+ .
T Consensus 228 ~SfSK~~-~~~GlRiG~ii---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~ 269 (374)
T PRK05839 228 NSISKRS-SAPGLRSGFIA---GDASILKKYKAYRTYLGCASPLP----------------------------------L 269 (374)
T ss_pred ecccccc-CCccceeEEEe---cCHHHHHHHHHHHhhcCCCCChH----------------------------------H
Confidence 9999999 79999999998 789999999877542 3455555 4
Q ss_pred cchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCC
Q psy13922 313 QTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKC 392 (509)
Q Consensus 313 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 392 (509)
|.++..++.. .++++++++.++++++.+.+.| ++. .|.+++|+|++++
T Consensus 270 q~~~~~~l~~-----------~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~~--------------- 317 (374)
T PRK05839 270 QKAAAVAWLD-----------DEHAEFFRNIYAKNLKLAREIL----GIT--IPPATFYVWLPVD--------------- 317 (374)
T ss_pred HHHHHHHhcc-----------chHHHHHHHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeCC---------------
Confidence 5444433321 1236777888888888887765 333 6789999998764
Q ss_pred CcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCC
Q psy13922 393 PSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQ 472 (509)
Q Consensus 393 ~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (509)
++.+++.++++++||.++||..|+... .+.+
T Consensus 318 ~~~~~~~~l~~~~gi~v~pg~~f~~~~----------------------------------------------~~~~--- 348 (374)
T PRK05839 318 NDEEFTKKLYQNEGIKVLPGSFLGRNG----------------------------------------------IGKG--- 348 (374)
T ss_pred ChHHHHHHHHHHCCEEEeCchhhCCCC----------------------------------------------CCCC---
Confidence 245567777778999999998876510 1122
Q ss_pred CCCceeEEEEeecChHHHHHHHHHHHHHHH
Q psy13922 473 VPGTYHFRTTILPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 473 ~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~ 502 (509)
|+|||++.+++++++++++|+++++
T Consensus 349 -----~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 349 -----YVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred -----eEEEEecCCHHHHHHHHHHHHHHhh
Confidence 9999999889999999999999875
No 50
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.9e-43 Score=366.38 Aligned_cols=364 Identities=21% Similarity=0.307 Sum_probs=290.1
Q ss_pred HHHHHHHhhcCCCCC----CCCC--CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cE
Q psy13922 7 LSLQVLALVSLPQLF----DDPR--FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DV 79 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~----~~~~--~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i 79 (509)
.++.+++.+..+..+ |.|. .|+.+.+++.+.+.. . ..+|++..|.+++|+++++++.+.+|++.+++ +|
T Consensus 13 ~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~---~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i 88 (387)
T PRK07777 13 IFAEMSALAVRTGAVNLGQGFPDEDGPPEMLEAAQEAIAG---G-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEV 88 (387)
T ss_pred HHHHHHHHHhhCCeEEccCCCCCCCCCHHHHHHHHHHHhc---C-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcE
Confidence 567777777655544 3444 467788888777765 2 35599999999999999999998889888886 79
Q ss_pred EEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCC-CCCCCCHHHHHHHHHhhhccCC
Q psy13922 80 ILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDES-KQWGLPISELERSITEARKHCN 158 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~L~~~i~~~~~~~~ 158 (509)
++|+|+++++.+++..++++|| +|+++.|+|..+...++..|.+++.++.+++ .+|.+|++.|++.+.+ +
T Consensus 89 ~~t~G~~~al~~~~~~~~~~gd----~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~ 159 (387)
T PRK07777 89 LVTVGATEAIAAAVLGLVEPGD----EVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTP-----R 159 (387)
T ss_pred EEeCCcHHHHHHHHHHhcCCCC----EEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCc-----c
Confidence 9999999999999999998888 9999999999999999999999999998765 4688999999998876 7
Q ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 159 PRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
+++|++++||||||.+++.+++++|+++|+++++++|+||+|.++.+.+. .+.++.++. +. ..++|+++||||
T Consensus 160 ~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~-~~-----~~~~i~~~S~SK 232 (387)
T PRK07777 160 TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA-RHLPLATLP-GM-----RERTVTISSAAK 232 (387)
T ss_pred cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC-CcccHhhCC-CC-----cCcEEEEeechh
Confidence 89999999999999999999999999999999999999999999988543 334444321 11 234899999999
Q ss_pred ccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhh
Q psy13922 239 GYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMD 317 (509)
Q Consensus 239 ~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 317 (509)
.| |++|+|+||++ +++++++.+.+... .....+.+ .|.++.
T Consensus 233 ~~-g~~GlRiG~~~---~~~~l~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~ 274 (387)
T PRK07777 233 TF-NVTGWKIGWAC---GPAPLIAAVRAAKQYLTYVGGAP----------------------------------FQPAVA 274 (387)
T ss_pred hc-cCcCceeEEEe---cCHHHHHHHHHHHhhcccCCCCH----------------------------------HHHHHH
Confidence 99 79999999998 79999998887654 22334444 333333
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHH
Q psy13922 318 CVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (509)
.++.. ..++++++++.++++++.+.+.|++. ++++.++++++|+|++++. .+..++.++
T Consensus 275 ~~l~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~ 333 (387)
T PRK07777 275 HALDH----------EDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCADPRP----------LGYDDGTEF 333 (387)
T ss_pred HHHhC----------CcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEecccc----------cCCCCHHHH
Confidence 33321 12347788899999999999999998 8888899999999977641 022245677
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
+..+++++||.+.||..|+.... .+.+
T Consensus 334 ~~~l~~~~gv~v~pg~~f~~~~~---------------------------------------------~~~~-------- 360 (387)
T PRK07777 334 CRALPERVGVAAIPMSVFYDPAD---------------------------------------------AWNH-------- 360 (387)
T ss_pred HHHHHHhCCEEEeCchHhCCCCc---------------------------------------------CCCC--------
Confidence 77777889999999998865100 1122
Q ss_pred eEEEEeecChHHHHHHHHHHHHHHH
Q psy13922 478 HFRTTILPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 478 ~~Rls~~~~~~~i~~~~~~l~~~~~ 502 (509)
+|||+++.+++++++++++|+++..
T Consensus 361 ~~Ri~~~~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 361 LVRFAFCKRDDTLDEAIRRLRALRG 385 (387)
T ss_pred eEEEEecCCHHHHHHHHHHHHHHhc
Confidence 8999999999999999999998753
No 51
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.3e-44 Score=370.23 Aligned_cols=319 Identities=18% Similarity=0.234 Sum_probs=256.0
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCC-CCCC-cEEEeCCHHHHHHHHHHHhh
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQP-ADWQ-DVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~-~~~~-~i~~t~G~~~al~~~~~~l~ 97 (509)
|.|++ |+.+++++.+.+.. .....|++ .|.++||+++++++++++|+. ++++ +|++|+|+++++..++++++
T Consensus 52 g~p~~~~~~~~~~~l~~~~~~---~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~ 127 (410)
T PRK06290 52 GEPDEMADESVVEVLCEEAKK---PENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFI 127 (410)
T ss_pred CCCCCCCCHHHHHHHHHHHhC---CCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhC
Confidence 56665 56788888776654 23445875 899999999999999988987 8887 79999999999999999999
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
++|| .|+++.|+|..|...++..|++++.++++++++|.+|++.+++.+.. ++++|++++||||||.++|.
T Consensus 128 ~~gd----~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~-----~~k~i~l~nP~NPTG~v~s~ 198 (410)
T PRK06290 128 NPGD----VTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE-----KAKLLYLNYPNNPTGAVATK 198 (410)
T ss_pred CCCC----EEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc-----cceEEEEECCCCCCCcCCCH
Confidence 9998 99999999999999999999999999998877788999999988876 79999999999999999999
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++++|+++|++||++||+||+|.++.+++ .+.++.++.. . ..++|+++||||.| |+||+|+||++ ++
T Consensus 199 e~l~~l~~la~~~~~~iI~DEaY~~~~~~~--~~~s~~~~~~-~-----~~~~I~i~SfSK~~-g~~GlRiG~ii---~~ 266 (410)
T PRK06290 199 EFYEEVVDFAKENNIIVVQDAAYAALTFDG--KPLSFLSVPG-A-----KEVGVEIHSLSKAY-NMTGWRLAFVV---GN 266 (410)
T ss_pred HHHHHHHHHHHHcCeEEEEecchhhceeCC--CCcChhcCCC-c-----cccEEEEeechhhc-CCchhheEeEE---eC
Confidence 999999999999999999999999998754 2344444311 0 12479999999999 79999999998 79
Q ss_pred HHHHHHHHHhhhcc-cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 258 PGVKAMLHKSISAM-LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 258 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
+++++.+......+ .+++.+ .|.++..++.. . ++
T Consensus 267 ~~l~~~l~~~~~~~~~~~~~~----------------------------------~q~aa~~~l~~--------~---~~ 301 (410)
T PRK06290 267 ELIVKAFATVKDNNDSGQFIA----------------------------------IQKAGIYALDH--------P---EI 301 (410)
T ss_pred HHHHHHHHHHHhccccCCcHH----------------------------------HHHHHHHHhhC--------c---HH
Confidence 99999998776532 334445 44454444431 1 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
++++++.++++++.+.+.|++. |+.+.+|+|+||+|++++-.. . ...+..++.+++..++++.++.++||..|+
T Consensus 302 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~l~v~lp~~~--~---~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~ 375 (410)
T PRK06290 302 TEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFYLYVKAPKGT--K---SGIKFENAEEFSQYLIKEKLISTVPWDDAG 375 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeEEEEECCCcc--c---cCCCCCCHHHHHHHHHHhCCEEEECCcccc
Confidence 6788899999999999999998 888888999999997765110 0 000112456777888888888888876543
No 52
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.6e-43 Score=368.26 Aligned_cols=344 Identities=27% Similarity=0.446 Sum_probs=277.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
|+.+.+++.+.+.. . ...|++..|.++||++++++++..+|+.+++++|++|+|+++++..++.+++++|| .
T Consensus 48 ~~~~~~~~~~~~~~---~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd----~ 119 (398)
T PRK08363 48 PEHMKEAYCRAIKE---G-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGD----E 119 (398)
T ss_pred CHHHHHHHHHHHHc---C-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCC----E
Confidence 56888888888765 2 34599999999999999999999999999999999999999999999999999998 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+++.|+|..+...++..|.+++.++..++.+|.+|++.+++.+.. ++++|++++||||||.+++.+++++|+++
T Consensus 120 Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~l~~~ 194 (398)
T PRK08363 120 ILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE-----KTKAIAVINPNNPTGALYEKKTLKEILDI 194 (398)
T ss_pred EEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc-----ceEEEEEECCCCCCCcCcCHHHHHHHHHH
Confidence 9999999999999999999999988433334678999999988876 68999999999999999999999999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
|+++|+++|+||+|.++.+.+ .+.++.++.. ..++++++||||.| |+||+|+||+++ .+++++++.+..
T Consensus 195 a~~~~~~li~Deay~~~~~~~--~~~~~~~~~~-------~~~vi~~~SfSK~~-~~~GlRiG~~~~-~~~~~~~~~l~~ 263 (398)
T PRK08363 195 AGEHDLPVISDEIYDLMTYEG--KHVSPGSLTK-------DVPVIVMNGLSKVY-FATGWRLGYIYF-VDPEGKLAEVRE 263 (398)
T ss_pred HHHcCeEEEEhhhhhhhccCC--cccCHHHcCc-------CCcEEEEecchhcc-CCccceEEEEEE-eCcHHHHHHHHH
Confidence 999999999999999988754 3344444321 23599999999999 799999999971 126667766654
Q ss_pred hhh----cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHH
Q psy13922 267 SIS----AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLD 342 (509)
Q Consensus 267 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (509)
... ...+++.+ .|.++..++.. ..+++++.++
T Consensus 264 ~~~~~~~~~~~~s~~----------------------------------~q~~~~~~l~~----------~~~~l~~~~~ 299 (398)
T PRK08363 264 AIDKLARIRLCPNTP----------------------------------AQFAAIAGLTG----------PMDYLEEYMK 299 (398)
T ss_pred HHHHHhcccccCChH----------------------------------HHHHHHHHHhC----------ChHHHHHHHH
Confidence 432 12345555 45544444331 1234777889
Q ss_pred HHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCcc
Q psy13922 343 SLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTY 422 (509)
Q Consensus 343 ~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~ 422 (509)
.++++++.+.+.|++++++.+..|+|++|+|++++. ....++.+++.++++++||.++||..|+.
T Consensus 300 ~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~----------~~~~~~~~~~~~~l~~~gV~v~~g~~f~~----- 364 (398)
T PRK08363 300 KLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEE----------GPWKDDKEFVLDVLHEAHVLFVHGSGFGE----- 364 (398)
T ss_pred HHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEecc----------CCCCCHHHHHHHHHHhCCEEEeCchhhCC-----
Confidence 999999999999999888888889999999976651 00113455567888999999999998865
Q ss_pred ccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHH
Q psy13922 423 HFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 423 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~ 502 (509)
.+.+ |+|++++.+++++++++++|+++++
T Consensus 365 -------------------------------------------~~~~--------~iRis~~~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 365 -------------------------------------------YGAG--------HFRLVFLPPVEILEEAMDRFEEFMR 393 (398)
T ss_pred -------------------------------------------CCCC--------eEEEEecCCHHHHHHHHHHHHHHHH
Confidence 3333 9999999889999999999999887
Q ss_pred HH
Q psy13922 503 EF 504 (509)
Q Consensus 503 ~~ 504 (509)
++
T Consensus 394 ~~ 395 (398)
T PRK08363 394 ER 395 (398)
T ss_pred Hh
Confidence 64
No 53
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2.4e-43 Score=367.55 Aligned_cols=349 Identities=28% Similarity=0.479 Sum_probs=272.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
|+.+.+++.+.+.. ...|+++.|.++||+++++++..+...++++++|++|+|+++++..++++++++|| +
T Consensus 51 ~~~i~~~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd----~ 121 (404)
T PRK09265 51 PDEILRDVIRNLPT-----AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGD----E 121 (404)
T ss_pred CHHHHHHHHHHhhc-----CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCC----E
Confidence 55777777766543 34599999999999999999986655578999999999999999999999999998 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+++.|+|..+...++..|.+++.++.+.+.+|.+|++.+++.+.. ++++|++++||||||.+++.+++++|+++
T Consensus 122 Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~-----~~~~v~l~~P~NPtG~~~~~~~~~~i~~~ 196 (404)
T PRK09265 122 VLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP-----RTKAIVIINPNNPTGAVYSKELLEEIVEI 196 (404)
T ss_pred EEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc-----cceEEEEECCCCCCCcCCCHHHHHHHHHH
Confidence 9999999999999999999999999887666688999999998876 79999999999999999999999999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH----HHH
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG----VKA 262 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~----~~~ 262 (509)
|+++|++||+||+|.++.+++. .+.++.++.. +.++|+++||||.| |+||+|+||++. ..++. +++
T Consensus 197 a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~-------~~~vi~~~S~SK~~-~~pGlRiG~~v~-~~~~~~~~~~~~ 266 (404)
T PRK09265 197 ARQHNLIIFADEIYDKILYDGA-VHISIASLAP-------DLLCVTFNGLSKAY-RVAGFRVGWMVL-SGPKKHAKGYIE 266 (404)
T ss_pred HHHCCCEEEEehhhhhccCCCC-CcCCHHHcCC-------CceEEEEecchhhc-cCcccceEEEEE-eCchHHHHHHHH
Confidence 9999999999999999988642 3455555422 23589999999999 799999999972 22444 344
Q ss_pred HHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHH
Q psy13922 263 MLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLD 342 (509)
Q Consensus 263 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (509)
.+........+++.+ .|.++..++.. ++.+ ++..+.++
T Consensus 267 ~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~~-------~~~~-~~~~~~~~ 304 (404)
T PRK09265 267 GLDMLASMRLCANVP----------------------------------AQHAIQTALGG-------YQSI-NELILPGG 304 (404)
T ss_pred HHHHHhccccCCCcH----------------------------------HHHHHHHHhcC-------chhH-HHHHHHHH
Confidence 443332233456666 55555555431 1111 11222234
Q ss_pred HHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCcc
Q psy13922 343 SLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTY 422 (509)
Q Consensus 343 ~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~ 422 (509)
.+.++++.+.+.|++++++.+.+|++|+|+|++++... .+..++.+++.+++.++||.+.||..|+.
T Consensus 305 ~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~--------~~~~~~~~~~~~~l~~~gv~v~pg~~F~~----- 371 (404)
T PRK09265 305 RLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKV--------YPIHDDEQFVLDLLLQEKVLLVQGTGFNW----- 371 (404)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccc--------cCCCCHHHHHHHHHHhCCEEEECchhhCC-----
Confidence 56777899999998888888889999999998775210 01223455577899999999999998865
Q ss_pred ccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHH
Q psy13922 423 HFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 423 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~ 502 (509)
.+.+ ++|++++.+++++++++++|+++++
T Consensus 372 -------------------------------------------~~~~--------~~Ri~~~~~~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 372 -------------------------------------------PEPD--------HFRIVTLPRVDDLEEAIGRIGRFLS 400 (404)
T ss_pred -------------------------------------------CCCC--------eEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 2223 9999999999999999999999887
Q ss_pred HHH
Q psy13922 503 EFL 505 (509)
Q Consensus 503 ~~~ 505 (509)
.+.
T Consensus 401 ~~~ 403 (404)
T PRK09265 401 GYR 403 (404)
T ss_pred Hhc
Confidence 553
No 54
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-43 Score=366.22 Aligned_cols=350 Identities=27% Similarity=0.459 Sum_probs=287.3
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ |+.+.+++.+.+.. ... +|++..|.+.||+++++++.+.+|..+++++|++|+|+++++..++.+++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~---~~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~ 114 (393)
T PRK05764 39 GEPDFDTPEHIKEAAIEALDD---GKT-KYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDP 114 (393)
T ss_pred CCCCCCCCHHHHHHHHHHHhc---CCC-CcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCC
Confidence 56665 47888888888775 333 4999999999999999999998888888999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..+...++.+|.+++.++.+++.+|.+|++.+++.+++ ++++|++++|+||||.++|.++
T Consensus 115 gd----~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~p~NPtG~~~~~~~ 185 (393)
T PRK05764 115 GD----EVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP-----KTKALILNSPSNPTGAVYSPEE 185 (393)
T ss_pred CC----EEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc-----cceEEEEECCCCCCCcccCHHH
Confidence 88 99999999999999999999999999998666789999999999876 7899999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|++||+++|+||+|.++.+++. .+.++.++..+. ..++++++||||.+ |++|+|+||++ ++++
T Consensus 186 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~-----~~~~i~~~s~SK~~-~~~G~RiG~i~---~~~~ 255 (393)
T PRK05764 186 LEAIADVAVEHDIWVLSDEIYEKLVYDGA-EFTSIASLSPEL-----RDRTITVNGFSKAY-AMTGWRLGYAA---GPKE 255 (393)
T ss_pred HHHHHHHHHHCCcEEEEeccccceeeCCC-CcccHHHcCCCC-----cCCEEEEecCcccc-cCccceeEEEe---cCHH
Confidence 99999999999999999999999987532 334555543322 23589999999999 79999999998 8999
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+..... ...+++.+ .|.++..+++. ..++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~~----------~~~~~~ 291 (393)
T PRK05764 256 LIKAMSKLQSHSTSNPTSI----------------------------------AQYAAVAALNG----------PQDEVE 291 (393)
T ss_pred HHHHHHHHHhhcccCCChH----------------------------------HHHHHHHHHcC----------ChHHHH
Confidence 9999987765 33455666 44444444330 113477
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
++++.++++++.+.+.|++++++.+..|+|++|+|+++.-... ..+. ++.++...+++++||.++||..|+.
T Consensus 292 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~------~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~- 363 (393)
T PRK05764 292 EMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLG------KSIT-DSLEFAEALLEEAGVAVVPGIAFGA- 363 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccc------cccC-CHHHHHHHHHHhCCEEEccccccCC-
Confidence 8888999999999999999888998889999999987752110 0011 2356667778889999999988765
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
++ ++|++++.+++++++++++|+
T Consensus 364 -----------------------------------------------~~----------~vRis~~~~~~~~~~~i~~l~ 386 (393)
T PRK05764 364 -----------------------------------------------PG----------YVRLSYATSLEDLEEGLERIE 386 (393)
T ss_pred -----------------------------------------------CC----------EEEEEecCCHHHHHHHHHHHH
Confidence 33 999999999999999999999
Q ss_pred HHHHH
Q psy13922 499 EFHEE 503 (509)
Q Consensus 499 ~~~~~ 503 (509)
+++++
T Consensus 387 ~~~~~ 391 (393)
T PRK05764 387 RFLES 391 (393)
T ss_pred HHHHh
Confidence 99864
No 55
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1e-43 Score=368.06 Aligned_cols=359 Identities=17% Similarity=0.247 Sum_probs=289.4
Q ss_pred HHHHHHHhhcCCCCC----CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cE
Q psy13922 7 LSLQVLALVSLPQLF----DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DV 79 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~----~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i 79 (509)
.++.+..+++..+++ |.|.+ |+.+.+++.+.+.. . ..+|++..|.+++|+++++++.+.+|...+++ +|
T Consensus 19 ~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~---~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i 94 (386)
T PRK09082 19 IFTVMSALAAEHGAINLSQGFPDFDGPPYLVEALAYAMAA---G-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEI 94 (386)
T ss_pred HHHHHHHHHhhCCEEEecCCCCCCCCCHHHHHHHHHHHHc---C-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcE
Confidence 344455555544333 55665 57888888888765 2 34599999999999999999998889877776 89
Q ss_pred EEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCc
Q psy13922 80 ILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNP 159 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~ 159 (509)
++|+|+++++..++..++++|| +|+++.|+|..+...++..|.+++.++.+++ +|.+|++.+++.+++ ++
T Consensus 95 ~~t~G~~~al~~~~~~~~~~gd----~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~-----~~ 164 (386)
T PRK09082 95 TVTAGATEALFAAILALVRPGD----EVIVFDPSYDSYAPAIELAGGRAVRVALQPP-DFRVDWQRFAAAISP-----RT 164 (386)
T ss_pred EEeCCHHHHHHHHHHHHcCCCC----EEEEeCCCchhhHHHHHHcCCEEEEEecCcc-cccCCHHHHHHhcCc-----cc
Confidence 9999999999999999999998 9999999999999999999999999999754 589999999999876 79
Q ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 160 RAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 160 ~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. .+.++.++. +. ..++++++||||.
T Consensus 165 ~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~-~~~s~~~~~-~~-----~~~~i~~~S~SK~ 237 (386)
T PRK09082 165 RLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA-GHASVLRHP-EL-----RERAFVVSSFGKT 237 (386)
T ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC-CCCChhhCc-Cc-----cCcEEEEeechhh
Confidence 9999999999999999999999999999999999999999999988642 344544431 11 2359999999999
Q ss_pred cCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhc
Q psy13922 240 YMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDC 318 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 318 (509)
| |++|+|+||++ +++++++.+.+... ...+++.+ .|.++..
T Consensus 238 ~-~~~G~RiG~iv---~~~~l~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~ 279 (386)
T PRK09082 238 Y-HVTGWKVGYCV---APAALSAEFRKVHQYNTFTVNTP----------------------------------AQLALAD 279 (386)
T ss_pred c-cchhhhhhhhh---CCHHHHHHHHHHHhhhcCCCChH----------------------------------HHHHHHH
Confidence 9 79999999998 78999999988765 34456666 5555444
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHH
Q psy13922 319 VVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYA 398 (509)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 398 (509)
++.. ..++.+++++.++++++.+.+.|++. ++.+.+++|++|+|++++-.. +. ++.+++
T Consensus 280 ~l~~----------~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~~~~~~~~---------~~-~~~~~~ 338 (386)
T PRK09082 280 YLRA----------EPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQLVDYSAIS---------DL-DDVEFC 338 (386)
T ss_pred HHhC----------ChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEEEeccccC---------CC-CHHHHH
Confidence 4431 22346778899999999999999987 888889999999998775100 22 356667
Q ss_pred HHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCcee
Q psy13922 399 FELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYH 478 (509)
Q Consensus 399 ~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (509)
..+++++||.+.||+.|+..+ .+.+ +
T Consensus 339 ~~l~~~~~v~v~pg~~f~~~~----------------------------------------------~~~~--------~ 364 (386)
T PRK09082 339 QWLTREHGVAAIPLSVFYADP----------------------------------------------FPHR--------L 364 (386)
T ss_pred HHHHHhCCEEEeCcHHhCCCC----------------------------------------------CCCC--------E
Confidence 778889999999999886410 1222 9
Q ss_pred EEEEeecChHHHHHHHHHHHH
Q psy13922 479 FRTTILPQPEKLKAMLEKFRE 499 (509)
Q Consensus 479 ~Rls~~~~~~~i~~~~~~l~~ 499 (509)
+|++++.+++++++++++|++
T Consensus 365 ~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 365 VRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred EEEEecCCHHHHHHHHHHHhh
Confidence 999999999999999999975
No 56
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-43 Score=371.76 Aligned_cols=373 Identities=22% Similarity=0.321 Sum_probs=270.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhh-hcCCCC-C--CCcEEEeCCHHHHHHHHHHH
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISR-RDGQPA-D--WQDVILSAGASDGIKSVLKL 95 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~-~~g~~~-~--~~~i~~t~G~~~al~~~~~~ 95 (509)
|.|+| |+.+.+.+ ..+.. . +|+++.|.+++|+++++++.+ .++... . .++|++|+|+++++..++.+
T Consensus 108 g~p~~~~~~~v~e~~-~~~~~-----~-~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~a 180 (527)
T PRK09275 108 DQLGFDADEFVYELV-DGIIG-----D-NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDS 180 (527)
T ss_pred CCCCCCCCHHHHHHH-HHHhc-----C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHH
Confidence 66666 45566644 44432 2 399999999999999985544 333332 2 34899999999999999987
Q ss_pred -----hhcCCCCCCCeEEEcCCCChhHHHHHHhc--CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 96 -----LIEDVDGKKPGVLIPIPQYPLYSASLAEF--NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 96 -----l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
++++|| +|+++.|+|..|...++.. |.+++.++.+++.+|.+|++.|++++++ ++++|++++||
T Consensus 181 L~~~~ll~pGD----~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~-----~tkai~l~nP~ 251 (527)
T PRK09275 181 LKENGLLKAGD----KIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP-----SIKALFLVNPS 251 (527)
T ss_pred HhhhhcCCCCC----EEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC-----CCCEEEEeCCc
Confidence 688998 9999999999999998776 4666777666667899999999998776 89999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHH--CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCC
Q psy13922 169 NPTGQVLTKENIQDIIKFAHR--EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGL 246 (509)
Q Consensus 169 NPtG~~~s~~~l~~l~~ia~~--~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Gl 246 (509)
||||.++|++++++|+++|++ +|++||+||+|.+|.+ .+.++.+..+ .++|+++||||.| |++||
T Consensus 252 NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~----~~~s~~~~~~--------~~~I~v~SfSK~f-~mtG~ 318 (527)
T PRK09275 252 NPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD----DFRSLFAVLP--------YNTILVYSFSKYF-GATGW 318 (527)
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc----cccCHHHhCC--------CCEEEEeehhhhc-cCcHh
Confidence 999999999999999999964 5999999999999874 2345444321 2499999999999 79999
Q ss_pred eeEEEeeecCCHH-----HHHHH---------HHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhh-hcccCcc-
Q psy13922 247 RGGYSEVINLDPG-----VKAML---------HKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVL-DGCRGQS- 310 (509)
Q Consensus 247 r~G~v~~~~~~~~-----~~~~l---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 310 (509)
|+||++ ++++ +++.+ +++.+....|... +|.+.++++..++. +.....+
T Consensus 319 RlG~i~---~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~------------~fidrlvad~~~v~~~~t~~~s~ 383 (527)
T PRK09275 319 RLGVIA---LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKL------------KFIDRLVADSRQVALNHTAGLST 383 (527)
T ss_pred HHhhhh---cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchh------------hhHHHHHHHHHHHHHhhccCCCC
Confidence 999998 5554 33333 2223333344433 45555555554222 1111111
Q ss_pred cccchh-----hcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCH-----
Q psy13922 311 VGQTVM-----DCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPA----- 380 (509)
Q Consensus 311 ~~~~al-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~----- 380 (509)
..|.++ ..+++ ....+.+++++.+++|++.+.+.|. + ++...+|+|+||+|+++....
T Consensus 384 p~Q~a~al~~~~all~----------~~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~~~~p~g~fY~~~di~~~~~~~~g 451 (527)
T PRK09275 384 PQQVQMALFSLFALLD----------EEDAYKKAMKDIIRRRYKALYEGLG-L-PEPEDPNNAAYYTLIDLEEWAEKNYG 451 (527)
T ss_pred HHHHHHHHHHHHHHHh----------CchHHHHHHHHHHHHHHHHHHHHcC-C-CCcCCCCCeeEEEEEEhHHhhhhccC
Confidence 134432 22232 1122378889999999999998883 2 334457999999998875211
Q ss_pred -HHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhc
Q psy13922 381 -KAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLER 459 (509)
Q Consensus 381 -~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (509)
.+..+. ....++.+++.++++++||++.||..|+.
T Consensus 452 ~~f~~~l--~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~------------------------------------------ 487 (527)
T PRK09275 452 KEFADYL--KKNYSPVDLLFRLAEETGVVLLPGGGFGG------------------------------------------ 487 (527)
T ss_pred chhhhhh--hccCCHHHHHHHHHhcCCEEEeCchhhCC------------------------------------------
Confidence 011111 01124678899999999999999999976
Q ss_pred ccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHHHHhhcC
Q psy13922 460 TGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEEFLAKYK 509 (509)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~~~~~~ 509 (509)
+ .+ ++|+|++ .+++++.++.+||+++++++..+|+
T Consensus 488 ------~-~~--------~vRis~a~~~~~~~~~~~~rl~~~l~~y~~~~~ 523 (527)
T PRK09275 488 ------P-EW--------SVRVSLANLNEEDYAKIGKAIRKLLDEYYEEYK 523 (527)
T ss_pred ------C-CC--------eEEEEEecCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22 8999999 5889999999999999999999985
No 57
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-42 Score=360.74 Aligned_cols=367 Identities=25% Similarity=0.390 Sum_probs=286.9
Q ss_pred HHHHHHHHhhc-----CCCCC----CCCC--CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCC
Q psy13922 6 SLSLQVLALVS-----LPQLF----DDPR--FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPA 74 (509)
Q Consensus 6 ~~~~~~~~~~~-----~~~~~----~~~~--~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~ 74 (509)
+.++.++.+.. .+.++ |.|. .|+.+.+++.+.... ..+|++..|.+++|+++++++. .+|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-----~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~ 86 (397)
T PRK07568 13 SPIRKLVPYADEAKKRGIKVYHLNIGQPDIKTPEVFFEAIKNYDEE-----VLAYSHSQGIPELREAFAKYYK-KWGIDV 86 (397)
T ss_pred chHHHHHHHHHHHHhhCCCEEEecCCCCCCCCCHHHHHHHHHHhcC-----CcCcCCCCCCHHHHHHHHHHHH-HhCCCC
Confidence 45666665532 12232 4444 467788877665432 3459999999999999999998 568888
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCC-CHHHHHHHHHhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGL-PISELERSITEA 153 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~~L~~~i~~~ 153 (509)
++++|++|+|+++++..++..++++|| +|+++.|+|..+...++..|.+++.++.+.+.+|.+ +++.|++.+++
T Consensus 87 ~~~~i~~t~G~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~- 161 (397)
T PRK07568 87 EPDEILITNGGSEAILFAMMAICDPGD----EILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP- 161 (397)
T ss_pred CcceEEEcCChHHHHHHHHHHhcCCCC----EEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc-
Confidence 999999999999999999999999988 999999999999998999999999999875445553 68999988876
Q ss_pred hccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEE
Q psy13922 154 RKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASF 233 (509)
Q Consensus 154 ~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i 233 (509)
++++|++++||||||.+++.+++++|+++|+++|++||+|++|.+|.+++. .+.++.++.. . ..+++++
T Consensus 162 ----~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~s~~~~~~-~-----~~~~i~~ 230 (397)
T PRK07568 162 ----KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL-KYTSALSLEG-L-----EDRVIII 230 (397)
T ss_pred ----cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC-CccChhhcCC-C-----cCCEEEE
Confidence 799999999999999999999999999999999999999999999988642 3445544321 0 2358999
Q ss_pred EecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCccccc
Q psy13922 234 MSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQ 313 (509)
Q Consensus 234 ~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (509)
+||||.| |++|+|+||++. .++++++.+.+......+++.+ .|
T Consensus 231 ~S~SK~~-~~~G~R~G~~~~--~~~~~~~~~~~~~~~~~~~s~~----------------------------------~q 273 (397)
T PRK07568 231 DSVSKRY-SACGARIGCLIS--KNKELIAAAMKLCQARLSPPTL----------------------------------EQ 273 (397)
T ss_pred ecchhhc-cCCCcceEEEec--CCHHHHHHHHHHhhccCCCCcH----------------------------------HH
Confidence 9999999 789999999972 4678888876654433456666 55
Q ss_pred chhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCC
Q psy13922 314 TVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCP 393 (509)
Q Consensus 314 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 393 (509)
.++..+++. ...+.+++++.++++++.+.+.|++++++.+..|+|++|+|+++.. .+
T Consensus 274 ~~~~~~l~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~-------------~~ 330 (397)
T PRK07568 274 IGAAALLDT----------PESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPV-------------DD 330 (397)
T ss_pred HHHHHHhhC----------CHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCC-------------CC
Confidence 555555431 1234778899999999999999999888888889999999977641 13
Q ss_pred cHHHHHHHHhh-----cCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCC
Q psy13922 394 SVLYAFELLER-----TGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGA 468 (509)
Q Consensus 394 ~~~~~~~ll~~-----~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (509)
+.+++..++++ +||.+.||..|+..++ .+.
T Consensus 331 ~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~---------------------------------------------~~~ 365 (397)
T PRK07568 331 AEDFAKWLLTDFNYNGETVMVAPASGFYATPG---------------------------------------------LGK 365 (397)
T ss_pred HHHHHHHHHhhcccccceEEEeCchHhcCCCC---------------------------------------------CCC
Confidence 45556666654 7999999998864100 112
Q ss_pred CCCCCCCceeEEEEeecChHHHHHHHHHHHHHHHHHHhh
Q psy13922 469 GFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 469 ~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
+ +|||+|+.+++++++++++|+++++++.++
T Consensus 366 ~--------~iRls~~~~~~~~~~~~~~l~~~l~~~~~~ 396 (397)
T PRK07568 366 N--------EIRIAYVLNEEDLKRAMEILKEALEKYNKR 396 (397)
T ss_pred C--------eEEEEEeCCHHHHHHHHHHHHHHHHHhhcc
Confidence 2 999999988999999999999999876543
No 58
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-42 Score=359.17 Aligned_cols=344 Identities=22% Similarity=0.310 Sum_probs=279.1
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ ++.+.+++.+.+.. .....|++..|.++||+++++++.+.+|..+++++|++|+|+++++..++.+++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 113 (386)
T PRK07550 37 AVPGYPPPPELLRALAEAAAD---PAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGA 113 (386)
T ss_pred CCCCCCCCHHHHHHHHHHHhC---cCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCC
Confidence 55554 46788888877754 34556999999999999999999999998899999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|..+...++..|++++.++.+++.+|.+|++.+++.+++ ++++|++++||||||.++|.++
T Consensus 114 gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~-----~~~~v~~~~P~NPtG~~~~~~~ 184 (386)
T PRK07550 114 GD----EVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP-----RTRAIALVTPNNPTGVVYPPEL 184 (386)
T ss_pred CC----EEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc-----cCcEEEEeCCCCCCCcccCHHH
Confidence 98 99999999999999999999999999998766788999999999987 7999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|+++|++||+||+|.+|.++.. ...+..... + .+.++++++||||.+ |++|+|+||++ .+++
T Consensus 185 ~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~-~~~~~~~~~-~-----~~~~~i~~~S~SK~~-g~~G~RiG~i~---~~~~ 253 (386)
T PRK07550 185 LHELYDLARRHGIALILDETYRDFDSGGG-APHDLFADP-D-----WDDTLVHLYSFSKSY-ALTGHRVGAVV---ASPA 253 (386)
T ss_pred HHHHHHHHHHcCeEEEEeccchhhccCCC-CCcchhhCC-C-----ccccEEEEecchhhc-cCcccceEeee---cCHH
Confidence 99999999999999999999999876432 122222210 1 123589999999999 79999999998 7889
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+.+... ...+++.+ .|.++..++. .+.++++
T Consensus 254 ~~~~~~~~~~~~~~~~s~~----------------------------------~q~~~~~~l~----------~~~~~~~ 289 (386)
T PRK07550 254 RIAEIEKFMDTVAICAPRI----------------------------------GQIAVAWGLP----------NLADWRA 289 (386)
T ss_pred HHHHHHHHHhhcccCCCcH----------------------------------HHHHHHHHhc----------cHHHHHH
Confidence 9988887765 33455666 5555555543 1234477
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
+.++.++++++.+.+.|.+++++.+ .+.+++|+|++++. .+ .++.+++..+++++||.+.||..|+.
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~~~~~~~~~----------~~-~~~~~l~~~l~~~~gv~v~pg~~f~~- 356 (386)
T PRK07550 290 GNRAEIARRRDAFRAVFARLPGWEL-LASGAYFAYVRHPF----------PD-RPSREVARRLAKEAGILCLPGTMFGP- 356 (386)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcee-CCCceEEEEecCCC----------CC-CCHHHHHHHHHHhcCEEEeCchhhCC-
Confidence 8888999999999999998756654 46689999977641 01 23556667778889999999998865
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKF 497 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l 497 (509)
.+.+ ++||+++ .+++++++++++|
T Consensus 357 -----------------------------------------------~~~~--------~iRis~~~~~~~~~~~~~~~l 381 (386)
T PRK07550 357 -----------------------------------------------GQEG--------YLRLAFANADVAGIGELVERL 381 (386)
T ss_pred -----------------------------------------------CCCC--------EEEEEeecCCHHHHHHHHHHH
Confidence 2223 8999999 6889999999999
Q ss_pred HHH
Q psy13922 498 REF 500 (509)
Q Consensus 498 ~~~ 500 (509)
.++
T Consensus 382 ~~~ 384 (386)
T PRK07550 382 RAF 384 (386)
T ss_pred Hhh
Confidence 876
No 59
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.6e-42 Score=360.22 Aligned_cols=350 Identities=22% Similarity=0.356 Sum_probs=279.0
Q ss_pred CCCC--CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPR--FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~--~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.|. .|+.+.+++.+.+.. .....|+++.|.+++|+++++++++++|+.++++ +|++|+|+++++..++..+++
T Consensus 37 g~p~~~~~~~~~~~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~ 113 (395)
T PRK08175 37 GNPDGPTPPHIVEKLCEVAQR---PDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLD 113 (395)
T ss_pred CCCCCCCCHHHHHHHHHHHhC---CCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCC
Confidence 4444 366788887777655 3445699999999999999999998889888887 799999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| +|+++.|+|..+...++..|++++.++.++++. +.+.+++.++... .++++|++++||||||.+++.+
T Consensus 114 ~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~--~~~~~v~i~~p~NPtG~~~~~~ 184 (395)
T PRK08175 114 HGD----TVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESY--PKPKMMILGFPSNPTAQCVELE 184 (395)
T ss_pred CCC----EEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhcc--CCceEEEEeCCCCCCCCCCCHH
Confidence 998 999999999999999999999999999986643 4788888776421 1689999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|++||+||+|.++.+++. ...++.++. .. ...+++++||||.| |+||+|+||++ +++
T Consensus 185 ~~~~i~~~a~~~~i~ii~De~y~~l~~~~~-~~~~~~~~~-~~-----~~~~i~~~S~SK~~-g~pGlRiG~~~---~~~ 253 (395)
T PRK08175 185 FFEKVVALAKRYDVLVVHDLAYADIVYDGW-KAPSIMQVP-GA-----KDVAVEFFTLSKSY-NMAGWRIGFMV---GNP 253 (395)
T ss_pred HHHHHHHHHHHcCcEEEEecchHhhccCCC-CCcchhcCC-Cc-----ccCEEEEeeccccc-cCcchhheeee---CCH
Confidence 999999999999999999999999988532 334443321 00 12378899999999 79999999998 899
Q ss_pred HHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++++.+.... ..+.+.+ .|.+...++. ....++
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~----------~~~~~~ 289 (395)
T PRK08175 254 ELVSALARIKSYHDYGTFTP----------------------------------LQVAAIAALE----------GDQQCV 289 (395)
T ss_pred HHHHHHHHHHhhcccCCCcH----------------------------------HHHHHHHHHh----------CcHHHH
Confidence 999999887652 3344454 3333333332 112347
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+++++.++++++.+.+.|+.+ ++.+..+++|+|+|++++... ...++.+++.++++++||.+.||..|+.
T Consensus 290 ~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~---------~~~~~~~~~~~l~~~~gv~v~p~~~f~~ 359 (395)
T PRK08175 290 RDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEPY---------AAMGSLEFAKKLLNEAKVCVSPGIGFGD 359 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCccc---------CCCCHHHHHHHHHHhCCEEEeCchhhCc
Confidence 888999999999999999998 788888999999998775210 0013566667788889999999998865
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+.+ ++||+++.+.+.+++++++|
T Consensus 360 ------------------------------------------------~~~~--------~lRis~~~~~~~~~~al~~l 383 (395)
T PRK08175 360 ------------------------------------------------YGDT--------HVRFALIENRDRIRQAIRGI 383 (395)
T ss_pred ------------------------------------------------CCCC--------eEEEEeCCCHHHHHHHHHHH
Confidence 3333 89999998899999999999
Q ss_pred HHHHHHH
Q psy13922 498 REFHEEF 504 (509)
Q Consensus 498 ~~~~~~~ 504 (509)
+++++++
T Consensus 384 ~~~l~~~ 390 (395)
T PRK08175 384 KAMFRAD 390 (395)
T ss_pred HHHHHhc
Confidence 9998753
No 60
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.6e-42 Score=364.37 Aligned_cols=327 Identities=17% Similarity=0.215 Sum_probs=264.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
++.+.+++.+.... ...|+++.|.++||+++++++....+ .+++|++|+|+++++.+++++++++|| .
T Consensus 100 ~p~~~~~~~~~~~~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~~~~~~l~~pgd----~ 167 (431)
T PRK15481 100 LPDLSRYFARLSRT-----PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIERLLCAHLLPGD----S 167 (431)
T ss_pred hHHHHHHHHHhhhh-----hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHHHHHHHhCCCCC----E
Confidence 34566666655433 34599999999999999999865432 356999999999999999999999998 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe-CCCCCCCCCCCHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII-NPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~-~p~NPtG~~~s~~~l~~l~~ 185 (509)
|+++.|+|..+...++..|++++.++++++ ++|++.|+++++. ++++++++ +||||||.++|.+++++|++
T Consensus 168 Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~-----~~k~i~~~p~p~NPTG~~~s~~~~~~l~~ 239 (431)
T PRK15481 168 VAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQ-----GARAVILTPRAHNPTGCSLSARRAAALRN 239 (431)
T ss_pred EEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhc-----CCCEEEECCCCCCCCCccCCHHHHHHHHH
Confidence 999999999999999999999999999755 5899999999876 78999986 99999999999999999999
Q ss_pred HHHHC-CcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHH
Q psy13922 186 FAHRE-KLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 186 ia~~~-~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l 264 (509)
+|+++ +++||+||+|.+|.+.+ ..+.... . ..++|+++||||.| | ||+|+||++ +++++++.+
T Consensus 240 la~~~~~~~ii~De~Y~~~~~~~---~~~~~~~------~--~~~vi~~~SfSK~~-~-~GlRiG~~i---~~~~~~~~~ 303 (431)
T PRK15481 240 LLARYPQVLVIIDDHFALLSSSP---YHSVIPQ------T--TQRWALIRSVSKAL-G-PDLRLAFVA---SDSATSARL 303 (431)
T ss_pred HHHhcCCceEEecCchhhhccCC---CCCCCcC------C--CCCEEEEeeecccc-C-CCceeEEEe---CCHHHHHHH
Confidence 99999 99999999999997642 1221111 1 23599999999999 7 999999998 899999999
Q ss_pred HHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHH
Q psy13922 265 HKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDS 343 (509)
Q Consensus 265 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (509)
...... ..+.+.+ .|.++..+++ ++.|+ ++++++++.
T Consensus 304 ~~~~~~~~~~~s~~----------------------------------~q~a~~~~l~-----~~~~~---~~l~~~~~~ 341 (431)
T PRK15481 304 RLRLNSGTQWVSHL----------------------------------LQDLVYACLT-----DPEYQ---ARLAQARLF 341 (431)
T ss_pred HHHHhccccCCCHH----------------------------------HHHHHHHHHh-----CccHH---HHHHHHHHH
Confidence 765542 3456666 6666666665 22233 448889999
Q ss_pred HHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccc
Q psy13922 344 LKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYH 423 (509)
Q Consensus 344 ~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~ 423 (509)
++++++.+.+.|++. ++.+..|++|+|+|++++. ++..++ ..|.++||.+.||..|+..
T Consensus 342 ~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~--------------~~~~~~-~~l~~~gV~v~pg~~f~~~----- 400 (431)
T PRK15481 342 YAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDT--------------DSQATA-LTLAKSGWLVREGEAFGVS----- 400 (431)
T ss_pred HHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCC--------------CHHHHH-HHHHHCCcEEecCCccccC-----
Confidence 999999999999998 8887789999999987751 233434 4455789999999988651
Q ss_pred cccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHH
Q psy13922 424 FRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 424 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~ 502 (509)
.+.. ++||+++ .+++++++++++|++++.
T Consensus 401 ------------------------------------------~~~~--------~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 401 ------------------------------------------APSH--------GLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred ------------------------------------------CCCC--------eEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 1112 8999999 688999999999999874
No 61
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=4.5e-42 Score=361.21 Aligned_cols=373 Identities=21% Similarity=0.309 Sum_probs=271.5
Q ss_pred CCCCCC-HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHH-HHHhhhcCCC-CCCC--cEEEeCCHHHHHHHHHHH-
Q psy13922 22 DDPRFP-DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVA-QYISRRDGQP-ADWQ--DVILSAGASDGIKSVLKL- 95 (509)
Q Consensus 22 ~~~~~p-~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va-~~l~~~~g~~-~~~~--~i~~t~G~~~al~~~~~~- 95 (509)
|.|+|| +..+.++.+.+.. . +|+++.|..+++++++ +|+.+.++.. .+++ +|++|+|+++++..++.+
T Consensus 102 g~p~~~~~~~~~~~~~~~~~---~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l 175 (521)
T TIGR03801 102 DQLGFDPDAFLYEMCDGIIG---D---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSL 175 (521)
T ss_pred CCCCCCCCHHHHHHHHHhhc---C---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHH
Confidence 666663 4455555554432 2 3987777788887777 5666655433 3444 899999999999999987
Q ss_pred ----hhcCCCCCCCeEEEcCCCChhHHHHHHhc--CCEEEEEecCCCCC-----CCCCHHHHHHHHHhhhccCCceEEEE
Q psy13922 96 ----LIEDVDGKKPGVLIPIPQYPLYSASLAEF--NMEQIGYYLDESKQ-----WGLPISELERSITEARKHCNPRAIVI 164 (509)
Q Consensus 96 ----l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~-----~~~d~~~L~~~i~~~~~~~~~~~ivi 164 (509)
++++|| +|+++.|+|.+|...++.. |.+++.++.+++.+ |.+|.+.+++++++ ++++|++
T Consensus 176 ~~~~ll~pGD----~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~-----~~kai~l 246 (521)
T TIGR03801 176 KANELLKKGD----KIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDP-----SIKALFV 246 (521)
T ss_pred hHhhcCCCCC----EEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCC-----CCcEEEE
Confidence 688998 9999999999999987765 78888888765433 99999999987765 7999999
Q ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHC--CcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 165 INPGNPTGQVLTKENIQDIIKFAHRE--KLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 165 ~~p~NPtG~~~s~~~l~~l~~ia~~~--~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
+|||||||.++|++++++|+++|+++ |++||+||+|.+|.+ .+.++.+..+ .++|+++||||.| |
T Consensus 247 ~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~----~~~sl~~~~~--------~~vI~v~SfSK~f-g 313 (521)
T TIGR03801 247 VNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD----DFRSLFAELP--------YNTIGVYSFSKYF-G 313 (521)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc----cccchhhhCC--------CCEEEEEcchhhc-c
Confidence 99999999999999999999999986 999999999999874 2445444321 2499999999999 7
Q ss_pred CCCCeeEEEeeecCCHH-HHH------------HHH-HhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhh-ccc
Q psy13922 243 ECGLRGGYSEVINLDPG-VKA------------MLH-KSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLD-GCR 307 (509)
Q Consensus 243 ~~Glr~G~v~~~~~~~~-~~~------------~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 307 (509)
++|||+||++ .+++ +.+ .+. ++.+....|..+ +|.+.+++++.++.. ...
T Consensus 314 ~~G~RlG~i~---~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~------------~fidr~vadsr~v~~~~~~ 378 (521)
T TIGR03801 314 ATGWRLGTIA---LHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKL------------KFIDRLVADSRQVALNHTA 378 (521)
T ss_pred Cchhhhhhhh---cCchHHHHHHHHhccHHHHHHHhhhhccccCChhhh------------hhHHHHHHHHHHHHHhccC
Confidence 9999999998 4433 222 221 223334445554 677778877764332 222
Q ss_pred Cccc-ccc-----hhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCH-
Q psy13922 308 GQSV-GQT-----VMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPA- 380 (509)
Q Consensus 308 ~~~~-~~~-----al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~- 380 (509)
+.+. .|. ++..+++. ...+.+++++.+++|++.+.+.| .+ .+...++.|+||+|+++..-.
T Consensus 379 g~s~p~Q~q~al~a~~all~~----------~~~y~~~~~~~~~~R~~~l~~~L-g~-~~~~~~~~g~~Y~~~di~~~~~ 446 (521)
T TIGR03801 379 GLSTPQQVQMALFSLFALMDK----------ENAYKAETKDICRRREKLLFRGL-GL-PLQEDPNDVAYYTLIDLEEWAE 446 (521)
T ss_pred CCCcHHHHHHHHHHHHHHhcc----------chhHHHHHHHHHHHHHHHHHHhc-CC-CCcCCCCCeEEEEEeehHHHHH
Confidence 2222 333 22233321 12237888899999999999998 22 233457899999998875111
Q ss_pred -----HHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhh
Q psy13922 381 -----KAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFE 455 (509)
Q Consensus 381 -----~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (509)
++.....+ ..++.+++.++++++||.+.||..|+.
T Consensus 447 ~~~~~~f~~~l~~--~~~~~~~~~~L~~e~gV~v~PG~~Fg~-------------------------------------- 486 (521)
T TIGR03801 447 KNYGEEFSSYLKK--NYSPVDVLFRLAEETGIVLLPGGGFGG-------------------------------------- 486 (521)
T ss_pred HhcchHHHHHHhc--cCCHHHHHHHHHHhCCEEEeCchhcCC--------------------------------------
Confidence 01111111 114678899999999999999999986
Q ss_pred hhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHHHHhhc
Q psy13922 456 SLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEEFLAKY 508 (509)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~~~~~ 508 (509)
+ .+ ++|+|++ .++++++++.++|++++++|.++|
T Consensus 487 ----------~-~~--------~vRisla~l~~~~~~~~~~rl~~~~~~~~~~~ 521 (521)
T TIGR03801 487 ----------P-EW--------SVRVSLANLNEYDYAEIGRAIRKILDEYYEAW 521 (521)
T ss_pred ----------C-CC--------eEEEEecCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 22 8999999 688999999999999999999887
No 62
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=354.10 Aligned_cols=312 Identities=19% Similarity=0.274 Sum_probs=237.8
Q ss_pred HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcE--EEeCCHHHHHHHHHHHh--hcCCCCC
Q psy13922 28 DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDV--ILSAGASDGIKSVLKLL--IEDVDGK 103 (509)
Q Consensus 28 ~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l--~~~gd~~ 103 (509)
+.+.+++.+.++. ....+|++..|.++||+++++++.+..+..+++++| ++|+|+++++.++++.+ +++||
T Consensus 47 ~~l~~a~~~~~~~---~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd-- 121 (396)
T PRK09257 47 RAVKKAEARLLET---ETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDA-- 121 (396)
T ss_pred HHHHHHHHHhccc---ccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCC--
Confidence 5677777766554 244469999999999999999997765555678877 99999999999999777 47888
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
.|++++|+|..|...++..|++++.+|..+..+|++|++.+++.++... .+..++++++||||||.++|.+++++|
T Consensus 122 --~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~--~~~~~~i~~~p~NPTG~~~s~~~~~~l 197 (396)
T PRK09257 122 --KVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAP--AGDVVLLHGCCHNPTGADLTPEQWDEL 197 (396)
T ss_pred --eEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999998433357999999999887521 134555569999999999999999999
Q ss_pred HHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH----
Q psy13922 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG---- 259 (509)
Q Consensus 184 ~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~---- 259 (509)
+++|++||++||+||+|.++.++.+....++..+... ..++|+++||||.| |++|+|+||++++..+++
T Consensus 198 ~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~------~~~vi~i~SfSK~~-~~~GlRiG~~~~~~~~~~~~~~ 270 (396)
T PRK09257 198 AELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAA------GLELLVASSFSKNF-GLYGERVGALSVVAEDAEEADR 270 (396)
T ss_pred HHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhc------CCcEEEEEEcCCcC-ccccccceeEEEEeCCHHHHHH
Confidence 9999999999999999999986422123344443221 23499999999999 688999999973234544
Q ss_pred HHHHHHHhh-hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch-HHHHHHH
Q psy13922 260 VKAMLHKSI-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY-EQFSREK 337 (509)
Q Consensus 260 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~-~~~~~~~ 337 (509)
++.++.... ..+.+++.+ .|.++..++. ++.+ ..+.+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~-----~~~~~~~~~~~~ 311 (396)
T PRK09257 271 VLSQLKATIRTNYSNPPAH----------------------------------GAAIVATILN-----DPELRAEWEAEL 311 (396)
T ss_pred HHHHHHHHhhhhcCCCcHH----------------------------------HHHHHHHHhC-----CHHHHHHHHHHH
Confidence 334443332 244556666 4555544444 2222 2345668
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC---CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIE---GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
+++++.++++++.+.+.|++.. ++.+..|+||+|+|++++ .+++.++++++||.+.|
T Consensus 312 ~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~-----------------~~~~~~l~~~~~V~~~p 371 (396)
T PRK09257 312 EEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT-----------------PEQVDRLREEFGVYAVG 371 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCC-----------------HHHHHHHHHcCCEEEcC
Confidence 8999999999999999999862 367788999999997653 12367888999998874
No 63
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-41 Score=348.76 Aligned_cols=336 Identities=23% Similarity=0.416 Sum_probs=270.0
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|.+ |+.+.+++.+.++..... ..+|++..|.+++|++++++++..++..+++++|++|+|+++++..+++.++++
T Consensus 41 g~p~~~~~~~v~~a~~~~~~~~~~~-~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~ 119 (394)
T PRK06836 41 GNPSVPPPAAVKEALRELAEEEDPG-LHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNP 119 (394)
T ss_pred cCCCCCCCHHHHHHHHHHHhcCCcC-cccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCC
Confidence 55654 567888888887753222 456999999999999999999998888899999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..+...++..|++++.++.+++ +|.+|++++++.+++ ++++|++++||||||.++|.++
T Consensus 120 gd----~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~-----~~~~v~~~~p~NPtG~~~~~~~ 189 (394)
T PRK06836 120 GD----EVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITP-----KTKAVIINSPNNPTGVVYSEET 189 (394)
T ss_pred CC----EEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCc-----CceEEEEeCCCCCCCcCCCHHH
Confidence 88 9999999999999999999999999998765 478999999999976 7999999999999999999999
Q ss_pred HHHHHHHHHH------CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 180 IQDIIKFAHR------EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 180 l~~l~~ia~~------~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
+++|+++|++ ||++||+||+|.++.+++. ...++.+. ..++++++||||.+ |+||+|+||++
T Consensus 190 ~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~---------~~~~i~~~S~SK~~-~~pGlRiG~~~- 257 (394)
T PRK06836 190 LKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA-EVPYIFKY---------YDNSIVVYSFSKSL-SLPGERIGYIA- 257 (394)
T ss_pred HHHHHHHHHHhhhccCCCeEEEEeccccccccCCC-CCCChHHc---------cCcEEEEecchhhc-cCcceeeEEEe-
Confidence 9999999999 8999999999999987642 23333221 12499999999999 79999999998
Q ss_pred ecCCHHHHHH---HHH---hhh--cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCC
Q psy13922 254 INLDPGVKAM---LHK---SIS--AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQP 325 (509)
Q Consensus 254 ~~~~~~~~~~---l~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 325 (509)
.++.+.+. +.. ... ...+.+.+ .|.++..++..
T Consensus 258 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~~--- 298 (394)
T PRK06836 258 --VNPEMEDADDLVAALVFANRILGFVNAPAL----------------------------------MQRVVAKCLDA--- 298 (394)
T ss_pred --cCHHHhhhHHHHHHHHHHhhccccccCCHH----------------------------------HHHHHHHHhCC---
Confidence 56665432 111 111 11244444 55565555541
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhc
Q psy13922 326 GEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERT 405 (509)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~ 405 (509)
. ..++.++++++.+.+.|+++ |+.+.++.+|+|+|++++. .++.+++ ..|.++
T Consensus 299 ------~------~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~-------------~~~~~~~-~~l~~~ 351 (394)
T PRK06836 299 ------T------VDVSIYKRNRDLLYDGLTEL-GFECVKPQGAFYLFPKSPE-------------EDDVAFC-EKAKKH 351 (394)
T ss_pred ------h------HHHHHHHHHHHHHHHHHHhC-CCEeecCCceEEEEEeCCC-------------CCHHHHH-HHHHhC
Confidence 0 12456778889999999988 8888899999999976641 1344444 667788
Q ss_pred CeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeec
Q psy13922 406 GICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILP 485 (509)
Q Consensus 406 gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~ 485 (509)
||.++||..|+. ++ ++||+++.
T Consensus 352 gv~v~~g~~f~~------------------------------------------------~~----------~iRi~~~~ 373 (394)
T PRK06836 352 NLLLVPGSGFGC------------------------------------------------PG----------YFRLSYCV 373 (394)
T ss_pred CEEEECchhcCC------------------------------------------------CC----------eEEEEecC
Confidence 999999988865 44 89999999
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q psy13922 486 QPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 486 ~~~~i~~~~~~l~~~~~~~ 504 (509)
+++++++++++|++++++|
T Consensus 374 ~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 374 DTETIERSLPAFEKLAKEY 392 (394)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999755
No 64
>KOG0256|consensus
Probab=100.00 E-value=1.1e-41 Score=331.39 Aligned_cols=347 Identities=20% Similarity=0.361 Sum_probs=287.5
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcC--CCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDG--QPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA 122 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~ 122 (509)
....|.+-.|++.+|+++|+++..-.| +..+|+++++|+|+|.+.+.+.-.|++||| .-++|.|.|.++..-++
T Consensus 113 ~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgd----afLvPtPyY~gfdrdl~ 188 (471)
T KOG0256|consen 113 ELAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGD----AFLVPTPYYPGFDRDLR 188 (471)
T ss_pred hHhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCc----eeeecCCCCCcccccce
Confidence 345588888999999999999987665 347899999999999999999999999999 99999999999987665
Q ss_pred -hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 123 -EFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 123 -~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
+.|+++++|.+..+++|.++++.||+++.+.++. -+++.++|+||+||.|++++++++..++++|.++|+++|+||+|
T Consensus 189 ~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIy 268 (471)
T KOG0256|consen 189 WRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIY 268 (471)
T ss_pred eccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhh
Confidence 4599999999999999999999999999987765 68999999999999999999999999999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALV 280 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (509)
+.-+|+.. .+.|+.++..+..-+ ...+.+++|+||.+ |+||+|+|.+. +-++.+.....+..+ +...++.
T Consensus 269 a~sVF~~~-~F~Sv~ev~~~~~~~--~~rvHivyslSKD~-GlpGfRvGviY--S~ne~VvsaA~kmss-f~~vSs~--- 338 (471)
T KOG0256|consen 269 AGSVFDKS-EFRSVLEVRKDPHLD--PDRVHIVYSLSKDF-GLPGFRVGVIY--SNNEDVVSAATKMSS-FGLVSSQ--- 338 (471)
T ss_pred cccccCcc-CceEHHHHhhccccC--CCcEEEEEEecccc-CCCceEEEEEE--ecChHHHHHHHHHhh-ccCCcHH---
Confidence 99999854 899999987765422 34588889999999 99999999996 478888888888776 5566666
Q ss_pred ccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy13922 281 SLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEG 360 (509)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 360 (509)
.|..+..++.+ +...+++ +++.+++++.+..++.+.|+.+ |
T Consensus 339 -------------------------------tQ~~la~LLSD----~~f~~~y---l~en~~Rl~~rh~~~~~gLk~l-g 379 (471)
T KOG0256|consen 339 -------------------------------TQYLLASLLSD----EEFTREY---LRENNKRLRIRHRYIVEGLKAL-G 379 (471)
T ss_pred -------------------------------HHHHHHHHhch----HHHHHHH---HHHHHHHHHHHHHHHHhhHHhc-C
Confidence 55555666552 1111223 7889999999999999999999 9
Q ss_pred CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHH
Q psy13922 361 MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAK 440 (509)
Q Consensus 361 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~ 440 (509)
|.+.++.+|.|+|++++.-- .......+-+++.+++.+.++-+.||..|.+.
T Consensus 380 I~cl~s~AGlF~wvDlr~lL------~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~---------------------- 431 (471)
T KOG0256|consen 380 IPCLKSNAGLFCWVDLRKLL------TSLTFEGELELWERILDNVKLNLSPGSSCHCH---------------------- 431 (471)
T ss_pred CceeecCCeeEEEEEhHHhc------CcCChHHHHHHHHHHHHhhccccCCCCcceec----------------------
Confidence 99999999999999986110 01112234455678888889999999998872
Q ss_pred HhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHH-HHHHHHHHHHHHHHHh
Q psy13922 441 AKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKL-KAMLEKFREFHEEFLA 506 (509)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i-~~~~~~l~~~~~~~~~ 506 (509)
.|| |||++|++..++. +-+++||++++..+.+
T Consensus 432 ------------------------EpG----------WFRvcFAn~~~~t~~~am~Ri~~~~~~~~~ 464 (471)
T KOG0256|consen 432 ------------------------EPG----------WFRVCFANMSEETLEVAMRRLKQFLDSQVQ 464 (471)
T ss_pred ------------------------CCC----------eEEEEeccCCHHHHHHHHHHHHHHHHhhhc
Confidence 267 9999999555554 4499999999986654
No 65
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-41 Score=353.31 Aligned_cols=342 Identities=14% Similarity=0.190 Sum_probs=262.1
Q ss_pred CHHHHHHHHHHHhccc-CCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEE--EeCCHHHHHHHHHH---HhhcCC
Q psy13922 27 PDDVKQRAQAVLDGCR-GQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI--LSAGASDGIKSVLK---LLIEDV 100 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~-~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~--~t~G~~~al~~~~~---~l~~~g 100 (509)
|..+.+.+.+++.+.. .....+|+++.|.+++|+++++++.+..+..+++++|+ .|.|+++++..++. .++++|
T Consensus 45 ~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~G 124 (404)
T PTZ00376 45 KPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAG 124 (404)
T ss_pred CEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCC
Confidence 3345555655553321 24446699999999999999999976666667889998 48999999988875 567888
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
| +|++++|+|..|...++..|++++.+++.++.+|++|++.+++.++... ++.+++++++||||||.++|.+++
T Consensus 125 d----~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~--~~~~~~~~~~p~NPTG~~~s~~~~ 198 (404)
T PTZ00376 125 T----TVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAP--NGSVVLLHACAHNPTGVDPTEEQW 198 (404)
T ss_pred C----EEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHH
Confidence 8 9999999999999999999999999999654568999999999987421 145667779999999999999999
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCC-CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEG-SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
++|+++|++|+++||+||+|.+|.+++. ..+.++..+... ..++|+++||||.| |++|+|+||++++.++++
T Consensus 199 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~------~~~vi~i~SfSK~~-~~~GlRvG~~~~~~~~~~ 271 (404)
T PTZ00376 199 KEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAER------GVEFLVAQSFSKNM-GLYGERIGALHIVCANKE 271 (404)
T ss_pred HHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhc------CCcEEEEEeCCCcc-cccccccceEEEEeCCHH
Confidence 9999999999999999999999988531 112233333211 23599999999999 799999999843237887
Q ss_pred HHHHH----HHhh-hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch-HHH
Q psy13922 260 VKAML----HKSI-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY-EQF 333 (509)
Q Consensus 260 ~~~~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~-~~~ 333 (509)
+++.+ .+.. ..+.+++.+ .|.++..+++ ++.| +.+
T Consensus 272 ~~~~l~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~-----~~~~~~~~ 312 (404)
T PTZ00376 272 EAANVLSQLKLIIRPMYSSPPIH----------------------------------GARIADRILS-----DPELRAEW 312 (404)
T ss_pred HHHHHHHHHHHHHhhhcCCCchH----------------------------------HHHHHHHHhC-----CHHHHHHH
Confidence 66544 3322 234455666 5555555554 2222 445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 334 SREKQSVLDSLKQRAKMVADTFNSIE---GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 334 ~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
.++++++++.++++++.+.+.|+++. ++.+..++||||+|+++. .+++..+++++||.+.
T Consensus 313 ~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~-----------------~~~~~~L~~~~~v~v~ 375 (404)
T PTZ00376 313 LSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT-----------------KEQVERLIEKYHIYLL 375 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC-----------------HHHHHHHHHhCCEeec
Confidence 56678888999999999999999872 255667899999997553 3457788888899997
Q ss_pred cCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHH
Q psy13922 411 PGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEK 489 (509)
Q Consensus 411 pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~ 489 (509)
| + . |++++ .++++
T Consensus 376 p-------------------------------------------------------~----------~-Ris~~~~~~~~ 389 (404)
T PTZ00376 376 D-------------------------------------------------------N----------G-RISVAGLTSKN 389 (404)
T ss_pred C-------------------------------------------------------C----------C-eEEEeccCHHh
Confidence 4 3 2 89997 89999
Q ss_pred HHHHHHHHHHHHHH
Q psy13922 490 LKAMLEKFREFHEE 503 (509)
Q Consensus 490 i~~~~~~l~~~~~~ 503 (509)
+++++++|++++..
T Consensus 390 ~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 390 VDYVAEAIHDVVRN 403 (404)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998753
No 66
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=4.2e-41 Score=350.36 Aligned_cols=338 Identities=19% Similarity=0.257 Sum_probs=259.1
Q ss_pred CCCC--CCHHHHHHHHHHHhcccC-CCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPR--FPDDVKQRAQAVLDGCRG-QSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~--~p~~v~~a~~~~l~~~~~-~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.|. .|+.+.+++.+.+.+... .....|+|..|.++||+++|+++.+. .+++++|++|+|+++++..++ .++.
T Consensus 41 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~Ga~~al~~l~-~l~~ 116 (402)
T TIGR03542 41 GDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDGAKCDVFRLQ-SLFG 116 (402)
T ss_pred CCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCCcHHHHHHHH-HhcC
Confidence 5555 467889999988876321 23345989999999999999986432 378899999999999999875 5557
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCC-----------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNM-----------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINP 167 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~-----------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p 167 (509)
+|| .|+++.|+|..|...++..|+ +++.++.+++.+|.+|++. .. ++++|++++|
T Consensus 117 ~gd----~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~-----~~~~i~l~nP 182 (402)
T TIGR03542 117 SDN----TVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EP-----KIDIIYLCSP 182 (402)
T ss_pred CCC----EEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cC-----CceEEEEeCC
Confidence 887 999999999999999999999 9999998766566666422 12 6899999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe
Q psy13922 168 GNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR 247 (509)
Q Consensus 168 ~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr 247 (509)
|||||.++|.+++++|+++|+++|++||+||+|.+|.+++. ...++..+.. . ..++|+++||||.| |+||+|
T Consensus 183 ~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~-~~~~~~~~~~----~--~~~vi~~~SfSK~~-g~pGlR 254 (402)
T TIGR03542 183 NNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS-LPHSIFEIPG----A--KECAIEFRSFSKTA-GFTGVR 254 (402)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC-CCcchhhCCC----C--cccEEEEecCcccc-CCCCcc
Confidence 99999999999999999999999999999999999987542 2233333211 0 13589999999999 799999
Q ss_pred eEEEeeecCCHHHH--------HHHHHhh-hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhc
Q psy13922 248 GGYSEVINLDPGVK--------AMLHKSI-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDC 318 (509)
Q Consensus 248 ~G~v~~~~~~~~~~--------~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 318 (509)
+||++ ++++++ ..+.... ....+++.+ .|.++..
T Consensus 255 iG~~i---~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~----------------------------------~q~~~~~ 297 (402)
T TIGR03542 255 LGWTV---VPKELTYADGHSVIQDWERRQCTKFNGASYP----------------------------------VQRAAEA 297 (402)
T ss_pred eEEEE---ecHHHhhcchhhHHHHHHHHhhhcccCCCHH----------------------------------HHHHHHH
Confidence 99998 677776 2222211 233345666 5555444
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHH
Q psy13922 319 VVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYA 398 (509)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 398 (509)
++. ++.+ .+..+.++.++++++.+.+.|++. ++++.++.+++|+|++++. + .++.+++
T Consensus 298 ~l~-----~~~~----~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~v~l~~-----------~-~~~~~l~ 355 (402)
T TIGR03542 298 AYA-----GEGL----QPILEAISYYMENARILRKALEAA-GFKVYGGEHAPYLWVKTPE-----------G-ISSWDFF 355 (402)
T ss_pred HHc-----Ccch----hHHHHHHHHHHHHHHHHHHHHHhc-CceecCCCceeEEEEECCC-----------C-CCHHHHH
Confidence 443 1112 235567788999999999999987 7888888899999987751 1 1345667
Q ss_pred HHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCcee
Q psy13922 399 FELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYH 478 (509)
Q Consensus 399 ~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (509)
..+++++||.++||+.|+. .+.+ |
T Consensus 356 ~~l~~~~gv~v~pg~~f~~------------------------------------------------~~~~--------~ 379 (402)
T TIGR03542 356 DFLLYQYHVVGTPGSGFGP------------------------------------------------SGEG--------F 379 (402)
T ss_pred HHHHHhCCEEEeCchhhCC------------------------------------------------CCCC--------E
Confidence 7788889999999998865 3333 9
Q ss_pred EEEEeecChHHHHHHHHHHHHH
Q psy13922 479 FRTTILPQPEKLKAMLEKFREF 500 (509)
Q Consensus 479 ~Rls~~~~~~~i~~~~~~l~~~ 500 (509)
+||+++.+++++++++++|+++
T Consensus 380 iRis~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 380 VRFSAFGKRENIVEACERIKEA 401 (402)
T ss_pred EEEEecCCHHHHHHHHHHHHhh
Confidence 9999988999999999999875
No 67
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=2.3e-40 Score=367.96 Aligned_cols=365 Identities=17% Similarity=0.202 Sum_probs=274.5
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-CcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~ 98 (509)
|.|++ |+.+++++.+.+.. .. | ..|.+++|+++++++.+++|++.++ ++|++|+|+++++..+++++++
T Consensus 705 nE~d~ppPp~V~eAi~eal~~---~~---~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~ 776 (1082)
T PLN02672 705 DESFLPVPSAVKASIFESFVR---QN---I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQ 776 (1082)
T ss_pred CCCCCCCCHHHHHHHHHHHhh---cC---C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcC
Confidence 67776 67899998887765 21 2 2345778999999999999988765 5899999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC-CCCCCCCCH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG-NPTGQVLTK 177 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~-NPtG~~~s~ 177 (509)
+|| .|+++.|+|..|...++..|++++.+|++++.+|.+|++.|+++++.. +.++|++++|| ||||.+++.
T Consensus 777 pGD----~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~----~~~~I~L~nPnhNPTG~v~S~ 848 (1082)
T PLN02672 777 EGG----TLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV----KKPWVYISGPTINPTGLLYSN 848 (1082)
T ss_pred CCC----EEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC----CCCEEEEECcCCCCcCccCCH
Confidence 998 999999999999999999999999999987678999999999998652 34688999997 999999999
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCC-ccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGS-KFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
+++++|+++|++||++||+||+|.++.|++.. ...++.+.........+..+|++++||||.| |++|+|+||++. .
T Consensus 849 eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf-~lpGLRIGylIa--p 925 (1082)
T PLN02672 849 SEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTEL-LSGGHEFGFLAL--N 925 (1082)
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhh-ccHHHHheeEEe--C
Confidence 99999999999999999999999999886431 1112222222211110123699999999999 799999999982 3
Q ss_pred CHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 257 DPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 257 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
++++++.+.+... ...+... .|. ++.++..++... + ..|.++
T Consensus 926 ~~eLi~~l~~~~~-~s~~~~~------------------~q~-------------Aaaaalall~~~---~---~~~~~~ 967 (1082)
T PLN02672 926 DSVLIDAFHSAPG-LSRPHST------------------LKY-------------TIKKLLGLKNQK---S---SDLLDG 967 (1082)
T ss_pred CHHHHHHHHHhhh-hcCCCcH------------------HHH-------------HHHHHHHHHhcc---C---cHHHHH
Confidence 5669999987543 1122111 011 111111111100 1 224455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhh----cCC-CCcHHHHHHHHhhcCeEEec
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKA----EGK-CPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~g~-~~~~~~~~~ll~~~gI~v~p 411 (509)
+.+.++.++++++++.+.|++. |+.+.+|+||||+|+++.-..+....... .++ .++..++..+++++||.+.|
T Consensus 968 l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~P 1046 (1082)
T PLN02672 968 VAEQKKILKSRAERLKETLEAC-GWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINS 1046 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEec
Confidence 8888999999999999999998 89999999999999876310000000000 011 24667788888889999999
Q ss_pred CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHH
Q psy13922 412 GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLK 491 (509)
Q Consensus 412 g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~ 491 (509)
|.+|+. ++ ||||+++.++++++
T Consensus 1047 Gs~FG~------------------------------------------------~g----------~~RIsfa~~~e~Le 1068 (1082)
T PLN02672 1047 SSWTGI------------------------------------------------PG----------YCRFSFALEDSEFD 1068 (1082)
T ss_pred CcccCC------------------------------------------------CC----------eEEEEecCCHHHHH
Confidence 987765 44 99999999999999
Q ss_pred HHHHHHHHHHH
Q psy13922 492 AMLEKFREFHE 502 (509)
Q Consensus 492 ~~~~~l~~~~~ 502 (509)
+++++|+++.+
T Consensus 1069 eALerL~kf~~ 1079 (1082)
T PLN02672 1069 RALKAIARFKE 1079 (1082)
T ss_pred HHHHHHHHHHH
Confidence 99999999765
No 68
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=4.2e-41 Score=345.69 Aligned_cols=325 Identities=27% Similarity=0.457 Sum_probs=269.2
Q ss_pred CCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHh-hcCCCCCCCeEEEcCCCChhHHHHH
Q psy13922 44 QSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLL-IEDVDGKKPGVLIPIPQYPLYSASL 121 (509)
Q Consensus 44 ~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~p~y~~~~~~~ 121 (509)
.....|++..|.+++|+++++++++.+|+.++++ +|++|+|+.+++..++..+ .++++ +|+++.|+|..+...+
T Consensus 35 ~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~----~vlv~~P~y~~~~~~~ 110 (363)
T PF00155_consen 35 SSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGD----TVLVPDPCYPSYIEAA 110 (363)
T ss_dssp TGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTS----EEEEEESSSTHHHHHH
T ss_pred cccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccc----cceecCCccccccccc
Confidence 4566699999999999999999998889899999 9999999999999999999 67888 9999999999999999
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccC-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHC-NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~-~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
+..|.+++.++++.+.+|.+|++.|++.+++...+. +++++++++||||||.+++.+++++|+++|+++|++||+||+|
T Consensus 111 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y 190 (363)
T PF00155_consen 111 RLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAY 190 (363)
T ss_dssp HHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETT
T ss_pred cccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeece
Confidence 999999999998877788999999999999854432 4789999999999999999999999999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALV 280 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (509)
.++.++.. .+.+.. ..+.. ..++|+++|+||.| |++|+|+||++ .++++++.+......+.. +..
T Consensus 191 ~~~~~~~~-~~~~~~---~~~~~---~~~vi~~~S~SK~~-g~~GlRvG~i~---~~~~~~~~l~~~~~~~~~-~~~--- 255 (363)
T PF00155_consen 191 SDLIFGDP-DFGPIR---SLLDE---DDNVIVVGSLSKSF-GLPGLRVGYIV---APPELIERLRRFQRSGLS-SSP--- 255 (363)
T ss_dssp TTGBSSSS-HTHHHH---GHHTT---TSTEEEEEESTTTT-TSGGGTEEEEE---EEHHHHHHHHHHHHHTTS-SHH---
T ss_pred eccccCCC-ccCccc---ccccc---cccceeeeeccccc-ccccccccccc---chhhhhhhhhhccccccc-cch---
Confidence 99988642 222211 11211 23499999999999 89999999998 699999999988775544 555
Q ss_pred ccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy13922 281 SLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEG 360 (509)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 360 (509)
.+.++..++.. .....++.+++++.++++++.+.+.|+++ +
T Consensus 256 -------------------------------~~~~~~~~l~~-------~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~ 296 (363)
T PF00155_consen 256 -------------------------------MQAAAAAALSD-------PELVEKWLEELRERLRENRDLLREALEEI-G 296 (363)
T ss_dssp -------------------------------HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred -------------------------------hhHHHHHhhhc-------ccccccccccchhhHHHHHHHHHHHHHHh-h
Confidence 34444333320 12223478999999999999999999999 9
Q ss_pred CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHH
Q psy13922 361 MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAK 440 (509)
Q Consensus 361 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~ 440 (509)
+.+.++++++|+|+.+... ++.++.++++++.||.++||..|+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~-------------~~~~l~~~L~~~~gi~v~pg~~~~~----------------------- 340 (363)
T PF00155_consen 297 ITVLPPEAGFFLWVRLDPN-------------DAEELAQELLEEYGILVRPGSYFGV----------------------- 340 (363)
T ss_dssp SEEEHHSBSSEEEEEESHH-------------HHHHHHHHHHHHHTEEEEEGGGGTS-----------------------
T ss_pred hheeeccCccEEEEEcccc-------------hHHHHHHHHHHhCCEEEEecCCCCC-----------------------
Confidence 9999888999999777611 2456677888888999999998877
Q ss_pred HhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe-ecChHHHHHHHHHH
Q psy13922 441 AKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI-LPQPEKLKAMLEKF 497 (509)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~-~~~~~~i~~~~~~l 497 (509)
++ +||+++ ..+++++++++++|
T Consensus 341 -------------------------~~----------~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 341 -------------------------PG----------YIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp -------------------------TT----------EEEEEGGCSCHHHHHHHHHHH
T ss_pred -------------------------CC----------EEEEEeccCCHHHHHHHHhhC
Confidence 44 999999 59999999999986
No 69
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=8.3e-40 Score=342.32 Aligned_cols=361 Identities=20% Similarity=0.266 Sum_probs=260.1
Q ss_pred CCCCC-C---HHHHHHHHHHHhccc-CCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDPRF-P---DDVKQRAQAVLDGCR-GQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~~~-p---~~v~~a~~~~l~~~~-~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
|.|.. | +.+.+++...+.+.. .....+|++..|.++||+++++++++++|+++++++|++|+|+++++.++++++
T Consensus 38 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l 117 (416)
T PRK09440 38 GNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLF 117 (416)
T ss_pred CCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHH
Confidence 55553 3 245566666655421 123456999999999999999999999999999999999999999999999999
Q ss_pred hcCC-CCCCCeEEE-cCCCChhHHHHHHhcCC----EEEEEecCCC-CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 97 IEDV-DGKKPGVLI-PIPQYPLYSASLAEFNM----EQIGYYLDES-KQWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 97 ~~~g-d~~~~~Vlv-~~p~y~~~~~~~~~~g~----~~~~v~~~~~-~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
+.++ ++.++.|++ ..|+|..|...+...+. ....++++.+ .+|.+|++.|+ +.. +++++++++|||
T Consensus 118 ~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~-----~~~~i~l~~P~N 190 (416)
T PRK09440 118 AGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE-----DTGAICVSRPTN 190 (416)
T ss_pred hccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC-----CceEEEEecCCC
Confidence 8631 111239999 69999999886654442 1122233222 24789999987 333 689999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeE
Q psy13922 170 PTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGG 249 (509)
Q Consensus 170 PtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G 249 (509)
|||.++|.+++++|+++|+++|++||+||+|.++... ..+.+..+.. ..++|+++||||. |+||+|+|
T Consensus 191 PTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-----~~~~~~~~~~-----~~~vI~~~SfSK~--~~pGlRiG 258 (416)
T PRK09440 191 PTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-----IIFSEATPLW-----NPNIILCMSLSKL--GLPGVRCG 258 (416)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-----cchhhcCccc-----cCCeEEEeccccc--CCCcceEE
Confidence 9999999999999999999999999999999764321 1111111110 2359999999995 58999999
Q ss_pred EEeeecCCHHHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC
Q psy13922 250 YSEVINLDPGVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 250 ~v~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 328 (509)
|++ +++++++.+...... ..+++.+ .|.++..+++ ++
T Consensus 259 ~~i---~~~~l~~~~~~~~~~~~~~~s~~----------------------------------~q~~~~~~l~-----~~ 296 (416)
T PRK09440 259 IVI---ADEEIIEALSNMNGIISLAPGRL----------------------------------GPAIAAEMIE-----SG 296 (416)
T ss_pred EEe---CCHHHHHHHHHHHHHhccCCCcH----------------------------------HHHHHHHHhc-----cc
Confidence 998 899999999887663 3456666 6666666665 23
Q ss_pred chHHHHHHHHH-HHHHHHHHHHHHHHHHhcC-C--CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhh
Q psy13922 329 SYEQFSREKQS-VLDSLKQRAKMVADTFNSI-E--GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLER 404 (509)
Q Consensus 329 ~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~ 404 (509)
.|.++ ..+ +++.++++++.+.+.|.+. + ++.+..|+||+|+|++++- .++ ++.++. ..+.+
T Consensus 297 ~~~~~---~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~----------~~~-~~~~~~-~~l~~ 361 (416)
T PRK09440 297 DLLRL---SETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKD----------LPI-TTEELY-QRLKA 361 (416)
T ss_pred hHHHH---HHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCC----------CCC-CHHHHH-HHHHH
Confidence 34333 333 6777888888888888763 3 3566789999999987751 011 344444 45678
Q ss_pred cCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee
Q psy13922 405 TGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL 484 (509)
Q Consensus 405 ~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~ 484 (509)
+||.++||+.|+.. .+.. ..++..+|||+++
T Consensus 362 ~gV~v~pg~~F~~~-----------------------------------------------~~~~--~~~~~~~iRis~~ 392 (416)
T PRK09440 362 RGVLVVPGHYFFPG-----------------------------------------------LDED--WPHAHQCIRMNYV 392 (416)
T ss_pred CCEEEechHhhCCC-----------------------------------------------Cccc--cCCcCceEEEEec
Confidence 89999999988641 0000 0011238999999
Q ss_pred cChHHHHHHHHHHHHHHHHHHhh
Q psy13922 485 PQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
.+.+++++++++|++++++.+++
T Consensus 393 ~~~~~l~~~i~~l~~~~~~~~~~ 415 (416)
T PRK09440 393 QDDEEIEKGIAILAEEVEKAYAE 415 (416)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhc
Confidence 88999999999999999887764
No 70
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=3.7e-40 Score=338.99 Aligned_cols=324 Identities=21% Similarity=0.318 Sum_probs=255.7
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCC-CCCCcEEEeCCHHHHHHHHHHHh-h
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQP-ADWQDVILSAGASDGIKSVLKLL-I 97 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~-~~~~~i~~t~G~~~al~~~~~~l-~ 97 (509)
+.|.+ |+.+.+++.+.... .+|+++.|.+++|+++++++.+++|++ +++++|++|+|+++++..++..+ +
T Consensus 35 ~~p~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~ 108 (364)
T PRK07865 35 GTPVDPVPPVIQEALAAAADA------PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGL 108 (364)
T ss_pred CCCCCCCCHHHHHHHHHHHhh------CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcC
Confidence 55544 56777777665432 259999999999999999999999987 89999999999999999988888 6
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
++|| .|+++.|+|..+...++..|++++.++. ++.++. . ++++|++++||||||.+++.
T Consensus 109 ~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~~~l~~---~-----~~~~v~~~~p~NPtG~~~~~ 167 (364)
T PRK07865 109 GPGD----VVVIPELAYPTYEVGARLAGATVVRADS---------LTELGP---Q-----RPALIWLNSPSNPTGRVLGV 167 (364)
T ss_pred CCCC----EEEECCCCcccHHHHHHhcCCEEEecCC---------hhhCCc---c-----cceEEEEcCCCCCCCccCCH
Confidence 8888 9999999999999999999999988741 233322 2 68999999999999999999
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++++|+++|+++|++||+||+|.++.+++ ...+. +.++... ....++|+++||||.| |++|+|+||++ ++
T Consensus 168 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~--~~~~~~~-~~~~~~i~~~S~SK~~-~~~GlRiG~i~---~~ 238 (364)
T PRK07865 168 DHLRKVVAWARERGAVVASDECYLELGWDA--EPVSI--LDPRVCG-GDHTGLLAVHSLSKQS-NLAGYRAGFVA---GD 238 (364)
T ss_pred HHHHHHHHHHHHcCCEEEEecchhhhccCC--CCCcc--ccccccC-CccceEEEEeechhcc-CCCceeeEEEe---cC
Confidence 999999999999999999999999988754 12221 1111100 0134699999999999 79999999998 89
Q ss_pred HHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 258 PGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 258 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
+++++.+..... ...+++.+ .|.++..++.. . ++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~~--------~---~~ 273 (364)
T PRK07865 239 PALVAELLEVRKHAGMMVPAP----------------------------------VQAAMVAALGD--------D---AH 273 (364)
T ss_pred HHHHHHHHHHHHhcCCCcCHH----------------------------------HHHHHHHHhCC--------H---HH
Confidence 999999987654 33456666 55555555441 2 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
.++.++.++++++.+.+.|++. |+.+..+++++|+|+++.. +... ..+.|.++||.+.||..|+
T Consensus 274 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--------------~~~~-~~~~l~~~gv~v~pg~~f~ 337 (364)
T PRK07865 274 VREQRERYARRRAVLRPALEAA-GFRVDHSEAGLYLWATRGE--------------DCWD-TVAWLAERGILVAPGDFYG 337 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccEEEEEeCCC--------------CHHH-HHHHHHHCCEEEeCccccC
Confidence 6778889999999999999987 8888889999999976631 1233 3456778899999999876
Q ss_pred CCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHH
Q psy13922 417 QVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEK 496 (509)
Q Consensus 417 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~ 496 (509)
. .+.+ ++||+++.+++++++++++
T Consensus 338 ~------------------------------------------------~~~~--------~iRi~~~~~~~~~~~~~~~ 361 (364)
T PRK07865 338 P------------------------------------------------AGAQ--------HVRVALTATDERIAAAVER 361 (364)
T ss_pred c------------------------------------------------CCCC--------EEEEEecCCHHHHHHHHHH
Confidence 5 2223 9999999889999999999
Q ss_pred HH
Q psy13922 497 FR 498 (509)
Q Consensus 497 l~ 498 (509)
|+
T Consensus 362 l~ 363 (364)
T PRK07865 362 LA 363 (364)
T ss_pred hh
Confidence 85
No 71
>PLN02397 aspartate transaminase
Probab=100.00 E-value=8e-40 Score=342.23 Aligned_cols=344 Identities=15% Similarity=0.176 Sum_probs=251.2
Q ss_pred CCCCCHHHHHHHHHHHhcc-cCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcE-----EEeCCHHHHHHHHHHHh
Q psy13922 23 DPRFPDDVKQRAQAVLDGC-RGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDV-----ILSAGASDGIKSVLKLL 96 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~-~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i-----~~t~G~~~al~~~~~~l 96 (509)
+|+.++.+.+.+.++.... ..+...+|+++.|.++||+++++++.+..+...+.++| +.++|+.+ +...+..+
T Consensus 60 ~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~ 138 (423)
T PLN02397 60 TEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLR-LGAEFLAR 138 (423)
T ss_pred CCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHH-HHHHHHHH
Confidence 3333444455555543221 22444469999999999999999996654433333343 33444433 33444445
Q ss_pred hcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 97 IEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
+.+|| +|++++|+|..|...++..|++++.+++.+..+|++|++.+++.+.+. .++++++++++||||||.+++
T Consensus 139 ~~pGd----~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~--~~~~~~i~~~~P~NPTG~v~s 212 (423)
T PLN02397 139 FYPGS----TIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAA--PDGSFVLLHACAHNPTGVDPT 212 (423)
T ss_pred hCCCC----EEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhC--CCCCEEEEeCCCCCCCCCCCC
Confidence 56888 999999999999999999999999999844335799999999888742 125778888999999999999
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCC-CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeec
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEG-SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN 255 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~ 255 (509)
.+++++|+++|++||++||+||+|.+|.+++. ..+.++..+... ..++|+++||||.| |++|+|+||++++.
T Consensus 213 ~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~------~~~vI~~~SfSK~~-~~~G~RvG~~v~~~ 285 (423)
T PLN02397 213 PEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVED------GHEILVAQSYAKNM-GLYGERVGALSVVC 285 (423)
T ss_pred HHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhc------CCcEEEEEECcccC-CCccccceEEEEEe
Confidence 99999999999999999999999999998531 122333333211 12499999999999 79999999985333
Q ss_pred CCHHHHHH----HHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 256 LDPGVKAM----LHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 256 ~~~~~~~~----l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
.++++++. +.+... .+.+++.+ .|.++..++. ++.|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~L~-----~~~~ 326 (423)
T PLN02397 286 KSADVAVRVKSQLKLIARPMYSNPPIH----------------------------------GASIVATILG-----DPEL 326 (423)
T ss_pred CCHHHHHHHHHHHHHHHhcccCCCcHH----------------------------------HHHHHHHHhC-----CHHH
Confidence 56665554 333332 34456666 4555544444 1112
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhc
Q psy13922 331 -EQFSREKQSVLDSLKQRAKMVADTFNSIEG----MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERT 405 (509)
Q Consensus 331 -~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~ 405 (509)
..+.++++++++.++++++.+.+.|+++ + +.+..|+||||+|++++ ++++..+++++
T Consensus 327 ~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l~-----------------~~~~~~Ll~~~ 388 (423)
T PLN02397 327 FSEWTKELKGMADRIISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGLN-----------------KEQVDRMTKEY 388 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCCC-----------------HHHHHHHHHhC
Confidence 2455568899999999999999999998 5 77778999999997653 23688999999
Q ss_pred CeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-
Q psy13922 406 GICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL- 484 (509)
Q Consensus 406 gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~- 484 (509)
||++.+ + - |++++
T Consensus 389 ~V~v~~-------------------------------------------------------~----------~-Ri~~~~ 402 (423)
T PLN02397 389 HIYMTR-------------------------------------------------------D----------G-RISMAG 402 (423)
T ss_pred CEEECC-------------------------------------------------------C----------C-eEEEee
Confidence 999862 2 2 89998
Q ss_pred cChHHHHHHHHHHHHHHHH
Q psy13922 485 PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~ 503 (509)
.+.+.|++++++|++++++
T Consensus 403 ~~~~~i~~~~~~i~~~~~~ 421 (423)
T PLN02397 403 LSSKNVPYLADAIHAVVTN 421 (423)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999863
No 72
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3.9e-40 Score=337.28 Aligned_cols=318 Identities=20% Similarity=0.307 Sum_probs=254.2
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+++++.+.+.. ..+|++. +.++||+++++++ ++++++|++|+|+++++..+++++ .+ +
T Consensus 33 ~p~~~~~a~~~~~~~-----~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~~~~~~~-~~-~---- 94 (354)
T PRK06358 33 VPESLKQAITENLDK-----LVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELIFNIVKVT-KP-K---- 94 (354)
T ss_pred CCHHHHHHHHHHHHh-----hhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHHHHHHHHh-CC-C----
Confidence 478888888887643 4458764 5789999999998 278999999999999999999987 33 4
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.|+++.|+|..|...++..|++++.++++++++|.+| +.+++.+.. +++++++++||||||.+++.+++++|++
T Consensus 95 ~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~ 168 (354)
T PRK06358 95 KVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKE-----EIDLVFLCNPNNPTGQLISKEEMKKILD 168 (354)
T ss_pred cEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhcc-----CCCEEEEeCCCCCCCCccCHHHHHHHHH
Confidence 8999999999999999999999999999877678899 666666654 6899999999999999999999999999
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
+|+++|++||+||+|.+|.+++. ..+....... ..++|+++||||.| |++|+|+||++. .++.+++.+.
T Consensus 169 ~a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~~~~------~~~vi~~~S~SK~~-gl~G~RiG~lv~--~~~~~~~~~~ 237 (354)
T PRK06358 169 KCEKRNIYLIIDEAFMDFLEENE--TISMINYLEN------FKNLIIIRAFTKFF-AIPGLRLGYGLT--SNKNLAEKLL 237 (354)
T ss_pred HHHhcCCEEEEeCcccccCCCcc--chhHHHhccC------CCCEEEEEechhhc-cCcchhheeeec--CCHHHHHHHH
Confidence 99999999999999999987642 2333222211 34699999999999 899999999972 3678888888
Q ss_pred HhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHH
Q psy13922 266 KSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLK 345 (509)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (509)
+... .++.+.+ .|.++..++++ . +++++.++.++
T Consensus 238 ~~~~-~~~~~~~----------------------------------~q~~~~~~l~~--------~---~~~~~~~~~~~ 271 (354)
T PRK06358 238 QMRE-PWSINTF----------------------------------ADLAGQTLLDD--------K---EYIKKTIQWIK 271 (354)
T ss_pred HhCC-CCcchHH----------------------------------HHHHHHHHhcc--------H---HHHHHHHHHHH
Confidence 7654 3455666 55555555441 1 23677888889
Q ss_pred HHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccc
Q psy13922 346 QRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFR 425 (509)
Q Consensus 346 ~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r 425 (509)
++++.+.+.|++++++.+.++.|+ |+|++++ +..++...+ .++||.++||+.|+. .+.++||
T Consensus 272 ~~r~~l~~~L~~~~~~~~~~~~g~-f~~~~~~---------------~~~~~~~~l-~~~gI~v~~~~~f~~-~~~~~iR 333 (354)
T PRK06358 272 EEKDFLYNGLSEFKGIKVYKPSVN-FIFFKLE---------------KPIDLRKEL-LKKGILIRSCSNYRG-LDENYYR 333 (354)
T ss_pred HHHHHHHHHHhcCCCcEEcCCcce-EEEEEcC---------------chHHHHHHH-HHCCeEEEECCCCCC-CCCCEEE
Confidence 999999999999888888888766 7786664 124444444 467999999999954 2568999
Q ss_pred cchhhhhhhHHHHHHHh
Q psy13922 426 QQVWWRHYTQRAIAKAK 442 (509)
Q Consensus 426 ~~~~~~~~~~~~~~~~~ 442 (509)
++++.+.++++++++..
T Consensus 334 ls~~~~~~~~~l~~~l~ 350 (354)
T PRK06358 334 VAVKSREDNKKLLKALE 350 (354)
T ss_pred EEeCCHHHHHHHHHHHH
Confidence 99999999999999864
No 73
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-39 Score=335.51 Aligned_cols=332 Identities=16% Similarity=0.280 Sum_probs=252.0
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhc--CCCCCCCcEEEeCCHHHHHHHHHHHhh
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRD--GQPADWQDVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~--g~~~~~~~i~~t~G~~~al~~~~~~l~ 97 (509)
|.|++ |+.+++++.+.+.. ....++|++ .|.++||+++++++++++ |+.+++++|++|+|+++++..++.+++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~ 112 (374)
T PRK02610 36 NEFPYDLPPDLKQKLAWLYQQ--GIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATC 112 (374)
T ss_pred CCCCCCCCHHHHHHHHHHHhh--cccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHc
Confidence 44554 67899999887765 112345864 699999999999998876 567899999999999999998888887
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
.+++ +.|+++.|+|..|...++..|++++.++.+++ +|++|++.|++.+++.. ..++++|++++||||||.+++.
T Consensus 113 ~~g~---~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~~~-~~~~k~i~l~~P~NPTG~~~s~ 187 (374)
T PRK02610 113 LGGE---GSILVAEPTFSMYGILAQTLGIPVVRVGRDPE-TFEIDLAAAQSAIEQTQ-NPPVRVVFVVHPNSPTGNPLTA 187 (374)
T ss_pred CCCC---CeEEEcCCChHHHHHHHHHcCCEEEEecCCcc-cCCCCHHHHHHHHHhhc-CCCceEEEEeCCCCCCCCCCCH
Confidence 7764 27999999999999999999999999998643 58999999999987410 0179999999999999999999
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++++|+++| +|++||+||+|.+|.+. ..+..+. + ..++|+++||||.| |+||+|+||++ ++
T Consensus 188 ~~l~~l~~~~--~~~~iI~De~Y~~~~~~-----~~~~~~~-~------~~~~ivi~SfSK~~-g~~GlRiG~~v---~~ 249 (374)
T PRK02610 188 AELEWLRSLP--EDILVVIDEAYFEFSQT-----TLVGELA-Q------HPNWVILRTFSKAF-RLAAHRVGYAI---GH 249 (374)
T ss_pred HHHHHHHhcc--CCcEEEEeccccccCcc-----chHHHHh-c------CCCEEEEEecchhc-cCcccceeeee---cC
Confidence 9999999876 49999999999998532 1122221 1 23488899999999 79999999998 89
Q ss_pred HHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 258 PGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 258 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
+++++.+.+... .++.+.+ .|.++..++.. ++.+ .
T Consensus 250 ~~l~~~l~~~~~-~~~~~~~----------------------------------~q~a~~~~l~~-------~~~~---~ 284 (374)
T PRK02610 250 PELIAVLEKVRL-PYNLPSF----------------------------------SQLAAQLALEH-------RQEL---L 284 (374)
T ss_pred HHHHHHHHHhcC-CCCCCHH----------------------------------HHHHHHHHhcC-------HHHH---H
Confidence 999999987664 3345555 45554444431 2223 4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+.+++.+++ ++.+.+.|+.++++.+. |.+++|+|++++. +. ++.++ ...|.++||.++++
T Consensus 285 ~~~~~~~~~-r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~-----------~~-~~~~~-~~~l~~~gi~v~~~----- 344 (374)
T PRK02610 285 AAIPEILQE-RDRLYQALQELPQLRVW-PSAANFLYLRLSQ-----------DA-ALAAL-HQALKAQGTLVRHT----- 344 (374)
T ss_pred HHHHHHHHH-HHHHHHHHHhCCCcEeC-CCcceEEEEeCCC-----------CC-CHHHH-HHHHHHCCEEEEeC-----
Confidence 444444444 67788888888777654 7788999977651 11 34444 45567889998742
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+ ++||+++. ++++++++++|
T Consensus 345 ------------------------------------------------~~----------~lRls~~~-~~~~~~~l~~l 365 (374)
T PRK02610 345 ------------------------------------------------GG----------GLRITIGT-PEENQRTLERL 365 (374)
T ss_pred ------------------------------------------------CC----------eEEEeCCC-HHHHHHHHHHH
Confidence 12 89999986 46789999999
Q ss_pred HHHHHH
Q psy13922 498 REFHEE 503 (509)
Q Consensus 498 ~~~~~~ 503 (509)
+++++.
T Consensus 366 ~~~l~~ 371 (374)
T PRK02610 366 QAALTQ 371 (374)
T ss_pred HHHHhh
Confidence 998764
No 74
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.4e-39 Score=333.61 Aligned_cols=324 Identities=22% Similarity=0.314 Sum_probs=254.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCC-CCCCcEEEeCCHHHHHHHHHHHh-h
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQP-ADWQDVILSAGASDGIKSVLKLL-I 97 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~-~~~~~i~~t~G~~~al~~~~~~l-~ 97 (509)
|+|.+ |+.+.+++.+... ...|+++.|.++||+++++++.+++|++ +++++|++|+|+++++..++..+ .
T Consensus 29 ~~p~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~ 102 (357)
T TIGR03539 29 GTPVDPVPPLIRAALAAAAD------APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGL 102 (357)
T ss_pred CCCCCCCCHHHHHHHHHHHh------hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcC
Confidence 55544 5677777765432 2359999999999999999999998987 99999999999999999999888 6
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
++|| .|+++.|+|..+...++..|++++.++ |++.+.. . ++++|++++|+||||.+++.
T Consensus 103 ~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~~---~-----~~~~v~~~~p~NPtG~~~~~ 161 (357)
T TIGR03539 103 GPGD----TVVIPELAYPTYEVGALLAGATPVAAD---------DPTELDP---V-----GPDLIWLNSPGNPTGRVLSV 161 (357)
T ss_pred CCCC----EEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcCc---c-----CccEEEEeCCCCCcCccCCH
Confidence 8888 999999999999999999999988774 2232221 2 68999999999999999999
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++++|+++|+++|++||+||+|.++.+++. ..+. +.+..... ...++|+++||||.| |++|+|+||++ ++
T Consensus 162 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~--~~~~~~~~-~~~~vi~~~S~SK~~-~~~G~R~G~~i---~~ 232 (357)
T TIGR03539 162 DELRAIVAWARERGAVVASDECYLELGWEGR--PVSI--LDPRVCGG-DHTGLLAVHSLSKRS-NLAGYRAGFVA---GD 232 (357)
T ss_pred HHHHHHHHHHHHcCeEEEEecchhhhccCCC--Cccc--eecccCCC-ccccEEEEecccccc-CCCceeEEEEe---cC
Confidence 9999999999999999999999999887542 1111 11110000 123589999999999 79999999998 78
Q ss_pred HHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 258 PGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 258 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
+++++.+.+.+. ...+++.+ .|.++..++.. . .+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~~--------~---~~ 267 (357)
T TIGR03539 233 PALVAELLTVRKHAGLMVPAP----------------------------------VQAAMVAALGD--------D---GH 267 (357)
T ss_pred HHHHHHHHHHHhhcccCCCHH----------------------------------HHHHHHHHcCC--------H---HH
Confidence 999999887664 34456666 55555555541 2 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
.++.+..++++++.+.+.|.+. |+.+.+|++|+|+|+++.. ++.. +...|.++||.+.||..|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~~~~~~~~~--------------~~~~-~~~~l~~~gV~v~pg~~f~ 331 (357)
T TIGR03539 268 VAEQKARYAARRAQLKPALEKA-GFRIDHSEAGLYLWATRGE--------------DAWD-TVDRLAELGILVAPGDFYG 331 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCccEEEEEECCC--------------CHHH-HHHHHHhCCEEECCccccC
Confidence 5677888999999999999987 8888889999999976631 2233 3456788899999999876
Q ss_pred CCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHH
Q psy13922 417 QVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEK 496 (509)
Q Consensus 417 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~ 496 (509)
. .+.+ +|||+++.++++|++++++
T Consensus 332 ~------------------------------------------------~~~~--------~iRis~~~~~~~i~~~~~~ 355 (357)
T TIGR03539 332 P------------------------------------------------AGSQ--------HVRVALTATDERIAAAVAR 355 (357)
T ss_pred C------------------------------------------------CCCC--------eEEEEecCCHHHHHHHHHh
Confidence 5 3333 9999999889999999988
Q ss_pred HH
Q psy13922 497 FR 498 (509)
Q Consensus 497 l~ 498 (509)
|+
T Consensus 356 l~ 357 (357)
T TIGR03539 356 LT 357 (357)
T ss_pred hC
Confidence 73
No 75
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=335.25 Aligned_cols=349 Identities=17% Similarity=0.243 Sum_probs=259.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCC---CCcEEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPAD---WQDVILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~---~~~i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
.+.+.+++.+++.+.......+|+++.|.++||+++++++.+..+ ... .++|++|+|+++++.+++..++++||
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd-- 94 (388)
T PRK08637 18 GPMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFVDQGD-- 94 (388)
T ss_pred CcchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHHHHHHHHhcCCCC--
Confidence 346677777776653334455699999999999999999876543 233 26899999999999999999999998
Q ss_pred CCeEEEcCCCChhHHHHHH-hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 104 KPGVLIPIPQYPLYSASLA-EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
.|+++.|+|..|...+. ..|.+++.+|+..+ ++++|++.+++.++.... ...+++++++||||||.+++.+++++
T Consensus 95 --~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~~-~~~~~~~~~~P~NPTG~~~s~~~~~~ 170 (388)
T PRK08637 95 --TVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAYN-KGKVIVILNFPNNPTGYTPTEKEATA 170 (388)
T ss_pred --EEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHHhhcc-CCCEEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999998765 58999999998422 247899999998872100 14455667899999999999999999
Q ss_pred HHHHHHH-----CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeec--
Q psy13922 183 IIKFAHR-----EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN-- 255 (509)
Q Consensus 183 l~~ia~~-----~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~-- 255 (509)
|+++|++ ++++||+||+|.+|.+++. ...++.....+. .++..+++++|+||.+ ++||+|+||+++..
T Consensus 171 l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~-~~~~~~~~~~~~---~~~vi~i~~~s~SK~~-~~pGlRlG~~~~~~~~ 245 (388)
T PRK08637 171 IVEAIKELADAGTKVVAVVDDAYFGLFYEDS-YKESLFAALANL---HSNILAVKLDGATKEE-FVWGFRVGFITFGTKA 245 (388)
T ss_pred HHHHHHHHHhcCCcEEEEecccchhcccCCc-cchhhHHHhhcc---cccceEEEeccccccC-CCcccceEEEEEcccc
Confidence 9999875 8999999999999988653 233332211111 1122245566999999 79999999998422
Q ss_pred -CCHHHHHHHHHhh-----hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCc
Q psy13922 256 -LDPGVKAMLHKSI-----SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPS 329 (509)
Q Consensus 256 -~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 329 (509)
.++++++.+.... ....++|.+ .|.++..+++ +
T Consensus 246 ~~~~~l~~~~~~~~~~~~~~~~~~~s~~----------------------------------~q~a~~~~l~-----~-- 284 (388)
T PRK08637 246 GSSQTVKEALEKKVKGLIRSNISNGPHP----------------------------------SQSAVLRALN-----S-- 284 (388)
T ss_pred CCcHHHHHHHHHHHHHHhhcccCCCCcH----------------------------------HHHHHHHHhC-----C--
Confidence 3578888876421 233466777 6666666655 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 330 YEQFSREKQSVLDSLKQRAKMVADTFNSI---EGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
..+.+++++.+..++++++.+.+.|+.. +++.+.+|++|+|+|++++ . . ++.+++..+++++|
T Consensus 285 -~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~--~----------~-~~~~l~~~l~~~~g 350 (388)
T PRK08637 285 -PEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLK--G----------V-DAEELRVHLLEKYG 350 (388)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCC--h----------H-HHHHHHHHHhhhcc
Confidence 2344457778888999999998888764 2577888999999997774 1 1 24566677778889
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-c
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-P 485 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~ 485 (509)
|.+.+. . .+ ++|++++ .
T Consensus 351 v~~~~~----~------------------------------------------------~~----------~iRi~~~~~ 368 (388)
T PRK08637 351 IGTIAL----N------------------------------------------------ET----------DLRIAFSCV 368 (388)
T ss_pred eEEEec----c------------------------------------------------CC----------ceEEEeecC
Confidence 988631 1 12 8999999 6
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q psy13922 486 QPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 486 ~~~~i~~~~~~l~~~~~~~ 504 (509)
+.+++++++++|+++++.+
T Consensus 369 ~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 369 EEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 8999999999999998754
No 76
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-38 Score=329.12 Aligned_cols=340 Identities=19% Similarity=0.259 Sum_probs=264.2
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.+.+ |+.+.+++.+++.. .....|+++.|.+++|+++++++ | +++++|++|+|+++++..++++++.+
T Consensus 36 ~~~~~~~~~~~~~a~~~~~~~---~~~~~y~~~~g~~~lr~~ia~~l----~--~~~~~v~~~~g~t~al~~~~~~~~~~ 106 (380)
T PRK06225 36 NTNHLGPHEEVREAMIRCIEE---GEYCKYPPPEGFPELRELILKDL----G--LDDDEALITAGATESLYLVMRAFLSP 106 (380)
T ss_pred CCCCCCCCHHHHHHHHHHHhc---CCCCCCCCCcchHHHHHHHHHhc----C--CCCCcEEEeCCHHHHHHHHHHHhcCC
Confidence 44444 57889999888876 44566999999999999999998 3 57789999999999999999999988
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC-CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD-ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
|| .|+++.|+|..+...++..|.+++.++++ ++++|.+|++.+++.+.+ ++++|++++|+||||.++|.+
T Consensus 107 gd----~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-----~~~~v~l~~p~NptG~~~~~~ 177 (380)
T PRK06225 107 GD----NAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE-----NTRLIYLIDPLNPLGSSYTEE 177 (380)
T ss_pred CC----EEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC-----CceEEEEeCCCCCCCcCCCHH
Confidence 88 99999999999999999999999999975 344678999999998876 789999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|+++|+||+|.+|..+ ..+...+. ..+++++.||||.+ |++|+|+||++ .++
T Consensus 178 ~~~~i~~~a~~~~~~ii~De~y~~~~~~----~~~~~~~~--------~~~~i~~~s~SK~~-g~~G~RiG~i~---~~~ 241 (380)
T PRK06225 178 EIKEFAEIARDNDAFLLHDCTYRDFARE----HTLAAEYA--------PEHTVTSYSFSKIF-GMAGLRIGAVV---ATP 241 (380)
T ss_pred HHHHHHHHHHHCCcEEEEehhHHHHhcc----CCchhhcC--------CCCEEEEeechhhc-CCccceeEEEe---cCH
Confidence 9999999999999999999999987542 11222211 12488899999999 89999999998 789
Q ss_pred HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 259 GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 259 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
++++.+........+.+.+ .+.+...++.. ..++.+
T Consensus 242 ~l~~~~~~~~~~~~~~~~~----------------------------------~~~~a~~~l~~----------~~~~~~ 277 (380)
T PRK06225 242 DLIEVVKSIVINDLGTNVI----------------------------------AQEAAIAGLKV----------KDEWID 277 (380)
T ss_pred HHHHHHHHHHhcccCCCHH----------------------------------HHHHHHHHHhc----------chHHHH
Confidence 9999988765434445555 34333333220 112356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCee-ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSC-NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++++.++++++.+.+.|++++++.+ ..+.++.|+|+++... ++ +..++. ..|.++||.++||..|+.
T Consensus 278 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~----------~~-~~~~l~-~~l~~~gi~v~~g~~~~~ 345 (380)
T PRK06225 278 RIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEA----------GI-DPEDLV-EYLLERKIFVRQGTYTSK 345 (380)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccc----------cC-CHHHHH-HHHHHCCEEEcCCcccCc
Confidence 6677788888889999988777543 2345666778776411 12 344444 444578999999976654
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
. .+.+ ++|++++.+++++++++++|
T Consensus 346 ~-----------------------------------------------~~~~--------~iR~s~~~~~e~l~~~~~~l 370 (380)
T PRK06225 346 R-----------------------------------------------FGDR--------YIRVSFSIPREQVEVFCEEF 370 (380)
T ss_pred C-----------------------------------------------CCCc--------eEEEEeCCCHHHHHHHHHHH
Confidence 1 2223 99999999899999999999
Q ss_pred HHHHHHHHh
Q psy13922 498 REFHEEFLA 506 (509)
Q Consensus 498 ~~~~~~~~~ 506 (509)
++++++++.
T Consensus 371 ~~~~~~~~~ 379 (380)
T PRK06225 371 PDVVETLRT 379 (380)
T ss_pred HHHHHHhhc
Confidence 999988764
No 77
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.5e-39 Score=334.02 Aligned_cols=313 Identities=17% Similarity=0.231 Sum_probs=250.7
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|++ |+.+++++.+.+.. .+.|+ ..|.++||+++++++ + +++++|++|+|+++++..++++++++
T Consensus 37 nen~~~~~~~v~~a~~~~~~~-----~~~Yp-~~g~~~Lr~aia~~~----~--~~~~~I~vt~Gs~e~i~~~~~~l~~~ 104 (366)
T PRK01533 37 NENPFGCSPRVLDELQKSWLD-----HALYP-DGGATTLRQTIANKL----H--VKMEQVLCGSGLDEVIQIISRAVLKA 104 (366)
T ss_pred CCCCCCCCHHHHHHHHHHHHh-----cCcCC-CCCHHHHHHHHHHHh----C--CCcceEEECCCHHHHHHHHHHHhcCC
Confidence 56666 67899988877655 23474 668899999999998 3 67899999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..|...++..|.+++.++.++ +.+|++.|++.+++ +++++++++||||||.+++.++
T Consensus 105 gd----~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~---~~~d~~~l~~~~~~-----~~~~v~i~~P~NPTG~~~~~~~ 172 (366)
T PRK01533 105 GD----NIVTAGATFPQYRHHAIIEGCEVKEVALNN---GVYDLDEISSVVDN-----DTKIVWICNPNNPTGTYVNDRK 172 (366)
T ss_pred CC----EEEEcCCcHHHHHHHHHHcCCEEEEeecCC---CCcCHHHHHHHhCc-----CCcEEEEeCCCCCCCCCcCHHH
Confidence 98 999999999999999999999999999853 37899999998876 7899999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|++++ ++|+||+|.+|.+.+ ...+....... ..++|+++||||.| |++|+|+||++ ++++
T Consensus 173 l~~l~~~~~~~~-~~iiDe~y~~~~~~~--~~~~~~~~~~~------~~~vi~~~SfSK~~-~l~GlRiG~~i---~~~~ 239 (366)
T PRK01533 173 LTQFIEGISENT-LIVIDEAYYEYVTAK--DFPETLPLLEK------HKNILVLRTFSKAY-GLASFRVGYAV---GHEE 239 (366)
T ss_pred HHHHHHhCCCCC-EEEEEccHHHhhccc--cCcchhHHhcc------CCCEEEEeCchHHh-cChHHHHhHHh---CCHH
Confidence 999999998766 577799999887643 12232222211 34599999999999 79999999998 7899
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+.+... .++++.+ .|.++..++.. . ++.++
T Consensus 240 ~~~~l~~~~~-~~~~~~~----------------------------------~q~aa~~~l~~--------~---~~~~~ 273 (366)
T PRK01533 240 LIEKLNVVRL-PFNVSSL----------------------------------AQKAATIAFGD--------D---EFIEE 273 (366)
T ss_pred HHHHHHHhcC-CCCcCHH----------------------------------HHHHHHHHhCC--------H---HHHHH
Confidence 9999988764 3567777 56666555541 2 23566
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
+++..+++++.+.+.++.+ |+++.+++++ |+|+++. ++.. +...|.++||.|++ |
T Consensus 274 ~~~~~~~~r~~~~~~l~~~-g~~~~~~~~n-f~~~~~~---------------~~~~-~~~~l~~~GI~Vr~---~---- 328 (366)
T PRK01533 274 IVRVNTEGLRQYESFCKEN-EIPFYQSQTN-FIFLPVE---------------NGGE-IYEACAHAGFIIRP---F---- 328 (366)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCccCCCcCc-EEEEeCC---------------CHHH-HHHHHHHCCcEEcc---C----
Confidence 6777778888888888887 8888888655 6776653 1233 35666689999997 3
Q ss_pred CccccccchhhhhhhHHHHHHHhh
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAKA 443 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~~ 443 (509)
.+++|++++++++|++++++...
T Consensus 329 -~~~iRis~~~~~~~~~l~~al~~ 351 (366)
T PRK01533 329 -PNGVRITVGTREQNEGVISVLQQ 351 (366)
T ss_pred -CCceEEeCCCHHHHHHHHHHHHH
Confidence 36899999999999999998853
No 78
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-38 Score=326.48 Aligned_cols=317 Identities=15% Similarity=0.242 Sum_probs=248.3
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.+++ |+.+.+++.+.+.. ...|++ .|.++||+++++++ ++++++|++|+|+++++..++++++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~-----~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al~~~~~~~~~~ 105 (357)
T PRK14809 38 NENPHGPSPAAVEAIREAAER-----VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGALDYLARAMLDP 105 (357)
T ss_pred CCCCCCCCHHHHHHHHHHHhh-----hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHHHHHHHHhcCC
Confidence 54554 56788888777654 345864 67899999999998 278899999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..+...+...|.+++.++++.+.+|.+|.+.+++... ++++|++++||||||.++|.++
T Consensus 106 gd----~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~------~~k~i~l~~p~NPTG~~~s~~~ 175 (357)
T PRK14809 106 GD----TVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD------GERIVYLTSPHNPTGSEIPLDE 175 (357)
T ss_pred CC----EEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc------CCcEEEEeCCCCCCCcCCCHHH
Confidence 98 9999999999888888889999999998765578888888776542 5899999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|++ +++||+||+|.+|.+.+ +....... ..++++++||||.| |+||+|+||++ ++++
T Consensus 176 ~~~l~~~~~~-~~~iI~De~y~~~~~~~-----~~~~~~~~------~~~vi~~~SfSK~~-~~~GlRiG~~~---~~~~ 239 (357)
T PRK14809 176 VEALAERTDE-ETLVVVDEAYGEFAERP-----SAVALVEE------RDDVAVLRTFSKAY-GLAGLRLGYAV---VPEE 239 (357)
T ss_pred HHHHHHhCcc-CcEEEEechhhhccCCc-----hhHHHHhh------CCCEEEEecchhHh-cCcchhheeee---cCHH
Confidence 9999999975 78999999999987532 11121111 23599999999999 79999999998 7899
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+.+... ..+.+.+ +|.+...++. ..+++++
T Consensus 240 ~~~~~~~~~~-~~~~~~~----------------------------------~~~~a~~~l~-----------~~~~~~~ 273 (357)
T PRK14809 240 WADAYARVNT-PFAASEL----------------------------------ACRAGLAALD-----------DDEHVER 273 (357)
T ss_pred HHHHHHHhCC-CCCCCHH----------------------------------HHHHHHHHhC-----------CHHHHHH
Confidence 9999987654 3344555 3333333332 0234677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
.++.++++++.+.+.|... . .+.+|+|+|+++. ++.++. +.+.++||.++||..|+.
T Consensus 274 ~~~~~~~~r~~l~~~L~~~-~----~~~~g~f~~~~~~---------------~~~~~~-~~l~~~gv~v~~g~~f~~-- 330 (357)
T PRK14809 274 TVETARWAREYIREELDAP-T----WESAGNFVLAEVG---------------DASAVA-EAAQERGVIVRDCTSFGL-- 330 (357)
T ss_pred HHHHHHHHHHHHHHHhcCc-c----CCCCCCEEEEECC---------------CHHHHH-HHHHHCCEEEEECccCCC--
Confidence 7888889999999988653 2 2467888897663 234444 456788999999998865
Q ss_pred CccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHH
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFRE 499 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~ 499 (509)
++ +|||+++. ++++++++++|++
T Consensus 331 ----------------------------------------------~~----------~iRls~~~-~~~~~~~l~~L~~ 353 (357)
T PRK14809 331 ----------------------------------------------PE----------CIRITCGT-REETERAVEVLNE 353 (357)
T ss_pred ----------------------------------------------CC----------eEEEecCC-HHHHHHHHHHHHH
Confidence 33 89999874 6899999999998
Q ss_pred HHH
Q psy13922 500 FHE 502 (509)
Q Consensus 500 ~~~ 502 (509)
+++
T Consensus 354 ~l~ 356 (357)
T PRK14809 354 VLA 356 (357)
T ss_pred Hhc
Confidence 874
No 79
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-38 Score=328.59 Aligned_cols=299 Identities=17% Similarity=0.239 Sum_probs=235.4
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|++ |+.+++++.+.+.... .....|++ .|.++||+++++++++++|+++++++|++|+|+++++..++++++++
T Consensus 34 ~~~~~~~~~~~~~al~~~l~~~~-~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~ 111 (368)
T PRK03317 34 NENPYPPSPALVADIAEAVAEAA-AGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGP 111 (368)
T ss_pred CCCCCCCCHHHHHHHHHHHhhhh-hhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCC
Confidence 45555 6789999998876522 23455865 57899999999999999999999999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..|...++..|.+++.++.++ +|++|++.+++++... ++++|++++||||||.+++.++
T Consensus 112 gd----~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~~~----~~~~i~l~~p~NPtG~~~~~~~ 181 (368)
T PRK03317 112 GR----TALGFVPSYSMHPIIARGTHTEWVEGPRAA--DFTLDVDAAVAAIAEH----RPDVVFLTSPNNPTGTALPLDD 181 (368)
T ss_pred CC----EEEEeCCChHHHHHHHHhcCCeeEEcccCC--CCCCCHHHHHHHHhcc----CCCEEEEeCCCCCCCCCCCHHH
Confidence 98 999999999999999999999999887653 4789999999998753 6899999999999999999888
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++| +++||+||+|.+|.+.+. .+...+... ..++|+++||||.| |++|+|+||++ ++++
T Consensus 182 l~~l~~~~---~~~lI~DE~y~~~~~~~~---~~~~~~~~~------~~~~i~~~SfSK~~-g~~GlRiG~~~---~~~~ 245 (368)
T PRK03317 182 VEAILDAA---PGIVVVDEAYAEFRRSGT---PSALTLLPE------YPRLVVSRTMSKAF-AFAGGRLGYLA---AAPA 245 (368)
T ss_pred HHHHHHHC---CceEEEeCCchhhcccCC---cCHHHHHHh------CCCEEEEEechhhh-ccchhhhhhhh---CCHH
Confidence 88888877 799999999999876532 233333221 22599999999999 79999999998 8999
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+..... .++.+.+ .|.++..+++. .+ +..+
T Consensus 246 ~~~~l~~~~~-~~~~s~~----------------------------------~~~a~~~~l~~-------~~----~~~~ 279 (368)
T PRK03317 246 VVDALRLVRL-PYHLSAV----------------------------------TQAAARAALRH-------AD----ELLA 279 (368)
T ss_pred HHHHHHhcCC-CCCCCHH----------------------------------HHHHHHHHhhC-------HH----HHHH
Confidence 9999987654 3355555 44444444331 11 1333
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
.++.+.++++.+.+.|++. |+.+.++++++++|.++. ++.. +...|.++||.+++
T Consensus 280 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~---------------~~~~-~~~~l~~~Gv~v~~ 334 (368)
T PRK03317 280 SVAALRAERDRVVAWLREL-GLRVAPSDANFVLFGRFA---------------DRHA-VWQGLLDRGVLIRD 334 (368)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCEeCCCCCcEEEEeccC---------------CHHH-HHHHHHHCCEEEEe
Confidence 4456778888899999888 888888999999885442 2333 34556678999986
No 80
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=2.9e-38 Score=324.42 Aligned_cols=291 Identities=20% Similarity=0.221 Sum_probs=223.4
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
|+.+++++.+.+.. ..+|++.. ..+||+++|+++ .+++++|++|+|++++|..+++++. +++ .
T Consensus 37 ~~~~~~a~~~~~~~-----~~~Y~~~~-~~~Lr~aia~~~------~v~~~~I~it~G~~~~i~~~~~~l~-~g~----~ 99 (360)
T PRK07392 37 PESVIAAIQSALSA-----LRHYPDPD-YRELRLALAQHH------QLPPEWILPGNGAAELLTWAGRELA-QLR----A 99 (360)
T ss_pred CHHHHHHHHHHHHH-----hhcCCCcC-HHHHHHHHHHHh------CcChhhEEECCCHHHHHHHHHHHhC-CCC----e
Confidence 57888888776664 34598765 589999999998 3788999999999999999999875 566 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCC---CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQW---GLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~---~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
|+++.|+|..|...++..|.+++.+++++++++ ..+++.+++.. + ++++++++|||||||.+++++++.+
T Consensus 100 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~l~nP~NPTG~~~~~~~l~~- 172 (360)
T PRK07392 100 VYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-T-----PNDGLLLNNPHNPTGKLWSREAILP- 172 (360)
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-c-----CCCEEEEeCCCCCCCCCcCHHHHHH-
Confidence 999999999999999999999999999866554 24555554432 2 5889999999999999999766555
Q ss_pred HHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHH
Q psy13922 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAM 263 (509)
Q Consensus 184 ~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~ 263 (509)
+++++++ +|+||+|.+|.+++ ...++...... ..++|+++||||.| |++|+|+||++ +++++++.
T Consensus 173 --l~~~~~~-~IiDE~y~~~~~~~--~~~s~~~~~~~------~~~vi~i~S~SK~~-~l~GlRiG~~v---~~~~~~~~ 237 (360)
T PRK07392 173 --LLEQFAL-VVVDEAFMDFLPPD--AEQSLIPCLAE------YPNLIILRSLTKFY-SLPGLRLGYAI---AHPDRLQR 237 (360)
T ss_pred --HHHHCCE-EEEECchhhhccCc--cccchHHHhhc------CCCEEEEEechhhh-cCCchheeeee---CCHHHHHH
Confidence 5567775 66699999998754 23343332221 24599999999999 79999999998 78999988
Q ss_pred HHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHH
Q psy13922 264 LHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDS 343 (509)
Q Consensus 264 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (509)
+.+... .++++.+ .|.++..+++ + . .+.+.+++.
T Consensus 238 ~~~~~~-~~~~s~~----------------------------------~q~~~~~~l~-----~---~---~~~~~~~~~ 271 (360)
T PRK07392 238 WQQWRD-PWPVNGL----------------------------------AAAAAIAALA-----D---R---DFQQQTWAW 271 (360)
T ss_pred HHhhCC-CCCCCHH----------------------------------HHHHHHHHhc-----c---H---HHHHHHHHH
Confidence 876553 3456676 5666555554 1 1 224555667
Q ss_pred HHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 344 LKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 344 ~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++++++.+.+.|+.++++.+.+ .+++|+|++++. ++.++...+++++||.++||..|+.
T Consensus 272 ~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~~--------------~~~~l~~~ll~~~gv~v~pg~~f~~ 330 (360)
T PRK07392 272 LPPAREALFQGLASLPGLTPLP-SAANFLLVQSQG--------------SALQLQEKLLQQHRILIRDCLSFPE 330 (360)
T ss_pred HHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcCC--------------CHHHHHHHHHhhCCEEEEeCCCCCC
Confidence 8889999999999888887755 678899976641 3455566777889999999998865
No 81
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.2e-37 Score=319.33 Aligned_cols=297 Identities=20% Similarity=0.247 Sum_probs=227.8
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|++ |+.+++++.+.+.. ..+|++. +..++|+++++++ + +++++|++|+|+++++..+++.+ .+
T Consensus 28 ~~~~~~~p~~~~~a~~~~~~~-----~~~y~~~-~~~~lr~~ia~~~----~--~~~~~i~it~Ga~~~l~~~~~~l-~~ 94 (356)
T PRK08056 28 NINPLGMPVSLKRAIIDNLDC-----AERYPDV-EYRHLHQALARHH----Q--VPASWILAGNGETESIFAVVSGL-KP 94 (356)
T ss_pred ccCCCCCCHHHHHHHHHHHHh-----cccCcCc-cHHHHHHHHHHHh----C--cChhhEEECCCHHHHHHHHHHHh-CC
Confidence 54544 67899998887765 2348764 6799999999998 3 67899999999999999999987 45
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
+ .++++.|+|..|...++..|.+++.+|++++.+|.+| +.+++.+.+ ++++|++++||||||.+++.++
T Consensus 95 g-----~viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~-----~~k~v~l~~p~NPTG~~~~~~~ 163 (356)
T PRK08056 95 R-----RAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTP-----DLDCLFLCTPNNPTGLLPERQL 163 (356)
T ss_pred C-----CEEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccC-----CCCEEEEeCCcCCCCCCCCHHH
Confidence 4 4677899999999999999999999999876667777 445455554 7999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|++++++||+||+|.+|.+++. .+.+ .... ..++++++||||.| |++|+|+||++. .+++
T Consensus 164 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~---~~~~------~~~~i~~~S~SK~~-~~~G~RiG~~v~--~~~~ 230 (356)
T PRK08056 164 LQAIAERCKSLNIALILDEAFIDFIPDET-GFIP---QLAD------NPHLWVLRSLTKFY-AIPGLRLGYLVN--SDDA 230 (356)
T ss_pred HHHHHHHHHhcCCEEEEecchhccCCcch-HHHH---Hhcc------CCCEEEEEechhhc-cCcchhheeeec--CCHH
Confidence 99999999999999999999999876431 1111 1111 12589999999999 799999999972 3678
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+.+... .++++.+ +|.+...++.. . .+.++
T Consensus 231 ~~~~l~~~~~-~~~~~~~----------------------------------~~~~a~~~l~~--------~---~~~~~ 264 (356)
T PRK08056 231 AVARMRRQQM-PWSINAF----------------------------------AALAGEVILQD--------R---AYQQA 264 (356)
T ss_pred HHHHHHHhCC-CCchhHH----------------------------------HHHHHHHHhCC--------H---HHHHH
Confidence 8888876543 3345555 45554444431 1 23577
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+++.++++++.+.+.|++++++.+.++ +++|+|+++.. ++.+++. .|.++||.++||..|..
T Consensus 265 ~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~--------------~~~~~~~-~l~~~gI~v~~~~~f~~ 326 (356)
T PRK08056 265 TWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCER--------------PDIDLQR-ALLTQRILIRSCANYPG 326 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCC--------------ChHHHHH-HHHHCCeEEEECCCCCC
Confidence 788899999999999998888877655 57788976651 2334444 44468999999998854
No 82
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-38 Score=322.66 Aligned_cols=296 Identities=19% Similarity=0.258 Sum_probs=233.1
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ |+.+.+++.+.+.. .. |.|..|.+++|++++++++ +++++|++|+|+++++..++++++++
T Consensus 37 n~~~~~~~~~v~~a~~~~~~~-----~~-~~p~~g~~~lr~~ia~~~~------~~~~~i~~t~G~~~~l~~~~~~~~~~ 104 (359)
T PRK03158 37 NENPYGPSPKVKEAIAAHLDE-----LA-LYPDGYAPELRTKVAKHLG------VDEEQLLFGAGLDEVIQMISRALLNP 104 (359)
T ss_pred CCCCCCCCHHHHHHHHHHHHH-----hh-cCCCCcHHHHHHHHHHHhC------CCHHHEEECCCHHHHHHHHHHHHhCC
Confidence 44444 66788888877654 33 5566788999999999982 57889999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..+...+...|.+++.+|.+ ++.+|++.+++.+++ +++++++++||||||.+++.++
T Consensus 105 gd----~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~-----~~~~v~i~~p~NPtG~~~~~~~ 172 (359)
T PRK03158 105 GT----NTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDE-----QTKIVWICNPNNPTGTYVNHEE 172 (359)
T ss_pred CC----EEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCC-----CCCEEEEeCCCCCCCCCCCHHH
Confidence 88 99999999999999999999999999987 247899999988866 7899999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+.++++.|+ +|++||+||+|.++.+.+. ..+....... ..++++++||||.| |++|+|+||++ ++++
T Consensus 173 l~~~~~~~~-~~~~ii~De~y~~~~~~~~--~~~~~~~~~~------~~~vi~~~S~SK~~-g~~GlRiG~~v---~~~~ 239 (359)
T PRK03158 173 LLSFLESVP-SHVLVVLDEAYYEYVTAED--YPDTLPLLEK------YENLIVLRTFSKAY-GLAALRVGYGI---ASEE 239 (359)
T ss_pred HHHHHHhCC-CCcEEEEECchHhhcCCcc--cccHHHHHHh------cCCEEEEEechHhh-cCcchhhehhc---CCHH
Confidence 999888774 6999999999999887532 2222222221 23599999999999 79999999998 8999
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+.+.... ++++.+ .|.++..++.. . ++.++
T Consensus 240 ~~~~~~~~~~~-~~~~~~----------------------------------~q~~~~~~l~~--------~---~~~~~ 273 (359)
T PRK03158 240 LIEKLNIARPP-FNTTRI----------------------------------AQYAAIAALED--------Q---AFLKE 273 (359)
T ss_pred HHHHHHHhcCC-CCCCHH----------------------------------HHHHHHHHhcC--------H---HHHHH
Confidence 99999876653 456666 55555555541 2 23566
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
.++.++++++.+.+.|.+. ++.+.++. ++|+|+++.. ++.+++..+ .++||.++||..|+.
T Consensus 274 ~~~~~~~~~~~~~~~l~~~-~~~~~~~~-g~~i~~~~~~--------------~~~~~~~~l-~~~gv~v~~g~~f~~ 334 (359)
T PRK03158 274 CVEKNAEGLEQYYAFCKEY-GLFYYPSQ-TNFIFVDTGR--------------DANELFEAL-LKKGYIVRSGAALGF 334 (359)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeeCCCc-CcEEEEECCC--------------CHHHHHHHH-HHCCeEEeeCCCCCC
Confidence 6777888888899999888 77776554 6788976641 244444455 467999999998864
No 83
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-38 Score=317.50 Aligned_cols=314 Identities=20% Similarity=0.303 Sum_probs=258.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
|+.+++++.+.+.. +++|+++ ...+++++++++++ . +++++|++++|+.+.|..++++++.+|| +
T Consensus 37 ~~~~~~~~~~~~~~-----~~rYPd~-~~~~l~~a~a~~~~----~-~~~~~V~~gnGsde~i~~l~~~~~~~gd----~ 101 (356)
T COG0079 37 PPKVIEAIRAALDK-----LNRYPDP-DYRELRAALAEYYG----V-VDPENVLVGNGSDELIELLVRAFVEPGD----T 101 (356)
T ss_pred CHHHHHHHHHHHHh-----hccCCCC-cHHHHHHHHHHHhC----C-CCcceEEEcCChHHHHHHHHHHhhcCCC----E
Confidence 47889988888875 5669887 55899999999994 2 6788999999999999999999999998 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+++.|+|..|...++..|++++.++..+ |.+|++.+.+.+.+ ++++|+++|||||||..++.++++++++.
T Consensus 102 vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~-----~~~lv~i~nPNNPTG~~~~~~~l~~l~~~ 173 (356)
T COG0079 102 VLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRD-----KTKLVFLCNPNNPTGTLLPREELRALLEA 173 (356)
T ss_pred EEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 99999999999999999999999999886 78999999999998 79999999999999999999999999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
+.+ +.+||+||+|.+|.. .+...+... +.|+++++||||.| |++|+|+||++ +++++++.+.+
T Consensus 174 ~~~-~~~vVvDEAY~eF~~------~~~~~l~~~------~~nlivlRTfSKa~-gLAGlRlGy~i---a~~~~i~~l~~ 236 (356)
T COG0079 174 LPE-GGLVVIDEAYIEFSP------ESSLELLKY------PPNLIVLRTFSKAF-GLAGLRVGYAI---ANPELIAALNK 236 (356)
T ss_pred CCC-CcEEEEeCchhhcCC------chhhhhccC------CCCEEEEEecHHhh-hcchhceeecc---CCHHHHHHHHH
Confidence 988 999999999999874 222222221 45699999999999 89999999988 99999999999
Q ss_pred hhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHH
Q psy13922 267 SISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQ 346 (509)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (509)
.+..| +.|.+ ++++..++++ ++ +++++.++...+
T Consensus 237 vr~p~-~v~~~----------------------------------a~~aa~aal~---------~~--~~~~~~~~~~~~ 270 (356)
T COG0079 237 VRPPF-NVSSP----------------------------------ALAAAIAALR---------DA--DYLEESVERIRE 270 (356)
T ss_pred hcCCC-CCCHH----------------------------------HHHHHHHHcc---------cH--HHHHHHHHHHHH
Confidence 88744 56666 4555555544 11 458889999999
Q ss_pred HHHHHHHHHhcCCCCe-eccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccc
Q psy13922 347 RAKMVADTFNSIEGMS-CNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFR 425 (509)
Q Consensus 347 ~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r 425 (509)
.++.+.+.|+.++ +. ++++.++ |+++++.. . . ...+.+.|.++||.++.... .. ...+|+|
T Consensus 271 ~r~rl~~~l~~~~-~~~v~pS~aN-Fvlv~~~~-~------------~-~~~l~~~L~~~giivR~~~~-~~-~~~~~lR 332 (356)
T COG0079 271 ERERLYAALKALG-LFGVFPSQAN-FVLVRVPD-A------------E-AAALAEALLKKGILVRDCSS-VG-LLPGYLR 332 (356)
T ss_pred HHHHHHHHHHhCC-CCeecCCCCc-EEEEECCC-c------------c-HHHHHHHHHHCCEEEEeCCC-CC-CCCCeEE
Confidence 9999999999994 55 6677755 55555541 0 1 11246677778999998865 22 3568999
Q ss_pred cchhhhhhhHHHHHHHhhc
Q psy13922 426 QQVWWRHYTQRAIAKAKAE 444 (509)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~ 444 (509)
++|+++++|++++++....
T Consensus 333 itvgt~een~~ll~AL~~~ 351 (356)
T COG0079 333 ITVGTPEENDRLLAALREV 351 (356)
T ss_pred EEeCCHHHHHHHHHHHHHH
Confidence 9999999999999987653
No 84
>KOG0634|consensus
Probab=100.00 E-value=5.8e-38 Score=307.86 Aligned_cols=359 Identities=21% Similarity=0.234 Sum_probs=280.7
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE 123 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~ 123 (509)
...+|++..|.++|...+.++..-....+.-.+ +|++|+|.+.++..+++.+++.|| .|++..++|.+....++.
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd----~vlie~~ty~~AL~s~~a 167 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGD----HVLIEEYTYPSALQSMEA 167 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCC----ceEEecccchHHHHhccc
Confidence 345799999999999999996641222222233 899999999999999999999999 999999999999999999
Q ss_pred cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc----cCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 124 FNMEQIGYYLDESKQWGLPISELERSITEARK----HCNPRAIVI-INPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 124 ~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~----~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.|+++++|+++.+ +++++.|++.+.+-.. .++++++|. ++-+||||..++.+..++|.++|++|+++||+||
T Consensus 168 ~gv~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDd 244 (472)
T KOG0634|consen 168 LGVKIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDD 244 (472)
T ss_pred cCceEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecC
Confidence 9999999999877 8999999999976322 256888884 7999999999999999999999999999999999
Q ss_pred cCCcccccC---C----CccccHH----HHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHh
Q psy13922 199 VYQDNVYAE---G----SKFYSFK----KVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 199 ay~~~~~~~---~----~~~~~~~----~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~ 267 (509)
.|..+.++. . .+..+-. ++.++.-.-+.+++||...||||.++ ||+|+||++ +++.+++++...
T Consensus 245 pYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia--PGlRlG~it---~~~~~l~ril~~ 319 (472)
T KOG0634|consen 245 PYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA--PGLRLGWIT---GNSLFLKRILDL 319 (472)
T ss_pred ccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc--CcceeEEee---cCHHHHHHHhhh
Confidence 999998862 1 1112211 22333333345678999999999995 999999998 899899988776
Q ss_pred hh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHH
Q psy13922 268 IS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQ 346 (509)
Q Consensus 268 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (509)
.. .+.+++.+ .|..+.++++. ..-+.|.+|+.+++..+..
T Consensus 320 ae~~t~~pSg~----------------------------------sq~iv~a~l~~-----wgqeG~~~wi~~l~~~Yt~ 360 (472)
T KOG0634|consen 320 AEVATSGPSGF----------------------------------SQGIVYAMLKR-----WGQEGFLRWIQHLRSSYTE 360 (472)
T ss_pred cceeecCcccc----------------------------------cHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH
Confidence 55 45567776 44444444331 0014567889999999999
Q ss_pred HHHHHHHHHhc-CCC--CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccc
Q psy13922 347 RAKMVADTFNS-IEG--MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYH 423 (509)
Q Consensus 347 ~~~~l~~~L~~-~~g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~ 423 (509)
|++++..+|.+ +|. .++.+|.+|+|+|++++.+.- -.+.+++..++.....+.+.||.+++|.+|...
T Consensus 361 Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~----~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~----- 431 (472)
T KOG0634|consen 361 RRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINF----DTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVD----- 431 (472)
T ss_pred HHHHHHHHHHHhCCCCeeEEecCCcceEEEEEeccccc----ccccchHHHHHHHHHHHHHCCeEEecCceeEEc-----
Confidence 99999999998 664 577899999999988852110 011233334566778888999999999999883
Q ss_pred cccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHH
Q psy13922 424 FRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 424 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~ 502 (509)
|.. +.+..|||++++ .++++++++++||..+++
T Consensus 432 ------------------------------------------p~~----s~~kiffRls~a~a~~e~l~~g~~rf~~~ik 465 (472)
T KOG0634|consen 432 ------------------------------------------PES----SWSKIFFRLSIAFAEPEKLDEGIERFGSVIK 465 (472)
T ss_pred ------------------------------------------Ccc----CCCcceEEEEeecCCHHHHHHHHHHHHHHHH
Confidence 231 123359999999 899999999999999999
Q ss_pred HHHhhcC
Q psy13922 503 EFLAKYK 509 (509)
Q Consensus 503 ~~~~~~~ 509 (509)
++.+.+|
T Consensus 466 e~f~~~~ 472 (472)
T KOG0634|consen 466 EHFITNK 472 (472)
T ss_pred HHhhccC
Confidence 8876553
No 85
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.6e-38 Score=320.09 Aligned_cols=294 Identities=21% Similarity=0.327 Sum_probs=232.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|++ |+.+++++.+.+.. ..+.+|++ .|.+++|++++++++ .. ..++|++|+|+++++..++.+++++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~-~~~~~lr~~ia~~~~----~~-~~~~I~~t~G~~~~i~~~~~~~~~~ 104 (356)
T PRK04870 34 MENPYRLPAELRAELGERLAE---VALNRYPD-PRAAALKAALRAAMG----VP-AGADVLLGNGSDELIQLLALACAKP 104 (356)
T ss_pred CCCCCCCCHHHHHHHHHHhhc---cccccCCC-CCHHHHHHHHHHHhC----cC-CCCcEEEcCCHHHHHHHHHHHhcCC
Confidence 55655 67899999988875 44566987 577999999999983 22 2358999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|..+...++..|++++.+++++ +|.+|++.+++.+.+. ++++|++++||||||.+++.++
T Consensus 105 gd----~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~~~~~----~~~~v~l~~p~NPtG~~~~~~~ 174 (356)
T PRK04870 105 GA----TVLAPEPGFVMYRMSAKLAGLEFVGVPLTA--DFTLDLPAMLAAIAEH----RPALVFLAYPNNPTGNLFDDAD 174 (356)
T ss_pred CC----EEEECCCCHHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhhcC----CCCEEEEcCCCCCCCCCCCHHH
Confidence 98 999999999999999999999999999874 3789999999998753 7999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++| ++++|+||+|.+|... ...+ .+ .. ..++++++|||| + |++|+|+||++ ++++
T Consensus 175 ~~~i~~~~---~~~ii~De~y~~~~~~---~~~~--~~-~~------~~~vi~~~S~SK-~-~~~GlRiG~~i---~~~~ 234 (356)
T PRK04870 175 VERIIEAA---PGLVVVDEAYQPFAGD---SWLP--RL-AR------FPNLLVMRTVSK-L-GLAGLRLGYLA---GHPA 234 (356)
T ss_pred HHHHHHHC---CCEEEEECCchhhcCc---chHH--HH-hh------CCCEEEEecchh-h-hhHHHhhhhhh---CCHH
Confidence 99999988 7899999999987542 1111 11 11 235999999999 8 79999999998 7999
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+...... ++.+.+ .|.+...+++ ..+++++
T Consensus 235 ~i~~~~~~~~~-~~~~~~----------------------------------~q~~a~~~l~-----------~~~~~~~ 268 (356)
T PRK04870 235 WIAELDKVRPP-YNVNVL----------------------------------TQATALFALE-----------HVDVLDA 268 (356)
T ss_pred HHHHHHHccCC-CcCCHH----------------------------------HHHHHHHHHh-----------CHHHHHH
Confidence 99998876642 345555 4544444433 1123677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
.++.++++++.+.+.|++++++.+.+ .+++|+|++++ ++.. +...|+++||.++||..|+.
T Consensus 269 ~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~---------------~~~~-~~~~l~~~gI~v~~~~~f~~ 329 (356)
T PRK04870 269 QAAQLRAERTRLAAALAALPGVTVFP-SAANFILVRVP---------------DAAA-VFDGLKTRGVLVKNLSGMHP 329 (356)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEECC-CCCeEEEEECC---------------CHHH-HHHHHHHCCEEEEECCCCCC
Confidence 78888999999999999988887654 55678887654 1333 35677889999999988854
No 86
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-37 Score=320.02 Aligned_cols=292 Identities=20% Similarity=0.312 Sum_probs=229.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
|+.+.+++.+.... ..+|++..| .++|+++++++ + +++++|++|+|+++++..++.+++++|| .
T Consensus 51 ~~~~~~al~~~~~~-----~~~Y~~~~g-~~lr~~ia~~~----~--~~~~~i~~t~G~~~~l~~~~~~~~~~gd----~ 114 (371)
T PRK05166 51 SPAVRRAFADIAEL-----LRLYPDPQG-RALREAIAART----G--VPADRIILGNGSEDLIAVICRAVLRPGD----R 114 (371)
T ss_pred CHHHHHHHHHHHHH-----hhcCCCCcH-HHHHHHHHHHh----C--cCHHHEEEcCCHHHHHHHHHHHhcCCCC----E
Confidence 56677777664432 445999888 58999999988 3 5788999999999999999999999998 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+++.|+|..+...++..|.+++.++.+++ +++|++.+++.+++ +++++++++||||||.+++.+++++|+++
T Consensus 115 vli~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~l~~~ 187 (371)
T PRK05166 115 VVTLYPSFPLHEDYPTMMGARVERVTVTPD--LGFDLDALCAAVAR-----APRMLMFSNPSNPVGSWLTADQLARVLDA 187 (371)
T ss_pred EEEcCCChHHHHHHHHHcCCeEEEeecCCC--CCCCHHHHHHhhhc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 999999999999999999999999998754 58899999998877 68999999999999999999999999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
|++ +++||+||+|.+|.+++ .+++......+. ..++|+++||||.| |++|+|+||+++ .++++++.+.+
T Consensus 188 ~~~-~~~ii~De~y~~~~~~~--~~~~~~~~~~~~-----~~~vi~i~SfSK~~-~l~GlRiG~~i~--~~~~l~~~~~~ 256 (371)
T PRK05166 188 TPP-ETLIVVDEAYAEYAAGD--DYPSALTLLKAR-----GLPWIVLRTFSKAY-GLAGLRVGYGLV--SDPELVGLLDR 256 (371)
T ss_pred CCC-CcEEEEECcHHHhcCCc--CcccHHHHHhhc-----CCCEEEEeechHhh-hcchhheeeeec--CCHHHHHHHHH
Confidence 864 89999999999998643 334444433221 23499999999999 799999999763 58899998877
Q ss_pred hhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHH
Q psy13922 267 SISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQ 346 (509)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (509)
... ..+++.+ .|.++..++.. . +++++.++.+++
T Consensus 257 ~~~-~~~~~~~----------------------------------~q~~~~~~l~~--------~---~~~~~~~~~~~~ 290 (371)
T PRK05166 257 VRT-PFNVNGA----------------------------------AQAAALAALDD--------E---EHLAKGVALALA 290 (371)
T ss_pred hcc-CCCCCHH----------------------------------HHHHHHHHhcC--------H---HHHHHHHHHHHH
Confidence 654 3456666 44443333320 2 346777888899
Q ss_pred HHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 347 RAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 347 ~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
+++.+.+.|++. |+.+. +.+|+|+|+++.. ++.++...++ ++||.++||..+
T Consensus 291 ~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~--------------~~~~l~~~l~-~~gi~v~p~~~~ 342 (371)
T PRK05166 291 ERERLKKELAEM-GYRIA-PSRANFLFFDARR--------------PASAVAEALL-RQGVIVKPWKQP 342 (371)
T ss_pred HHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCC--------------CHHHHHHHHH-HCCeEEecCCCC
Confidence 999999999988 77764 4557788977641 2444444444 569999998754
No 87
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.1e-38 Score=322.23 Aligned_cols=305 Identities=14% Similarity=0.210 Sum_probs=239.8
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC-CCCCCeEEEcCCCChhHHHHHHhc
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV-DGKKPGVLIPIPQYPLYSASLAEF 124 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~~~~~Vlv~~p~y~~~~~~~~~~ 124 (509)
..+|+++. ..+||+++++++ + +++++|++|+|+++++.+++++++.+| + .|+++.|+|..|...++..
T Consensus 53 ~~~Y~~~~-~~~lr~~ia~~~----~--~~~~~I~~t~G~~~~l~~~~~~~~~~g~~----~vlv~~p~y~~~~~~~~~~ 121 (364)
T PRK04781 53 TRRYPDPQ-PPGLRSALAALY----G--CAPEQLLIGRGSDEAIDLLVRALCVPGRD----AVLVTPPVFGMYAVCARLQ 121 (364)
T ss_pred hccCCCCC-HHHHHHHHHHHh----C--cChHHEEEeCCHHHHHHHHHHHhcCCCCC----eEEEcCCChHHHHHHHHHc
Confidence 45588765 589999999998 3 678999999999999999999999887 6 8999999999999888999
Q ss_pred CCEEEEEecCC-CCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcc
Q psy13922 125 NMEQIGYYLDE-SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDN 203 (509)
Q Consensus 125 g~~~~~v~~~~-~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~ 203 (509)
|.+++.+++++ +.+|.+|++.+++.+... ++++|++++||||||.+++.+++++|+++|+ ++++||+||+|.+|
T Consensus 122 g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f 196 (364)
T PRK04781 122 NAPLVEVPLVDGADGFHADVPAIVAAALAS----NAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEF 196 (364)
T ss_pred CCEEEEEecCCCccCCCcCHHHHHHHHhcc----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhh
Confidence 99999999853 346778999887655432 7999999999999999999999999999985 58999999999998
Q ss_pred cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccc
Q psy13922 204 VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLP 283 (509)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 283 (509)
.+.. +....... ..++|+++||||.| |+||+|+||++ +++++++.+.+.... ++.+.+
T Consensus 197 ~~~~-----~~~~~~~~------~~~vi~~~SfSK~~-gl~GlRvGy~v---~~~~l~~~l~~~~~~-~~~~~~------ 254 (364)
T PRK04781 197 SDVP-----SAVGLLAR------YDNLAVLRTLSKAH-ALAAARIGSLI---ANAELIAVLRRCQAP-YPVPTP------ 254 (364)
T ss_pred cCCc-----chHHHHhh------CCCEEEEecChhhc-ccccceeeeee---CCHHHHHHHHhccCC-CCCCHH------
Confidence 7531 22222211 23599999999999 89999999998 899999999887653 345555
Q ss_pred cccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCee
Q psy13922 284 QLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSC 363 (509)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 363 (509)
.|.++..++. ++.++ +..+.++.++++++.+.+.|++++++..
T Consensus 255 ----------------------------~~~~a~~~l~-----~~~~~----~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 297 (364)
T PRK04781 255 ----------------------------CAALAEQALS-----APALA----VTARRVAEVRAERERLHAALAQLPGVRR 297 (364)
T ss_pred ----------------------------HHHHHHHHHh-----cccHH----HHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 3444334443 11122 2344455678899999999998877753
Q ss_pred ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhh
Q psy13922 364 NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKA 443 (509)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 443 (509)
..|.+|+|+|++++ +... +...+.++||.++||..|.. ..+|+|++++.+.+|++++++...
T Consensus 298 ~~p~~g~f~~~~~~---------------~~~~-~~~~l~~~gI~v~~~~~~~~--~~~~~Ris~~~~~~~~~l~~al~~ 359 (364)
T PRK04781 298 VYPSQGNFLLVRFD---------------DAEA-AFQALLAAGVVVRDQRAAPR--LSDALRITLGTPEQNDRVLAALQR 359 (364)
T ss_pred ECCCCCcEEEEEcC---------------CHHH-HHHHHHHCCeEEeeCCCCCC--CCCeEEEeCCCHHHHHHHHHHHHH
Confidence 44666888997764 1233 45667789999999987754 357999999999999999998754
No 88
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.2e-37 Score=316.30 Aligned_cols=296 Identities=16% Similarity=0.177 Sum_probs=229.3
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF 124 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~ 124 (509)
..++|+.+. ..+||++++++++ +++++|++|+|+++++..++. +.+++ .|+++.|+|..|...++..
T Consensus 33 ~~~~Yp~~~-~~~lr~~ia~~~~------~~~~~I~it~Gs~~~l~~~~~-~~~~~-----~vv~~~P~y~~y~~~~~~~ 99 (332)
T PRK06425 33 DISIYPEIS-YTDIEDQIKIYTQ------GLKIKVLIGPGLTHFIYRLLS-YINVG-----NIIIVEPNFNEYKGYAFTH 99 (332)
T ss_pred hcccCcCcC-HHHHHHHHHHHhC------CCcceEEECCCHHHHHHHHHH-HhCCC-----cEEEeCCChHHHHHHHHHc
Confidence 355697654 4889999999983 678899999999999999997 45664 5777799999999999999
Q ss_pred CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCccc
Q psy13922 125 NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204 (509)
Q Consensus 125 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~ 204 (509)
|++++.+|+++. .+|.+.++ .. ++++|++++||||||.+++.+++++|+++|++++++||+||+|.+|.
T Consensus 100 G~~v~~vp~~~~---~~~~~~l~----~~----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~ 168 (332)
T PRK06425 100 GIRISALPFNLI---NNNPEILN----NY----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFV 168 (332)
T ss_pred CCeEEEEeCCcc---cCcHHHHh----hc----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccc
Confidence 999999998752 55655443 22 68999999999999999999999999999999999999999999998
Q ss_pred ccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhcccc
Q psy13922 205 YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQ 284 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 284 (509)
+++ ..+...+..+ ..++|+++||||.| |+||+|+||++ +++++++.+.+....+ ..+..
T Consensus 169 ~~~---~~~~~~~~~~------~~~vi~~~SfSK~~-~l~GlRiGy~v---~~~~li~~l~~~~~~~-~~~~~------- 227 (332)
T PRK06425 169 PNR---AEEDVLLNRS------YGNVIIGRSLTKIL-GIPSLRIGYIA---TDDYNMKISRKITEPW-SVCDP------- 227 (332)
T ss_pred ccc---chhHHHHhcc------CCCEEEEeecHHhc-CCchhhheeee---cCHHHHHHHHHcCCCC-ccCHH-------
Confidence 642 2233333321 23599999999999 89999999998 8999999988754322 22222
Q ss_pred ccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec
Q psy13922 285 LFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN 364 (509)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 364 (509)
++.++... ....+.+++++.++++++.+.+.|+++ |+.+.
T Consensus 228 ---------------------------~~~~l~~~------------~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~ 267 (332)
T PRK06425 228 ---------------------------AIDFIRSI------------DLDYVAKHSLDIMENERSYLINNLEAM-GFRAA 267 (332)
T ss_pred ---------------------------HHHHHHHh------------hhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC
Confidence 12222110 112235678899999999999999998 78876
Q ss_pred cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHh
Q psy13922 365 PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAK 442 (509)
Q Consensus 365 ~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~ 442 (509)
.+.+|.|+|++++ ++.++...++ ++||.++||..|+. .+.++||++++++++|++++++..
T Consensus 268 ~~~~g~f~~~~~~---------------~~~~~~~~l~-~~gi~v~~~~~f~~-~~~~~iRis~~~~~~~~~l~~al~ 328 (332)
T PRK06425 268 GDPSANFITFMIP---------------DAHDFYSYLL-KNGILVRLLDDYEC-LGEQYIRIAIRRRSFNIKLVNALR 328 (332)
T ss_pred CCCCceEEEEEcC---------------CHHHHHHHHH-HCCeEEEECCCCCC-CCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5446677886653 2444444444 57999999999964 346899999999999999999875
No 89
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3e-37 Score=317.74 Aligned_cols=325 Identities=18% Similarity=0.220 Sum_probs=250.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|.+ |+.+++++.+.+.. ..+|+++. .++||+++|+++ + +++++|++|+|+++++..++.+++++
T Consensus 40 ~~~~~~~~~~~~~a~~~~~~~-----~~~Y~~~~-~~~Lr~~ia~~~----~--~~~~~I~it~G~~~~l~~~~~~~~~~ 107 (369)
T PRK08153 40 NESGFGPSPSVIAAMREAAAE-----IWKYGDPE-NHDLRHALAAHH----G--VAPENIMVGEGIDGLLGLIVRLYVEP 107 (369)
T ss_pred CCCCCCCCHHHHHHHHHHHHH-----hhcCCCCc-cHHHHHHHHHHh----C--CCHHHEEEcCCHHHHHHHHHHHhcCC
Confidence 56666 67888888777644 23488774 689999999998 2 67899999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..+...+...|.+++.+|.+.+ .+|++.+++.+... ++++|++++||||||.++|.++
T Consensus 108 gd----~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~----~~~~i~l~~P~NPtG~~~~~~~ 176 (369)
T PRK08153 108 GD----PVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRE----NAPLVYLANPDNPMGSWHPAAD 176 (369)
T ss_pred CC----EEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhccc----CCcEEEEeCCCCCCCCCCCHHH
Confidence 98 9999999999999999999999999998654 67899888776543 7899999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+.+|+++|+ ++++||+||+|.++.+++ ...++ ... ..++|+++||||.| |++|+|+||++ ++++
T Consensus 177 l~~l~~~~~-~~~~lI~DE~y~~~~~~~--~~~~~---~~~------~~~~i~~~SfSK~~-g~~GlRiG~~v---~~~~ 240 (369)
T PRK08153 177 IVAFIEALP-ETTLLVLDEAYCETAPAG--AAPPI---DTD------DPNVIRMRTFSKAY-GLAGARVGYAI---GAPG 240 (369)
T ss_pred HHHHHHhCC-CCcEEEEeCchhhhcCcc--cchhh---hhc------CCCEEEEecchHhc-cCcchheeeee---cCHH
Confidence 999999887 499999999999987653 22222 111 23599999999999 79999999998 7999
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+.+.... ++.+.+ +|.++..++.. . +++++
T Consensus 241 ~~~~l~~~~~~-~~~s~~----------------------------------~q~~~~~~l~~--------~---~~~~~ 274 (369)
T PRK08153 241 TIKAFDKVRNH-FGMNRI----------------------------------AQAAALAALKD--------Q---AYLAE 274 (369)
T ss_pred HHHHHHHhhcC-CCCCHH----------------------------------HHHHHHHHhcC--------H---HHHHH
Confidence 99999876653 456666 55555555441 1 23677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe-cCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV-PGAGFGQV 418 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~-pg~~f~~~ 418 (509)
+++.++++++.+.+.|++. |+.+. +.+++|+|+++.... .....+ .+.|.++||.++ ||..
T Consensus 275 ~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~~-----------~~a~~l-~~~l~~~Gi~v~~p~~~---- 336 (369)
T PRK08153 275 VVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRDG-----------AFARAV-LDGLIARDIFVRMPGVA---- 336 (369)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCCc-----------ccHHHH-HHHHHHCCeEEeeCCCC----
Confidence 8889999999999999887 77644 567888887664100 112333 344456899995 5431
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
.+.+ ++|++++ ++++++..++.|.
T Consensus 337 -----------------------------------------------~~~~--------~iRis~~-~~~~~~~~~~al~ 360 (369)
T PRK08153 337 -----------------------------------------------PLDR--------CIRVSCG-PDEELDLFAEALP 360 (369)
T ss_pred -----------------------------------------------CCCC--------eEEEecC-CHHHHHHHHHHHH
Confidence 1111 8899988 5788888888888
Q ss_pred HHHHHHH
Q psy13922 499 EFHEEFL 505 (509)
Q Consensus 499 ~~~~~~~ 505 (509)
++++..+
T Consensus 361 ~~~~~~~ 367 (369)
T PRK08153 361 EALEAAR 367 (369)
T ss_pred HHHHHhh
Confidence 8876544
No 90
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=7.2e-37 Score=314.73 Aligned_cols=284 Identities=18% Similarity=0.186 Sum_probs=222.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|++ |+.+++++.+.+.. .+.|++.. ..+||+++++++ | +++++|++|+|+++++..++..++++
T Consensus 51 ~~~~~~~~~~~~~a~~~~~~~-----~~~Y~~~~-~~~Lr~aia~~~----~--v~~e~I~it~Gs~~ai~~~~~~l~~~ 118 (370)
T PRK09105 51 NECPLGPSPAARDAAARSAAL-----SGRYDLEL-EDDLRTLFAAQE----G--LPADHVMAYAGSSEPLNYAVLAFTSP 118 (370)
T ss_pred CCCCCCCCHHHHHHHHHHHHH-----hcCCCCch-HHHHHHHHHHHh----C--cChhhEEEcCChHHHHHHHHHHHcCC
Confidence 44444 67899998877654 23487655 789999999987 3 68899999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|++++|+|..|...++..|.+++.++.++ +|.+|++.+++. .+ ++++++++|||||||.++++++
T Consensus 119 gd----~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~-----~~~~v~l~nP~NPTG~~~~~~~ 186 (370)
T PRK09105 119 TA----GLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DP-----NAGLIYICNPNNPTGTVTPRAD 186 (370)
T ss_pred CC----EEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CC-----CCCEEEEeCCCCCCCcCcCHHH
Confidence 88 999999999999999999999999999875 368899999776 33 6899999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|++.++ ++++||+||+|.+|... .+..++... ..++++++||||.| |++|+|+||++ ++++
T Consensus 187 l~~l~~~~~-~~~~lIvDEaY~~f~~~-----~s~~~~~~~------~~~vi~~~SfSK~~-g~~GlRiG~~v---~~~~ 250 (370)
T PRK09105 187 IEWLLANKP-AGSVLLVDEAYIHFSDA-----PSVVDLVAQ------RKDLIVLRTFSKLY-GMAGMRLGLAA---ARPD 250 (370)
T ss_pred HHHHHHhCC-CCcEEEEECchHHhccC-----cchHHHHhh------CCCEEEEecccHhh-cCCccceeeee---cCHH
Confidence 999998764 59999999999886531 233333221 33599999999999 89999999998 7999
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+... . ...++.+ .+.+...++. ..+++++
T Consensus 251 ~i~~l~~~-~-~~~~~~~----------------------------------~~~aa~~~L~-----------~~~~~~~ 283 (370)
T PRK09105 251 LLAKLARF-G-HNPLPVP----------------------------------AAAAGLASLR-----------DPKLVPQ 283 (370)
T ss_pred HHHHHHhc-C-CCCcCHH----------------------------------HHHHHHHHHh-----------CHHHHHH
Confidence 99988776 2 3334444 3333333332 1234778
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI 409 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 409 (509)
.++.++++++.+.+.|++. ++.+.+++++||+ +++.. ++..+...++ ++||.+
T Consensus 284 ~~~~~~~~r~~l~~~L~~~-g~~~~~~~~~f~~-~~~~~--------------~~~~l~~~L~-~~gI~v 336 (370)
T PRK09105 284 RRAENAAVREDTIAWLKKK-GYKCTPSQANCFM-VDVKR--------------PAKAVADAMA-KQGVFI 336 (370)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCCcCCCCCcEEE-EeCCC--------------CHHHHHHHHH-HCCcEE
Confidence 8889999999999999998 8888888888875 55531 2445555555 559998
No 91
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8e-37 Score=312.61 Aligned_cols=316 Identities=21% Similarity=0.319 Sum_probs=245.5
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|++ |+.+++++.+.+.. ...++|++.. ..++|+++|++++ +++++|++|+|+++++..++..++++
T Consensus 30 ~~~~~~~p~~~~~a~~~~~~~---~~~~~y~~~~-~~~lr~~ia~~~~------~~~~~i~it~G~~~~l~~~~~~l~~~ 99 (351)
T PRK14807 30 NETPFELPEEVIKNIQEIVKS---SQVNIYPDPT-AEKLREELARYCS------VVPTNIFVGNGSDEIIHLIMLAFINK 99 (351)
T ss_pred CCCCCCCCHHHHHHHHHHhhc---CcccCCCCcc-HHHHHHHHHHHhC------CCcccEEEecCHHHHHHHHHHHhcCC
Confidence 45555 68999999888865 3456687654 5899999999972 67899999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|..+...++..|++++.++.+++ |.+|++.+++.++.. ++++|++++||||||.+++.++
T Consensus 100 gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~~~~~----~~k~v~l~~p~NPtG~~~~~~~ 169 (351)
T PRK14807 100 GD----VVIYPHPSFAMYSVYSKIAGAVEIPVKLKED--YTYDVGSFIKVIEKY----QPKLVFLCNPNNPTGSVIERED 169 (351)
T ss_pred CC----EEEEeCCChHHHHHHHHHcCCeEEEeecCCC--CCCCHHHHHHHhhcc----CCCEEEEeCCCCCCCCCCCHHH
Confidence 98 9999999999999999999999999998743 689999999998753 7999999999999999999777
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+.++++ +++.++|+||+|.++. + . ...+. ... ..++|+++||||.| |+||+|+||++ ++++
T Consensus 170 l~~l~~---~~~~~~ivDe~y~~~~-~-~-~~~~~---~~~------~~~vi~~~S~SK~~-~~~GlRiG~~v---~~~~ 230 (351)
T PRK14807 170 IIKIIE---KSRGIVVVDEAYFEFY-G-N-TIVDV---INE------FENLIVLRTLSKAF-GLAGLRVGYAV---ANEN 230 (351)
T ss_pred HHHHHH---hCCCEEEEeCcchhhc-c-c-chHHH---hhh------CCCEEEEecchHhc-ccchhceeeee---cCHH
Confidence 666654 5678899999998873 2 1 22221 111 23599999999999 79999999998 8999
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+...... ...+.+ .|.++..++. + .++++
T Consensus 231 ~~~~~~~~~~~-~~~~~~----------------------------------~q~~~~~~l~---------~---~~~~~ 263 (351)
T PRK14807 231 ILKYLNLVKSP-YNINSL----------------------------------SQVIALKVLR---------T---GVLKE 263 (351)
T ss_pred HHHHHHHccCC-CCcCHH----------------------------------HHHHHHHHHh---------H---HHHHH
Confidence 99999876543 344555 4555554443 1 12455
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
.++.++++++.+.+.|++++|+.+.++ +++|+|+++. +++. +.+.|.++||.++++..+. .
T Consensus 264 ~~~~~~~~r~~l~~~l~~~~g~~~~~~-~~~~~~i~~~---------------~~~~-~~~~l~~~gV~v~~~~~~~--~ 324 (351)
T PRK14807 264 RVNYILNERERLIKELSKIPGIKVYPS-KTNFILVKFK---------------DADY-VYQGLLERGILVRDFSKVE--G 324 (351)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEECcC-CccEEEEEcC---------------CHHH-HHHHHHHCCEEEEECCCCC--C
Confidence 556778888889999988878877654 5667887664 2333 4556667899999865432 2
Q ss_pred CccccccchhhhhhhHHHHHHHh
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAK 442 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~ 442 (509)
..++||+++..++++++++++-.
T Consensus 325 ~~~~iRis~~~~~~~~~l~~~l~ 347 (351)
T PRK14807 325 LEGALRITVSSCEANDYLINGLK 347 (351)
T ss_pred CCCeEEEEcCCHHHHHHHHHHHH
Confidence 45799999999999999998764
No 92
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.8e-38 Score=319.56 Aligned_cols=300 Identities=19% Similarity=0.290 Sum_probs=236.2
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC-CCCCCeEEEcCCCChhHHHHHHh
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV-DGKKPGVLIPIPQYPLYSASLAE 123 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~~~~~Vlv~~p~y~~~~~~~~~ 123 (509)
..++|+.... .++++.+++++ | +++++|++|+|+++++..++++++++| + .|+++.|+|..|...++.
T Consensus 50 ~~~~Yp~~~~-~~l~~~~a~~~----g--~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~----~vli~~P~y~~y~~~~~~ 118 (351)
T PRK01688 50 TLNRYPECQP-KAVIENYAAYA----G--VKPEQVLVSRGADEGIELLIRAFCEPGKD----AILYCPPTYGMYSVSAET 118 (351)
T ss_pred ccccCCCCCh-HHHHHHHHHHh----C--CCHHHEEEcCCHHHHHHHHHHHhcCCCCC----EEEEcCCCHHHHHHHHHH
Confidence 4566977654 78999999887 3 689999999999999999999999886 6 999999999999999999
Q ss_pred cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcc
Q psy13922 124 FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDN 203 (509)
Q Consensus 124 ~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~ 203 (509)
.|++++.++.++ +|.+|++.+++.+ + ++++|+++|||||||..++.+++++|++.|++ +++||+||+|.+|
T Consensus 119 ~G~~~~~v~~~~--~~~~d~~~l~~~~-~-----~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f 189 (351)
T PRK01688 119 IGVEIRTVPTLD--NWQLDLPAIADNL-D-----GVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEF 189 (351)
T ss_pred cCCEEEEeecCC--CCCCCHHHHHHhc-c-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhc
Confidence 999999999865 3789999999887 3 69999999999999999999999999999976 6899999999998
Q ss_pred cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccc
Q psy13922 204 VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLP 283 (509)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 283 (509)
... .++..+... ..++++++||||.| |++|+|+||++ +++++++.+.+....+ +.+.+
T Consensus 190 ~~~-----~s~~~~~~~------~~n~iv~rSfSK~~-glaGlRiGy~i---~~~~~i~~l~~~~~~~-~v~~~------ 247 (351)
T PRK01688 190 CPQ-----ASLAGWLAE------YPHLVILRTLSKAF-ALAGLRCGFTL---ANEEVINLLLKVIAPY-PLSTP------ 247 (351)
T ss_pred CCC-----CChHHHHhh------CCCEEEEecchHhh-cCHHHHHhHHh---CCHHHHHHHHhccCCC-CCCHH------
Confidence 632 233333332 23599999999999 89999999998 8999999998765533 34444
Q ss_pred cccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCee
Q psy13922 284 QLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSC 363 (509)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 363 (509)
.+.+...++. +...+++++.++.+.++++.+.+.|++++++..
T Consensus 248 ----------------------------~~~~a~~~L~---------~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 290 (351)
T PRK01688 248 ----------------------------VADIAAQALS---------PQGIAAMRERVAEINANRQWLIAALKEIPCVEQ 290 (351)
T ss_pred ----------------------------HHHHHHHHHh---------cchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 2222223332 111233666778888889999999999877754
Q ss_pred ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHH
Q psy13922 364 NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKA 441 (509)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~ 441 (509)
+.|.++.|+|+++. +++.+ .+.|.++||.++++..|.. ..+++|++++++++|++++++.
T Consensus 291 ~~ps~~nfi~~~~~---------------~~~~l-~~~L~~~gi~vr~~~~~~~--~~~~iRis~~~~~e~~~l~~al 350 (351)
T PRK01688 291 VFDSETNYILARFT---------------ASSAV-FKSLWDQGIILRDQNKQPG--LSNCLRITIGTREECQRVIDAL 350 (351)
T ss_pred ECCCCCcEEEEEcC---------------CHHHH-HHHHHHCCeEEEECCCcCC--CCCeEEEeCCCHHHHHHHHHhh
Confidence 44556778887664 23343 4445578999998776533 2579999999999999999874
No 93
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=310.64 Aligned_cols=283 Identities=20% Similarity=0.244 Sum_probs=220.5
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+++++.+.+.+ ..+|+++.|.+++|+++++++ + +++++|++|+|+++++..+++ + .++
T Consensus 36 ~~~~~~~~~~~~~~~-----~~~Y~~~~g~~~lr~aia~~~----~--~~~~~I~it~Ga~~al~~~~~-l-~~~----- 97 (349)
T PRK07908 36 PPEWLRERLAARLGD-----LAAYPSTEDERRARAAVAARH----G--RTPDEVLLLAGAAEGFALLAR-L-RPR----- 97 (349)
T ss_pred CCHHHHHHHHHHhhH-----hhcCCCccchHHHHHHHHHHh----C--cChhhEEECCCHHHHHHHHHh-c-CCC-----
Confidence 367899999888765 345998899999999999998 3 678999999999999999888 4 453
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.++++.|+|..+...++..|.+++.++.+++ |.+|++.+ ++ ++++++++|||||||.++|.+++. +
T Consensus 98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l----~~-----~~~~i~l~np~NPTG~~~~~~~l~---~ 163 (349)
T PRK07908 98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAV----PD-----DADLVVIGNPTNPTSVLHPAEQLL---A 163 (349)
T ss_pred eEEEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHh----cc-----CCCEEEEcCCCCCCCCCcCHHHHH---H
Confidence 6788899999999999999999999998754 68888754 33 689999999999999999976555 4
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
+|+ ++.++|+||+|.++..+ ...++.+. + ..++++++||||.| |++|+|+||++ .++++++.+.
T Consensus 164 l~~-~~~~iIvDe~y~~~~~~---~~~~l~~~--~------~~~~i~i~S~SK~~-~l~GlRiG~~~---~~~~~~~~~~ 227 (349)
T PRK07908 164 LRR-PGRILVVDEAFADAVPG---EPESLAGD--D------LPGVLVLRSLTKTW-SLAGLRVGYAL---GAPDVLARLT 227 (349)
T ss_pred HHh-cCCEEEEECcchhhccC---Cccccccc--c------CCCEEEEeeccccc-CCccceeeeee---cCHHHHHHHH
Confidence 554 57889999999998532 23333321 1 22499999999999 79999999998 7899999988
Q ss_pred HhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHH
Q psy13922 266 KSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLK 345 (509)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (509)
+.... +..+.+ .+.++..++. ....++++++++.++
T Consensus 228 ~~~~~-~~~~~~----------------------------------~~~a~~~~~~---------~~~~~~~~~~~~~~~ 263 (349)
T PRK07908 228 RGRAH-WPVGTL----------------------------------QLEAIAACCA---------PRAVAEAAADAARLA 263 (349)
T ss_pred hcCCC-CCccHH----------------------------------HHHHHHHHhc---------ccchHHHHHHHHHHH
Confidence 76543 333444 3344443332 112234677889999
Q ss_pred HHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 346 QRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 346 ~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++++.+.+.|+++ ++++.+|.+++|+|++++ +.+ .+.+.++++||.+.||..|+.
T Consensus 264 ~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~---------------~~~-~~~~~l~~~gI~v~~g~~f~~ 318 (349)
T PRK07908 264 ADRAEMVAGLRAV-GARVVDPAAAPFVLVRVP---------------DAE-LLRKRLRERGIAVRRGDTFPG 318 (349)
T ss_pred HHHHHHHHHHHhC-CcEeccCCCceEEEEECC---------------cHH-HHHHHHHhCCEEEEECCCCCC
Confidence 9999999999998 888888889999998765 122 356778889999999998854
No 94
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-36 Score=312.08 Aligned_cols=291 Identities=16% Similarity=0.270 Sum_probs=223.5
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.+++ |+.+++++... ...+.|++. +..+||++++++++ +++++|++|+|+++++..++..++++
T Consensus 60 n~~p~~~~~~v~~a~~~~------~~~~~Yp~~-~~~~lr~~ia~~~~------~~~~~I~~t~Ga~~~i~~~~~~~~~~ 126 (380)
T PLN03026 60 NENPYGPPPEVLEALGNM------KFPYVYPDP-ESRRLRAALAEDSG------LESENILVGCGADELIDLLMRCVLDP 126 (380)
T ss_pred CCCCCCCCHHHHHHHHhh------HhhccCCCC-CHHHHHHHHHHHhC------cChhhEEEcCCHHHHHHHHHHHhcCC
Confidence 44443 56777776432 123448654 67899999999983 67899999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..|...++..|++++.++.++ +|.+|++.|++.+... ++++|++++||||||.+++.++
T Consensus 127 gd----~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~----~~~~v~l~~P~NPTG~~~~~~~ 196 (380)
T PLN03026 127 GD----KIIDCPPTFGMYVFDAAVNGAEVIKVPRTP--DFSLDVPRIVEAVETH----KPKLLFLTSPNNPDGSIISDDD 196 (380)
T ss_pred CC----EEEEcCCChHHHHHHHHHcCCEEEEeecCC--CCCcCHHHHHHHHhcc----CCcEEEEeCCCCCCCCCCCHHH
Confidence 98 999999999999999999999999999854 4789999999998432 7999999999999999999998
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|++++ ++||+||+|.+|.+.+ +....... ..++|+++||||.| |++|+|+||++ ++++
T Consensus 197 l~~l~~~~----~~vi~DeaY~~~~~~~-----~~~~~~~~------~~~viv~~SfSK~~-glaGlRiGy~~---~~~~ 257 (380)
T PLN03026 197 LLKILELP----ILVVLDEAYIEFSTQE-----SRMKWVKK------YDNLIVLRTFSKRA-GLAGLRVGYGA---FPLS 257 (380)
T ss_pred HHHHHhcC----CEEEEECcchhhcCCc-----chHHHHHh------CCCEEEEecchHhh-cCccccceeee---cCHH
Confidence 88888753 8999999999987532 11122211 24599999999999 89999999998 8999
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+.+.... ++.+.+ .|.++..++.. . +++++
T Consensus 258 ~i~~l~~~~~~-~~~~~~----------------------------------~q~aa~~aL~~--------~---~~~~~ 291 (380)
T PLN03026 258 IIEYLWRAKQP-YNVSVA----------------------------------AEVAACAALSN--------P---KYLED 291 (380)
T ss_pred HHHHHHHhcCC-CCCCHH----------------------------------HHHHHHHHhhC--------H---HHHHH
Confidence 99999877653 345555 45555444431 1 23677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAG 414 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~ 414 (509)
.++.++++++.+.+.|++++++.+ .+.+++|+|+++.- +. ++.++. ..|.++||.++++..
T Consensus 292 ~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~-----------~~-~~~~~~-~~l~~~gI~v~~~~~ 352 (380)
T PLN03026 292 VKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTS-----------GR-DAKKLK-EDLAKMGVMVRHYNS 352 (380)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCC-----------CC-CHHHHH-HHHHHCCeEEEECCC
Confidence 888999999999999998854554 56677888876641 11 344544 444478999998754
No 95
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-36 Score=309.56 Aligned_cols=317 Identities=18% Similarity=0.267 Sum_probs=241.9
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|++ |+.+.+++.+.+.. . ..+|++. |.++||+++|++++ +++++|++|+|+++++.+++++++++
T Consensus 32 ~~~~~~~~~~~~~a~~~~~~~---~-~~~y~~~-~~~~lr~aia~~~~------~~~~~I~it~G~~~al~~~~~~l~~~ 100 (353)
T PRK05387 32 NENPYPPSPKVLEAIRAALGD---D-LRLYPDP-NADALRQAIAAYYG------LDPEQVFVGNGSDEVLAHAFLAFFNH 100 (353)
T ss_pred CCCCCCCCHHHHHHHHHHhhh---h-hhcCCCC-cHHHHHHHHHHHhC------CCHHHEEEcCCHHHHHHHHHHHhcCC
Confidence 45555 56888888887775 2 3459766 55999999999983 67899999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..|...++..|.+++.++.++ +|.+|++.++ + ..+++++++||||||.++|.++
T Consensus 101 gd----~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~----~-----~~~~v~~~~P~NPtG~~~~~~~ 165 (353)
T PRK05387 101 DR----PLLFPDITYSFYPVYAGLYGIPYEEIPLDD--DFSIDVEDYL----R-----PNGGIIFPNPNAPTGIALPLAE 165 (353)
T ss_pred CC----EEEEeCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHH----h-----cCCEEEEeCCCCCCCCCCCHHH
Confidence 98 999999999999999999999999999864 3688999885 2 3678899999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++++ ++++|+||+|.+|. +. . ...+... ..++++++||||.| |++|+|+||++ ++++
T Consensus 166 ~~~l~~~~~--~~~livDe~y~~~~--~~-~---~~~~~~~------~~~~i~~~S~SK~~-~~~GlR~G~~~---~~~~ 227 (353)
T PRK05387 166 IERILAANP--DSVVVIDEAYVDFG--GE-S---AIPLIDR------YPNLLVVQTFSKSR-SLAGLRVGFAI---GHPE 227 (353)
T ss_pred HHHHHHhCC--CcEEEEeCcccccC--Cc-c---hHHHHhh------CCCEEEEEehhHhh-cchhhhceeee---cCHH
Confidence 999988653 99999999998763 21 1 1122111 23489999999999 79999999998 7999
Q ss_pred HHHHHHHhhhc--ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 260 VKAMLHKSISA--MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 260 ~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
+++++.+.... .++.+.+ .|.++..++.. . ++.
T Consensus 228 ~~~~l~~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~~--------~---~~~ 262 (353)
T PRK05387 228 LIEALNRVKNSFNSYPLDRL----------------------------------AQAGAIAAIED--------E---AYF 262 (353)
T ss_pred HHHHHHHhhccCCCCCcCHH----------------------------------HHHHHHHHhcC--------H---HHH
Confidence 99999877642 2345555 55555444431 1 235
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++.++.+.++++.+.+.|+++ |+.+. +.+++|+|++++ +. ++.+++ +.|.++||.+++ |..
T Consensus 263 ~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~------------~~-~~~~~~-~~l~~~gi~v~~---~~~ 323 (353)
T PRK05387 263 EETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHP------------SH-DAAELA-AKLRERGIIVRH---FNK 323 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECC------------CC-CHHHHH-HHHHHCCEEEEE---CCC
Confidence 667788889999999999998 77765 456678887654 11 344544 445678999974 322
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
. ...+ ++|++++ +++++++++++|
T Consensus 324 ~-----------------------------------------------~~~~--------~iRis~~-~~~~~~~~~~~L 347 (353)
T PRK05387 324 P-----------------------------------------------RIDQ--------FLRITIG-TDEEMEALVDAL 347 (353)
T ss_pred C-----------------------------------------------CCCC--------eEEEEeC-CHHHHHHHHHHH
Confidence 0 1112 8999998 568899999999
Q ss_pred HHHHH
Q psy13922 498 REFHE 502 (509)
Q Consensus 498 ~~~~~ 502 (509)
++++.
T Consensus 348 ~~~~~ 352 (353)
T PRK05387 348 KEILA 352 (353)
T ss_pred HHHhh
Confidence 88764
No 96
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=278.34 Aligned_cols=378 Identities=20% Similarity=0.273 Sum_probs=279.5
Q ss_pred hHHHHHHHHhhc----CCCCC----CCCCCCHHHHHH----HHHHHhcc-cCCCcccCCCCcchHHHHHHHHHHHhhhcC
Q psy13922 5 FSLSLQVLALVS----LPQLF----DDPRFPDDVKQR----AQAVLDGC-RGQSVGSYTDSPGIEIIRRHVAQYISRRDG 71 (509)
Q Consensus 5 ~~~~~~~~~~~~----~~~~~----~~~~~p~~v~~a----~~~~l~~~-~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g 71 (509)
-|+++++|.+.. .|+.+ |+|..-|++.+. ..+.+.+. ......+|..++|...|.+++++.++++||
T Consensus 13 ~sGi~~lMdDl~d~Lrt~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 13 HSGITQLMDDLNDGLRTPGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred hhhHHHHHHHHHhhccCCCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 468889988774 57755 677653443333 33344432 133456799999999999999999999999
Q ss_pred CCCCCCcEEEeCCHHHHHHHHHHHhhcC-CCCCCCeEEEc-CCCChhHHHHHHhcCCEEEEEe----cCCC--CCCCCCH
Q psy13922 72 QPADWQDVILSAGASDGIKSVLKLLIED-VDGKKPGVLIP-IPQYPLYSASLAEFNMEQIGYY----LDES--KQWGLPI 143 (509)
Q Consensus 72 ~~~~~~~i~~t~G~~~al~~~~~~l~~~-gd~~~~~Vlv~-~p~y~~~~~~~~~~g~~~~~v~----~~~~--~~~~~d~ 143 (509)
|+++++||.+|+|++.++..++..|... .|+..+.|+.| .|.|.+|.++.-.-.. .+.+. +.+. .+|++|.
T Consensus 93 wnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~-fVs~kP~iel~~~g~FKY~vDF 171 (417)
T COG3977 93 WNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDL-FVSAKPNIELLPAGQFKYHVDF 171 (417)
T ss_pred CCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccc-eeeccCCcccccccceeeccCH
Confidence 9999999999999999999999998543 23334456665 8999998765322111 12221 1222 3568898
Q ss_pred HHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCC
Q psy13922 144 SELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGE 223 (509)
Q Consensus 144 ~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~ 223 (509)
++|. +.+ .+.+|+++.|.||||.+++++|+.+|.++|++||+.+|+|.+|+. +++.+. +.++..
T Consensus 172 ~~l~--i~e-----~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-------PFP~ii--fsd~~~ 235 (417)
T COG3977 172 EHLH--IGE-----STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-------PFPGII--FSDATP 235 (417)
T ss_pred HHcc--ccc-----ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-------CCCcee--cccccc
Confidence 8885 344 699999999999999999999999999999999999999999975 232221 111111
Q ss_pred CCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHh
Q psy13922 224 PYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAV 302 (509)
Q Consensus 224 ~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (509)
.+ +.|++.+.|+||. |+||.|+|.++ ++++++..+.+... ....++..
T Consensus 236 ~w-~~NiilC~SLSK~--GLPG~R~GIiI---ane~viqaitnmn~iisLap~~~------------------------- 284 (417)
T COG3977 236 LW-NENIILCMSLSKL--GLPGSRCGIII---ANEKVIQAITNMNGIISLAPGRM------------------------- 284 (417)
T ss_pred cC-CCCEEEEeehhhc--CCCCcceeEEE---ccHHHHHHHHhccceeeecCCCc-------------------------
Confidence 11 3468999999998 89999999998 99999999988766 34455555
Q ss_pred hhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC--CCeeccCCceeEEeecCCCC
Q psy13922 303 LDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS-IE--GMSCNPVQGAMYAFPQMKLP 379 (509)
Q Consensus 303 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~--g~~~~~~~~g~~~~~~~~~~ 379 (509)
+++.+..+++ ++...+.. -+-.+..++.+.+.....|+. +| .+.++.|+|.+|+|+-|+
T Consensus 285 ---------G~Aia~~mie-----~gdl~rls--eqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~-- 346 (417)
T COG3977 285 ---------GPAIAAEMIE-----SGDLLRLS--EQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFK-- 346 (417)
T ss_pred ---------cHHHHHHHhh-----cchHHHHH--HHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhc--
Confidence 6666666666 33343332 234556677777777777766 44 356679999999998775
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhc
Q psy13922 380 AKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLER 459 (509)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (509)
.+..+.......|++.|+.++||+.|.+
T Consensus 347 ----------dLPItt~~LYq~LKa~Gvl~VPG~~FFp------------------------------------------ 374 (417)
T COG3977 347 ----------DLPITTEELYQRLKARGVLMVPGHYFFP------------------------------------------ 374 (417)
T ss_pred ----------cCCCCHHHHHHHHHhCeEEEecccccCC------------------------------------------
Confidence 2223333367889999999999999987
Q ss_pred ccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHHHHHhh
Q psy13922 460 TGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
|....|++.+.|+|+++..++++|++++.+|.+.+++..++
T Consensus 375 -------Gl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~yq~ 415 (417)
T COG3977 375 -------GLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVERAYQE 415 (417)
T ss_pred -------CCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 44466788899999999999999999999999999988775
No 97
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.6e-35 Score=304.86 Aligned_cols=294 Identities=17% Similarity=0.281 Sum_probs=229.6
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+++++.+.+.. ..+|++..+ .++|++++++++ +++++|++|+|+++++..++..++++||
T Consensus 46 ~~~~~~~a~~~~~~~-----~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~t~G~~~~l~~~~~~l~~~gd---- 109 (367)
T PRK02731 46 PSPKAIEAIRAAADE-----LHRYPDGSG-FELKAALAEKFG------VDPERIILGNGSDEILELLARAYLGPGD---- 109 (367)
T ss_pred CCHHHHHHHHHHHHh-----hcCCCCCcH-HHHHHHHHHHhC------cCHHHEEEcCCHHHHHHHHHHHhcCCCC----
Confidence 367788888887754 345887665 789999999982 5678999999999999999999998888
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.|+++.|+|..+...++..|.+++.++.+ ++.+|++.+++.+++ ++++|++++||||||.+++.+++.+|++
T Consensus 110 ~vl~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~~~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~ 181 (367)
T PRK02731 110 EVIYSEHGFAVYPIAAQAVGAKPVEVPAK---DYGHDLDAMLAAVTP-----RTRLVFIANPNNPTGTYLPAEEVERFLA 181 (367)
T ss_pred EEEEecCCHHHHHHHHHHcCCeEEEeccc---CCCCCHHHHHHHhCC-----CCcEEEEeCCCCCCCcCCCHHHHHHHHH
Confidence 99999999999998889999999999874 368999999998875 7999999999999999999999999998
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
.|+ +|+++|+||+|.++.+++. ...++ .... . ..++++++||||.| |++|+|+||++ +++++++.+.
T Consensus 182 ~~~-~~~~li~De~y~~~~~~~~-~~~~~-~~~~-~-----~~~~i~~~S~SK~~-g~~G~RiG~l~---~~~~~~~~l~ 248 (367)
T PRK02731 182 GVP-PDVLVVLDEAYAEYVRRKD-YEDGL-ELVA-K-----FPNVVVTRTFSKAY-GLAGLRVGYGI---APPEIIDALN 248 (367)
T ss_pred hCC-CCcEEEEECcHHHhccCcC-cccHH-HHHh-h-----cCCEEEEeeehHhh-cCcccceeeee---CCHHHHHHHH
Confidence 875 6999999999999887532 22223 2221 1 23489999999999 79999999998 7899999988
Q ss_pred HhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHH
Q psy13922 266 KSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLK 345 (509)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (509)
+.... ++.+.+ .|.++..+++. .+++++.++.++
T Consensus 249 ~~~~~-~~~~~~----------------------------------~~~~a~~~l~~-----------~~~~~~~~~~~~ 282 (367)
T PRK02731 249 RVRQP-FNVNSL----------------------------------ALAAAVAALDD-----------DAFVEKSRALNA 282 (367)
T ss_pred HccCC-CCCCHH----------------------------------HHHHHHHHhCC-----------HHHHHHHHHHHH
Confidence 76543 234444 45444444431 223677888899
Q ss_pred HHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 346 QRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 346 ~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++++.+.+.|++. |+.+.+ .++.|+|++++. +. ++.+++ ..|.++||.++|+..|+.
T Consensus 283 ~~~~~l~~~L~~~-g~~~~~-~~g~~~~i~~~~-----------~~-~~~~~~-~~L~~~gI~v~~~~~~~~ 339 (367)
T PRK02731 283 EGMAWLTEFLAEL-GLEYIP-SVGNFILVDFDD-----------GK-DAAEAY-QALLKRGVIVRPVAGYGL 339 (367)
T ss_pred HHHHHHHHHHHHC-CCccCC-CCceEEEEECCC-----------CC-CHHHHH-HHHHHCCEEEEeCCCCCC
Confidence 9999999999988 777764 456788977631 11 344544 455678999999887653
No 98
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-35 Score=301.88 Aligned_cols=304 Identities=17% Similarity=0.259 Sum_probs=233.3
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|++ |+.+++++.+.+.. +.++.|++. |.++||+++++++++.+ +++++|++|+|++++|..+++.+
T Consensus 27 ~~~~~~~p~~~~~~~~~~~~~---~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~i~~~~~~~--- 96 (335)
T PRK14808 27 NENPFPFPEDLVDEVFRRLNS---DTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMF--- 96 (335)
T ss_pred CCCCCCCCHHHHHHHHHHhhh---hhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHHHHHHHHHh---
Confidence 56666 67899998887765 445557655 78999999999997652 68999999999999999999888
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
| .|+++.|+|..|...++..|++++.+|.+++ +.++... + + ++++++++|||||||.++|+++
T Consensus 97 -d----~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~----~-~-----~~~~i~i~nP~NPTG~~~s~~~ 159 (335)
T PRK14808 97 -D----RSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN----V-G-----EGDVVFIPNPNNPTGHVFEREE 159 (335)
T ss_pred -C----cEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH----c-c-----CCCEEEEeCCCCCCCCCcCHHH
Confidence 5 8999999999999999999999999998754 3444221 2 2 4789999999999999999998
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+ +++++||+||+|.+|. +. .. ...... ..++|+++||||.| |++|+|+||++ ++++
T Consensus 160 l~~l~----~~~~~ii~DE~Y~~f~--~~-~~---~~~~~~------~~~vi~~~S~SK~~-~l~GlRvG~~v---~~~~ 219 (335)
T PRK14808 160 IERIL----KTGAFVALDEAYYEFH--GE-SY---VDLLKK------YENLAVIRTFSKAF-SLAAQRIGYVV---SSEK 219 (335)
T ss_pred HHHHH----hcCCEEEEECchhhhc--CC-ch---HHHHHh------CCCEEEEEechhhc-cCcccceEEEE---eCHH
Confidence 88886 4799999999999974 21 22 222222 22599999999999 79999999998 7899
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+.+... .++.+.+ .|.++..+++ ..++..+
T Consensus 220 ~~~~l~~~~~-~~~~~~~----------------------------------~q~a~~~~l~-----------~~~~~~~ 253 (335)
T PRK14808 220 FIDAYNRVRL-PFNVSYV----------------------------------SQMFAKVALD-----------HREIFEE 253 (335)
T ss_pred HHHHHHHhcC-CCCCCHH----------------------------------HHHHHHHHHh-----------CHHHHHH
Confidence 9999987663 3455566 4555444443 1123556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
.++.+.++++.+.+.|++. |+.+.+++|+ |+|+++.. . +... +.+.|.++||.+++ |
T Consensus 254 ~~~~~~~~r~~l~~~L~~~-g~~~~~~~g~-f~~~~l~~------------~-~~~~-~~~~l~~~Gi~V~~---~---- 310 (335)
T PRK14808 254 RTKFIVEERERMKSALREM-GYRITDSRGN-FVFIFMEK------------E-EKER-LLEHLRAKNIAVRS---F---- 310 (335)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCEECCCCCe-EEEEeCCC------------c-cHHH-HHHHHHHCCeEEEE---C----
Confidence 6677778888999999988 8888888665 55866641 1 1233 46677788999994 3
Q ss_pred CccccccchhhhhhhHHHHHHHh
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAK 442 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~ 442 (509)
.+++|++++.+++|++++++..
T Consensus 311 -~~~~Risi~~~~~~~~~~~~l~ 332 (335)
T PRK14808 311 -REGVRITIGKREENDMILKELE 332 (335)
T ss_pred -CCCeEEecCCHHHHHHHHHHHH
Confidence 2589999999999999998764
No 99
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=3.2e-35 Score=300.18 Aligned_cols=295 Identities=22% Similarity=0.375 Sum_probs=231.0
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.+.+ |+.+++++.+++.. ..+|+++.+ +++|++++++++ +++++|++|+|+++++..++.+++++
T Consensus 27 ~~~~~~~~~~~~~a~~~~~~~-----~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~~~G~~~~l~~~~~~l~~~ 94 (346)
T TIGR01141 27 NENPFGPPPKAKEALRAEADK-----LHRYPDPDP-AELKQALADYYG------VDPEQILLGNGSDEIIELLIRAFLEP 94 (346)
T ss_pred CCCCCCCCHHHHHHHHHhHHH-----hhcCCCCCH-HHHHHHHHHHhC------cChHHEEEcCCHHHHHHHHHHHhcCC
Confidence 45554 67899999887644 235888777 899999999994 56789999999999999999999988
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|..+...++..|++++.++.+++ +.+|++.+++.+.. ++++|++++|+||||.+++.++
T Consensus 95 gd----~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~-----~~~~v~l~~p~NptG~~~~~~~ 163 (346)
T TIGR01141 95 GD----AVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDD-----KPKLVFLCSPNNPTGNLLSRSD 163 (346)
T ss_pred CC----EEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCC-----CCCEEEEeCCCCCCCCCCCHHH
Confidence 88 9999999999998889999999999998765 57899999998755 7999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+.++++.|+ +|+++|+|++|.++...+ +....... ..++++++|+||.+ |++|+|+||++ .+++
T Consensus 164 ~~~l~~~~~-~~~~ii~D~~y~~~~~~~-----~~~~~~~~------~~~~i~~~S~sK~~-g~~G~r~G~~~---~~~~ 227 (346)
T TIGR01141 164 IEAVLERTP-EDALVVVDEAYGEFSGEP-----STLPLLAE------YPNLIVLRTLSKAF-GLAGLRIGYAI---ANAE 227 (346)
T ss_pred HHHHHHhCC-CCcEEEEECchhhhcCCc-----cHHHHHhh------CCCEEEEehhhHhh-hchhhhceeee---cCHH
Confidence 999999887 799999999999776431 11111111 12489899999999 78999999998 7899
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++++...... .+.+.+ .|.++..+++. . .+.++
T Consensus 228 ~~~~~~~~~~~-~~~~~~----------------------------------~~~~~~~~l~~--------~---~~~~~ 261 (346)
T TIGR01141 228 IIDALNKVRAP-FNLSRL----------------------------------AQAAAIAALRD--------D---DFIEK 261 (346)
T ss_pred HHHHHHhccCC-CCCCHH----------------------------------HHHHHHHHhCC--------H---HHHHH
Confidence 99998876543 334444 34444333330 1 14677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
.++.++++++.+.+.|.+++|+++.+ .+++|+|++++ + ++++++ ..|.++||.+.||..|+.
T Consensus 262 ~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~------------~--~~~~~~-~~L~~~gI~v~~g~~f~~ 323 (346)
T TIGR01141 262 TVEEINAERERLYDGLKKLPGLEVYP-SDANFVLIRFP------------R--DADALF-EALLEKGIIVRDLNSYPG 323 (346)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEECC-CcCCEEEEecC------------C--CHHHHH-HHHHHCCeEEEeCCCcCC
Confidence 88899999999999999888888654 45678887665 1 244444 455578999999988754
No 100
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-35 Score=302.54 Aligned_cols=270 Identities=19% Similarity=0.320 Sum_probs=209.3
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC-CCCCCeEEEcCCCChhHHHHHHhc
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV-DGKKPGVLIPIPQYPLYSASLAEF 124 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~~~~~Vlv~~p~y~~~~~~~~~~ 124 (509)
.++|++.. ..+||+++|+++ | +++++|++|+|+++++.+++++++++| | .|+++.|+|..|...++..
T Consensus 54 ~~~Yp~~~-~~~Lr~aia~~~----~--~~~~~I~it~Gs~~~i~~~~~~~~~~g~d----~vlv~~P~y~~y~~~~~~~ 122 (354)
T PRK04635 54 LNRYPECQ-PPELINAYSAYA----G--VAPEQILTSRGADEAIELLIRAFCEPGQD----SIACFGPTYGMYAISAETF 122 (354)
T ss_pred hccCCCCC-HHHHHHHHHHHh----C--cCHHHEEEeCCHHHHHHHHHHHhcCCCCC----eEEEcCCChHHHHHHHHHc
Confidence 45598764 699999999987 3 789999999999999999999999888 7 9999999999999999999
Q ss_pred CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCccc
Q psy13922 125 NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204 (509)
Q Consensus 125 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~ 204 (509)
|++++.+|.+++ |.+|++.++. + . ++++|+++|||||||.+++.+++++|+++|+ +++||+||+|.+|.
T Consensus 123 g~~v~~v~~~~~--~~~~~~~l~~-~-~-----~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~ 191 (354)
T PRK04635 123 NVGVKALPLTAD--YQLPLDYIEQ-L-D-----GAKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFC 191 (354)
T ss_pred CCEEEEEecCCC--CCCCHHHHHh-c-c-----CCCEEEEeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhc
Confidence 999999998743 6889988863 3 3 7999999999999999999999999999876 49999999999876
Q ss_pred ccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhcccc
Q psy13922 205 YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQ 284 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 284 (509)
.. .+..++... ..++++++||||.| |++|+|+||++ +++++++.+.+.... .+.+.+
T Consensus 192 ~~-----~s~~~~~~~------~~~~iv~~S~SK~~-~l~GlRlG~~i---~~~~~~~~l~~~~~~-~~~~~~------- 248 (354)
T PRK04635 192 PE-----YSVADLLAS------YPNLVVLRTLSKAF-ALAGARCGFTL---ANEELIEILMRVIAP-YPVPLP------- 248 (354)
T ss_pred cC-----cchHHHHhh------CCCEEEEechHHHh-hhhHHHHhhhh---CCHHHHHHHHhhcCC-CCCCHH-------
Confidence 32 233333222 23489999999999 79999999998 799999998765543 334444
Q ss_pred ccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec
Q psy13922 285 LFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN 364 (509)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 364 (509)
.+.+...++. +...+++++.++.++++++.+.+.|++++++++.
T Consensus 249 ---------------------------~~~~a~~~l~---------~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 292 (354)
T PRK04635 249 ---------------------------VSEIATQALS---------EAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL 292 (354)
T ss_pred ---------------------------HHHHHHHHHh---------cccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC
Confidence 2222222222 0112235666778899999999999998668877
Q ss_pred cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 365 PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 365 ~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
+++| .|+|++++ +... +.+.++++||.++++.
T Consensus 293 ~~~g-~f~~~~~~---------------~~~~-~~~~l~~~gv~v~~~~ 324 (354)
T PRK04635 293 EGNG-NYVLAKFD---------------DVDA-VFKALWDAGIVARAYK 324 (354)
T ss_pred CCCC-cEEEEECC---------------CHHH-HHHHHHHCCEEEEECC
Confidence 7765 57776664 1233 3567788999998643
No 101
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-35 Score=297.12 Aligned_cols=302 Identities=19% Similarity=0.309 Sum_probs=231.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ |+.+++++.+++.. .....|++ .|.+++|++++++++ +++++|++|+|+++++..++..+ +
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~---~~~~~Y~~-~g~~~lr~~ia~~~~------~~~~~I~~t~G~~~~l~~~~~~~--~ 93 (337)
T PRK03967 26 NENPFDLPEELKEEIFEELKR---VPFNRYPH-ITSDPLREAIAEFYG------LDAENIAVGNGSDELISYLVKLF--E 93 (337)
T ss_pred CCCCCCCCHHHHHHHHHHhhc---CccccCCC-CCHHHHHHHHHHHhC------cCcceEEEcCCHHHHHHHHHHHh--C
Confidence 34444 57899998888865 23556864 688999999999993 67899999999999999988877 6
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|..|...++..|.+++.++.++ +|.+|++.+++.+ . +++++++++||||||.+++.++
T Consensus 94 gd----~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~-~-----~~~~v~~~~P~NPtG~~~~~~~ 161 (337)
T PRK03967 94 GK----HIVITPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGERIAEKA-K-----NASAVFICSPNNPTGNLQPEEE 161 (337)
T ss_pred CC----eEEEeCCChHHHHHHHHHcCCeEEEeecCC--CCCcCHHHHHHhc-c-----CCCEEEEeCCCCCCCCCCCHHH
Confidence 77 999999999999988999999999999874 3689999998764 2 6889999999999999999777
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+.+++ ++++++|+||+|.+|... .. ...... ..++|+++||||.| |+||+|+||++ ++++
T Consensus 162 l~~i~----~~~~~ii~De~y~~~~~~---~~---~~~~~~------~~~vi~l~S~SK~~-~l~GlRiG~iv---~~~~ 221 (337)
T PRK03967 162 ILKVL----ETGKPVVLDEAYAEFSGK---SL---IGLIDE------YPNLILLRTFSKAF-GLAGIRAGYAI---ANEE 221 (337)
T ss_pred HHHHH----hcCCEEEEECchhhhccc---ch---HHHHhh------CCCEEEEecchHhh-cchhhhheeee---cCHH
Confidence 66654 479999999999987521 12 222111 23499999999999 79999999998 7899
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+.+.... ++.+.+ .|.++..++.. .+ +..+
T Consensus 222 ~i~~~~~~~~~-~~~~~~----------------------------------~q~~~~~~l~~-------~~----~~~~ 255 (337)
T PRK03967 222 IIDALYRIKPP-FSLNIL----------------------------------TMKIVRLALDH-------YD----LIEE 255 (337)
T ss_pred HHHHHHhhcCC-CCCCHH----------------------------------HHHHHHHHHhC-------HH----HHHH
Confidence 99999887653 355666 56665555431 11 2444
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
.++.+.++++.+.+.|.+. ..+.+++|+|+++. +...|.++||.++++...
T Consensus 256 ~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~~--------------------~~~~l~~~gi~v~~~~~~---- 306 (337)
T PRK03967 256 RIDYIIKERERVRRELGEY-----AYPSDANFLLLKLD--------------------AYDYLLENGIVVRKLSGR---- 306 (337)
T ss_pred HHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhHH--------------------HHHHHHHCCEEEEeCCCC----
Confidence 4455566777788888764 23578889996553 235555679999986532
Q ss_pred CccccccchhhhhhhHHHHHHHh
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAK 442 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~ 442 (509)
..+++|++++.+.++++++++..
T Consensus 307 ~~~~~Ri~~~~~~~~~~l~~~l~ 329 (337)
T PRK03967 307 LEGHIRVTVGKREENDEFIKALK 329 (337)
T ss_pred CCCeEEEecCCHHHHHHHHHHHH
Confidence 34699999999999999998764
No 102
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.2e-34 Score=295.71 Aligned_cols=316 Identities=18% Similarity=0.312 Sum_probs=236.8
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE-eCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL-SAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~-t~G~~~al~~~~~~l~~ 98 (509)
+.+++ |+.+++++.+.+.. ...|++..+ +++|+++++++ | +++++|++ |+|+++++..+++.+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-----~~~y~~~~~-~~lr~~ia~~~----~--~~~~~i~~~~~Ga~~~i~~~~~~~~~ 109 (361)
T PRK00950 42 NENPLGPSPKAVEAIEKELSK-----IHRYPEPDA-PELREALSKYT----G--VPVENIIVGGDGMDEVIDTLMRTFID 109 (361)
T ss_pred CCCCCCCCHHHHHHHHHHHHh-----hcCCCCCCH-HHHHHHHHHHh----C--CCHHHEEEeCCCHHHHHHHHHHHhcC
Confidence 44444 56788888777665 234877665 89999999998 3 57889999 79999999999999988
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| .|+++.|+|..+...++..|++++.++.++ +|.+|++.+++.+.. +++++++++|+||||.+++.+
T Consensus 110 ~gd----~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~l~~~~~~-----~~~~v~~~~p~nptG~~~~~~ 178 (361)
T PRK00950 110 PGD----EVIIPTPTFSYYEISAKAHGAKPVYAKREE--DFSLDVDSVLNAITE-----KTKVIFLCTPNNPTGNLIPEE 178 (361)
T ss_pred CCC----EEEEcCCChHHHHHHHHHcCCEEEEeecCC--CCCcCHHHHHHHhcc-----CCCEEEEeCCCCCCCCCcCHH
Confidence 888 999999999999999999999999998543 478999999998876 789999999999999999966
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++.+ +|+++|+++|+||+|.+|. + . .. ..+..+ ..++++++||||.+ |++|+|+||++ .++
T Consensus 179 ~l~~---l~~~~~~~li~De~y~~~~-~-~-~~---~~~~~~------~~~vi~~~S~SK~~-g~~GlRiG~~~---~~~ 239 (361)
T PRK00950 179 DIRK---ILESTDALVFVDEAYVEFA-E-Y-DY---TPLALE------YDNLIIGRTFSKVF-GLAGLRIGYGF---VPE 239 (361)
T ss_pred HHHH---HHHHCCcEEEEECchhhhC-c-c-ch---HHHHHh------cCCEEEEEeehHhh-cCchhhcchhc---CCH
Confidence 5555 5668899999999999875 1 1 12 222222 12489999999999 79999999998 799
Q ss_pred HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 259 GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 259 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
++++.+.+....+ +.+.+ .+.++..++.. . ++++
T Consensus 240 ~~~~~~~~~~~~~-~~~~~----------------------------------~~~~a~~~l~~--------~---~~~~ 273 (361)
T PRK00950 240 WLIDYYMRAKTPF-SLTRL----------------------------------SQAAAIAALSD--------K---EYIE 273 (361)
T ss_pred HHHHHHHHhcCCC-CCCHH----------------------------------HHHHHHHHhcC--------H---HHHH
Confidence 9999888765533 34444 34333333321 1 2356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
+.++.++++++.+.+.|+ +.+. +.+++|+|+++. +. ++.+++..+ .++||.++||..|..
T Consensus 274 ~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~------------~~-~~~~~~~~l-~~~gv~v~~~~~f~~- 333 (361)
T PRK00950 274 KSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVT------------PM-TAKEFCEEL-LKRGVIVRDCTSFRG- 333 (361)
T ss_pred HHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECC------------CC-CHHHHHHHH-HHCCEEEeeCCccCC-
Confidence 677778888888887775 3443 456788897773 21 345544454 467999999887754
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
.+.+ ++|+|++ ++++++++++.|+
T Consensus 334 -----------------------------------------------~~~~--------~lRis~~-~~~~~~~l~~~L~ 357 (361)
T PRK00950 334 -----------------------------------------------LGDY--------YIRVSIG-TFEENERFLEILK 357 (361)
T ss_pred -----------------------------------------------CCCC--------eEEEECC-CHHHHHHHHHHHH
Confidence 2323 8999998 5678888888888
Q ss_pred HHH
Q psy13922 499 EFH 501 (509)
Q Consensus 499 ~~~ 501 (509)
+++
T Consensus 358 ~il 360 (361)
T PRK00950 358 EIV 360 (361)
T ss_pred HHh
Confidence 765
No 103
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=1.4e-34 Score=296.12 Aligned_cols=316 Identities=19% Similarity=0.275 Sum_probs=240.2
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ |+.+.+++.+.+.. ...|+ ..|..++|++++++++ +++++|++|+|+++++..++..++++
T Consensus 30 ~~~~~~~~~~~~~a~~~~~~~-----~~~y~-~~g~~~lr~~ia~~~~------~~~~~I~~~~G~~~~l~~~~~~~~~~ 97 (352)
T PRK03321 30 NETPFGPLPSVRAAIARAAAG-----VNRYP-DMGAVELRAALAEHLG------VPPEHVAVGCGSVALCQQLVQATAGP 97 (352)
T ss_pred CCCCCCCCHHHHHHHHHHHHh-----cCcCC-CCcHHHHHHHHHHHhC------cCHHHEEECCCHHHHHHHHHHHhcCC
Confidence 44554 56888888877654 34475 4688999999999993 67889999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| .|+++.|+|..+...++..|.+++.++.+++ +.+|++.+++.++. +++++++++||||||.+++.++
T Consensus 98 gd----~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~ 166 (352)
T PRK03321 98 GD----EVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITD-----RTRLIFVCNPNNPTGTVVTPAE 166 (352)
T ss_pred CC----EEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhcc-----CCCEEEEeCCCCCcCCCcCHHH
Confidence 98 9999999999998889999999999998744 58899999998876 7999999999999999999888
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+.++++.+ +++++||+||+|.++.+++. ...++..+. . ..++++++||||.| |++|+|+||++ ++++
T Consensus 167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~-~~~~~~~~~-~------~~~vi~~~S~SK~~-g~~GlRiG~~v---~~~~ 233 (352)
T PRK03321 167 LARFLDAV-PADVLVVLDEAYVEYVRDDD-VPDGLELVR-D------HPNVVVLRTFSKAY-GLAGLRVGYAV---GHPE 233 (352)
T ss_pred HHHHHHhC-CCCeEEEEechHHHhccCcC-CCcHHHHHh-h------CCCEEEEecchHHh-hhHHHhhhhhc---CCHH
Confidence 88888865 47999999999999987542 222222221 1 23599999999999 79999999998 7899
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+.+... ..+.+.+ .|.++..++.. .+.+ .+.
T Consensus 234 ~~~~~~~~~~-~~~~s~~----------------------------------~q~~a~~~l~~-------~~~~---~~~ 268 (352)
T PRK03321 234 VIAALRKVAV-PFSVNSL----------------------------------AQAAAIASLAA-------EDEL---LER 268 (352)
T ss_pred HHHHHHHhcC-CCCCCHH----------------------------------HHHHHHHHhcC-------HHHH---HHH
Confidence 9999987643 3455565 44333323220 1222 222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
+ +.+.++++.+.+.|++. ++.+.++ +|+|+|+++.. .+..+ .+.|+++||.++| |+
T Consensus 269 ~-~~~~~~r~~~~~~L~~~-~~~~~~~-~g~~i~i~l~~--------------~~~~~-~~~l~~~gI~v~~---~~--- 324 (352)
T PRK03321 269 V-DAVVAERDRVRAALRAA-GWTVPPS-QANFVWLPLGE--------------RTADF-AAAAAEAGVVVRP---FA--- 324 (352)
T ss_pred H-HHHHHHHHHHHHHHHHC-CCccCCC-CCCEEEEeCCC--------------CHHHH-HHHHHHCCEEEEc---cC---
Confidence 2 33345567788888887 7765444 57889976631 23444 4456789999987 43
Q ss_pred CccccccchhhhhhhHHHHHHHhh
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAKA 443 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~~ 443 (509)
.+++|+++..++++++++++...
T Consensus 325 -~~~iRi~~~~~~~~~~~~~al~~ 347 (352)
T PRK03321 325 -GEGVRVTIGAPEENDAFLRAARA 347 (352)
T ss_pred -CCcEEEeeCCHHHHHHHHHHHHH
Confidence 25799999999999999998754
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=1.1e-33 Score=286.96 Aligned_cols=267 Identities=20% Similarity=0.257 Sum_probs=210.8
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF 124 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~ 124 (509)
.+.+|+++.+ +++|+.+++++ | +++++|++|+|+++++..++..+ .+| .|+++.|+|..+...++..
T Consensus 40 ~~~~y~~~~~-~~lr~~la~~~----~--~~~~~i~~t~G~~~~i~~~~~~l-~~g-----~vl~~~p~y~~~~~~~~~~ 106 (330)
T TIGR01140 40 AWARYPDPEY-DELRAAAAAYY----G--LPAASVLPVNGAQEAIYLLPRLL-APG-----RVLVLAPTYSEYARAWRAA 106 (330)
T ss_pred HHhhCCCccH-HHHHHHHHHHh----C--CChhhEEECCCHHHHHHHHHHHh-CCC-----eEEEeCCCcHHHHHHHHHc
Confidence 4556988776 99999999998 3 56899999999999999987664 443 6999999999999999999
Q ss_pred CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCccc
Q psy13922 125 NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204 (509)
Q Consensus 125 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~ 204 (509)
|.+++.++ |++.+++.++ +++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.
T Consensus 107 g~~~~~~~---------d~~~l~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~ 171 (330)
T TIGR01140 107 GHEVVELP---------DLDRLPAALE------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFT 171 (330)
T ss_pred CCEEEEeC---------CHHHHHhhcc------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccC
Confidence 99999886 6888888873 47889999999999999999999999999999999999999999887
Q ss_pred ccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhcccc
Q psy13922 205 YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQ 284 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 284 (509)
+. .++..... ...++|+++|+||.+ |++|+|+||++ .++++++.+...... ..++.+
T Consensus 172 ~~-----~~~~~~~~------~~~~~i~~~S~SK~~-g~~G~R~G~i~---~~~~~~~~l~~~~~~-~~~s~~------- 228 (330)
T TIGR01140 172 PD-----ASLAPQAA------RFPGLVVLRSLTKFF-GLAGLRLGFVV---AHPALLARLREALGP-WTVNGP------- 228 (330)
T ss_pred Cc-----cchhhHhc------cCCCEEEEEecchhh-cCchhhhhhee---CCHHHHHHHHhcCCC-CCchHH-------
Confidence 53 12222211 123589999999999 89999999998 788999998876543 344555
Q ss_pred ccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec
Q psy13922 285 LFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN 364 (509)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 364 (509)
+|.++..+++. .. +.+..++.++++++.+.+.|++++.+++.
T Consensus 229 ---------------------------~q~~~~~~l~~--------~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 270 (330)
T TIGR01140 229 ---------------------------ARAAGRAALAD--------TA---WQAATRARLAAERARLAALLARLGGLEVV 270 (330)
T ss_pred ---------------------------HHHHHHHHHhc--------hH---HHHHHHHHHHHHHHHHHHHHHhCCCceEC
Confidence 55555555441 12 24567889999999999999998556665
Q ss_pred cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 365 PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 365 ~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+ .+++|+|+++. +..++...++ ++||.++||..|..
T Consensus 271 ~-~~~~f~~~~~~---------------~~~~l~~~l~-~~gi~v~pg~~f~~ 306 (330)
T TIGR01140 271 G-GTALFLLVRTP---------------DAAALHEALA-RRGILIRDFDNFPG 306 (330)
T ss_pred C-CCCeEEEEEcC---------------CHHHHHHHHH-HCCEEEEECCCCCC
Confidence 4 46789997665 2345454554 57999999999854
No 105
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.4e-33 Score=286.07 Aligned_cols=249 Identities=16% Similarity=0.216 Sum_probs=191.7
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEE
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQ 128 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~ 128 (509)
|+... .+||++++++++ +++|++|+|++++|.+++. ..+|| +|++++|+|..|...++..|+++
T Consensus 47 yp~~~--~~Lr~~ia~~~~--------~~~I~it~Gs~~al~~~~~--~~~gd----~v~v~~P~y~~~~~~~~~~g~~~ 110 (330)
T PRK05664 47 LPETD--DGLEAAARAYYG--------APQLLPVAGSQAAIQALPR--LRAPG----RVGVLSPCYAEHAHAWRRAGHQV 110 (330)
T ss_pred CCCCh--HHHHHHHHHHhC--------CCCEEECcCHHHHHHHHHH--ccCCC----EEEEcCCChHHHHHHHHHcCCeE
Confidence 86543 889999999982 4799999999999998863 46787 99999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCC
Q psy13922 129 IGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEG 208 (509)
Q Consensus 129 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~ 208 (509)
+.++.+ .+++.+. +++++++++||||||.+++.+++++|+++|++++++||+||+|.++..
T Consensus 111 ~~v~~~----------~~~~~~~------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~--- 171 (330)
T PRK05664 111 RELDEA----------EVEAALD------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP--- 171 (330)
T ss_pred EEechh----------hHhhhhc------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC---
Confidence 998753 3444443 578899999999999999999999999999999999999999987642
Q ss_pred CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCC
Q psy13922 209 SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDD 288 (509)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 288 (509)
..++.++.. ..++|+++||||.| |+||+|+||++ +++++++.+.+.... +..+.+
T Consensus 172 --~~s~~~~~~-------~~~vi~~~SfSK~~-gl~GlRiG~~v---~~~~l~~~~~~~~~~-~~~~~~----------- 226 (330)
T PRK05664 172 --QHSLAACAH-------RPGLIVLRSFGKFF-GLAGARLGFVL---AEPALLRALAELLGP-WTVSGP----------- 226 (330)
T ss_pred --ccccccccc-------CCCEEEEeeccccc-cCCCcceEEEE---eCHHHHHHHHHhcCC-CCCCHH-----------
Confidence 123333321 23599999999999 79999999998 789999999876543 234555
Q ss_pred CCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCc
Q psy13922 289 PRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQG 368 (509)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 368 (509)
.|.++..+++. . .+.++.++.++++++.+.+.|++. ++. +.+
T Consensus 227 -----------------------~~~~~~~~L~~--------~---~~~~~~~~~~~~~r~~l~~~L~~~-~~~---~~~ 268 (330)
T PRK05664 227 -----------------------TRWLAQAALAD--------T---PWQRRQRERLLAASQRLAALLRRH-GLT---PAG 268 (330)
T ss_pred -----------------------HHHHHHHHHhC--------h---HHHHHHHHHHHHHHHHHHHHHHHC-CCc---ccC
Confidence 44444444431 1 224667889999999999999987 654 334
Q ss_pred e--eEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 369 A--MYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 369 g--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
+ +|+|+++. ++.. +.+.|.++||.+++
T Consensus 269 ~~~~f~~~~~~---------------~~~~-~~~~l~~~gi~v~~ 297 (330)
T PRK05664 269 GCALFQWVRTE---------------DAAA-LHEFLARRGILTRL 297 (330)
T ss_pred CcceEEEEecC---------------CHHH-HHHHHHHCCeEEEE
Confidence 4 77786543 2334 35667788999974
No 106
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=8.4e-34 Score=285.41 Aligned_cols=291 Identities=16% Similarity=0.238 Sum_probs=215.1
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCC
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDG 102 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~ 102 (509)
+|..|+.+.+++.+++.. .+.|+. ...+|++++++++ ++|++|+|+++++..++..+ .+||
T Consensus 18 np~~p~~~~~a~~~~~~~-----~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al~~~~~~~-~~gd- 78 (311)
T PRK08354 18 NPYPPEWLDEMFERAKEI-----SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEALYLIGILA-LRDR- 78 (311)
T ss_pred CCCCCHHHHHHHHHHHHH-----hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHHHHHHHhh-CCCC-
Confidence 334477888888777554 234864 3669999998873 47999999999999888554 4787
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
.|+++.|+|..|...++..|.+++.+ .+|++.+++.++ +++++++++||||||.+++.+++++
T Consensus 79 ---~vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~------~~~~vi~~~P~NPTG~~~~~~~l~~ 141 (311)
T PRK08354 79 ---KVIIPRHTYGEYERVARFFAARIIKG--------PNDPEKLEELVE------RNSVVFFCNPNNPDGKFYNFKELKP 141 (311)
T ss_pred ---eEEEeCCCcHHHHHHHHHcCCEEeec--------CCCHHHHHHhhc------CCCEEEEecCCCCCCCccCHHHHHH
Confidence 99999999999999999999999765 357888887765 3678889999999999999999999
Q ss_pred HHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHH
Q psy13922 183 IIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKA 262 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~ 262 (509)
|+++|+++|+++|+||+|.+|.+++. ..+ ..++++++||||.| |+||+|+||++ + +.+
T Consensus 142 l~~~a~~~~~~li~De~y~~f~~~~~--~~~-------------~~~vi~~~S~SK~~-~l~GlRiG~~v---~---~~~ 199 (311)
T PRK08354 142 LLDAVEDRNALLILDEAFIDFVKKPE--SPE-------------GENIIKLRTFTKSY-GLPGIRVGYVK---G---FEE 199 (311)
T ss_pred HHHHhhhcCcEEEEeCcchhcccccc--ccC-------------CCcEEEEeccHhhc-CCccceeeeee---e---hHH
Confidence 99999999999999999999987531 111 23599999999999 79999999997 4 556
Q ss_pred HHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHH
Q psy13922 263 MLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLD 342 (509)
Q Consensus 263 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (509)
.++.... .+..+.. +++++..++. + ..++++..++
T Consensus 200 ~l~~~~~-~~~~~~~----------------------------------~~~~~~~~~~---------~-~~~~~~~~~~ 234 (311)
T PRK08354 200 AFRSVRM-PWSIGST----------------------------------GYAFLEFLIE---------D-DFEHLRKTMP 234 (311)
T ss_pred HHHHcCC-CccCCHH----------------------------------HHHHHHHHHH---------h-HHHHHHHHHH
Confidence 6665443 2233334 3444444332 1 1122444445
Q ss_pred HHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCcc
Q psy13922 343 SLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTY 422 (509)
Q Consensus 343 ~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~ 422 (509)
.+++.++.+.+.+ ..+++++|+++ ++. ++.+++ +.+.++||.++||..|+. .+
T Consensus 235 ~~~~~~~~l~~~l-------~~~~~~~~~~~-~~~---------------~~~~~~-~~l~~~gv~v~~g~~f~~---~~ 287 (311)
T PRK08354 235 LIWREKERFEKAL-------YVKSDANFFIK-DVG---------------DAEKFV-EFLKRNGILVRDCTSFGL---PG 287 (311)
T ss_pred HHHHHHHHHHHhc-------CCCCCCcEEEE-ECC---------------CHHHHH-HHHHHCCeEEEecccCCC---CC
Confidence 5555555544433 23567777764 442 234444 455778999999999964 47
Q ss_pred ccccchhhhhhhHHHHHHHhh
Q psy13922 423 HFRQQVWWRHYTQRAIAKAKA 443 (509)
Q Consensus 423 ~~r~~~~~~~~~~~~~~~~~~ 443 (509)
+||+++..+.++++++++...
T Consensus 288 ~iRi~~~~~~~~~~l~~al~~ 308 (311)
T PRK08354 288 YIRFSVRDREENEKLIRALRE 308 (311)
T ss_pred eEEEEeCCHHHHHHHHHHHHH
Confidence 999999999999999998754
No 107
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.7e-33 Score=286.21 Aligned_cols=254 Identities=18% Similarity=0.256 Sum_probs=196.4
Q ss_pred ccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCC
Q psy13922 47 GSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNM 126 (509)
Q Consensus 47 ~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~ 126 (509)
.+|+... .+||+++++++ |+. ++++|++|+|++++|..+.. ++++| .|+++.|+|..|...++..|+
T Consensus 49 ~~Yp~~~--~~L~~~ia~~~----~~~-~~~~I~i~~Gs~e~i~~l~~-~~~~g-----~v~v~~P~y~~y~~~~~~~g~ 115 (339)
T PRK06959 49 RRLPEDD--DGLAACAARYY----GAP-DAAHVLPVAGSQAAIRALPA-LLPRG-----RVGIAPLAYSEYAPAFARHGH 115 (339)
T ss_pred HhCCCch--HHHHHHHHHHh----CCC-CcccEEECcCHHHHHHHHHH-hcCCC-----eEEEcCCCcHHHHHHHHHCCC
Confidence 3488654 88999999998 322 45899999999999997765 45554 588899999999999999999
Q ss_pred EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCccccc
Q psy13922 127 EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYA 206 (509)
Q Consensus 127 ~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~ 206 (509)
+++.++.++ + .+.. .+++++++|||||||.+++.+++++|++.|+++++++|+||+|.+|...
T Consensus 116 ~~~~v~~~~--------~----~~~~-----~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~ 178 (339)
T PRK06959 116 RVVPLDEAA--------D----TLPA-----ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA 178 (339)
T ss_pred EEEeecccc--------h----hccc-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc
Confidence 999987642 1 1222 4678999999999999999999999999999999999999999998642
Q ss_pred CCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhcccccc
Q psy13922 207 EGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLF 286 (509)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 286 (509)
.++..+. + ..++|+++||||.| |++|+|+||++ +++++++.+.+.... ++.+.+
T Consensus 179 -----~s~~~~~-~------~~~vi~l~SfSK~~-gl~GlRiGy~v---~~~~li~~l~~~~~~-~~vs~~--------- 232 (339)
T PRK06959 179 -----ASLAAHT-D------RPGLVVLRSVGKFF-GLAGVRAGFVL---AAPALLAALRDALGA-WTVSGP--------- 232 (339)
T ss_pred -----ccchhcc-C------CCCEEEEecChhhc-CCcchheEEEe---cCHHHHHHHHHhcCC-CCCcHH---------
Confidence 2333221 1 23489999999999 89999999998 899999999887653 345666
Q ss_pred CCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC
Q psy13922 287 DDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPV 366 (509)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 366 (509)
+|.++..+++. .. +.++.++.++++++.+.+.|+++ |+.+.
T Consensus 233 -------------------------~q~a~~~~L~~--------~~---~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-- 273 (339)
T PRK06959 233 -------------------------ARHAVRAAFAD--------AA---WQAAMRERLAADGARLAALLRAH-GFAVH-- 273 (339)
T ss_pred -------------------------HHHHHHHHhCc--------HH---HHHHHHHHHHHHHHHHHHHHHHC-CCCcc--
Confidence 56665555541 12 25677899999999999999998 77665
Q ss_pred CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 367 QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 367 ~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
.+++|+|+++. +... +...|.++||.++.
T Consensus 274 ~~~~f~~~~~~---------------~~~~-l~~~l~~~GI~vr~ 302 (339)
T PRK06959 274 ATPLFSWTDDP---------------RAAA-LHAALARRGIWTRY 302 (339)
T ss_pred CcceEEEEeCC---------------CHHH-HHHHHHhCCeEEEE
Confidence 35789997653 1233 35566678999984
No 108
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=4.8e-30 Score=261.16 Aligned_cols=320 Identities=24% Similarity=0.432 Sum_probs=249.1
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF 124 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~ 124 (509)
....|++..|..++++.+++++...++.....+++++++|+++++..++.++.++|+ +|+++.|+|.++...++..
T Consensus 28 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~----~vl~~~~~~~~~~~~~~~~ 103 (350)
T cd00609 28 GLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGD----EVLVPDPTYPGYEAAARLA 103 (350)
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCC----EEEEcCCCchhHHHHHHHC
Confidence 344488899999999999999998877656678999999999999999999998888 9999999999999999999
Q ss_pred CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCccc
Q psy13922 125 NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204 (509)
Q Consensus 125 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~ 204 (509)
|.+++.++.++.+.+..+.+.++..... ++++|++++|+||||..++.+++.+|+++|+++|+++|+|++|+.+.
T Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~ 178 (350)
T cd00609 104 GAEVVPVPLDEEGGFLLDLELLEAAKTP-----KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELV 178 (350)
T ss_pred CCEEEEEecccccCCccCHHHHHhhcCc-----cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhce
Confidence 9999999988665443333555554443 79999999999999999999999999999999999999999999988
Q ss_pred ccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH-HHHHHHHHhhh-cccCcchhhhhcc
Q psy13922 205 YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP-GVKAMLHKSIS-AMLCPTVLALVSL 282 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~-~~~~~l~~~~~-~~~~~~~~~~~~~ 282 (509)
+.+... .... .. .....+++++|+||.+ |.+|+|+|+++ .++ ++.+.+..... ....++..
T Consensus 179 ~~~~~~--~~~~-~~-----~~~~~~~~~~s~~K~~-~~~g~~~G~i~---~~~~~~~~~~~~~~~~~~~~~~~~----- 241 (350)
T cd00609 179 YDGEPP--PALA-LL-----DAYERVIVLRSFSKTF-GLPGLRIGYLI---APPEELLERLKKLLPYTTSGPSTL----- 241 (350)
T ss_pred eCCccc--cccc-Cc-----CccCcEEEEeeccccc-CCcccceEEEe---cCHHHHHHHHHHHHHhcccCCChH-----
Confidence 754211 1000 00 0123478889999999 68999999998 566 89998877655 23455555
Q ss_pred ccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy13922 283 PQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMS 362 (509)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 362 (509)
.+.++..++.. .. ++.+++++.+.++++.+.+.|++++...
T Consensus 242 -----------------------------~~~~~~~~l~~--------~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 282 (350)
T cd00609 242 -----------------------------SQAAAAAALDD--------GE--EHLEELRERYRRRRDALLEALKELGPLV 282 (350)
T ss_pred -----------------------------HHHHHHHHHhC--------cH--HHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 45555555441 11 4578889999999999999999985444
Q ss_pred eccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHh
Q psy13922 363 CNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAK 442 (509)
Q Consensus 363 ~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~ 442 (509)
+..+.+++++|+++.-+ .....+.++++++||.+.++..|..
T Consensus 283 ~~~~~~g~~~~~~~~~~-------------~~~~~~~~~l~~~gi~i~~~~~~~~------------------------- 324 (350)
T cd00609 283 VVKPSGGFFLWLDLPEG-------------DDEEFLERLLLEAGVVVRPGSAFGE------------------------- 324 (350)
T ss_pred ccCCCccEEEEEecCCC-------------ChHHHHHHHHHhCCEEEeccccccc-------------------------
Confidence 35677899999776521 1333467888899999999887763
Q ss_pred hcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 443 AEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
.+.. ++|++++...++|+.++++|+
T Consensus 325 -----------------------~~~~--------~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 325 -----------------------GGEG--------FVRLSFATPEEELEEALERLA 349 (350)
T ss_pred -----------------------CCCC--------eEEEEeeCCHHHHHHHHHHhh
Confidence 1222 899999966999999998875
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.98 E-value=1.1e-29 Score=266.76 Aligned_cols=351 Identities=16% Similarity=0.147 Sum_probs=242.8
Q ss_pred HHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEE
Q psy13922 29 DVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108 (509)
Q Consensus 29 ~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vl 108 (509)
.+.+++.+++.. +. .+|++..|.++||++++++++ .++|++|+|+++|+..++.+++++|| |+
T Consensus 58 a~~~a~~~a~~~---g~-~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~ggt~A~~~~~~all~pGD-----Vi 120 (460)
T PRK13238 58 AMSDRQWAAMMR---GD-EAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQGRAAEQILFPVLIKKGD-----VV 120 (460)
T ss_pred hhhHHHHHHHHh---CC-cccCCCCCHHHHHHHHHHHhC--------CCcEEECCCHHHHHHHHHHHhCCCCC-----EE
Confidence 477887777765 33 359999999999999999994 35799999999999999999998874 88
Q ss_pred EcCCCChhHHHHHHhcCCEEEEEecCCC------CCCC--CCHHHHHHHHHhhhccCCceEEEEeCCCCCCC-CCCCHHH
Q psy13922 109 IPIPQYPLYSASLAEFNMEQIGYYLDES------KQWG--LPISELERSITEARKHCNPRAIVIINPGNPTG-QVLTKEN 179 (509)
Q Consensus 109 v~~p~y~~~~~~~~~~g~~~~~v~~~~~------~~~~--~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG-~~~s~~~ 179 (509)
+++|.|..|...++.+|++++.+++++. ++|. +|++.|++.+++... .++++|++++|+|||| .+++.++
T Consensus 121 i~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~-~~tk~Ivl~~p~NptGG~v~s~~~ 199 (460)
T PRK13238 121 PSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA-ENVPFIVMTITNNSAGGQPVSMAN 199 (460)
T ss_pred ccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCC-CceeEEEEecCCCCCCCcCCCHHH
Confidence 9999999999999999999999998642 3454 999999999985211 2699999999999997 9999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCC--cccccC----CCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQ--DNVYAE----GSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
+++|.++|++||++||+|+++. ...+.. +....++.++...+.. ..+++++ |..|... .+. .|+++
T Consensus 200 l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s---~~D~~~~-Sg~K~g~--~~~-GG~i~- 271 (460)
T PRK13238 200 LRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFS---YADGLTM-SAKKDAM--VNI-GGLLC- 271 (460)
T ss_pred HHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcc---cCcEEEE-ecccCCC--Ccc-eeEEE-
Confidence 9999999999999999999663 232321 1234555554322211 1123333 4455431 221 35554
Q ss_pred ecCCHHHHHHHHHhhh------cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCC
Q psy13922 254 INLDPGVKAMLHKSIS------AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGE 327 (509)
Q Consensus 254 ~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 327 (509)
+.++++.+.++.... ++.+.+.. .|.|+...+..
T Consensus 272 -~~d~~l~~~~~~~~~~~~g~~t~~g~~~~----------------------------------~~~Ala~~l~e----- 311 (460)
T PRK13238 272 -FRDEDLFTECRTLCILYEGFPTYGGLAGR----------------------------------DMEALAVGLYE----- 311 (460)
T ss_pred -cChHHHHHHhhhcccccCCcccccCcHHH----------------------------------HHHHHHhhHHH-----
Confidence 244788888876531 11122222 24444433220
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCC-CCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 328 PSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMK-LPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
.. -+.......+++++|.+.|++. |+.+..|.||+|+++++. +..+ ....+. ++..++.+++++.|
T Consensus 312 -----~~--~~~~~~~~~~~~~~l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~----~~~~~~-~~~~~a~~L~~e~G 378 (460)
T PRK13238 312 -----GM--DEDYLAYRIGQVEYLGEGLEEA-GVPIQTPAGGHAVFVDAGKFLPH----IPAEQF-PAQALACELYLEAG 378 (460)
T ss_pred -----hh--ChHHHHHHHHHHHHHHHHHHHC-CCCeEccCCceEEEEEchhcCCC----CCCCCC-chHHHHHHHHHHcC
Confidence 00 0111222233578899999988 999999999999999885 1100 000111 35778999999999
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeec-
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILP- 485 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~- 485 (509)
|.+.|+..|..... +..+....+...++||++..
T Consensus 379 V~~~~~~~f~~~~~---------------------------------------------~~~~~~~~~~~~~~Rla~~rr 413 (460)
T PRK13238 379 IRGVEIGSLLLGRD---------------------------------------------PKTGEQLPAPAELLRLAIPRR 413 (460)
T ss_pred eeeecccceecccC---------------------------------------------CCCccccCCccceEEEecccc
Confidence 99999998876311 11111112223499999996
Q ss_pred --ChHHHHHHHHHHHHHHHH
Q psy13922 486 --QPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 486 --~~~~i~~~~~~l~~~~~~ 503 (509)
+.+.++.+.++|+++.++
T Consensus 414 ~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 414 VYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 999999999999998743
No 110
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=6.7e-29 Score=242.20 Aligned_cols=332 Identities=17% Similarity=0.216 Sum_probs=260.5
Q ss_pred HHHHHHHHhhcCCCCC-----------CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCC-
Q psy13922 6 SLSLQVLALVSLPQLF-----------DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQP- 73 (509)
Q Consensus 6 ~~~~~~~~~~~~~~~~-----------~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~- 73 (509)
-.+-+.++...+|..+ |.++.-+.|.++-+..+.. .....|-|..|.+++++++++++. |.+
T Consensus 14 lgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~---~~~k~Yl~i~G~~~f~~~~~~llF---G~d~ 87 (396)
T COG1448 14 LGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQ---EKTKNYLPIEGLPEFLEAVQKLLF---GADS 87 (396)
T ss_pred hHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcc---ccccccCCcCCcHHHHHHHHHHhc---CCCc
Confidence 3455566666677765 3444445677766666666 345559999999999999999995 433
Q ss_pred --CCCCcE--EEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 74 --ADWQDV--ILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 74 --~~~~~i--~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
+..++| +-|.|+|.|+......+..... +.+|++++|+|.++...++.+|.++..+|..+..+-.+|.+.+...
T Consensus 88 ~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~--~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~ 165 (396)
T COG1448 88 PALAEDRVATVQTLGGTGALRVAADFLARFFP--DATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLAD 165 (396)
T ss_pred HHHHhhhHhheecCCcchHHHHHHHHHHHhCC--CceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHH
Confidence 444444 5689999999999998866543 3379999999999999999999999999986655557999999999
Q ss_pred HHhhhccCCceEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCc
Q psy13922 150 ITEARKHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSM 228 (509)
Q Consensus 150 i~~~~~~~~~~~ivi~-~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (509)
+++.+ ...+|++. .+|||||..++.++|++|+++.++.+.+.+.|-+|.+|..+-++.-..+.-+... ..
T Consensus 166 L~~a~---~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~------~~ 236 (396)
T COG1448 166 LKTAP---EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEV------GP 236 (396)
T ss_pred HHhCC---CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHh------CC
Confidence 88752 34566674 6799999999999999999999999999999999999987644333344444333 22
Q ss_pred eeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH----H-hhhcccCcchhhhhccccccCCCCCchhHHHHHHHhh
Q psy13922 229 ELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH----K-SISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVL 303 (509)
Q Consensus 229 ~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (509)
.+++..|+||.| |+.|.|+|.+.+++.+.+..+++. . .++.+++|+..|..+++.+|+|+++
T Consensus 237 ~~lva~S~SKnf-gLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~L------------ 303 (396)
T COG1448 237 ELLVASSFSKNF-GLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPEL------------ 303 (396)
T ss_pred cEEEEehhhhhh-hhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHH------------
Confidence 388889999999 899999999998888887776553 2 2447889999988888887877664
Q ss_pred hcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C--CCeeccCCceeEEeecCCCCH
Q psy13922 304 DGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSI-E--GMSCNPVQGAMYAFPQMKLPA 380 (509)
Q Consensus 304 ~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~~g~~~~~~~~~~~ 380 (509)
...|..++..++.++.++|..+.+.|+.. + .+.++..+.|||.+..++
T Consensus 304 --------------------------ra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls--- 354 (396)
T COG1448 304 --------------------------RAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLS--- 354 (396)
T ss_pred --------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCCC---
Confidence 46788889999999999999999999983 2 478889999999984332
Q ss_pred HHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 381 KAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
.+.+.++.+++||+++
T Consensus 355 --------------~~QV~rLree~~IY~v 370 (396)
T COG1448 355 --------------PEQVDRLREEFGIYLV 370 (396)
T ss_pred --------------HHHHHHHHHhccEEEe
Confidence 2337899999999998
No 111
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.96 E-value=2.3e-26 Score=233.86 Aligned_cols=276 Identities=15% Similarity=0.168 Sum_probs=194.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
.|.++++..+++++ |+ |..++.+.+.+.+.+.+| ++++++++++|+++++..++.++.++|| .
T Consensus 35 ~~~~~~~~~~~~~~--------~~---g~~~~~~~Le~~lA~~~g--~~~e~ilv~~gg~~a~~~~~~al~~~gd----~ 97 (346)
T TIGR03576 35 GFKIDEEDLELLET--------YV---GPAIFEEKVQELGREHLG--GPEEKILVFNRTSSAILATILALEPPGR----K 97 (346)
T ss_pred ChhHHHHHHHHHHH--------hc---CCHHHHHHHHHHHHHHcC--CCcceEEEECCHHHHHHHHHHHhCCCCC----E
Confidence 46788888888888 32 333444444444444445 5678999999999999999999999998 9
Q ss_pred EEEc---CCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 107 VLIP---IPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 107 Vlv~---~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
|+++ .|+|..+...++..|++++.+ .|++.++. .+ ++++|+++ ++||+|.+++.+++++|
T Consensus 98 Vli~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~-----~~~lIiit-g~s~~G~v~~~~~L~~i 160 (346)
T TIGR03576 98 VVHYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--ID-----GTSLVVIT-GSTMDLKVVSEEDLKRV 160 (346)
T ss_pred EEECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--Cc-----CceEEEEE-CCCCCCcccCHHHHHHH
Confidence 9875 479999999999999986432 14454322 12 57887775 47999999999999999
Q ss_pred HHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHH
Q psy13922 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAM 263 (509)
Q Consensus 184 ~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~ 263 (509)
+++|+++|+++|+||+|..+..... ...+.... + .+ ++++||||. ++|+|+||++ +++++++.
T Consensus 161 ~~la~~~~~~livDEAy~~~~~~~~-~~~~~~~~----~-----~d-ivv~s~SKa---laG~r~G~v~---~~~~li~~ 223 (346)
T TIGR03576 161 IKQAKSKEAIVLVDDASGARVRRLY-GQPPALDL----G-----AD-LVVTSTDKL---MDGPRGGLLA---GRKELVDK 223 (346)
T ss_pred HHHHHHcCCEEEEECCccccccccC-CCCCHHHc----C-----Cc-EEEeccchh---ccccceEEEE---eCHHHHHH
Confidence 9999999999999999998754211 11122111 1 12 446699994 5899999998 89999999
Q ss_pred HHHhhhccc-CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHH
Q psy13922 264 LHKSISAML-CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLD 342 (509)
Q Consensus 264 l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (509)
+.+....+. +.+.+ .+++...+++ ... .+.+++
T Consensus 224 l~~~~~~~~~s~~~~----------------------------------~~~aa~~aL~----------~~~--~~~~~~ 257 (346)
T TIGR03576 224 IKSVGEQFGLEAQAP----------------------------------LLAAVVRALE----------EFE--LSRIRD 257 (346)
T ss_pred HHHhhcCcccCccHH----------------------------------HHHHHHHHHh----------hcc--HHHHHH
Confidence 988766332 24444 2333333322 010 345677
Q ss_pred HHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 343 SLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 343 ~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
.++++++.+.+.+++ +.+.++.++ |+|++++. .++.+++..+|+++||.++||..|.
T Consensus 258 ~l~~r~~~~~~~l~~---~~~~~~~~~-f~~~~~~~-------------~~~~~~~~~ll~~~gV~v~~~~~f~ 314 (346)
T TIGR03576 258 AFKRKEEVYLRLFDK---LNVERTPTG-FVIKGVEE-------------EKLIEIGLDLLRNYGIITITAVGMP 314 (346)
T ss_pred HHHHHHHHHHHHHHh---CCCCcCCCe-EEEEeCCC-------------CCHHHHHHHHHHhCCEEEeCCcccC
Confidence 888888888888774 445555556 68877651 1234568899999999999988774
No 112
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=2.3e-26 Score=239.67 Aligned_cols=373 Identities=14% Similarity=0.138 Sum_probs=242.2
Q ss_pred HHHHHHHHhhcC-CCCC---CCCCCCHHHHHHHHHHHhcccCCCc-ccCC----CCcchHHHHHHHHHHHhhhcCCCCCC
Q psy13922 6 SLSLQVLALVSL-PQLF---DDPRFPDDVKQRAQAVLDGCRGQSV-GSYT----DSPGIEIIRRHVAQYISRRDGQPADW 76 (509)
Q Consensus 6 ~~~~~~~~~~~~-~~~~---~~~~~p~~v~~a~~~~l~~~~~~~~-~~Y~----~~~g~~~lr~~va~~l~~~~g~~~~~ 76 (509)
..+|..+..... .-++ +....|..+++++.+.+........ ..+. ......++|+.+++++ |.. ++
T Consensus 7 ~~~r~~fp~l~~~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~-~~ 81 (401)
T PRK10874 7 AQFRAQFPALQDAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL----NAP-DA 81 (401)
T ss_pred HHHHHhCCCcCCceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc----CCC-CC
Confidence 456666664332 2234 3344678999999998876321111 0011 1223567888888887 321 67
Q ss_pred CcEEEeCCHHHHHHHHHHHhh----cCCCCCCCeEEEcCCCChh----HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLI----EDVDGKKPGVLIPIPQYPL----YSASLAEFNMEQIGYYLDESKQWGLPISELER 148 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~----~~gd~~~~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 148 (509)
++|++|+|++++++.+++++. ++|| +|+++.|.|.+ +...++..|++++.++.+. ++.+|++.+++
T Consensus 82 ~~i~~~~~~t~~i~~~~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~ 155 (401)
T PRK10874 82 KNIVWTRGTTESINLVAQSYARPRLQPGD----EIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPE 155 (401)
T ss_pred CEEEEECCHHHHHHHHHHHhhhccCCCcC----EEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHH
Confidence 899999999999999999984 5677 99999999865 4566678899999999865 35789999999
Q ss_pred HHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCc
Q psy13922 149 SITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSM 228 (509)
Q Consensus 149 ~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (509)
.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... ..+..+ + .
T Consensus 156 ~i~~-----~t~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~-----~~~~~~----~-----~ 213 (401)
T PRK10874 156 LITP-----RTRILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP-----ADVQAL----D-----I 213 (401)
T ss_pred hcCc-----CcEEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc-----CCchhc----C-----C
Confidence 9976 7999999999999999987 789999999999999999999653221 122111 1 1
Q ss_pred eeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccC
Q psy13922 229 ELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRG 308 (509)
Q Consensus 229 ~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (509)
.+++.|++|.+ |++| +|+++ .++++++.+............. -..+..+. .....++.|+.
T Consensus 214 -d~~~~s~~K~~-gp~G--~G~l~---~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----~~~~~~e~Gt~ 274 (401)
T PRK10874 214 -DFYAFSGHKLY-GPTG--IGVLY---GKSELLEAMSPWQGGGKMLTEV-------SFDGFTPQ-----SAPWRFEAGTP 274 (401)
T ss_pred -CEEEEeccccc-CCCc--cEEEE---EchHHHhcCCCeecCCcceEee-------ccCccCCC-----CChhhccCCCc
Confidence 24456899988 7777 48887 5788877664322100000000 00000000 00112233344
Q ss_pred cccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhh
Q psy13922 309 QSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKA 388 (509)
Q Consensus 309 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 388 (509)
+.....++..+++ +-.. ....+.+++.+++++++.+.|+++||+.+..+..+.++++.+.
T Consensus 275 ~~~~~~al~~al~--------~l~~-~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~----------- 334 (401)
T PRK10874 275 NVAGVIGLSAALE--------WLAD-IDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFA----------- 334 (401)
T ss_pred CHHHHHHHHHHHH--------HHHH-hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEEC-----------
Confidence 4334555554433 1111 1144567888888999999999988988775444445554453
Q ss_pred cCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCC
Q psy13922 389 EGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGA 468 (509)
Q Consensus 389 ~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (509)
++. .++ +...|.++||.+++|..|.. ++ ++.. ...
T Consensus 335 -~~~-~~~-~~~~L~~~gI~v~~g~~~~~-------------------------------~~------~~~~-----g~~ 369 (401)
T PRK10874 335 -GVH-HSD-LVTLLAEYGIALRAGQHCAQ-------------------------------PL------LAAL-----GVT 369 (401)
T ss_pred -CcC-HHH-HHHHHHHCCcEEeccccchH-------------------------------HH------HHHh-----CCC
Confidence 222 233 44667788999999886653 00 0110 011
Q ss_pred CCCCCCCceeEEEEee--cChHHHHHHHHHHHHHHHH
Q psy13922 469 GFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 469 ~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~ 503 (509)
+ ++|+|+. +++++++.+++.|+++++.
T Consensus 370 ~--------~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 370 G--------TLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred C--------EEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 2 8999999 8999999999999988764
No 113
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=2.7e-26 Score=238.92 Aligned_cols=372 Identities=14% Similarity=0.114 Sum_probs=241.5
Q ss_pred HHHHHHHhhcCC-CCCC---CCCCCHHHHHHHHHHHhcccCCCc-ccCC----CCcchHHHHHHHHHHHhhhcCCCCCCC
Q psy13922 7 LSLQVLALVSLP-QLFD---DPRFPDDVKQRAQAVLDGCRGQSV-GSYT----DSPGIEIIRRHVAQYISRRDGQPADWQ 77 (509)
Q Consensus 7 ~~~~~~~~~~~~-~~~~---~~~~p~~v~~a~~~~l~~~~~~~~-~~Y~----~~~g~~~lr~~va~~l~~~~g~~~~~~ 77 (509)
.+|..+.....+ -+++ ....|..+++++.+.+........ ..|. ....+.++|+.++++++ .. +++
T Consensus 5 ~~r~~fp~l~~~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g----~~-~~~ 79 (398)
T TIGR03392 5 QFRQQFPALQDGTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLN----AP-DAE 79 (398)
T ss_pred HHHHhCCccCCCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhC----CC-CCC
Confidence 456555543321 2343 334688999999888865321111 1111 11235678889998884 21 468
Q ss_pred cEEEeCCHHHHHHHHHHHhh----cCCCCCCCeEEEcCCCChh----HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 78 DVILSAGASDGIKSVLKLLI----EDVDGKKPGVLIPIPQYPL----YSASLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~----~~gd~~~~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
+|++|+|++++++.++.++. ++|| .|+++.|.|.+ +...++..|++++.++.+++ +.+|++.+++.
T Consensus 80 ~i~~t~g~t~~l~~~~~~~~~~~~~~gd----~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~ 153 (398)
T TIGR03392 80 NIVWTRGTTESINLVAQSYARPRLQPGD----EIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGAD--LLPDIRQLPEL 153 (398)
T ss_pred eEEEeCChHHHHHHHHHHhhhccCCCCC----EEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCC--CCcCHHHHHHH
Confidence 99999999999999999983 5677 99999999876 45566788999999998754 46899999999
Q ss_pred HHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCce
Q psy13922 150 ITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSME 229 (509)
Q Consensus 150 i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (509)
+.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+..... ..+... + .
T Consensus 154 i~~-----~t~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~-----~~~~~~----~-----~- 210 (398)
T TIGR03392 154 LTP-----RTRILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGP-----PDVQAL----D-----I- 210 (398)
T ss_pred hcc-----CceEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-----CChhhc----C-----C-
Confidence 977 7999999999999999988 788999999999999999999753321 122211 1 1
Q ss_pred eEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCc
Q psy13922 230 LASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQ 309 (509)
Q Consensus 230 vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (509)
.+++.|.+|.+ |++| +||++ .++++++.+..... ....... .-..+..+ +.....++.|+..
T Consensus 211 d~~~~s~~K~~-gp~G--~G~l~---~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~-----~~~~~~~e~GT~~ 272 (398)
T TIGR03392 211 DFYAFSGHKLY-GPTG--IGVLY---GKTELLEAMPPWQG-GGKMLSH------VSFDGFIP-----QAVPHRFEAGTPN 272 (398)
T ss_pred CEEEEeccccc-CCCc--eEEEE---EcHHHHhhCCCeec-CCceEee------cccccccc-----CCChhhccCCCCC
Confidence 23355888988 7666 79987 57887776643211 0000000 00000000 0011223444444
Q ss_pred ccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhc
Q psy13922 310 SVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAE 389 (509)
Q Consensus 310 ~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 389 (509)
..+..++..+++ +-.. ...+.+.++..++++++.+.|.++|++++..+..+.++++.++
T Consensus 273 ~~~~~a~~~al~--------~l~~-~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~------------ 331 (398)
T TIGR03392 273 IAGVIGLSAALE--------WLTD-IDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFA------------ 331 (398)
T ss_pred HHHHHHHHHHHH--------HHHH-hCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeC------------
Confidence 445555555443 1111 1145677888888999999999988888765444445554443
Q ss_pred CCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCC
Q psy13922 390 GKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAG 469 (509)
Q Consensus 390 g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (509)
++. .++ +...|.++||.+++|..|.. .++ +.. ...+
T Consensus 332 ~~~-~~~-l~~~L~~~gI~v~~g~~~~~-------------------------------~~~------~~~-----g~~~ 367 (398)
T TIGR03392 332 GVH-HSD-LAALLAESGIALRAGQHCAQ-------------------------------PLM------AAL-----GVSG 367 (398)
T ss_pred CcC-HHH-HHHHHHhCCEEEecCccchH-------------------------------HHH------HHh-----CCCC
Confidence 222 333 34556788999999886653 011 010 1112
Q ss_pred CCCCCCceeEEEEee--cChHHHHHHHHHHHHHHHH
Q psy13922 470 FGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 470 ~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~ 503 (509)
++|+|+. ++++|++..++.|++++++
T Consensus 368 --------~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 368 --------TLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred --------EEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 8999998 8999999999999998765
No 114
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.95 E-value=4.7e-26 Score=236.17 Aligned_cols=348 Identities=15% Similarity=0.208 Sum_probs=235.7
Q ss_pred HHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEE
Q psy13922 29 DVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108 (509)
Q Consensus 29 ~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vl 108 (509)
.+.++..+++.. +... |+++.|.++|+++++++++ .+++++|+|+++|+.+++.+++++|| .|
T Consensus 33 ams~~~~~a~~~---gd~~-Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~Gt~Al~la~~al~~pGD----~V- 95 (431)
T cd00617 33 AMSDYQWAAMML---GDEA-YAGSKSFYDLEDAVQDLFG--------FKHIIPTHQGRGAENILFSILLKPGR----TV- 95 (431)
T ss_pred HHHHHHHHHHHh---CCCc-cCCCCCHHHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHHhCCCCC----EE-
Confidence 455555555554 3334 9999999999999999994 35899999999999999999999998 77
Q ss_pred EcCCCChhHHHHHHhcCCEEEEEecCCCCC------C--CCCHHHHHHHHHhhhccCCceEEEEeCCCCCC-CCCCCHHH
Q psy13922 109 IPIPQYPLYSASLAEFNMEQIGYYLDESKQ------W--GLPISELERSITEARKHCNPRAIVIINPGNPT-GQVLTKEN 179 (509)
Q Consensus 109 v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~------~--~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt-G~~~s~~~ 179 (509)
+++|.|..+...+..+|++++.+++++..+ | .+|++.|++.+++... .++++|++++|+||+ |.+++.++
T Consensus 96 ~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~-~~~~~I~v~~p~N~~gG~~~s~~~ 174 (431)
T cd00617 96 PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA-ENIPYIVLTITNNTAGGQPVSMAN 174 (431)
T ss_pred ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccC-CCccEEEEECCcCCCCCccCCHHH
Confidence 689999999999999999999999975432 4 4999999999985210 148899999999998 99999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcc--cc----cCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe------
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDN--VY----AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR------ 247 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr------ 247 (509)
+++|.++|++||++||+|++.... .+ .++....++.++..+ ++|+||.++ ++|+|
T Consensus 175 l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e------------~~s~sd~~~-mS~~K~~~~~~ 241 (431)
T cd00617 175 LREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIARE------------MFSYADGCT-MSAKKDGLVNI 241 (431)
T ss_pred HHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHH------------hhccCCEEE-EEeecCCCCcc
Confidence 999999999999999999995321 11 122234556555333 345555553 55555
Q ss_pred eEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCC
Q psy13922 248 GGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGE 327 (509)
Q Consensus 248 ~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 327 (509)
+||++. .+++++++++.......+....+..+. . ...++...+.
T Consensus 242 GG~i~~--~d~~l~~~~~~~~~~~~~~~~~gG~~~-------------r---------------~~~A~A~gL~------ 285 (431)
T cd00617 242 GGFLAL--RDDELYEEARQRVVLYEGFVTYGGMAG-------------R---------------DMEALAQGLR------ 285 (431)
T ss_pred ceEEEe--CcHHHHHHHHHhccccCCccccccccH-------------H---------------HHHHHHHHHH------
Confidence 668862 456799888753321111111100000 0 1223332322
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCC--CCHHHHHHHhhcCCCCcHHHHHHHHhhc
Q psy13922 328 PSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMK--LPAKAIAKAKAEGKCPSVLYAFELLERT 405 (509)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~ll~~~ 405 (509)
+..+ .+.+.+. .++++++.+.|++. |+.+..|.|++++|++++ +|. ....+ .++..++.+++++.
T Consensus 286 ----e~~~-~~~l~~~-~~~r~~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~~~-----~~~~~-~~~~~la~~L~~e~ 352 (431)
T cd00617 286 ----EAVE-EDYLRHR-VEQVRYLGDRLDEA-GVPIVEPAGGHAVFIDAREFLPH-----IPQEQ-FPAQALAAELYLEA 352 (431)
T ss_pred ----hccc-HHHHHHH-HHHHHHHHHHHHHC-CCCccCCCcceEEEEEhHHhcCC-----CCccc-CcHHHHHHHHHHHc
Confidence 0000 1222223 33568999999998 999999999999998875 110 00001 25777788999999
Q ss_pred CeEEec-CCCC-CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe
Q psy13922 406 GICIVP-GAGF-GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI 483 (509)
Q Consensus 406 gI~v~p-g~~f-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~ 483 (509)
||.+.- |... +.+ +..+....+.--.+||.+
T Consensus 353 gV~~~~~g~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~rl~~ 385 (431)
T cd00617 353 GVRAVELGIFSAGRD-----------------------------------------------PNTGENKYPELELVRLAI 385 (431)
T ss_pred CeeEEeecceecccC-----------------------------------------------CCCCcccCCccceeEEec
Confidence 999764 4421 221 111111111122799998
Q ss_pred e---cChHHHHHHHHHHHHHHHH
Q psy13922 484 L---PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 484 ~---~~~~~i~~~~~~l~~~~~~ 503 (509)
- .+.+.++...+.|.++.++
T Consensus 386 prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 386 PRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cccccCHHHHHHHHHHHHHHHhh
Confidence 7 5889999999999998875
No 115
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.95 E-value=9.7e-26 Score=234.38 Aligned_cols=335 Identities=16% Similarity=0.182 Sum_probs=228.3
Q ss_pred CCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 24 PRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 24 ~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
|.+ |+.+.+++.+++.+.. .....|....|..++++++++++.+.+|. +++|++|+| ++++..++.+++++||
T Consensus 53 ~~~~~~~~i~~a~~~~~~~~~-~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~~a~~~~~~~l~~~gd 127 (397)
T PRK06939 53 LGLANHPELIAAAKAALDSHG-FGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-FDANGGLFETLLGKED 127 (397)
T ss_pred cccCCCHHHHHHHHHHHHHcC-CCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-HHHHHHHHHHhCCCCC
Confidence 566 6789999999887622 11222444578889999999999888773 367888888 6788899999999998
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc-cCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK-HCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~-~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
.|+++.|+|..+...++.+|.+++.++. .|++.+++.+++... ..++++|++.+.+||+|... ++
T Consensus 128 ----~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~---~~ 193 (397)
T PRK06939 128 ----AIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA---PL 193 (397)
T ss_pred ----EEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC---CH
Confidence 9999999999999999999999887753 378899888865321 12577777778899999864 48
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGV 260 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~ 260 (509)
++|.++|+++|++||+||+|....+... ..+.... .++. ...+++++|+||.+ + |.|+||++ +++++
T Consensus 194 ~~l~~la~~~~~~li~De~~~~g~~~~~--~~~~~~~-~~~~----~~~~i~~~S~sK~~-~--g~r~G~v~---~~~~~ 260 (397)
T PRK06939 194 PEICDLADKYDALVMVDDSHAVGFVGEN--GRGTVEH-FGVM----DRVDIITGTLGKAL-G--GASGGYTA---GRKEV 260 (397)
T ss_pred HHHHHHHHHhCCEEEEECcccccCcCCC--CCCHHHH-cCCC----CCCcEEEEECHHHh-C--ccCceEEE---eCHHH
Confidence 9999999999999999999964222211 1111111 1111 11257888999998 3 45999998 78899
Q ss_pred HHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 261 KAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 261 ~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
++.+......+ .+..... .+.++..+++ +..+.+
T Consensus 261 ~~~l~~~~~~~~~~~~~~~~---------------------------------~~~a~~~al~-----------~~~~~~ 296 (397)
T PRK06939 261 IDWLRQRSRPYLFSNSLAPA---------------------------------IVAASIKVLE-----------LLEESD 296 (397)
T ss_pred HHHHHHhCccccccCCCCHH---------------------------------HHHHHHHHHH-----------HHhcCH
Confidence 99887643211 1111110 1111111111 111135
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
++++.++++++.+.+.|+++ ++.+.++.++++.+. +. .. .++.+++..++++ ||.+.++. |...
T Consensus 297 ~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~-~~--~~----------~~~~~~~~~L~~~-gI~v~~~~-~~~~ 360 (397)
T PRK06939 297 ELRDRLWENARYFREGMTAA-GFTLGPGEHPIIPVM-LG--DA----------KLAQEFADRLLEE-GVYVIGFS-FPVV 360 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEEE-EC--CH----------HHHHHHHHHHHHC-CceEeeeC-CCCC
Confidence 67788999999999999887 777666666665442 22 10 0234555566555 99998644 3220
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEK 496 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~ 496 (509)
. .+.. ++|++++ +++++|++++++
T Consensus 361 ~----------------------------------------------~~~~--------~iRi~~~~~~~~~~i~~~l~~ 386 (397)
T PRK06939 361 P----------------------------------------------KGQA--------RIRTQMSAAHTKEQLDRAIDA 386 (397)
T ss_pred C----------------------------------------------CCCc--------eEEEEECCCCCHHHHHHHHHH
Confidence 0 1212 8998885 899999999999
Q ss_pred HHHHHHHH
Q psy13922 497 FREFHEEF 504 (509)
Q Consensus 497 l~~~~~~~ 504 (509)
|++++++.
T Consensus 387 L~~~~~~~ 394 (397)
T PRK06939 387 FEKVGKEL 394 (397)
T ss_pred HHHHHHHh
Confidence 99998754
No 116
>KOG0633|consensus
Probab=99.95 E-value=1.7e-27 Score=219.48 Aligned_cols=319 Identities=15% Similarity=0.219 Sum_probs=235.0
Q ss_pred cCCCcccCCCCcchHHHHHHHHHHHhhhcC------CCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCh
Q psy13922 42 RGQSVGSYTDSPGIEIIRRHVAQYISRRDG------QPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYP 115 (509)
Q Consensus 42 ~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g------~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~ 115 (509)
.....++|+++.- -++...+.++=+++.. .++++++|.++-|+-|.|..++++.+.||. ++|+...|+|.
T Consensus 47 d~~e~~ryPdP~q-~efk~~~~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGk---eKIl~cPPtys 122 (375)
T KOG0633|consen 47 DANENPRYPDPEQ-MEFKYVYPDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGK---EKILDCPPTYS 122 (375)
T ss_pred ccccCCCCcCHHH-cccccccCCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCc---cceeecCCcce
Confidence 3345565666543 4455555444433331 357889999999999999999999999982 38999999999
Q ss_pred hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEE
Q psy13922 116 LYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195 (509)
Q Consensus 116 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI 195 (509)
.|.-.+.-++++++.+|++++ |.++.+.+.+.++... .+|++++++|+||||..+..+++.+|.+.-. |.++|
T Consensus 123 MY~v~A~iNd~eVvkvpl~pd--F~lnvdai~evl~~ds---~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVV 195 (375)
T KOG0633|consen 123 MYVVDAAINDAEVVKVPLNPD--FSLNVDAIAEVLELDS---KIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVV 195 (375)
T ss_pred eEEEEeecCCceEEEecCCCC--ccccHHHHHHHHhccc---cceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEE
Confidence 999889999999999999875 7999999999887632 5899999999999999999999888887443 89999
Q ss_pred EcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcc
Q psy13922 196 ADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPT 275 (509)
Q Consensus 196 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~ 275 (509)
+||+|.+|.-.+ |-..++.. +.|.+++.++||.| |++|+|+||.. .+..+++.+.+....+ +.+
T Consensus 196 vDEAYidFsg~~-----S~~~lV~k------YpNLivlqTlSKsf-GLAGiRvG~~~---~~~~ia~iln~~KaPY-NiS 259 (375)
T KOG0633|consen 196 VDEAYIDFSGVE-----SRMKLVKK------YPNLIVLQTLSKSF-GLAGIRVGYGA---FPLSIAEILNRAKAPY-NIS 259 (375)
T ss_pred EeeeeEeecccc-----ccchHhHh------CCceeehhhhhhhc-CcceeEeeccc---ccHHHHHHHHhccCCc-ccc
Confidence 999999986321 22223332 45699999999999 99999999998 6888888887766644 444
Q ss_pred hhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13922 276 VLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTF 355 (509)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 355 (509)
.++ ..+|++++- +...+.++..++.+.+.+..+.+.|
T Consensus 260 ~~~---------------------------------s~~AL~Als----------~~n~kkme~~rdaiv~er~RL~keL 296 (375)
T KOG0633|consen 260 VAG---------------------------------SVAALAALS----------DSNGKKMEDVRDAIVRERERLFKEL 296 (375)
T ss_pred chh---------------------------------HHHHHHhcC----------cccchHHHHHHHHHHHHHHHHHHHh
Confidence 441 233333332 1222338899999999999999999
Q ss_pred hcCCCCee-ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC-Cccccccchhhhhh
Q psy13922 356 NSIEGMSC-NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP-GTYHFRQQVWWRHY 433 (509)
Q Consensus 356 ~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~-~~~~~r~~~~~~~~ 433 (509)
..+|++.- ..+....|+.+++.-.... -+..+..+.+.+.|+.|+- .+..+ ..+++|++|+++++
T Consensus 297 t~v~~~~~~~gg~daNFiLi~v~~~~n~----------~akkly~q~at~~gVvVRf---rgse~~c~G~lRitvGt~Ee 363 (375)
T KOG0633|consen 297 TEVPFLNDYPGGSDANFILIEVTGGDNG----------MAKKLYKQDATKMGVVVRF---RGSEEGCKGYLRITVGTPEE 363 (375)
T ss_pred hcCccccCCCCcccccEEEEEEcCCCcH----------HHHHHHHHHHHhcceEEEE---cCCccccceeEEEEcCCccc
Confidence 99987763 3344444555566411100 0223345667789999983 33333 68999999999999
Q ss_pred hHHHHHHHhh
Q psy13922 434 TQRAIAKAKA 443 (509)
Q Consensus 434 ~~~~~~~~~~ 443 (509)
|.-|+...++
T Consensus 364 ntvL~k~~K~ 373 (375)
T KOG0633|consen 364 NTVLMKCLKQ 373 (375)
T ss_pred chHHHHHHHh
Confidence 9999886654
No 117
>PLN02822 serine palmitoyltransferase
Probab=99.95 E-value=2.8e-25 Score=235.24 Aligned_cols=338 Identities=14% Similarity=0.129 Sum_probs=237.3
Q ss_pred CHHHHHHHHHHHhcccCCCc---ccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSV---GSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~---~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
|+.+++++.+++++...+.. +.|++..+..+|++++++++. .++.|++++|.+ ++..++.++++++|
T Consensus 125 ~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s~G~~-a~~sai~a~~~~gd-- 194 (481)
T PLN02822 125 NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYSYGLS-TIFSVIPAFCKKGD-- 194 (481)
T ss_pred CHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEECCHHH-HHHHHHHHhCCCCC--
Confidence 78999999999998543222 247888889999999999994 457899998887 67889999999988
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc----CCc-eEEEEeCCCCCCCCCCCHH
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH----CNP-RAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~----~~~-~~ivi~~p~NPtG~~~s~~ 178 (509)
.|++....|..+...+...|.+++.++.+ |.+.++..+++..+. +++ ++|+++.++|++|.+++
T Consensus 195 --~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~-- 263 (481)
T PLN02822 195 --IIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP-- 263 (481)
T ss_pred --EEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC--
Confidence 88888888788878888889999988755 455566655532211 234 68888899999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
+++|+++|++||+++|+||+|+...++.. .....+. .++.. ....|++.||||.+ |++| ||++ +++
T Consensus 264 -L~~i~~l~~k~~~~LIvDEa~s~gvlG~~--G~G~~e~-~~v~~---~~~dii~~s~sKal-g~~G---G~i~---g~~ 329 (481)
T PLN02822 264 -LDEIVRLKEKYRFRVLLDESNSFGVLGKS--GRGLSEH-FGVPI---EKIDIITAAMGHAL-ATEG---GFCT---GSA 329 (481)
T ss_pred -HHHHHHHHHHcCCEEEEECCccccccCCC--CCChHHH-cCCCC---CCCeEEEecchhhh-hhCC---eEEE---cCH
Confidence 89999999999999999999997766421 1122221 11110 01146678999999 7888 9998 899
Q ss_pred HHHHHHHHhhhc-ccCc--chhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 259 GVKAMLHKSISA-MLCP--TVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 259 ~~~~~l~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
++++.++..... ..+. +... +.| +.+++.. .+
T Consensus 330 ~ii~~~~~~~~~~~fsa~lPp~~------------------~~A------------a~~aL~~---------------l~ 364 (481)
T PLN02822 330 RVVDHQRLSSSGYVFSASLPPYL------------------ASA------------AITAIDV---------------LE 364 (481)
T ss_pred HHHHHHHhcCCceeeccccCHHH------------------HHH------------HHHHHHH---------------HH
Confidence 999988754432 2222 2220 000 1222221 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCC---cHHHHHHHHhhcCeEEecC
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCP---SVLYAFELLERTGICIVPG 412 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~ll~~~gI~v~pg 412 (509)
...++++.++++.+++.+.|++++|+.+..+.+++++++.++-+... ...+ ...++.++++++||.+.|+
T Consensus 365 ~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~-------~~~~~~~~~~~~~~Ll~e~GV~v~~~ 437 (481)
T PLN02822 365 DNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGS-------AKEDLSLLEHIADRMLKEDSVLVVVS 437 (481)
T ss_pred hCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCccc-------ccchHHHHHHHHHHHHhcCCEEEEee
Confidence 12567789999999999999998788887777888888777521000 0001 2456777887899999987
Q ss_pred CC--CCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChH
Q psy13922 413 AG--FGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPE 488 (509)
Q Consensus 413 ~~--f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~ 488 (509)
.. |.. + ++..++|++++ .+++
T Consensus 438 ~~~~~~~-------------------------------------------------~------~~~~~lRi~is~~~t~e 462 (481)
T PLN02822 438 KRSTLDK-------------------------------------------------C------RLPVGIRLFVSAGHTES 462 (481)
T ss_pred CCCCcCC-------------------------------------------------C------CCCCcEEEEECCCCCHH
Confidence 43 221 0 11117998866 8999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy13922 489 KLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 489 ~i~~~~~~l~~~~~~~~~ 506 (509)
+|++++++|++++.+...
T Consensus 463 dI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 463 DILKASESLKRVAASVLK 480 (481)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999987653
No 118
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.95 E-value=1.9e-25 Score=228.84 Aligned_cols=321 Identities=16% Similarity=0.133 Sum_probs=217.4
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCC----CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYT----DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~----~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
.|+.+++++.++++...... ..|. ......++++++++++ + .++.|++++|+.+.+ .++..++++||
T Consensus 31 ~~~~v~~a~~~~~~~~~~~~-~~~~~~~g~~~~~~~l~~~la~~~----~---~~~~i~~~~G~~~~~-~~l~~~~~~gd 101 (360)
T TIGR00858 31 SHPEVIQAAQQGAEQYGAGS-TASRLVSGNSPLHEELEEELAEWK----G---TEAALLFSSGYLANV-GVISALVGKGD 101 (360)
T ss_pred CCHHHHHHHHHHHHhcCCCC-CCcCcccCCcHHHHHHHHHHHHHh----C---CCCEEEECchHHHHH-HHHHHhCCCCC
Confidence 35889999999987633211 1122 2233456777777776 3 356788888865544 57788888888
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.|+++.|+|..+...++..|.+++.++ .+|++.|++.++.... .++++|++.+++||||...+ ++
T Consensus 102 ----~v~~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~~~~~~~-~~~~~v~~~~~~~~~G~~~~---~~ 166 (360)
T TIGR00858 102 ----LILSDALNHASLIDGCRLSGARVRRYR-------HNDVEHLERLLEKNRG-ERRKLIVTDGVFSMDGDIAP---LP 166 (360)
T ss_pred ----EEEEEccccHHHHHHHHhcCCceEEec-------CCCHHHHHHHHHHccc-CCCeEEEEeCCccCCCCCcC---HH
Confidence 999999999999999999999988776 2488999998875210 14678888899999998876 88
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|.++|+++|++||+||+|..+.++.. ..+..... .+. ++.++|+++|+||.+ |++| ||++ ++++++
T Consensus 167 ~i~~l~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~---~~~~~i~i~s~sK~~-~~~g---G~~~---~~~~~~ 233 (360)
T TIGR00858 167 QLVALAERYGAWLMVDDAHGTGVLGED--GRGTLEHF-GLK---PEPVDIQVGTLSKAL-GSYG---AYVA---GSQALI 233 (360)
T ss_pred HHHHHHHHcCcEEEEECcccccCcCCC--CCchHHhc-CCC---ccCCcEEEEechhhh-hccC---cEEE---cCHHHH
Confidence 999999999999999999987655421 12222211 111 123488899999999 6655 8987 788998
Q ss_pred HHHHHhhhcc--c-CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 262 AMLHKSISAM--L-CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 262 ~~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+.+......+ . ..+.. .+.++..+++ +..+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~al~-----------~~~~~~ 268 (360)
T TIGR00858 234 DYLINRARTLIFSTALPPA----------------------------------VAAAALAALE-----------LIQEEP 268 (360)
T ss_pred HHHHHhCccceecCCCCHH----------------------------------HHHHHHHHHH-----------HHhhCH
Confidence 8886543221 1 12222 2222222211 111234
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
.+++.++++++++.+.|+++ ++++.++ ++.++|+.+.... ++.++ .+.|.++||.+.++..+...
T Consensus 269 ~~~~~~~~~~~~l~~~L~~~-~~~~~~~-~~~~~~~~~~~~~------------~~~~~-~~~l~~~gI~v~~~~~~~~~ 333 (360)
T TIGR00858 269 WRREKLLALIARLRAGLEAL-GFTLMPS-CTPIVPVIIGDNA------------SALAL-AEELQQQGIFVGAIRPPTVP 333 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCccCCC-CCCEEEEEeCCHH------------HHHHH-HHHHHHCCeeEeeeCCCCCC
Confidence 66789999999999999987 6776654 4556776554111 23344 45556779999987655431
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEK 496 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~ 496 (509)
.+.. ++|+++. ++++++++++++
T Consensus 334 -----------------------------------------------~~~~--------~iRis~~~~~~~~~i~~~l~~ 358 (360)
T TIGR00858 334 -----------------------------------------------AGTS--------RLRLTLSAAHTPGDIDRLAEA 358 (360)
T ss_pred -----------------------------------------------CCCc--------eEEEEEcCCCCHHHHHHHHHh
Confidence 1222 8999998 699999999987
Q ss_pred HH
Q psy13922 497 FR 498 (509)
Q Consensus 497 l~ 498 (509)
|+
T Consensus 359 l~ 360 (360)
T TIGR00858 359 LK 360 (360)
T ss_pred hC
Confidence 73
No 119
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.95 E-value=6.9e-25 Score=227.89 Aligned_cols=324 Identities=17% Similarity=0.210 Sum_probs=220.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCc---ch----HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSP---GI----EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~---g~----~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
++.+++++.+++.+.. . .|+++. |. .++++++|++++ .+++++++|+++|+..++.+++++
T Consensus 54 ~~~v~~~~~~~~~~~~---~-~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii~~~~~~a~~~~~~~l~~~ 121 (393)
T TIGR01822 54 HPDLIQAAKDALDEHG---F-GMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTILYASCFDANGGLFETLLGA 121 (393)
T ss_pred CHHHHHHHHHHHHHhC---C-CCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEEECchHHHHHHHHHHhCCC
Confidence 6789999999888721 2 254444 65 778888888883 256788889999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
|| .|+++.|.|..+...++..+.+.+.++ .+|++.|++.+++.... .++++|++++++||||.+.+
T Consensus 122 gd----~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~-- 188 (393)
T TIGR01822 122 ED----AIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP-- 188 (393)
T ss_pred CC----EEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC--
Confidence 98 999999999999988888887775543 46899999999863221 26788888899999999977
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
+++|+++|++||+++|+||+|.....+. ...+..... ++. ....+++.|+||.+ +|+|+||++ +++
T Consensus 189 -l~~i~~la~~~~~~li~De~~~~g~~~~--~~~~~~~~~-~~~----~~~di~~~s~sK~l---~g~r~G~~~---~~~ 254 (393)
T TIGR01822 189 -LDEICDLADKYDALVMVDECHATGFLGP--TGRGSHELC-GVM----GRVDIITGTLGKAL---GGASGGFTT---ARK 254 (393)
T ss_pred -HHHHHHHHHHcCCEEEEECCccccCcCC--CCCchHHhc-CCC----CCCeEEEEEChHHh---hCCCcEEEE---eCH
Confidence 8999999999999999999996433221 111222211 111 11247778999987 367999997 789
Q ss_pred HHHHHHHHhhhcc--cCc-chhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 259 GVKAMLHKSISAM--LCP-TVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 259 ~~~~~l~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
++++.+......+ .+. +.. .+.++..+++ ..+
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~----------------------------------~~~a~~~al~-----------~~~ 289 (393)
T TIGR01822 255 EVVELLRQRSRPYLFSNSLPPA----------------------------------VVGASIKVLE-----------MLE 289 (393)
T ss_pred HHHHHHHHhCccceecCCCCHH----------------------------------HHHHHHHHHH-----------HHh
Confidence 9999887643211 111 111 1111111111 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
+.+++++.++++++++.+.|++. |+.+.++.+.++.+ .+. .. .....+...++ ++||.+. +..|
T Consensus 290 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~i-~~~--~~----------~~~~~l~~~L~-~~gI~v~-~~~~ 353 (393)
T TIGR01822 290 ASNELRDRLWANTRYFRERMEAA-GFDIKPADHPIIPV-MLY--DA----------VLAQRFARRLL-EEGIYVT-GFFY 353 (393)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEE-EeC--CH----------HHHHHHHHHHH-HCCeeEe-eeCC
Confidence 24567888999999999999887 77766555554332 222 10 01344445555 5599987 5444
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAM 493 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~ 493 (509)
...+ .+ ..++|++++ +++++|+++
T Consensus 354 ~~~~----------------------------------------------~~--------~~~iRis~~~~~t~edi~~~ 379 (393)
T TIGR01822 354 PVVP----------------------------------------------KG--------QARIRVQISAAHTEEQLDRA 379 (393)
T ss_pred CCCC----------------------------------------------CC--------CceEEEEECCCCCHHHHHHH
Confidence 3200 12 127898876 789999999
Q ss_pred HHHHHHHHHHH
Q psy13922 494 LEKFREFHEEF 504 (509)
Q Consensus 494 ~~~l~~~~~~~ 504 (509)
+++|+++.+++
T Consensus 380 ~~~l~~~~~~~ 390 (393)
T TIGR01822 380 VEAFTRIGREL 390 (393)
T ss_pred HHHHHHHHHHh
Confidence 99999987654
No 120
>PRK10534 L-threonine aldolase; Provisional
Probab=99.95 E-value=1.3e-25 Score=228.09 Aligned_cols=289 Identities=14% Similarity=0.113 Sum_probs=190.0
Q ss_pred CCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
|..||.+++++.+.... ...|+|..+..+|+++++++++ .+.+++++|+++++..++.+++.+||
T Consensus 10 ~~p~~~~~~a~~~~~~~-----~~~Y~~~~~~~~L~~~la~~~g--------~~~~~v~~~g~~a~~~~l~~~~~~gd-- 74 (333)
T PRK10534 10 TRPSRAMLEAMMAAPVG-----DDVYGDDPTVNALQDYAAELSG--------KEAALFLPTGTQANLVALLSHCERGE-- 74 (333)
T ss_pred CCCCHHHHHHHHhccCC-----CcccCCCHHHHHHHHHHHHHhC--------CCeEEEeCchHHHHHHHHHHhcCCCC--
Confidence 33567888888664433 3458777788999999999983 24456888888888888888888888
Q ss_pred CCeEEEcCCCChh-HHHH-HHhcC-CEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHH
Q psy13922 104 KPGVLIPIPQYPL-YSAS-LAEFN-MEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 104 ~~~Vlv~~p~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
.|+++.|+|.. |... ....+ .+++.++.++ +|.+|+++|++++.+...+ .++++|+++||+ +|.+++.++
T Consensus 75 --~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~ 148 (333)
T PRK10534 75 --EYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREY 148 (333)
T ss_pred --eeEEechhhhhHhcCCchHHhcCceEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHH
Confidence 99998888753 3211 23333 6778777653 4789999999988641100 147899999766 499999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeE-EEeeecCCH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGG-YSEVINLDP 258 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G-~v~~~~~~~ 258 (509)
+++|+++|++++++||+||+|....... ...+...+.. ..+.++ .||||.| |++ +| |++ +++
T Consensus 149 l~~i~~~~~~~~~~lvvDEA~~~~~~~~--~~~~~~~~~~-------~~~~~~-~s~SK~~-~~~---~G~~~~---~~~ 211 (333)
T PRK10534 149 LKQAWEFTRERNLALHVDGARIFNAVVA--YGCELKEITQ-------YCDSFT-ICLSKGL-GTP---VGSLLV---GNR 211 (333)
T ss_pred HHHHHHHHHHcCCeEEeeHHHHHHHHHH--cCCCHHHHHh-------cCCEEE-EEeEcCC-CCc---ccceEE---cCH
Confidence 9999999999999999999987322110 0112222211 111333 3899998 553 67 565 899
Q ss_pred HHHHHHHHhhhcccC-cchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSISAMLC-PTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+.+....+.. .+..+ . .+++....++ . .
T Consensus 212 ~~i~~~~~~~~~~~~~~~~~~----------------~----------------~~a~~~~~l~----------~----~ 245 (333)
T PRK10534 212 DYIKRARRWRKMTGGGMRQAG----------------I----------------LAAAGLYALK----------H----N 245 (333)
T ss_pred HHHHHHHHHHHHhCCchhhHH----------------H----------------HHHHHHHHHH----------h----h
Confidence 999999877653221 11110 0 1222111111 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPG 412 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg 412 (509)
.+.++...++++++.+.|+++ |+.+.+|+ +.|+|++++. .+... +.++|.++||.++||
T Consensus 246 ~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~-~nfv~~~~~~-------------~~~~~-~~~~l~~~gi~v~~~ 304 (333)
T PRK10534 246 VARLQEDHDNAAWLAEQLREA-GADVMRQD-TNMLFVRVGE-------------EQAAA-LGEYMRERNVLINAS 304 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCccCCCC-ceEEEEECCc-------------hhHHH-HHHHHHHcCeeecCC
Confidence 122233445678999999998 88888775 6677876641 01233 467888899999875
No 121
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=5.5e-25 Score=226.69 Aligned_cols=179 Identities=12% Similarity=0.097 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCC
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDE 135 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 135 (509)
..+++.+|+++ | .+.+++++|+++++..++.++.++|| .|+++.+.|.+....++..|++++.++.+.
T Consensus 54 ~~~~e~lA~~~----g----~~~~~i~~g~~~a~~~~~~~l~~~gd----~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~ 121 (370)
T TIGR02539 54 HDFLEDLAEFL----G----MDEARVTHGAREGKFAVMHALCKEGD----WVVLDGLAHYTSYVAAERAGLNVKEVPHTG 121 (370)
T ss_pred HHHHHHHHHHh----C----CCceEEECChHHHHHHHHHHhhCCCC----EEEECCcccHHHHHHHHHcCCEEEEEecCC
Confidence 56777788877 3 24677899999999999999998888 999998887776678888999999999876
Q ss_pred CCCCCCCHHHHHHHHHhhhcc--CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcccc
Q psy13922 136 SKQWGLPISELERSITEARKH--CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYS 213 (509)
Q Consensus 136 ~~~~~~d~~~L~~~i~~~~~~--~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~ 213 (509)
+.+|.+|++.|++.+++..+. .++++|++++|+||+|...+ +++|+++|+++|+++|+|++|...... .+
T Consensus 122 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~-----~~ 193 (370)
T TIGR02539 122 HPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP-----VS 193 (370)
T ss_pred cccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC-----CC
Confidence 556889999999998752111 25789999999999999877 888888999999999999999874321 12
Q ss_pred HHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 214 FKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 214 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.... +. .++++|+||.+ | +|.|+||++ .++++++.+.+...
T Consensus 194 ~~~~---------~~-di~v~s~sK~~-~-~~g~~G~l~---~~~~~i~~l~~~~~ 234 (370)
T TIGR02539 194 AKEI---------GA-DFIVGSGHKSM-A-ASGPCGVLG---MSEEWEDIVLRKSR 234 (370)
T ss_pred HHHc---------CC-CEEEeeCcccc-c-CCCCEEEEE---ECHHHHhhhccccc
Confidence 2111 12 24468999999 6 577899998 78999998876553
No 122
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.94 E-value=7.7e-25 Score=226.85 Aligned_cols=331 Identities=15% Similarity=0.209 Sum_probs=227.5
Q ss_pred CCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 24 PRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 24 ~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
+.+ ++.+++++.+++.+.. ...+.|....|..++++++++++.+.+|. ++.+++|+|+ +++..++.+++++||
T Consensus 44 ~g~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG~-~a~~~a~~~~~~~gd 118 (385)
T TIGR01825 44 LGFADHPRLKEAAAQAIQQYG-VGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSGF-NTNQGVLSALLRKGD 118 (385)
T ss_pred cCCCCCHHHHHHHHHHHHHcC-CCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcHH-HHHHHHHHHhCCCCC
Confidence 455 6788898888887532 22345888889999999999999888772 4568888885 566688888998888
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.|+++.|+|..+...+...|.++..++ .+|++.+++.+..... +++++|++++++||||.+.+ ++
T Consensus 119 ----~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~-~~~~~v~~~~v~~~tG~~~~---~~ 183 (385)
T TIGR01825 119 ----IVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPS-YGKKLIVTDGVFSMDGDVAP---LP 183 (385)
T ss_pred ----EEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhcc-CCCeEEEEecCCcCCCCccC---HH
Confidence 999999999999888888888877653 5688889888775311 25788888899999999877 78
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|.++|++||+++|+||+|..+.++.... .....+ ++. ...++++.||||.+ |++| ||++ ++++++
T Consensus 184 ~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~~~~--~~~----~~~~i~~~s~sK~~-~~~g---G~~~---~~~~~~ 249 (385)
T TIGR01825 184 EIVELAERYGAVTYVDDAHGSGVMGEAGR-GTVHHF--GLE----DKVDIQVGTLSKAI-GVVG---GYAA---GHKELI 249 (385)
T ss_pred HHHHHHHHhCCEEEEECcccccCcCCCCC-ccHhhc--CCC----cCCcEEEEeccHHh-hcCC---CEEe---cCHHHH
Confidence 89999999999999999998766542111 111111 111 12378889999999 6655 9987 788899
Q ss_pred HHHHHhhhcc--cC-cchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 262 AMLHKSISAM--LC-PTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 262 ~~l~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+.+......+ .+ .+.. .+.++..+++ ...+ ..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~al~----------~~~~-~~ 284 (385)
T TIGR01825 250 EYLKNRARPFLFSTAQPPA----------------------------------VVAALAAAVD----------ELQR-SP 284 (385)
T ss_pred HHHHHhCccccccCCCCHH----------------------------------HHHHHHHHHH----------HHhc-CH
Confidence 8887543211 11 1222 2222222211 0000 12
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
+..+.+.++++++.+.|+++ |+++..+.++++.+. +..+. .+..+...++++ ||.+. +..|+..
T Consensus 285 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~-~~~~~------------~~~~~~~~L~~~-gi~v~-~~~~~~~ 348 (385)
T TIGR01825 285 ELMERLWDNTRFFKAGLGKL-GYDTGGSETPITPVV-IGDEK------------AAQEFSRRLFDE-GIFAQ-SIVFPTV 348 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEEE-ECCHH------------HHHHHHHHHHHC-CcEEc-ccCCCCC
Confidence 35566777889999999887 888877776655442 32110 134455555555 99885 4444320
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEK 496 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~ 496 (509)
+ .+.. ++|+++. +++++|++++++
T Consensus 349 ~----------------------------------------------~~~~--------~iRi~~~~~~~~e~i~~~~~~ 374 (385)
T TIGR01825 349 P----------------------------------------------RGTA--------RIRNIPTAEHTKDDLDQALDA 374 (385)
T ss_pred C----------------------------------------------CCCc--------eEEEEEcCCCCHHHHHHHHHH
Confidence 0 1222 8999864 899999999999
Q ss_pred HHHHHHH
Q psy13922 497 FREFHEE 503 (509)
Q Consensus 497 l~~~~~~ 503 (509)
|++++++
T Consensus 375 l~~~~~~ 381 (385)
T TIGR01825 375 YEKVGKE 381 (385)
T ss_pred HHHHHHH
Confidence 9998864
No 123
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=2.6e-25 Score=231.32 Aligned_cols=217 Identities=15% Similarity=0.168 Sum_probs=153.4
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCC---C
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDG---K 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~---~ 103 (509)
.+.+.+++.+++..... ....|+ .++++++++++.+..+ .+++++|+|+++|+..+++.++..+++ .
T Consensus 57 ~p~v~~a~~~~~~~~~~-~~~~~~-----~~~~~~la~~l~~~~~----~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~ 126 (396)
T PRK02627 57 HPKLVEAIQEQAAKLIH-TSNLYY-----IEPQEELAEKLVELSG----MDKVFFCNSGAEANEAAIKLARKYGHKKGIE 126 (396)
T ss_pred CHHHHHHHHHHHhhccc-cccccC-----CHHHHHHHHHHHhhcC----CCEEEECCCcHHHHHHHHHHHHHHhcccCCC
Confidence 37899999888876321 111132 5678888888876644 479999999999999999988765531 1
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCEE-EE---EecCCCCCC----CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC-CC
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNMEQ-IG---YYLDESKQW----GLPISELERSITEARKHCNPRAIVIINPGNPTG-QV 174 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~~-~~---v~~~~~~~~----~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG-~~ 174 (509)
++.|++..+.|+++.......+... .. .+..+ ++ ..|++.+++.+.+ ++++|++++++||+| ..
T Consensus 127 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~i~~-----~~~~vii~p~~~~~G~~~ 199 (396)
T PRK02627 127 KPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVE--GFIYVPFNDIEALKAAITD-----KTAAVMLEPIQGEGGVNP 199 (396)
T ss_pred CCeEEEECCCcCcccHHHHHhcCCccccccCCCCCC--CceEeCCCCHHHHHHhcCC-----CeEEEEEecccCCCCCcc
Confidence 1489999999998866655443221 11 11111 11 2288999998865 799999998899999 68
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
++++++++|.++|++||+++|+||+|.+|.+.+ .+.+.... +.. .+ +.+|||.+ | +|+|+||++
T Consensus 200 ~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g--~~~~~~~~--~~~-----pd---i~t~sK~~-~-~G~rig~~~-- 263 (396)
T PRK02627 200 ADKEYLQALRELCDENGILLILDEVQTGMGRTG--KLFAYQHY--GIE-----PD---IMTLAKGL-G-GGVPIGAVL-- 263 (396)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhcCCCccC--ceeeehhc--CCC-----CC---EEEEcchh-h-CCcccEEEE--
Confidence 999999999999999999999999999886654 22222111 111 11 33789999 6 899999998
Q ss_pred cCCHHHHHHHHHhhh-cccCcchh
Q psy13922 255 NLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 255 ~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
+++++++.+..... ...+.+.+
T Consensus 264 -~~~~~~~~~~~~~~~~t~~~~~~ 286 (396)
T PRK02627 264 -AKEKVADVFTPGDHGSTFGGNPL 286 (396)
T ss_pred -EcHHHHhccCCCCCCCCCCCCHH
Confidence 78888888764322 33445555
No 124
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.6e-24 Score=223.37 Aligned_cols=374 Identities=15% Similarity=0.183 Sum_probs=260.7
Q ss_pred chHHHHHHHHhhcCC-----CCCC---CCCCCHHHHHHHHHHHhcccCCCc-ccCCCCc----chHHHHHHHHHHHhhhc
Q psy13922 4 VFSLSLQVLALVSLP-----QLFD---DPRFPDDVKQRAQAVLDGCRGQSV-GSYTDSP----GIEIIRRHVAQYISRRD 70 (509)
Q Consensus 4 ~~~~~~~~~~~~~~~-----~~~~---~~~~p~~v~~a~~~~l~~~~~~~~-~~Y~~~~----g~~~lr~~va~~l~~~~ 70 (509)
+...+|+-+...... .+++ ....|..|++++.+.+........ +.|.... -+++.|+.++++++
T Consensus 4 ~~~~~r~~fp~l~~~~~~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~--- 80 (405)
T COG0520 4 DVAAVRADFPALKREVGKPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN--- 80 (405)
T ss_pred ChHHHHhhCHHHhhccCCCeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhC---
Confidence 344566666655432 2343 333589999999998875332222 2233332 45678888888884
Q ss_pred CCCCC-CCcEEEeCCHHHHHHHHHHHh---hcCCCCCCCeEEEcCCCChh----HHHHHHhcCCEEEEEecCCCCCCCCC
Q psy13922 71 GQPAD-WQDVILSAGASDGIKSVLKLL---IEDVDGKKPGVLIPIPQYPL----YSASLAEFNMEQIGYYLDESKQWGLP 142 (509)
Q Consensus 71 g~~~~-~~~i~~t~G~~~al~~~~~~l---~~~gd~~~~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d 142 (509)
.+ .++|++|.|+|++++.+..++ .++|| +|+++.-.|++ |....++.|+++..+|.+++ ..+|
T Consensus 81 ---a~~~~eIvft~~tT~aln~va~~l~~~~~~gd----eIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~--g~~~ 151 (405)
T COG0520 81 ---ADSSDEIVFTRGTTEALNLVARGLGRSLKPGD----EIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDD--GLLD 151 (405)
T ss_pred ---CCCCCeEEEeCChhHHHHHHHHHhhhhhcCCC----EEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCC--CCcC
Confidence 45 589999999999999999999 57777 99999988875 55666777999999998844 4889
Q ss_pred HHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhC
Q psy13922 143 ISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMG 222 (509)
Q Consensus 143 ~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~ 222 (509)
.+.++..+++ ++|+|.++..+|.||++.+ +++|+++|+++|+++++|.+++.-. ....+..+.
T Consensus 152 ~~~~~~~i~~-----~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~h-----~~idv~~l~---- 214 (405)
T COG0520 152 LDALEKLITP-----KTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAAGH-----LPIDVQELG---- 214 (405)
T ss_pred HHHHHHhcCC-----CceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECccccCc-----cCCCchhcC----
Confidence 9999998887 8999999999999999988 9999999999999999999987632 233443332
Q ss_pred CCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHh
Q psy13922 223 EPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAV 302 (509)
Q Consensus 223 ~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (509)
.+++++ |..|++.|+.| +|++. ..+++.+.+.....+....... -.+ .....+.....
T Consensus 215 -----~Df~af-sgHKwl~gP~G--iGvLy---~r~~~l~~l~P~~~gg~~~~~~--------~~~---~~~~~~~~p~r 272 (405)
T COG0520 215 -----CDFLAF-SGHKWLLGPTG--IGVLY---VRKELLEELEPFLGGGGMIEYV--------SRD---EGVTLAELPLR 272 (405)
T ss_pred -----CCEEEE-cccccccCCCc--eEEEE---EchHHHhhcCCcccCCCceeee--------ccc---ccccccCcchh
Confidence 225545 88994437557 56665 5888888884333211111111 000 11123444566
Q ss_pred hhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC----CceeEEeecCCC
Q psy13922 303 LDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPV----QGAMYAFPQMKL 378 (509)
Q Consensus 303 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----~~g~~~~~~~~~ 378 (509)
++.++++..+..++..+++ |..... ++++.++.+++.+++.+.|.++|+++++.+ .++.+.| .++
T Consensus 273 fe~gTpn~~~~i~l~aAl~--------~~~~ig-~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF-~v~- 341 (405)
T COG0520 273 FEAGTPNIAGAIGLAAALD--------YLLEIG-MEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSF-NVK- 341 (405)
T ss_pred hccCCchHHHHHhHHHHHH--------HHHHHh-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEE-EeC-
Confidence 7788888777777777765 322222 678999999999999999999999998854 3444444 344
Q ss_pred CHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhh
Q psy13922 379 PAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLE 458 (509)
Q Consensus 379 ~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (509)
|+. ..+ +...|.++||.++.|..|..+ .++.+ .
T Consensus 342 -----------~~~-~~d-v~~~L~~~gI~vr~g~~ca~p-------------------------------~~~~~---~ 374 (405)
T COG0520 342 -----------GIH-PHD-VATLLDEKGIAVRAGHHCAQP-------------------------------LHRLL---G 374 (405)
T ss_pred -----------CCC-HHH-HHHHHHhCCeEEEeccccccH-------------------------------HHHhc---C
Confidence 332 233 567888889999999877652 11111 0
Q ss_pred cccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHHH
Q psy13922 459 RTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~ 502 (509)
. .+ .+|+|+. ++.+||+..++.|+++.+
T Consensus 375 ~------~~----------~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 375 V------DA----------TIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred C------CC----------ceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 0 11 4999988 999999999999988764
No 125
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.94 E-value=9.2e-25 Score=213.63 Aligned_cols=335 Identities=19% Similarity=0.244 Sum_probs=212.2
Q ss_pred cCCCcccC-CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHH--HHHhhc-------CC-CCCCCeEEEc
Q psy13922 42 RGQSVGSY-TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSV--LKLLIE-------DV-DGKKPGVLIP 110 (509)
Q Consensus 42 ~~~~~~~Y-~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~--~~~l~~-------~g-d~~~~~Vlv~ 110 (509)
++..+.+| +...|++++|+-.++++. +++++|++..+++-.|..- ..++.. |. +..+-+.|+|
T Consensus 57 dG~D~RNY~G~l~Gipe~r~l~a~llg------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCP 130 (425)
T PF12897_consen 57 DGTDCRNYPGGLDGIPEARELFAELLG------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCP 130 (425)
T ss_dssp TTEBTTSS-S-SS--HHHHHHHHHHHT------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEE
T ss_pred CCccccCCCCccCChHHHHHHHHHHhC------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEec
Confidence 34566779 889999999999999993 7899999987765444322 222211 11 1123478999
Q ss_pred CCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHH-HH
Q psy13922 111 IPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVI-INPGNPTGQVLTKENIQDIIKF-AH 188 (509)
Q Consensus 111 ~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~i-a~ 188 (509)
.|.|..+....+..|++.+.||+.++ ++|++.+++++.+. +.+|.|+. +..+||||.+||+|-.++|+++ ..
T Consensus 131 vPGYDRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D---~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~A 204 (425)
T PF12897_consen 131 VPGYDRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAED---PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTA 204 (425)
T ss_dssp ES--HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTS---TTEEEEEE-SSS-TTT-----HHHHHHHHHS--S
T ss_pred CCCchHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcC---CccceEEeCCCccCCCCccCCHHHHHHHhcCCcC
Confidence 99999999999999999999999988 88999999998753 36899995 6889999999999999999998 45
Q ss_pred HCCcEEEEcccCCcccccCCCcc---ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 189 REKLFLFADEVYQDNVYAEGSKF---YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 189 ~~~i~lI~Deay~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
..+..|+-|++|....+.++... ..+.+.+.+.+.. .+++.+.|.||... ||.+++++. ++++-++.+.
T Consensus 205 A~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnp---drv~~F~STSKITf--~GaGva~~a---aS~~Nl~~~~ 276 (425)
T PF12897_consen 205 APDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNP---DRVYVFASTSKITF--PGAGVAFFA---ASEANLAWIK 276 (425)
T ss_dssp STT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-T---TSEEEEEESTTTS---TTSS-EEEE---E-HHHHHHHH
T ss_pred CcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCC---CeEEEEeccccccc--CCcceeeee---cCHHHHHHHH
Confidence 68999999999988777433222 2455555555443 45888999999986 999999998 7888888777
Q ss_pred Hhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH-HHHHHHHHHHHH
Q psy13922 266 KSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE-QFSREKQSVLDS 343 (509)
Q Consensus 266 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 343 (509)
+..+ ...++... .|..-..++.+ ++ ....|+++..+.
T Consensus 277 ~~~~~~tIgpdKv----------------------------------NQLRHvrff~d-------~~gGv~aHM~kHa~i 315 (425)
T PF12897_consen 277 KHLSVQTIGPDKV----------------------------------NQLRHVRFFKD-------AEGGVRAHMRKHAAI 315 (425)
T ss_dssp HHHHHH-S---HH----------------------------------HHHHHHHHHHS-------HHTHHHHHHHHHHHH
T ss_pred HHhcCceeCccHH----------------------------------HHHHHHHHhcC-------hhhHHHHHHHHHHHH
Confidence 6655 55666666 34333333321 34 455667777777
Q ss_pred HHHHHHHHHHHHhc-CC---C-CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec-CCCCCC
Q psy13922 344 LKQRAKMVADTFNS-IE---G-MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP-GAGFGQ 417 (509)
Q Consensus 344 ~~~~~~~l~~~L~~-~~---g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p-g~~f~~ 417 (509)
++-+.+.+.+.|++ +. + .+|..|.||||++++..- .....+.+++++.||.+.| |..|..
T Consensus 316 l~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~--------------G~AkrvV~lakeAGV~LT~AGAtfPy 381 (425)
T PF12897_consen 316 LRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD--------------GTAKRVVELAKEAGVALTPAGATFPY 381 (425)
T ss_dssp HHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST--------------T-HHHHHHHHHHTTEE---TTTTSGG
T ss_pred HhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC--------------ChHHHHHHHHHHhCceeCCCCCCCCC
Confidence 77777777666655 32 3 578899999999976641 2333478999999999999 554433
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEK 496 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~ 496 (509)
++.|....|||+-+ .+.++++.|++.
T Consensus 382 -----------------------------------------------------g~DP~D~nIRiAPS~P~leel~~Am~~ 408 (425)
T PF12897_consen 382 -----------------------------------------------------GKDPRDSNIRIAPSYPSLEELETAMDV 408 (425)
T ss_dssp -----------------------------------------------------G--TTS-EEEE--SSS-HHHHHHHHHH
T ss_pred -----------------------------------------------------CCCCCCCcEEecCCCCCHHHHHHHHHH
Confidence 22233448999999 888999999999
Q ss_pred HHHHHHHH
Q psy13922 497 FREFHEEF 504 (509)
Q Consensus 497 l~~~~~~~ 504 (509)
+.-+++-.
T Consensus 409 ~~~cv~la 416 (425)
T PF12897_consen 409 FATCVKLA 416 (425)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887643
No 126
>PLN02483 serine palmitoyltransferase
Probab=99.94 E-value=3.1e-24 Score=227.80 Aligned_cols=317 Identities=15% Similarity=0.170 Sum_probs=213.2
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEE
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQ 128 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~ 128 (509)
|+...+..++++++|++++ .++.|++++|.. +...++.+++++|| .|+++.|+|.++...++..|+++
T Consensus 142 ~g~~~~~~ele~~lA~~~g-------~~~ai~~~~G~~-an~~~i~al~~~Gd----~Vi~d~~~h~s~~~~~~~~Ga~v 209 (489)
T PLN02483 142 GGTTKLHRELEELVARFVG-------KPAAIVFGMGYA-TNSTIIPALIGKGG----LIISDSLNHNSIVNGARGSGATI 209 (489)
T ss_pred cCCcHHHHHHHHHHHHHhC-------CCcEEEECCHHH-HHHHHHHHhCCCCC----EEEEcchhhHHHHHHHHHcCCeE
Confidence 8888888999999999994 356777777654 55577888999998 99999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHhhhcc--CC-----ceEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 129 IGYYLDESKQWGLPISELERSITEARKH--CN-----PRAIVII-NPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 129 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~--~~-----~~~ivi~-~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
+.++.+ |++.+++.+++.... ++ .++++++ ...|++|...+ +++|+++|++||++||+||+|
T Consensus 210 ~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~ 279 (489)
T PLN02483 210 RVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAH 279 (489)
T ss_pred EEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcC
Confidence 999854 567777666542110 12 2555554 56799999966 999999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhc--cc-Ccchh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISA--ML-CPTVL 277 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~--~~-~~~~~ 277 (509)
+....+. ...+..+.. ++.. ....|+++||||.+ |++| ||++ +++++++.++..... +. ..+..
T Consensus 280 s~g~~G~--~G~g~~~~~-~v~~---~~~dI~~~SfSKs~-g~~G---G~i~---~~~~li~~l~~~~~~~~~~~~~~p~ 346 (489)
T PLN02483 280 SIGAVGK--TGRGVCELL-GVDP---ADVDIMMGTFTKSF-GSCG---GYIA---GSKELIQYLKRTCPAHLYATSMSPP 346 (489)
T ss_pred ccCccCC--CCCchHHhc-CCCc---ccCcEEEEecchhc-ccCc---eEEE---cCHHHHHHHHHhCccccccCCcCHH
Confidence 8544321 112222221 1111 12367889999999 6766 9998 899999999875331 11 11222
Q ss_pred hhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy13922 278 ALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS 357 (509)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 357 (509)
. .|. ..++++.+...+ ..++..+.++.++++++++.+.|++
T Consensus 347 ~-----------------~~~-------------~~aaL~~l~~~~---------g~~~~~~~~~~l~~~~~~l~~~L~~ 387 (489)
T PLN02483 347 A-----------------VQQ-------------VISAIKVILGED---------GTNRGAQKLAQIRENSNFFRSELQK 387 (489)
T ss_pred H-----------------HHH-------------HHHHHHHHHhCc---------cccchHHHHHHHHHHHHHHHHHHHH
Confidence 0 110 122232222100 0011344567899999999999999
Q ss_pred CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHH
Q psy13922 358 IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRA 437 (509)
Q Consensus 358 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~ 437 (509)
+ |+.+..+.++..+|+.+..+.. ...+..+++ ++||.++| ..|...+
T Consensus 388 ~-G~~v~~~~~sp~~~l~l~~~~~------------~~~~~~~Ll-~~GI~v~~-~~fp~~p------------------ 434 (489)
T PLN02483 388 M-GFEVLGDNDSPVMPIMLYNPAK------------IPAFSRECL-KQNVAVVV-VGFPATP------------------ 434 (489)
T ss_pred C-CCcccCCCCCCEEEEEECCHHH------------HHHHHHHHH-HCCcEEee-eCCCCCC------------------
Confidence 8 8877766655565544432221 223455555 56999997 4443210
Q ss_pred HHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHHHHHHhhc
Q psy13922 438 IAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHEEFLAKY 508 (509)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~~~~~~ 508 (509)
.+.+ ++|++++ +++++|++++++|.++++.+.-||
T Consensus 435 ----------------------------~~~~--------~vRi~isa~~t~edId~~l~~L~~~~~~~~~~~ 471 (489)
T PLN02483 435 ----------------------------LLLA--------RARICISASHSREDLIKALEVISEVGDLVGIKY 471 (489)
T ss_pred ----------------------------CCCc--------eEEEEeCCCCCHHHHHHHHHHHHHHHHHhCcee
Confidence 1112 7888876 799999999999999998877665
No 127
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=1.8e-24 Score=225.45 Aligned_cols=354 Identities=16% Similarity=0.215 Sum_probs=229.1
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCc-ccCC----CCcchHHHHHHHHHHHhhhcCCCCC-CCcEEEeCCHHHHHHHHHHHh
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSV-GSYT----DSPGIEIIRRHVAQYISRRDGQPAD-WQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~-~~Y~----~~~g~~~lr~~va~~l~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l 96 (509)
....|..+.+++.+.+........ ..|. ......++|+.++++++ .+ +++|++|+|++++++.++.++
T Consensus 27 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~~v~~~~g~t~~l~~~~~~~ 100 (403)
T TIGR01979 27 TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDEEIVFTRGTTESINLVAYSW 100 (403)
T ss_pred ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCCeEEEeCCHHHHHHHHHHHh
Confidence 334678899999888775321111 0011 12355688899999883 33 679999999999999999886
Q ss_pred ----hcCCCCCCCeEEEcCCCChhH----HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 97 ----IEDVDGKKPGVLIPIPQYPLY----SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 97 ----~~~gd~~~~~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
.++|+ +|+++.+.|.+. ...++..|++++.++.+++ +.+|++.+++.+.+ ++++|++++|+
T Consensus 101 ~~~~~~~g~----~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~i~~-----~~~lv~~~~~~ 169 (403)
T TIGR01979 101 GDSNLKAGD----EIVISEMEHHANIVPWQLLAERTGATLKFIPLDDD--GTLDLDDLEKLLTE-----KTKLVAITHVS 169 (403)
T ss_pred hhhcCCCCC----EEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCC--CCCCHHHHHHHhcc-----CCeEEEEEccc
Confidence 35666 999999987763 3455678999999998744 47899999999977 79999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 169 NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 169 NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
||||..++ +++|.++|+++|+++|+|++|+.... ...+... .. .+++.|++|.+ |++| +
T Consensus 170 ~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~-----~~~~~~~---------~~-d~~~~s~~K~~-gp~G--~ 228 (403)
T TIGR01979 170 NVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHM-----PVDVQAL---------DC-DFYVFSGHKMY-GPTG--I 228 (403)
T ss_pred ccccccCC---HHHHHHHHHHcCCEEEEEchhhcCcc-----ccCcccc---------CC-CEEEEeccccc-CCCC--c
Confidence 99999998 88899999999999999999975321 1122111 11 35567999988 7777 7
Q ss_pred EEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC
Q psy13922 249 GYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 328 (509)
|++. .++++++.+......+...... .+....+.. ....++.++.......++..+++
T Consensus 229 g~l~---~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~-----~~~~~~~gt~~~~~~~al~~al~------- 286 (403)
T TIGR01979 229 GVLY---GKEELLEQMPPFLGGGEMIAEV-------SFEETTYNE-----APHKFEAGTPNIAGVIGLGAAID------- 286 (403)
T ss_pred eEEE---EchHHHhcCCCeecCCCceeec-------ccCccccCC-----ChhhcCCCCccHHHHHHHHHHHH-------
Confidence 8886 4777776654322111000000 000000000 00112222222223334433322
Q ss_pred chHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC-----ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHH
Q psy13922 329 SYEQFSR-EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ-----GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELL 402 (509)
Q Consensus 329 ~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll 402 (509)
.+.+ ..+.++++..++++.+.+.|+.+++++++.+. ++++.+ .+. +. +..+ +...|
T Consensus 287 ---~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~-~~~------------~~-~~~~-~~~~L 348 (403)
T TIGR01979 287 ---YLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISF-NVE------------GV-HPHD-VGTIL 348 (403)
T ss_pred ---HHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEE-EeC------------Cc-CHHH-HHHHH
Confidence 1111 15677888888999999999988888887543 455544 333 11 1233 45678
Q ss_pred hhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEE
Q psy13922 403 ERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTT 482 (509)
Q Consensus 403 ~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls 482 (509)
+++||.+.+|..|..+ ++..+ ...+ ++|+|
T Consensus 349 ~~~gI~v~~g~~~~~~-------------------------------~~~~~-----------~~~~--------~iRiS 378 (403)
T TIGR01979 349 DEEGIAVRSGHHCAQP-------------------------------LMRRF-----------GVPA--------TCRAS 378 (403)
T ss_pred hhCCEEEcchhhhhHH-------------------------------HHHHh-----------CCCC--------EEEEE
Confidence 8899999987754330 00000 0112 89999
Q ss_pred ee--cChHHHHHHHHHHHHHHHHH
Q psy13922 483 IL--PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 483 ~~--~~~~~i~~~~~~l~~~~~~~ 504 (509)
+. +++++++.+++.|+++++.+
T Consensus 379 ~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 379 FYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred eccCCCHHHHHHHHHHHHHHHHHh
Confidence 98 79999999999999877654
No 128
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.94 E-value=1.9e-24 Score=221.57 Aligned_cols=340 Identities=12% Similarity=0.111 Sum_probs=216.0
Q ss_pred CCCCCCCHHHHHHHHHHHhcccCCCcccCCCC-cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDS-PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 21 ~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~-~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
.|++..|+.+++++.+.+.. ..|+.. .-..++++.+++++ |.+ ..+.+++|+|+++++..++.++..+
T Consensus 5 ~~~~~~~~~v~~a~~~~~~~------~~~~~~~~~~~~~~~~la~~~----g~~-~~~~~~~~~~~t~al~~~~~~~~~~ 73 (356)
T cd06451 5 PGPSNVPPRVLKAMNRPMLG------HRSPEFLALMDEILEGLRYVF----QTE-NGLTFLLSGSGTGAMEAALSNLLEP 73 (356)
T ss_pred CCCcCCCHHHHHHhCCCccC------CCCHHHHHHHHHHHHHHHHHh----cCC-CCCEEEEecCcHHHHHHHHHHhCCC
Confidence 36677889999998644322 113211 11234555555555 531 3345788999999999999999988
Q ss_pred CCCCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 100 VDGKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
|+ .|+++.++|.+ +...++..|++++.++.+++ +.+|++.+++.+++. ++++|++++|+||+|.+++
T Consensus 74 g~----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~i~~~----~~~~v~i~~~~~~~G~~~~- 142 (356)
T cd06451 74 GD----KVLVGVNGVFGDRWADMAERYGADVDVVEKPWG--EAVSPEEIAEALEQH----DIKAVTLTHNETSTGVLNP- 142 (356)
T ss_pred CC----EEEEecCCchhHHHHHHHHHhCCCeEEeecCCC--CCCCHHHHHHHHhcc----CCCEEEEeccCCCcccccC-
Confidence 88 99999888765 56677888999999998754 578999999999753 6899999999999999988
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++|.++|+++|+++|+|++|.... ...++... +.+++ +.|.+|.+ |.| .++||++ .+
T Consensus 143 --~~~i~~~a~~~~~~li~D~~~~~g~-----~~~~~~~~---------~~d~~-~~s~~K~l-~~p-~g~G~l~---~~ 200 (356)
T cd06451 143 --LEGIGALAKKHDALLIVDAVSSLGG-----EPFRMDEW---------GVDVA-YTGSQKAL-GAP-PGLGPIA---FS 200 (356)
T ss_pred --HHHHHHHHHhcCCEEEEeeehhccC-----cccccccc---------CccEE-EecCchhc-cCC-CCcceeE---EC
Confidence 7788889999999999999886311 11111111 12254 55889999 433 3689998 57
Q ss_pred HHHHHHHHH--hhhcc-cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHH
Q psy13922 258 PGVKAMLHK--SISAM-LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFS 334 (509)
Q Consensus 258 ~~~~~~l~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 334 (509)
+++++.+.. ....+ ........ ...... ...+......+.++..++. +- ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~------------~~~~t~~~~~~~a~~aal~--------~l-~~ 254 (356)
T cd06451 201 ERALERIKKKTKPKGFYFDLLLLLK-----YWGEGY------------SYPHTPPVNLLYALREALD--------LI-LE 254 (356)
T ss_pred HHHHHHHHhcCCCCceeecHHHHHh-----hhcccC------------CCCCCChHHHHHHHHHHHH--------HH-HH
Confidence 788877753 00000 00000000 000000 0000000001222222221 00 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC---CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 335 REKQSVLDSLKQRAKMVADTFNSIEGMSCNPV---QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 335 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
..++...+..+++++++.+.|..+ |+++..+ .+++++|+.++ . +. +...++..+.++.||.+.+
T Consensus 255 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~---------~~-~~~~~~~~L~~~~gI~~~~ 321 (356)
T cd06451 255 EGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLVP--E---------GV-DGDEVVRRLMKRYNIEIAG 321 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEECC--C---------CC-CHHHHHHHHHHhCCEEEec
Confidence 125677788889999999999988 8777532 24555665443 1 11 2344444444444999998
Q ss_pred CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHH
Q psy13922 412 GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEK 489 (509)
Q Consensus 412 g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~ 489 (509)
|..+.. ++ ++|+|++ +++++
T Consensus 322 g~~~~~------------------------------------------------~~----------~iRis~~~~~~~e~ 343 (356)
T cd06451 322 GLGPTA------------------------------------------------GK----------VFRIGHMGEATRED 343 (356)
T ss_pred cccccc------------------------------------------------CC----------EEEEecCCCCCHHH
Confidence 774322 22 8999997 78999
Q ss_pred HHHHHHHHHHHH
Q psy13922 490 LKAMLEKFREFH 501 (509)
Q Consensus 490 i~~~~~~l~~~~ 501 (509)
++.+++.|++++
T Consensus 344 v~~~~~~l~~~~ 355 (356)
T cd06451 344 VLGVLSALEEAL 355 (356)
T ss_pred HHHHHHHHHHHh
Confidence 999999998865
No 129
>PLN02721 threonine aldolase
Probab=99.94 E-value=4.8e-24 Score=218.15 Aligned_cols=321 Identities=14% Similarity=0.128 Sum_probs=205.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-CCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-DVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~~~~ 105 (509)
++.+.+++.+.... .....|++. ..+++++++++++. +.+++++++++++..++..+++ +||
T Consensus 19 ~~~~~~a~~~~~~~---~~~~~~~~~--~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~~~l~~~~~~~gd---- 81 (353)
T PLN02721 19 TDAMRAAMANAEVD---DDVLGYDPT--ALRLEEEMAKIFGK--------EAALFVPSGTMGNLISVLVHCDVRGS---- 81 (353)
T ss_pred CHHHHHHHHhccCC---CcccCCCHH--HHHHHHHHHHHhCC--------ceeEEecCccHHHHHHHHHHccCCCC----
Confidence 35666666543111 222324433 58999999999942 2345555556666677777776 888
Q ss_pred eEEEcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc--CCceEEEEeC-CCCCCCCCCCHHH
Q psy13922 106 GVLIPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH--CNPRAIVIIN-PGNPTGQVLTKEN 179 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~--~~~~~ivi~~-p~NPtG~~~s~~~ 179 (509)
.|+++.|+|..... .+...|++++.++.+++ +.+|++.+++.+++..+. +++++|++++ +|||+|.+++.++
T Consensus 82 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~ 159 (353)
T PLN02721 82 EVILGDNSHIHLYENGGISTLGGVHPRTVKNNED--GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEY 159 (353)
T ss_pred eEEEcCccceehhcccchhhhcCceeEecCCCcC--CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHH
Confidence 99999999865544 56778999999987644 578999999999742110 2689999965 6899999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|+++|+++|+|++|....... ...+....... ...+++ |+||.+ |. ++||+++ ++++
T Consensus 160 l~~l~~l~~~~g~~livD~a~~~~~~~~--~~~~~~~~~~~-------~d~~~~-s~sK~l-~~---~~G~~~~--~~~~ 223 (353)
T PLN02721 160 TDKVGELAKRHGLKLHIDGARIFNASVA--LGVPVHRLVKA-------ADSVSV-CLSKGL-GA---PVGSVIV--GSKS 223 (353)
T ss_pred HHHHHHHHHHcCCEEEEEchhhhcchhh--hCCCHHHHhhh-------CCEEEE-eccccc-CC---ceeeEEe--cCHH
Confidence 9999999999999999999985422110 01122222211 124434 799998 42 4666432 7899
Q ss_pred HHHHHHHhhhcccC-cchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLC-PTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+........+ .+..+.. ...++.. ++.+ .+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~-----------l~~~---~~ 258 (353)
T PLN02721 224 FIRKAKRLRKTLGGGMRQVGVL-------------------------------AAAALVA-----------LQEN---VP 258 (353)
T ss_pred HHHhHHHHHHhcCCCeehhHHH-------------------------------HHHHHHH-----------HHHH---HH
Confidence 99988766553221 1111000 1111111 1112 22
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCee--ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSC--NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
++. ...++++.+.+.|++++++.+ .++.++ ++|+++.... +. +... +.+.|.++||.++|+.
T Consensus 259 ~~~-~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~-~~~~-~~~~L~~~gi~v~~~~--- 322 (353)
T PLN02721 259 KLE-DDHKKAKLLAEGLNQIKGLRVNVAAVETN-IVYFDITDGS---------RI-TAEK-LCKSLEEHGVLLMPGN--- 322 (353)
T ss_pred HHH-HHHHHHHHHHHHHHhCCCcEEecCCccce-EEEEEccCCc---------cc-cHHH-HHHHHHhCCcEEecCC---
Confidence 222 235567889999998877754 344444 5776664110 11 2344 3555568899999753
Q ss_pred CCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHH
Q psy13922 417 QVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAML 494 (509)
Q Consensus 417 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~ 494 (509)
.+ ++|+++. ++++++++++
T Consensus 323 -------------------------------------------------~~----------~lR~~~~~~~~~~~i~~~~ 343 (353)
T PLN02721 323 -------------------------------------------------SS----------RIRVVTHHQISDSDVQYTL 343 (353)
T ss_pred -------------------------------------------------Cc----------eEEEEecCcCCHHHHHHHH
Confidence 22 8999986 7999999999
Q ss_pred HHHHHHHH
Q psy13922 495 EKFREFHE 502 (509)
Q Consensus 495 ~~l~~~~~ 502 (509)
++|++++.
T Consensus 344 ~~l~~~~~ 351 (353)
T PLN02721 344 SCFQQAAL 351 (353)
T ss_pred HHHHHHhh
Confidence 99998764
No 130
>PRK02948 cysteine desulfurase; Provisional
Probab=99.94 E-value=6.2e-25 Score=227.31 Aligned_cols=347 Identities=14% Similarity=0.137 Sum_probs=219.8
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCcccCCC----CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVGSYTD----SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~----~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
....|+.+++++.+.++.........|.. ..-..++|+.+++++ | .++++|++|+|+++++..++.++..
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~i~~~~g~t~a~~~~~~~~~~ 82 (381)
T PRK02948 9 TTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMI----G--GEEQGIYFTSGGTESNYLAIQSLLN 82 (381)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 34568899999988887532111111211 112345666777766 4 4678999999999999999988863
Q ss_pred ----CCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC
Q psy13922 99 ----DVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPT 171 (509)
Q Consensus 99 ----~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt 171 (509)
+++ .|+++...|..+. ..++..|+++..++.+++ +.+|++.|++.+++ ++++|++++|+|||
T Consensus 83 ~~~~~g~----~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~-----~~~lv~~~~~~n~t 151 (381)
T PRK02948 83 ALPQNKK----HIITTPMEHASIHSYFQSLESQGYTVTEIPVDKS--GLIRLVDLERAITP-----DTVLASIQHANSEI 151 (381)
T ss_pred hccCCCC----EEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCC--CCCCHHHHHHhcCC-----CCEEEEEECCcCCc
Confidence 455 8999886666544 446677999999998754 47899999998876 78999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 172 GQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 172 G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
|.+++ +++|.++|+++|+++|+|+++..... ...+.. . +. .+++.|+||.+ |++| +|++
T Consensus 152 G~~~~---~~~I~~l~~~~~~~vivD~~~~~g~~-----~~~~~~----~-----~~-d~~~~s~~K~~-gp~G--~G~l 210 (381)
T PRK02948 152 GTIQP---IAEIGALLKKYNVLFHSDCVQTFGKL-----PIDVFE----M-----GI-DSLSVSAHKIY-GPKG--VGAV 210 (381)
T ss_pred Eeehh---HHHHHHHHHHcCCEEEEEChhhcccc-----ccCccc----C-----CC-CEEEecHHhcC-CCCc--EEEE
Confidence 99988 77899999999999999976643211 111111 1 11 34467999999 7888 6777
Q ss_pred eeecCCHHH-HHHHHHhh--h---cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCC
Q psy13922 252 EVINLDPGV-KAMLHKSI--S---AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQP 325 (509)
Q Consensus 252 ~~~~~~~~~-~~~l~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 325 (509)
+ .++++ ...+.... . ..+.++.+ ++.++..+++
T Consensus 211 ~---~~~~~~~~~~~~~~~~~~~~~~~t~~~~----------------------------------~~~a~~~al~---- 249 (381)
T PRK02948 211 Y---INPQVRWKPVFPGTTHEKGFRPGTVNVP----------------------------------GIAAFLTAAE---- 249 (381)
T ss_pred E---EcCCCCCCCcccCCCCCCCcCCCCccHH----------------------------------HHHHHHHHHH----
Confidence 6 24332 11010000 0 11223333 4555555432
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC-ceeEE--eecCCCCHHHHHHHhhcCCCCcHHHHHHHH
Q psy13922 326 GEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ-GAMYA--FPQMKLPAKAIAKAKAEGKCPSVLYAFELL 402 (509)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll 402 (509)
...+++++.++.++++++++.+.|+++ ++++.+.. ..+.. .+.+..+ ++. .+++ ...|
T Consensus 250 ------~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~----------~~~-~~~~-~~~l 310 (381)
T PRK02948 250 ------NILKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIK----------GIE-GQYT-MLEC 310 (381)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeC----------CCC-HHHH-HHhc
Confidence 222457888899999999999999988 66554322 12111 1111111 222 3333 3456
Q ss_pred hhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEE
Q psy13922 403 ERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTT 482 (509)
Q Consensus 403 ~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls 482 (509)
+++||.+++|..|... ..+.-.+++.+|.......+ ++|+|
T Consensus 311 ~~~gI~v~~g~~c~~~-------------------------------~~~p~~~~~~~~~~~~~~~~--------~lRis 351 (381)
T PRK02948 311 NRRGIAISTGSACQVG-------------------------------KQEPSKTMLAIGKTYEEAKQ--------FVRFS 351 (381)
T ss_pred ccCCEEEEchHhcCCC-------------------------------CCCCCHHHHHcCCChHHhCc--------eEEEE
Confidence 7889999998865431 00001111222110001112 89999
Q ss_pred ee--cChHHHHHHHHHHHHHHHHHHh
Q psy13922 483 IL--PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 483 ~~--~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
+. +++++++..++.|+++++++..
T Consensus 352 ~~~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 352 FGQQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 98 8999999999999999876654
No 131
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=4.1e-24 Score=218.23 Aligned_cols=329 Identities=15% Similarity=0.154 Sum_probs=212.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhcccCCCcccCCC----CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH
Q psy13922 20 LFDDPRFPDDVKQRAQAVLDGCRGQSVGSYTD----SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL 95 (509)
Q Consensus 20 ~~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~----~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 95 (509)
.+|.+. |+.+++++++.+++.. .....|.. .....++++.+++++ +. ++.++++++++++..++.+
T Consensus 11 ~~~~~~-~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~la~~~----~~----~~~iv~~sg~~a~~~~~~~ 80 (349)
T cd06454 11 YLGLAN-HPEVIEAAKEALDKYG-VGAGGSRLISGTSDLHEELEEELAEFH----GK----EAALVFSSGYAANDGVLST 80 (349)
T ss_pred ccccCC-CHHHHHHHHHHHHHhC-CCCCCcCeecCCchHHHHHHHHHHHHh----CC----CCEEEeccHHHHHHHHHHH
Confidence 344443 3779999999998632 11122322 223355666666655 42 2345555667788888888
Q ss_pred hhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCC
Q psy13922 96 LIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVL 175 (509)
Q Consensus 96 l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~ 175 (509)
++++|| .|+++.|+|.++...++..|++++.++ .+|.+.+++.+++.....+++++++++++||||...
T Consensus 81 ~~~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~ 149 (349)
T cd06454 81 LAGKGD----LIISDSLNHASIIDGIRLSGAKKRIFK-------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA 149 (349)
T ss_pred hcCCCC----EEEEehhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc
Confidence 888888 999999999999888899999998775 247888998887632112577888899999999986
Q ss_pred CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeec
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN 255 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~ 255 (509)
+ +++|+++|+++|+++|+|++|....+... ...+..+.. . ....+++++|+||.+ |++| ||++
T Consensus 150 ~---~~~i~~~~~~~~~~livD~a~~~g~~~~~--~~~~~~~~~--~---~~~~~i~~~s~sK~~-~~~g---G~i~--- 212 (349)
T cd06454 150 P---LPELVDLAKKYGAILFVDEAHSVGVYGPH--GRGVEEFGG--L---TDDVDIIMGTLGKAF-GAVG---GYIA--- 212 (349)
T ss_pred C---HHHHHHHHHHcCCEEEEEccccccccCCC--CCChhhhcc--c---cccCcEEEeechhhh-cccC---CEEE---
Confidence 6 88999999999999999999975433211 111111110 0 122367788999999 5544 8887
Q ss_pred CCHHHHHHHHHhhhcc---cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 256 LDPGVKAMLHKSISAM---LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 256 ~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
.++++++.+......+ ...+.. ...++...++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~----------- 247 (349)
T cd06454 213 GSKELIDYLRSYARGFIFSTSLPPA----------------------------------VAAAALAALE----------- 247 (349)
T ss_pred CCHHHHHHHHHhchhhhccCCCCHH----------------------------------HHHHHHHHHH-----------
Confidence 7888888776543211 122222 2222222211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecC
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPG 412 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg 412 (509)
+..+....++.+.++++.+.+.|.++ ++....+.++++.++.+..+. +..++. ..|.++||.+.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~~~------------~~~~~~-~~L~~~gI~~~~~ 313 (349)
T cd06454 248 VLQGGPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDDPA------------KAVAFS-DALLERGIYVQAI 313 (349)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCChH------------HHHHHH-HHHHhCCceEEEe
Confidence 11113556788888999999999887 777665555555553232111 133434 4445559999986
Q ss_pred CCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHH
Q psy13922 413 AGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKL 490 (509)
Q Consensus 413 ~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i 490 (509)
...... .+.+ ++|+++. ++++++
T Consensus 314 ~~~~~~-----------------------------------------------~~~~--------~iRi~~~~~~~~~~i 338 (349)
T cd06454 314 RYPTVP-----------------------------------------------RGTA--------RLRISLSAAHTKEDI 338 (349)
T ss_pred cCCccC-----------------------------------------------CCCC--------eEEEEEeCCCCHHHH
Confidence 321110 1122 8999998 799999
Q ss_pred HHHHHHHHHH
Q psy13922 491 KAMLEKFREF 500 (509)
Q Consensus 491 ~~~~~~l~~~ 500 (509)
++++++|+++
T Consensus 339 ~~~~~~l~~~ 348 (349)
T cd06454 339 DRLLEALKEV 348 (349)
T ss_pred HHHHHHHHHh
Confidence 9999999764
No 132
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=1.6e-24 Score=227.47 Aligned_cols=355 Identities=13% Similarity=0.170 Sum_probs=232.2
Q ss_pred CCCCHHHHHHHHHHHhcccCCC--cccCCC---CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh--
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQS--VGSYTD---SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-- 96 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~--~~~Y~~---~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-- 96 (509)
...|+.+++++.+.+....... ...|.. .....++|+.++++++. . ++++|++|+|++++++.+++.+
T Consensus 42 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~----~-~~~~v~~t~g~t~al~~i~~~~~~ 116 (424)
T PLN02855 42 SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINA----S-TSREIVFTRNATEAINLVAYTWGL 116 (424)
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCC----C-CCCEEEEeCCHHHHHHHHHHHhhh
Confidence 3457889999988887642211 111211 12346888899988842 1 3579999999999999999874
Q ss_pred --hcCCCCCCCeEEEcCCCChh----HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 97 --IEDVDGKKPGVLIPIPQYPL----YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 97 --~~~gd~~~~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
.++|+ +|+++.+.|.+ +...++..|++++.++.++++ .+|++.+++.+++ ++++|++++|+||
T Consensus 117 ~~~~~gd----~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~--~~~~~~l~~~i~~-----~t~lv~i~~~~n~ 185 (424)
T PLN02855 117 ANLKPGD----EVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDE--VLDVEQLKELLSE-----KTKLVATHHVSNV 185 (424)
T ss_pred hcCCCcC----EEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCC--CcCHHHHHHHhcc-----CceEEEEeCcccc
Confidence 46777 99999997765 455567789999999987543 5899999999976 7999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 171 TGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
||..++ +++|+++|+++|+++|+|++|.... ....+... +.++ ++.|++|.+ |++| +||
T Consensus 186 tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g~-----~~~~~~~~---------~~d~-~~~s~~K~~-gp~G--~G~ 244 (424)
T PLN02855 186 LGSILP---VEDIVHWAHAVGAKVLVDACQSVPH-----MPVDVQTL---------GADF-LVASSHKMC-GPTG--IGF 244 (424)
T ss_pred ccccCC---HHHHHHHHHHcCCEEEEEhhhhcCC-----cCCCchhc---------CCCE-EEeeccccc-CCCc--cEE
Confidence 999998 7788999999999999999996421 11122211 1224 477999987 7666 788
Q ss_pred EeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 251 SEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 251 v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
++ .++++++.+............. ......+ ......++.|++...+..++..+++ +
T Consensus 245 l~---~~~~~~~~~~p~~~g~~~~~~~-------~~~~~~~-----~~~~~r~e~GT~~~~~~~~l~~al~--------~ 301 (424)
T PLN02855 245 LW---GKSDLLESMPPFLGGGEMISDV-------FLDHSTY-----APPPSRFEAGTPAIGEAIGLGAAID--------Y 301 (424)
T ss_pred EE---EchhhhhcCCCEecCCCceeee-------ecCcccc-----CCChhhccCCChHHHHHHHHHHHHH--------H
Confidence 87 5777777654322111100000 0000000 0001123444444445555555543 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC-------ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHh
Q psy13922 331 EQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ-------GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLE 403 (509)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~ 403 (509)
.. ...+++++++..++++.+.+.|.++++++++.+. ++++. +.++ ++ +.++ +...|.
T Consensus 302 ~~-~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~-~~~~------------~~-~~~~-v~~~L~ 365 (424)
T PLN02855 302 LS-EIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCA-FNVE------------GI-HPTD-LSTFLD 365 (424)
T ss_pred HH-HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEE-EEEC------------Cc-CHHH-HHHHhc
Confidence 11 1136788888999999999999998888877432 23433 3333 22 1233 345555
Q ss_pred hc-CeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEE
Q psy13922 404 RT-GICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTT 482 (509)
Q Consensus 404 ~~-gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls 482 (509)
+. ||.++.|..|.. ..+. .. .-.+ ++|+|
T Consensus 366 ~~~gI~v~~g~~c~~-------------------------------~~~~------~~-----g~~~--------~iRiS 395 (424)
T PLN02855 366 QQHGVAIRSGHHCAQ-------------------------------PLHR------YL-----GVNA--------SARAS 395 (424)
T ss_pred ccCCEEEechhhhhH-------------------------------HHHH------Hh-----CCCC--------eEEEE
Confidence 55 999998886543 1110 00 0012 89999
Q ss_pred ee--cChHHHHHHHHHHHHHHHHH
Q psy13922 483 IL--PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 483 ~~--~~~~~i~~~~~~l~~~~~~~ 504 (509)
+. +++++++..++.|++++.++
T Consensus 396 ~~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 396 LYFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred eccCCCHHHHHHHHHHHHHHHHHH
Confidence 98 89999999999999998774
No 133
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=4.1e-24 Score=223.08 Aligned_cols=372 Identities=15% Similarity=0.174 Sum_probs=242.8
Q ss_pred hHHHHHHHHhhcC-----C-CCC---CCCCCCHHHHHHHHHHHhcccCCC-cccCC----CCcchHHHHHHHHHHHhhhc
Q psy13922 5 FSLSLQVLALVSL-----P-QLF---DDPRFPDDVKQRAQAVLDGCRGQS-VGSYT----DSPGIEIIRRHVAQYISRRD 70 (509)
Q Consensus 5 ~~~~~~~~~~~~~-----~-~~~---~~~~~p~~v~~a~~~~l~~~~~~~-~~~Y~----~~~g~~~lr~~va~~l~~~~ 70 (509)
...+|..+.+... + -++ +....|..+++++.+.+....... .+.|. -..-..++|+.++++++.
T Consensus 5 ~~~~r~~fp~~~~~~~~~~~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-- 82 (406)
T PRK09295 5 VEKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-- 82 (406)
T ss_pred hHHHHhhCccccCcCCCCceEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc--
Confidence 3456666665542 1 233 344568899999988887522111 01111 012346788888888742
Q ss_pred CCCCCCCcEEEeCCHHHHHHHHHHHh----hcCCCCCCCeEEEcCCCChh----HHHHHHhcCCEEEEEecCCCCCCCCC
Q psy13922 71 GQPADWQDVILSAGASDGIKSVLKLL----IEDVDGKKPGVLIPIPQYPL----YSASLAEFNMEQIGYYLDESKQWGLP 142 (509)
Q Consensus 71 g~~~~~~~i~~t~G~~~al~~~~~~l----~~~gd~~~~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d 142 (509)
.++++|++|+|++++++.++.++ .++|| .|+++.+.|++ +...++..|++++.++.+++ +.+|
T Consensus 83 ---~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d 153 (406)
T PRK09295 83 ---RSAEELVFVRGTTEGINLVANSWGNSNVRAGD----NIIISEMEHHANIVPWQMLCARVGAELRVIPLNPD--GTLQ 153 (406)
T ss_pred ---CCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcC----EEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC--CCCC
Confidence 15679999999999999999874 46677 99999987764 45566778999999998754 4689
Q ss_pred HHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhC
Q psy13922 143 ISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMG 222 (509)
Q Consensus 143 ~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~ 222 (509)
++.|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.... ...+...
T Consensus 154 ~~~l~~~i~~-----~t~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~~~----- 215 (406)
T PRK09295 154 LETLPALFDE-----RTRLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHH-----PVDVQAL----- 215 (406)
T ss_pred HHHHHHhcCC-----CcEEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCcc-----ccCchhc-----
Confidence 9999999876 7999999999999999998 78899999999999999999976322 1222211
Q ss_pred CCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHh
Q psy13922 223 EPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAV 302 (509)
Q Consensus 223 ~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (509)
+. .+++.|++|.+ |++| +||++ .++++++.+............. ....+..|. .....
T Consensus 216 ----~~-D~~~~s~~K~~-gp~G--~G~l~---~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~-----~~~~r 273 (406)
T PRK09295 216 ----DC-DFYVFSGHKLY-GPTG--IGILY---VKEALLQEMPPWEGGGSMIATV------SLTEGTTWA-----KAPWR 273 (406)
T ss_pred ----CC-CEEEeehhhcc-CCCC--cEEEE---EchHhHhhCCCcccCCceeeee------ecCCccccC-----Cchhh
Confidence 12 24456889988 7776 68887 5777776653221111000000 000000010 01123
Q ss_pred hhcccCcccccchhhcccCCCCCCCCchHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC--ceeEEeecCCCC
Q psy13922 303 LDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR-EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ--GAMYAFPQMKLP 379 (509)
Q Consensus 303 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~g~~~~~~~~~~ 379 (509)
++.|+.+..+..++..+++ + ..+ .++.++++.+++++++.+.|.+++++++..+. .+++.+ .++
T Consensus 274 ~e~GT~~~~~~~~l~~al~--------~--~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~-~~~-- 340 (406)
T PRK09295 274 FEAGTPNTGGIIGLGAALD--------Y--VSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAF-NLG-- 340 (406)
T ss_pred cCCCCccHHHHHHHHHHHH--------H--HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEE-EEC--
Confidence 4555566556666666643 1 111 25677788888999999999998888876542 455544 232
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhc
Q psy13922 380 AKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLER 459 (509)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (509)
+. +.++ +...|+++||.++.|..|... .+. .
T Consensus 341 ----------~~-~~~~-~~~~L~~~gI~v~~g~~c~~~-------------------------------~~~------~ 371 (406)
T PRK09295 341 ----------KH-HAYD-VGSFLDNYGIAVRTGHHCAMP-------------------------------LMA------Y 371 (406)
T ss_pred ----------Cc-CHHH-HHHHHHhCCeEEeccccchHH-------------------------------HHH------H
Confidence 11 2233 356778999999998866541 110 0
Q ss_pred ccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHHH
Q psy13922 460 TGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~ 502 (509)
.| .++ ++|+|+. ++++||+..++.|+++..
T Consensus 372 ~~---~~~----------~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 372 YN---VPA----------MCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HC---CCC----------EEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 00 012 8999998 899999999999988753
No 134
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=1.1e-24 Score=226.19 Aligned_cols=219 Identities=12% Similarity=0.092 Sum_probs=150.4
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh----cCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI----EDVDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~----~~gd~ 102 (509)
+|.+.+++.+++.+..... ..|. .+...++++.+.+.. ..++|++++|+++|+..+++.++ .+|+.
T Consensus 49 ~p~v~~a~~~~~~~~~~~~-~~~~-----~~~~~~la~~l~~~~----~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~ 118 (389)
T PRK01278 49 HPHLVEALKEQAEKLWHVS-NLYR-----IPEQERLAERLVENS----FADKVFFTNSGAEAVECAIKTARRYHYGKGHP 118 (389)
T ss_pred CHHHHHHHHHHHHhcCccc-cccC-----ChHHHHHHHHHHhhC----CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 6899999999988621111 1121 233444555554332 24689999999999999998874 35554
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCEEEEEec-CC-CCCCC----CCHHHHHHHHHhhhccCCceEEEEeCCCCCCC-CCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNMEQIGYYL-DE-SKQWG----LPISELERSITEARKHCNPRAIVIINPGNPTG-QVL 175 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~-~~~~~----~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG-~~~ 175 (509)
.++.|++.++.|+++...+...+........ .+ ..++. .|++.+++.+++ ++++|+++.++||+| ..+
T Consensus 119 ~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~avivep~~~~~G~~~~ 193 (389)
T PRK01278 119 ERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP-----NTAAILIEPIQGEGGIRPA 193 (389)
T ss_pred CCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC-----CeEEEEEecccCCCCCcCC
Confidence 5668999999999988776655443222111 00 01111 589999998876 799999998899999 789
Q ss_pred CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeec
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN 255 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~ 255 (509)
|++++++|.++|++||+++|+||+|.+|.+.+. ..+.... ++.+ + +.|+||.+ | +|+|+||++
T Consensus 194 ~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~~~--~~~p-----d---i~t~sK~l-~-~G~~ig~~~--- 256 (389)
T PRK01278 194 PDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK--LFAHEWA--GVTP-----D---IMAVAKGI-G-GGFPLGACL--- 256 (389)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--ceeeccc--CCCC-----C---EEEEehhc-c-CCcceEEEE---
Confidence 999999999999999999999999998866542 1111111 1111 1 34889999 5 899999998
Q ss_pred CCHHHHHHHHHhhh-cccCcchh
Q psy13922 256 LDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 256 ~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
+++++++.+..... .+.+.+.+
T Consensus 257 ~~~~~~~~~~~~~~~~t~~~~~~ 279 (389)
T PRK01278 257 ATEEAAKGMTPGTHGSTYGGNPL 279 (389)
T ss_pred EcHHHHhccCCCCCCCCCCccHH
Confidence 78888887765433 23345555
No 135
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=5.6e-24 Score=222.30 Aligned_cols=327 Identities=15% Similarity=0.155 Sum_probs=217.4
Q ss_pred CHHHHHHHHHHHhcccCCC---cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQS---VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~---~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd 101 (509)
++.+++++.+++.....+. ...|+......+|++.+++++ | .++.|++++|+ +++..++..+.. +++
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g---~~~~i~~~sG~-~a~~~~i~~l~~~~~g~ 133 (410)
T PRK13392 62 HPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----G---KESALLFTSGY-VSNDAALSTLGKLLPGC 133 (410)
T ss_pred CHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----C---CCCEEEECcHH-HHHHHHHHHHhcCCCCC
Confidence 6789999999888743211 121333334567888888887 3 24567777765 677777776654 666
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.|+++.+.|..+...++..|.++..++.+ |.+.+++.++.... .++++|++++|+||||.+++ ++
T Consensus 134 ----~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~-~~t~~v~i~~~~n~tG~~~~---l~ 198 (410)
T PRK13392 134 ----VILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASVDP-DRPKLIAFESVYSMDGDIAP---IE 198 (410)
T ss_pred ----EEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhccC-CCCEEEEEeCCCCCCccccc---HH
Confidence 88887778888888888889988776432 55667666653211 26889999999999999988 88
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|.++|+++|+++|+||+|....++.. ...+... .+... .. .++++|+||.| |++| ||++ ++++++
T Consensus 199 ~i~~l~~~~~~~livDea~~~g~~g~~--g~g~~~~-~~~~~---~~-div~~tlsK~~-g~~G---G~~~---~~~~~~ 264 (410)
T PRK13392 199 AICDLADRYNALTYVDEVHAVGLYGAR--GGGIAER-DGLMD---RI-DMIQGTLAKAF-GCLG---GYIA---ASADLI 264 (410)
T ss_pred HHHHHHHHcCCEEEEECCccccCcCCC--CCchhhh-ccCCC---CC-cEEEEEChHhh-hccc---chhh---cCHHHH
Confidence 899999999999999999995444321 1222111 11110 11 26688999999 7777 8987 789999
Q ss_pred HHHHHhhhcc---cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 262 AMLHKSISAM---LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 262 ~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+.+++....+ ...+.. .++++..+++ ..++..
T Consensus 265 ~~l~~~~~~~~~s~~~~~~----------------------------------~~~a~~aaL~-----------~~~~~~ 299 (410)
T PRK13392 265 DFVRSFAPGFIFTTALPPA----------------------------------VAAGATAAIR-----------HLKTSQ 299 (410)
T ss_pred HHHHHhCcchhccCcCCHH----------------------------------HHHHHHHHHH-----------HHhcCH
Confidence 9888765432 122222 2222222222 111123
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
..++.+.++++++.+.|+++ |+.+.+++++++.. .+..+. ...++...+++++||.+.++.....+
T Consensus 300 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~i-~~~~~~------------~~~~~~~~L~~~~GI~v~~~~~p~~~ 365 (410)
T PRK13392 300 TERDAHQDRVAALKAKLNAN-GIPVMPSPSHIVPV-MVGDPT------------LCKAISDRLMSEHGIYIQPINYPTVP 365 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEEEE-EeCCHH------------HHHHHHHHHHHhCCEEEeeeCCCCCC
Confidence 45577888899999999988 88887788777532 232111 12344556667889999986543331
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEK 496 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~ 496 (509)
.+.. ++|+++. +++++++.+++.
T Consensus 366 -----------------------------------------------~~~~--------~lRis~~~~~t~edid~l~~a 390 (410)
T PRK13392 366 -----------------------------------------------RGTE--------RLRITPTPLHDDEDIDALVAA 390 (410)
T ss_pred -----------------------------------------------CCCc--------eEEEEECCCCCHHHHHHHHHH
Confidence 1222 8999985 899999999999
Q ss_pred HHHHHHHH
Q psy13922 497 FREFHEEF 504 (509)
Q Consensus 497 l~~~~~~~ 504 (509)
|.++.+++
T Consensus 391 L~~~~~~~ 398 (410)
T PRK13392 391 LVAIWDRL 398 (410)
T ss_pred HHHHHHHc
Confidence 99887653
No 136
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=2.9e-24 Score=222.38 Aligned_cols=354 Identities=13% Similarity=0.110 Sum_probs=229.5
Q ss_pred CCCCCHHHHHHHHHHHhcc--cCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh---
Q psy13922 23 DPRFPDDVKQRAQAVLDGC--RGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI--- 97 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~--~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--- 97 (509)
....|+.|++++.+.+... ++...+.|+ ..+...+++++++++.. .+. .++++|++|+|++++++.+++++.
T Consensus 8 ~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~ 84 (382)
T TIGR03403 8 TTMLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDE 84 (382)
T ss_pred CCCCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhh
Confidence 4456789999999988763 233333354 34567899998888752 232 267899999999999999999863
Q ss_pred --cCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 98 --EDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 98 --~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
+++ ++.|+++.+.|+.+... ++..|++++.++.+++ +.+|++.+++.+++ +++++++++|+||||
T Consensus 85 ~~~~~---~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~--g~~d~~~l~~~i~~-----~t~lv~~~~~~n~tG 154 (382)
T TIGR03403 85 ILKGG---KNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ--GTITAEQVREAITE-----KTALVSVMWANNETG 154 (382)
T ss_pred cccCC---CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC--CCCCHHHHHHhccc-----CCeEEEEEcccCCCc
Confidence 332 23799998777665544 5567999999998754 47899999999876 789999999999999
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
..++ +++|.++|+++|+++++|+++..... ...+.. . +.+++ +.|++|.+ |++|+ |++.
T Consensus 155 ~~~~---~~~I~~la~~~g~~~ivD~a~~~g~~-----~~~~~~----~-----~~D~~-~~s~~K~~-gp~G~--g~l~ 213 (382)
T TIGR03403 155 MIFP---IKEIGEICKERGVLFHTDAVQAIGKI-----PVDVQK----A-----GVDFL-SFSAHKFH-GPKGV--GGLY 213 (382)
T ss_pred cccC---HHHHHHHHHHcCCEEEEechhhcCCC-----ccCccc----c-----CCCEE-EEcchhhC-CCCce--EEEE
Confidence 9998 67888999999999999999864211 111111 1 23344 55889988 78885 6554
Q ss_pred eecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 253 VINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
+ .+. + .+... ..+.... .. ...++.+..++.++..++. .
T Consensus 214 v--r~~-~--~~~p~---~~g~~~~-----------~~------------~~~gt~~~~~~~al~~al~----------~ 252 (382)
T TIGR03403 214 I--RKG-V--ELTPL---FHGGEHM-----------GG------------RRSGTLNVPYIVAMGEAMR----------L 252 (382)
T ss_pred E--CCC-C--CCCCc---ccCCCCC-----------CC------------cccCCcChHHHHHHHHHHH----------H
Confidence 2 222 1 01000 0000000 00 0011122224444444432 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCc---eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQG---AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI 409 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 409 (509)
..+.++..+++++++++++.+.|.+++++.++.+.. +.++.+.++ ++. ... +...|.++||.+
T Consensus 253 ~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-~~~-~~~~L~~~gI~v 318 (382)
T TIGR03403 253 ANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK------------GVE-GEA-MLWDLNKAGIAA 318 (382)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC------------CCC-HHH-HHHhhccCCEEE
Confidence 222366777889999999999999988888876531 223333343 222 233 334477889999
Q ss_pred ecCCCCCCC-CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cC
Q psy13922 410 VPGAGFGQV-PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQ 486 (509)
Q Consensus 410 ~pg~~f~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~ 486 (509)
+.|..|... ....++|++++...+ ...+ .+|+|+. ++
T Consensus 319 ~~g~~c~~~~~~~~~v~~~~g~~~~--------------------------------~~~~--------~iR~s~~~~~t 358 (382)
T TIGR03403 319 STGSACASEDLEANPVMVAIGADKE--------------------------------LAHT--------AIRLSLSRFTT 358 (382)
T ss_pred EchhccCCCCCCcCHHHHHcCCChH--------------------------------HhCe--------eEEEECCCCCC
Confidence 998877542 122444444331100 0112 7999999 89
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy13922 487 PEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 487 ~~~i~~~~~~l~~~~~~~~ 505 (509)
.+||+.+++.|++++++++
T Consensus 359 ~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 359 EEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987754
No 137
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.94 E-value=1.7e-24 Score=215.59 Aligned_cols=351 Identities=17% Similarity=0.180 Sum_probs=251.3
Q ss_pred CCCCHHHHHHHHHHHhcc--cCCCcccCCC--CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh--h
Q psy13922 24 PRFPDDVKQRAQAVLDGC--RGQSVGSYTD--SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL--I 97 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~--~~~~~~~Y~~--~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l--~ 97 (509)
..+-+.+++++...+... ++.+.+.|+. .....+.|+.||+.++ +++++|+||+|+||+.+++++.. .
T Consensus 11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llg------a~~~eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLG------ADPEEIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhC------CCCCeEEEecCCcHHHHHHHHhhHHh
Confidence 345678999999998885 3444455543 2356778889999883 67799999999999999999983 3
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhc---CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEF---NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
....+++++|+++.-.|+...+.++.+ |+++..+|.+.++ .+|+++|++++++ ++.+|.+...||.+|++
T Consensus 85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G--~v~~e~L~~al~~-----~T~LVSim~aNnE~G~I 157 (386)
T COG1104 85 YRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNG--LVDLEQLEEALRP-----DTILVSIMHANNETGTI 157 (386)
T ss_pred hhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCC--eEcHHHHHHhcCC-----CceEEEEEecccCeeec
Confidence 322224569999999999988877766 9999999998764 8899999999998 79999999999999999
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
.| +++|.++|+++++++++|.++...- -...+..+ ..+.+++ |-+|.. |+.|+ |.+.+
T Consensus 158 Qp---I~ei~~i~k~~~i~fHvDAvQa~Gk-----ipi~~~~~---------~vD~ls~-SaHK~~-GpkGi--GaLyv- 215 (386)
T COG1104 158 QP---IAEIGEICKERGILFHVDAVQAVGK-----IPIDLEEL---------GVDLLSF-SAHKFG-GPKGI--GALYV- 215 (386)
T ss_pred cc---HHHHHHHHHHcCCeEEEehhhhcCc-----eecccccc---------CcceEEe-ehhhcc-CCCce--EEEEE-
Confidence 88 9999999999999999999997621 22233222 1236666 669999 88884 55542
Q ss_pred cCCHHHHHHHHHhhh----cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 255 NLDPGVKAMLHKSIS----AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 255 ~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
...-.+...+.-..+ ..+..+.+ +..++..++
T Consensus 216 ~~~~~~~p~i~GGgQE~g~RsGTenv~----------------------------------~Ivg~~~A~---------- 251 (386)
T COG1104 216 RPGVRLEPLIHGGGQERGLRSGTENVP----------------------------------GIVGFGKAA---------- 251 (386)
T ss_pred CCCCccCceeccCcCCCCCCCCCccHH----------------------------------HHHHHHHHH----------
Confidence 111222222211111 11222332 344444442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCeeccC---CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 331 EQFSREKQSVLDSLKQRAKMVADTFNSI-EGMSCNPV---QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
....++++....++..+++.+.+.|.+. |++.+... .-...+.+-|+ |+..+. +...|+.+|
T Consensus 252 ~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~------------gv~gE~--ll~~L~~~g 317 (386)
T COG1104 252 EIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP------------GVEGES--LLLALDLAG 317 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC------------CCcHHH--HHHhccccC
Confidence 2334447788888999999999999975 77665432 12223332233 332233 457788999
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-- 484 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-- 484 (509)
|++-.|+.|... .+.+..+|.++|+......+ .+|+||+
T Consensus 318 I~vStGSACsS~-------------------------------~~~pShVL~AmG~~~e~a~~--------siR~S~g~~ 358 (386)
T COG1104 318 IAVSTGSACSSG-------------------------------SLEPSHVLRAMGISEELAHG--------SIRFSLGRF 358 (386)
T ss_pred eEEeccccccCC-------------------------------CCCccHHHHHcCCChHHhCc--------cEEEEcCCC
Confidence 999999988762 34567889999987766666 8999999
Q ss_pred cChHHHHHHHHHHHHHHHHHHh
Q psy13922 485 PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
+++++++.+++.|++++++.+.
T Consensus 359 tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 359 TTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred CCHHHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999988765
No 138
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.94 E-value=4.6e-24 Score=217.00 Aligned_cols=264 Identities=14% Similarity=0.072 Sum_probs=182.0
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+++++.+.+.. . . .|++.....++++.+++++ | ++++++++|+++++..++++++++||
T Consensus 10 ~~~~v~~a~~~~~~~---~-~-~~~~~~~~~~l~~~~a~~~----g----~~~~~~~~~gt~a~~~~~~~l~~~gd---- 72 (338)
T cd06502 10 PTPEMLEAMAAANVG---D-D-VYGEDPTTAKLEARAAELF----G----KEAALFVPSGTAANQLALAAHTQPGG---- 72 (338)
T ss_pred CCHHHHHHHHhcccC---C-c-ccCCCHHHHHHHHHHHHHh----C----CCeEEEecCchHHHHHHHHHhcCCCC----
Confidence 467888888776543 1 2 4766667788888888887 3 45788888888999999999999888
Q ss_pred eEEEcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc--cCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 106 GVLIPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSITEARK--HCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~--~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
.|+++.|+|..+.. .....|++++.++.+. +.+|++.|++++++..+ ..++++|++++|+|| |..++.+++
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l 148 (338)
T cd06502 73 SVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDEL 148 (338)
T ss_pred eEEEecCcceeeecCCcHHHHcCceEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHH
Confidence 99999999876442 3445799999998753 47899999999874211 025889999999998 667799999
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGV 260 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~ 260 (509)
++|+++|+++|+++|+|++|..+..... ..++..... ..+++ +.|+||.+ |++| |++++ .++++
T Consensus 149 ~~i~~~~~~~~~~livDea~~~~~~~~~--~~~~~~~~~-------~~d~~-~~s~sK~~-~~~~---g~~~~--~~~~~ 212 (338)
T cd06502 149 KAISALAKENGLPLHLDGARLANAAAAL--GVALKTYKS-------GVDSV-SFCLSKGG-GAPV---GAVVV--GNRDF 212 (338)
T ss_pred HHHHHHHHHcCCeEeechHHHHHHHHhc--CCCHHHHHh-------cCCEE-EEeccccC-CCcc---ceEEE--CCHHH
Confidence 9999999999999999999865432111 113322211 12354 66999999 6776 44432 78999
Q ss_pred HHHHHHhhhccc---CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 261 KAMLHKSISAML---CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 261 ~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++.+......+. ..+.+ .+.+....++. .. .
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~L~~--------~~----~ 246 (338)
T cd06502 213 IARARRRRKQAGGGMRQSGF----------------------------------LAAAGLAALEN--------DL----W 246 (338)
T ss_pred HHHHHHHHHHhCCChhhHHH----------------------------------HHHHHHHHhcC--------ch----H
Confidence 999877653221 12222 22222222220 01 2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEe
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAF 373 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~ 373 (509)
.+..+.+.++++++.+.|+++ ++.+.++.++++++
T Consensus 247 ~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~v 281 (338)
T cd06502 247 LRRLRHDHEMARRLAEALEEL-GGLESEVQTNIVLL 281 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCcccccCCeEEE
Confidence 234456667778899999888 56666777777654
No 139
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=5.3e-24 Score=221.55 Aligned_cols=330 Identities=15% Similarity=0.130 Sum_probs=206.7
Q ss_pred HHHHHHhhcCC--CCCC---CCCCCHHHHHHHHHHHhcccCCCcccCCCCcch----HHHHHHHHHHHhhhcCCCCCCCc
Q psy13922 8 SLQVLALVSLP--QLFD---DPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGI----EIIRRHVAQYISRRDGQPADWQD 78 (509)
Q Consensus 8 ~~~~~~~~~~~--~~~~---~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~----~~lr~~va~~l~~~~g~~~~~~~ 78 (509)
+|..+...+.. .+++ ....|+.+++++.+.+..........|....+. .++|+.+++++ | .++++
T Consensus 6 ~r~~f~~~~~~~~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~----~--~~~~~ 79 (397)
T TIGR01976 6 VRGQFPALADGDRVFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL----N--ADPPE 79 (397)
T ss_pred HHhhCCcCCCCCeEEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc----C--CCCCe
Confidence 45445443322 3443 333578999999998876322222336554443 46666677666 4 34557
Q ss_pred EEEeCCHHHHHHHHHHHh---hcCCCCCCCeEEEcCCCChhHH----HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 79 VILSAGASDGIKSVLKLL---IEDVDGKKPGVLIPIPQYPLYS----ASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l---~~~gd~~~~~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
|++++|+++++..++.++ .++|| +|+++.|.|.+.. ..++..|++++.++.+++ ++.+|++.+++.++
T Consensus 80 v~~~~~~t~~l~~~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~ 154 (397)
T TIGR01976 80 VVFGANATSLTFLLSRAISRRWGPGD----EVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLS 154 (397)
T ss_pred EEEeCCHHHHHHHHHHHHHhcCCCCC----EEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcC
Confidence 999999999999888776 46777 9999999887643 456778999999988753 35789999999997
Q ss_pred hhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeE
Q psy13922 152 EARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELA 231 (509)
Q Consensus 152 ~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 231 (509)
+ ++++|++++|+||||..++ +++|.++|+++|+++|+|+++... . ....+... +.+++
T Consensus 155 ~-----~~~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~----~-~~~~~~~~---------~~d~~ 212 (397)
T TIGR01976 155 P-----RTRLVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYAP----H-GLIDVQAT---------GADFL 212 (397)
T ss_pred C-----CceEEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhcc----c-cCCCHHHc---------CCCEE
Confidence 6 7999999999999999987 889999999999999999997531 1 11222221 12255
Q ss_pred EEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCccc
Q psy13922 232 SFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSV 311 (509)
Q Consensus 232 ~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (509)
+.|++|.+ | + |+|+++ .++++++.+......+. .+.. +. .++.|++...
T Consensus 213 -~~s~~K~~-g-~--~~G~l~---~~~~~~~~l~~~~~~~~-~~~~-----~~-----------------~~~~gt~~~~ 261 (397)
T TIGR01976 213 -TCSAYKFF-G-P--HMGILW---GRPELLMNLPPYKLTFS-YDTG-----PE-----------------RFELGTPQYE 261 (397)
T ss_pred -EEechhhc-C-C--ceEEEE---EcHHHHhhCCCccccCc-cCCC-----cc-----------------hhcCCCCCHH
Confidence 46999988 5 3 589987 68888877654332111 0000 00 0112222211
Q ss_pred ccchhhcccC----CCCCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC-----CceeEEeecCCCCHH
Q psy13922 312 GQTVMDCVVN----PPQPGEP-SYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPV-----QGAMYAFPQMKLPAK 381 (509)
Q Consensus 312 ~~~al~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-----~~g~~~~~~~~~~~~ 381 (509)
...++..+++ ......+ ...+.....++.+++..++.+++.+.|+++++++++.+ .++++. +.+.
T Consensus 262 ~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~---- 336 (397)
T TIGR01976 262 LLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVS-FTVH---- 336 (397)
T ss_pred HHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEE-EEeC----
Confidence 2222221111 0000000 00111112566778888889999999998867887654 455443 3332
Q ss_pred HHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 382 AIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 382 ~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
+. +..+ +.+.|+++||.+..|..|.
T Consensus 337 --------~~-~~~~-l~~~L~~~gI~v~~~~~~~ 361 (397)
T TIGR01976 337 --------GL-PPQR-VVRRLADQGIDAWAGHFYA 361 (397)
T ss_pred --------Cc-CHHH-HHHHHHHCCeEEEeCccch
Confidence 21 1233 4556677899999887665
No 140
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.93 E-value=1.2e-23 Score=217.76 Aligned_cols=325 Identities=13% Similarity=0.084 Sum_probs=210.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
|+.+++++.+++...... ...|....|...+++.+++.+.+.++ .++.|++++ +++++..+++.++++|| .
T Consensus 55 ~~~v~~a~~~~~~~~~~~-~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~~-g~~~~~~~l~~~~~~gd----~ 125 (385)
T PRK05958 55 HPRLIAAAQQAARRYGAG-SGGSRLVTGNSPAHEALEEELAEWFG---AERALLFSS-GYAANLAVLTALAGKGD----L 125 (385)
T ss_pred CHHHHHHHHHHHHhcCCC-CCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEECc-HHHHHHHHHHHhCCCCC----E
Confidence 578999999998763211 11133333333344444444444434 234455555 55666677788888888 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+++.|+|..+...++..|.+++.++. .|++.+++.++... .++.++++++++||+|...+ +++|+++
T Consensus 126 V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~--~~~~lvi~~~~~~~~G~~~~---l~~i~~i 193 (385)
T PRK05958 126 IVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWR--AGRALIVTESVFSMDGDLAP---LAELVAL 193 (385)
T ss_pred EEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhcc--CCCeEEEEEecccCCCCcCC---HHHHHHH
Confidence 999999999999998889999888763 37899999887520 12556666789999998866 8999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
|+++|+++|+||+|..+.++.. ....... ..+. ...++|++.|+||.+ |++| ||++ .++++++.+.+
T Consensus 194 a~~~~~~li~De~~~~g~~~~~--g~~~~~~-~~~~---~~~~~i~~~s~sK~~-~~~G---g~~~---~~~~~~~~~~~ 260 (385)
T PRK05958 194 ARRHGAWLLVDEAHGTGVLGPQ--GRGLAAE-AGLA---GEPDVILVGTLGKAL-GSSG---AAVL---GSETLIDYLIN 260 (385)
T ss_pred HHHhCCEEEEECcccccccCCC--CCchHHh-hCCC---CCCceEEEEechhhc-ccCC---cEEE---cCHHHHHHHHH
Confidence 9999999999999977554321 1111111 1111 123488899999999 6666 8887 78888888764
Q ss_pred hhhcc---cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHH
Q psy13922 267 SISAM---LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDS 343 (509)
Q Consensus 267 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (509)
....+ ...+.. ..+++..+++ .. +..+.+++.
T Consensus 261 ~~~~~~~~~~~~~~----------------------------------~~aa~~aal~----------~~-~~~~~~~~~ 295 (385)
T PRK05958 261 RARPFIFTTALPPA----------------------------------QAAAARAALR----------IL-RREPERRER 295 (385)
T ss_pred hCccceecCCCCHH----------------------------------HHHHHHHHHH----------HH-hcCHHHHHH
Confidence 33211 112222 2222222211 01 111456778
Q ss_pred HHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccc
Q psy13922 344 LKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYH 423 (509)
Q Consensus 344 ~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~ 423 (509)
+.++++++.+.|+++ ++++.++.+++ +|+.++ .. .++.++... |.++||.+.++..+...
T Consensus 296 ~~~~~~~l~~~L~~~-~~~~~~~~~~~-~~~~~~--~~----------~~~~~~~~~-l~~~gI~v~~~~~~~~~----- 355 (385)
T PRK05958 296 LAALIARLRAGLRAL-GFQLMDSQSAI-QPLIVG--DN----------ERALALAAA-LQEQGFWVGAIRPPTVP----- 355 (385)
T ss_pred HHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEEeC--CH----------HHHHHHHHH-HHHCCceEecccCCCCC-----
Confidence 888999999999987 77777676665 454443 10 023344444 45679999985533220
Q ss_pred cccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHH
Q psy13922 424 FRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREF 500 (509)
Q Consensus 424 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~ 500 (509)
.+.. ++|+++. ++++++++++++|+++
T Consensus 356 ------------------------------------------~~~~--------~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 356 ------------------------------------------AGTS--------RLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred ------------------------------------------CCCc--------eEEEEecCCCCHHHHHHHHHHHHhc
Confidence 1222 8999998 7999999999999875
No 141
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.93 E-value=4.5e-24 Score=222.49 Aligned_cols=302 Identities=13% Similarity=0.059 Sum_probs=204.6
Q ss_pred CCCCCCHHHHHHHHHHHhc-c--cCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRFPDDVKQRAQAVLDG-C--RGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~-~--~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
++..+++.|++++...+.. . ...+...|+...+...+++.+++++.+.+|.+ ...|++++ +++++..++.++.+
T Consensus 27 ~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~s-gt~a~~~~l~~l~~ 103 (402)
T cd00378 27 SENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPHS-GSQANLAVYFALLE 103 (402)
T ss_pred cCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecCC-cHHHHHHHHHHhcC
Confidence 5556789999998776532 1 11122336677777888887777776666743 34566565 56899999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHH-----HHhcCCEEEEEecCCC-CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSAS-----LAEFNMEQIGYYLDES-KQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~-----~~~~g~~~~~v~~~~~-~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
+|| +|+++.|+|.++... ++..|.++..++.+.+ .++.+|++.+++.+... ++++|++++|+||+
T Consensus 104 ~Gd----~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~----~~~~v~~~~~~~~~- 174 (402)
T cd00378 104 PGD----TIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEF----KPKLIVAGASAYPR- 174 (402)
T ss_pred CCC----EEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhC----CCCEEEecCcccCC-
Confidence 998 999999999876443 5667887777776543 25789999999999653 78999998888874
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccC-CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVY-QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
.. ++++|+++|+++|+++|+|++| .++.+.+. ...++. ..+ +++.|+||.+ +|.|+||+
T Consensus 175 -~~---~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~-~~~~~~-----------~~d-v~~~s~sK~l---~G~~gg~i 234 (402)
T cd00378 175 -PI---DFKRFREIADEVGAYLLVDMAHVAGLVAGGV-FPNPLP-----------GAD-VVTTTTHKTL---RGPRGGLI 234 (402)
T ss_pred -Cc---CHHHHHHHHHhcCCEEEEEccchhhhhhccc-CCCccc-----------CCc-EEEeccccCC---CCCCceEE
Confidence 32 3889999999999999999996 44433321 111111 112 4577999976 68899999
Q ss_pred eeecCCHHHHHHHHHhhhcc-cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 252 EVINLDPGVKAMLHKSISAM-LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
+. .++++++.+.+..... .+.+... ...++..++
T Consensus 235 ~~--~~~~~~~~l~~~~~~~~~~~~~~~---------------------------------~~~a~~~al---------- 269 (402)
T cd00378 235 LT--RKGELAKKINSAVFPGLQGGPHLH---------------------------------VIAAKAVAL---------- 269 (402)
T ss_pred Ee--ccHHHHHHHHHHhCccccCCchHH---------------------------------HHHHHHHHH----------
Confidence 83 4448998887654321 1111110 111111111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeec-cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeE
Q psy13922 331 EQFSR-EKQSVLDSLKQRAKMVADTFNSIEGMSCN-PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGIC 408 (509)
Q Consensus 331 ~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~ 408 (509)
..... +.++.++.+.++++++.+.|.+. |+.+. .+.+++++|++++.. +. +...+.++|+++||.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~----------~~--~~~~~~~~l~~~gI~ 336 (402)
T cd00378 270 KEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDLRPK----------GI--TGKAAEDALEEAGIT 336 (402)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeCCcc----------CC--CHHHHHHHHHHcCcE
Confidence 11111 35667788899999999999988 88876 467889999877511 11 222356778899999
Q ss_pred EecCC
Q psy13922 409 IVPGA 413 (509)
Q Consensus 409 v~pg~ 413 (509)
+.++.
T Consensus 337 v~~~~ 341 (402)
T cd00378 337 VNKNT 341 (402)
T ss_pred EcCCc
Confidence 98744
No 142
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.93 E-value=4.2e-24 Score=220.86 Aligned_cols=218 Identities=13% Similarity=0.136 Sum_probs=146.4
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh---c-CCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI---E-DVDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~-~gd~ 102 (509)
++.+.+++.+++..... ....|+. .-..++.+.+++++ | .+++++++|+++++..+++.+. . .+ +
T Consensus 45 ~p~v~~a~~~~~~~~~~-~~~~~~~-~~~~~l~~~la~~~----g----~~~~~~~~sg~~a~~~a~~~~~~~~~~~~-~ 113 (379)
T TIGR00707 45 HPKLVEALKEQLEKLVH-VSNLYYT-EPQEELAEKLVEHS----G----ADRVFFCNSGAEANEAALKLARKYTGDKG-K 113 (379)
T ss_pred CHHHHHHHHHHHhhccc-cccccCC-HHHHHHHHHHHhhC----C----CCEEEEeCCcHHHHHHHHHHHHHHhhccC-C
Confidence 58999999998887321 1122432 22244555555444 4 2499999999999999998763 2 10 0
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCEEEE----EecCCCCCCC--CCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC-CC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNMEQIG----YYLDESKQWG--LPISELERSITEARKHCNPRAIVIINPGNPTGQ-VL 175 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~~--~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~-~~ 175 (509)
++++|+++.|+|+++...+...+..... .+...+..+. .|++.+++.+.+ ++++|+++.++||+|. .+
T Consensus 114 ~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~v~~~p~~~~~g~~~~ 188 (379)
T TIGR00707 114 EKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD-----ETAAVIVEPIQGEGGVNPA 188 (379)
T ss_pred CCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh-----CeeEEEEEccccCCCCccC
Confidence 1239999999999887776655543321 2222221111 189999998876 6899999777788886 47
Q ss_pred CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeec
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN 255 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~ 255 (509)
+.+++++|.++|+++|+++|+||+|.+|.+.+ .+.++... ... .+++ +|||.+ | +|+|+||++
T Consensus 189 ~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g--~~~~~~~~--~~~-----~d~~---t~sK~~-~-~G~riG~~~--- 251 (379)
T TIGR00707 189 SAEFLKALREICKDKDALLIFDEVQTGIGRTG--KFFAYEHY--GIE-----PDII---TLAKGL-G-GGVPIGATL--- 251 (379)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCccc--hhhhHHhc--CCC-----CCEE---EEcccc-c-CCcccEEEE---
Confidence 99999999999999999999999999876543 12121111 111 1233 689999 6 999999998
Q ss_pred CCHHHHHHHHHhhh-cccCcchh
Q psy13922 256 LDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 256 ~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
+++++++.+..... ...+.+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~ 274 (379)
T TIGR00707 252 AKEEVAEAFTPGDHGSTFGGNPL 274 (379)
T ss_pred EcHHHHhhhcCCCCCCCCCCCHH
Confidence 78899988875422 22334555
No 143
>PRK07049 methionine gamma-lyase; Validated
Probab=99.93 E-value=6.2e-23 Score=214.24 Aligned_cols=231 Identities=16% Similarity=0.175 Sum_probs=172.2
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---- 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---- 121 (509)
+++|+.+.. ..|++.+|++.+ .+++++++|+++++..++.+++++|| +|+++.|+|..+...+
T Consensus 77 y~R~~~Pt~-~~Le~~lA~leg--------~~~~iv~~sG~~Ai~~~l~al~~~Gd----~Vv~~~p~Y~~~~~~~~~~l 143 (427)
T PRK07049 77 YSRFNHPNS-EIVEDRLAVYEG--------AESAALFSSGMSAIATTLLAFVRPGD----VILHSQPLYGGTETLLAKTF 143 (427)
T ss_pred ccCCCCcCH-HHHHHHHHHHhC--------CCcEEEEccHHHHHHHHHHHHhCCCC----EEEEcCCCcccHHHHHHHHH
Confidence 566776543 789999999883 45788899999999999999999999 9999999999987664
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH---CCcEEEEcc
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR---EKLFLFADE 198 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~---~~i~lI~De 198 (509)
...|++++.++. ..|.+.+++.+.+.....++++|++++|+||||.+++.+++.+|++.|+. +++++|+|+
T Consensus 144 ~~~Gi~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDe 217 (427)
T PRK07049 144 RNFGVGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDN 217 (427)
T ss_pred HhcCcEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEEC
Confidence 567998887762 34678888777642211278999999999999999998888888888654 789999999
Q ss_pred cCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcc-cCcchh
Q psy13922 199 VYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAM-LCPTVL 277 (509)
Q Consensus 199 ay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~-~~~~~~ 277 (509)
+|..+... .++ . ....|+++|+||.++|.+|+|+||++ +++++++.+...+..+ .+.+.+
T Consensus 218 ty~~~~~~-----~pl-~----------~g~divv~S~SK~~gG~~glr~G~vv---~~~~l~~~l~~~~~~~g~~ls~~ 278 (427)
T PRK07049 218 TLLGPVFQ-----KPL-E----------HGADLSVYSLTKYVGGHSDLVAGAVL---GRKALIRQVRALRSAIGTQLDPH 278 (427)
T ss_pred CccccccC-----Ccc-c----------cCCCEEEEcCceeecCCCCcEEEEEE---CCHHHHHHHHHHHHhcCCCCCHH
Confidence 98764321 111 1 11257788999999558999999998 7899999998776633 234444
Q ss_pred hhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy13922 278 ALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS 357 (509)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 357 (509)
.+.++...++ .+....+...+++..+.+.|++
T Consensus 279 ----------------------------------~a~l~~r~L~--------------tl~~R~~~~~~~a~~la~~L~~ 310 (427)
T PRK07049 279 ----------------------------------SCWMLGRSLE--------------TLVLRMERANRNARAVAEFLRD 310 (427)
T ss_pred ----------------------------------HHHHHHcCCC--------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 2222222222 1344455568889999999999
Q ss_pred CCCCe
Q psy13922 358 IEGMS 362 (509)
Q Consensus 358 ~~g~~ 362 (509)
.|++.
T Consensus 311 ~p~V~ 315 (427)
T PRK07049 311 HPKVE 315 (427)
T ss_pred CCCcc
Confidence 87765
No 144
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=3.5e-23 Score=214.10 Aligned_cols=349 Identities=16% Similarity=0.185 Sum_probs=220.8
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCcccCC--C--CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVGSYT--D--SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~~Y~--~--~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
....|+.+++++.+.+....+.....+. + ..-..++|+.+++++ | .++++|++|+|++++++.++..+..
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~i~~t~~~t~a~~~al~~~~~ 81 (379)
T TIGR03402 8 TTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLL----G--AEPDEIIFTSGGTESDNTAIKSALA 81 (379)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 4456889999998888752111111011 0 112345666777766 4 4578999999999999999988752
Q ss_pred ---CCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 99 ---DVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 99 ---~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
+++ .|+++...|+.+... ++..|.+++.++.+++ +.+|++.+++.+++ +++++++++++||||
T Consensus 82 ~~~~~~----~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~--g~~~~~~l~~~i~~-----~~~lv~i~~~~n~tG 150 (379)
T TIGR03402 82 AQPEKR----HIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEE--GRLDLEELRAAITD-----DTALVSVMWANNETG 150 (379)
T ss_pred hcCCCC----eEEEcccccHHHHHHHHHHHHcCCEEEEEccCCC--CcCCHHHHHHhcCC-----CcEEEEEEcccCCee
Confidence 344 899988888776543 4456999999988654 46899999999976 799999999999999
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
..++ +++|.++|+++|+++++|++++... ....+.. . ..+++++ |.+|.+ |++| +|++.
T Consensus 151 ~~~~---~~~I~~l~~~~g~~vivD~~~~~g~-----~~~~~~~----~-----~~D~~~~-s~~K~~-gp~G--~g~l~ 209 (379)
T TIGR03402 151 TIFP---IEEIGEIAKERGALFHTDAVQAVGK-----IPIDLKE----M-----NIDMLSL-SGHKLH-GPKG--VGALY 209 (379)
T ss_pred eccc---HHHHHHHHHHcCCEEEEECcccccc-----cccCccc----C-----CCCEEEE-cHHHcC-CCCc--eEEEE
Confidence 9999 6789999999999999999997521 1112211 1 2224444 778977 7777 55554
Q ss_pred eecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 253 VINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
+ .+ +.. +..... +... . .....++.+..+..++..+++ .
T Consensus 210 v--~~-~~~--~~p~~~---g~~~------~-----------------~~~~~gt~~~~~~~~l~~al~----------~ 248 (379)
T TIGR03402 210 I--RK-GTR--FRPLLR---GGHQ------E-----------------RGRRAGTENVPGIVGLGKAAE----------L 248 (379)
T ss_pred E--CC-CCC--CCCccc---CCcc------C-----------------CCcCCCCccHHHHHHHHHHHH----------H
Confidence 2 22 211 111000 0000 0 000111112223444444432 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCCCeeccCC-----ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNS-IEGMSCNPVQ-----GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
..++++...++.+++++.+.+.|.+ ++++.+..+. +.+.+|+ + +. +..+ +...|+++|
T Consensus 249 ~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~------------~~-~~~~-~~~~l~~~g 312 (379)
T TIGR03402 249 ATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--E------------YI-EGEA-ILLLLDMEG 312 (379)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--c------------CC-CHHH-HHHhhccCC
Confidence 3345777788899999999999985 8888776432 2233343 2 11 1233 345678899
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-- 484 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-- 484 (509)
|.+.+|..|... .......++.+|.......+ .+|+|+.
T Consensus 313 I~v~~g~~c~~~-------------------------------~~~~~~~~~~lg~~~~~~~~--------~vR~S~~~~ 353 (379)
T TIGR03402 313 ICASSGSACTSG-------------------------------SLEPSHVLRAMGVPHTAAHG--------SIRFSLSRY 353 (379)
T ss_pred EEEEchhhcCCC-------------------------------CCCcCHHHHHcCCChhhcCc--------eEEEEcCCC
Confidence 999999887662 11111223333321111112 8999999
Q ss_pred cChHHHHHHHHHHHHHHHHHH
Q psy13922 485 PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~~~ 505 (509)
++.+||+.+++.|++++++++
T Consensus 354 ~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 354 NTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999988755
No 145
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.93 E-value=8.6e-23 Score=209.81 Aligned_cols=211 Identities=14% Similarity=0.138 Sum_probs=158.1
Q ss_pred CCCCHHHHHHHHHHHhcccCCCc-c-cCC--CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQSV-G-SYT--DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~~-~-~Y~--~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
-++.+.+++++.+.-....+... . ... ...-..++++.+++++ | + +++++|+|+++++..++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----G--M--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc----C--C--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 34567777777777643221111 1 011 1122467888888887 4 2 78999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc--CCceEEEEeCCCCCCCCCCCH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH--CNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~--~~~~~ivi~~p~NPtG~~~s~ 177 (509)
|| .|+++.++|.+....++..|++++.++.+.++.|.+|++.+++.+++..+. +++++|++++|+||||...+
T Consensus 83 gd----~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~- 157 (361)
T cd06452 83 GD----WVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD- 157 (361)
T ss_pred CC----EEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc-
Confidence 88 999999998888778899999999999886656789999999998742211 26899999999999998855
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++|+++|+++|+++|+|++|..... + .+...+ + ..++++|+||.+ | ++.|+||++ .+
T Consensus 158 --~~~i~~~~~~~~~~vivD~a~~~g~~----~-~~~~~~----~------~d~~~~s~~K~l-~-~~~~~G~l~---~~ 215 (361)
T cd06452 158 --AKKIAKVCHEYGVPLLLNGAYTVGRM----P-VSGKEL----G------ADFIVGSGHKSM-A-ASAPIGVLA---TT 215 (361)
T ss_pred --HHHHHHHHHHcCCeEEEECCcccCCc----C-CCHHHc----C------CCEEEecCCccc-c-CCCCeEEEE---EC
Confidence 88999999999999999999975221 1 222221 1 145677999999 5 556999998 68
Q ss_pred HHHHHHHHHhhh
Q psy13922 258 PGVKAMLHKSIS 269 (509)
Q Consensus 258 ~~~~~~l~~~~~ 269 (509)
+++++++.+...
T Consensus 216 ~~~~~~l~~~~~ 227 (361)
T cd06452 216 EEWADIVFRTSQ 227 (361)
T ss_pred HHHHHHHhcccc
Confidence 889988866543
No 146
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=2.5e-23 Score=214.57 Aligned_cols=319 Identities=13% Similarity=0.149 Sum_probs=203.8
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCC---cccCCC--CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQS---VGSYTD--SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~---~~~Y~~--~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
+.+.+|+.+++++.+.+....... ...+++ .....++|+.+++++ |.+ ++++|++|+|++++++.++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~g~t~a~~~~~~~l 81 (373)
T cd06453 7 ATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI----NAP-SPDEIIFTRNTTEAINLVAYGL 81 (373)
T ss_pred cccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CCC-CCCeEEEeCCHHHHHHHHHHHh
Confidence 445668899999988886532110 111111 234557788888887 321 3679999999999999999999
Q ss_pred hc---CCCCCCCeEEEcCCCChhH----HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 97 IE---DVDGKKPGVLIPIPQYPLY----SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 97 ~~---~gd~~~~~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
.. +|+ +|+++.++|.+. ...++..|++++.++.+.+ +.+|++.+++.+.+ ++++|++++|+|
T Consensus 82 ~~~~~~g~----~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~-----~~~~v~~~~~~~ 150 (373)
T cd06453 82 GRANKPGD----EIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD--GQLDLEALEKLLTE-----RTKLVAVTHVSN 150 (373)
T ss_pred hhcCCCCC----EEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC--CCcCHHHHHHHhcC-----CceEEEEeCccc
Confidence 87 677 999999999874 3344577999999998743 57899999999987 799999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeE
Q psy13922 170 PTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGG 249 (509)
Q Consensus 170 PtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G 249 (509)
|||...+ +++|+++|+++|++||+|++|...... ..+.. . ..++++ .|++|.+ |. .++|
T Consensus 151 ~tG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~-----~~~~~----~-----~~d~~~-~s~~K~~-~~--~g~g 209 (373)
T cd06453 151 VLGTINP---VKEIGEIAHEAGVPVLVDGAQSAGHMP-----VDVQD----L-----GCDFLA-FSGHKML-GP--TGIG 209 (373)
T ss_pred ccCCcCC---HHHHHHHHHHcCCEEEEEhhhhcCcee-----eeccc----c-----CCCEEE-ecccccc-CC--CCcE
Confidence 9999988 788999999999999999998753211 11111 1 122444 4888999 43 5689
Q ss_pred EEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCc
Q psy13922 250 YSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPS 329 (509)
Q Consensus 250 ~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 329 (509)
+++ .++++++.+............. .++...|.... -.++.+++......++..++.
T Consensus 210 ~~~---~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~~-----~~~~~~t~~~~~~~al~~al~-------- 266 (373)
T cd06453 210 VLY---GKEELLEEMPPYGGGGEMIEEV-------SFEETTYADLP-----HKFEAGTPNIAGAIGLGAAID-------- 266 (373)
T ss_pred EEE---EchHHhhcCCCeecCCCccccc-------cccccccCCCc-----cccCCCCCCHHHHHHHHHHHH--------
Confidence 887 6788888776543211111100 00000110000 001122222223333333221
Q ss_pred hHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC---CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhc
Q psy13922 330 YEQFS-REKQSVLDSLKQRAKMVADTFNSIEGMSCNPV---QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERT 405 (509)
Q Consensus 330 ~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~ 405 (509)
... ..++.+++..+++++++.+.|.++++++++.+ .++ ++++.+. +. +..+ +.+.|.++
T Consensus 267 --~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~~------------~~-~~~~-i~~~l~~~ 329 (373)
T cd06453 267 --YLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAG-VVSFNLE------------GI-HPHD-VATILDQY 329 (373)
T ss_pred --HHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCC-eEEEEEC------------Cc-CHHH-HHHHHHHC
Confidence 111 12566778888889999999999988887632 333 4444443 11 2233 45566778
Q ss_pred CeEEecCCCCCC
Q psy13922 406 GICIVPGAGFGQ 417 (509)
Q Consensus 406 gI~v~pg~~f~~ 417 (509)
||.+.+|..|..
T Consensus 330 gi~i~~g~~~~~ 341 (373)
T cd06453 330 GIAVRAGHHCAQ 341 (373)
T ss_pred CEEeccCccchh
Confidence 999988775543
No 147
>PRK07179 hypothetical protein; Provisional
Probab=99.92 E-value=2.6e-22 Score=209.55 Aligned_cols=325 Identities=14% Similarity=0.133 Sum_probs=216.3
Q ss_pred CHHHHHHHHHHHhcccCCC--cccC-CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQS--VGSY-TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~--~~~Y-~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
.|.+++++.+++.+..... ...| .......+|++.+++++ | .+.+++|+|+++|+..+++++..+|+
T Consensus 70 ~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g----~~~~~~~~sG~~An~~~l~~l~~~g~-- 139 (407)
T PRK07179 70 HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----G----FESCLLCQSGWAANVGLLQTIADPNT-- 139 (407)
T ss_pred CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHhCCCCC--
Confidence 4789999999887642221 1112 22223467888888887 3 34678899999999999999999888
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
.|++..+.|......++..|++++.++ ..|++.|++.+++. ++++|++++++||||.+++ +++|
T Consensus 140 --~v~~~~~~h~s~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~----~~~lV~v~~v~n~tG~i~p---l~~I 203 (407)
T PRK07179 140 --PVYIDFFAHMSLWEGVRAAGAQAHPFR-------HNDVDHLRRQIERH----GPGIIVVDSVYSTTGTIAP---LADI 203 (407)
T ss_pred --EEEEECCcCHHHHHHHHHCCCeEEEec-------CCCHHHHHHHHHhc----CCeEEEECCCCCCCCcccc---HHHH
Confidence 999999999988888888898877654 24899999999763 4788888999999999999 7889
Q ss_pred HHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHH
Q psy13922 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAM 263 (509)
Q Consensus 184 ~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~ 263 (509)
.++|+++|+++|+||+|....++. ...++.. ..+.. +.. .+++.|+||.+ | + |+||++ .++++++.
T Consensus 204 ~~l~~~~~~~livDea~~~g~~g~--~g~g~~~---~~~~~-~~v-di~~~S~sK~~-g-~--~~G~l~---~~~~~~~~ 269 (407)
T PRK07179 204 VDIAEEFGCVLVVDESHSLGTHGP--QGAGLVA---ELGLT-SRV-HFITASLAKAF-A-G--RAGIIT---CPRELAEY 269 (407)
T ss_pred HHHHHHcCCEEEEECcccccCcCC--CCCchHH---hcCCC-CCC-CEEEeechHhh-h-c--cCeEEE---eCHHHHHH
Confidence 999999999999999998644321 1122221 11110 011 25567999998 4 2 689998 68888887
Q ss_pred HHHhhhc--ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHH
Q psy13922 264 LHKSISA--MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVL 341 (509)
Q Consensus 264 l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (509)
+...... +.+..... ..+++..+++ ..+.....+
T Consensus 270 ~~~~~~~~~~~~t~~~~---------------------------------~~aa~~aal~-----------~~~~~~~~~ 305 (407)
T PRK07179 270 VPFVSYPAIFSSTLLPH---------------------------------EIAGLEATLE-----------VIESADDRR 305 (407)
T ss_pred HHHhCcCeeeCCCCCHH---------------------------------HHHHHHHHHH-----------HHhcCHHHH
Confidence 7654321 11111110 1111111111 112234567
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCc
Q psy13922 342 DSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGT 421 (509)
Q Consensus 342 ~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~ 421 (509)
+.++++++++.+.|.++ |+++. +.+. ++++.+.... ....+...|.++||.+. .|..
T Consensus 306 ~~l~~~~~~l~~~L~~~-g~~v~-~~~~-i~~l~~~~~~-------------~~~~~~~~L~~~GI~~~---~~~~---- 362 (407)
T PRK07179 306 ARLHANARFLREGLSEL-GYNIR-SESQ-IIALETGSER-------------NTEVLRDALEERNVFGA---VFCA---- 362 (407)
T ss_pred HHHHHHHHHHHHHHHHc-CCCCC-CCCC-EEEEEeCCHH-------------HHHHHHHHHHHCCceEe---eecC----
Confidence 88999999999999988 77766 4444 4454443111 12224566777899743 2222
Q ss_pred cccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHH
Q psy13922 422 YHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFRE 499 (509)
Q Consensus 422 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~ 499 (509)
++. ..+..++||++. +++++++++++.|++
T Consensus 363 --------------------------------------------p~~----~~~~~~lRis~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 363 --------------------------------------------PAT----PKNRNLIRLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred --------------------------------------------CCC----CCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 110 011228999998 799999999999999
Q ss_pred HHHHHHh
Q psy13922 500 FHEEFLA 506 (509)
Q Consensus 500 ~~~~~~~ 506 (509)
+++++.-
T Consensus 395 ~~~~~~~ 401 (407)
T PRK07179 395 ARDEVDL 401 (407)
T ss_pred HHHhhCC
Confidence 9887543
No 148
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=1.6e-23 Score=217.99 Aligned_cols=323 Identities=10% Similarity=0.114 Sum_probs=208.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.+.+++.+++++.... .+.|+...+ .++.+.+++++ +.. .++++++++|+++++..+++.++.+|+ +.
T Consensus 61 ~p~v~~ai~~~~~~~~~~-~~~~~~~~~-~~la~~l~~~~----~~~-~~~~v~~~~sgsea~~~al~~~~~~g~---~~ 130 (398)
T PRK03244 61 HPAVVEAVTRQLATLGHV-SNLFATEPQ-IALAERLVELL----GAP-EGGRVFFCNSGAEANEAAFKLARLTGR---TK 130 (398)
T ss_pred CHHHHHHHHHHHHhccCc-cCccCCHHH-HHHHHHHHHhC----CCC-CCCEEEEeCchHHHHHHHHHHHHHHCC---Ce
Confidence 588999999999874322 234765444 44555555543 422 357999999999999999998877652 36
Q ss_pred EEEcCCCChhHHHHHHhc-CCEEEEEecC---CC-CCC-CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH-HH
Q psy13922 107 VLIPIPQYPLYSASLAEF-NMEQIGYYLD---ES-KQW-GLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK-EN 179 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~---~~-~~~-~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~-~~ 179 (509)
|+..+++|+++....... |......+.. .. ..+ ..|++.+++.+.+ ++++|+++.++||+|.++++ ++
T Consensus 131 ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~aviiep~~~~~G~~~~~~~~ 205 (398)
T PRK03244 131 IVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDD-----DTAAVFLEPIQGEAGVVPPPAGY 205 (398)
T ss_pred EEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcC-----CeEEEEEecccCCCCCcCCCHHH
Confidence 888888999876544432 2211111100 00 000 1378999988864 79999999999999998865 45
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|.++|++||+++|+||+|.+|...+. ...+. . .++.+ ++ .+|||.+ | +|+|+||++ .+++
T Consensus 206 l~~l~~l~~~~~~llI~DEv~~g~gr~g~--~~~~~-~-~~~~p-----Di---~t~sK~l-~-~G~~ig~~~---~~~~ 268 (398)
T PRK03244 206 LAAAREITDRHGALLVLDEVQTGIGRTGA--WFAHQ-H-DGVTP-----DV---VTLAKGL-G-GGLPIGACL---AFGP 268 (398)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCcccch--HHhhh-h-hCCCC-----CE---EEEchhh-h-CCcccEEEE---EcHH
Confidence 99999999999999999999998766431 11111 1 12211 23 3779999 5 899999998 7888
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+..... ...+.+.+ .+++....++ ..+ .+
T Consensus 269 ~~~~~~~~~~~~t~~~~~~----------------------------------~~aaa~a~l~-----------~~~-~~ 302 (398)
T PRK03244 269 AADLLTPGLHGSTFGGNPV----------------------------------ACAAALAVLD-----------TIA-SE 302 (398)
T ss_pred HHhhccCCCCcCCCCCCHH----------------------------------HHHHHHHHHH-----------HHH-hc
Confidence 8888764322 23344455 2333222211 000 12
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCee--ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSC--NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
...+.++++.+.+.+.|+++ +... .....|.++|+.++.+ .... +...+.++||.+.|..
T Consensus 303 ~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~-------------~~~~-~~~~l~~~Gv~~~~~~--- 364 (398)
T PRK03244 303 GLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP-------------VAKA-VEAAAREAGFLVNAVA--- 364 (398)
T ss_pred cHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc-------------HHHH-HHHHHHHCCeEEeecC---
Confidence 34556666677778888775 3321 1223677788776411 1223 3455667899998621
Q ss_pred CCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHH
Q psy13922 417 QVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAML 494 (509)
Q Consensus 417 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~ 494 (509)
+. .+|+++. .++++|++++
T Consensus 365 -------------------------------------------------~~----------~iR~~p~~~~t~~~i~~~~ 385 (398)
T PRK03244 365 -------------------------------------------------PD----------VIRLAPPLIITDAQVDAFV 385 (398)
T ss_pred -------------------------------------------------CC----------EEEEECCCcCCHHHHHHHH
Confidence 11 7999955 7899999999
Q ss_pred HHHHHHHHHH
Q psy13922 495 EKFREFHEEF 504 (509)
Q Consensus 495 ~~l~~~~~~~ 504 (509)
++|.+++.+.
T Consensus 386 ~~l~~~l~~~ 395 (398)
T PRK03244 386 AALPAILDAA 395 (398)
T ss_pred HHHHHHHHhc
Confidence 9999999764
No 149
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.92 E-value=1.6e-22 Score=206.82 Aligned_cols=338 Identities=11% Similarity=0.100 Sum_probs=211.3
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCC
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDG 102 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~ 102 (509)
+-..++.+.+++...+.. ....|. .-...+|+.+++++ |.+-+...|++++|+++++..++..+..+++
T Consensus 7 p~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~la~~~----~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~- 75 (355)
T TIGR03301 7 PLSTSATVRDAMLVDWCH----WDSEFN--DVTDQVRDRLLALA----GGDDNHTCVLLQGSGTFAVEATIGSLVPRDG- 75 (355)
T ss_pred CCCCCHHHHHHhhhhccC----CCHHHH--HHHHHHHHHHHHHh----cCCCCCcEEEEeCCcHHHHHHHHHhccCCCC-
Confidence 444677888887662211 112243 33466777777777 4332223688899999999999999988776
Q ss_pred CCCeEEEcCCC-Chh-HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 103 KKPGVLIPIPQ-YPL-YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 103 ~~~~Vlv~~p~-y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
.+++..+. |.. +...++..|.+++.++.+++ +.+|++.+++.+++. ++++++++++++||||...+ +
T Consensus 76 ---~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~--~~~d~~~l~~~l~~~---~~~~~v~~~~~~~~~G~~~~---~ 144 (355)
T TIGR03301 76 ---KLLVLINGAYGERLAKICEYLGIPHTDLNFSEY--EPPDLNRIEEALAAD---PDITHVATVHHETTTGILNP---L 144 (355)
T ss_pred ---eEEEECCCchhhHHHHHHHHcCCceEEEecCCC--CCCCHHHHHHHHHhC---CCceEEEEEecCCcccchhH---H
Confidence 76665554 443 45677889999999987643 478999999998752 14667778899999999977 8
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGV 260 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~ 260 (509)
++|+++|+++++++|+|++++... ...++... +. .+++.|++|.+.|++| +||++ .++++
T Consensus 145 ~~i~~l~~~~~~~livD~~~s~g~-----~~~~~~~~---------~~-d~~~~s~~K~l~~~~G--~g~~~---~~~~~ 204 (355)
T TIGR03301 145 EAIAKVARSHGAVLIVDAMSSFGA-----IPIDIEEL---------DV-DALIASANKCLEGVPG--FGFVI---ARRDL 204 (355)
T ss_pred HHHHHHHHHcCCEEEEEeccccCC-----cccchhhc---------Cc-cEEEecCCcccccCCc--eeEEE---ECHHH
Confidence 899999999999999998776421 11222221 11 3557899998745556 69998 68888
Q ss_pred HHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHh-hhcccCcccccchhhcccCCCCCCCCchHHHHH--HH
Q psy13922 261 KAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAV-LDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR--EK 337 (509)
Q Consensus 261 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~--~~ 337 (509)
++.+......+. .+.... .++.... ....+.....+.++..++. ...+ .+
T Consensus 205 ~~~~~~~~~~~~-~~~~~~----------------~~~~~~~~~~~~t~~~~~~~a~~~al~----------~~~~~g~~ 257 (355)
T TIGR03301 205 LEASAGNARSLY-LDLYDQ----------------WAYMEKTGKWRFTPPTHTVYAFAQALE----------ELEAEGGV 257 (355)
T ss_pred HHHhhCCCCCce-eeHHHH----------------HHHhhhcCCCCCCCcHHHHHHHHHHHH----------HHHHcccH
Confidence 887752111000 000000 0000000 0000011112233332221 1111 14
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccC---CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPV---QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAG 414 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~ 414 (509)
++.++.++++++++.+.|+++ |+++..+ .+++++|+.++ .. ...+..+ +...|.++||.+.||..
T Consensus 258 ~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~~~-~~~~l~~~gi~i~~~~~ 325 (355)
T TIGR03301 258 PARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYP--DD--------PDFDFDD-FYQELKERGFVIYPGKL 325 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEECC--CC--------CcchHHH-HHHHHHHCCEEEECCcc
Confidence 667778888999999999887 7775432 34566776554 10 0001223 45667778999998653
Q ss_pred CCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHH
Q psy13922 415 FGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKA 492 (509)
Q Consensus 415 f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~ 492 (509)
+. . + ++|+++. ++++++++
T Consensus 326 ~~-------------------------------------------------~--~--------~iRis~~~~~~~~~i~~ 346 (355)
T TIGR03301 326 TL-------------------------------------------------A--D--------TFRIGTIGEIDAADIER 346 (355)
T ss_pred cc-------------------------------------------------c--c--------EEEEecCCCCCHHHHHH
Confidence 21 1 2 8999975 69999999
Q ss_pred HHHHHHHH
Q psy13922 493 MLEKFREF 500 (509)
Q Consensus 493 ~~~~l~~~ 500 (509)
+++.|+++
T Consensus 347 ~~~~l~~~ 354 (355)
T TIGR03301 347 LLEAIKDA 354 (355)
T ss_pred HHHHHHhh
Confidence 99999875
No 150
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.92 E-value=3.4e-22 Score=208.74 Aligned_cols=328 Identities=14% Similarity=0.114 Sum_probs=211.7
Q ss_pred CHHHHHHHHHHHhcccCCCc---ccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSV---GSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~---~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd 101 (509)
+|.+++++.++++....+.. ..|++.....+|++.+++++ | .++.+++++| +++...++..+.. +++
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~----g---~~~~~~~~sG-~~an~~ai~~l~~~~~~~ 133 (407)
T PRK09064 62 HPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH----G---KEAALVFTSG-YVSNDATLSTLAKLIPDC 133 (407)
T ss_pred CHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh----C---CCcEEEECcH-HHHHHHHHHHHhCCCCCC
Confidence 57899999998887432211 11334444566777777776 3 2345555555 5677777777654 444
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.|+.....|......+...+.++..++. .|++.+++.++... ..++++|++++++||+|.+.+ ++
T Consensus 134 ----~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~-~~~~~~v~~~~v~s~~G~~~~---l~ 198 (407)
T PRK09064 134 ----VIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAAD-PDRPKLIAFESVYSMDGDIAP---IA 198 (407)
T ss_pred ----EEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhcc-CCCCeEEEEeCCCCCCccccC---HH
Confidence 5666666677776777777887765542 37888888886421 126889999999999999987 88
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|.++|+++|+++|+||+|+...++.. ...+... .++. ....++++||||.| |++| ||++ ++++++
T Consensus 199 ~i~~l~~~~~~~livDEa~~~G~~g~~--g~g~~~~-~~~~----~~~div~~t~sKa~-g~~G---G~~~---~~~~~~ 264 (407)
T PRK09064 199 EICDLADKYNALTYLDEVHAVGMYGPR--GGGIAER-DGLM----DRIDIIEGTLAKAF-GVMG---GYIA---GSAALV 264 (407)
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCC--CCChHHh-cCCC----CCCeEEEEecchhh-hccC---ceEe---cCHHHH
Confidence 999999999999999999984433321 1222221 1111 11157788999999 7777 8987 788999
Q ss_pred HHHHHhhhcc---cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 262 AMLHKSISAM---LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 262 ~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+.+......+ .+.+.. .+++....++ +.+...
T Consensus 265 ~~l~~~~~~~~~t~~~~~~----------------------------------~~~aa~~al~-----------~~~~~~ 299 (407)
T PRK09064 265 DAVRSYAPGFIFTTSLPPA----------------------------------IAAAALASIR-----------HLKESN 299 (407)
T ss_pred HHHHHhCccccccCcCCHH----------------------------------HHHHHHHHHH-----------HHhcCH
Confidence 9887654322 122222 1222111111 111123
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
..++.++++++++.+.|+++ |+.+.++.++++ ++.+..+. ....+...+++++||.+++......+
T Consensus 300 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~iv-~i~~~~~~------------~~~~l~~~L~~~~gi~v~~~~~p~~~ 365 (407)
T PRK09064 300 EERERHQERAAKLKAALDAA-GIPVMPNESHIV-PVMVGDPE------------KCKKASDMLLEEHGIYVQPINYPTVP 365 (407)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEE-EEEeCCHH------------HHHHHHHHHHHhCCEEEeeECCCCCC
Confidence 34677888899999999987 787777666654 43343111 13344555667789999985533221
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEK 496 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~ 496 (509)
.+.. ++|+++. +++++++.+++.
T Consensus 366 -----------------------------------------------~~~~--------~lRis~~~~~t~edi~~l~~~ 390 (407)
T PRK09064 366 -----------------------------------------------RGTE--------RLRITPTPFHTDEMIDHLVEA 390 (407)
T ss_pred -----------------------------------------------CCCc--------eEEEEeCCCCCHHHHHHHHHH
Confidence 1222 8999987 899999999999
Q ss_pred HHHHHHHHH
Q psy13922 497 FREFHEEFL 505 (509)
Q Consensus 497 l~~~~~~~~ 505 (509)
|+++++++.
T Consensus 391 l~~~~~~~~ 399 (407)
T PRK09064 391 LVEVWARLG 399 (407)
T ss_pred HHHHHHHcC
Confidence 999887654
No 151
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.92 E-value=2.9e-22 Score=208.89 Aligned_cols=327 Identities=13% Similarity=0.105 Sum_probs=211.4
Q ss_pred CHHHHHHHHHHHhcccCCCcc---cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVG---SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~---~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd 101 (509)
+|.+++++.+++++...+... .|+......+|++.+++++ | .+..++++++++++..++..+.. +++
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~----g----~~~~l~~~sG~~an~~ai~~l~~~~~~~ 132 (402)
T TIGR01821 61 HPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLH----G----KESALVFTSGYVANDATLATLAKIIPGC 132 (402)
T ss_pred CHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHh----C----CCeEEEECchHHHHHHHHHHhhCCCCCC
Confidence 578999999999884322111 1233333466777777777 3 13455555557888888888865 444
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.|+.....|......+...|.++..++. .|++.+++.++... ..++++|++++|+||+|.+.+ ++
T Consensus 133 ----~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~-~~~~~~v~~e~~~~~~G~~~~---l~ 197 (402)
T TIGR01821 133 ----VIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVD-PNRPKIIAFESVYSMDGDIAP---IE 197 (402)
T ss_pred ----EEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhcc-CCCCeEEEEcCCCCCCCCccC---HH
Confidence 5666656676677777778887765542 26788888886421 125789999999999999988 89
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|.++|+++|+++|+||+|....++.. ...... ..+.. ....++++||||.+ |++| ||++ ++++++
T Consensus 198 ~i~~l~~~~~~~livDea~~~G~~g~~--g~g~~~-~~~~~----~~~div~~t~sKa~-g~~G---G~i~---~~~~~~ 263 (402)
T TIGR01821 198 EICDLADKYGALTYLDEVHAVGLYGPR--GGGIAE-RDGLM----HRIDIIEGTLAKAF-GVVG---GYIA---ASRKLI 263 (402)
T ss_pred HHHHHHHHcCCEEEEeCcccccccCCC--CCccch-hccCC----CCCeEEEEechhhh-ccCC---ceee---cCHHHH
Confidence 999999999999999999985444321 111111 11110 01146678999999 6777 8887 788999
Q ss_pred HHHHHhhhcc---cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 262 AMLHKSISAM---LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 262 ~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+.+......+ .+.+..++.+ +.++++.+.+ ..
T Consensus 264 ~~l~~~~~~~~~t~~~~~~~~aa------------------------------a~aaL~~~~~---------------~~ 298 (402)
T TIGR01821 264 DAIRSYAPGFIFTTSLPPAIAAG------------------------------ATASIRHLKE---------------SQ 298 (402)
T ss_pred HHHHHhCcCceecCcCCHHHHHH------------------------------HHHHHHHhhc---------------CH
Confidence 9887654321 1233321111 2222222111 23
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
.+++.+.++++++.+.|+++ |+.+.++.++++.+ .+..+. ....+...+++++||.+.+......+
T Consensus 299 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i~~i-~~~~~~------------~a~~~~~~L~~~~Gi~v~~~~~p~~~ 364 (402)
T TIGR01821 299 DLRRAHQENVKRLKNLLEAL-GIPVIPNPSHIVPV-IIGDAA------------LCKKVSDLLLNKHGIYVQPINYPTVP 364 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEE-EeCCHH------------HHHHHHHHHHhcCCEEEEeECCCCCC
Confidence 44556677888899999887 78777777766433 333111 12344555667789999985533331
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEK 496 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~ 496 (509)
.+. .++|+++. +++++++++++.
T Consensus 365 -----------------------------------------------~g~--------~~lRis~~~~~t~edi~~~~~~ 389 (402)
T TIGR01821 365 -----------------------------------------------RGT--------ERLRITPTPAHTDKMIDDLVEA 389 (402)
T ss_pred -----------------------------------------------CCC--------ceEEEEeCCCCCHHHHHHHHHH
Confidence 122 28999986 899999999999
Q ss_pred HHHHHHHH
Q psy13922 497 FREFHEEF 504 (509)
Q Consensus 497 l~~~~~~~ 504 (509)
|+++++++
T Consensus 390 l~~~~~~~ 397 (402)
T TIGR01821 390 LLLVWDRL 397 (402)
T ss_pred HHHHHHHc
Confidence 99988754
No 152
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.91 E-value=3.7e-22 Score=207.75 Aligned_cols=349 Identities=10% Similarity=0.040 Sum_probs=230.7
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
|+..+|+.|++++.+.+. . |. ..+..++++++++.+.+.+|.+ ..+.+++++|+++++..++..+.++||
T Consensus 16 GP~~~~~~V~~a~~~~~~-------~-~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd 85 (401)
T PLN02409 16 GPVNIPERVLRAMNRPNE-------D-HR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGD 85 (401)
T ss_pred CCCCCCHHHHHHhcCCCC-------C-CC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCC
Confidence 566678888888743221 1 22 3456788888888888888854 234688999999999999999999998
Q ss_pred CCCCeEEEcCCCChhH--HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 102 GKKPGVLIPIPQYPLY--SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
+|+++.+.|.+. ...++..|++++.++.+.+. .+|++.+++.++... .+++++|++++++||||.+++.++
T Consensus 86 ----~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~--~~~~~~l~~~l~~~~-~~~~k~v~~~~~~~~tG~~~~~~~ 158 (401)
T PLN02409 86 ----KVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQ--GADLDILKSKLRQDT-NHKIKAVCVVHNETSTGVTNDLAG 158 (401)
T ss_pred ----EEEEeCCCchhHHHHHHHHHcCCceEEEECCCCC--CCCHHHHHHHHhhCc-CCCccEEEEEeecccccccCCHHH
Confidence 999999988654 56778889999999987542 579999999998510 016899999999999999999555
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+.++++ |+++|+++|+|++++... ....+... +.++++. |.+|.+.| | .++||++ .+++
T Consensus 159 i~~l~~-~~~~g~~~vvD~v~s~g~-----~~id~~~~---------~~D~~~~-s~~K~l~~-P-~G~G~l~---~~~~ 217 (401)
T PLN02409 159 VRKLLD-CAQHPALLLVDGVSSIGA-----LDFRMDEW---------GVDVALT-GSQKALSL-P-TGLGIVC---ASPK 217 (401)
T ss_pred HHHHHh-hhccCcEEEEEcccccCC-----cccccccc---------CccEEEE-cCccccCc-C-CCcceeE---ECHH
Confidence 555555 999999999999987421 11111111 1235544 66999943 3 3689998 6888
Q ss_pred HHHHHHHhhhc--ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 260 VKAMLHKSISA--MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 260 ~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
.++++...... +.+.... ....+... ....++....+.++..+++ +- ....+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~g~------------~~~~Tp~~~~~~al~~al~--------~~-~~~G~ 271 (401)
T PLN02409 218 ALEASKTAKSPRVFFDWADY-----LKFYKLGT------------YWPYTPSIQLLYGLRAALD--------LI-FEEGL 271 (401)
T ss_pred HHHHHhcCCCCCeecCHHHH-----HHHHhcCC------------CCCCCccHHHHHHHHHHHH--------HH-HHhhH
Confidence 88887653321 0010000 00000000 0001111113444444433 11 11236
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCC----ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQ----GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
++++++.+++.+++.+.|+.+ |+++..+. .+...++.++ . ++. ...+...+++++||.+.+|.
T Consensus 272 e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p--~---------~~~-~~~l~~~l~~~~~i~i~~G~ 338 (401)
T PLN02409 272 ENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVP--E---------GID-SAEIVKNAWKKYNLSLGLGL 338 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCC--C---------CCC-HHHHHHHHHHhCCEEEEcCC
Confidence 788899999999999999888 88876432 3344454332 2 222 34556778889999999876
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHH
Q psy13922 414 GFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLK 491 (509)
Q Consensus 414 ~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~ 491 (509)
+-. ..+ .||++.. ++.+++.
T Consensus 339 ~~~--------------------------------------------------~~~--------~~Rig~~g~~~~~~~~ 360 (401)
T PLN02409 339 NKV--------------------------------------------------AGK--------VFRIGHLGNVNELQLL 360 (401)
T ss_pred Ccc--------------------------------------------------cCC--------EEEEcCCCCCCHHHHH
Confidence 421 112 8999988 7999999
Q ss_pred HHHHHHHHHHHHHH
Q psy13922 492 AMLEKFREFHEEFL 505 (509)
Q Consensus 492 ~~~~~l~~~~~~~~ 505 (509)
.++..|.+++.+..
T Consensus 361 ~~~~~~~~~l~~~g 374 (401)
T PLN02409 361 GALAGVEMVLKDVG 374 (401)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999887643
No 153
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.91 E-value=4.2e-22 Score=204.70 Aligned_cols=237 Identities=17% Similarity=0.206 Sum_probs=169.5
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhH----HHH
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY----SAS 120 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~----~~~ 120 (509)
.+++|+.+. ..+|++.++++++ .+..++++|+++++..++ .+.++|| +|+++.|.|.+. ...
T Consensus 45 ~y~r~~~pt-~~~le~~la~l~g--------~~~~~~~~sG~~ai~~~~-~ll~~Gd----~Vl~~~~~y~~t~~~~~~~ 110 (366)
T PRK08247 45 DYSRTGNPT-RGVLEQAIADLEG--------GDQGFACSSGMAAIQLVM-SLFRSGD----ELIVSSDLYGGTYRLFEEH 110 (366)
T ss_pred cccCCCCch-HHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHH-HHhCCCC----EEEEecCCcCcHHHHHHHH
Confidence 455666544 4789999999883 233577888889998776 5778888 999999999874 344
Q ss_pred HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 121 LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 121 ~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
++..|+++..++. .|++.+++.+++ ++++|++++|+||+|. ..++++|+++|+++|+++|+|++|
T Consensus 111 ~~~~G~~v~~vd~-------~d~~~l~~~i~~-----~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~ 175 (366)
T PRK08247 111 WKKWNVRFVYVNT-------ASLKAIEQAITP-----NTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTF 175 (366)
T ss_pred hhccCceEEEECC-------CCHHHHHHhccc-----CceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCC
Confidence 5568999988864 278999999877 7999999999999765 477999999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcc-cCcchhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAM-LCPTVLAL 279 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~-~~~~~~~~ 279 (509)
...... .++. ....++++|+||.++|.++++.|+++. .++++.+.+...+... ...+.+
T Consensus 176 ~~~~~~-----~p~~-----------~g~di~i~S~sK~~~g~~d~~~G~iv~--~~~~l~~~~~~~~~~~g~~~s~~-- 235 (366)
T PRK08247 176 YTPVLQ-----RPLE-----------EGADIVIHSATKYLGGHNDVLAGLVVA--KGQELCERLAYYQNAAGAVLSPF-- 235 (366)
T ss_pred cccccc-----Cchh-----------cCCcEEEeecceeccCCCceeeeEEec--ChHHHHHHHHHHHHhcCCCCChH--
Confidence 542221 1111 112577889999996656789999872 3478888887665522 223333
Q ss_pred hccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy13922 280 VSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIE 359 (509)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 359 (509)
.+..+...++ .+....+..+++++.+.+.|++.|
T Consensus 236 --------------------------------~a~l~~~~l~--------------tl~~r~~~~~~~a~~l~~~L~~~p 269 (366)
T PRK08247 236 --------------------------------DSWLLIRGMK--------------TLALRMRQHEENAKAIAAFLNEQP 269 (366)
T ss_pred --------------------------------HHHHHHhccC--------------cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1211111111 144455567999999999999998
Q ss_pred CCee--ccCCceeEEeecCC
Q psy13922 360 GMSC--NPVQGAMYAFPQMK 377 (509)
Q Consensus 360 g~~~--~~~~~g~~~~~~~~ 377 (509)
++.. +++.|+++.| .++
T Consensus 270 ~v~~v~~P~~gg~~sf-~~~ 288 (366)
T PRK08247 270 GVTDVLYPGRGGMLSF-RLQ 288 (366)
T ss_pred CeeEEecCCcCcEEEE-EEC
Confidence 8774 4558999988 454
No 154
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.91 E-value=2.5e-22 Score=207.38 Aligned_cols=348 Identities=18% Similarity=0.208 Sum_probs=216.9
Q ss_pred CCHHHHHHHHHHHhcccCC-CcccCCC----CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQ-SVGSYTD----SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV 100 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~-~~~~Y~~----~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g 100 (509)
.|+.+.+++.+.++..... ....|+. ..+..++|+.++++++ .+ ..++|++|+|+++++..++.++.++|
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~-~~~~v~~~~g~t~al~~~~~~~~~~g 86 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFN----AP-SSAHVVFTNNATTALNIALKGLLKEG 86 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhC----cC-CCCeEEEeCCHHHHHHHHHHhccCCC
Confidence 4678999998888763211 1222443 2556788888888883 21 33589999999999999999998888
Q ss_pred CCCCCeEEEcCCCChhHHH----HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 101 DGKKPGVLIPIPQYPLYSA----SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
+ +|+++.+.|..+.. .++..|.+++.++.+++ +.+|++.+++.+++ +++++++++|+||||..++
T Consensus 87 d----~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~~~~-----~~~~v~~~~~~n~tG~~~~ 155 (376)
T TIGR01977 87 D----HVITTPMEHNSVARPLECLKEQIGVEITIVKCDNE--GLISPERIKRAIKT-----NTKLIVVSHASNVTGTILP 155 (376)
T ss_pred C----EEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC--CCcCHHHHHHhcCC-----CCeEEEEECCCCCccccCC
Confidence 8 99999999887653 44556999999987643 57899999999976 7999999999999999998
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
+++|.++|+++|+++|+|++++..... ..+.. . ..+++ +.|.+|.+.|..| .|.+++ .
T Consensus 156 ---~~~i~~l~~~~~~~livD~a~~~g~~~-----~~~~~----~-----~~D~~-~~s~~K~l~~p~g--~g~l~~--~ 213 (376)
T TIGR01977 156 ---IEEIGELAQENGIFFILDAAQTAGVIP-----IDMTE----L-----AIDML-AFTGHKGLLGPQG--TGGLYI--R 213 (376)
T ss_pred ---HHHHHHHHHHcCCEEEEEhhhccCccC-----CCchh----c-----CCCEE-EecccccccCCCC--ceEEEE--c
Confidence 678889999999999999999763321 11111 1 22255 4588998844445 454442 4
Q ss_pred CHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH-
Q psy13922 257 DPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR- 335 (509)
Q Consensus 257 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~- 335 (509)
+... +............. .+..++. ....++.++.......++..+++ .+.+
T Consensus 214 ~~~~---~~~~~~~~~~~~~~-------~~~~~~~-------~~~r~~~~t~~~~~~~a~~~al~----------~~~~~ 266 (376)
T TIGR01977 214 EGIK---LKPLKSGGTGSHSA-------LIDQPSE-------LPDRFESGTLNTPGIAGLNAGIK----------FIEKI 266 (376)
T ss_pred CCcC---cCceecCCCccccc-------ccccccc-------chhhccCCCCCHHHHHHHHHHHH----------HHHHh
Confidence 4331 22211111000000 0000000 00011122222223333333322 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC----ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ----GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
..+.++++.+++.+.+.+.|.+++++++..+. ....+++.++ ++ +...+...+.+++||.+.+
T Consensus 267 g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~------------~~-~~~~~~~~L~~~~gi~v~~ 333 (376)
T TIGR01977 267 GIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE------------GI-DSEEVADILDEKFDIATRT 333 (376)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC------------CC-CHHHHHHHHhccCCEEEEc
Confidence 24667788889999999999988888876431 1234444443 22 2334344444445999998
Q ss_pred CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHH
Q psy13922 412 GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEK 489 (509)
Q Consensus 412 g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~ 489 (509)
|..|... .. +.+| ....+ .||+++. ++.++
T Consensus 334 g~~~~~~-------------------------------~~------~~~g---~~~~~--------~iRis~~~~~t~~d 365 (376)
T TIGR01977 334 GLHCAPL-------------------------------AH------KTIG---TFATG--------TIRLSLGYFNTEEE 365 (376)
T ss_pred ccccchH-------------------------------HH------HHhC---CCCCC--------eEEEecCCCCCHHH
Confidence 8766541 00 0000 01112 8999988 89999
Q ss_pred HHHHHHHHHH
Q psy13922 490 LKAMLEKFRE 499 (509)
Q Consensus 490 i~~~~~~l~~ 499 (509)
++.++++|++
T Consensus 366 v~~~~~~l~~ 375 (376)
T TIGR01977 366 IEKLLEALSE 375 (376)
T ss_pred HHHHHHHHhh
Confidence 9999998875
No 155
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.91 E-value=3.6e-22 Score=208.11 Aligned_cols=350 Identities=15% Similarity=0.119 Sum_probs=219.1
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCcc-cC----CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVG-SY----TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~-~Y----~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 97 (509)
....|+.+++++.+.+......... .+ .......++|+.+++++ | .++++|++|+|++++++.++.++.
T Consensus 12 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~v~~~~g~t~a~~~~l~~l~ 85 (402)
T TIGR02006 12 TTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI----G--ADSREIVFTSGATESNNLAIKGIA 85 (402)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCCHHHHHHHHHHHHH
Confidence 3456889999998887642111111 01 11234566778888877 3 567899999999999999988764
Q ss_pred ----cCCCCCCCeEEEcCCCChhHHHHH---HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 98 ----EDVDGKKPGVLIPIPQYPLYSASL---AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 98 ----~~gd~~~~~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
++|+ .|+++.+.|..+...+ +..|.+++.++.+++ +.+|++.+++.+++ ++++|++++++||
T Consensus 86 ~~~~~~g~----~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~-----~~~lv~v~~~~n~ 154 (402)
T TIGR02006 86 HFYKSKGN----HIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSN--GLIDLEELKAAIRD-----DTILVSIMHVNNE 154 (402)
T ss_pred HhhcCCCC----EEEECCCccHHHHHHHHHHHhcCCEEEEEccCCC--CcCCHHHHHHhcCC-----CCEEEEEECCCcC
Confidence 4566 9999999998866554 456999999988754 47899999999876 7899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 171 TGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
||...+ +++|.++|+++|+++++|++++.... ...+.. . ..++++ .|.+|.+ |.+| +|+
T Consensus 155 tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~~-----~~~~~~----~-----~~D~~~-~s~~K~~-gp~G--~G~ 213 (402)
T TIGR02006 155 IGVIQD---IAAIGEICRERKVFFHVDAAQSVGKI-----PINVNE----L-----KVDLMS-ISGHKIY-GPKG--IGA 213 (402)
T ss_pred ceeccc---HHHHHHHHHHcCCEEEEEcchhcCCc-----ccCccc----c-----CCCEEE-Eehhhhc-CCCc--eEE
Confidence 999987 88999999999999999999975321 111111 1 222544 4778988 7667 566
Q ss_pred EeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 251 SEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 251 v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
+++ .++ ....+....... +.. ..++.++.......++..+++
T Consensus 214 l~~--~~~-~~~~~~~~~~g~-~~~-------------------------~~~~~gt~~~~~~~al~~al~--------- 255 (402)
T TIGR02006 214 LYV--RRK-PRVRLEALIHGG-GHE-------------------------RGMRSGTLPTHQIVGMGEAFR--------- 255 (402)
T ss_pred EEE--ccC-CCCCCCceecCC-Ccc-------------------------CCccCCCccHHHHHHHHHHHH---------
Confidence 652 322 222221111000 000 000111111113334433322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC---c-eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 331 EQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ---G-AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~-g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
...++++...+..+++++.+.+.|.+++++.+..+. . +.+ .+.|. ++ +.+.+ ...+ .+
T Consensus 256 -~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~-~v~f~------------~~-~~~~~-~~~l--~~ 317 (402)
T TIGR02006 256 -IAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNL-NVSFN------------YV-EGESL-IMAL--KD 317 (402)
T ss_pred -HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeE-EEEEe------------Cc-CHHHH-HHhc--CC
Confidence 122346777888999999999999988887765321 1 111 11122 11 12222 2223 48
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-- 484 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-- 484 (509)
|.+..|..|.. ....+-..++..|+......+ .+|+|+.
T Consensus 318 i~v~~G~~c~~-------------------------------~~~~~~~~l~~lg~~~~~~~~--------~vR~S~~~~ 358 (402)
T TIGR02006 318 LAVSSGSACTS-------------------------------ASLEPSYVLRALGINDELAHS--------SIRFTIGRF 358 (402)
T ss_pred EEEechhhcCC-------------------------------CCCCccHHHHHcCCChhhcCc--------eEEEEecCC
Confidence 99998887654 122222233444432222223 8999999
Q ss_pred cChHHHHHHHHHHHHHHHHHH
Q psy13922 485 PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~~~ 505 (509)
++.++++.+++.|+++++.++
T Consensus 359 ~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 359 TTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999987653
No 156
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=3.6e-21 Score=199.54 Aligned_cols=209 Identities=12% Similarity=0.101 Sum_probs=157.4
Q ss_pred CCCCHHHHHHHHHHHhcccC-CC---cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 24 PRFPDDVKQRAQAVLDGCRG-QS---VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~-~~---~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
.++++.+++++.+....... .+ ...+.......++++.+|++++ .+++++|+|+++++..++.+++++
T Consensus 30 ~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~~g~t~a~~~al~~l~~~ 101 (387)
T PRK09331 30 GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVTHGAREGKFAVMHSLCKK 101 (387)
T ss_pred CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhcCC
Confidence 34577899999888854221 11 1112223356889999999883 246889999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc--cCCceEEEEeCCCCCCCCCCCH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK--HCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~--~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
|| .|+++.++|.+....++..|++++.++.+.+.++.+|++.+++.+++..+ .+++++|++++|+||||...+
T Consensus 102 gd----~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~- 176 (387)
T PRK09331 102 GD----YVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD- 176 (387)
T ss_pred CC----EEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc-
Confidence 88 99999999998888888999999999984223467999999999975311 126899999999999999866
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++|+++|+++|+++|+|++|+.... ..+.... + . -+++.|++|++ | .+.++||++ .+
T Consensus 177 --l~~I~~la~~~g~~livD~a~~~g~~-----~~~~~~~----g-----~-D~~~~s~~K~l-~-~~~~~G~l~---~~ 234 (387)
T PRK09331 177 --AKKVAKVAHEYGIPFLLNGAYTVGRM-----PVDGKKL----G-----A-DFIVGSGHKSM-A-ASAPSGVLA---TT 234 (387)
T ss_pred --HHHHHHHHHHcCCEEEEECCcccCCc-----CCCHHHc----C-----C-CEEEeeCcccc-c-CCCCEEEEE---EC
Confidence 99999999999999999999985321 1222221 1 1 24466999999 5 556899987 67
Q ss_pred HHHHHHHHHh
Q psy13922 258 PGVKAMLHKS 267 (509)
Q Consensus 258 ~~~~~~l~~~ 267 (509)
+++++.+.+.
T Consensus 235 ~~~i~~~~~~ 244 (387)
T PRK09331 235 EEYADKVFRT 244 (387)
T ss_pred HHHHhhcccc
Confidence 8888877553
No 157
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=3.4e-22 Score=206.61 Aligned_cols=217 Identities=14% Similarity=0.126 Sum_probs=147.9
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-CCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-DVDGKK 104 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~~~ 104 (509)
-+|.+.+++.++++... . ++. ....+++.++++++.+..+ .+.+++++++++|+..+++.... ++ +
T Consensus 46 ~~p~v~~a~~~~~~~~~---~--~~~-~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a~~~A~~~a~~~~g---~ 112 (377)
T PRK02936 46 CHPTVTKAVQEQLDDIW---H--VSN-LFTNSLQEEVASLLAENSA----GDLVFFCNSGAEANEAALKLARKHTG---K 112 (377)
T ss_pred CCHHHHHHHHHHHHhcc---c--ccc-ccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHHHHHHHHHHHHhcC---C
Confidence 47889999999998721 1 111 2336789999999976533 35899999999999999986543 33 2
Q ss_pred CeEEEcCCCChhHHHHHHh-cCCEEE---EEecCCCCCC--CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC-CCH
Q psy13922 105 PGVLIPIPQYPLYSASLAE-FNMEQI---GYYLDESKQW--GLPISELERSITEARKHCNPRAIVIINPGNPTGQV-LTK 177 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~-~g~~~~---~v~~~~~~~~--~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~-~s~ 177 (509)
+.|++.++.|++....... .+.... ..+..++..+ ..|++.+++.+.+ ++++|++..+++++|.. .++
T Consensus 113 ~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~ii~e~i~~~~G~~~~~~ 187 (377)
T PRK02936 113 SKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-----EVAAVMLEVVQGEGGVIPADP 187 (377)
T ss_pred CeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-----CeEEEEEecccCCCCCccCCH
Confidence 3799999999865433222 222111 0111111000 1278999988875 78999999899999975 688
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++++|.++|++||+++|+||+|.+|.+++. +.+.... .+.+ ++ .++||.+ | +|+|+||++ ++
T Consensus 188 ~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~--~~~~~~~--~~~~-----di---~t~sK~l-~-~G~~ig~v~---~~ 250 (377)
T PRK02936 188 AFLQEVQTLCKKFGALLIIDEVQTGIGRTGT--LFAYEQF--GLDP-----DI---VTVAKGL-G-NGIPVGAMI---GK 250 (377)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCcCch--hhHHHhh--CCCC-----cE---EEEcccc-c-CCCccEEEE---Ec
Confidence 9999999999999999999999998876542 2222211 1111 13 3789999 6 899999998 78
Q ss_pred HHHHHHHHHhhh-cccCcchh
Q psy13922 258 PGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 258 ~~~~~~l~~~~~-~~~~~~~~ 277 (509)
+++++.+..... .+.+.+.+
T Consensus 251 ~~~~~~~~~~~~~~t~~~~~~ 271 (377)
T PRK02936 251 KELGTAFGPGSHGSTFGGNPL 271 (377)
T ss_pred HHHHhhccCCCCCCCCCCCHH
Confidence 999988864332 23345555
No 158
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.91 E-value=2.4e-22 Score=204.96 Aligned_cols=263 Identities=15% Similarity=0.126 Sum_probs=183.9
Q ss_pred CCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC---
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV--- 100 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g--- 100 (509)
+..|..+.+.+...+.. .. ..|+...+..++++++++++.+.+|.+.+.+++++|+|+++++..++.+++...
T Consensus 9 ~~~~~~~~~~~~~~~n~---~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~ 84 (345)
T cd06450 9 MDPPALLLEMLTSAKNA---ID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKR 84 (345)
T ss_pred CcHHHHHHHHHHHhcCC---CC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhh
Confidence 33344445555444444 22 338888888999999999999988866455689999999999999999886420
Q ss_pred -------CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCC
Q psy13922 101 -------DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTG 172 (509)
Q Consensus 101 -------d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG 172 (509)
.+.+..|+++.++|..+...+...|.+++.++.+++ +.+|++.|++.+.+.... .++++|++++|+||||
T Consensus 85 ~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG 162 (345)
T cd06450 85 LKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTG 162 (345)
T ss_pred hhcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCC
Confidence 011337888999999999888888999999998765 388999999999763221 2577888899999999
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
.+.+ +++|+++|+++|+++++|++|..+..... ..... .... .+.++++ .|++|.+ + ++.++|++.
T Consensus 163 ~~~~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~-~~~~~---~~~~----~~~d~~~-~s~~K~l-~-~p~g~g~~~ 228 (345)
T cd06450 163 AIDP---LEEIADLAEKYDLWLHVDAAYGGFLLPFP-EPRHL---DFGI----ERVDSIS-VDPHKYG-L-VPLGCSAVL 228 (345)
T ss_pred CCCC---HHHHHHHHHHhCCeEEEechhhHHHhhCh-hhHHH---hcCc----cccCEEE-EchhHhh-C-CCcchHHHH
Confidence 9855 89999999999999999999988764311 11110 0000 1223444 4999987 3 667888875
Q ss_pred eecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 253 VINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
+ + .++ ...++..+ .
T Consensus 229 ~---~------------------~~~---------------------------------~~~~l~~l-~----------- 242 (345)
T cd06450 229 V---R------------------ALK---------------------------------LWATLRRF-G----------- 242 (345)
T ss_pred H---H------------------HHH---------------------------------HHHHHHHH-h-----------
Confidence 2 2 110 11111111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec-cCCceeEEe
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNSIEGMSCN-PVQGAMYAF 373 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~g~~~~ 373 (509)
...+++.+++..++++++.+.|.+++++.+. +++++++.|
T Consensus 243 -~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f 283 (345)
T cd06450 243 -RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCF 283 (345)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEE
Confidence 0125677788888999999999998888765 456676665
No 159
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=1.2e-21 Score=201.01 Aligned_cols=198 Identities=18% Similarity=0.221 Sum_probs=152.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 19 QLFDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 19 ~~~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
..+|.+..|+++++++.+++.+ |. +..++++++++++.+.+| .+++++|+|+++++.+++.++++
T Consensus 18 t~~g~s~~~~~v~~a~~~~~~~--------~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al~~al~al~~ 82 (363)
T TIGR01437 18 TILGVSTVSDEVADAQKRGAQN--------YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGIAQSVAAVIT 82 (363)
T ss_pred ecCCCCCCCHHHHHHHHHHHhc--------CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHHHHHHHHHhc
Confidence 3457888999999999998755 32 245677777777777666 35789999999999999999988
Q ss_pred CCC-----------CCCCeEEEcCCCChhH----HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEE
Q psy13922 99 DVD-----------GKKPGVLIPIPQYPLY----SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIV 163 (509)
Q Consensus 99 ~gd-----------~~~~~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~iv 163 (509)
+|| ..++.|+++.|.|..| ...+...|++++.++.+ +.+|++.+++++++ ++++++
T Consensus 83 ~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~-----~t~ai~ 153 (363)
T TIGR01437 83 RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITE-----KTAAIL 153 (363)
T ss_pred CCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcCh-----hceEEE
Confidence 875 1244899999888765 46677889999998763 36899999999987 788777
Q ss_pred -EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 164 -IINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 164 -i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
+++|+||+|.+.+ +++|+++|+++|+++|+|++|.. ....+.. .+ .+++ +.|++|.+
T Consensus 154 ~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~-------~~~~~~~----~g-----~D~~-~~S~~K~l-- 211 (363)
T TIGR01437 154 YIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE-------DLQKYYR----LG-----ADLV-IYSGAKAI-- 211 (363)
T ss_pred EEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC-------chHHHHH----cC-----CCEE-EEeCCccc--
Confidence 5789999999988 77889999999999999999962 1111111 11 1244 56899976
Q ss_pred CCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 243 ECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 243 ~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
+|.++|+++ .++++++.++.
T Consensus 212 -~gp~~G~l~---~~~~~i~~~~~ 231 (363)
T TIGR01437 212 -EGPTSGLVL---GKKKYIEWVKL 231 (363)
T ss_pred -CCCceEEEE---EcHHHHHHHHh
Confidence 577899987 68888887654
No 160
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.91 E-value=1.5e-21 Score=200.69 Aligned_cols=313 Identities=13% Similarity=0.088 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhH--HHHHHhcCCEEEEEec
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY--SASLAEFNMEQIGYYL 133 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~ 133 (509)
.++|+.+++++ |.+-..++|++|+|++++++.++.++..+++ .+++..+.+.+. ...++..|.+++.++.
T Consensus 38 ~~~r~~la~l~----~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~----~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~ 109 (363)
T TIGR02326 38 EQIRQQLLALA----TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDG----KLLVVINGAYGARIVQIAEYLGIPHHVVDT 109 (363)
T ss_pred HHHHHHHHHHh----CCCCCceEEEEcCCCHHHHHHHHHhcCCCCC----eEEEEeCChhhHHHHHHHHHcCCceEEEeC
Confidence 45666666666 4322234799999999999999999988776 777766555544 4667889999999998
Q ss_pred CCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcccc
Q psy13922 134 DESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYS 213 (509)
Q Consensus 134 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~ 213 (509)
+++ ..+|++.+++.++.. ++++++.+++++||||..++ +++|.++|+++|+++|+|++++.. . ...+
T Consensus 110 ~~~--~~~d~~~l~~~l~~~---~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~g----~-~~~~ 176 (363)
T TIGR02326 110 GEV--EPPDVVEVEAILAAD---PAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSFG----G-IPID 176 (363)
T ss_pred CCC--CCCCHHHHHHHHhhC---CCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccccc----C-cccc
Confidence 753 378999999998752 14677888999999999998 789999999999999999887641 1 1223
Q ss_pred HHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhcccccc-CCCCCc
Q psy13922 214 FKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLF-DDPRFP 292 (509)
Q Consensus 214 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 292 (509)
+... +.+ +++.|++|.+.|.+| +|+++ .+++.++.+....... ..+..........- ....|.
T Consensus 177 ~~~~---------~~D-~~~~s~~K~l~~p~G--~G~l~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ft 240 (363)
T TIGR02326 177 IAEL---------HID-YLISSANKCIQGVPG--FGFVI---ARQAELAACKGNARSL-SLDLYDQWRCMEDNHGKWRFT 240 (363)
T ss_pred hhhc---------Ccc-EEEecCccccccCCc--ceEEE---ECHHHHHHhhcCCCce-eecHHHHHHHHhccCCCCCCC
Confidence 3222 122 446699998755556 69988 5777776653211000 00000000000000 000000
Q ss_pred hhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCeeccC---C
Q psy13922 293 DDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR--EKQSVLDSLKQRAKMVADTFNSIEGMSCNPV---Q 367 (509)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~---~ 367 (509)
.....+.++..+++ .+.. .+++..+++.++++++.+.|+++ |+....+ .
T Consensus 241 ---------------~~~~~~~al~~al~----------~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 294 (363)
T TIGR02326 241 ---------------SPTHVVHAFAQALL----------ELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQ 294 (363)
T ss_pred ---------------CcHHHHHHHHHHHH----------HHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccC
Confidence 01113333333322 1111 15667789999999999999888 7776532 4
Q ss_pred ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCC
Q psy13922 368 GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKC 447 (509)
Q Consensus 368 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 447 (509)
++...|+.++... .+ +... +...|+++||.+.||..+.
T Consensus 295 ~~~~~~~~~~~~~---------~~-~~~~-v~~~L~~~gi~v~~g~~~~------------------------------- 332 (363)
T TIGR02326 295 SPIITSFYSPEDP---------DY-RFAD-FYQRLKEQGFVIYPGKVSQ------------------------------- 332 (363)
T ss_pred CceEEEEECCCCC---------CC-CHHH-HHHHHHHCCEEEECCcCCC-------------------------------
Confidence 5566665554100 01 1233 3455677899999876431
Q ss_pred CchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe-e-cChHHHHHHHHHHHHHH
Q psy13922 448 PSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI-L-PQPEKLKAMLEKFREFH 501 (509)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~-~-~~~~~i~~~~~~l~~~~ 501 (509)
.. +||+++ + ++.++++++++.|++++
T Consensus 333 ------------------~~----------~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 333 ------------------VD----------CFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred ------------------CC----------EEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 11 899996 4 79999999999998876
No 161
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.91 E-value=2.2e-22 Score=210.39 Aligned_cols=209 Identities=12% Similarity=0.128 Sum_probs=145.3
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVDGK 103 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~~ 103 (509)
-+|.+.+++.+++.. .+.|+...+..++...+++.+.+.++ ...+++++++|+++|+..+++.++. +++
T Consensus 53 ~~p~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgsea~~~al~~~~~~~~~~-- 123 (413)
T cd00610 53 NHPEVVEALKEQLAK-----LTHFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTEAVEAALKLARAYTGRK-- 123 (413)
T ss_pred CCHHHHHHHHHHHHh-----CcCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHHHHHHHHHHHHHcCCC--
Confidence 478899999999866 12344332345566666666665555 3578999999999999999998853 444
Q ss_pred CCeEEEcCCCChhHHHHHHhcC-------------CEEEEEecCCC----CCCCCCHHHHHHHHHhhhccCCceEEEEeC
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFN-------------MEQIGYYLDES----KQWGLPISELERSITEARKHCNPRAIVIIN 166 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~----~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~ 166 (509)
.|++.+++|+++.......+ .+++.+|.++. ..+..|++.|++.+++.. .++++++++.
T Consensus 124 --~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~~~vi~~p 199 (413)
T cd00610 124 --KIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHP--EEVAAVIVEP 199 (413)
T ss_pred --eEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCC--CCEEEEEEcc
Confidence 99999999999765544332 23455554421 123458899999887521 1466777766
Q ss_pred CCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 167 PGNPTGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 167 p~NPtG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
.+|++|..+ +++++++|.++|++||+++|+||+|.++...+. .... +. .+..+ + +.|+||.+ | .|
T Consensus 200 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~--~~~~-~~-~~~~~-----d---~~t~sK~l-~-~g 265 (413)
T cd00610 200 IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGK--MFAF-EH-FGVEP-----D---IVTLGKGL-G-GG 265 (413)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--hhhH-hh-cCCCC-----C---eEEEcccc-c-Cc
Confidence 677889865 778899999999999999999999998754321 1111 11 11111 1 34889999 5 58
Q ss_pred CeeEEEeeecCCHHHHHHH
Q psy13922 246 LRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 246 lr~G~v~~~~~~~~~~~~l 264 (509)
+|+||++ +++++++.+
T Consensus 266 ~~~g~~~---~~~~~~~~~ 281 (413)
T cd00610 266 LPLGAVL---GREEIMDAF 281 (413)
T ss_pred cccEEEE---EcHHHHHhh
Confidence 9999998 788899886
No 162
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.90 E-value=2e-21 Score=200.11 Aligned_cols=320 Identities=11% Similarity=0.041 Sum_probs=201.9
Q ss_pred chHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhH--HHHHHhcCCEEEEE
Q psy13922 54 GIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY--SASLAEFNMEQIGY 131 (509)
Q Consensus 54 g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~--~~~~~~~g~~~~~v 131 (509)
-..++|+.+++++ |.+-..+.|++|+|+++++..++..+..+++ .|+++.++|.+. ...++..|++++.+
T Consensus 38 ~~~~~~~~l~~l~----~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~----~vlv~~~~~~~~~~~~~~~~~g~~~~~i 109 (368)
T PRK13479 38 LTASVRAKLVAIA----TGEEGYTCVPLQGSGTFSVEAAIGSLVPRDG----KVLVPDNGAYGARIAQIAEYLGIAHVVL 109 (368)
T ss_pred HHHHHHHHHHHHh----CCCCCceEEEEcCCcHHHHHHHHHhccCCCC----eEEEEeCCchHHHHHHHHHHcCCcEEEE
Confidence 4466777777777 4222235688999999999999999998887 999988887765 47778899999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
+.+++ +.+|++.+++.+++. +++++|++++|+||||...+ +++|.++|+++|+++|+|+++ .+.. ..
T Consensus 110 ~~~~~--~~~d~~~l~~~l~~~---~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~-~~g~----~~ 176 (368)
T PRK13479 110 DTGED--EPPDAAEVEAALAAD---PRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMS-SFGA----IP 176 (368)
T ss_pred ECCCC--CCCCHHHHHHHHHhC---CCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEccc-ccCC----cc
Confidence 98643 468999999998752 14678889999999999988 788999999999999999665 3321 11
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCC
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRF 291 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (509)
.++... +.+++ +.|++|.+.|++| +||++ .++++++.+......+ ..+.........--....|
T Consensus 177 ~~~~~~---------~~d~~-v~s~~K~l~g~~G--~G~l~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 240 (368)
T PRK13479 177 IDIAEL---------GIDAL-ISSANKCIEGVPG--FGFVI---ARRSELEACKGNSRSL-SLDLYDQWAYMEKTGQWRF 240 (368)
T ss_pred cccccc---------CceEE-EecCccccccCCC--ceEEE---ECHHHHHHhhcCCCCe-eecHHHHHhhhcccCCCCC
Confidence 222211 12244 5689997646777 59998 6888888775432111 0010000000000000001
Q ss_pred chhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC---c
Q psy13922 292 PDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ---G 368 (509)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~ 368 (509)
. .......++..+++ +-.....+++.++.+.++++.+.+.|+++ |+++..+. .
T Consensus 241 t---------------~~~~~~~~l~~al~--------~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 296 (368)
T PRK13479 241 T---------------PPTHVVAAFYQALL--------ELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQS 296 (368)
T ss_pred C---------------CcHHHHHHHHHHHH--------HHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcC
Confidence 0 00012222222221 00001124666788899999999999988 77765321 2
Q ss_pred eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCC
Q psy13922 369 AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCP 448 (509)
Q Consensus 369 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 448 (509)
+..+.+.+..+. ++ +... +...|.++||.+.+|..+.
T Consensus 297 ~~~~~~~~~~~~---------~~-~~~~-l~~~L~~~gi~v~~g~~~~-------------------------------- 333 (368)
T PRK13479 297 PIIVTFHAPADP---------AY-DFKE-FYERLKEQGFVIYPGKLTQ-------------------------------- 333 (368)
T ss_pred ceEEEEECCCCC---------Cc-CHHH-HHHHHHHCCEEEecCCCCC--------------------------------
Confidence 222222222110 11 2233 3555667799998864321
Q ss_pred chhhhhhhhhcccccccCCCCCCCCCCceeEEEEe-e-cChHHHHHHHHHHHHHHHHH
Q psy13922 449 SVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI-L-PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~-~-~~~~~i~~~~~~l~~~~~~~ 504 (509)
.. ++|++. . +++++++.+++.|++++++.
T Consensus 334 -----------------~~----------~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 334 -----------------VD----------TFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred -----------------CC----------EEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 11 799986 4 79999999999999998764
No 163
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=4.4e-21 Score=200.18 Aligned_cols=327 Identities=14% Similarity=0.124 Sum_probs=209.1
Q ss_pred CHHHHHHHHHHHhcccCCCcc---cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVG---SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~---~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd 101 (509)
+|.|++++.++++....+... .+....-..++++.+++++ | .+..++++++++++..++..+.. +++
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g----~~~~~~~~SG~~An~~ai~~l~~~~~g~ 132 (406)
T PRK13393 61 HPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLH----G----KEAALLFTSGYVSNWAALSTLGSRLPGC 132 (406)
T ss_pred CHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHh----C----CCcEEEeCCcHHHHHHHHHHhhcCCCCC
Confidence 578999999999874322111 0111222355666666666 3 24444444445788888887765 454
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.|++....|......+...|.++..++. .|++.+++.++... ..++++|++++++|++|.+.+ ++
T Consensus 133 ----~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~-~~~~~~v~~~~v~~~~G~~~~---l~ 197 (406)
T PRK13393 133 ----VILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLD-PHRPKLVAFESVYSMDGDIAP---IA 197 (406)
T ss_pred ----EEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhcc-CCCCEEEEEcCCCCCCCchhC---HH
Confidence 6666677777777788888888776653 36788888776421 125788889999999999988 88
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|.++|+++|+++|+||+|....++.. ...+... .++. ....|+++||||.+ |++| ||++ ++++++
T Consensus 198 ~i~~l~~~~~~~livDea~~~g~~g~~--G~g~~~~-~~~~----~~~~i~~~tlsKa~-g~~G---G~~~---~~~~~~ 263 (406)
T PRK13393 198 EICDVAEKHGAMTYLDEVHAVGLYGPR--GGGIAER-EGLA----DRLTIIEGTLAKAF-GVMG---GYIT---GSAALC 263 (406)
T ss_pred HHHHHHHHcCCEEEEECCccccccCCC--CCchhhh-cCCC----CCCeEEEEeCchhh-cccC---ceee---CCHHHH
Confidence 999999999999999999985444321 1222111 1111 11256678999999 6777 8987 789999
Q ss_pred HHHHHhhhcc---cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 262 AMLHKSISAM---LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 262 ~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+.+......+ .+.+.. .+++...+++ ...+ ..
T Consensus 264 ~~l~~~~~~~~~t~~~~p~----------------------------------~~aa~~aaL~----------~~~~-~~ 298 (406)
T PRK13393 264 DFIRSFASGFIFTTSLPPA----------------------------------VAAGALASVR----------HLKA-SS 298 (406)
T ss_pred HHHHHhCcCceecCccCHH----------------------------------HHHHHHHHHH----------HHhh-CH
Confidence 9887654422 122322 1222222211 0101 11
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
..+..++++.+++.+.|+++ ++.+.++.+.++.+ .+..+. ....+...+++++||.+.++.....+
T Consensus 299 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i~~v-~~~~~~------------~~~~l~~~L~~~~Gi~v~~~~~p~~p 364 (406)
T PRK13393 299 AERERHQDRVARLRARLDKA-GIPHLPNPSHIVPV-MVGDPV------------LCKQISDELLDRYGIYVQPINYPTVP 364 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCeEEE-EeCCHH------------HHHHHHHHHHHhCCEEEEeECCCCCC
Confidence 22456678888899999887 77777777776544 232111 12344455566679999986543331
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEK 496 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~ 496 (509)
.+.. ++|+++. +++++++++++.
T Consensus 365 -----------------------------------------------~g~~--------~iRis~~~~~t~edid~l~~~ 389 (406)
T PRK13393 365 -----------------------------------------------RGTE--------RLRITPSPLHTDADIEHLVQA 389 (406)
T ss_pred -----------------------------------------------CCCc--------eEEEEECCCCCHHHHHHHHHH
Confidence 1222 8999887 899999999999
Q ss_pred HHHHHHHH
Q psy13922 497 FREFHEEF 504 (509)
Q Consensus 497 l~~~~~~~ 504 (509)
|+++++++
T Consensus 390 l~~~~~~~ 397 (406)
T PRK13393 390 LSEIWARL 397 (406)
T ss_pred HHHHHHhc
Confidence 99987653
No 164
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.90 E-value=4.1e-22 Score=207.21 Aligned_cols=320 Identities=12% Similarity=0.092 Sum_probs=198.0
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC-----CC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED-----VD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----gd 101 (509)
.|.|.+++.+++++... ..++-......+|.+.++++. + .+.+++++++++|+..+++..+.- |.
T Consensus 58 ~p~v~~ai~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~ 127 (396)
T PRK04073 58 HPKIIQALKDQADKVTL--TSRAFHSDQLGPWYEKVAKLT----G----KDMVLPMNTGAEAVETAIKAARRWAYDVKGV 127 (396)
T ss_pred CHHHHHHHHHHHhhccc--cccccCCHHHHHHHHHHHhcC----C----CCeEEEcCChHHHHHHHHHHHHHHhhhccCC
Confidence 68999999999887321 111111222234444444432 2 368999999999999999987531 11
Q ss_pred -CCCCeEEEcCCCChhHHHHHHh-cCCEEEE---EecCCC-CC-CCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 102 -GKKPGVLIPIPQYPLYSASLAE-FNMEQIG---YYLDES-KQ-WGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 102 -~~~~~Vlv~~p~y~~~~~~~~~-~g~~~~~---v~~~~~-~~-~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
..++.|+...-+|++....+.. .+..... -+..++ .. ...|++.+++.+.+ ++++|+++.++||+|..
T Consensus 128 ~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-----~~~~viiep~~~~~G~~ 202 (396)
T PRK04073 128 EPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITP-----NTAAFLVEPIQGEAGIN 202 (396)
T ss_pred CCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhccc-----CeEEEEEcCccCCCCCc
Confidence 1234788888888876533322 2211000 000000 00 01278899888865 78999999999999998
Q ss_pred CCH-HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 175 LTK-ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 175 ~s~-~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
+++ +++++|.++|+++|+++|+||+|.+|..++. ..+. +. .+.. .++ .++||.+ |.+|+|+||++
T Consensus 203 ~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~--~~~~-~~-~~~~-----pdi---~~~sK~l-g~gg~~ig~~~- 268 (396)
T PRK04073 203 IPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK--LFAC-DW-DNVT-----PDM---YILGKAL-GGGVFPISCVA- 268 (396)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH--HHHh-hh-cCCC-----CCE---EEecccc-cCCCCcceEEE-
Confidence 765 5799999999999999999999998765431 1111 11 1111 123 3679999 67889999998
Q ss_pred ecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 254 INLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 254 ~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
+++++++.+..... ...+.+.+++.+ +.+++..+.+
T Consensus 269 --~~~~i~~~~~~~~~~~t~~~~~~~~aa------------------------------a~aaL~~~~~----------- 305 (396)
T PRK04073 269 --ANRDILGVFTPGSHGSTFGGNPLACAV------------------------------SIAALEVLEE----------- 305 (396)
T ss_pred --EcHHHHhhhcCCCCCCCCCCCHHHHHH------------------------------HHHHHHHHHh-----------
Confidence 78999988864322 233445552222 2233322111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--CCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNSI--EGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~~--~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
+.+.+..+++.+++.+.|+++ +.+....+.| .++++++.. ....+. ..|.++||.+.
T Consensus 306 -----~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g-~~~~~~~~~--------------~~~~~~-~~l~~~Gv~~~ 364 (396)
T PRK04073 306 -----EKLPERSLELGEYFKEQLKEIDNPMIKEVRGRG-LFIGVELNE--------------PARPYC-EALKEEGLLCK 364 (396)
T ss_pred -----cCHHHHHHHHHHHHHHHHHhhcCCcccceecce-EEEEEEecc--------------hHHHHH-HHHHHCCeEEe
Confidence 123355566677778878775 2333334554 456665531 133444 44556799987
Q ss_pred cCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEE--eecChH
Q psy13922 411 PGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTT--ILPQPE 488 (509)
Q Consensus 411 pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls--~~~~~~ 488 (509)
+.. + + ++|++ +..+++
T Consensus 365 ~~~----------------------------------------------------~--~--------~iRi~p~l~~t~e 382 (396)
T PRK04073 365 ETH----------------------------------------------------E--T--------VIRFAPPLVITKE 382 (396)
T ss_pred cCC----------------------------------------------------C--C--------EEEEECCcccCHH
Confidence 521 1 2 89999 569999
Q ss_pred HHHHHHHHHHHHH
Q psy13922 489 KLKAMLEKFREFH 501 (509)
Q Consensus 489 ~i~~~~~~l~~~~ 501 (509)
++++++++|++++
T Consensus 383 ~i~~~~~~l~~~l 395 (396)
T PRK04073 383 ELDWAFEKIKAVL 395 (396)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998875
No 165
>PLN02242 methionine gamma-lyase
Probab=99.90 E-value=2.9e-21 Score=201.03 Aligned_cols=217 Identities=16% Similarity=0.139 Sum_probs=161.4
Q ss_pred chHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH-----HhcCCEE
Q psy13922 54 GIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL-----AEFNMEQ 128 (509)
Q Consensus 54 g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~-----~~~g~~~ 128 (509)
-..+|++.++++++ .+.+++|+|+++|+..++.+++++|| .|+++.|.|..+...+ +..|.++
T Consensus 77 t~~~LE~~lA~l~g--------~~~~l~~~sG~~Ai~~al~al~~~GD----~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~ 144 (418)
T PLN02242 77 TVLNLGRQMAALEG--------TEAAYCTASGMSAISSVLLQLCSSGG----HVVASNTLYGGTHALLAHFLPRKCNITT 144 (418)
T ss_pred hHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCC----EEEEcCCcHHHHHHHHHHhhhhccCceE
Confidence 34788889998873 35678999999999999999999999 9999999998886655 3468887
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCC
Q psy13922 129 IGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEG 208 (509)
Q Consensus 129 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~ 208 (509)
+.++. .|++.+++++++. ++++|++++|+||||.+++ +++|+++|+++|++||+|++|..+.+..
T Consensus 145 ~~~d~-------~d~e~l~~~i~~~----~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~- 209 (418)
T PLN02242 145 TFVDI-------TDLEAVKKAVVPG----KTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP- 209 (418)
T ss_pred EEcCC-------CCHHHHHHhcCcC----CCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH-
Confidence 76653 2789999988752 4999999999999999975 8999999999999999999998765421
Q ss_pred CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe-eEEEeeecCCHHHHHHHHHhhhc---ccCcchhhhhcccc
Q psy13922 209 SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR-GGYSEVINLDPGVKAMLHKSISA---MLCPTVLALVSLPQ 284 (509)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr-~G~v~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~ 284 (509)
..+ + ..|+++|+||.+ |.+|.+ +||++ +++++++.+.+.... ..+.+..
T Consensus 210 ------~~~----g------~divv~S~SK~l-~g~g~~~gG~iv---~~~~li~~l~~~~~~~~~~~g~~~~------- 262 (418)
T PLN02242 210 ------ARL----G------ADVVVHSISKFI-SGGADIIAGAVC---GPAELVNSMMDLHHGALMLLGPTMN------- 262 (418)
T ss_pred ------HHc----C------CcEEEEeCcccc-CCCCCceEEEEE---cCHHHHHHHHHHhhhhhhccCCCCC-------
Confidence 111 1 146688999999 568877 58887 788999988866432 2232332
Q ss_pred ccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec
Q psy13922 285 LFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN 364 (509)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 364 (509)
.+.|...+... . .+...++.+.++++.+.+.|++. ++++.
T Consensus 263 ---------------------------~~~A~l~~~~l--------~----tl~~r~~~~~~~a~~la~~L~~~-~~~V~ 302 (418)
T PLN02242 263 ---------------------------PKVAFELSERL--------P----HLSLRMKEHCRRAMEYAKRMKEL-GLKVI 302 (418)
T ss_pred ---------------------------HHHHHHHHcCC--------C----cHHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence 22332222220 1 14445668888999999999988 45554
No 166
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.90 E-value=1.3e-20 Score=194.21 Aligned_cols=336 Identities=15% Similarity=0.143 Sum_probs=213.5
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
..+.+++++.+.+..... ....|+ +..++.+.+.+.+.+.+| .+.+++++|+|+++++..+++.+.....++++
T Consensus 32 ~~~~~~~a~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~ 105 (371)
T PRK13520 32 PHPIARKAHEMFLETNLG-DPGLFP---GTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKP 105 (371)
T ss_pred chHHHHHHHHHHHhcCCC-CcccCc---cHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCc
Confidence 346778888888876221 222232 334444445455544445 44567899999999999998887653211234
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.|++..+.|..+...++..|.+++.+|.+++ +.+|++.|++.+++ ++++|+++.++|+||.+.+ +++|.+
T Consensus 106 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~-----~~~~vi~~~~~~~tG~~~~---l~~I~~ 175 (371)
T PRK13520 106 NIVVPESAHFSFDKAADMLGVELRRAPLDDD--YRVDVKAVEDLIDD-----NTIGIVGIAGTTELGQVDP---IPELSK 175 (371)
T ss_pred eEEecCcchHHHHHHHHHcCceEEEecCCCC--CcCCHHHHHHHHhh-----CCEEEEEEcCCcCCcccCC---HHHHHH
Confidence 9999999999999999999999999987643 47899999999987 6888888888999999987 889999
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
+|+++|+++++|++|..+..........+ .+ . ....+.+.+ |.+|. |.+|.++|++++ .++++++.+.
T Consensus 176 l~~~~g~~livD~a~~~~~~~~~~~~~~~-~~----~--~~~vd~~~~-s~~K~--~~a~~~~G~~~~--~~~~~~~~l~ 243 (371)
T PRK13520 176 IALENGIFLHVDAAFGGFVIPFLDDPPNF-DF----S--LPGVDSITI-DPHKM--GLAPIPAGGILF--RDESYLDALA 243 (371)
T ss_pred HHHHcCCCEEEEecchhHHHHhhcCCCCc-cc----c--CCCCceEEE-CCccc--cCccCCceEEEE--cCHHHHHhhc
Confidence 99999999999999987642110000000 00 0 012234444 66785 457889998874 6777777664
Q ss_pred HhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHH
Q psy13922 266 KSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLK 345 (509)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (509)
... .+..... .+ ...++.......++..++. .-.....++.++...
T Consensus 244 ~~~-~~~~~~~-------------~~-----------~~~gt~~~~~~~~~~~al~---------~l~~~g~~~~~~~~~ 289 (371)
T PRK13520 244 VDT-PYLTSKK-------------QA-----------TLTGTRSGAGVAATYAVMK---------YLGREGYRKVVERCM 289 (371)
T ss_pred ccC-ccccCCC-------------Cc-----------ceEeeccChHHHHHHHHHh---------hhcHhHHHHHHHHHH
Confidence 211 1100000 00 0000000001222222221 000112566778888
Q ss_pred HHHHHHHHHHhcCCCCe-eccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCcccc
Q psy13922 346 QRAKMVADTFNSIEGMS-CNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHF 424 (509)
Q Consensus 346 ~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~ 424 (509)
++++++.+.|+++ |++ +..+..+++. +++. +..+ +...|.++||.+.++. .
T Consensus 290 ~~~~~l~~~L~~~-g~~~~~~~~~~~v~-~~~~---------------~~~~-v~~~L~~~gi~v~~~~---~------- 341 (371)
T PRK13520 290 ENTRWLAEELKER-GFEPVIEPVLNIVA-FDDP---------------NPDE-VREKLRERGWRVSVTR---C------- 341 (371)
T ss_pred HHHHHHHHHHHhC-CCEEecCCCceEEE-EecC---------------CHHH-HHHHHHHCCceeccCC---C-------
Confidence 8999999999988 887 5556666443 3333 1233 3455566799887532 1
Q ss_pred ccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHHH
Q psy13922 425 RQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 425 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~ 502 (509)
+. ++|+|+. +++++++.+++.|+++++
T Consensus 342 -----------------------------------------~~----------~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 342 -----------------------------------------PE----------ALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred -----------------------------------------CC----------EEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 12 7999987 799999999999988764
No 167
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=2e-21 Score=202.67 Aligned_cols=193 Identities=17% Similarity=0.233 Sum_probs=140.2
Q ss_pred CCCCCHHHHHHHHHHHh--cccCCCcc-----cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH
Q psy13922 23 DPRFPDDVKQRAQAVLD--GCRGQSVG-----SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL 95 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~--~~~~~~~~-----~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 95 (509)
...+|+.+++++.+.+. ........ .|.......++|+.+++++ | .++++|++|+|++++++.++.+
T Consensus 12 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----g--~~~~~v~~~~g~t~al~~~l~~ 85 (404)
T PRK14012 12 TTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI----G--ADPREIVFTSGATESDNLAIKG 85 (404)
T ss_pred CCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc----C--cCcCeEEEeCCHHHHHHHHHHH
Confidence 34568899999988886 21111110 0111123456778888777 3 5678899999999999999887
Q ss_pred hh----cCCCCCCCeEEEcCCCChhHHHHH---HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 96 LI----EDVDGKKPGVLIPIPQYPLYSASL---AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 96 l~----~~gd~~~~~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
+. ++|| .|+++.++|..+...+ +..|++++.++.+++ +.+|++.|++.+++ ++++|++++++
T Consensus 86 l~~~~~~~gd----~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~--g~~d~~~l~~~i~~-----~t~lv~~~~~~ 154 (404)
T PRK14012 86 AAHFYQKKGK----HIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSN--GIIDLEKLEAAMRD-----DTILVSIMHVN 154 (404)
T ss_pred HHHhhcCCCC----EEEEecCccHHHHHHHHHHHhCCCEEEEEccCCC--CcCCHHHHHHhcCC-----CCEEEEEECcC
Confidence 74 5676 9999999998775544 446999999988754 47899999999987 79999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 169 NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 169 NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
||||.+++ +++|.++|+++|+++|+|++++.... ...+... +.+++++ |++|.+ | |+ ++
T Consensus 155 n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~g~~-----~~~~~~~---------~~D~~~~-s~~K~~-g-p~-g~ 213 (404)
T PRK14012 155 NEIGVIQD---IAAIGEICRERGIIFHVDAAQSVGKV-----PIDLSKL---------KVDLMSF-SAHKIY-G-PK-GI 213 (404)
T ss_pred CCccchhh---HHHHHHHHHHcCCEEEEEcchhcCCc-----ccCcccC---------CCCEEEE-ehhhcc-C-CC-ce
Confidence 99999987 88999999999999999999875221 1111111 1225544 889988 6 44 57
Q ss_pred EEEee
Q psy13922 249 GYSEV 253 (509)
Q Consensus 249 G~v~~ 253 (509)
|++++
T Consensus 214 G~l~~ 218 (404)
T PRK14012 214 GALYV 218 (404)
T ss_pred EEEEE
Confidence 87763
No 168
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.89 E-value=1.6e-21 Score=203.22 Aligned_cols=320 Identities=12% Similarity=0.139 Sum_probs=203.1
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC----C
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV----D 101 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g----d 101 (509)
-+|.+.+++.++++.... ...... .+...++++.+.+..+ .+.+++++++++|+..+++....-. .
T Consensus 57 ~~p~v~~a~~~~~~~~~~--~~~~~~----~~~~~~l~~~l~~~~~----~~~~~~~~sGseA~e~a~klar~~~~~~~~ 126 (403)
T PRK05093 57 CHPALVKALKEQGEKLWH--ISNVFT----NEPALRLAKKLIDATF----AERVFFANSGAEANEAAFKLARRYACDRHG 126 (403)
T ss_pred CCHHHHHHHHHHHHhcCc--ccCccC----CHHHHHHHHHHHhhCC----CCEEEEeCchHHHHHHHHHHHHHHHhhcCC
Confidence 478999999998876211 111111 2223345555543322 3689999999999999998764321 1
Q ss_pred CCCCeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
..+..|+..+-+|++....+... +. +++.++ ..|++.+++.+.+ ++++|+++ |.
T Consensus 127 ~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~-----~~aaiiie-p~ 193 (403)
T PRK05093 127 PEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-------FNDLAAVKAVIDD-----HTCAVVVE-PI 193 (403)
T ss_pred CCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-------CCCHHHHHHHhcC-----CeEEEEEe-cc
Confidence 12447888888888865433222 11 112221 1278999988865 68888887 77
Q ss_pred CCCCCCC--CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCC
Q psy13922 169 NPTGQVL--TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGL 246 (509)
Q Consensus 169 NPtG~~~--s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Gl 246 (509)
||+|-.+ +++++++|.++|++||+++|+||+|.++.+++. ..+... .++.++ +.||||.+ | +|+
T Consensus 194 ~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~~--~~~~pd--------i~s~sK~l-~-~G~ 259 (403)
T PRK05093 194 QGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD--LFAYMH--YGVTPD--------ILTSAKAL-G-GGF 259 (403)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chhhhh--cCCCCC--------EEEecccc-c-CCc
Confidence 7777654 899999999999999999999999998877642 222111 111111 45899999 6 899
Q ss_pred eeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCC
Q psy13922 247 RGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQP 325 (509)
Q Consensus 247 r~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 325 (509)
|+||++ +++++++.+..... ...+.+.+ .|++....++
T Consensus 260 rig~vv---~~~~i~~~l~~~~~~~t~~~~~~----------------------------------~~~aa~a~L~---- 298 (403)
T PRK05093 260 PIGAML---TTAEIASHFKVGTHGSTYGGNPL----------------------------------ACAVAEAVFD---- 298 (403)
T ss_pred ceEEEE---EcHHHHhhcCCCCCCCCCCCCHH----------------------------------HHHHHHHHHH----
Confidence 999998 78999988865322 33344555 3333222211
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHH
Q psy13922 326 GEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIE---GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELL 402 (509)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll 402 (509)
... ....++.++++.+.+.+.|+++. ++....+.+|+++|+.+.-+. ...+.+++..++
T Consensus 299 -------~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~----------~~~~~~~~~~l~ 360 (403)
T PRK05093 299 -------IIN-TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY----------KGRARDFLNAAA 360 (403)
T ss_pred -------HHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc----------hhHHHHHHHHHH
Confidence 000 13345677888888888887751 121223456888887664110 012344554444
Q ss_pred hhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEE
Q psy13922 403 ERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTT 482 (509)
Q Consensus 403 ~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls 482 (509)
+.||.+.|+ +.+ ++|++
T Consensus 361 -~~Gv~v~~~------------------------------------------------------g~~--------~lRl~ 377 (403)
T PRK05093 361 -EEGVMVLVA------------------------------------------------------GPD--------VLRFA 377 (403)
T ss_pred -HCCeEEecC------------------------------------------------------CCC--------EEEEe
Confidence 569998862 112 89996
Q ss_pred --eecChHHHHHHHHHHHHHHHHH
Q psy13922 483 --ILPQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 483 --~~~~~~~i~~~~~~l~~~~~~~ 504 (509)
+..++++|++++++|.++++++
T Consensus 378 ~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 378 PSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4479999999999999998754
No 169
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.89 E-value=4.8e-21 Score=200.82 Aligned_cols=344 Identities=11% Similarity=0.047 Sum_probs=207.7
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
++.+.+++.+++.+. .+. +.+..+.+ ...++++.+....+.+.. +.+++++++++|+..+++....-.. +..
T Consensus 59 ~~~i~~a~~~~~~~~---~~~-~~~~~~~~-~~~~la~~l~~~~~~~~~-~~~~f~~sGsea~e~Alklar~~~~--r~~ 130 (425)
T PRK08088 59 HPKVVAAVEAQLKKL---SHT-CFQVLAYE-PYLELCEKMNQKVPGDFA-KKTLLVTTGSEAVENAVKIARAATK--RSG 130 (425)
T ss_pred CHHHHHHHHHHHhhC---CCc-cccccCCH-HHHHHHHHHHHhCCCCCC-CEEEEeCCcHHHHHHHHHHHHHHhC--CCe
Confidence 789999999999873 222 22212222 344777777665443322 4677777777888888877654321 336
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEE----------------EecCCCCCCCC--CHHHHHHHHHhhhccCCceEEEE-eCC
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIG----------------YYLDESKQWGL--PISELERSITEARKHCNPRAIVI-INP 167 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~----------------v~~~~~~~~~~--d~~~L~~~i~~~~~~~~~~~ivi-~~p 167 (509)
|+...++|++....+...+..... +|.+.. +... +++.|++.++......++++|++ +..
T Consensus 131 iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~ 209 (425)
T PRK08088 131 VIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQ 209 (425)
T ss_pred EEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhccCCCceEEEEECccc
Confidence 888899999987666654432111 111111 0111 14567777763111126778777 466
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe
Q psy13922 168 GNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR 247 (509)
Q Consensus 168 ~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr 247 (509)
+|++....+++.+++|.++|++||+++|+||+|.++.+.+ ...++... ++ +.-+.||||.+ | +|+|
T Consensus 210 ~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g--~~~~~~~~--~~--------~pdi~s~sK~l-~-~G~r 275 (425)
T PRK08088 210 GEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTG--TLFAMEQM--GV--------AADLTTFAKSI-A-GGFP 275 (425)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--chhHHhhc--CC--------CCCEEEEeccc-c-CCCc
Confidence 8887789999999999999999999999999999876543 12222111 11 22267999999 5 8999
Q ss_pred eEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCC
Q psy13922 248 GGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPG 326 (509)
Q Consensus 248 ~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 326 (509)
+||++ +++++++.+..... .+.+.+.+ .+++....++
T Consensus 276 ig~v~---~~~~~~~~~~~~~~~~t~~~~~~----------------------------------~~~a~~~~l~----- 313 (425)
T PRK08088 276 LAGVT---GRAEVMDAIAPGGLGGTYAGNPI----------------------------------ACAAALAVLK----- 313 (425)
T ss_pred ceeeE---ecHHHHhhcCCCCCCCCCCcCHH----------------------------------HHHHHHHHHH-----
Confidence 99998 79999998865433 33445555 3333333332
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 327 EPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
...++++ ++++++..+++++.+.+.+.+.|.+..+... |+++|+.+.-+... .......... +...+.+.|
T Consensus 314 ~~~~~~~---~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~~~~----~~p~~~~~~~-l~~~~~~~G 384 (425)
T PRK08088 314 VFEQENL---LQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDH----SKPNAKLTAQ-IVARARDKG 384 (425)
T ss_pred HHHhcCH---HHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecCCCC----CCCCHHHHHH-HHHHHHhCC
Confidence 0001222 4455555555555555544555443323233 78899877311000 0000001233 344555679
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-- 484 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-- 484 (509)
|.+.|+..|.. .+||+++
T Consensus 385 v~~~~~~~~~~------------------------------------------------------------~iRl~~~~~ 404 (425)
T PRK08088 385 LILLSCGPYYN------------------------------------------------------------VLRILVPLT 404 (425)
T ss_pred CEEecCCCCCC------------------------------------------------------------EEEEECCCC
Confidence 98887543322 7999988
Q ss_pred cChHHHHHHHHHHHHHHHHH
Q psy13922 485 PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~~ 504 (509)
.++++|++++++|.+++++.
T Consensus 405 ~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 405 IEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred cCHHHHHHHHHHHHHHHHhh
Confidence 68999999999999998753
No 170
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.89 E-value=2e-21 Score=203.84 Aligned_cols=206 Identities=13% Similarity=0.072 Sum_probs=143.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|++++.+++.+ .... +.+..+..+|++++++++. ..++|++++|+++|+..+++..+.-.. +++
T Consensus 66 ~p~v~~ai~~q~~~---~~~~-~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGseA~e~Alk~ar~~~g--r~~ 132 (423)
T TIGR00713 66 HPRVVEAVKEALER---GTSY-GAPTEAEILLAKEIISRVP-------SVEMVRFVNSGTEATMSAVRLARGYTG--RDK 132 (423)
T ss_pred CHHHHHHHHHHHHh---CCcC-CCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHHHHHHHHHHHHHHhhC--CCE
Confidence 78999999999987 2222 2356677899999998873 136899999999999999987654221 348
Q ss_pred EEEcCCCChhHHHHHHh---cCCEEEEEecCCC-------CCC---CCCHHHHHHHHHhhhccCCceEEEE-eCCCCCCC
Q psy13922 107 VLIPIPQYPLYSASLAE---FNMEQIGYYLDES-------KQW---GLPISELERSITEARKHCNPRAIVI-INPGNPTG 172 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~-------~~~---~~d~~~L~~~i~~~~~~~~~~~ivi-~~p~NPtG 172 (509)
|+...++|+++...+.. .+......+..+. ..+ ..|++.+++.+++.. .++++|++ +.|+| +|
T Consensus 133 ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~--~~~aavi~ep~~~~-~G 209 (423)
T TIGR00713 133 IIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYG--EEIAGVIVEPVAGN-MG 209 (423)
T ss_pred EEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcC--CcEEEEEEeCCCCC-CC
Confidence 99999999997654432 1111111111100 000 127899999887421 26788888 58888 78
Q ss_pred CCCC-HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 173 QVLT-KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 173 ~~~s-~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
.+++ ++++++|.++|++||+++|+||+|.+|.++ . .+ . .+. ....+ + +.+|||.+ | +|+|+||+
T Consensus 210 ~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g-~-~~-~-~~~-~~~~p-----D---i~t~sK~l-~-~G~pig~v 274 (423)
T TIGR00713 210 VVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVA-L-GG-A-QEY-FGVEP-----D---LTTLGKII-G-GGLPVGAF 274 (423)
T ss_pred CcCCCHHHHHHHHHHHHHhCCEEEEEccccccccC-c-ch-h-HHH-hCCCc-----c---hhhhhhhh-c-CCCceeee
Confidence 8777 699999999999999999999999988442 1 11 1 111 11111 1 23789999 6 89999999
Q ss_pred eeecCCHHHHHHHHH
Q psy13922 252 EVINLDPGVKAMLHK 266 (509)
Q Consensus 252 ~~~~~~~~~~~~l~~ 266 (509)
+ .++++++.+..
T Consensus 275 ~---~~~~i~~~~~~ 286 (423)
T TIGR00713 275 G---GRREIMERLAP 286 (423)
T ss_pred e---EHHHHHHhhCc
Confidence 8 78899998863
No 171
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.89 E-value=4.5e-20 Score=191.02 Aligned_cols=195 Identities=16% Similarity=0.210 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeE
Q psy13922 28 DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGV 107 (509)
Q Consensus 28 ~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~V 107 (509)
+.+.+.+...........+.+|+.+ -..++++.+++++ | .+++++|+|+++|+..++.++.++|| +|
T Consensus 37 ~~~~~~~~~~~~~~~~~~y~r~~~p-~~~~le~~la~l~----g----~~~~v~~ssG~~Ai~~al~al~~~Gd----~V 103 (390)
T PRK08133 37 ESAAEAAARFAGEEPGNIYSRFTNP-TVTMFQERLAALE----G----AEACVATASGMAAILAVVMALLQAGD----HV 103 (390)
T ss_pred CCHHHHHHhhcCCcCCceeECCCCh-HHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCC----EE
Confidence 3455555444333222233444432 3467888888887 2 35689999999999999999999998 99
Q ss_pred EEcCCCChhHHH----HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 108 LIPIPQYPLYSA----SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 108 lv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
+++.+.|.+... .+...|++++.++.+ |++.+++.+++ ++++|++++|+||+|.+.+ +++|
T Consensus 104 i~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-------d~~~l~~~i~~-----~tklV~ie~p~NptG~v~d---l~~I 168 (390)
T PRK08133 104 VSSRSLFGSTVSLFEKIFARFGIETTFVDLT-------DLDAWRAAVRP-----NTKLFFLETPSNPLTELAD---IAAL 168 (390)
T ss_pred EEccCcchhHHHHHHHHHHHcCcEEEEECCC-------CHHHHHHhcCc-----CCeEEEEECCCCCCCCcCC---HHHH
Confidence 999998876543 456789999988753 68899988876 7999999999999999987 8999
Q ss_pred HHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHH
Q psy13922 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAM 263 (509)
Q Consensus 184 ~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~ 263 (509)
+++|+++|+++|+|++|...... .++ . .+. .++++|+||.+ |.+|.++|++++ .++++++.
T Consensus 169 ~~la~~~gi~livD~t~~~~~~~-----~pl-~----~g~------Divv~S~sK~~-~g~g~~~GG~vv--~~~~~~~~ 229 (390)
T PRK08133 169 AEIAHAAGALLVVDNCFCTPALQ-----QPL-K----LGA------DVVIHSATKYL-DGQGRVLGGAVV--GSKELMEE 229 (390)
T ss_pred HHHHHHcCCEEEEECCCcccccC-----Cch-h----hCC------cEEEeecceee-cCCcceEeEEEE--cCHHHHHH
Confidence 99999999999999998654322 111 1 111 35578999999 568888755443 67777777
Q ss_pred HHHhhh
Q psy13922 264 LHKSIS 269 (509)
Q Consensus 264 l~~~~~ 269 (509)
+.....
T Consensus 230 ~~~~~~ 235 (390)
T PRK08133 230 VFGFLR 235 (390)
T ss_pred HHHHHH
Confidence 664433
No 172
>PRK06460 hypothetical protein; Provisional
Probab=99.88 E-value=2.7e-20 Score=191.69 Aligned_cols=217 Identities=12% Similarity=0.140 Sum_probs=153.5
Q ss_pred cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC----ChhHHHHHHhcCCEE
Q psy13922 53 PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ----YPLYSASLAEFNMEQ 128 (509)
Q Consensus 53 ~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~----y~~~~~~~~~~g~~~ 128 (509)
....+|+++++++++ . ...+++ +++++++..++.+++++|| +|+++.|. |..+...++..|+++
T Consensus 45 p~~~~L~~~lA~l~g------~-~~~v~~-~sG~~ai~~~l~al~~~Gd----~Vl~~~~~~~~ty~~~~~~~~~~G~~v 112 (376)
T PRK06460 45 PTVLELTKKIVELEN------A-EMGVAF-SSGMGAISTTALALLKPGN----SVLVHRDMFGRSYRFFTDYLKNWGVNV 112 (376)
T ss_pred ccHHHHHHHHHHHhC------C-CcEEEe-CCHHHHHHHHHHHHhCCCC----EEEEecCCcCcHHHHHHHHHHhhCcEE
Confidence 456889999999983 1 234555 4456899999999999998 99998764 445567778889998
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCC
Q psy13922 129 IGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEG 208 (509)
Q Consensus 129 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~ 208 (509)
..++.++ .+.+++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+..
T Consensus 113 ~~~~~~~-------~~~l~~~~~~-----~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~~--- 174 (376)
T PRK06460 113 DASNPGS-------DNIIEKAKSK-----RYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPIN--- 174 (376)
T ss_pred EEECCCC-------HHHHHHhcCC-----CceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCcccc---
Confidence 8876542 2334443333 7999999999999999999 56788899999999999999975321
Q ss_pred CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCC
Q psy13922 209 SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDD 288 (509)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 288 (509)
..++ + ....++++|+||.++|..|+++||++ +++++++++.+.+..+......
T Consensus 175 --~~~l-----~------~~~divv~S~sK~l~G~~~~~~G~~~---~~~~l~~~l~~~~~~~g~~~~~----------- 227 (376)
T PRK06460 175 --QKPL-----E------LGADIVVHSASKFLAGHNDVIAGLAA---GYGKLLNVIDQMRRTLGTSLDP----------- 227 (376)
T ss_pred --CChh-----h------cCCCEEEeecceeccCCCCceEEEEe---cCHHHHHHHHHHHHhcCCCCCH-----------
Confidence 1111 0 01257788999999654457899998 7899999998766533221111
Q ss_pred CCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy13922 289 PRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMS 362 (509)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 362 (509)
..+.. ++ +..++++..++.+.++++.+.+.|++.|.+.
T Consensus 228 ------------------------~~a~~-~l-----------~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~ 265 (376)
T PRK06460 228 ------------------------HAAYL-TL-----------RGIKTLKIRMDVINRNAEQIAEFLEGHPKVV 265 (376)
T ss_pred ------------------------HHHHH-HH-----------hchhhHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 11111 10 1223467778888999999999999877654
No 173
>KOG1412|consensus
Probab=99.88 E-value=9.2e-21 Score=179.14 Aligned_cols=320 Identities=18% Similarity=0.237 Sum_probs=234.6
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcE--EEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDV--ILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|++-|.|.++-...-.+ ......|-|..|++.++.+.++.+-......+..+.+ +-+-++|.|+......|..-
T Consensus 45 g~PWvLPvVk~~e~~i~~d--~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~ 122 (410)
T KOG1412|consen 45 GKPWVLPVVKKAEKKIAND--QSLNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATF 122 (410)
T ss_pred CCeeEehhhhhhhhhccCc--hhccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHh
Confidence 6777777776665554444 1233349999999999999999886443333444554 33456677887777666432
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCC-EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceE-EEEeCC-CCCCCCCCC
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNM-EQIGYYLDESKQWGLPISELERSITEARKHCNPRA-IVIINP-GNPTGQVLT 176 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~-ivi~~p-~NPtG~~~s 176 (509)
-. +.+|.++.|+|..+...++..|+ ++..++..+..+-.+|++.+...++.. ..+. ++++.+ |||||.-.+
T Consensus 123 ~~--~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A----Pe~si~iLhaCAhNPTGmDPT 196 (410)
T KOG1412|consen 123 YN--KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA----PEGSIIILHACAHNPTGMDPT 196 (410)
T ss_pred cc--cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC----CCCcEEeeeccccCCCCCCCC
Confidence 11 23799999999999999999994 566666655556689999999999885 3444 445655 999999999
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccH-HHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeec
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSF-KKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN 255 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~ 255 (509)
+|+|.+|++..++.+.+.+.|-+|.+|.-++. ...+. ..+..+- +..++++-||+|.+ |+.+-|+|-+.++.
T Consensus 197 ~EQW~qia~vik~k~lf~fFDiAYQGfASGD~-~~DawAiR~fV~~-----g~e~fv~QSFaKNf-GlYneRvGnltvv~ 269 (410)
T KOG1412|consen 197 REQWKQIADVIKSKNLFPFFDIAYQGFASGDL-DADAWAIRYFVEQ-----GFELFVCQSFAKNF-GLYNERVGNLTVVV 269 (410)
T ss_pred HHHHHHHHHHHHhcCceeeeehhhcccccCCc-cccHHHHHHHHhc-----CCeEEEEhhhhhhc-ccccccccceEEEe
Confidence 99999999999999999999999999987642 22222 1222222 33488899999999 99999999999888
Q ss_pred CCHHHHHHHHHh-----hhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 256 LDPGVKAMLHKS-----ISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 256 ~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
.++..+..+..- ++.+++|+..|..++..+|..|++ .
T Consensus 270 ~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~l--------------------------------------r 311 (410)
T KOG1412|consen 270 NNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPEL--------------------------------------R 311 (410)
T ss_pred cChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHH--------------------------------------H
Confidence 888877666432 336778888855554444444332 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCe
Q psy13922 331 EQFSREKQSVLDSLKQRAKMVADTFNSI--EG-MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGI 407 (509)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI 407 (509)
++|...+..+-.++++.|..|.+.|..+ || |..+..+.|+|.+- |+++.. +..+.+.+.|
T Consensus 312 e~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyT---------------GLtp~q--V~~li~~h~v 374 (410)
T KOG1412|consen 312 EQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYT---------------GLTPAQ--VDHLIENHKV 374 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeec---------------CCCHHH--HHHHHHhceE
Confidence 7777778899999999999999999886 55 55667788999873 555554 6889999999
Q ss_pred EEec
Q psy13922 408 CIVP 411 (509)
Q Consensus 408 ~v~p 411 (509)
++.+
T Consensus 375 yLl~ 378 (410)
T KOG1412|consen 375 YLLS 378 (410)
T ss_pred EEec
Confidence 9985
No 174
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.88 E-value=6.6e-21 Score=198.65 Aligned_cols=329 Identities=13% Similarity=0.161 Sum_probs=207.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC----CC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV----DG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g----d~ 102 (509)
.|.|.+++.+++.+..... ..|. .....++.+.++++. ..+.+++++++++|+..+++...... ..
T Consensus 57 ~p~v~~A~~~~~~~~~~~~-~~~~-~~~~~~la~~l~~~~--------~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~ 126 (406)
T PRK12381 57 HPALREALNEQASKFWHTG-NGYT-NEPVLRLAKKLIDAT--------FADRVFFCNSGAEANEAALKLARKYAHDRYGS 126 (406)
T ss_pred CHHHHHHHHHHHhhccccc-CccC-CHHHHHHHHHHHhhC--------CCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCC
Confidence 6899999999988632111 1132 111234555555432 24699999999999999999875321 11
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCEEE-E---EecCC--CCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCC-
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNMEQI-G---YYLDE--SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVL- 175 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~~~-~---v~~~~--~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~- 175 (509)
.+..|+....+|++....+...+.... . .+..+ ..-...|++.+++.+.+ ++++|++ .|.|++|-++
T Consensus 127 ~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~aavii-EPv~~~gg~~~ 200 (406)
T PRK12381 127 HKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD-----QTCAVIV-EPIQGEGGVIP 200 (406)
T ss_pred CCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC-----CeeEEEE-eCCcCCCCCcC
Confidence 245799999999998755444332110 0 01100 00012478999988865 6888777 5889998644
Q ss_pred -CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 176 -TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 176 -s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
+++.+++|.++|++||+++|+||+|.++.+++. +.+... .++.+ + +.|+||.+ | +|+|+||++
T Consensus 201 ~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~--~~~~~~--~~v~p-----D---i~t~sK~l-~-gG~~ig~~~-- 264 (406)
T PRK12381 201 ADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE--LYAYMH--YGVTP-----D---VLTTAKAL-G-GGFPIGAML-- 264 (406)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc--hhhhHh--hCCCC-----C---EEEehhhh-h-CCCceEEEE--
Confidence 799999999999999999999999988866542 222111 11211 1 34889999 5 899999998
Q ss_pred cCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHH
Q psy13922 255 NLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQF 333 (509)
Q Consensus 255 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 333 (509)
.++++++.+..... .+.+.+.+++.+ +.+++..+ .
T Consensus 265 -~~~~~~~~~~~~~~~~t~~~~pl~~aa------------------------------a~a~l~~l-~------------ 300 (406)
T PRK12381 265 -TTEKCASVMTVGTHGTTYGGNPLASAV------------------------------AGKVLELI-N------------ 300 (406)
T ss_pred -EcHHHHhhcCCCCCCCCCCCCHHHHHH------------------------------HHHHHHHH-h------------
Confidence 78899988865332 233445552222 22222221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-CCee-c-cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 334 SREKQSVLDSLKQRAKMVADTFNSIE-GMSC-N-PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 334 ~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
...+++.++++.+++.+.|+++. ...+ . ....|.++++.+..+. ......+...+.++||.+.
T Consensus 301 ---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~-----------~~~~~~~~~~l~~~Gv~v~ 366 (406)
T PRK12381 301 ---TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEY-----------AGKAKQISQEAAKAGVMVL 366 (406)
T ss_pred ---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCch-----------hhHHHHHHHHHHHCCcEEe
Confidence 23456777777777777777651 1221 1 2234677776654211 0011224566777899987
Q ss_pred cCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChH
Q psy13922 411 PGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPE 488 (509)
Q Consensus 411 pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~ 488 (509)
++. +. ++|+++. .+++
T Consensus 367 ~~g----------------------------------------------------~~----------~lRl~p~~~~t~~ 384 (406)
T PRK12381 367 IAG----------------------------------------------------PN----------VVRFAPALNISEE 384 (406)
T ss_pred eCC----------------------------------------------------CC----------EEEEeCCccCCHH
Confidence 521 11 7888766 8999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy13922 489 KLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 489 ~i~~~~~~l~~~~~~~~~~ 507 (509)
+|++++++|.++++++.++
T Consensus 385 ~i~~~~~~l~~~l~~~~~~ 403 (406)
T PRK12381 385 EITTGLDRFARACERFVSR 403 (406)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999887654
No 175
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.88 E-value=3.6e-20 Score=190.98 Aligned_cols=179 Identities=16% Similarity=0.184 Sum_probs=139.5
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh-
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE- 123 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~- 123 (509)
.+++|+.+. ...|++.++++.+ .+++++|+|+++|+..++.+++++|| +|+++.|+|.+....+..
T Consensus 44 ~Y~R~~~p~-~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all~~GD----~Vl~~~p~y~~~~~~~~~~ 110 (382)
T TIGR02080 44 DYSRSGNPT-RDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALLGPDD----LLVAPHDCYGGTYRLLNAL 110 (382)
T ss_pred cccCCCCch-HHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCC----EEEEcCCCcHHHHHHHHHH
Confidence 466676543 3789999999873 36899999999999999999999998 999999999975544332
Q ss_pred ---cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 124 ---FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 124 ---~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
.+.++..++ ..|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|
T Consensus 111 ~~~~~~~v~~~d-------~~d~~~l~~ai~~-----~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~ 175 (382)
T TIGR02080 111 AKKGCFRVLFVD-------QGDEQALRAALAQ-----KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTF 175 (382)
T ss_pred HhhcCeEEEEEC-------CCCHHHHHHhcCc-----CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCC
Confidence 345555443 2378999999876 7999999999999999988 778888999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
..+... .++ . .+. .++++|+||.+.|.+|++.|++++ .++++++++...+.
T Consensus 176 ~~~~~~-----~pl-~----~ga------Divv~S~sK~l~G~~~~~~G~i~~--~~~~~~~~l~~~~~ 226 (382)
T TIGR02080 176 LSPALQ-----NPL-A----LGA------DLVLHSCTKYLNGHSDVIAGAVIA--KDPQVAEELAWWAN 226 (382)
T ss_pred cccccC-----Cch-h----hCC------CEEEeecceeccCCCCceeEEEEe--CCHHHHHHHHHHHH
Confidence 765432 121 1 111 366789999996678899999863 67888888876655
No 176
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=7.3e-20 Score=188.83 Aligned_cols=225 Identities=13% Similarity=0.154 Sum_probs=164.0
Q ss_pred CCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH-
Q psy13922 44 QSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA- 122 (509)
Q Consensus 44 ~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~- 122 (509)
..+++|+.+. ...|++++|++++ .+++++++|+++++..++.+++++|| +|+++.|+|.+....+.
T Consensus 44 ~~Y~R~~~pt-~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD----~Vl~~~~~y~~~~~~~~~ 110 (386)
T PRK08045 44 HDYSRRGNPT-RDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGD----LLVAPHDCYGGSYRLFDS 110 (386)
T ss_pred ceeeCCCCcc-HHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCC----EEEEcCCCcHHHHHHHHH
Confidence 3466676554 4789999999873 24699999999999999999999998 99999999996444333
Q ss_pred ---hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 123 ---EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 123 ---~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
..|.++..++ ..|++.+++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++
T Consensus 111 ~~~~~gi~v~~vd-------~~d~e~l~~~l~~-----~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDea 175 (386)
T PRK08045 111 LAKRGCYRVLFVD-------QGDEQALRAALAE-----KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNT 175 (386)
T ss_pred HHhhCCeEEEEeC-------CCCHHHHHHhccc-----CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECC
Confidence 2344665543 3488999998876 7999999999999999998 78888889999999999999
Q ss_pred CCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhc-ccCcchhh
Q psy13922 200 YQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISA-MLCPTVLA 278 (509)
Q Consensus 200 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~-~~~~~~~~ 278 (509)
|...... .++ .. ..+ ++++|+||.++|.++++.|+++. .++++.+.+...... ..+.+..
T Consensus 176 y~~~~~~-----~pl-~~---------gaD-ivv~S~tK~l~G~~d~~~G~vi~--~~~~~~~~l~~~~~~~g~~~~p~- 236 (386)
T PRK08045 176 FLSPALQ-----NPL-AL---------GAD-LVLHSCTKYLNGHSDVVAGVVIA--KDPDVVTELAWWANNIGVTGGAF- 236 (386)
T ss_pred CCccccC-----Cch-hh---------CCC-EEEeecceeccCCCCceeEEEEe--CcHHHHHHHHHHHHhcCCCCCHH-
Confidence 9764321 122 11 112 56889999997778889999863 578888888755442 2233333
Q ss_pred hhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy13922 279 LVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSI 358 (509)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 358 (509)
.+..+...++ .+....+...+++..+.+.|+..
T Consensus 237 ---------------------------------~~~l~~rgl~--------------tl~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 237 ---------------------------------DSYLLLRGLR--------------TLVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred ---------------------------------HHHHHHhhhc--------------cHHHHHHHHHHHHHHHHHHHHcC
Confidence 1222111111 16667778888888889999887
Q ss_pred CCCe
Q psy13922 359 EGMS 362 (509)
Q Consensus 359 ~g~~ 362 (509)
|.+.
T Consensus 270 p~v~ 273 (386)
T PRK08045 270 PLVK 273 (386)
T ss_pred CCEe
Confidence 7654
No 177
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=7.9e-20 Score=188.53 Aligned_cols=326 Identities=13% Similarity=0.151 Sum_probs=202.2
Q ss_pred HHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc------CCCC
Q psy13922 29 DVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE------DVDG 102 (509)
Q Consensus 29 ~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~gd~ 102 (509)
.+.+++...+.... +....|+ |..++.+.+.+.+.+.+| ++++++++++|+++++..++.++.. +|+
T Consensus 35 ~~~~a~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~la~~~g--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~- 107 (373)
T TIGR03812 35 IAVKAYDMFIETNL-GDPGLFP---GTKKIEEEVVGSLGNLLH--LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTP- 107 (373)
T ss_pred HHHHHHHHHhhcCC-CCcccCc---cHHHHHHHHHHHHHHHhC--CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCc-
Confidence 45667766655422 2222243 223333444444444435 4567888999999999888777652 445
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
.|+++.++|.++...++..|++++.++.++ ++.+|++.+++.+++ ++..+++..|+||||...+ +++
T Consensus 108 ---~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~l~~-----~~~~vv~~~~~~~tG~~~~---~~~ 174 (373)
T TIGR03812 108 ---NIIVPESAHFSFEKAAEMLGLELRYAPLDE--DYTVDVKDVEDLIDD-----NTIGIVGIAGTTELGQIDD---IEE 174 (373)
T ss_pred ---EEEECCcchHHHHHHHHHcCCeEEEEeeCC--CCCcCHHHHHHHHhh-----CcEEEEEECCCCCCCccCC---HHH
Confidence 999999999999999999999999999864 357899999999977 5655555558999999976 888
Q ss_pred HHHHHHHCCcEEEEcccCCcccccCC---CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 183 IIKFAHREKLFLFADEVYQDNVYAEG---SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
|.++|+++|+++|+|++|..+...-. .....+ .+ .. ...+++.+ |.+| + |+++.|.|++++ .+++
T Consensus 175 i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~-d~--~~----~~~d~~~~-s~~K-~-~~~~~~~G~~~~--~~~~ 242 (373)
T TIGR03812 175 LSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPF-DF--SL----PGVQSITI-DPHK-M-GLSPIPAGGILF--RSKS 242 (373)
T ss_pred HHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCc-cc--cC----CCCCEEEE-Cccc-c-CCCcCCceEEEE--eCHH
Confidence 89999999999999999986542100 000000 00 00 01224433 6789 5 567888887764 6788
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+... ..+.....- ..+ .|+.......++..+++ + -..+.+++
T Consensus 243 ~~~~l~~~-~~~~~~~~~-----------~~~-------------~gt~~~~~~~~~~~~l~--------~-l~~~g~~~ 288 (373)
T TIGR03812 243 YLKYLSVD-APYLTVKKQ-----------ATI-------------TGTRSGASAAATYAVIK--------Y-LGREGYRK 288 (373)
T ss_pred HHhhhccc-CcccCCCCC-----------cce-------------EeechhHHHHHHHHHHH--------H-hCHHHHHH
Confidence 88776421 111111000 000 00000002222222221 0 01123567
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCe-eccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMS-CNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
..+.+.++++++.+.|+++ ++. +..+..++.. +.++ . ... +...|.++||.+.++. .
T Consensus 289 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~-~~~~--~-------------~~~-v~~~L~~~gi~v~~~~---~- 346 (373)
T TIGR03812 289 IVAECMENTRYLVEELKKI-GFEPVIEPVLNIVA-FEVD--D-------------PEE-VRKKLRDRGWYVSVTR---C- 346 (373)
T ss_pred HHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEE-EEeC--C-------------HHH-HHHHHHHCCceeccCC---C-
Confidence 7888999999999999998 554 4455555443 3332 1 223 4455666799987532 1
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEK 496 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~ 496 (509)
+. ++|+++. +++++++.+++.
T Consensus 347 -----------------------------------------------~~----------~iRis~~~~~t~edid~l~~~ 369 (373)
T TIGR03812 347 -----------------------------------------------PK----------ALRIVVMPHVTREHIEEFLED 369 (373)
T ss_pred -----------------------------------------------CC----------EEEEEEECCCCHHHHHHHHHH
Confidence 22 8999988 799999999998
Q ss_pred HHH
Q psy13922 497 FRE 499 (509)
Q Consensus 497 l~~ 499 (509)
|++
T Consensus 370 L~~ 372 (373)
T TIGR03812 370 LKE 372 (373)
T ss_pred Hhh
Confidence 875
No 178
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=9.3e-20 Score=189.12 Aligned_cols=223 Identities=17% Similarity=0.194 Sum_probs=159.0
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhH----HHHH
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY----SASL 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~----~~~~ 121 (509)
+.+|+.+. ...|++.+++++ | ..+. ++++++++++.+++.++.++|| +|+++.|+|.+. ...+
T Consensus 54 y~R~~~p~-~~~Le~~lA~l~----g---~~~~-v~~~sG~~Ai~~~l~all~pGD----~Vvv~~p~Y~~t~~~~~~~~ 120 (405)
T PRK08776 54 YTRSGNPT-RDLLGEALAELE----G---GAGG-VITATGMGAINLVLNALLQPGD----TLVVPHDAYGGSWRLFNALA 120 (405)
T ss_pred ccCCCChH-HHHHHHHHHHHh----C---CCce-EEEcCHHHHHHHHHHHHhCCCC----EEEEccCCchHHHHHHHHHH
Confidence 44444333 366778888776 3 1234 5555567999999999999998 999999999873 3445
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
+..|.+++.++. .|++.+++.+++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.
T Consensus 121 ~~~g~~v~~v~~-------~d~~~l~~~i~~-----~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a 185 (405)
T PRK08776 121 KKGHFALITADL-------TDPRSLADALAQ-----SPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFL 185 (405)
T ss_pred HhcCcEEEEECC-------CCHHHHHHhcCc-----CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCc
Confidence 566888888764 378999988876 7999999999999999855 8999999999999999999997
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhc-ccCcchhhhh
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISA-MLCPTVLALV 280 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~ 280 (509)
.... +.++ . .+ . -++++|.||.++|.+++..|+++. .++++.+++...... ....+.+
T Consensus 186 ~~~~-----~~pl-~----~g-----a-Divv~S~tK~l~g~~~~~~G~vv~--~~~~l~~~l~~~~~~~g~~~s~~--- 244 (405)
T PRK08776 186 SPAL-----QKPL-E----FG-----A-DLVLHSTTKYINGHSDVVGGAVVA--RDAELHQQLVWWANALGLTGSPF--- 244 (405)
T ss_pred cccc-----CCcc-c----cc-----C-CEEEecCceeecCCCCceEEEEEe--CCHHHHHHHHHHHHhcCCCCCHH---
Confidence 5321 1222 1 11 1 256779999996555688898863 678888888655442 2223333
Q ss_pred ccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy13922 281 SLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEG 360 (509)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 360 (509)
...++. +..++++...+...++...+.+.|++.|.
T Consensus 245 -------------------------------~a~l~~--------------~gl~tl~~r~~~~~~na~~la~~L~~~p~ 279 (405)
T PRK08776 245 -------------------------------DAFLTL--------------RGLRTLDARLRVHQENADAIAALLDGHAA 279 (405)
T ss_pred -------------------------------HHHHHH--------------hhhCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 111111 12334778888889999999999998776
Q ss_pred Ce
Q psy13922 361 MS 362 (509)
Q Consensus 361 ~~ 362 (509)
+.
T Consensus 280 v~ 281 (405)
T PRK08776 280 VN 281 (405)
T ss_pred ee
Confidence 54
No 179
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.88 E-value=8.3e-21 Score=194.48 Aligned_cols=310 Identities=17% Similarity=0.159 Sum_probs=192.1
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCcc---cCCCC--cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVG---SYTDS--PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~---~Y~~~--~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 97 (509)
...+|+.+++++.+.+......... .++.. .-..++|+.+++++ | .++++|++|+|++++++.++..+.
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~v~~~~g~t~a~~~~l~~l~ 80 (353)
T TIGR03235 7 TTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL----G--ADTEEVIFTSGATESNNLAILGLA 80 (353)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCCHHHHHHHHHHHHH
Confidence 3456889999998888652111111 01111 12356777777777 3 567899999999999999999887
Q ss_pred cCCCCCC-CeEEEcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 98 EDVDGKK-PGVLIPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 98 ~~gd~~~-~~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
..+++++ +.|++....|..+.. .++..|++++.++.+++ +.+|++.+++.+++ ++++|++++++||||.
T Consensus 81 ~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~l~~~l~~-----~~~lv~~~~~~n~tG~ 153 (353)
T TIGR03235 81 RAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDES--GRIDVDELADAIRP-----DTLLVSIMHVNNETGS 153 (353)
T ss_pred HhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCC--CcCCHHHHHHhCCC-----CCEEEEEEcccCCcee
Confidence 5432122 478888777766543 34567999999988753 47899999999876 7899999999999999
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
+++ +++|.++|+++|+++|+|++++..... ..+.. . ..+++++ |.+|.+ |++| +|++++
T Consensus 154 ~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~~-----~~~~~----~-----~~D~~~~-s~~K~~-gp~g--~g~l~~ 212 (353)
T TIGR03235 154 IQP---IREIAEVLEAHEAFFHVDAAQVVGKIT-----VDLSA----D-----RIDLISC-SGHKIY-GPKG--IGALVI 212 (353)
T ss_pred ccC---HHHHHHHHHHcCCEEEEEchhhcCCcc-----ccccc----c-----CCCEEEe-ehhhcC-CCCc--eEEEEE
Confidence 988 899999999999999999998753221 11111 0 2335544 779988 7666 677763
Q ss_pred ecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHH
Q psy13922 254 INLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQF 333 (509)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 333 (509)
+++...... ......+... .. .+..++.......++..+++ ..
T Consensus 213 ---~~~~~~~~~-~~~~~~~~~~------~~-----------------~~~~gt~~~~~~~al~~al~----------~~ 255 (353)
T TIGR03235 213 ---RKRGKPKAP-LKPIMFGGGQ------ER-----------------GLRPGTLPVHLIVGMGEAAE----------IA 255 (353)
T ss_pred ---ccCcccccc-cCceeeCCCC------cC-----------------ccccCCCChHHHHHHHHHHH----------HH
Confidence 343322110 0000000000 00 00111111113333333332 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC-ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecC
Q psy13922 334 SREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ-GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPG 412 (509)
Q Consensus 334 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg 412 (509)
.+..+..+++++++.+.+.+.|.+ +|+++..+. .....++.+.+| ++ +.++ +...|++ +|.+.+|
T Consensus 256 ~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~----------~~-~~~~-v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 256 RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSID----------GV-NSEA-LIVNLRA-DAAVSTG 321 (353)
T ss_pred HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeC----------Cc-CHHH-HHHHHhC-CeEEEch
Confidence 223677888999999999999988 588876332 221112222211 22 1233 4566665 8999999
Q ss_pred CCCCC
Q psy13922 413 AGFGQ 417 (509)
Q Consensus 413 ~~f~~ 417 (509)
..|+.
T Consensus 322 ~~~~~ 326 (353)
T TIGR03235 322 SACSS 326 (353)
T ss_pred hhcCC
Confidence 98876
No 180
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=6.9e-20 Score=191.88 Aligned_cols=301 Identities=15% Similarity=0.134 Sum_probs=184.0
Q ss_pred CCCCCCHHHHHHHHHHHhccc--CCCcccC-CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCR--GQSVGSY-TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~--~~~~~~Y-~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.+.+|+.|++++...+.... +.....| ....-...+.+...+.+.+.+|. +..+|++++| ++++..++.++++
T Consensus 33 ~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~i~~~sg-t~al~~~l~~l~~ 109 (416)
T PRK00011 33 SENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--EYANVQPHSG-SQANAAVYFALLK 109 (416)
T ss_pred ccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceeeecCCc-hHHHHHHHHHhcC
Confidence 444478999999877654311 1111112 11111222322122244444453 3455766665 6799999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHH-----HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSA-----SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~-----~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
+|| +|+++.|+|.++.. .+...|++++.++.+++ ++.+|++.+++.++.. ++++|++++++|+ .
T Consensus 110 ~gd----~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~----~~k~v~~~~~~~~--~ 178 (416)
T PRK00011 110 PGD----TILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEE-TGLIDYDEVEKLALEH----KPKLIIAGASAYS--R 178 (416)
T ss_pred CCC----EEEEeccccCCccccccccccccceeeEeecCcCcc-cCCcCHHHHHHHHHhc----CCCEEEECCCcCC--C
Confidence 998 99999999976532 12344678888877643 4689999999999753 6889888766554 3
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
..+ +++|.++|+++|+++|+|++|.......+.....+. .. .++++|+||.+ +|.|+||++.
T Consensus 179 ~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----------~~-di~~~S~~K~l---~g~~gg~i~~ 240 (416)
T PRK00011 179 PID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----------HA-DVVTTTTHKTL---RGPRGGLILT 240 (416)
T ss_pred ccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-----------CC-cEEEecCCcCC---CCCCceEEEe
Confidence 434 899999999999999999998532211110111110 11 24577999976 5789999983
Q ss_pred ecCCHHHHHHHHHhhhccc-C-cchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 254 INLDPGVKAMLHKSISAML-C-PTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
.++++++.+......+. + +... ...++..++. .
T Consensus 241 --~~~~~~~~l~~~~~~~~~~~~~~~----------------------------------~~aa~~~a~~---------~ 275 (416)
T PRK00011 241 --NDEELAKKINSAVFPGIQGGPLMH----------------------------------VIAAKAVAFK---------E 275 (416)
T ss_pred --CCHHHHHHHHHHhCccccCCccHH----------------------------------HHHHHHHHHH---------H
Confidence 45789998876554221 1 1111 1111111110 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 332 QFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
...+++++.++.++++++++.+.|++. |+++.+ ...+.++|+.+.- . ++ +... +...|+++||.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~-~---------~~-~~~~-~~~~L~~~GI~v~ 342 (416)
T PRK00011 276 ALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRS-K---------GL-TGKE-AEAALEEANITVN 342 (416)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcc-c---------CC-CHHH-HHHHHHHcCcEEc
Confidence 111235778888999999999999987 777653 1224777776641 0 11 1233 4667788999997
Q ss_pred cC
Q psy13922 411 PG 412 (509)
Q Consensus 411 pg 412 (509)
.+
T Consensus 343 ~~ 344 (416)
T PRK00011 343 KN 344 (416)
T ss_pred cC
Confidence 54
No 181
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.87 E-value=7e-20 Score=188.07 Aligned_cols=175 Identities=17% Similarity=0.201 Sum_probs=131.3
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH---
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL--- 121 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~--- 121 (509)
.+++|+. .....|++++++++ .+++++++++++++..++.+++++|| +|+++.|.|.++...+
T Consensus 44 ~y~ry~~-p~~~~Le~~lA~l~---------~~~~v~~~sG~~Ai~~~l~all~~Gd----~Vl~~~~~y~~~~~~~~~~ 109 (366)
T PRK07582 44 TYGRASN-PTWRALEAALGELE---------GAEALVFPSGMAAITAVLRALLRPGD----TVVVPADGYYQVRALAREY 109 (366)
T ss_pred eeECCCC-ccHHHHHHHHHHHc---------CCCEEEECCHHHHHHHHHHHhcCCCC----EEEEeCCCcHhHHHHHHHH
Confidence 3565654 45688999999886 13456666667899999999999998 9999999998876644
Q ss_pred -HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 122 -AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 122 -~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
...|++++.++.++. .+ .+.. ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|
T Consensus 110 l~~~G~~v~~v~~~~~------~~----~~~~-----~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~ 171 (366)
T PRK07582 110 LAPLGVTVREAPTAGM------AE----AALA-----GADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTT 171 (366)
T ss_pred HhcCeEEEEEECCCCh------HH----Hhcc-----CceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCC
Confidence 457999999886532 11 1223 6899999999999998765 999999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.... + ..++ + .+ . -++++|+||.++|.+|+++||++. .++++++.+...+.
T Consensus 172 ~~~~--~---~~p~-~----~g-----~-Divv~S~sK~l~G~~g~~~G~v~~--~~~~l~~~l~~~~~ 222 (366)
T PRK07582 172 ATPL--G---QRPL-E----LG-----A-DLVVASDTKALTGHSDLLLGYVAG--RDPELMAAVERWRL 222 (366)
T ss_pred CCcc--c---cCch-h----cC-----C-cEEEecccccccCCCCeeEEEEEc--CcHHHHHHHHHHHH
Confidence 6421 1 1121 1 11 1 256789999997778899999973 46888888876655
No 182
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.87 E-value=6.9e-20 Score=190.25 Aligned_cols=174 Identities=17% Similarity=0.193 Sum_probs=138.2
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----H
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----L 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~ 121 (509)
+.+| +..+..+|+++++++++ .+++++++|+++|+..++.+++++|| +|+++.|.|..+... +
T Consensus 58 Y~r~-~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd----~Vl~~~~~y~~~~~~~~~~~ 124 (400)
T PRK06234 58 YSRL-GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGD----HVVASDTLYGCTFALLNHGL 124 (400)
T ss_pred ccCC-CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCC----EEEEecCccchHHHHHHHHH
Confidence 4434 45567999999999983 24688899999999999999999998 999999988765543 4
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC--CcEEEEccc
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE--KLFLFADEV 199 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~--~i~lI~Dea 199 (509)
+..|++++.++.. |++++++.+++ ++++|++++|+||||.+.+ +++|+++|+++ |+++|+|++
T Consensus 125 ~~~G~~v~~vd~~-------d~e~l~~~i~~-----~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea 189 (400)
T PRK06234 125 TRYGVEVTFVDTS-------NLEEVRNALKA-----NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNT 189 (400)
T ss_pred hhCCeEEEEECCC-------CHHHHHHHhcc-----CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECC
Confidence 6689999988643 78999999987 7999999999999999987 88889999997 999999999
Q ss_pred CCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-EEEeeecCCHHHHHHHHHh
Q psy13922 200 YQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG-GYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 200 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~-G~v~~~~~~~~~~~~l~~~ 267 (509)
|..+.+. .++ .. + ..++++|+||.+ |.+|.++ ||++ .+++++++++..
T Consensus 190 ~~~~~~~-----~~l-~~----g------~Divv~S~sK~l-~g~g~~~gG~v~---~~~~~~~~l~~~ 238 (400)
T PRK06234 190 FCTPYIQ-----RPL-QL----G------ADVVVHSATKYL-NGHGDVIAGFVV---GKEEFINQVKLF 238 (400)
T ss_pred CCchhcC-----Cch-hh----C------CcEEEeeccccc-cCCCCceeEEEE---ecHHHHHHHHHH
Confidence 9875432 111 11 1 146688999999 5688765 8887 678888887653
No 183
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.87 E-value=4.2e-20 Score=192.26 Aligned_cols=202 Identities=17% Similarity=0.154 Sum_probs=144.3
Q ss_pred CCCCC-CHHHHHH-HHHHHhcccCCCcccCCC-----CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCH-HHHHHHHH
Q psy13922 22 DDPRF-PDDVKQR-AQAVLDGCRGQSVGSYTD-----SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGA-SDGIKSVL 93 (509)
Q Consensus 22 ~~~~~-p~~v~~a-~~~~l~~~~~~~~~~Y~~-----~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~-~~al~~~~ 93 (509)
+.|.+ +|.++.+ ..++ . . ...|.+ ..|.+++++++++++.+.+|. +.+++++++++ +++...+.
T Consensus 28 g~~~~~~p~~~~~~~~~~--~---~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~g~~~~~~~~~ 99 (398)
T cd00613 28 GTYKHNPPAVIKRNILEN--E---F-YTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDEATAAAEAAGL 99 (398)
T ss_pred cccCCcCcHHHHHHhccc--c---C-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCchHHHHHHHHH
Confidence 66776 3444444 4444 2 1 223555 789999999999999998874 44467676644 44544555
Q ss_pred HHhhcC--CCCCCCeEEEcCCCChhHHHHHHhcC----CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCC
Q psy13922 94 KLLIED--VDGKKPGVLIPIPQYPLYSASLAEFN----MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINP 167 (509)
Q Consensus 94 ~~l~~~--gd~~~~~Vlv~~p~y~~~~~~~~~~g----~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p 167 (509)
.++..+ || .|+++.|.|..+...+...| .+++.++.++. +.+|++.+++.+.+ ++++|++++|
T Consensus 100 ~~~~~~~~gd----~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~-----~t~~viv~~~ 168 (398)
T cd00613 100 AAIRAYHKRN----KVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEG--GTVDLEALKEEVSE-----EVAALMVQYP 168 (398)
T ss_pred HHHhcccCCC----EEEEcCccCcchHHHHHHhcccCCcEEEEeccCCC--CCcCHHHHHHhcCC-----CeEEEEEECC
Confidence 555555 66 99999999999988887777 89999887643 47899999998876 7999999988
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCC---C
Q psy13922 168 GNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGE---C 244 (509)
Q Consensus 168 ~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~---~ 244 (509)
+ |+|.+. +.+++|.++|+++|+++|+|+++...... ...... + . .+++.|++|.+ +. .
T Consensus 169 ~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~-----~~~~~~----~-----~-d~~~~s~~K~~-~p~g~G 229 (398)
T cd00613 169 N-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGL-----KPPGEY----G-----A-DIVVGNLQKTG-VPHGGG 229 (398)
T ss_pred C-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCC-----CChHHc----C-----C-CEEEeeccccC-CCCCCC
Confidence 5 899984 45799999999999999999987543211 111111 1 1 35567999997 32 2
Q ss_pred CCeeEEEeeecCCHHHHHHH
Q psy13922 245 GLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 245 Glr~G~v~~~~~~~~~~~~l 264 (509)
|.++|+++ .++++++.+
T Consensus 230 gp~~g~l~---~~~~~~~~~ 246 (398)
T cd00613 230 GPGAGFFA---VKKELVRFL 246 (398)
T ss_pred CCceeEEE---EhhhhHhhC
Confidence 78899998 577777654
No 184
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.87 E-value=6.1e-20 Score=194.02 Aligned_cols=169 Identities=16% Similarity=0.176 Sum_probs=126.4
Q ss_pred HHHHHH---HHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh-cCCCCCCCeEEEcCCCChhHHHHHHh----cCCEEE
Q psy13922 58 IRRHVA---QYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-EDVDGKKPGVLIPIPQYPLYSASLAE----FNMEQI 129 (509)
Q Consensus 58 lr~~va---~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~~~~~Vlv~~p~y~~~~~~~~~----~g~~~~ 129 (509)
++++++ +.+.+.+| ++.+++++|+|+++++..++.++. .+++ .|+++.+.|..+...++. .|.+++
T Consensus 110 ~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t~~~~~~~~a~~~~~g~----~Vlv~~~~~~~~~~~~~~~~~~~G~~~~ 183 (447)
T PRK00451 110 TLQAIFEYQTMICELTG--MDVANASMYDGATALAEAALMAVRITKRK----KVLVSGAVHPEYREVLKTYLKGQGIEVV 183 (447)
T ss_pred HHHHHHHHHHHHHHHhC--CCcceEEecCcHHHHHHHHHHHHHhcCCC----EEEEeCccCHHHHHHHHHHHHhCCcEEE
Confidence 555555 44466667 456689999999999999988875 6777 999999999988877654 699999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE--cccCCcccccC
Q psy13922 130 GYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA--DEVYQDNVYAE 207 (509)
Q Consensus 130 ~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~--Deay~~~~~~~ 207 (509)
.++.+++ .+|++.|++.+++ ++++|++++| ||||.+.+ +++|.++|+++|+++|+ |.+...+.
T Consensus 184 ~v~~~~~---~~d~~~l~~~i~~-----~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~--- 248 (447)
T PRK00451 184 EVPYEDG---VTDLEALEAAVDD-----DTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLL--- 248 (447)
T ss_pred EecCCCC---CCCHHHHHHhcCC-----CeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccC---
Confidence 9998753 7899999999976 7999999999 89999965 99999999999999998 43321110
Q ss_pred CCccccHHHHHHHhCCCCCCceeEEE--EecccccCCCCCCeeEEEeeecCCHHHHHHH
Q psy13922 208 GSKFYSFKKVLVEMGEPYKSMELASF--MSCSKGYMGECGLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~vi~i--~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l 264 (509)
.... +. +.++++. ++|||.+ .++|.++||+. .++++++.+
T Consensus 249 ----~~~~----~~-----~~D~~~~s~~k~~~~~-~~~Gpg~G~l~---~~~~~~~~~ 290 (447)
T PRK00451 249 ----KPPG----EY-----GADIVVGEGQPLGIPL-SFGGPYLGFFA---TRKKLVRQM 290 (447)
T ss_pred ----CCcc----cC-----CCCEEEECCCcCCCCC-CCCCCCchHHH---hhHHHHhhC
Confidence 0000 11 1123333 3678888 47899999997 577777765
No 185
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=3.4e-19 Score=183.49 Aligned_cols=179 Identities=13% Similarity=0.124 Sum_probs=139.5
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---- 120 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---- 120 (509)
.+++|+.+. ...|++++|++.+ .+++++|+|+++++..++.+++++|| +|+++.|+|.+....
T Consensus 46 ~Y~R~~npt-~~~Le~~lA~leg--------~e~ivvt~gg~~Ai~~~l~all~~Gd----~Il~~~~~y~~~~~~~~~~ 112 (388)
T PRK08861 46 DYTRSGNPN-RGLLEQTLSELES--------GKGAVVTNCGTSALNLWVSALLGPDD----LIVAPHDCYGGTYRLFNTR 112 (388)
T ss_pred cccCCCCch-HHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCC----EEEEcCCchHHHHHHHHHH
Confidence 356666544 4789999999883 57999999999999999999999998 999999999865433
Q ss_pred HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 121 LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 121 ~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
....|+++..++ ..|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|
T Consensus 113 ~~~~gi~v~~vd-------~~d~e~l~~~i~~-----~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~ 177 (388)
T PRK08861 113 ANKGDFKVQFVD-------QSDAAALDAALAK-----KPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTF 177 (388)
T ss_pred HhcCCeEEEEEC-------CCCHHHHHHhcCc-----CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCc
Confidence 234577887774 2478999988876 7999999999999999998 778888999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
....+. .++ . .+ . -++++|++|.+.|..++..|+++. .++++.++++..+.
T Consensus 178 ~~~~~~-----~pl-~----~G-----a-Divv~S~tK~l~G~~d~~gG~i~~--~~~~~~~~~~~~~~ 228 (388)
T PRK08861 178 LTPVLQ-----KPL-E----LG-----A-DFVIHSTTKYINGHSDVIGGVLIT--KTKEHAEELAWWGN 228 (388)
T ss_pred cccccC-----CCc-c----cC-----C-CEEEeecceeccCCCcceeEEEEe--cHHHHHHHHHHHHh
Confidence 864432 111 1 11 1 256779999997666788999863 46678777776555
No 186
>PLN02651 cysteine desulfurase
Probab=99.87 E-value=3.5e-20 Score=190.67 Aligned_cols=336 Identities=15% Similarity=0.134 Sum_probs=210.5
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCc---ccCCC--CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSV---GSYTD--SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~---~~Y~~--~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 97 (509)
...+|+.+++++.+.+........ ..++. ..-..++|+.+++++ | .++++|++|+|++++++.++..+.
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g--~~~~~v~~t~~~t~a~~~~l~~~~ 81 (364)
T PLN02651 8 TTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI----G--ADPKEIIFTSGATESNNLAIKGVM 81 (364)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCCHHHHHHHHHHHHH
Confidence 345688999999888765211111 10111 112345667777766 4 457899999999999888877653
Q ss_pred ----cCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 98 ----EDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 98 ----~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
++|+ +|+++...|..+... ++..|.+++.++.+++ +.+|++.+++.+++ +++++++++++||
T Consensus 82 ~~~~~~g~----~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~i~~-----~t~lv~v~~~~n~ 150 (364)
T PLN02651 82 HFYKDKKK----HVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSD--GLVDLDELAAAIRP-----DTALVSVMAVNNE 150 (364)
T ss_pred HhccCCCC----EEEEcccccHHHHHHHHHHHhcCCEEEEEccCCC--CcCCHHHHHHhcCC-----CcEEEEEECCCCC
Confidence 4565 999998788765443 3456999999988643 47899999999987 7999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 171 TGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
||..++ +++|.++|+++|+++++|.+++.... ...+.. . +.+++++ |..|.+ |.+| +|+
T Consensus 151 tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g~~-----~~~~~~----~-----~~D~~~~-s~hK~~-gp~G--~g~ 209 (364)
T PLN02651 151 IGVIQP---VEEIGELCREKKVLFHTDAAQAVGKI-----PVDVDD----L-----GVDLMSI-SGHKIY-GPKG--VGA 209 (364)
T ss_pred ceeccc---HHHHHHHHHHcCCEEEEEcchhhCCc-----ccCccc----C-----CCCEEEe-chhhhC-CCCc--eEE
Confidence 999988 88999999999999999999976321 111111 1 2235544 779976 6555 566
Q ss_pred EeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 251 SEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 251 v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
+.+ +++....+........ .. ..+..++.+..+..++..+++
T Consensus 210 l~v---~~~~~~~l~p~~~g~~-~~-------------------------~~~~~GT~~~~~~~~l~~al~--------- 251 (364)
T PLN02651 210 LYV---RRRPRVRLEPLMSGGG-QE-------------------------RGRRSGTENTPLVVGLGAACE--------- 251 (364)
T ss_pred EEE---cCCCCCCCCccccCCC-cc-------------------------CCccCCCccHHHHHHHHHHHH---------
Confidence 652 4433333321111000 00 011223333335555555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCeeccCC------ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHh
Q psy13922 331 EQFSREKQSVLDSLKQRAKMVADTFNS-IEGMSCNPVQ------GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLE 403 (509)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~ 403 (509)
...+..+.++++.+++.+++.+.|.+ +|+++++.+. .++.. +.++ |+. .++ +...|.
T Consensus 252 -~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~-~~~~------------~~~-~~~-~~~~L~ 315 (364)
T PLN02651 252 -LAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLN-LSFA------------YVE-GES-LLMGLK 315 (364)
T ss_pred -HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEE-EEeC------------CCC-HHH-HHHHhC
Confidence 22223577788888999999999885 6788877541 22333 2233 222 333 344455
Q ss_pred hcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe
Q psy13922 404 RTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI 483 (509)
Q Consensus 404 ~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~ 483 (509)
+ |.+..|..|.. ..++...+++++|+......+ .+|+|+
T Consensus 316 ~--i~v~~g~~c~~-------------------------------~~~~~~~~~~~~g~~~~~~~~--------~vR~S~ 354 (364)
T PLN02651 316 E--VAVSSGSACTS-------------------------------ASLEPSYVLRALGVPEEMAHG--------SLRLGV 354 (364)
T ss_pred C--EEEEchhhcCC-------------------------------CCCCcCHHHHHcCCChHHhCc--------eEEEEc
Confidence 4 99998886655 223333455555543211223 899999
Q ss_pred e--cChHHHH
Q psy13922 484 L--PQPEKLK 491 (509)
Q Consensus 484 ~--~~~~~i~ 491 (509)
. +|++||+
T Consensus 355 ~~~~t~~did 364 (364)
T PLN02651 355 GRFTTEEEVD 364 (364)
T ss_pred CCCCCHHHcC
Confidence 9 7888874
No 187
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.86 E-value=1.3e-19 Score=188.95 Aligned_cols=316 Identities=11% Similarity=0.086 Sum_probs=200.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC-----CC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED-----VD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----gd 101 (509)
+|.+.+++.+++..... ..++.......++.+.++++. + .+.+++++++++|+..+++.++.. |-
T Consensus 59 ~~~i~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~ 128 (401)
T PRK00854 59 HPKILAAMVEQAGRLTL--TSRAFRNDQLAPLYEELAALT----G----SHKVLPMNSGAEAVETAIKAVRKWGYEVKGV 128 (401)
T ss_pred CHHHHHHHHHHHhhccc--cccccCCHHHHHHHHHHHhhC----C----CCEEEEeCCcHHHHHHHHHHHHHHHHhccCC
Confidence 78899999999987321 111122233355666666654 3 358999999999999999998642 11
Q ss_pred C-CCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCC
Q psy13922 102 G-KKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINP 167 (509)
Q Consensus 102 ~-~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p 167 (509)
+ .++.|++..-+|++....+...+. .+..++ ..|++.|++.+.+ ++++|++++|
T Consensus 129 ~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~i~~-----~~~aii~e~~ 196 (401)
T PRK00854 129 PEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEAAITP-----NTVAFLVEPI 196 (401)
T ss_pred CCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHHHhCC-----CeEEEEEccc
Confidence 1 134788888888886544433221 112221 2478999998876 7999999999
Q ss_pred CCCCCCCCC-HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-
Q psy13922 168 GNPTGQVLT-KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG- 245 (509)
Q Consensus 168 ~NPtG~~~s-~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G- 245 (509)
+||+|.+++ ++++++|.++|++||+++|+||+|..+...+. . +..-..+..+ ++++ +||.++ .|
T Consensus 197 ~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~--~--~~~~~~g~~~-----D~~~---~~K~l~--gg~ 262 (401)
T PRK00854 197 QGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK--L--LAEEHEGIEA-----DVTL---IGKALS--GGF 262 (401)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch--H--hHHhhcCCCC-----CEEE---eccccc--CCc
Confidence 999999887 55699999999999999999999987755431 1 1110111111 2443 479995 45
Q ss_pred CeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCC
Q psy13922 246 LRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQ 324 (509)
Q Consensus 246 lr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 324 (509)
+|+||++ .++++++.+..... ...+.+.+ .+++....++
T Consensus 263 ~~ig~v~---~~~~~~~~l~~~~~~~t~~~~~~----------------------------------~~aa~~a~L~--- 302 (401)
T PRK00854 263 YPVSAVL---SNSEVLGVLKPGQHGSTFGGNPL----------------------------------ACAVARAALK--- 302 (401)
T ss_pred cCeEEEE---EcHHHHhcccCCCCCCCCCcCHH----------------------------------HHHHHHHHHH---
Confidence 7999998 78888887764322 22234444 2222222211
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHH
Q psy13922 325 PGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEG--MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELL 402 (509)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll 402 (509)
..+ .+.+.+.++++.+++.+.|+++.. +....+.|.++.+ .+..+. .....++..+
T Consensus 303 --------~l~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i-~~~~~~-----------~~~~~~~~~L- 360 (401)
T PRK00854 303 --------VLT-EEGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAV-ELEPEA-----------GGARQYCEAL- 360 (401)
T ss_pred --------HHH-HcCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEE-EEecCc-----------hhHHHHHHHH-
Confidence 111 122567777888888888887622 1122345555554 232110 1234444444
Q ss_pred hhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEE
Q psy13922 403 ERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTT 482 (509)
Q Consensus 403 ~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls 482 (509)
.++||.+.+. +.. ++|++
T Consensus 361 ~~~GV~v~~~------------------------------------------------------~~~--------~lR~~ 378 (401)
T PRK00854 361 KERGLLAKDT------------------------------------------------------HDH--------TIRLA 378 (401)
T ss_pred HHCCeEEecC------------------------------------------------------CCC--------EEEEe
Confidence 4569998641 112 89999
Q ss_pred e--ecChHHHHHHHHHHHHHHH
Q psy13922 483 I--LPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 483 ~--~~~~~~i~~~~~~l~~~~~ 502 (509)
+ .+++++|++++++|++++.
T Consensus 379 p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 379 PPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred CCcccCHHHHHHHHHHHHHHhh
Confidence 5 4899999999999998763
No 188
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=3.5e-19 Score=184.55 Aligned_cols=177 Identities=11% Similarity=0.063 Sum_probs=134.6
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH----HH
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA----SL 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~----~~ 121 (509)
+++|+.+ -...+++.++++++ .+..++++++++|+..++.+++++|| +|+++.|+|.+... .+
T Consensus 58 y~r~~~p-~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all~~GD----~Vi~~~~~y~~~~~~~~~~~ 124 (398)
T PRK08249 58 YSRNTNP-TVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFLKPGD----RVVSIKDTYGGTNKIFTEFL 124 (398)
T ss_pred ccCCCCh-HHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCC----EEEEcCCchHHHHHHHHHHH
Confidence 3344433 34789999999883 34567777778999999999999998 99999999987543 34
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
...|+++..++ ..|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.
T Consensus 125 ~~~Gi~v~~vd-------~~d~e~l~~~i~~-----~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a 189 (398)
T PRK08249 125 PRMGVDVTLCE-------TGDHEQIEAEIAK-----GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFA 189 (398)
T ss_pred hhCCeEEEEcC-------CCCHHHHHHhcCC-----CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcC
Confidence 56788887765 2489999999976 7999999999999999988 8889999999999999999998
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.+... .++ .. .. -++++|+||.+ |.+|.++|++++ ++++++++++..+.
T Consensus 190 ~~~~~-----~~l-~~---------~~-Divv~S~sK~l-~g~~~~~gG~vv--~~~~l~~~l~~~~~ 238 (398)
T PRK08249 190 TPINQ-----NPL-AL---------GA-DLVIHSATKFL-SGHADALGGVVC--GSKELMEQVYHYRE 238 (398)
T ss_pred ccccC-----Cch-hh---------CC-CEEeccCceec-CCCCCceEEEEE--CCHHHHHHHHHHHH
Confidence 65432 111 11 11 25568999999 446766644433 78889998877665
No 189
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.86 E-value=5.7e-19 Score=181.78 Aligned_cols=202 Identities=17% Similarity=0.238 Sum_probs=154.2
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~g 100 (509)
..|.+++..++++.+++.+ ++.... .++++++++++.+.+| .+++++|+|+++++.+++.++ .++|
T Consensus 5 ~~p~~~~~e~~a~~~~~~~---~~~~~~------g~~~~~~e~~la~~~g----~~~~v~~~sgt~aL~~~l~al~~~pG 71 (376)
T TIGR02379 5 NKPPVTGQELEYIAEAISE---GKLSGD------GPFSRRCETWLENRTG----TKKALLTPSCTAALEMAALLLDIQPG 71 (376)
T ss_pred CCCCCCHHHHHHHHHHHHc---CCccCC------cHHHHHHHHHHHHHhC----CCeEEEeCCHHHHHHHHHHHcCCCCc
Confidence 4577888889999998887 443311 2345555555554434 468999999999999999888 7888
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
| .|+++.++|..+...+...|++++.++++++ +|.+|++.+++.+++ ++++|+ |+||+|...+ +
T Consensus 72 d----~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~-~~~~d~~~le~~i~~-----~tk~Ii---p~~~~G~~~d---~ 135 (376)
T TIGR02379 72 D----EVIMPSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIESAITH-----RTKAIV---PVHYAGVACD---M 135 (376)
T ss_pred C----EEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCc-----CceEEE---EeCCCCCccC---H
Confidence 8 9999999999999999999999999999865 478999999999876 789886 6678999877 7
Q ss_pred HHHHHHHHHCCcEEEEcccCCccc-ccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNV-YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
++|.++|+++|++||+|++|+.+. +.+. ...++. +.-++++++ +|.++ +|.++|++++ .+++
T Consensus 136 ~~I~~la~~~~i~vIeDaa~~~g~~~~~~-~~g~~~-----------~~~~fSf~~-~K~l~--~g~~gG~v~~--~~~~ 198 (376)
T TIGR02379 136 DTIMALANKHQLFVIEDAAQGVMSTYKGR-ALGSIG-----------HLGTFSFHE-TKNYT--SGGEGGALLI--NDQA 198 (376)
T ss_pred HHHHHHHHHCCCEEEEECccccCCccCCc-ccCCCC-----------CEEEEeCCC-CCcCc--ccCCceEEEE--CCHH
Confidence 899999999999999999998765 3321 110100 111222211 48884 7889999864 7899
Q ss_pred HHHHHHHhhh
Q psy13922 260 VKAMLHKSIS 269 (509)
Q Consensus 260 ~~~~l~~~~~ 269 (509)
+.++++.++.
T Consensus 199 ~~~~~~~~~~ 208 (376)
T TIGR02379 199 FIERAEIIRE 208 (376)
T ss_pred HHHHHHHHHH
Confidence 9999988775
No 190
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.86 E-value=2.6e-19 Score=185.20 Aligned_cols=223 Identities=13% Similarity=0.131 Sum_probs=154.0
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH--
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA-- 122 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~-- 122 (509)
.+++|+.+. ..+|++.++++++ .++.+++++++.++..++.+++++|| +|+++.|.|......+.
T Consensus 54 ~y~r~~~pt-~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd----~Vv~~~~~y~~~~~~~~~~ 120 (386)
T PRK06767 54 IYSRLGNPT-VKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGD----HIICSNGLYGCTYGFLEVL 120 (386)
T ss_pred cccCCCCcc-hHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEcCCcHHHHHHHHHHH
Confidence 455565544 4889999999983 23455555666799999999999998 99999998887655543
Q ss_pred --hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 123 --EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 123 --~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
..|+++..++ ..|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|
T Consensus 121 ~~~~gi~~~~~~-------~~d~~~l~~~i~~-----~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~ 185 (386)
T PRK06767 121 EEKFMITHSFCD-------METEADIENKIRP-----NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTF 185 (386)
T ss_pred HhhcCeEEEEeC-------CCCHHHHHHhhCc-----CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCC
Confidence 3465554443 2378999998876 7999999999999999988 788888999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-EEEeeecCCHHHHHHHHH-hhhcccC-cchh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG-GYSEVINLDPGVKAMLHK-SISAMLC-PTVL 277 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~-G~v~~~~~~~~~~~~l~~-~~~~~~~-~~~~ 277 (509)
...... .++. . .. -++++|+||.+ |.+|.++ ||++ .++++++++.+ .....++ .+.+
T Consensus 186 a~~~~~-----~pl~-----~-----g~-Div~~S~sK~l-~g~g~~~gG~v~---~~~~~i~~~~~~~~~~~g~~~~~~ 245 (386)
T PRK06767 186 CSPYLQ-----RPLE-----L-----GC-DAVVHSATKYI-GGHGDVVAGVTI---CKTRALAEKIRPMRKDIGGIMAPF 245 (386)
T ss_pred cccccC-----Cchh-----c-----CC-cEEEecCccee-cCCCCceeEEEE---eChHHHHHHHHHHHHHhCCCCCHH
Confidence 643221 1111 1 11 25567999999 4578875 8887 67777766543 2222221 1222
Q ss_pred hhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy13922 278 ALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS 357 (509)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 357 (509)
.+.++...++ .+....+...++...+.+.|++
T Consensus 246 ----------------------------------~a~l~~~~L~--------------tl~~r~~~~~~~a~~la~~L~~ 277 (386)
T PRK06767 246 ----------------------------------DAWLLLRGLK--------------TLAVRMDRHCDNAEKIVSFLKN 277 (386)
T ss_pred ----------------------------------HHHHHHcCCC--------------cHHHHHHHHHHHHHHHHHHHHc
Confidence 1111111111 1455667778899999999999
Q ss_pred CCCCee
Q psy13922 358 IEGMSC 363 (509)
Q Consensus 358 ~~g~~~ 363 (509)
+|+++.
T Consensus 278 ~p~v~~ 283 (386)
T PRK06767 278 HDAVEG 283 (386)
T ss_pred CCCccE
Confidence 998873
No 191
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.86 E-value=1.2e-18 Score=180.52 Aligned_cols=207 Identities=14% Similarity=0.101 Sum_probs=143.1
Q ss_pred CHHHHHHHHHHHhcccCC---CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQ---SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~---~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
.|.+++++.+++++...+ .-..|+...+..+|++++|++++ ..+.+++++|.++.. .++.+++++||
T Consensus 14 ~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g-------~e~al~~~sG~~a~~-~~i~~l~~~GD-- 83 (392)
T PLN03227 14 SPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG-------TESAILYSDGASTTS-STVAAFAKRGD-- 83 (392)
T ss_pred CHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC-------CCcEEEecCcHHHHH-HHHHHhCCCCC--
Confidence 467888888888763311 12237777788899999999994 235677777776665 77778899998
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh---------ccCCceEEEEeCCCCCCCCC
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR---------KHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~---------~~~~~~~ivi~~p~NPtG~~ 174 (509)
.|+++.+.|.++...+...+.++..++.. |++.+++.++... ..+++++|++.+++||+|.+
T Consensus 84 --~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i 154 (392)
T PLN03227 84 --LLVVDRGVNEALLVGVSLSRANVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTL 154 (392)
T ss_pred --EEEEeccccHHHHHHHHHcCCeEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcc
Confidence 99999999999988887778887777643 3444444333211 01257888899999999999
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
.+ +++|.++|++||+++|+||+|. +...+. ......+.. .+.+. ....+++.|+||.+ | ..+|+++
T Consensus 155 ~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~-~G~g~~~~~-g~~p~--~~~Div~~slsk~~-g---~~gg~v~-- 220 (392)
T PLN03227 155 AP---LKELVALKEEFHYRLILDESFS-FGTLGK-SGRGSLEHA-GLKPM--VHAEIVTFSLENAF-G---SVGGMTV-- 220 (392)
T ss_pred cC---HHHHHHHHHHcCCEEEEECccc-ccccCC-CCCcHHHHc-CCCCC--CCceEEEeechhhh-h---ccCcEEe--
Confidence 99 8899999999999999999997 332221 111222211 11110 11145566899976 4 4568876
Q ss_pred cCCHHHHHHHHHh
Q psy13922 255 NLDPGVKAMLHKS 267 (509)
Q Consensus 255 ~~~~~~~~~l~~~ 267 (509)
+++++++.++..
T Consensus 221 -~~~~~~~~~~~~ 232 (392)
T PLN03227 221 -GSEEVVDHQRLS 232 (392)
T ss_pred -cCHHHHHHHHHh
Confidence 788888877654
No 192
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.86 E-value=3.5e-19 Score=185.08 Aligned_cols=173 Identities=16% Similarity=0.216 Sum_probs=133.7
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH----HHH
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS----ASL 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~----~~~ 121 (509)
+++|+.+ ....+++.++++++ .++.+++++++.++.+++..+.++|| +|+++.|.|.... ..+
T Consensus 59 y~r~~~p-~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~Gd----~Viv~~~~y~~t~~~~~~~~ 125 (403)
T PRK07503 59 YSRISNP-TLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPGD----EVIVDQTLYGCTFAFLHHGL 125 (403)
T ss_pred eeCCCCc-hHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCC----EEEEccCccchHHHHHHHHH
Confidence 4555443 34789999999883 23456677778899999999999998 9999999886533 345
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
...|+++..++.+ |++.+++.+++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|.
T Consensus 126 ~~~G~~v~~vd~~-------d~~~l~~~i~~-----~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a 190 (403)
T PRK07503 126 GEFGVTVRHVDLT-------DPAALKAAISD-----KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYC 190 (403)
T ss_pred hhCCEEEEEeCCC-------CHHHHHHhcCc-----cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCc
Confidence 6789999988753 68999998876 7999999999999999977 8899999999999999999998
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-CeeEEEeeecCCHHHHHHHHH
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG-LRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G-lr~G~v~~~~~~~~~~~~l~~ 266 (509)
..... .++ .. + . .++++|+||.++ .+| +++|+++ .+++++++++.
T Consensus 191 ~~~~~-----~~l-~~----g-----~-Di~v~S~tK~l~-g~gd~~gG~v~---~~~~l~~~l~~ 236 (403)
T PRK07503 191 TPYLQ-----RPL-EL----G-----A-DLVVHSATKYLG-GHGDITAGLVV---GGKALADRIRL 236 (403)
T ss_pred ccccC-----Cch-hh----C-----C-CEEEcccccccc-CCCceeEEEEE---cCHHHHHHHHh
Confidence 64321 121 11 1 1 366789999994 444 7888887 78888888864
No 193
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=1.2e-19 Score=187.50 Aligned_cols=317 Identities=10% Similarity=0.093 Sum_probs=203.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|.+++++.+++.... . ++. .-..++++++++.+.. .++ .+++++++++++..+++....... ++
T Consensus 46 ~p~v~~a~~~~~~~~~---~--~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGseA~~~Al~~ar~~~~--~~ 111 (375)
T PRK04260 46 HPQVQQALQKQAGLIW---H--SPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGAEANEAAIKIARKATG--KQ 111 (375)
T ss_pred CHHHHHHHHHHHHhcC---c--ccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccHHHHHHHHHHHHHhcC--CC
Confidence 5679999999988721 1 222 2236688899987742 123 468899999999999888754221 34
Q ss_pred eEEEcCCCChhHH-HHHHhcCCEEEE------EecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC-CCH
Q psy13922 106 GVLIPIPQYPLYS-ASLAEFNMEQIG------YYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV-LTK 177 (509)
Q Consensus 106 ~Vlv~~p~y~~~~-~~~~~~g~~~~~------v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~-~s~ 177 (509)
.|++....|++.. ..+...|.+... ++...... ..|++.+++.+.+ ++++|++.+++|++|.. .+.
T Consensus 112 ~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dl~~l~~~l~~-----~~a~vi~e~v~~~~G~~~~~~ 185 (375)
T PRK04260 112 EIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI-FNDLNSVKALVNK-----NTAAVMLELVQGESGVLPADK 185 (375)
T ss_pred eEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC-CCCHHHHHHhcCC-----CeEEEEECCeECCCCCcCCCH
Confidence 8999999988743 333222221110 00000000 2378889887765 68888999999999985 457
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+.+++|.++|+++|+++|+||+|.++..++. ..+... ....+ + +.||||.+ | +|+|+||++ .+
T Consensus 186 ~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~--~~~~~~--~~~~p-----d---i~t~sK~l-~-~G~~ig~~~---~~ 248 (375)
T PRK04260 186 DFVKALADYCQETGILLIVDEVQTGMGRTGK--LYAFEH--YGIEP-----D---IFTLAKGL-A-NGVPVGAML---AK 248 (375)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCCCcccc--hhhhHh--hCCCC-----C---EEEecccc-c-CCcceEEEE---Ec
Confidence 8899999999999999999999988755431 212111 11211 1 34899999 4 899999998 78
Q ss_pred HHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 258 PGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 258 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
+++.+.+..... .+.+.+.+ .++++...++ .-...+.
T Consensus 249 ~~~~~~~~~~~~~~t~~~~~~----------------------------------~~~aa~a~l~--------~~~~~~~ 286 (375)
T PRK04260 249 SSLGGAFGYGSHGSTFGGNKL----------------------------------SMAAASATLD--------IMLTAGF 286 (375)
T ss_pred HHHHhhcCCCCCCCCCCcCHH----------------------------------HHHHHHHHHH--------HHHhhHH
Confidence 888887754222 23334444 3333333322 0111123
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
++++++..+.+++.+.+.+.+.+.+..+.. .|+++|+++.. +... +...+.++||.+.|+.
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~--------------~~~~-~~~~l~~~Gi~v~~~~--- 347 (375)
T PRK04260 287 LEQALENGNYLQEQLQKALQDKETVTTVRG-LGYMIGIETTA--------------DLSQ-LVEAARDKGLIVLTAG--- 347 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEec-cceEEEEEecC--------------cHHH-HHHHHHhCCCEEecCC---
Confidence 566677777777777777766543333333 78888977641 1223 3456667899997631
Q ss_pred CCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHH
Q psy13922 417 QVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAML 494 (509)
Q Consensus 417 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~ 494 (509)
. . .+|++.. .++++|++++
T Consensus 348 -------------------------------------------------~--~--------~lR~~~~~~~t~~~i~~~l 368 (375)
T PRK04260 348 -------------------------------------------------T--N--------VIRLLPPLTLTKEEIEQGI 368 (375)
T ss_pred -------------------------------------------------C--C--------EEEEcCCCccCHHHHHHHH
Confidence 1 1 7899884 7899999999
Q ss_pred HHHHHH
Q psy13922 495 EKFREF 500 (509)
Q Consensus 495 ~~l~~~ 500 (509)
++|+++
T Consensus 369 ~~l~~~ 374 (375)
T PRK04260 369 AILSEV 374 (375)
T ss_pred HHHHHh
Confidence 999875
No 194
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.86 E-value=4.3e-19 Score=184.09 Aligned_cols=174 Identities=16% Similarity=0.260 Sum_probs=131.1
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---- 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---- 121 (509)
+.+|+.+. ...|++.+|++++ .+..+++++++.++..++.+++++|| +|+++.|.|.++...+
T Consensus 59 y~r~~~p~-~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~~l~~~l~~Gd----~Vl~~~~~y~~~~~~~~~~~ 125 (398)
T PRK07504 59 YSRYSNPT-VDMFEKRMCALEG--------AEDARATASGMAAVTAAILCQVKAGD----HVVAARALFGSCRYVVETLL 125 (398)
T ss_pred eecCCCch-HHHHHHHHHHHhC--------CCeeeEecCHHHHHHHHHHHHhCCCC----EEEEcCCchhHHHHHHHHHH
Confidence 45565443 4789999999883 23345577788899888888889998 9999999999765443
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
...|+++..++ .+|++.+++++++ ++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|.
T Consensus 126 ~~~G~~v~~vd-------~~d~e~l~~ai~~-----~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a 190 (398)
T PRK07504 126 PRYGIESTLVD-------GLDLDNWEKAVRP-----NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFA 190 (398)
T ss_pred hhcCeEEEEEC-------CCCHHHHHHhcCc-----CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCcc
Confidence 45688888875 3589999999876 7999999999999999988 8888999999999999999998
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHH-HHHH
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKA-MLHK 266 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~-~l~~ 266 (509)
...+. .+. .. + . .++++|+||.+ |.+|.++|++++ .+++++. .++.
T Consensus 191 ~~~~~-----~~~-~~----g-----a-Divv~S~sK~l-~g~g~~~GG~vv--~~~~~i~~~~~~ 237 (398)
T PRK07504 191 TPLFQ-----KPL-EL----G-----A-HIVVYSATKHI-DGQGRCLGGVVL--SDKAWIEEHLQD 237 (398)
T ss_pred ccccC-----Cch-hh----C-----C-CEEEeeccccc-cCCccceEEEEE--eCcHHHHHHHHH
Confidence 65432 111 11 1 1 35677999999 568999875543 5555554 3443
No 195
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.86 E-value=1.8e-19 Score=188.53 Aligned_cols=339 Identities=11% Similarity=0.066 Sum_probs=200.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+. .+..+.... .+.+.++++.+.+... ....+.+++++++++|++.+++..+.... ++.
T Consensus 51 ~p~v~~a~~~ql~~~---~~~~~~~~~--~~~~~~la~~l~~~~p-~~~~~~v~f~~sGseA~e~AlklAr~~tg--r~~ 122 (420)
T TIGR00700 51 HPRVVDAVRTQVAEF---THTCFMVTP--YEGYVALAEKLNRIAP-GSGPKKSVFFNSGAEAVENAVKIARSYTG--RPG 122 (420)
T ss_pred CHHHHHHHHHHHHhc---cCccccccC--ChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHHHHHHHHHHHHHhcC--CCc
Confidence 689999999999873 222121111 2233445554443321 01225899999999999999998765432 447
Q ss_pred EEEcCCCChhHHHHHHhc-CC-------------EEEEEecCCCCC---------CCCCHHHHHHHHHhhhccCCceEEE
Q psy13922 107 VLIPIPQYPLYSASLAEF-NM-------------EQIGYYLDESKQ---------WGLPISELERSITEARKHCNPRAIV 163 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~---------~~~d~~~L~~~i~~~~~~~~~~~iv 163 (509)
|+....+|++....+... +- .+..++...... +.-+++.+++.+.......++.+|+
T Consensus 123 ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi 202 (420)
T TIGR00700 123 VVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALV 202 (420)
T ss_pred EEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEE
Confidence 888899999876544332 11 112222210000 0002456666664211123688888
Q ss_pred EeCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 164 IINPGNPTGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 164 i~~p~NPtG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
+...+.-+|..+ +++.+++|.++|++||+++|+||+|.+|.+.+ .+.++... ++.+ + +.++||.+ |
T Consensus 203 ~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g--~~~a~~~~--~~~p-----D---i~~lsK~l-~ 269 (420)
T TIGR00700 203 IEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG--AMFACEHE--GPEP-----D---LITTAKSL-A 269 (420)
T ss_pred ECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc--hhHHHhhc--CCCC-----C---EEEeeccc-c
Confidence 876666778755 56669999999999999999999999987754 22222221 1111 1 34689999 5
Q ss_pred CCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccC
Q psy13922 243 ECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVN 321 (509)
Q Consensus 243 ~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 321 (509)
+|+|+||++ .++++++.+..... .+.+.+.+++.+ +.+++..+.+
T Consensus 270 -~G~pig~v~---~~~~i~~~~~~~~~~~T~~~~pl~~aa------------------------------a~a~l~~l~~ 315 (420)
T TIGR00700 270 -DGLPLSGVT---GRAEIMDAPAPGGLGGTYAGNPLACAA------------------------------ALAVLAIIES 315 (420)
T ss_pred -CCcceEEEE---ecHHHHhhcCCCCcCCCCCcCHHHHHH------------------------------HHHHHHHHHh
Confidence 899999998 78999988754322 344555553322 3333433322
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHH--
Q psy13922 322 PPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAF-- 399 (509)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-- 399 (509)
+...++.+++.+.++++.+.+.+ ..|.+..+.+. |.+.|+.+..+. .+. ++..+..
T Consensus 316 ---------~~~~~~~~~~g~~l~~~L~~l~~---~~~~~~~vrg~-G~~~~i~~~~~~--------~~~-~~~~~~~~l 373 (420)
T TIGR00700 316 ---------EGLIERARQIGRLVTDRLTTLKA---VDPRIGDVRGL-GAMIAVELVDPG--------TTE-PDAGLAERI 373 (420)
T ss_pred ---------ccHHHHHHHHHHHHHHHHHHHHh---hCCCEEEeecc-ceEEEEEEecCC--------CCC-ccHHHHHHH
Confidence 12333344444444444333333 33444444455 566666553110 001 1222222
Q ss_pred -HHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCcee
Q psy13922 400 -ELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYH 478 (509)
Q Consensus 400 -~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (509)
..+.++||.+.|+..|+. +
T Consensus 374 ~~~~~~~Gv~i~p~~~f~~------------------------------------------------------------~ 393 (420)
T TIGR00700 374 ATAAHAAGLLLLTCGMFGN------------------------------------------------------------I 393 (420)
T ss_pred HHHHHHCCeEEeccCCCCC------------------------------------------------------------E
Confidence 334678999998765544 8
Q ss_pred EEEEee--cChHHHHHHHHHHHHHHH
Q psy13922 479 FRTTIL--PQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 479 ~Rls~~--~~~~~i~~~~~~l~~~~~ 502 (509)
+|+++. .++++|++++++|.+++.
T Consensus 394 lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 394 IRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 999975 689999999999999874
No 196
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.86 E-value=1.1e-19 Score=189.03 Aligned_cols=202 Identities=12% Similarity=0.085 Sum_probs=135.7
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++++..... ..|+ .+...++++.+.+..+ .+.+++++++++|+..+++..+.- +..
T Consensus 53 ~p~v~~a~~~~~~~~~~~~-~~~~-----~~~~~~la~~L~~~~~----~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~ 122 (397)
T TIGR03246 53 HPELVKALIEQADKLWHIG-NGYT-----NEPVLRLAKKLVDATF----ADKVFFCNSGAEANEAALKLARRYALDKHGA 122 (397)
T ss_pred CHHHHHHHHHHHHhccccc-CccC-----CHHHHHHHHHHHhhCC----CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 7899999999988721111 1122 2233444444433322 368999999999999999987422 111
Q ss_pred CCCeEEEcCCCChhHHHHHHh-cCCE------------EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAE-FNME------------QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
.+..|+..+-.|++....... .+.. +..++ ..|++.+++.+.+ ++++|+++.+++
T Consensus 123 ~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~-----~~aavi~Epi~~ 190 (397)
T TIGR03246 123 DKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-------YNDLAAAKALISD-----KTCAVIVEPIQG 190 (397)
T ss_pred CCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-------CCCHHHHHHHhcc-----CeEEEEEecccC
Confidence 245788888888887543332 2221 11111 2378999998875 788988886777
Q ss_pred CCCCC-CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 170 PTGQV-LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 170 PtG~~-~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
+.|.. .+++++++|.++|++||+++|+||+|.++...+. ..+.... ++.++ +.++||.+ | +|+|+
T Consensus 191 ~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~--~~a~~~~--gv~pD--------i~t~~K~l-g-gG~pi 256 (397)
T TIGR03246 191 EGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE--LYAYMHY--GVTPD--------ILTSAKAL-G-GGFPI 256 (397)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcccc--chhhhhc--CCCCC--------EEEeehhh-h-CCcce
Confidence 77765 4899999999999999999999999988865542 2221111 12111 33789999 5 89999
Q ss_pred EEEeeecCCHHHHHHHHHh
Q psy13922 249 GYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l~~~ 267 (509)
||++ .++++++.+...
T Consensus 257 gav~---~~~~i~~~~~~~ 272 (397)
T TIGR03246 257 GAML---TTTEIAAHLKVG 272 (397)
T ss_pred eEEE---EcHHHHHhccCC
Confidence 9998 788888888643
No 197
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.86 E-value=3.8e-19 Score=187.67 Aligned_cols=346 Identities=13% Similarity=0.123 Sum_probs=201.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.++++.........+ ..+.+..+++.+.+..+.. ..+.++++++++||.+.+++..+.-.. +..
T Consensus 72 ~p~v~~ai~~q~~~~~~~~~~~~-----~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~tg--r~~ 143 (451)
T PRK06918 72 HPKVKEALHKQVDQYIHTGFNVM-----MYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEAVENAVKIARKYTK--RQG 143 (451)
T ss_pred CHHHHHHHHHHHHhccCcccccc-----ccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHHHHHHHHHHHHHhC--CCc
Confidence 68899999999987321111111 1334455555554432211 115899999999999999998765432 457
Q ss_pred EEEcCCCChhHHHHHHhc-CC-------------EEEEEecCCC--CCCCCC--------HHHHHHHHHhhhccCCceEE
Q psy13922 107 VLIPIPQYPLYSASLAEF-NM-------------EQIGYYLDES--KQWGLP--------ISELERSITEARKHCNPRAI 162 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~~~~~~i 162 (509)
|+....+|++....+... +. .+..+|.... ...++. ++.+++.+.......++.+|
T Consensus 144 ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAav 223 (451)
T PRK06918 144 IISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAV 223 (451)
T ss_pred EEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEE
Confidence 999999999876554432 21 0122221100 000111 12344433211111256676
Q ss_pred EEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 163 VIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 163 vi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
++...+.-.|. ..+++.+++|.++|++||+++|+||+|.+|.+.+ .+.++..+. ..+ + +.|+||.+
T Consensus 224 i~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g--~~~a~~~~~--v~p-----D---i~t~sK~l- 290 (451)
T PRK06918 224 VMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG--KYFAIEHFD--VVP-----D---LITVSKSL- 290 (451)
T ss_pred EECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC--ceehhHhcC--CCC-----C---EEeeehhh-
Confidence 66544444466 5566779999999999999999999999997764 233333321 111 1 44889999
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhccc
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVV 320 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 320 (509)
| +|+|+||++ .++++++.+..... .+.+.+.+++.+ +.+++..+.
T Consensus 291 ~-~G~pig~v~---~~~~i~~~~~~~~~~~T~~g~~l~~aa------------------------------a~a~l~~i~ 336 (451)
T PRK06918 291 G-AGVPISGVI---GRKEIMDESAPGELGGTYAGSPLGCAA------------------------------ALAVLDIIE 336 (451)
T ss_pred c-CCCccEEEE---EcHHHHhccCCCCcCcCCCcCHHHHHH------------------------------HHHHHHHHH
Confidence 5 899999998 78899888754333 344556653333 333443332
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCc--HHHH
Q psy13922 321 NPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPS--VLYA 398 (509)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~ 398 (509)
+ +...++.+++.+.+.++.+.+.+ +.+.+..+.+.|.++.|.....+. ....+. ...+
T Consensus 337 ~---------~~~~~~~~~~g~~l~~~l~~l~~---~~~~~~~vrg~G~~~~~~~~~~~~--------~~~~~~~~~~~l 396 (451)
T PRK06918 337 K---------ENLNDRAIELGKVVMNRFEEMKN---KYNCIGDVRGLGAMCAFELVQDRK--------TKEPDKTLTANI 396 (451)
T ss_pred H---------CCHHHHHHHHHHHHHHHHHHHHh---hCCCceeeccceeEEEEEEccCCC--------cCCCcHHHHHHH
Confidence 2 12223344444444444443332 233333345678888875432110 001111 1112
Q ss_pred HHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCcee
Q psy13922 399 FELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYH 478 (509)
Q Consensus 399 ~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (509)
...+.++||.+.|+..|+. +
T Consensus 397 ~~~~~~~Gvlv~~~~~~~~------------------------------------------------------------~ 416 (451)
T PRK06918 397 CKEANKRGLLLLSAGTYGN------------------------------------------------------------V 416 (451)
T ss_pred HHHHHHCCeEEeecCCCCC------------------------------------------------------------E
Confidence 3445678999998754433 7
Q ss_pred EEEEee--cChHHHHHHHHHHHHHHHHHHhh
Q psy13922 479 FRTTIL--PQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 479 ~Rls~~--~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
+|+++. .++++|++++++|.++++++..+
T Consensus 417 lrl~p~l~~t~~~id~~l~~l~~~l~~~~~~ 447 (451)
T PRK06918 417 IRVLMPLVITDEQLEEGLTIIEESLQACYEK 447 (451)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHHHHHh
Confidence 888874 78999999999999999876543
No 198
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.86 E-value=3e-19 Score=183.88 Aligned_cols=177 Identities=18% Similarity=0.195 Sum_probs=136.0
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----H
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----L 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~ 121 (509)
+.+|+ ..-..+|++.++++++ .+..++++++++|+..++.++.++|| +|+++.++|.+.... +
T Consensus 34 y~r~~-~p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~~~gd----~Vl~~~~~y~~~~~~~~~~~ 100 (369)
T cd00614 34 YSRIG-NPTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALLKAGD----HVVASDDLYGGTYRLFERLL 100 (369)
T ss_pred eECCC-ChhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHcCCCC----EEEECCCCcchHHHHHHHHH
Confidence 34343 3345788899998873 25677888889999999999999998 999999999886543 4
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
...|+++..++.+ |++.+++.+++ ++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|.
T Consensus 101 ~~~g~~~~~v~~~-------d~~~l~~~i~~-----~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~ 165 (369)
T cd00614 101 PKLGIEVTFVDPD-------DPEALEAAIKP-----ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFA 165 (369)
T ss_pred hhcCeEEEEeCCC-------CHHHHHHhcCC-----CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCc
Confidence 4678888887643 58889988876 7999999999999999987 8899999999999999999997
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH-HHHHHHHHhhh
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP-GVKAMLHKSIS 269 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~-~~~~~l~~~~~ 269 (509)
...+. .++ . .+ ..++++|+||.++|..++++||++ .++ +++++++....
T Consensus 166 ~~~~~-----~~~-~----~g------~Divv~S~tK~l~g~~~~~gG~v~---~~~~~l~~~l~~~~~ 215 (369)
T cd00614 166 TPYLQ-----RPL-E----LG------ADIVVHSATKYIGGHSDVIAGVVV---GSGEALIQRLRFLRL 215 (369)
T ss_pred chhcC-----Chh-h----hC------CcEEEeccceeccCCCCceEEEEE---eCcHHHHHHHHHHHH
Confidence 64331 111 1 11 146678999999542338899997 454 88888876654
No 199
>PLN00144 acetylornithine transaminase
Probab=99.86 E-value=7.1e-20 Score=189.12 Aligned_cols=328 Identities=12% Similarity=0.078 Sum_probs=200.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC----C
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD----G 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd----~ 102 (509)
+|.+.+++.+++......... |. .+....+++.+.+.. ..+.|++++++++|++.+++..+.... .
T Consensus 33 ~p~v~~ai~~q~~~~~~~~~~-~~-----~~~~~~la~~l~~~~----~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~ 102 (382)
T PLN00144 33 DPDWVKAVAEQAGTLAHVSNV-YH-----TIPQVELAKRLVASS----FADRVFFCNSGTEANEAAIKFARKYQRVRAPD 102 (382)
T ss_pred CHHHHHHHHHHHHhcCCcccc-cc-----CHHHHHHHHHHHhcC----CCCeEEEeCCcHHHHHHHHHHHHHHHhccCCC
Confidence 589999999999873211111 11 233445555554321 246899999999999999988753210 0
Q ss_pred C-------CCeEEEcCCCChhHHHHHHhcCCEE-EE---EecCCCCCC--CCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 103 K-------KPGVLIPIPQYPLYSASLAEFNMEQ-IG---YYLDESKQW--GLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 103 ~-------~~~Vlv~~p~y~~~~~~~~~~g~~~-~~---v~~~~~~~~--~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
+ +.+|+....+|++....+....... .. .|..+...+ ..|++.|++.+... ++++||+...+|
T Consensus 103 ~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~----~~aavi~eP~q~ 178 (382)
T PLN00144 103 KKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKG----KTAAVFVEPVQG 178 (382)
T ss_pred CccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCC----CeEEEEEccccC
Confidence 0 3479999999998765544332111 00 010000000 12688998888542 688888865599
Q ss_pred CCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 170 PTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 170 PtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
|.|. .++++.+++|.++|++||+++|+||+|..|...+. ..+. +. .++.++ +.+|||.+ | +|+|+
T Consensus 179 ~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~--~~~~-~~-~~~~PD--------i~t~sK~l-~-~G~pi 244 (382)
T PLN00144 179 EGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGY--LWAH-EA-YGVEPD--------IMTLAKPL-A-GGLPI 244 (382)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--Hhhh-hh-cCCCCC--------EEEecccc-c-CCcce
Confidence 9555 34566799999999999999999999999876642 2111 11 122221 55889999 4 89999
Q ss_pred EEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCC
Q psy13922 249 GYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGE 327 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 327 (509)
||++ .++++++.+..... .+...+.+++++ +.+++..+.+
T Consensus 245 g~v~---~~~~~~~~~~~~~~~~T~~~~pl~~aa------------------------------a~a~l~~i~~------ 285 (382)
T PLN00144 245 GAVL---VTEKVASAINPGDHGSTFAGGPLVCNA------------------------------ALAVLDKISK------ 285 (382)
T ss_pred EEEE---EcHHHHhccCCCCCCCCCCCCHHHHHH------------------------------HHHHHHHHhh------
Confidence 9998 78999988754222 333455552222 3333333322
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCe
Q psy13922 328 PSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGI 407 (509)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI 407 (509)
.++.++.+++.+.++ +.+.+.+.+.|.+.-+. ..|+++|+.+.. +... +...+.++||
T Consensus 286 ---~~~~~~~~~~g~~l~---~~l~~~~~~~~~~~~vr-g~G~~~~l~l~~--------------~~~~-~~~~~~~~Gv 343 (382)
T PLN00144 286 ---PGFLASVAKKGEYLR---ELLRRKLGGNPHVKEVR-GVGLLVGIQLDV--------------PAGP-LVDACRDSGL 343 (382)
T ss_pred ---chHHHHHHHHHHHHH---HHHHHHHhhCCCceeee-cCceEEEEEecC--------------ccHH-HHHHHHHCCe
Confidence 223333444555443 33444444444332222 378999987742 1233 3455667899
Q ss_pred EEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--c
Q psy13922 408 CIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--P 485 (509)
Q Consensus 408 ~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~ 485 (509)
.+.|+. .+ . .+|++.. .
T Consensus 344 ~i~~~~----------------------------------------------------~~-~--------~lrl~p~~~~ 362 (382)
T PLN00144 344 LVLTAG----------------------------------------------------KG-D--------VVRLVPPLVI 362 (382)
T ss_pred EEeecC----------------------------------------------------CC-C--------EEEEeCCCcc
Confidence 998752 11 1 7888877 7
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q psy13922 486 QPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 486 ~~~~i~~~~~~l~~~~~~~ 504 (509)
++++|++++++|.+++.++
T Consensus 363 ~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 363 SEAELEQAVEILADCLPAL 381 (382)
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 8999999999999998653
No 200
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=3.8e-19 Score=184.05 Aligned_cols=175 Identities=13% Similarity=0.166 Sum_probs=135.0
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhH----HHH
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY----SAS 120 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~----~~~ 120 (509)
.+++|+.+. ..+|++.+|++++ .+..++++++++++..++..++++|| .|+++.|.|... ...
T Consensus 52 ~y~r~~~p~-~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd----~Vi~~~~~y~~t~~~~~~~ 118 (391)
T TIGR01328 52 IYSRLGNPT-VSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGD----HLISDECLYGCTFALLEHA 118 (391)
T ss_pred ceeCCCCch-HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEecCcchHHHHHHHHH
Confidence 355565443 4789999999983 23467888888999999999999998 999999988654 344
Q ss_pred HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 121 LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 121 ~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
+...|+++..++.+ |++.+++.++. ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|
T Consensus 119 ~~~~G~~~~~vd~~-------d~e~l~~~i~~-----~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~ 183 (391)
T TIGR01328 119 LTKFGIQVDFINMA-------IPEEVKAHIKD-----NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTF 183 (391)
T ss_pred HhcCCeEEEEECCC-------CHHHHHHhhcc-----CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCC
Confidence 55679998888753 68999998876 7999999999999999987 888999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-EEEeeecCCHHHHHHHHHh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG-GYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~-G~v~~~~~~~~~~~~l~~~ 267 (509)
...... .++. . .. -++++|+||.+ |.+|.++ |+++ .+++++++++..
T Consensus 184 a~~~~~-----~~~~-----~-----g~-Divv~S~sK~l-gg~g~~~gG~v~---~~~~li~~l~~~ 231 (391)
T TIGR01328 184 ATPMLT-----NPVA-----L-----GV-DVVVHSATKYI-GGHGDVVAGLIC---GKAELLQQIRMV 231 (391)
T ss_pred chhccC-----Cchh-----c-----CC-CEEEccccccc-cCCCCceEEEEE---cCHHHHHHHHHH
Confidence 864331 1111 1 12 25677999999 5678764 6655 788988888754
No 201
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.85 E-value=1.7e-19 Score=187.91 Aligned_cols=211 Identities=7% Similarity=0.040 Sum_probs=133.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC-----C-
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED-----V- 100 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----g- 100 (509)
+|.|.+++.+.+......... + .......+++.+++++ + .+.+++++++++|+..+++.++.. |
T Consensus 49 ~p~v~~a~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~~~~----~----~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~ 118 (400)
T PTZ00125 49 HPKILAALINQAQKLTLTSRA-F-YNDVLGLAEKYITDLF----G----YDKVLPMNSGAEAGETALKFARKWGYEVKGI 118 (400)
T ss_pred CHHHHHHHHHHHHhccccccc-c-cCHHHHHHHHHHHhCC----C----CCEEEEeCCcHHHHHHHHHHHHHHHHhccCC
Confidence 788999999988763211111 1 1122233444444432 2 368999999999999999987531 0
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhc-CCEEEE---EecCCCC--CCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEF-NMEQIG---YYLDESK--QWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~-g~~~~~---v~~~~~~--~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
...++.|++.+-.|++........ +..... .+..+.. -...|++.|++.++.. ++++|+++.++||+|.+
T Consensus 119 ~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~----~~~~v~~ep~~~~~G~~ 194 (400)
T PTZ00125 119 PENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDP----NVAAFIVEPIQGEAGVI 194 (400)
T ss_pred CCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCC----CeEEEEEcCccCCCCCc
Confidence 001347888888888765443332 211100 0000000 0023899999988622 79999998899999998
Q ss_pred CC-HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 175 LT-KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 175 ~s-~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
++ ++++++|.++|++||+++|+||+|.++.+++. .... . .....+ +++ ++||.+ |.+++|+||++
T Consensus 195 ~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~--~~~~-~-~~~~~p-----d~~---~~sK~l-~~g~~~ig~v~- 260 (400)
T PTZ00125 195 VPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK--LLAH-D-HEGVKP-----DIV---LLGKAL-SGGLYPISAVL- 260 (400)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hhHH-H-hcCCCC-----CEE---EEcccc-cCCCcCcEEEE-
Confidence 86 56799999999999999999999988765531 1111 1 111111 233 568999 43335999998
Q ss_pred ecCCHHHHHHHHHh
Q psy13922 254 INLDPGVKAMLHKS 267 (509)
Q Consensus 254 ~~~~~~~~~~l~~~ 267 (509)
.++++++.+...
T Consensus 261 --~~~~~~~~~~~~ 272 (400)
T PTZ00125 261 --ANDDVMLVIKPG 272 (400)
T ss_pred --EcHHHHhhccCC
Confidence 788998887643
No 202
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.85 E-value=1e-18 Score=180.43 Aligned_cols=177 Identities=18% Similarity=0.248 Sum_probs=136.6
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhH----HHH
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY----SAS 120 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~----~~~ 120 (509)
.+++|+.+. ..++++.++++++ .+.+++++++++++..++.+++++|| +|+++.+.|.+. ...
T Consensus 47 ~y~r~~~p~-~~~le~~la~l~g--------~~~~~~~~sG~~Ai~~al~al~~~Gd----~Vl~~~~~~~~t~~~~~~~ 113 (380)
T TIGR01325 47 VYSRYANPT-VAAFEERIAALEG--------AERAVATATGMSAIQAALMTLLQAGD----HVVASRSLFGSTVGFISEI 113 (380)
T ss_pred ceecCCCch-HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEecCCcchHHHHHHHH
Confidence 345565443 4789999998873 25688899999999999999999998 999998888653 345
Q ss_pred HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 121 LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 121 ~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
++..|.++..++.+ |++.+++.+++ ++++|++++|+||+|...+ +++|.++|+++|+++|+|++|
T Consensus 114 ~~~~g~~v~~v~~~-------d~~~l~~~i~~-----~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~ 178 (380)
T TIGR01325 114 LPRFGIEVSFVDPT-------DLNAWEAAVKP-----NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVF 178 (380)
T ss_pred HHHhCCEEEEECCC-------CHHHHHHhcCC-----CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCC
Confidence 67789999888653 68889888866 7999999999999999976 899999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-EEEeeecCCHHHHHHHHHhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG-GYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~-G~v~~~~~~~~~~~~l~~~~~ 269 (509)
..+... .++ . .+ . .++++|+||.+ |.+|.++ |+++ .++++++.++....
T Consensus 179 ~~~~~~-----~pl-~----~g-----~-Divv~S~sK~l-~g~g~~~gG~vv---~~~~~~~~l~~~~~ 228 (380)
T TIGR01325 179 ATPVLQ-----QPL-K----LG-----A-DVVVYSATKHI-DGQGRVMGGVIA---GSEELMAEVAVYLR 228 (380)
T ss_pred cccccC-----Cch-h----hC-----C-CEEEeecccee-cCCCCeEEEEEE---eCHHHHHHHHHHHH
Confidence 864332 111 1 11 1 35567999999 4577776 5555 78888888876544
No 203
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=6e-19 Score=182.67 Aligned_cols=179 Identities=21% Similarity=0.183 Sum_probs=139.8
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH----H
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA----S 120 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~----~ 120 (509)
.+++|+.+ ...+|++.+++++ | .+++++++|+++|+..++.+++++|| +|+++.|+|..+.. .
T Consensus 58 ~Y~r~~~p-t~~~Le~~lA~l~----g----~~~~l~~~sgt~Ai~~~l~al~~~GD----~Vl~~~~~y~~~~~~~~~~ 124 (394)
T PRK07050 58 RYGLHATP-TSLALAQRLAEIE----G----GRHALLQPSGLAAISLVYFGLVKAGD----DVLIPDNAYGPNRDHGEWL 124 (394)
T ss_pred ccCCCCCH-HHHHHHHHHHHHh----C----CCeEEEeccHHHHHHHHHHHHhCCCC----EEEEecCCcccHHHHHHHH
Confidence 45556443 3477888888887 2 46899999999999999999999998 99999999998664 4
Q ss_pred HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 121 LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 121 ~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
+...|+++..++.. +.+.+++.+++ ++++|++++|+||+|.. .++++|+++|+++|+++|+|++|
T Consensus 125 ~~~~Gi~v~~vd~~-------~~~~l~~~i~~-----~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~ 189 (394)
T PRK07050 125 ARDFGITVRFYDPL-------IGAGIADLIQP-----NTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTY 189 (394)
T ss_pred HHhcCeEEEEECCC-------CHHHHHHhcCC-----CCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCc
Confidence 56679999887632 34678888776 79999999999999754 67999999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
..... ..++. .+ ..++++|+||.++|..++++|++++ .++++.++++..+.
T Consensus 190 a~~~~-----~~~l~-----~G------aDi~v~S~tK~~~g~~~~~gG~v~~--~~~~~~~~~~~~~~ 240 (394)
T PRK07050 190 SAGLA-----FKPFE-----HG------VDISVQALTKYQSGGSDVLMGATIT--ADAELHAKLKLARM 240 (394)
T ss_pred ccccc-----cCHHH-----cC------CeEEEEECCceecCCCCeeEEEEEE--CCHHHHHHHHHHHH
Confidence 76332 11111 11 1466889999997666677998864 68889888876655
No 204
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.85 E-value=2e-18 Score=178.33 Aligned_cols=200 Identities=17% Similarity=0.174 Sum_probs=154.4
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~g 100 (509)
..|.+++..++++.+.+.+ ++.. +++ ...+|+++++++++ .+++++++|+++|+.+++.++ .++|
T Consensus 8 ~~p~~~~~e~~~~~~~l~~---~~~~-~g~--~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~G 73 (379)
T PRK11658 8 SRPAMGDEELAAVKEVLRS---GWIT-TGP--KNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPG 73 (379)
T ss_pred CCCCCCHHHHHHHHHHHHc---CCcc-CCH--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCC
Confidence 5677888889999998887 4443 444 35899999999983 246888999999999999999 7888
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
| +|+++.|+|..+...+...|++++.++.+++ +|.+|++.+++.+++ ++++|+ |+|++|...+ +
T Consensus 74 d----~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~-~~~~d~~~l~~~i~~-----~tkav~---~~~~~G~~~d---~ 137 (379)
T PRK11658 74 D----EVITPSLTWVSTLNMIVLLGATPVMVDVDRD-TLMVTPEAIEAAITP-----RTKAII---PVHYAGAPAD---L 137 (379)
T ss_pred C----EEEECCCcHHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhccc-----CCeEEE---EeCCCCCcCC---H
Confidence 8 9999999999999999999999999998765 467899999999986 789887 5667999866 8
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGV 260 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~ 260 (509)
++|.++|+++|++||+|++|+......+ ... +.. . + .+.||++.. .+++.++|+++. .++++
T Consensus 138 ~~i~~~a~~~gi~vi~D~a~a~g~~~~~-~~~---------g~~--g--~-~~~Sf~~~K-~l~~g~GG~v~~--~~~~~ 199 (379)
T PRK11658 138 DAIRAIGERYGIPVIEDAAHAVGTYYKG-RHI---------GAR--G--T-AIFSFHAIK-NITCAEGGLVVT--DDDEL 199 (379)
T ss_pred HHHHHHHHHcCCeEEEECCCccCCeECC-eec---------CCC--C--C-EEEeCCCCC-cCcccCceEEEE--CCHHH
Confidence 8999999999999999999985332111 111 110 1 1 244666444 345667888763 67899
Q ss_pred HHHHHHhhh
Q psy13922 261 KAMLHKSIS 269 (509)
Q Consensus 261 ~~~l~~~~~ 269 (509)
.++++....
T Consensus 200 ~~~~~~~~~ 208 (379)
T PRK11658 200 ADRLRSLKF 208 (379)
T ss_pred HHHHHHHHH
Confidence 998887654
No 205
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.3e-18 Score=179.90 Aligned_cols=173 Identities=15% Similarity=0.166 Sum_probs=130.7
Q ss_pred CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH----hcCCE
Q psy13922 52 SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA----EFNME 127 (509)
Q Consensus 52 ~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~----~~g~~ 127 (509)
.....+|+++++++++. +..++++++++|+..++.+++++|| +|+++.|+|......+. ..|++
T Consensus 60 ~p~~~~Le~~lA~~~g~--------~~~i~~~sG~~Ai~~~l~all~~Gd----~Vl~~~~~y~~t~~~~~~~~~~~gi~ 127 (388)
T PRK07811 60 NPTRTALEEQLAALEGG--------AYGRAFSSGMAATDCLLRAVLRPGD----HIVIPNDAYGGTFRLIDKVFTRWGVE 127 (388)
T ss_pred CccHHHHHHHHHHHhCC--------CceEEeCCHHHHHHHHHHHHhCCCC----EEEEcCCCchHHHHHHHHhCcCCCeE
Confidence 34568999999999842 2234445668999999999999998 99999999996544433 35777
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccC
Q psy13922 128 QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207 (509)
Q Consensus 128 ~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~ 207 (509)
+..++. .|++.+++.+++ ++++|++++|+||+|...+ +++|+++|+++|+++|+|++|......
T Consensus 128 ~~~~d~-------~d~e~l~~~i~~-----~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~- 191 (388)
T PRK07811 128 YTPVDL-------SDLDAVRAAITP-----RTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ- 191 (388)
T ss_pred EEEeCC-------CCHHHHHHhcCc-----CCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC-
Confidence 776653 379999999876 7999999999999998855 999999999999999999999864321
Q ss_pred CCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 208 GSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.++. . + . -++++|+||.++|..+.++||+++ .++++.+.+...+.
T Consensus 192 ----~p~~-~----g-----a-Divv~S~sK~l~g~~~~~gG~vv~--~~~~l~~~~~~~~~ 236 (388)
T PRK07811 192 ----QPLA-L----G-----A-DVVVHSTTKYIGGHSDVVGGALVT--NDEELDEAFAFLQN 236 (388)
T ss_pred ----Cchh-h----C-----C-cEEEecCceeecCCCCcEEEEEEE--CCHHHHHHHHHHHH
Confidence 1211 1 1 1 366779999995434467899873 56778777765544
No 206
>PRK07505 hypothetical protein; Provisional
Probab=99.85 E-value=1.7e-18 Score=180.42 Aligned_cols=208 Identities=13% Similarity=0.137 Sum_probs=131.2
Q ss_pred CCCHHHHHHHHHHHhccc-CCCcccC--CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc---
Q psy13922 25 RFPDDVKQRAQAVLDGCR-GQSVGSY--TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--- 98 (509)
Q Consensus 25 ~~p~~v~~a~~~~l~~~~-~~~~~~Y--~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--- 98 (509)
+-+|.|++++.+++.+.. ....... .......++++.+++++ + . +.+++++ ++++...+++.+..
T Consensus 60 ~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~~~~s-G~~a~~~ai~~~~~~~~ 130 (402)
T PRK07505 60 DTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G--A--SVLTFTS-CSAAHLGILPLLASGHL 130 (402)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C--C--CEEEECC-hHHHHHHHHHHHHhccc
Confidence 337899999999998632 1111100 01223355666666555 4 1 4444554 55788777766542
Q ss_pred CCCCCCCeEEEcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVL 175 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~ 175 (509)
+++ +..|++.+..|++... .....+.+++.+|. .|++.+++.++. +++++++++|+||+|.++
T Consensus 131 ~~~--~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~-----~~~~~vl~~p~~~~G~~~ 196 (402)
T PRK07505 131 TGG--VPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKT-----NKTVAYVADGVYSMGGIA 196 (402)
T ss_pred CCC--CCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhc-----CCCEEEEEecccccCCcC
Confidence 111 2247777766665321 12223556676664 378999998876 578999999999999998
Q ss_pred CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeec
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN 255 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~ 255 (509)
+ +++|.++|+++|+++|+||+|+...++..........+ +.. ...++++++|+||.+ |.+| ||+++
T Consensus 197 ~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~----~~~-~~d~~i~~~s~sK~~-~~~G---g~~~~-- 262 (402)
T PRK07505 197 P---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSEL----DYR-LNERTIIAASLGKAF-GASG---GVIML-- 262 (402)
T ss_pred C---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHc----CCC-CCCCeEEEEechhhh-hccC---eEEEe--
Confidence 8 78888899999999999999965444321111111111 110 022478889999999 6565 88753
Q ss_pred CCHHHHHHHHHhhh
Q psy13922 256 LDPGVKAMLHKSIS 269 (509)
Q Consensus 256 ~~~~~~~~l~~~~~ 269 (509)
+++++++.+.....
T Consensus 263 ~~~~~~~~~~~~~~ 276 (402)
T PRK07505 263 GDAEQIELILRYAG 276 (402)
T ss_pred CCHHHHHHHHHhCC
Confidence 68899998877544
No 207
>KOG1549|consensus
Probab=99.85 E-value=2.2e-19 Score=179.78 Aligned_cols=197 Identities=23% Similarity=0.266 Sum_probs=154.7
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCccc-C--CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVGS-Y--TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE- 98 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~~-Y--~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~- 98 (509)
...+|+.|++++...+...-.+.... | ....+.++.|+.||++++ .++.+|+||+|+||+++++++.+..
T Consensus 52 t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklIn------Ad~~dIiFts~ATEs~Nlvl~~v~~~ 125 (428)
T KOG1549|consen 52 TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLIN------ADPSDIVFTSGATESNNLVLKGVARF 125 (428)
T ss_pred CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhC------CCCCcEEEeCCchHHHHHHHHHhhcc
Confidence 44568899999988888743333332 4 344568899999999995 6777899999999999999999854
Q ss_pred CCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVL 175 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~ 175 (509)
.+++.+++||+..-.|.... ..++..|++++.+|...+ ...|.+.+++.|+. +++++.|...+|.+|+.+
T Consensus 126 ~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~--~~~d~~~~~~~i~~-----~T~lv~I~~Vnn~~gv~~ 198 (428)
T KOG1549|consen 126 FGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDS--GLVDISKLREAIRS-----KTRLVSIMHVNNEIGVLQ 198 (428)
T ss_pred ccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCcc--ccccHHHHHHhcCC-----CceEEEEEecccCccccc
Confidence 33323448888887777654 455667999999999854 37899999999999 899999999999999999
Q ss_pred CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
| +++|.++|+++++.+++|.+++. +.....+.++..| ..++ |.+|+| |.+| +|++.+
T Consensus 199 P---v~EI~~icr~~~v~v~~DaAQav-----G~i~vDV~eln~D---------~~s~-s~HK~y-gp~~--iGaLYv 255 (428)
T KOG1549|consen 199 P---VKEIVKICREEGVQVHVDAAQAV-----GKIPVDVQELNAD---------FLSI-SAHKIY-GPPG--IGALYV 255 (428)
T ss_pred c---HHHHHHHhCcCCcEEEeehhhhc-----CCccccHHHcCch---------heee-eccccc-CCCc--ceEEEE
Confidence 9 99999999999999999999987 3334555555433 5555 889999 8999 666663
No 208
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.85 E-value=6.7e-19 Score=181.62 Aligned_cols=319 Identities=15% Similarity=0.196 Sum_probs=209.1
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCC---cccCCC--CcchHHHHHHHHHHHhhhcCCCCCC-CcEEEeCCHHHHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQS---VGSYTD--SPGIEIIRRHVAQYISRRDGQPADW-QDVILSAGASDGIKSVLKL 95 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~---~~~Y~~--~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~ 95 (509)
+...+|+.|++++.+.+....... .+.+.. ..-..++|+.++++++ .++ ++|++++|++.+++.++.+
T Consensus 7 ~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg------~~~~~~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 7 GTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG------APPDEEVVFTSNGTEALNAVASS 80 (371)
T ss_dssp SS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT------SSTTEEEEEESSHHHHHHHHHHH
T ss_pred CccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC------Cccccccccccccchhhhhhhhc
Confidence 344568999999999988643222 111111 1234577788888883 455 7999999999999999999
Q ss_pred h---hcCCCCCCCeEEEcCCCChhHH----HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 96 L---IEDVDGKKPGVLIPIPQYPLYS----ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 96 l---~~~gd~~~~~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
+ .++++ +|++..-.|++.. ...+..|+++..++.+.++ .+|++.+++.+.. ++++++++..+
T Consensus 81 l~~~~~~g~----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~--~~~~~~~~~~l~~-----~~~lv~~~~~~ 149 (371)
T PF00266_consen 81 LLNPLKPGD----EVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGG--SLDLEDLEEALNP-----DTRLVSISHVE 149 (371)
T ss_dssp HHHHGTTTC----EEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTS--SCSHHHHHHHHHT-----TESEEEEESBE
T ss_pred ccccccccc----ccccccccccccccccccccccchhhhccccccccc--hhhhhhhhhhhcc-----ccceEEeeccc
Confidence 9 67777 9999998888765 3344679999999887553 7899999999986 89999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 169 NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 169 NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
|.||..++ +++|.++|+++|+++++|.+++..... ..+..+ +.+++ +.|..| +.|.+| +
T Consensus 150 ~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~g~~~-----id~~~~---------~~D~~-~~s~~K-l~gp~G--~ 208 (371)
T PF00266_consen 150 NSTGVRNP---IEEIAKLAHEYGALLVVDAAQSAGCVP-----IDLDEL---------GADFL-VFSSHK-LGGPPG--L 208 (371)
T ss_dssp TTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTTTTSS-------TTTT---------TESEE-EEESTS-TTSSST--E
T ss_pred ccccEEee---eceehhhhhccCCceeEechhcccccc-----cccccc---------cccee-eecccc-cCCCCc--h
Confidence 99999988 899999999999999999998863321 111111 22245 558899 547776 5
Q ss_pred EEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC
Q psy13922 249 GYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 328 (509)
|++. .+++.++++......+........ ...........+++|+.......++..+++
T Consensus 209 g~l~---v~~~~~~~~~p~~~~~~~~~~~~~------------~~~~~~~~~~~~~~GT~~~~~~~~l~~al~------- 266 (371)
T PF00266_consen 209 GFLY---VRPEAIERLRPAKPGGGYLDFPSL------------QEYGLADDARRFEGGTPNVPAIYALNEALK------- 266 (371)
T ss_dssp EEEE---EEHHHHHHHHTSSSSSSTTTHHHH------------HHHCHHSTTTGSSSSS--HHHHHHHHHHHH-------
T ss_pred hhhe---ehhhhhhccccccccccccccccc------------hhcccccccccccccceeeehhhhHHHHHh-------
Confidence 7776 488888888654432221111100 000000111123344444445555555543
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc----CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhh
Q psy13922 329 SYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP----VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLER 404 (509)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~ 404 (509)
+- ....++++.++..++.+++.+.|.+++++.+.. ...+..+.+.++ +. +...+...|++
T Consensus 267 -~~-~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~--~~~~~~~~L~~ 330 (371)
T PF00266_consen 267 -LL-EEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLP------------GS--DADDVVKYLEE 330 (371)
T ss_dssp -HH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEET------------TS--SHHHHHHHHHH
T ss_pred -hh-hccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeec------------CC--CHHHHHHHHhh
Confidence 11 122367788889999999999999998877743 222333333343 22 22235677777
Q ss_pred cCeEEecCCCCC
Q psy13922 405 TGICIVPGAGFG 416 (509)
Q Consensus 405 ~gI~v~pg~~f~ 416 (509)
.||.+..|..+.
T Consensus 331 ~~I~~~~G~~~~ 342 (371)
T PF00266_consen 331 RGIAVSTGSACA 342 (371)
T ss_dssp HTEEEEESTTTC
T ss_pred cCEEEeccCccc
Confidence 799999977655
No 209
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.85 E-value=3.2e-18 Score=173.59 Aligned_cols=324 Identities=15% Similarity=0.158 Sum_probs=222.8
Q ss_pred CHHHHHHHHHHHhcccCCCcc---cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVG---SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~---~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
.+.+++++.++++....+..+ -++...-..+|.+.+|+|+ | .+..++.+++..|...++.+|++++|
T Consensus 55 ~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~----g----~e~al~f~SGy~AN~~~i~~l~~~~d-- 124 (388)
T COG0156 55 HPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL----G----AEAALLFSSGFVANLGLLSALLKKGD-- 124 (388)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh----C----CCcEEEEcccchhHHHHHHHhcCCCc--
Confidence 467999999999985322221 1444444466777777777 3 44566666666788899999999988
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
.|+...-+|.+..+.++..+++++.+.. .|++.||+.+++.... .+.++|++...-...|.+.| |++
T Consensus 125 --li~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp---L~~ 192 (388)
T COG0156 125 --LIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP---LPE 192 (388)
T ss_pred --EEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC---HHH
Confidence 9999999999999999999999999875 3899999999874321 13567777788888999977 999
Q ss_pred HHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHH
Q psy13922 183 IIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKA 262 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~ 262 (509)
|++++++|++++++||+|+...+++. ...+.+.. +-. +....|.++||||.+ |..| ||++ ++..+++
T Consensus 193 l~~L~~ky~a~L~VDEAHa~Gv~G~~--GrG~~e~~---g~~-~~~vdi~~gTlsKAl-Gs~G---g~v~---g~~~~~d 259 (388)
T COG0156 193 LVELAEKYGALLYVDEAHAVGVLGPN--GRGLAEHF---GLE-PEEVDIIVGTLGKAL-GSSG---GYIA---GSAALID 259 (388)
T ss_pred HHHHHHHhCcEEEEEccccccccCCC--CccHHHHh---CCC-CccceEEEEEchhhh-cccC---ceee---CcHHHHH
Confidence 99999999999999999999888642 23333322 110 122367799999999 7666 8887 8999999
Q ss_pred HHHHhhhcc--c-CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 263 MLHKSISAM--L-CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 263 ~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
.+.+....+ + +.++. .++ + ...+++.+ +....
T Consensus 260 ~L~~~ar~~ifStalpP~-~aa-----------------a------------~~~al~~l---------------~~~~~ 294 (388)
T COG0156 260 YLRNRARPFIFSTALPPA-VAA-----------------A------------ALAALRIL---------------EEGPE 294 (388)
T ss_pred HHHHhCCceeccCCCCHH-HHH-----------------H------------HHHHHHHH---------------HhCHH
Confidence 998864422 2 22222 000 0 23333332 22456
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
.+++++++...+.+.+... ++.+.++...+.-++ +..+. ....+...++++ ||++.+......+
T Consensus 295 ~r~~L~~~~~~~~~~~~~~-~~~~~~s~s~I~pv~-~gd~~------------~a~~~s~~l~~~-Gi~v~~i~~PTVp- 358 (388)
T COG0156 295 RRERLQELAAFFRSLLKAL-GLVLLPSESPIIPVI-LGDEE------------RALEASRALLEE-GIYVSAIRPPTVP- 358 (388)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCccCCCCCCeeeeE-eCCHH------------HHHHHHHHHHHC-CeeEeeecCCCCC-
Confidence 6777777777777666655 666655566555432 33222 133334455555 9999986655552
Q ss_pred CccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHH
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKF 497 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l 497 (509)
.|+..+|+++. +++++|+.+++.|
T Consensus 359 ------------------------------------------------------~gtarlRi~lta~ht~~~I~~l~~~l 384 (388)
T COG0156 359 ------------------------------------------------------KGTARLRITLTAAHTEEDIDRLAEAL 384 (388)
T ss_pred ------------------------------------------------------CCcceEEEEecCCCCHHHHHHHHHHH
Confidence 23338999988 8999998888887
Q ss_pred HHH
Q psy13922 498 REF 500 (509)
Q Consensus 498 ~~~ 500 (509)
.++
T Consensus 385 ~~~ 387 (388)
T COG0156 385 SEV 387 (388)
T ss_pred Hhh
Confidence 764
No 210
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.84 E-value=3.6e-18 Score=176.29 Aligned_cols=200 Identities=19% Similarity=0.246 Sum_probs=152.1
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~g 100 (509)
..|.+.+..++++.+.+.+ +.. |+. .++++++++++.+.+| .+++++|+|+++|+.+++..+ .++|
T Consensus 5 ~~p~~~~~~~~~~~~~l~~---~~~--~g~----~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~G 71 (375)
T PRK11706 5 NKPPVVGTELDYIQQAMSS---GKL--CGD----GGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPG 71 (375)
T ss_pred CCCCCCHHHHHHHHHHHHc---CCc--cCC----CHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCC
Confidence 4567778888888888887 332 321 3356666666655544 368999999999999887766 6788
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
| +|+++.|+|..+...+...|++++.++.+++ +|.+|++.+++.+++ ++++|+++ |++|...+ +
T Consensus 72 d----~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~-----~tk~i~~~---~~~G~~~~---~ 135 (375)
T PRK11706 72 D----EVIMPSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITP-----KTRAIVPV---HYAGVACE---M 135 (375)
T ss_pred C----EEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCC-----CCeEEEEe---CCCCCccC---H
Confidence 8 9999999999999999999999999998865 478999999999876 79998876 46898755 7
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc--cccCCCCCCeeEEEeeecCCH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS--KGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~G~~Glr~G~v~~~~~~~ 258 (509)
++|.++|+++|++||+|++|+.+...++ .+...+ + .+.+.||+ |.++ +|.++++++ .++
T Consensus 136 ~~i~~la~~~~i~vIeD~a~a~g~~~~~---~~~g~~----~-------~~~~~Sf~~~K~l~--~g~gG~~~~---~~~ 196 (375)
T PRK11706 136 DTIMALAKKHNLFVVEDAAQGVMSTYKG---RALGTI----G-------HIGCFSFHETKNYT--AGEGGALLI---NDP 196 (375)
T ss_pred HHHHHHHHHcCCEEEEECccccccccCC---eeeecC----c-------CEEEEeCCCCcccc--ccCCeEEEE---CCH
Confidence 8999999999999999999988763222 111111 0 12233544 9994 798888886 789
Q ss_pred HHHHHHHHhhh
Q psy13922 259 GVKAMLHKSIS 269 (509)
Q Consensus 259 ~~~~~l~~~~~ 269 (509)
++.++++.++.
T Consensus 197 ~~~~~~~~~~~ 207 (375)
T PRK11706 197 ALIERAEIIRE 207 (375)
T ss_pred HHHHHHHHHHH
Confidence 99998887765
No 211
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=3.5e-18 Score=175.83 Aligned_cols=175 Identities=16% Similarity=0.202 Sum_probs=136.3
Q ss_pred CCCC--cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----H
Q psy13922 49 YTDS--PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL----A 122 (509)
Q Consensus 49 Y~~~--~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~ 122 (509)
|+.. .....|++++|++.. .+++++++|+++|+..++.+++++|| +|++++|.|.++...+ .
T Consensus 55 Y~r~~npt~~~Le~~iA~le~--------~~~~~~~~sG~~Ai~~~l~all~~GD----~Vvv~~~~Y~~t~~l~~~~l~ 122 (394)
T PRK09028 55 YGRRGTPTHFAFQAAIVELEG--------GAGTALYPSGAAAISNALLSFLKAGD----HLLMVDSCYEPTRDLCDKILK 122 (394)
T ss_pred ecCCCCchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEECCCcHHHHHHHHHhhh
Confidence 6552 344689999998862 24789999999999999999999999 9999999998876543 5
Q ss_pred hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCc
Q psy13922 123 EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQD 202 (509)
Q Consensus 123 ~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~ 202 (509)
..|.++..++.. +.+.+++++++ ++++|++++|+||||.+ .++++|+++|+++|+++|+|++|..
T Consensus 123 ~~Gi~v~~v~~~-------~~e~l~~~l~~-----~TklV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 123 GFGIETTYYDPM-------IGEGIRELIRP-----NTKVLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hcceEEEEECCC-------CHHHHHHhcCc-----CceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 578888776532 45778888876 79999999999999887 5599999999999999999999976
Q ss_pred ccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 203 NVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
... ..++ . .+. -++++|.+|.++|.+++-.|+++ .++++.+.+.....
T Consensus 188 p~~-----~~Pl-~----~Ga------Divv~S~tK~l~Gh~d~~~G~~~---~~~~~~~~l~~~~~ 235 (394)
T PRK09028 188 PIN-----SRPF-E----MGV------DISIQAATKYIVGHSDVMLGTAT---ANEKHWDQLREHSY 235 (394)
T ss_pred ccc-----CCcc-c----cCc------eEEEEeCCeEecCCCCEEEEEEE---CCHHHHHHHHHHHH
Confidence 321 1121 1 111 36688999999988888899775 67777777765433
No 212
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=7.1e-19 Score=180.10 Aligned_cols=236 Identities=14% Similarity=0.137 Sum_probs=161.6
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF 124 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~ 124 (509)
.+++|+.+ ...+|+++++++. ..+++++++|+++|+.+++. ++++|| +|+++.+.|......+...
T Consensus 47 ~Y~R~~~p-~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD----~VI~~~~~yg~~~~~~~~~ 112 (364)
T PRK07269 47 DYTRTKNP-TRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGS----KVVAVRDLYGGSFRWFNQQ 112 (364)
T ss_pred ceeCCCCc-cHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCC----EEEEecCCcCchHHHHHHH
Confidence 35556544 3488999999998 35789999999999999984 668888 9999999988655443322
Q ss_pred CCE-EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcc
Q psy13922 125 NME-QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDN 203 (509)
Q Consensus 125 g~~-~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~ 203 (509)
..+ -+.+ .|..|++.++++++. ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|...
T Consensus 113 ~~~~~~~~------~~~~d~~~l~~~i~~-----~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~ 178 (364)
T PRK07269 113 EKEGRFHF------TYANTEEELIAAIEE-----DTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSP 178 (364)
T ss_pred HhcCcEEE------EecCCHHHHHHhcCc-----CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccc
Confidence 110 0111 134589999999986 7999999999999999875 999999999999999999997542
Q ss_pred cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcc-cCcchhhhhcc
Q psy13922 204 VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAM-LCPTVLALVSL 282 (509)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~ 282 (509)
.+ ..++. . + . -++++|++|.++|..++=.|+++. .++++.++++..+... ...+...
T Consensus 179 ~~-----~~pl~-~----g-----a-Divv~S~tK~l~g~~d~~gG~v~~--~~~~l~~~~~~~~~~~G~~~s~~~---- 236 (364)
T PRK07269 179 IY-----QRPIE-L----G-----A-DIVLHSATKYLSGHNDVLAGVVVT--NDLELYEKLFYNLNTTGAVLSPFD---- 236 (364)
T ss_pred cc-----CCchh-h----C-----C-cEEEecCceeccCCCcccceEEEe--CcHHHHHHHHHHHHHhCCCCCHHH----
Confidence 21 11221 1 1 1 366779999995433344677652 5788888887554321 1222220
Q ss_pred ccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy13922 283 PQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMS 362 (509)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 362 (509)
+..++..+- .+....+...++...+.+.|++.|.+.
T Consensus 237 -----------------------------a~l~~~~L~---------------tL~~r~~~~~~na~~~a~~L~~~p~v~ 272 (364)
T PRK07269 237 -----------------------------SYLLMRGLK---------------TLSLRMERSTANAQEVVAFLKKSPAVK 272 (364)
T ss_pred -----------------------------HHHHHcCCC---------------cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 111222221 166667777888889999999888754
Q ss_pred -e-ccCCceeEEee
Q psy13922 363 -C-NPVQGAMYAFP 374 (509)
Q Consensus 363 -~-~~~~~g~~~~~ 374 (509)
+ +|+.||++.+.
T Consensus 273 ~v~ypg~gg~~sf~ 286 (364)
T PRK07269 273 EVLYTGKGGMISFK 286 (364)
T ss_pred EEeCCCcCcEEEEE
Confidence 4 47778887764
No 213
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.84 E-value=5.2e-18 Score=175.54 Aligned_cols=205 Identities=17% Similarity=0.135 Sum_probs=151.1
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~g 100 (509)
..|.+++..++++.+++.+ +.+. ++ .+..+++++++++++. ++.++++|+++|+..++.++ .++|
T Consensus 4 ~~~~~~~~~~~~v~~~~~~---~~~~-~g--~~~~~le~~la~~~g~--------~~~v~~~sgt~al~~~l~al~~~~G 69 (380)
T TIGR03588 4 GRQSIDQDDIDAVVEVLKS---DFLT-QG--PTVPAFEEALAEYVGA--------KYAVAFNSATSALHIACLALGVGPG 69 (380)
T ss_pred CcCCCCHHHHHHHHHHHhc---CCcc-CC--hhHHHHHHHHHHHHCC--------CeEEEEcCHHHHHHHHHHHcCCCCC
Confidence 4577888889999888877 4333 33 3458899999999942 34566778899999999998 7888
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
| .|+++.|+|..+...+...|++++.++++++ ++.+|++.+++.+++. +.+++++|+++ |++|...+ +
T Consensus 70 d----~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~-~~~~t~~v~~~---~~~G~~~~---~ 137 (380)
T TIGR03588 70 D----RVWTTPITFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAA-KGKLPKAIVPV---DFAGKSVD---M 137 (380)
T ss_pred C----EEEeCCcchHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcc-cCCCceEEEEe---CCCCccCC---H
Confidence 8 9999999999999999999999999998764 4689999999999831 00168888854 46888765 8
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc--cccCCCCCCeeEEEeeecCCH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS--KGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~G~~Glr~G~v~~~~~~~ 258 (509)
++|.++|+++|++||+|++++....-.+ .... . . + .. -+++.|++ |.+. .| ..|++++ .++
T Consensus 138 ~~i~~l~~~~~~~lI~D~a~a~g~~~~~-~~~g--~-~-~------~~-d~~~~S~~~~K~~~--~~-~GG~v~~--~~~ 200 (380)
T TIGR03588 138 QAIAALAKKHGLKIIEDASHALGAEYGG-KPVG--N-C-R------YA-DATVFSFHPVKIIT--TA-EGGAVTT--NDE 200 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCcccCccCC-EeCC--C-c-c------cc-ceEEEecCCCCccc--cc-CceEEEE--CCH
Confidence 9999999999999999999987532111 1111 0 0 0 01 23344765 8883 34 5676653 788
Q ss_pred HHHHHHHHhhh
Q psy13922 259 GVKAMLHKSIS 269 (509)
Q Consensus 259 ~~~~~l~~~~~ 269 (509)
++.++++..+.
T Consensus 201 ~~~~~~~~~~~ 211 (380)
T TIGR03588 201 ELAERMRLLRS 211 (380)
T ss_pred HHHHHHHHHHH
Confidence 99988876654
No 214
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.84 E-value=7.2e-18 Score=174.90 Aligned_cols=326 Identities=10% Similarity=0.082 Sum_probs=207.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcch----HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh-----
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGI----EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI----- 97 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~----~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~----- 97 (509)
.|.++++..+++++.+.+..+ -....|. .+|.+++|++++ .+..++.+++..|...++.++.
T Consensus 118 ~p~v~~a~~~ai~~yG~g~~g-Srl~~G~~~~h~~LE~~LA~f~g--------~e~all~sSGy~AN~~~i~aL~~~~~~ 188 (476)
T PLN02955 118 HPTISNAAANAAKEYGMGPKG-SALICGYTTYHRLLESSLADLKK--------KEDCLVCPTGFAANMAAMVAIGSVASL 188 (476)
T ss_pred CHHHHHHHHHHHHHcCCCCCC-cCccccChHHHHHHHHHHHHHHC--------CCcEEEECChHHHHHHHHHHHhhcccc
Confidence 578999999999885433222 1123344 567777777772 4567777777778778887773
Q ss_pred -----cCCCCCCCeEEEcCCCChhHHHHHHhc----CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 98 -----EDVDGKKPGVLIPIPQYPLYSASLAEF----NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 98 -----~~gd~~~~~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
.+..++++.|+...-+|.+....++.. ++++..++.+ |++.|++.++...+ +.++|++....
T Consensus 189 ~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-------D~~~Le~~L~~~~~--~~~~Vv~EgV~ 259 (476)
T PLN02955 189 LAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-------DMYHLNSLLSSCKM--KRKVVVTDSLF 259 (476)
T ss_pred ccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-------CHHHHHHHHHhCCC--CceEEEEeCCC
Confidence 111112336777788888888888766 5777776643 89999999976422 34566667779
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 169 NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 169 NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
++.|.+.+ +++|.++|++||+++|+||+|+.+.++.. ......... +. ....|+++||||.+ |. +.
T Consensus 260 SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~--G~G~~e~~g-~~----~di~ii~~TLsKA~-G~---~G 325 (476)
T PLN02955 260 SMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGEN--GGGVAEEFN-CE----ADVDLCVGTLSKAA-GC---HG 325 (476)
T ss_pred CCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCC--CCcHHHHhC-CC----CCCcEEEEeCccch-hc---cC
Confidence 99999988 88899999999999999999998887542 223332211 11 12357788999998 54 45
Q ss_pred EEEeeecCCHHHHHHHHHhhhc--ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCC
Q psy13922 249 GYSEVINLDPGVKAMLHKSISA--MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPG 326 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 326 (509)
|+++ +++++++.++..... ++...++.+.+. ..+++..+..
T Consensus 326 Gfi~---gs~~~~~~l~~~~~~~ifStalpp~~aaa-----------------------------~laal~l~~~----- 368 (476)
T PLN02955 326 GFIA---CSKKWKQLIQSRGRSFIFSTAIPVPMAAA-----------------------------AYAAVVVARK----- 368 (476)
T ss_pred ceee---cHHHHHHHHHHhCCCCeecccccHHHHHH-----------------------------HHHHHHHHhc-----
Confidence 9987 788899988865442 222222211110 2233332211
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 327 EPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
-...++.++++.+++.+.+ |+.+ .+.++. +.+..+. ....+.+.|.+.|
T Consensus 369 ----------~~~~r~~L~~n~~~fr~~~----G~~~---~sPI~p-I~ig~~~-------------~a~~~~~~L~~~G 417 (476)
T PLN02955 369 ----------EKWRRKAIWERVKEFKALS----GVDI---SSPIIS-LVVGNQE-------------KALKASRYLLKSG 417 (476)
T ss_pred ----------CHHHHHHHHHHHHHHHHhc----CCCC---CCCEEE-EEeCCHH-------------HHHHHHHHHHHCC
Confidence 1235567777777776632 4442 233332 2233222 2222456677789
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-- 484 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-- 484 (509)
|++.+......+ .+ +..+||++.
T Consensus 418 i~v~~i~yPtVP-----------------------------------------------~g--------~~rLRi~lsA~ 442 (476)
T PLN02955 418 FHVMAIRPPTVP-----------------------------------------------PN--------SCRLRVTLSAA 442 (476)
T ss_pred CEEEEECCCCCC-----------------------------------------------CC--------CceEEEeeCCC
Confidence 999976655552 23 338999998
Q ss_pred cChHHHHHHHHHHHHHHHHHHhh
Q psy13922 485 PQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
+++++|+.+++.|.++.+....+
T Consensus 443 Ht~edId~lv~~L~~~~~~~~~~ 465 (476)
T PLN02955 443 HTTEDVKKLITALSSCLDFDNTA 465 (476)
T ss_pred CCHHHHHHHHHHHHHHHhhhcce
Confidence 89999999999999887654433
No 215
>PLN02624 ornithine-delta-aminotransferase
Probab=99.84 E-value=1.9e-18 Score=183.02 Aligned_cols=222 Identities=10% Similarity=0.064 Sum_probs=140.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC-----CC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED-----VD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----gd 101 (509)
+|.|.+++.+++.+...... .|. .....+|.+.+++++ + .+.+++++++++|+..+++..+.. |.
T Consensus 93 ~p~v~~ai~~ql~~~~~~~~-~~~-~~~~~~la~~L~~~~----~----~~~~~f~~SGseA~e~AlklAr~~~~~~~g~ 162 (474)
T PLN02624 93 HPKIIKALTEQAEKLTLSSR-AFY-NDKFPEFAEYLTSMF----G----YDMVLPMNTGAEGVETAIKLARKWGYEKKGI 162 (474)
T ss_pred CHHHHHHHHHHHHhcCCccc-ccC-CHHHHHHHHHHHhhc----C----CCeEEEeCChHHHHHHHHHHHHHHHHhhcCC
Confidence 79999999999988321111 122 233355666666553 2 368999999999999999876542 11
Q ss_pred -CCCCeEEEcCCCChhHHHHHHhcCCEEE-E---EecCCC---CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 102 -GKKPGVLIPIPQYPLYSASLAEFNMEQI-G---YYLDES---KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 102 -~~~~~Vlv~~p~y~~~~~~~~~~g~~~~-~---v~~~~~---~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
+.+..|+...-+|++............. . .|..+. -. ..|++.+++.++.. ..++++|++..++|++|.
T Consensus 163 ~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~l~~~--~~~iaaiiiEpv~~~~G~ 239 (474)
T PLN02624 163 PKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVD-FGDLDALEKIFEED--GDRIAAFLFEPIQGEAGV 239 (474)
T ss_pred CCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeC-CCCHHHHHHHHHhC--CCCEEEEEECCccCCCCC
Confidence 0123677788888887544433221110 0 000000 00 12688999888742 126889999999999999
Q ss_pred CCCHH-HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 174 VLTKE-NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 174 ~~s~~-~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
+++++ ++++|.++|++||+++|+||+|.++..++. ..+.. ..+.. .+++ ++||.+ |.+++++|+++
T Consensus 240 v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~--~~a~~--~~~i~-----pDiv---~lsK~l-ggG~~pigav~ 306 (474)
T PLN02624 240 VIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGK--MLACD--WEEVR-----PDVV---ILGKAL-GGGVIPVSAVL 306 (474)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcc--hhhHH--hcCCC-----CCEE---Eecccc-cCCCCcceeee
Confidence 87665 699999999999999999999998765541 11111 11111 1233 468999 65669999998
Q ss_pred eecCCHHHHHHHHHhhh-cccCcchh
Q psy13922 253 VINLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
.++++++.+..... .+.+.+.+
T Consensus 307 ---~~~~i~~~~~~~~~~~T~~g~pl 329 (474)
T PLN02624 307 ---ADKDVMLCIKPGEHGSTFGGNPL 329 (474)
T ss_pred ---ecHHHHhHhccCCcCCCCCCCHH
Confidence 67888877754333 22344555
No 216
>KOG1411|consensus
Probab=99.84 E-value=2.6e-19 Score=171.70 Aligned_cols=333 Identities=18% Similarity=0.183 Sum_probs=244.7
Q ss_pred HHHHHHHhhcCCCCC-----------CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCC
Q psy13922 7 LSLQVLALVSLPQLF-----------DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPAD 75 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~-----------~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~ 75 (509)
++-+.++....|..+ |.|..-+.|+++-++.+.. ...-.|.|-.|++++.+..+++........+.
T Consensus 41 GVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~---~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik 117 (427)
T KOG1411|consen 41 GVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASL---SLDKEYLPITGLAEFNKLSAKLALGDNSPVIK 117 (427)
T ss_pred cHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhh---cccchhccccchHHHHHHHHHHhhcCCchhhh
Confidence 455555555555554 5666678888887777774 33335999999999999999998543222234
Q ss_pred CCcEEEe--CCHHHHHHHHHHHhhc--CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 76 WQDVILS--AGASDGIKSVLKLLIE--DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 76 ~~~i~~t--~G~~~al~~~~~~l~~--~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
.++|+.+ =++|.++......+.. ++. .|.+|+|+|.++...++.+|+.+..+.-.+...-++|.+.+.+.+.
T Consensus 118 ~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~----~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~ 193 (427)
T KOG1411|consen 118 EKRIVTVQTLSGTGALRVGAEFLARFYPSR----DIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLG 193 (427)
T ss_pred ccceeEEEeccCcchhhHHHHHHHhhcccc----ceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHh
Confidence 4455443 4566777766666543 444 8999999999999999999999988876555556899999888777
Q ss_pred hhhccCCceEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCcee
Q psy13922 152 EARKHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMEL 230 (509)
Q Consensus 152 ~~~~~~~~~~ivi~-~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 230 (509)
+. +.-..|++. ..|||||+-.++|+|++|.++.++.+.+-+.|-+|..|..++-..-.-...++.+. +.++
T Consensus 194 ~~---p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~-----g~~~ 265 (427)
T KOG1411|consen 194 EA---PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVED-----GHEI 265 (427)
T ss_pred cC---CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHc-----CCce
Confidence 74 122344454 55999999999999999999999999999999999999875421111122233332 4458
Q ss_pred EEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH----Hhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhc
Q psy13922 231 ASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH----KSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDG 305 (509)
Q Consensus 231 i~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (509)
++.-|++|.. |+.|-|+|.+.+++.+++...++. .+.. .+.+|+..|..+++.+|.|+++
T Consensus 266 ~laQSyAKNM-GLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l-------------- 330 (427)
T KOG1411|consen 266 LLAQSYAKNM-GLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDL-------------- 330 (427)
T ss_pred Eeehhhhhhc-chhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHH--------------
Confidence 8899999999 999999999988888877665553 3333 5678888877777777766554
Q ss_pred ccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC--C-CCeeccCCceeEEeecCCCCHHH
Q psy13922 306 CRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSI--E-GMSCNPVQGAMYAFPQMKLPAKA 382 (509)
Q Consensus 306 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~-g~~~~~~~~g~~~~~~~~~~~~~ 382 (509)
+.+|..++..+..++...+..|.+.|... + .+..+..+-|+|.+-
T Consensus 331 ------------------------~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fT-------- 378 (427)
T KOG1411|consen 331 ------------------------KNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFT-------- 378 (427)
T ss_pred ------------------------HHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeec--------
Confidence 57788889999999999999999999874 2 255566788888873
Q ss_pred HHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 383 IAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
|+++++ +..+.+++.|++.
T Consensus 379 -------gl~peQ--v~~l~ke~~iYmT 397 (427)
T KOG1411|consen 379 -------GLNPEQ--VDWLTKEYHIYLT 397 (427)
T ss_pred -------CCCHHH--HHHHHhhheeeec
Confidence 444443 6888899999987
No 217
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=2.4e-18 Score=178.16 Aligned_cols=172 Identities=20% Similarity=0.273 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH----HHHHhcCCEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS----ASLAEFNMEQIG 130 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~----~~~~~~g~~~~~ 130 (509)
..++++.+++++ | .. +.+++++| +.++..++. +.++|| +|+++.|.|.+.. ..++..|+++..
T Consensus 56 ~~~le~~lA~l~----g--~~-~~v~~~sG-~~ai~~~l~-~l~~Gd----~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~ 122 (390)
T PRK08064 56 REALEDIIAELE----G--GT-KGFAFASG-MAAISTAFL-LLSKGD----HVLISEDVYGGTYRMITEVLSRFGIEHTF 122 (390)
T ss_pred HHHHHHHHHHHh----C--CC-CeEEECCH-HHHHHHHHH-HhCCCC----EEEEccCccchHHHHHHHHHHHcCCEEEE
Confidence 467888888887 3 22 45555555 678888886 677888 9999999887533 455678999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCc
Q psy13922 131 YYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSK 210 (509)
Q Consensus 131 v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~ 210 (509)
++.. |++.+++.+++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+...
T Consensus 123 v~~~-------d~~~l~~~l~~-----~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---- 183 (390)
T PRK08064 123 VDMT-------NLEEVAQNIKP-----NTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ---- 183 (390)
T ss_pred ECCC-------CHHHHHHhcCC-----CceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----
Confidence 8753 68899888876 7999999999999999976 888999999999999999999764321
Q ss_pred cccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhccc
Q psy13922 211 FYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAML 272 (509)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~ 272 (509)
.++ . .+ . .++++|+||.++|.+|+..|++++ +++++++.++..+..+.
T Consensus 184 -~~~-~----~g-----~-Divv~S~tK~~~G~~~~laG~~v~--~~~~~~~~l~~~~~~~g 231 (390)
T PRK08064 184 -KPL-D----LG-----A-DVVLHSATKFLAGHSDVLAGLAVV--KDEELAQKLYFLQNSFG 231 (390)
T ss_pred -Cch-h----hC-----C-cEEEeecceeccCCccceeEEEEe--CCHHHHHHHHHHHHhcC
Confidence 111 1 11 1 356779999996666777787763 67889999887776443
No 218
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=1.9e-18 Score=180.60 Aligned_cols=334 Identities=14% Similarity=0.140 Sum_probs=205.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.+.+++.+++.+. ....+.... .+....+++.+.+.... -..+.+++++++++|++.+++..+.... +..
T Consensus 58 ~p~v~~ai~~ql~~~---~~~~~~~~~--~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e~AlklAr~~tg--r~~ 129 (421)
T PRK06777 58 HPKVVAAVRQQLDQF---THTAYQIVP--YASYVTLAERINALAPI-DGPAKTAFFTTGAEAVENAVKIARAYTG--RPG 129 (421)
T ss_pred CHHHHHHHHHHHhhc---ccccccccC--ChHHHHHHHHHHHhCCC-CCCceEEEeCCcHHHHHHHHHHHHHhhC--CCe
Confidence 688999999999883 222121111 22334444444433210 1235899999999999999998765432 457
Q ss_pred EEEcCCCChhHHHHHHhc-CCE-------------EEEEecCCCCCCC----CCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 107 VLIPIPQYPLYSASLAEF-NME-------------QIGYYLDESKQWG----LPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~~-------------~~~v~~~~~~~~~----~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
|+....+|++....+... +.. +..++.... ... -+++.+++.++......++.+|++...+
T Consensus 130 ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~ 208 (421)
T PRK06777 130 VIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNE-LHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQ 208 (421)
T ss_pred EEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc-ccCcCHHHHHHHHHHHHHhccCCCceEEEEECCcc
Confidence 999999999876554432 210 111111110 001 1256677777531111267888887678
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe
Q psy13922 169 NPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR 247 (509)
Q Consensus 169 NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr 247 (509)
+..|. +++++.+++|.++|++||+++|+||+|.+|.+++ .+.+...+ +..+ +++ ++||.+ | +|+|
T Consensus 209 ~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g--~~~~~~~~--~~~p-----Div---~~sK~l-~-~G~p 274 (421)
T PRK06777 209 GEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTG--KLFAMEYY--DVKP-----DLI---TMAKSL-G-GGMP 274 (421)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCC--chhhhhhc--CCCC-----CEE---eeehhh-c-CCCc
Confidence 88886 6899999999999999999999999999987654 22222221 1111 233 789999 6 8999
Q ss_pred eEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCC
Q psy13922 248 GGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPG 326 (509)
Q Consensus 248 ~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 326 (509)
+||++ .++++++.+..... .+.+.+.+++.+ +.+++..+.
T Consensus 275 igav~---~~~~i~~~~~~~~~~~T~~~~p~~~aa------------------------------a~a~L~~~~------ 315 (421)
T PRK06777 275 ISAVV---GRAEVMDAPAPGGLGGTYAGNPLAVAA------------------------------ALAVLDVIA------ 315 (421)
T ss_pred eEEEE---EcHHHHhccCCCCCCCCCCcCHHHHHH------------------------------HHHHHHHHH------
Confidence 99998 78899888764332 344456653222 333333221
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHH---
Q psy13922 327 EPSYEQFSREKQSVLDSLKQRAKMVADTFNSI----EGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAF--- 399 (509)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 399 (509)
-+.+.+.++++.+++.+.|+++ |.+..+.+.|.++.+ .+..+. .+. ++..++.
T Consensus 316 ----------~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i-~~~~~~--------~~~-~~~~~~~~l~ 375 (421)
T PRK06777 316 ----------EEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAV-EFNDPQ--------TGK-PSPEFTRQYQ 375 (421)
T ss_pred ----------hccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEE-EEecCc--------cCC-ccHHHHHHHH
Confidence 1344555556666666666553 444556778888764 232221 011 1222222
Q ss_pred HHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeE
Q psy13922 400 ELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHF 479 (509)
Q Consensus 400 ~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (509)
..+.+.||.+.|+..|+. ++
T Consensus 376 ~~~~~~Gv~i~~~~~~g~------------------------------------------------------------~l 395 (421)
T PRK06777 376 RQALEEGLLLLSCGVHGN------------------------------------------------------------VI 395 (421)
T ss_pred HHHHhCCeEEeecCCCCC------------------------------------------------------------EE
Confidence 335568999998765443 78
Q ss_pred EEEe--ecChHHHHHHHHHHHHHHH
Q psy13922 480 RTTI--LPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 480 Rls~--~~~~~~i~~~~~~l~~~~~ 502 (509)
|++. ..++++|++++++|.+++.
T Consensus 396 r~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 396 RFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 8887 4899999999999998863
No 219
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.83 E-value=2.1e-18 Score=180.42 Aligned_cols=225 Identities=12% Similarity=0.104 Sum_probs=144.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.+.+++.+++.+. .+..+... ..+....+++.+.+.... ...+.+++++++++|++.+++..+.-.. +.+
T Consensus 58 ~p~v~~ai~~ql~~~---~~~~~~~~--~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~e~AlklAr~~tg--r~~ 129 (421)
T PRK09792 58 HPDLVAAVEQQLQQF---THTAYQIV--PYESYVTLAEKINALAPV-SGQAKTAFFTTGAEAVENAVKIARAHTG--RPG 129 (421)
T ss_pred CHHHHHHHHHHHHhc---cCcccCcc--CCHHHHHHHHHHHHhCCC-CCCceEEEeCChHHHHHHHHHHHHHhcC--CCe
Confidence 789999999999872 22212111 123344555555433221 1125799999999999999998875432 447
Q ss_pred EEEcCCCChhHHHHHHhc-CC-------------EEEEEecCCCCCCCC----CHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 107 VLIPIPQYPLYSASLAEF-NM-------------EQIGYYLDESKQWGL----PISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~~~~----d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
|+....+|++........ |. .+..+|...... .+ +++.+++.+++.....++++|++...+
T Consensus 130 ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq 208 (421)
T PRK09792 130 VIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQ 208 (421)
T ss_pred EEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhccCCCceEEEEEcccc
Confidence 999999999875433222 21 122222211100 12 246777777631111268899987669
Q ss_pred CCCCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe
Q psy13922 169 NPTGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR 247 (509)
Q Consensus 169 NPtG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr 247 (509)
+|+|..+ +++.+++|.++|++||+++|+||++.+|.+.+ .+.+...+ ...+ + +.+|||.+ | +|+|
T Consensus 209 ~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G--~~~a~~~~--~~~p-----D---i~t~gK~l-~-~G~p 274 (421)
T PRK09792 209 GEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG--KLFAMDHY--ADKP-----D---LMTMAKSL-A-GGMP 274 (421)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC--chhHHHhc--CCCC-----c---EEEeehhh-c-CCCc
Confidence 9999755 99999999999999999999999999987764 23333322 1111 1 45889999 5 8999
Q ss_pred eEEEeeecCCHHHHHHHHHhhh-cccCcchh
Q psy13922 248 GGYSEVINLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 248 ~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
+||++ .++++++.+..... .+...+.+
T Consensus 275 igav~---~~~~i~~~~~~~~~~~T~~gnpl 302 (421)
T PRK09792 275 LSGVV---GNANIMDAPAPGGLGGTYAGNPL 302 (421)
T ss_pred eEEEE---EcHHHHhccCCCCcCCCCCCCHH
Confidence 99998 78999887754322 33445555
No 220
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.83 E-value=6.5e-18 Score=172.74 Aligned_cols=190 Identities=16% Similarity=0.193 Sum_probs=140.9
Q ss_pred HHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCCCCCCCeEEE
Q psy13922 31 KQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDVDGKKPGVLI 109 (509)
Q Consensus 31 ~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv 109 (509)
++++.+.+.+ +.+. +. ....++++.++++++ .+++++++|+++++..++..+ .++|| +|++
T Consensus 2 ~~~~~~~~~~---~~~~-~~--~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd----~vl~ 63 (352)
T cd00616 2 LEAVEEVLDS---GWLT-LG--PKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGD----EVIV 63 (352)
T ss_pred hHHHHHHHHc---CCcc-CC--HHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCC----EEEe
Confidence 3566677766 4333 33 345889999999983 256888889999999999998 47787 9999
Q ss_pred cCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Q psy13922 110 PIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR 189 (509)
Q Consensus 110 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~ 189 (509)
+.++|..+...+...|++++.++.++. ++.+|++.+++.+++ ++++|+++ |++|...+ +++|.++|++
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~-----~~~~v~~~---~~~G~~~~---~~~i~~l~~~ 131 (352)
T cd00616 64 PSFTFVATANAILLLGATPVFVDIDPD-TYNIDPELIEAAITP-----RTKAIIPV---HLYGNPAD---MDAIMAIAKR 131 (352)
T ss_pred CCcchHHHHHHHHHcCCeEEEEecCCC-cCCcCHHHHHHhcCc-----CCeEEEEE---CCCCCcCC---HHHHHHHHHH
Confidence 999999999999999999999998752 578899999998865 78998876 46898876 7888899999
Q ss_pred CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc--cccCCCCCCeeEEEeeecCCHHHHHHHHHh
Q psy13922 190 EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS--KGYMGECGLRGGYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 190 ~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~G~~Glr~G~v~~~~~~~~~~~~l~~~ 267 (509)
+|+++|+|++|+......+ ..+... . .+.+.|++ |.+ + +-++|++++ .++++.+.++..
T Consensus 132 ~~i~li~D~a~~~g~~~~~---~~~~~~----------~-d~~~~S~~~~K~~-~--~~~gg~~~~--~~~~~~~~~~~~ 192 (352)
T cd00616 132 HGLPVIEDAAQALGATYKG---RKVGTF----------G-DAGAFSFHPTKNL-T--TGEGGAVVT--NDEELAERARLL 192 (352)
T ss_pred cCCeEEEECCCCCCCeECC---EEcccC----------c-ceeEEcCCCCCCC-c--ccCceEEEE--CCHHHHHHHHHH
Confidence 9999999999975432211 011000 0 23344665 887 3 335677763 667888887765
Q ss_pred hh
Q psy13922 268 IS 269 (509)
Q Consensus 268 ~~ 269 (509)
..
T Consensus 193 ~~ 194 (352)
T cd00616 193 RN 194 (352)
T ss_pred HH
Confidence 43
No 221
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=5.8e-18 Score=174.80 Aligned_cols=177 Identities=16% Similarity=0.210 Sum_probs=133.5
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH---H
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---A 122 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---~ 122 (509)
+.+|+.+ ...+|++.++++++ .+++++++|+++|+..++.+++++|| +|+++.|+|.++...+ .
T Consensus 47 y~r~~np-~~~~lE~~lA~l~g--------~~~~l~~~sG~~Ai~~~l~~ll~~GD----~Vlv~~~~y~~~~~~~~~~~ 113 (385)
T PRK08574 47 YSREENP-TLRPLEEALAKLEG--------GVDALAFNSGMAAISTLFFSLLKAGD----RVVLPMEAYGTTLRLLKSLE 113 (385)
T ss_pred EECCCCc-cHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCC----EEEEcCCCchhHHHHHHHhh
Confidence 3444433 45889999999983 35788889999999999999999998 9999999999887665 4
Q ss_pred hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCc
Q psy13922 123 EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQD 202 (509)
Q Consensus 123 ~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~ 202 (509)
..|+++..+. +|++.+++.+++. ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..
T Consensus 114 ~~g~~v~~~~--------~d~~~l~~~i~~~----~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~ 178 (385)
T PRK08574 114 KFGVKVVLAY--------PSTEDIIEAIKEG----RTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFAT 178 (385)
T ss_pred ccCcEEEEEC--------CCHHHHHHhcCcc----CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCc
Confidence 4577776542 3678888888653 6899999999999999998 78999999999999999999964
Q ss_pred ccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe-eEEEeeecCCHHHHHHHHHhhh
Q psy13922 203 NVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR-GGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr-~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
... ..++. .+. .++++|+||.++| +|-. .|++++ .++++.++++..+.
T Consensus 179 ~~~-----~~~l~-----~Ga------Divv~S~sK~l~g-~~d~~gG~vi~--~~~~~~~~~~~~~~ 227 (385)
T PRK08574 179 PLL-----YRPLR-----HGA------DFVVHSLTKYIAG-HNDVVGGVAVA--WSGEFLEELWEWRR 227 (385)
T ss_pred ccc-----CChhh-----hCC------cEEEeeCceeecC-CCCceeEEEEE--CcHHHHHHHHHHHH
Confidence 321 11211 111 3667799999953 5544 565553 67888888776554
No 222
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.83 E-value=6.2e-18 Score=175.50 Aligned_cols=174 Identities=14% Similarity=0.171 Sum_probs=132.5
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC----hhHHHHH
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY----PLYSASL 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y----~~~~~~~ 121 (509)
+++|+.+. ..+|++.+|++.+ .++++++++++.|+..++.++.++|| +|+++...| ..+...+
T Consensus 64 Y~r~~~p~-~~~le~~lA~l~g--------~~~al~~~sG~~Ai~~~l~all~~Gd----~Vl~~~~~~~~t~~~~~~~~ 130 (403)
T PRK07810 64 YSRYGNPT-VSMFEERLRLIEG--------AEACFATASGMSAVFTALGALLGAGD----RLVAARSLFGSCFVVCNEIL 130 (403)
T ss_pred eeCCCCch-HHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHHHHhCCCC----EEEEccCCcchHHHHHHHHH
Confidence 56666554 5789999999883 34788888888999999999999998 999887554 4455667
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
+..|++++.++. .|++.+++++++ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|.
T Consensus 131 ~~~G~~v~~vd~-------~d~~~l~~ai~~-----~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a 195 (403)
T PRK07810 131 PRWGVETVFVDG-------EDLSQWEEALSV-----PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFA 195 (403)
T ss_pred HHcCcEEEEECC-------CCHHHHHHhcCc-----CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCC
Confidence 778999999863 278999999887 7999999999999999986 9999999999999999999998
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-EEEeeecCCHHHHH-HHHHh
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG-GYSEVINLDPGVKA-MLHKS 267 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~-G~v~~~~~~~~~~~-~l~~~ 267 (509)
..... .++ +.+ . -++++|++|.++ ..|.++ |+++ .+++.+. .++..
T Consensus 196 ~~~~~-----~~~-----~~g-----a-Divv~S~tK~l~-g~g~~~gG~v~---~~~~~~~~~l~~~ 243 (403)
T PRK07810 196 TPLLQ-----RGL-----PLG-----A-DVVVYSGTKHID-GQGRVLGGAIL---GDREYIDGPVQKL 243 (403)
T ss_pred ccccC-----Chh-----hcC-----C-cEEEccCCceec-CCcCceeEEEE---eChHHHHHHHHHH
Confidence 64432 111 111 1 355779999994 578776 6665 5555444 45543
No 223
>PRK05968 hypothetical protein; Provisional
Probab=99.82 E-value=1.3e-17 Score=172.54 Aligned_cols=177 Identities=13% Similarity=0.114 Sum_probs=129.9
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH----HH
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS----AS 120 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~----~~ 120 (509)
.+.+|+.+. ..+|++.++++++ .+..+++++++.|+..++.+++++|| +|+++.+.|.+.. ..
T Consensus 56 ~Y~r~~~p~-~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~al~al~~~Gd----~Vl~~~~~y~~t~~~~~~~ 122 (389)
T PRK05968 56 IYSRGDNPT-VRAFEEMLAKLEG--------AEDARGFASGMAAISSTVLSFVEPGD----RIVAVRHVYPDAFRLFETI 122 (389)
T ss_pred cccCCCChh-HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEeCCCchHHHHHHHHH
Confidence 344554433 4789999999883 12345556667899999999999998 9999999998743 45
Q ss_pred HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 121 LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 121 ~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
+...|+++..++.. |++.+++.+ . ++++|++++|+||++.. .++++|+++|+++|+++|+|++|
T Consensus 123 ~~~~G~~v~~vd~~-------d~~~l~~~i-~-----~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~ 186 (389)
T PRK05968 123 LKRMGVEVDYVDGR-------DEEAVAKAL-P-----GAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSW 186 (389)
T ss_pred HHHcCceEEEeCCC-------CHHHHHHhc-c-----cCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCC
Confidence 66679999888632 788998887 3 68999998777765544 78999999999999999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
....+.. ++. .+ . .++++|+||.++|.++++.|+++ .+++++++++....
T Consensus 187 a~~~~~~-----p~~-----~g-----~-Divv~S~tK~l~g~~~~~gG~i~---~~~~~~~~l~~~~~ 236 (389)
T PRK05968 187 ASPVFQR-----PIT-----LG-----V-DLVIHSASKYLGGHSDTVAGVVA---GSKEHIARINAEAY 236 (389)
T ss_pred cchhccC-----chh-----cC-----C-cEEEeeccccccCCCCeEEEEEE---ECHHHHHHHHHHHH
Confidence 7654321 111 11 1 35567999999543446788887 78888888876543
No 224
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=7.4e-18 Score=169.72 Aligned_cols=261 Identities=14% Similarity=0.175 Sum_probs=187.2
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh-cCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-EDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~g 100 (509)
..|.+-+..++++.+.+++ +++. .++.. .++.+++++|++ ..+.+.++++|.|+.++++++. ++|
T Consensus 9 ~~p~i~~~e~~~v~~vl~s---g~i~-~G~~v--~~FE~~~ae~~G--------~k~ava~~sgT~AL~laL~al~ig~G 74 (374)
T COG0399 9 SRPSIGEEELAAVQEVLKS---GWLT-GGPFV--RRFEQAFAEYLG--------VKYAVAVSSGTAALHLALLALAIGPG 74 (374)
T ss_pred CCCCcchHHHHHHHHHHHc---CCee-cChHH--HHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHhcCCCCC
Confidence 4566778899999999999 7877 35544 789999999983 5678888999999999999764 778
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe-CCCCCCCCCCCHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII-NPGNPTGQVLTKEN 179 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~-~p~NPtG~~~s~~~ 179 (509)
| .||++..+|....+.+...|++++.++++++ .|.+|++.+|++|++ ++|+|+.. -..+| .+
T Consensus 75 D----eVI~ps~TfvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~-----~tKAIipVhl~G~~-------~d 137 (374)
T COG0399 75 D----EVIVPSFTFVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITP-----RTKAIIPVHLAGQP-------CD 137 (374)
T ss_pred C----EEEecCCchHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHccc-----CCeEEEEehhccCC-------CC
Confidence 7 9999999999999999999999999999976 578999999999998 79999964 44555 35
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec--ccccCCCCCCeeEEEeeecCC
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC--SKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~G~~Glr~G~v~~~~~~ 257 (509)
++.|.++|++||++||+|.+++......+. ..-++ . .+.+.|| +|.+. +| -.|.++. .+
T Consensus 138 m~~i~~la~~~~l~vIEDaAqa~Ga~y~gk---~vGt~----------G-d~~~fSF~~~K~it--tg-EGGav~t--nd 198 (374)
T COG0399 138 MDAIMALAKRHGLPVIEDAAQAHGATYKGK---KVGSF----------G-DIGAFSFHATKNLT--TG-EGGAVVT--ND 198 (374)
T ss_pred HHHHHHHHHHcCCeEEEEcchhccCeecCc---ccccc----------c-ceEEEEecCCCCcc--cc-CceEEEe--CC
Confidence 999999999999999999999875533221 11111 0 2334455 69994 77 6777754 89
Q ss_pred HHHHHHHHHhhhcccCcch-hhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 258 PGVKAMLHKSISAMLCPTV-LALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 258 ~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
+++.++++.++........ .-. ...+.-++. .+.+ .|+|+... .++.
T Consensus 199 ~ela~k~~~lr~hG~~~~~~~~y-----~~~~~G~N~------------rm~~--iqAAigl~-------------QL~~ 246 (374)
T COG0399 199 EELAEKARSLRNHGLSRDAVFKY-----LHEELGYNY------------RLTE--IQAAIGLA-------------QLER 246 (374)
T ss_pred HHHHHHHHHHHHhCcCCCccccc-----eeeeccccc------------CHHH--HHHHHHHH-------------HHHH
Confidence 9999999887762221110 000 000000100 0000 33443322 3344
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeec
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCN 364 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 364 (509)
++++.+.-++..+.+.+.|.+++++.+.
T Consensus 247 l~~~~~~R~~~a~~Y~~~l~~~~~~~~p 274 (374)
T COG0399 247 LDEINERRREIAQIYAEALKGLPGITLP 274 (374)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 7777788888888888999988776654
No 225
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=8.2e-18 Score=173.46 Aligned_cols=168 Identities=11% Similarity=0.168 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----HHhcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----LAEFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~~~~g~~~~~v 131 (509)
.++++.+++++ | .++++++++++.++..++. ++++|| +|+++.+.|.++... +...|++++.+
T Consensus 50 ~~le~~la~l~----g----~~~~l~~~sG~~al~~~l~-ll~~Gd----~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v 116 (378)
T TIGR01329 50 TALESLLAKLD----K----ADRAFAFSSGMAALDVITR-LLNNGD----EIIAGDDLYGGTDRLLTQVVPRSGVVVVHV 116 (378)
T ss_pred HHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHH-HhCCCC----EEEEcCCCchHHHHHHHHHHHHcCcEEEEe
Confidence 45666666655 4 2566777777789988776 778888 999999999886553 45679999988
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
+.. |++.+++.+++ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|.... ..
T Consensus 117 d~~-------d~~~le~~i~~-----~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~-----~~ 176 (378)
T TIGR01329 117 DTT-------DLDKVKAALGP-----KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL-----LC 176 (378)
T ss_pred CCC-------CHHHHHHhcCc-----CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc-----cC
Confidence 753 78999998876 7999999999999999987 9999999999999999999985421 11
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.++ .. + . -++++|++|.++|..++..|++++ .++.+.+++...+.
T Consensus 177 ~~l-~~----g-----~-Di~v~S~tK~l~G~~~~~~G~v~~--~~~~~~~~~~~~~~ 221 (378)
T TIGR01329 177 NPL-EL----G-----A-DIVYHSATKFLAGHSDVMAGVLAV--KGEEIAKKVYFLQN 221 (378)
T ss_pred Chh-hc----C-----C-cEEEEecceeccCCccceeEEEEe--CcHHHHHHHHHHHH
Confidence 222 11 1 1 356779999886655688999873 56777777776554
No 226
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=4.8e-18 Score=169.31 Aligned_cols=330 Identities=12% Similarity=0.110 Sum_probs=218.3
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC-CCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD-GKK 104 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd-~~~ 104 (509)
-+|.+++++.+++.+.-..+.. |. .+.+.++++.|.+..+ ..+.|+++++++||++.+++..++-+. +++
T Consensus 59 ~hP~iv~al~~Q~~kl~h~sn~-~~-----~~~~~~la~~L~~~s~---~~d~vff~NSGaEA~EaAiKlARk~~~~~~k 129 (404)
T COG4992 59 CHPALVEALKEQAEKLWHVSNL-FY-----NEPQAELAEKLVELSP---FADRVFFCNSGAEANEAALKLARKYTGDPEK 129 (404)
T ss_pred CCHHHHHHHHHHHHHhhhcccc-cC-----ChHHHHHHHHHHhhCc---cccEEEEcCCcHHHHHHHHHHHHHHcCCCCC
Confidence 3799999999988883222222 22 2244455555543322 378999999999999999999876543 456
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEE----ecCCCCCC--CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC-CCCH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGY----YLDESKQW--GLPISELERSITEARKHCNPRAIVIINPGNPTGQ-VLTK 177 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~~--~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~-~~s~ 177 (509)
.+||....+|++-....-..+.+...- |+.+.-.+ --|++.+++++++ ++.+|++..-+...|+ ..++
T Consensus 130 ~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~-----~taAvivEPIQGEgGV~~~~~ 204 (404)
T COG4992 130 SKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDE-----DTAAVIVEPIQGEGGVIPAPP 204 (404)
T ss_pred cEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhcc-----CeEEEEEecccCCCCCCCCCH
Confidence 789999999997654443333222110 22111000 1289999999999 7999999988999997 6677
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+.++.+.++|++||+++|.||++.++..+| ++.....+ .+.++ +.++.|.+ | .|+++|.++ ++
T Consensus 205 ~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG--k~fA~e~~--gV~PD--------I~tlaK~L-g-GG~PigA~l---a~ 267 (404)
T COG4992 205 EFLKALRELCDEHGALLILDEVQTGLGRTG--KLFAYEHY--GVEPD--------ILTLAKAL-G-GGFPIGAML---AT 267 (404)
T ss_pred HHHHHHHHHHHHhCeEEEEeccccCCCccc--hHHHHHHh--CCCCC--------EEEeeccc-c-CCccceeeE---Ec
Confidence 899999999999999999999999998876 34444433 23332 44679999 6 899999998 56
Q ss_pred HHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 258 PGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 258 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
+.+.+.+..... .+.+.|.+++++ +.++++.+.+
T Consensus 268 ~~~~~~~~~G~HgSTfGGNpLacAv------------------------------~~a~l~~l~~--------------- 302 (404)
T COG4992 268 EEIASAFTPGDHGSTFGGNPLACAV------------------------------ALAVLEVLLE--------------- 302 (404)
T ss_pred hhhhhcCCCCcccCCCCcCHHHHHH------------------------------HHHHHHHHcc---------------
Confidence 666666654433 456777776666 6666666654
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC-CCeecc--CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIE-GMSCNP--VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
+.+.+..++.-+++.+.|+++. .+.++. ..-|.++-+++..+. ...+ +.+.+.+.|+.+.+..
T Consensus 303 -e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~------------~a~~-~~~~~~~~gvL~~~a~ 368 (404)
T COG4992 303 -EGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY------------RARD-IVRALREEGVLVLPAG 368 (404)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc------------cHHH-HHHHHHHCCeEEecCC
Confidence 3344445555555555555531 111221 123445545554221 0223 4566677899988522
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHH
Q psy13922 414 GFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLK 491 (509)
Q Consensus 414 ~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~ 491 (509)
.. .+|+.-. .++++|+
T Consensus 369 ------------------------------------------------------~~--------ViR~~PpL~i~~eei~ 386 (404)
T COG4992 369 ------------------------------------------------------PN--------VIRFLPPLVITEEEID 386 (404)
T ss_pred ------------------------------------------------------CC--------eEEecCCccCCHHHHH
Confidence 11 6777644 8999999
Q ss_pred HHHHHHHHHHHHHHhh
Q psy13922 492 AMLEKFREFHEEFLAK 507 (509)
Q Consensus 492 ~~~~~l~~~~~~~~~~ 507 (509)
+++++|.++++++..+
T Consensus 387 ~~~~~l~~~l~~~~~~ 402 (404)
T COG4992 387 EALDALERALAAASAR 402 (404)
T ss_pred HHHHHHHHHHHHhhhc
Confidence 9999999999887654
No 227
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.81 E-value=1.4e-17 Score=176.96 Aligned_cols=210 Identities=14% Similarity=0.217 Sum_probs=148.3
Q ss_pred CCCC--CCHHHHHHHHHHHhcccCCCcccC---CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHH--HH
Q psy13922 22 DDPR--FPDDVKQRAQAVLDGCRGQSVGSY---TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSV--LK 94 (509)
Q Consensus 22 ~~~~--~p~~v~~a~~~~l~~~~~~~~~~Y---~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~--~~ 94 (509)
|.+. .|+.+.+++.+.-. +..++.| +..+|..+++.++++++.+.+|.+ ...+..++|+.+.+..+ ++
T Consensus 76 G~~~~~~~p~i~~~~~~~~~---~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r 150 (481)
T PRK04366 76 GSCTMKYNPKINEKVARLPG---FAELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIR 150 (481)
T ss_pred cccCCCCCHHHHHHHHhCcc---hhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHH
Confidence 5455 48888888765421 1244558 456799999999999999998853 33455566666555433 22
Q ss_pred -HhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 95 -LLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 95 -~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
.+.++||.++++|+++.|.|..+...++..|++++.++.++ ++.+|++.|++.+.+ ++++|++++|| |||.
T Consensus 151 ~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~--~~~~D~e~L~~~i~~-----~t~~V~v~~Pn-~tG~ 222 (481)
T PRK04366 151 AYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNE--DGLVDLEALKAAVGE-----DTAALMLTNPN-TLGL 222 (481)
T ss_pred HHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCC--CCCcCHHHHHhhccc-----CCeEEEEeCCC-Cccc
Confidence 23456654566999999999999999999999999999864 358899999999977 79999999988 9996
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC----CCeeE
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC----GLRGG 249 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~----Glr~G 249 (509)
. ..++++|+++|+++|+++|+|.++.....+ . .+.. +. +.+++ ++|.+|.+ |.| |-.+|
T Consensus 223 ~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g-~---~~~~----~~-----GaD~~-~~~~hK~l-~~P~g~Ggp~~G 285 (481)
T PRK04366 223 F--ERNILEIAEIVHEAGGLLYYDGANLNAILG-K---ARPG----DM-----GFDVV-HLNLHKTF-STPHGGGGPGSG 285 (481)
T ss_pred c--chHHHHHHHHHHHcCCEEEEEecChhhhcc-c---CCcc----cc-----CCCEE-EEechhhc-CCCCCCCCCCee
Confidence 4 357999999999999999999998532111 0 1111 11 12244 55889998 544 33467
Q ss_pred EEeeecCCHHHHHHH
Q psy13922 250 YSEVINLDPGVKAML 264 (509)
Q Consensus 250 ~v~~~~~~~~~~~~l 264 (509)
++. ..+++.+.+
T Consensus 286 ~l~---~~~~~~~~l 297 (481)
T PRK04366 286 PVG---VKEELAPFL 297 (481)
T ss_pred eee---ehhhhHhhC
Confidence 776 355565554
No 228
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=1.2e-17 Score=175.52 Aligned_cols=225 Identities=13% Similarity=0.080 Sum_probs=137.7
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+........| ......++.+.+++++ + -..+.+++++++++|...+++..+.-.. ++.
T Consensus 61 ~p~v~~a~~~q~~~~~~~~~~~~-~~~~~~~la~~L~~~~----~--~~~~~v~f~~SGseA~e~AlklAr~~tg--r~~ 131 (433)
T PRK08117 61 HPKVVQAIKEQADKLMHGPSGVI-YYESILKLAEELAEIT----P--GGLDCFFFSNSGAEAIEGALKLAKHVTK--RPY 131 (433)
T ss_pred CHHHHHHHHHHHHhccCcccccc-CCHHHHHHHHHHHHhC----C--CCCCEEEEeCcHHHHHHHHHHHHHHhcC--CCe
Confidence 68899999999987322111112 1222234444444433 1 1235899999999999999997654321 347
Q ss_pred EEEcCCCChhHHHHHHhc-C--C-----------EEEEEecCCCC--CCC--------CCHHHHHHHHHhhhccCCceEE
Q psy13922 107 VLIPIPQYPLYSASLAEF-N--M-----------EQIGYYLDESK--QWG--------LPISELERSITEARKHCNPRAI 162 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g--~-----------~~~~v~~~~~~--~~~--------~d~~~L~~~i~~~~~~~~~~~i 162 (509)
|+...-.|++........ + . .+..+|..... .+. -|++.+++.++......++.+|
T Consensus 132 ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aav 211 (433)
T PRK08117 132 IISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAV 211 (433)
T ss_pred EEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 888888888865443211 1 0 01222221100 001 1456677766542111257788
Q ss_pred EEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 163 VIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 163 vi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
++.......|. ..+++++++|.++|++||+++|+||+|.+|..++. ......+ ++.++ +.++||.+
T Consensus 212 i~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~--~~~~~~~--gv~pD--------i~t~sK~l- 278 (433)
T PRK08117 212 IIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGE--WFAAQTF--GVVPD--------IMTIAKGI- 278 (433)
T ss_pred EECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcccc--chhHhhc--CCCCC--------Eeehhhhc-
Confidence 87656666676 56899999999999999999999999998766542 2111111 12111 45899999
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchh
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
| +|+|+|+++ .++++++.+..... .+.+.+.+
T Consensus 279 g-~G~pigav~---~~~~i~~~~~~~~~~~T~~~np~ 311 (433)
T PRK08117 279 A-SGLPLSAVV---ASKELMEQWPLGSHGTTFGGNPV 311 (433)
T ss_pred c-CCCcceeEE---EcHHHHhhccCCCCCCCCCcCHH
Confidence 6 899999998 78898887753222 23344555
No 229
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=5.4e-17 Score=167.23 Aligned_cols=177 Identities=19% Similarity=0.235 Sum_probs=127.1
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH----HH
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA----SL 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~----~~ 121 (509)
+.+|+.+. ...|++.++++++ ....+++++ ++.++..++ .++++|| +|+++.|.|.+... .+
T Consensus 44 y~r~~~p~-~~~Le~~lA~l~g-------~~~~~~~~s-G~aai~~~~-~~l~~Gd----~Viv~~~~y~~~~~~~~~~~ 109 (377)
T PRK07671 44 YSRTGNPT-RAALEELIAVLEG-------GHAGFAFGS-GMAAITAVM-MLFSSGD----HVILTDDVYGGTYRVMTKVL 109 (377)
T ss_pred cCCCCChH-HHHHHHHHHHHhC-------CCceEEeCC-HHHHHHHHH-HHhCCCC----EEEECCCccchHHHHHHHHH
Confidence 44444332 4778888888873 123455445 567887665 5778888 99999999985433 34
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
...|++++.++. .|++.+++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|.
T Consensus 110 ~~~G~~v~~v~~-------~d~~~l~~ai~~-----~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~ 174 (377)
T PRK07671 110 NRFGIEHTFVDT-------SNLEEVEEAIRP-----NTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFM 174 (377)
T ss_pred hcCCeEEEEECC-------CCHHHHHHhcCC-----CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCC
Confidence 557999998863 278999999976 7999999999999999866 8889999999999999999997
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
...+. .++ .. + . .++++|+||.+.|.++.-.|++++ .++++++++...+.
T Consensus 175 ~~~~~-----~p~-~~----g-----~-Divv~S~sK~l~G~~~~~~G~~v~--~~~~l~~~~~~~~~ 224 (377)
T PRK07671 175 TPYWQ-----SPI-SL----G-----A-DIVLHSATKYLGGHSDVVAGLVVV--NSPELAEDLHFVQN 224 (377)
T ss_pred ccccC-----Chh-hh----C-----C-eEEEecCcccccCCccceeEEEEe--CcHHHHHHHHHHHH
Confidence 53321 111 11 1 1 466789999995444445666653 67888888877665
No 230
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.81 E-value=1.5e-17 Score=173.51 Aligned_cols=192 Identities=15% Similarity=0.157 Sum_probs=126.5
Q ss_pred CHHHHHHHHHHHhcccCCCc-ccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSV-GSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~-~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
|..+.+++.+.+........ ..|....+...+.+++.+ + +.+| .++++|++|+|+|++++.++.++.++++ +++
T Consensus 40 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g--~~~~~v~~~~~~t~~l~~~~~~~~~~~~-~~~ 114 (406)
T TIGR01814 40 PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVG--AKEDEVVVMNTLTINLHLLLASFYKPTP-KRY 114 (406)
T ss_pred cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccC--CCCCcEEEeCCchHHHHHHHHHhcCCcC-Ccc
Confidence 88899999888765321111 111101111222222222 1 3335 5788999999999999999999866653 123
Q ss_pred eEEEcCCCChhHH----HHHHhcCCEE----EEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 106 GVLIPIPQYPLYS----ASLAEFNMEQ----IGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 106 ~Vlv~~p~y~~~~----~~~~~~g~~~----~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
.|++....|.... ..++..|+++ +.++.+. .+.+|++.+++.++... +++++|++++++|.||..++
T Consensus 115 ~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~--~g~~~~~~l~~~~~~~~--~~t~lv~~~~v~~~tG~~~~- 189 (406)
T TIGR01814 115 KILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPRE--EETLRLEDILDTIEKNG--DDIAVILLSGVQYYTGQLFD- 189 (406)
T ss_pred EEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCC--CCccCHHHHHHHHHhcC--CCeEEEEEeccccccceecC-
Confidence 6888888888733 3445678887 4454433 34678999998886311 27899999999999999998
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
+++|.++|+++|+++++|++++.... ...+.. . +.+++ +.|.+|++.|.||
T Consensus 190 --~~~i~~~~~~~g~~~~vD~aq~~G~~-----~id~~~----~-----gvD~~-~~s~hK~l~g~pG 240 (406)
T TIGR01814 190 --MAAITRAAHAKGALVGFDLAHAVGNV-----PLDLHD----W-----GVDFA-CWCTYKYLNAGPG 240 (406)
T ss_pred --HHHHHHHHHHcCCEEEEEcccccCCc-----cccccc----C-----CCCEE-EEcCccccCCCCC
Confidence 89999999999999999999987322 122211 1 22244 5588998743456
No 231
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=3.2e-17 Score=172.16 Aligned_cols=225 Identities=12% Similarity=0.067 Sum_probs=141.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+.. +. .......+.+.++++.|.+..+. .-+.++++++++||++.+++..+.-.. +..
T Consensus 59 ~p~v~~Ai~~ql~~~~---~~--~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGsEAve~AlklAr~~tg--r~~ 129 (443)
T PRK08360 59 NPRVVKAIKEQTDKLI---HY--TPIYGFPVEPLLLAEKLIEIAPG--DNPKVSFGLSGSDANDGAIKFARAYTK--RRK 129 (443)
T ss_pred CHHHHHHHHHHHHhcc---Cc--cccccCcHHHHHHHHHHHHhCCC--CCCEEEEcCCHHHHHHHHHHHHHHhcC--CCe
Confidence 7899999999998722 11 11111133445555555443321 225899999999999999998765432 457
Q ss_pred EEEcCCCChhHHHHHHh-cCC------------EEEEEecCCC--CCCC--------CCHHHHHHHHHhhhccCCceEEE
Q psy13922 107 VLIPIPQYPLYSASLAE-FNM------------EQIGYYLDES--KQWG--------LPISELERSITEARKHCNPRAIV 163 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~--~~~~--------~d~~~L~~~i~~~~~~~~~~~iv 163 (509)
|+.....|++....+.. .|. .+..+|.... ..+. -+++.+++.++......++++|+
T Consensus 130 ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi 209 (443)
T PRK08360 130 ILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALF 209 (443)
T ss_pred EEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEE
Confidence 88888888886533222 121 1222221110 0011 12345566665311112688988
Q ss_pred EeCCCCCCCCCCC-HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 164 IINPGNPTGQVLT-KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 164 i~~p~NPtG~~~s-~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
+...+||+|.+++ ++++++|.++|++||+++|+||+|.+|.+.+. +.+.... ++.+ +++ ++||.+ |
T Consensus 210 ~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~--~~a~~~~--~~~p-----Dii---tlsK~l-~ 276 (443)
T PRK08360 210 AEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGK--WFAIEHF--GVEP-----DII---TLGKPL-G 276 (443)
T ss_pred ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--chhhhhc--CCCC-----CEE---Eecccc-c
Confidence 8767899998776 66899999999999999999999999876542 2222211 2222 143 679999 6
Q ss_pred CCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchh
Q psy13922 243 ECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 243 ~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
+|+|+||++ .++++++.+..... .+.+.+.+
T Consensus 277 -~G~pigav~---~~~~i~~~~~~~~~~~T~~~~p~ 308 (443)
T PRK08360 277 -GGLPISATI---GRAEIMDSLPPLAHAFTLSGNPV 308 (443)
T ss_pred -CCceeEEEE---EcHHHHhhhcCCCCCCCCCcCHH
Confidence 899999998 78899988864422 23344444
No 232
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.80 E-value=5.9e-17 Score=168.50 Aligned_cols=219 Identities=12% Similarity=0.073 Sum_probs=138.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----C-C
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----V-D 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----g-d 101 (509)
+|.+.+++.+++... .+. +... ..+...++++.+.+..+ ..+.+++++++++|++.+++..+.- | +
T Consensus 58 ~p~v~~ai~~q~~~~---~~~--~~~~-~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~ 128 (408)
T PRK04612 58 DPDLVAALTEQAGKL---WHT--SNVF-YSAPPLKLAEELVTASR---FAEKVFLCNSGTEANEAAIKLVRKWASSQGRP 128 (408)
T ss_pred CHHHHHHHHHHHHhc---ccc--cccc-CCHHHHHHHHHHHhhCC---CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCC
Confidence 688999999998872 111 1111 12334455555543322 1268999999999999999887642 2 1
Q ss_pred CCCCeEEEcCCCChhHHHHHHhc-CCEEEE---EecCCC---CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEF-NMEQIG---YYLDES---KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~-g~~~~~---v~~~~~---~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
+++..|+....+|++....+... |..... -+..+. -. ..|++.+++.+.. +..+.++..|.+++|-+
T Consensus 129 ~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~~~~-----~~~aavi~eP~~~~gg~ 202 (408)
T PRK04612 129 ADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVD-FNDVEALEAAMAG-----GDVAAVMLEPIQGEGGV 202 (408)
T ss_pred CCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcC-CCCHHHHHHhhCC-----CCEEEEEECCccCCCCC
Confidence 13457999999999876544332 211110 011100 01 1378888888854 34555566677777755
Q ss_pred CC--HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 175 LT--KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 175 ~s--~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
++ ++++++|.++|++||+++|+||+|..|...+ .. +.....+. +..+.+|||.+ | +|+|+||++
T Consensus 203 ~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G--~~--~a~~~~~~--------~pdi~t~~K~l-~-~G~piga~~ 268 (408)
T PRK04612 203 MPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG--TL--FAHWQEQV--------TPDIVTLAKAL-G-GGFPIGAML 268 (408)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC--ch--hhhhhcCC--------CCCEEEEcchh-c-CCCceEEEE
Confidence 44 6799999999999999999999999876654 12 11111111 23366889999 5 899999998
Q ss_pred eecCCHHHHHHHHHhhh-cccCcchh
Q psy13922 253 VINLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
.++++++.+..... .+.+.+.+
T Consensus 269 ---~~~~~~~~~~~~~~~~t~~~~p~ 291 (408)
T PRK04612 269 ---AGPKVAETMQFGAHGTTFGGNPL 291 (408)
T ss_pred ---ECHHHHhhhcCCCcCCCCCCCHH
Confidence 67888887765322 23344555
No 233
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=2.3e-17 Score=172.46 Aligned_cols=224 Identities=11% Similarity=0.072 Sum_probs=138.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+....... +.+ .+....+++.+.+..+.. ..+.++++++++||++.+++..+.... +..
T Consensus 58 ~p~v~~ai~~ql~~l~~~~~~-~~~----~~~~~~la~~l~~~~p~~-~~~~v~f~~SGseA~e~AlklAr~~tg--r~~ 129 (425)
T PRK07495 58 HPRVIAAVKAQLDRFTHTCHQ-VVP----YENYVRLAERLNALVPGD-FAKKTIFVTTGAEAVENAVKIARAATG--RSA 129 (425)
T ss_pred CHHHHHHHHHHHhhccCcccC-ccC----CHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHHHHHHHHHHhhC--CCe
Confidence 688999999999873211111 112 223344454444332211 125899999999999999998765422 447
Q ss_pred EEEcCCCChhHHHHHHhc-CC-------------EEEEEecCCCCCCCCC----HHHHHHHHHhhhccCCceEEEEe-CC
Q psy13922 107 VLIPIPQYPLYSASLAEF-NM-------------EQIGYYLDESKQWGLP----ISELERSITEARKHCNPRAIVII-NP 167 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~~~~d----~~~L~~~i~~~~~~~~~~~ivi~-~p 167 (509)
|+.....|++........ |. .+..+|..... .+.+ ++.+++.+.......++++|++. ..
T Consensus 130 ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~ 208 (425)
T PRK07495 130 VIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQ 208 (425)
T ss_pred EEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhccCCCceEEEEECCcc
Confidence 999999999875433221 10 12233322110 0222 44456666431111267888884 55
Q ss_pred CCCCC-CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCC
Q psy13922 168 GNPTG-QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGL 246 (509)
Q Consensus 168 ~NPtG-~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Gl 246 (509)
+| +| ..+|++.+++|.++|++||+++|+||+|.+|..++. ....... ++.+ -+.++||.+ | +|+
T Consensus 209 g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~--~~a~~~~--gv~p--------Di~tlsK~l-~-~G~ 273 (425)
T PRK07495 209 GE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK--LFAMEHH--EVAA--------DLTTMAKGL-A-GGF 273 (425)
T ss_pred CC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCC--ceeeccc--CCCC--------CEEeehhhh-c-CCc
Confidence 66 78 468999999999999999999999999998866542 2122111 1111 156889999 5 899
Q ss_pred eeEEEeeecCCHHHHHHHHHhhh-cccCcchh
Q psy13922 247 RGGYSEVINLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 247 r~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
|+|+++ .++++++.+..... .+++.+.+
T Consensus 274 pigav~---~~~~i~~~~~~~~~~~T~~~~pl 302 (425)
T PRK07495 274 PLAAVT---GRAEIMDAPGPGGLGGTYGGNPL 302 (425)
T ss_pred cceEEE---EcHHHHhccCCCCcCCCCCCCHH
Confidence 999998 78888887754322 33445555
No 234
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.80 E-value=8.4e-18 Score=176.25 Aligned_cols=206 Identities=11% Similarity=-0.015 Sum_probs=138.0
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.+.+++.+++.+ .. ..|.+..+..+|.+.+++.+ . ..+.+++++++++|+..+++..+.... ++.
T Consensus 68 ~p~i~~a~~~~~~~---~~-~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGseA~e~Aik~a~~~~g--~~~ 134 (426)
T PRK00062 68 HPEVVEAVIEAAEK---GL-SFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTEATMSAIRLARGYTG--RDK 134 (426)
T ss_pred CHHHHHHHHHHHHh---CC-cCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHHHHHHHHHHHHHHhC--CCe
Confidence 68999999999987 22 22455555566777776654 1 246899999999999999998765422 348
Q ss_pred EEEcCCCChhHHHHHHhc-CC------------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 107 VLIPIPQYPLYSASLAEF-NM------------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
|+...++|+++...+... |. ....++.....--..|++.+++.+.+.. .++++|++......+|.
T Consensus 135 ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~--~~~aaiivEpv~~~~G~ 212 (426)
T PRK00062 135 IIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYG--DEIAAVIVEPVAGNMGV 212 (426)
T ss_pred EEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCC--CcEEEEEEeCCcCCCCC
Confidence 999999999986443221 10 0000000000000137899998886421 26778888644444787
Q ss_pred CCC-HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 174 VLT-KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 174 ~~s-~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
+.+ ++++++|.++|++||+++|+||+|..+.. +. .... +. .+..++ +.++||.+ | .|+++|+++
T Consensus 213 ~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~-g~--~~~~-~~-~~~~pD--------i~~~gK~l-~-~G~p~ga~~ 277 (426)
T PRK00062 213 VPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV-AL--GGAQ-GY-YGVTPD--------LTTLGKII-G-GGLPVGAFG 277 (426)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeechhcccc-CC--ccHH-HH-hCCCcc--------hHhhhhHh-h-CCCcceeee
Confidence 665 88999999999999999999999998833 22 1111 11 111111 34889999 5 899999997
Q ss_pred eecCCHHHHHHHH
Q psy13922 253 VINLDPGVKAMLH 265 (509)
Q Consensus 253 ~~~~~~~~~~~l~ 265 (509)
.++++++.+.
T Consensus 278 ---~~~~i~~~~~ 287 (426)
T PRK00062 278 ---GRREIMEQLA 287 (426)
T ss_pred ---EHHHHHHhhc
Confidence 7889999885
No 235
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=3.4e-17 Score=168.38 Aligned_cols=166 Identities=14% Similarity=0.148 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----HHhcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----LAEFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~~~~g~~~~~v 131 (509)
..|++.+|+++. .+++++++|+++|+..++.++.++|| +|+++.|.|.+.... ++..|+++..+
T Consensus 53 ~~lE~~lA~l~g--------~~~~~~~~sG~~Ai~~al~all~~GD----~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~ 120 (377)
T TIGR01324 53 FALQDAMCELEG--------GAGCYLYPSGLAAVTNSILAFVKAGD----HVLMVDSAYEPTRYFCDIVLKRMGVDITYY 120 (377)
T ss_pred HHHHHHHHHHhC--------CCcEEEECcHHHHHHHHHHHhcCCCC----EEEEcCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence 589999998873 46899999999999999999999998 999999999877643 35678887776
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
+.. +.+.+++.+++ ++++|++++|+||+|.. .++++|+++|+++|+++|+|++|......
T Consensus 121 d~~-------~~e~l~~~i~~-----~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~----- 180 (377)
T TIGR01324 121 DPL-------IGEDIATLIQP-----NTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLF----- 180 (377)
T ss_pred CCC-------CHHHHHHhcCC-----CceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc-----
Confidence 422 23778888776 79999999999999887 45999999999999999999999864321
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHh
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~ 267 (509)
.++ +.+ . -++++|++|.++|.+++.+|+++ .+++.++.+...
T Consensus 181 ~pl-----~~g-----a-Divv~S~tK~l~G~~d~~gG~v~---~~~~~~~~l~~~ 222 (377)
T TIGR01324 181 KPL-----EHG-----V-DISIQAGTKYLVGHSDIMIGTVV---ANARTWDQLREH 222 (377)
T ss_pred Ccc-----ccC-----c-eEEEecCceeccCCCCceEEEEE---eCHHHHHHHHHH
Confidence 111 111 1 36688999999777778889887 677777777643
No 236
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.80 E-value=9.4e-17 Score=165.53 Aligned_cols=176 Identities=16% Similarity=0.157 Sum_probs=113.4
Q ss_pred cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEe
Q psy13922 53 PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYY 132 (509)
Q Consensus 53 ~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 132 (509)
.-..++++.+|++++ . ++.+++++|.+ ++..++..+.++++ .|++..-.|......++......+.++
T Consensus 56 ~~~~~~e~~la~~~~----~---~~~l~~~sG~~-a~~~~~~~~~~~~d----~ii~d~~~H~sv~~~~~~~~~~~~~~~ 123 (370)
T PRK05937 56 SLLDDLEHKIAHFHG----A---PEAFIVPSGYM-ANLGLCAHLSSVTD----YVLWDEQVHISVVYSLSVISGWHQSFR 123 (370)
T ss_pred HHHHHHHHHHHHHhC----C---CeEEEECChHH-HHHHHHHHhCCCCC----EEEEEhhhhHHHHHHHHHcCCceEEec
Confidence 345678888888773 1 23466677664 55555656656665 777767777777777666543333342
Q ss_pred cCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 133 LDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 133 ~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
..|++.|++.++...+. +++.+|++++++|++|.+.| +++|.++|+++|+++++|++|+...++.. .
T Consensus 124 -------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~--g 191 (370)
T PRK05937 124 -------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDD--G 191 (370)
T ss_pred -------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC--C
Confidence 35899999999753221 24556778999999999998 88999999999999999999987444321 1
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
..+. ...+.. +. .+.+.|+||.+ |..|. | ++ ..+++.+.+.
T Consensus 192 ~g~~---~~~~~~--~~-~~~~~tlsK~~-g~~G~--~-vl---~~~~~~~~~~ 232 (370)
T PRK05937 192 KGFC---HSLGYE--NF-YAVLVTYSKAL-GSMGA--A-LL---SSSEVKQDLM 232 (370)
T ss_pred CchH---HhhCCC--CC-cEEEEechhhh-hcCce--E-EE---cCHHHHHHHH
Confidence 1111 111100 11 24577999999 76663 3 33 4566666554
No 237
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.80 E-value=2.9e-17 Score=171.56 Aligned_cols=163 Identities=19% Similarity=0.174 Sum_probs=129.3
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH----HHH
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS----ASL 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~----~~~ 121 (509)
+++|+.+. ..+|++.++++++ .+..++++++++|+..++.+++++|| +|+++.+.|.+.. ..+
T Consensus 51 ysr~~~p~-~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~Gd----~Vl~~~~~y~~t~~~~~~~~ 117 (418)
T TIGR01326 51 YSRLMNPT-TDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAGD----NIVSSSYLYGGTYNLFKHTL 117 (418)
T ss_pred eECCCChh-HHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCC----EEEEECCCcHHHHHHHHHHH
Confidence 45555443 4788899998873 25688899999999999999999998 9999999987643 445
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
+..|++++.++.+ |++.+++.+++ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|.
T Consensus 118 ~~~G~~v~~v~~~-------d~~~l~~~l~~-----~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~ 182 (418)
T TIGR01326 118 KRLGIEVRFVDPD-------DPEEFEKAIDE-----NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFA 182 (418)
T ss_pred HHcCcEEEEECCC-------CHHHHHHhcCc-----CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCc
Confidence 6789999988742 78999998876 7999999999999999987 8899999999999999999997
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
.... ..++ . ....++++|+||.+ |.+|+|+||+++
T Consensus 183 ~~~~-----~~~l-~----------~g~Divv~S~sK~l-~g~G~~lGg~v~ 217 (418)
T TIGR01326 183 TPYL-----CRPI-D----------HGADIVVHSATKYI-GGHGTAIGGVIV 217 (418)
T ss_pred hhhc-----CCch-h----------cCCeEEEECccccc-cCCccceEEEEE
Confidence 4311 1111 1 11257788999999 578999999983
No 238
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=1.1e-16 Score=167.17 Aligned_cols=155 Identities=18% Similarity=0.206 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH----HHHHhcCCEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS----ASLAEFNMEQIG 130 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~----~~~~~~g~~~~~ 130 (509)
...|.+.++++.+ .+..++++|+++|+..++..++++|| +|+++.+.|.+.. ..++..|++++.
T Consensus 66 ~~~Le~~lA~leg--------~~~al~~~sG~~Ai~~al~~ll~~GD----~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~ 133 (431)
T PRK08248 66 TDVFEKRIAALEG--------GIGALAVSSGQAAITYSILNIASAGD----EIVSSSSLYGGTYNLFAHTLPKLGITVKF 133 (431)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEccCchhhHHHHHHHHHHhCCEEEEE
Confidence 3678888888872 45788999999999999999999998 9999999887643 445678999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCc
Q psy13922 131 YYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSK 210 (509)
Q Consensus 131 v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~ 210 (509)
++.. |++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.... .
T Consensus 134 vd~~-------d~e~l~~ai~~-----~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~-----~ 193 (431)
T PRK08248 134 VDPS-------DPENFEAAITD-----KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPY-----L 193 (431)
T ss_pred ECCC-------CHHHHHHhcCC-----CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCccc-----c
Confidence 8752 78999998876 7999999999999999988 7899999999999999999986311 1
Q ss_pred cccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 211 FYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
..++ +.+ . .++++|++|.+ |.+|.++|++++
T Consensus 194 ~~pl-----~~g-----a-Divv~S~tK~l-gg~g~~~Gg~v~ 224 (431)
T PRK08248 194 LRPI-----EHG-----A-DIVVHSATKFI-GGHGTSIGGVIV 224 (431)
T ss_pred CChh-----HcC-----C-CEEEEcCcccc-CCCCCceEEEEE
Confidence 1221 111 1 35577999999 679999999874
No 239
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.79 E-value=3e-17 Score=171.18 Aligned_cols=337 Identities=13% Similarity=0.104 Sum_probs=199.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCC-CCCcEEE-eCCHHHHHHHHHHHhhcCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPA-DWQDVIL-SAGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~-~~~~i~~-t~G~~~al~~~~~~l~~~gd~~~ 104 (509)
+|.|.+++.+++.+.. ... .. ....+.+..+++.|.+....+. ..+.+++ +++++||++.+++..+.-.. |
T Consensus 53 ~p~v~~ai~~ql~~~~--~~~--~~-~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tg--r 125 (412)
T TIGR02407 53 NPKLKQALIDYLADDG--IIH--SL-DMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTG--R 125 (412)
T ss_pred CHHHHHHHHHHHhhcc--cee--cc-ccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcC--C
Confidence 7899999999998621 111 11 1113344555555543211010 1124656 48899999999998875432 4
Q ss_pred CeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCCCCCC-CCCHHHHHHHHHhhhcc-CCceEEEEeCCCC
Q psy13922 105 PGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDESKQW-GLPISELERSITEARKH-CNPRAIVIINPGN 169 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~~-~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~N 169 (509)
++|+....+|++....+... |. .+..+|....... .-+++.+++.+.+.... .++.+|++...++
T Consensus 126 ~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g 205 (412)
T TIGR02407 126 SNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQG 205 (412)
T ss_pred CeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccC
Confidence 58999999999876544322 11 1222222110000 01366788888643211 2578888877788
Q ss_pred CCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC-CCe
Q psy13922 170 PTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC-GLR 247 (509)
Q Consensus 170 PtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~-Glr 247 (509)
+.|. .+|++.+++|.++|++||+++|+||++.+|...+. ..+... .++.++ +.++||.+ | + |+|
T Consensus 206 ~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~--~~a~~~--~~v~PD--------i~~~~K~l-g-~~G~p 271 (412)
T TIGR02407 206 EGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGT--FFSFEP--AGIEPD--------IVCLSKSI-S-GYGLP 271 (412)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--hHHhcc--cCCCCC--------EEEechhc-c-CCccc
Confidence 8898 78999999999999999999999999998765431 111111 122222 33678999 5 6 999
Q ss_pred eEEEeeecCCHHHHHHHHHhh-hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCC
Q psy13922 248 GGYSEVINLDPGVKAMLHKSI-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPG 326 (509)
Q Consensus 248 ~G~v~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 326 (509)
+|+++ .++++ +.+.... ..+++.+.+++++ +++++..++.
T Consensus 272 igav~---~~~~~-~~~~~~~~~~T~~gnpl~~aa------------------------------a~a~l~~~i~----- 312 (412)
T TIGR02407 272 LALTL---IKPEL-DVWKPGEHNGTFRGNNLAFVT------------------------------ATAALEYYWS----- 312 (412)
T ss_pred eeEEE---Echhh-hccCCCccCCCCCccHHHHHH------------------------------HHHHHHHHhc-----
Confidence 99998 56665 4443211 1233444443333 4555554332
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 327 EPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
+ .+..++.+++.+.++++.+.+.+.+ |++.......|.++|+.+..+. .... +...+.++|
T Consensus 313 ~---~~l~~~~~~~g~~l~~~l~~l~~~~---~~~~~~vrg~Gl~~~l~l~~~~------------~~~~-~~~~~~~~G 373 (412)
T TIGR02407 313 D---DAFEKAVQRKSEIIQERLDRIVAEY---PELIKQVRGRGLMQGIECGDGD------------LAGK-IAKAAFENG 373 (412)
T ss_pred c---cHHHHHHHHHHHHHHHHHHHHHhhC---CCceEeeecceeEEEEEecChH------------HHHH-HHHHHHHCC
Confidence 1 2233445555566655555444443 2222334456888897775211 1122 345566789
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-- 484 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-- 484 (509)
|.+.+...+. . .+|++..
T Consensus 374 v~v~~~~~~~----------------------------------------------------~--------~lr~~p~l~ 393 (412)
T TIGR02407 374 LIIETSGPND----------------------------------------------------E--------VIKLLPPLT 393 (412)
T ss_pred CEEeccCCCC----------------------------------------------------C--------EEEEECCCC
Confidence 9997632111 1 5776655
Q ss_pred cChHHHHHHHHHHHHHHH
Q psy13922 485 PQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~ 502 (509)
.+++++++++++|.++++
T Consensus 394 ~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 394 IDEETLQQGLDILEQAVE 411 (412)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 899999999999999885
No 240
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.79 E-value=2.6e-17 Score=171.54 Aligned_cols=205 Identities=10% Similarity=0.062 Sum_probs=134.4
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC------
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV------ 100 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g------ 100 (509)
+|.|.+++.+.+........ .+ ...-..++.+.+++++ + .+.+++++++++|+..+++.++..+
T Consensus 55 ~p~v~~a~~~~~~~~~~~~~-~~-~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~ 124 (401)
T TIGR01885 55 HPKIVKALTEQAQKLTLSSR-AF-YNDVFGEFAEYVTKLF----G----YDKVLPMNTGAEAVETAIKLARKWGYKVKGI 124 (401)
T ss_pred CHHHHHHHHHHHHhcccccc-cc-CCHHHHHHHHHHHhhc----C----CCEEEEeCccHHHHHHHHHHHHHHhhhhcCC
Confidence 78999999999887321111 11 1222244555555443 3 3689999999999999999874321
Q ss_pred CCCCCeEEEcCCCChhH-HHHHHhcCC------------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCC
Q psy13922 101 DGKKPGVLIPIPQYPLY-SASLAEFNM------------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINP 167 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~-~~~~~~~g~------------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p 167 (509)
.+.++.|+...-+|++. ...+...+. .+..++ ..|++.|++.+++.. .++.+|++..+
T Consensus 125 ~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~l~~~~--~~~~avi~E~v 195 (401)
T TIGR01885 125 PENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP-------YNNLEALEEALEDHG--PNVCAFIVEPI 195 (401)
T ss_pred CCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC-------CCCHHHHHHHHHhcC--CCEEEEEEeCc
Confidence 01134788888888864 333332221 122222 127899999887531 26778888889
Q ss_pred CCCCCCCCC-HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCC
Q psy13922 168 GNPTGQVLT-KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGL 246 (509)
Q Consensus 168 ~NPtG~~~s-~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Gl 246 (509)
++++|...+ .+++++|.++|++||+++|+||+|..+.+++ .+.+. +. .+.. .+++ ++||.+ |..|+
T Consensus 196 ~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G--~~~~~-~~-~~~~-----~di~---~~gK~l-~~g~~ 262 (401)
T TIGR01885 196 QGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG--KLLCV-DH-ENVK-----PDIV---LLGKAL-SGGVY 262 (401)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc--hhhHH-hh-cCCC-----CCEE---Eeeccc-cCCCC
Confidence 999999775 5579999999999999999999998876544 22121 11 1111 1244 467999 55568
Q ss_pred eeEEEeeecCCHHHHHHHHH
Q psy13922 247 RGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 247 r~G~v~~~~~~~~~~~~l~~ 266 (509)
|+|+++ .++++++.+..
T Consensus 263 ~ig~v~---~~~~i~~~~~~ 279 (401)
T TIGR01885 263 PVSAVL---ADDDVMLTIKP 279 (401)
T ss_pred CcEEEE---EcHHHHhhccC
Confidence 999998 78888887764
No 241
>PLN02509 cystathionine beta-lyase
Probab=99.79 E-value=1.3e-16 Score=167.08 Aligned_cols=223 Identities=14% Similarity=0.141 Sum_probs=153.3
Q ss_pred cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----HHh
Q psy13922 48 SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----LAE 123 (509)
Q Consensus 48 ~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~~~ 123 (509)
.|+.. |.+ .++++++.+.+..| .+++++++|+++++..++ .+.++|| +|+++.|.|.++... +..
T Consensus 126 ~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il-~ll~~GD----~VI~~~~~y~~t~~ll~~~l~~ 194 (464)
T PLN02509 126 DYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVT-HLIKNGE----EIVAGDDVYGGSDRLLSQVVPR 194 (464)
T ss_pred ccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHH-HHhCCCC----EEEEcCCchhhHHHHHHHHHHH
Confidence 37655 533 57777777766543 456777788889997666 5788998 999999999987633 456
Q ss_pred cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcc
Q psy13922 124 FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDN 203 (509)
Q Consensus 124 ~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~ 203 (509)
.|+++..++. .|++.+++.+.+ ++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|...
T Consensus 195 ~G~~v~~vd~-------~d~e~l~~ai~~-----~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~ 259 (464)
T PLN02509 195 SGVVVKRVNT-------TNLDEVAAAIGP-----QTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSP 259 (464)
T ss_pred CCeEEEEeCC-------CCHHHHHHhCCc-----CCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCcccc
Confidence 7999888753 268889888876 79999999999999997 56999999999999999999998653
Q ss_pred cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhccc-Ccchhhhhcc
Q psy13922 204 VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAML-CPTVLALVSL 282 (509)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~ 282 (509)
... .++ +.+ . .++++|++|.+.|..++-.|++++ .++.+...++..+.... ..+...
T Consensus 260 ~~~-----~pl-----~~g-----a-Divv~S~tK~l~G~gdv~gG~v~~--~~~~l~~~~~~~~~~~g~~l~p~~---- 317 (464)
T PLN02509 260 VLS-----RPL-----ELG-----A-DIVMHSATKFIAGHSDVMAGVLAV--KGEKLAKEVYFLQNSEGSGLAPFD---- 317 (464)
T ss_pred ccC-----Chh-----hcC-----C-cEEEecCcccccCCCccceeEEEe--ccHHHHHHHHHHHHhcCCCcCHHH----
Confidence 321 111 111 1 355779999995434444676653 46666666554433211 111110
Q ss_pred ccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCe
Q psy13922 283 PQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMS 362 (509)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 362 (509)
+..+ .+..+.+....++..+++..+.+.|++.|.++
T Consensus 318 -----------------------------A~l~---------------lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 318 -----------------------------CWLC---------------LRGIKTMALRIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred -----------------------------HHHH---------------HhhhhhHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 1111 11222366777888888899999999887764
No 242
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=9.9e-17 Score=167.43 Aligned_cols=155 Identities=23% Similarity=0.226 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh----cCCEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE----FNMEQIG 130 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~----~g~~~~~ 130 (509)
...|++.++++.+ .+..++++++++|+..++.++.++|| +|+++.+.|.+....+.. .|.++..
T Consensus 60 ~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~Gd----~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~ 127 (425)
T PRK06084 60 NDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAGD----NIVSVAKLYGGTYNLLAHTLPRIGIETRF 127 (425)
T ss_pred HHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCCC----EEEEeCCCcchHHHHHHHhcccceeEEEE
Confidence 3678888888873 24567788888999999999999998 999999999865554432 4666665
Q ss_pred EecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCc
Q psy13922 131 YYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSK 210 (509)
Q Consensus 131 v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~ 210 (509)
++. .|++.+++++++ ++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|.....
T Consensus 128 ~d~-------~d~e~le~ai~~-----~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----- 187 (425)
T PRK06084 128 AAH-------DDIAALEALIDE-----RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----- 187 (425)
T ss_pred ECC-------CCHHHHHHHhcc-----CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 542 389999999987 7999999999999999988 89999999999999999999975321
Q ss_pred cccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 211 FYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
..++ . .+ . -++++|+||.+ |.+|.++|.+++
T Consensus 188 ~~p~-~----~g-----a-Divv~S~tK~l-~G~g~~~gG~v~ 218 (425)
T PRK06084 188 CRPF-E----HG-----A-DIVVHSLTKYI-GGHGTSIGGIVV 218 (425)
T ss_pred CChh-h----cC-----C-CEEEECchhcc-cccccceeEEEE
Confidence 1111 1 11 1 36678999999 458888888773
No 243
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.79 E-value=8.9e-17 Score=168.38 Aligned_cols=211 Identities=14% Similarity=0.162 Sum_probs=129.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEE-eCCHHHHHHHHHHHhhcCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVIL-SAGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~-t~G~~~al~~~~~~l~~~gd~~~ 104 (509)
+|.|.+++.+++..........+. .+.+..+++.+.+....+-..+ .+++ +++++||++.+++..+.-.. +
T Consensus 57 ~p~v~~ai~~ql~~~~~~~~~~~~-----~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tg--r 129 (425)
T PRK09264 57 NPVLKQALIDYLQRDGITHGLDMH-----TTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTG--R 129 (425)
T ss_pred CHHHHHHHHHHHHhcccccccccC-----cHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcC--C
Confidence 689999999988862211111111 2344445554443211111112 4656 47999999999998865432 4
Q ss_pred CeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCCCCCCC-CCHHHHHHHHHhhhcc-CCceEEEEeCCCC
Q psy13922 105 PGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDESKQWG-LPISELERSITEARKH-CNPRAIVIINPGN 169 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~~~-~d~~~L~~~i~~~~~~-~~~~~ivi~~p~N 169 (509)
.+|+....+|++........ |- .+..+|........ -|++.+++.+...... .++.+|++.....
T Consensus 130 ~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g 209 (425)
T PRK09264 130 TNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQG 209 (425)
T ss_pred CeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccC
Confidence 57999999999876543322 10 12333322110000 2677888888653211 2567888865666
Q ss_pred CCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 170 PTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 170 PtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
..|. ..+++++++|.++|++||+++|+||++.+|...| ....... .++.+ ++ .++||.+ |..|+++
T Consensus 210 ~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG--~~~~~~~--~~v~P-----Di---~t~~K~l-~~~G~pi 276 (425)
T PRK09264 210 EGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG--TFFSFER--AGITP-----DI---VTLSKSI-SGYGLPM 276 (425)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc--HHHHHhh--cCCCC-----CE---EEecccc-CCCccce
Confidence 6776 6789999999999999999999999999876554 1212111 11222 23 3679999 5349999
Q ss_pred EEEeeecCCHHH
Q psy13922 249 GYSEVINLDPGV 260 (509)
Q Consensus 249 G~v~~~~~~~~~ 260 (509)
|+++ .++++
T Consensus 277 gav~---~~~~i 285 (425)
T PRK09264 277 ALVL---IKPEL 285 (425)
T ss_pred EEEE---Echhh
Confidence 9998 56665
No 244
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=4.5e-17 Score=171.47 Aligned_cols=230 Identities=12% Similarity=0.048 Sum_probs=136.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+. .+ +.......+.+..+++.+.+..+.. ..+.+++++++++|++.+++..+.-.. ++.
T Consensus 74 ~p~v~~ai~~q~~~~---~~--~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~tg--r~~ 145 (443)
T PRK06058 74 APRVVEAVREQVARF---TH--TCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSALFNSGAEAVENAVKIARSYTG--RQA 145 (443)
T ss_pred CHHHHHHHHHHHHhc---cC--ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEEeCCcHHHHHHHHHHHHHhhC--CCe
Confidence 689999999999872 21 1111122456666676665543211 124789999899999999996654321 348
Q ss_pred EEEcCCCChhHHHHHHhcCC--------------EEEEEecCCCCC----CCCCH-HHHHHHH---HhhhccCCceEEEE
Q psy13922 107 VLIPIPQYPLYSASLAEFNM--------------EQIGYYLDESKQ----WGLPI-SELERSI---TEARKHCNPRAIVI 164 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~--------------~~~~v~~~~~~~----~~~d~-~~L~~~i---~~~~~~~~~~~ivi 164 (509)
|+....+|+++...+..... .+..+|.....+ +..+. +.+++.+ ++.....++.+|++
T Consensus 146 ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~ 225 (443)
T PRK06058 146 VVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVII 225 (443)
T ss_pred EEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEE
Confidence 99999999998755443211 112222110000 00110 1121211 11101125777776
Q ss_pred eCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCC
Q psy13922 165 INPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGE 243 (509)
Q Consensus 165 ~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~ 243 (509)
...+.-.|. ..+++.+++|.++|++||+++|.||++.+|...+. ...... .++.++ ++ +++|.+ |
T Consensus 226 EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~--~fa~~~--~gv~PD-----iv---~~gK~l-~- 291 (443)
T PRK06058 226 EPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGA--WFACEH--EGIVPD-----LI---TTAKGI-A- 291 (443)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChh--hhHHHh--cCCCCC-----EE---EEcccc-c-
Confidence 433333455 45689999999999999999999999999876542 222111 122222 44 558999 5
Q ss_pred CCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhc
Q psy13922 244 CGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVS 281 (509)
Q Consensus 244 ~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 281 (509)
+|+++|+++ .++++++.+..... .+.+.+.+++++
T Consensus 292 ~G~Pi~av~---~~~~i~~~~~~~~~~~T~~gnpl~~aa 327 (443)
T PRK06058 292 GGLPLSAVT---GRAEIMDAPHPGGLGGTYGGNPVACAA 327 (443)
T ss_pred CCCccEEEE---EcHHHHhhccCCCCCCCCCCCHHHHHH
Confidence 899999998 78899888764432 344566663333
No 245
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.78 E-value=1.1e-17 Score=166.89 Aligned_cols=170 Identities=18% Similarity=0.126 Sum_probs=130.9
Q ss_pred CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEE
Q psy13922 51 DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIG 130 (509)
Q Consensus 51 ~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~ 130 (509)
|..-..++++.+|++++ ..+.+++|+|+++++..++.+++++|| .|+++.|+|.+....+...|++++.
T Consensus 57 ~~g~i~~~~~~~A~~~g-------a~~~~~~~~Gst~a~~~~l~al~~~gd----~Vlv~~~~h~s~~~~~~~~g~~~~~ 125 (294)
T cd00615 57 PTGPIKEAQELAARAFG-------AKHTFFLVNGTSSSNKAVILAVCGPGD----KILIDRNCHKSVINGLVLSGAVPVY 125 (294)
T ss_pred CChHHHHHHHHHHHHhC-------CCCEEEEcCcHHHHHHHHHHHcCCCCC----EEEEeCCchHHHHHHHHHCCCEEEE
Confidence 34446788899998883 123455699999999999999999998 9999999999999999999999999
Q ss_pred EecCCCCC----CCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcc-cc
Q psy13922 131 YYLDESKQ----WGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDN-VY 205 (509)
Q Consensus 131 v~~~~~~~----~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~-~~ 205 (509)
++.+.+.. ..+|++.+++.+++. ++++++++++| |++|.+++ +++|+++|+++|+++|+|++|... .+
T Consensus 126 v~~~~~~~~~~~~~i~~~~l~~~l~~~---~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~ 198 (294)
T cd00615 126 LKPERNPYYGIAGGIPPETFKKALIEH---PDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRF 198 (294)
T ss_pred ecCccCcccCcCCCCCHHHHHHHHHhC---CCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhcc
Confidence 87754433 368999999999752 26899999998 79999987 899999999999999999999753 33
Q ss_pred cCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 206 AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
.+.. ..+... ....+++.|++|++ +|++.|+++
T Consensus 199 ~~~~-~~~~~~----------~~~div~~S~hK~l---~g~~~~~~l 231 (294)
T cd00615 199 HPIL-PSSAAM----------AGADIVVQSTHKTL---PALTQGSMI 231 (294)
T ss_pred Cccc-Ccchhh----------cCCcEEEEchhccc---chHhHHHHH
Confidence 3211 111111 11256678999986 677766654
No 246
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.78 E-value=2.8e-16 Score=161.97 Aligned_cols=177 Identities=15% Similarity=0.144 Sum_probs=126.1
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH----HHH
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS----ASL 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~----~~~ 121 (509)
+.+|+.+. ...|++.++++.+ .+..+++++++.|+..++ .++++|| +|+++.|.|.+.. ..+
T Consensus 44 y~r~~~p~-~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l-~~l~pGd----~Vi~~~~~y~~t~~~~~~~~ 109 (380)
T PRK06176 44 YSRSGNPT-RFALEELIADLEG--------GVKGFAFASGLAGIHAVF-SLFQSGD----HVLLGDDVYGGTFRLFDKVL 109 (380)
T ss_pred ccCCCChh-HHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHH-HHcCCCC----EEEEcCCChhHHHHHHHHHH
Confidence 44444333 4678888888873 223445555567898766 5678888 9999999987654 345
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
...|+++..++. .|++.+++++++ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|.
T Consensus 110 ~~~gi~v~~vd~-------~d~e~l~~ai~~-----~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a 174 (380)
T PRK06176 110 VKNGLSCTIIDT-------SDLSQIKKAIKP-----NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFA 174 (380)
T ss_pred HhcCeEEEEcCC-------CCHHHHHHhcCc-----CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCcc
Confidence 667888887753 278999998876 7999999999999999987 8899999999999999999998
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
..... .++ . .+ . -++++|++|.++|..+.-.|+++ +.++++.+++...+.
T Consensus 175 ~~~~~-----~p~-~----~g-----a-Divv~S~tK~l~g~~d~~gG~vv--~~~~~~~~~~~~~~~ 224 (380)
T PRK06176 175 TPYYQ-----NPL-L----LG-----A-DIVVHSGTKYLGGHSDVVAGLVT--TNNEALAQEIAFFQN 224 (380)
T ss_pred ccccC-----Ccc-c----cC-----C-CEEEecCceeccCCccceeeEEE--ecHHHHHHHHHHHHH
Confidence 64322 111 1 11 1 35577999999543334566665 256778777766554
No 247
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.78 E-value=5.2e-17 Score=163.60 Aligned_cols=339 Identities=16% Similarity=0.153 Sum_probs=217.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++++++++ + .+ |+.+ .++.-.+|+.+.++.+ ..+.|-+++++|||...+++..+.-.. |+.
T Consensus 71 ~p~V~~Av~~~l~~---G-~~-fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEAtmsAiRlARa~Tg--R~k 137 (432)
T COG0001 71 HPAVVEAVQEQLER---G-LS-FGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEATMSAIRLARAYTG--RDK 137 (432)
T ss_pred CHHHHHHHHHHHHh---c-CC-CCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHHHHHHHHHHHHhhC--CCe
Confidence 67899999999999 3 22 5443 2355556666655533 448999999999999999998876543 669
Q ss_pred EEEcCCCChhHHHHHHh-cC--CEEEEEecCCC-------CCC---CCCHHHHHHHHHhhhccCCceEEEE-eCCCCCCC
Q psy13922 107 VLIPIPQYPLYSASLAE-FN--MEQIGYYLDES-------KQW---GLPISELERSITEARKHCNPRAIVI-INPGNPTG 172 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~-~g--~~~~~v~~~~~-------~~~---~~d~~~L~~~i~~~~~~~~~~~ivi-~~p~NPtG 172 (509)
|+...-||+++.+.+.. .| ......|..+. ... --|++.+++++++..+ ++.+|++ +.+.|..=
T Consensus 138 IikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~--~IAaVIvEPv~gn~g~ 215 (432)
T COG0001 138 IIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGD--DIAAVIVEPVAGNMGV 215 (432)
T ss_pred EEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCC--cEEEEEeccccCCCCC
Confidence 99999999997765543 22 11001010000 000 1289999999988533 6888888 46677644
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
+...++.++.|.++|+++|+++|.||+...|...-+ .......+.|| +.++.|.. | .|+++|.+.
T Consensus 216 i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~g-Gaq~~~gi~PD------------lttlGKiI-G-GGlP~ga~g 280 (432)
T COG0001 216 VPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALG-GAQGYYGVEPD------------LTTLGKII-G-GGLPIGAFG 280 (432)
T ss_pred CCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCc-ccccccCcCcc------------hhhhhhhh-c-CCcceeeec
Confidence 577788999999999999999999999998876421 12333334443 55889999 6 999999997
Q ss_pred eecCCHHHHHHHHHhhh----cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC
Q psy13922 253 VINLDPGVKAMLHKSIS----AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 328 (509)
+..++++.+..... ++.+.+.+++.| +.+.+..+..
T Consensus 281 ---Gr~eiM~~~~p~g~vyqaGT~sgnplamaA------------------------------G~atl~~l~~------- 320 (432)
T COG0001 281 ---GRAEIMEQLAPLGPVYQAGTLSGNPLAMAA------------------------------GLATLEELMT------- 320 (432)
T ss_pred ---cHHHHHhhhCCCCCccccCCCCCcHHHHHH------------------------------HHHHHHHHHh-------
Confidence 89999998865432 444555553333 4444444422
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeec-cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhh
Q psy13922 329 SYEQFSREKQSVLDSLKQRAKMVADTFNSI---EGMSCN-PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLER 404 (509)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~ 404 (509)
.+...+++.++.+.|.+.|+++ -++.+. ...++++-+.-.+.+..-.+.+.+.+......+.. .+.+
T Consensus 321 --------~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~-~~l~ 391 (432)
T COG0001 321 --------EEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFH-HLLN 391 (432)
T ss_pred --------cccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHH-HHHh
Confidence 0113445555555555555542 155553 34555555432332222233333333333344445 5556
Q ss_pred cCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee
Q psy13922 405 TGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL 484 (509)
Q Consensus 405 ~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~ 484 (509)
.||++.|+.+ . . +| +|.+
T Consensus 392 ~GV~l~ps~~----------------------------------------------------e-a--------~f-lS~a 409 (432)
T COG0001 392 RGVYLAPSQF----------------------------------------------------E-A--------GF-LSTA 409 (432)
T ss_pred CCcccCCccc----------------------------------------------------c-c--------ee-eecc
Confidence 7999987541 1 0 22 7888
Q ss_pred cChHHHHHHHHHHHHHHHHHHh
Q psy13922 485 PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
+++++|+..++.+.+++++...
T Consensus 410 hte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 410 HTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred cCHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999887653
No 248
>PRK05939 hypothetical protein; Provisional
Probab=99.78 E-value=2.1e-16 Score=163.60 Aligned_cols=154 Identities=16% Similarity=0.143 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEe
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYY 132 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~ 132 (509)
..|++.++++.+ .+..+++++++.|+..++.++.++|| +|+++.+.|..+. ..++..|++++.++
T Consensus 50 ~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all~~Gd----~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~ 117 (397)
T PRK05939 50 AALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLLRAGD----HLVSSQFLFGNTNSLFGTLRGLGVEVTMVD 117 (397)
T ss_pred HHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHcCCCC----EEEECCCccccHHHHHHHHHhcCCEEEEEC
Confidence 478888888873 23345555568999999999999998 9999999987643 35667899999887
Q ss_pred cCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccc
Q psy13922 133 LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFY 212 (509)
Q Consensus 133 ~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~ 212 (509)
.. |++.+++.+++ ++++|++++|+||||.+ .++++|+++|+++|+++|+|++|..... +.
T Consensus 118 ~~-------d~e~l~~~l~~-----~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~~-----~~ 177 (397)
T PRK05939 118 AT-------DVQNVAAAIRP-----NTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPWL-----FR 177 (397)
T ss_pred CC-------CHHHHHHhCCC-----CCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCcccccc-----cC
Confidence 42 78999999876 79999999999999998 4599999999999999999999864211 11
Q ss_pred cHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 213 SFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 213 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
+. +.+ ..++++|+||.++ ..|.++|++++
T Consensus 178 ~~-----~~g------aDivv~S~sK~~~-g~g~~igg~v~ 206 (397)
T PRK05939 178 PK-----DVG------ASLVINSLSKYIA-GHGNALGGAVT 206 (397)
T ss_pred cc-----ccC------CEEEEecCeeccc-CCCCeEEEEEe
Confidence 10 011 1567889999995 58999999873
No 249
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=3.9e-16 Score=160.53 Aligned_cols=171 Identities=16% Similarity=0.173 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH----HHHhcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA----SLAEFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~----~~~~~g~~~~~v 131 (509)
.+.++++++.+....+ . +..++++++++|+..++.+++++|| +|+++.|.|.++.. .++..|+++..+
T Consensus 63 nPt~~~Le~~la~le~---~-~~~v~~sSG~aAi~~~l~all~~GD----~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~v 134 (395)
T PRK05967 63 TPTTDALCKAIDALEG---S-AGTILVPSGLAAVTVPFLGFLSPGD----HALIVDSVYYPTRHFCDTMLKRLGVEVEYY 134 (395)
T ss_pred ChHHHHHHHHHHHHhC---C-CCEEEECcHHHHHHHHHHHhcCCCC----EEEEccCCcHHHHHHHHHHHHhcCeEEEEe
Confidence 4455555555543222 2 3345555578999999999999999 99999999999875 457789998887
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
+.. +.+.+++++++ ++++|++++|+||++.. .++++|+++|+++|+++|+|++|....+.
T Consensus 135 d~~-------~~e~l~~al~~-----~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~~----- 194 (395)
T PRK05967 135 DPE-------IGAGIAKLMRP-----NTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLYF----- 194 (395)
T ss_pred CCC-------CHHHHHHhcCc-----CceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCceec-----
Confidence 532 35778888877 79999999999997655 67999999999999999999999764321
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhh
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSI 268 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~ 268 (509)
.++. .+. -|+++|.+|.++|.+++-+|+++ .++++.+++....
T Consensus 195 ~pl~-----~Ga------Divv~S~tKy~~Gh~d~~~G~v~---~~~~~~~~l~~~~ 237 (395)
T PRK05967 195 RPLD-----FGV------DISIHAATKYPSGHSDILLGTVS---ANEKCWPQLLEAH 237 (395)
T ss_pred ChhH-----cCC------CEEEEecccccCCCCCeeEEEEE---cCHHHHHHHHHHH
Confidence 1211 111 36688999999888888899776 6777766665433
No 250
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.77 E-value=8.8e-16 Score=157.42 Aligned_cols=355 Identities=15% Similarity=0.123 Sum_probs=226.6
Q ss_pred HHHHHH-HhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc
Q psy13922 32 QRAQAV-LDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP 110 (509)
Q Consensus 32 ~a~~~~-l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~ 110 (509)
.+|... +.....+.-. |..+....+|.++++++++ .++++.|++++.|+++++...+++|| .| +
T Consensus 50 ~aMs~~q~a~~~~GDe~-yag~~s~~~lE~~va~~~G--------~~~av~v~sGT~Al~ll~~l~l~pGD----eV--p 114 (450)
T TIGR02618 50 NAMSDKQWAGLMMGDEA-YAGSRNFYHLERTVRELYG--------FKYVVPTHQGRGAENLLSQIAIKPGD----YV--P 114 (450)
T ss_pred HHHHHHHHHHhhhcchh-hcCCCcHHHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHhCCCCcC----EE--C
Confidence 455444 4443323333 8888888999999999993 45799999999999988877788887 76 6
Q ss_pred CCCChhHHHH-HHhcCCEEEEEecCC--------CCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC-CCCCCHHHH
Q psy13922 111 IPQYPLYSAS-LAEFNMEQIGYYLDE--------SKQWGLPISELERSITEARKHCNPRAIVIINPGNPT-GQVLTKENI 180 (509)
Q Consensus 111 ~p~y~~~~~~-~~~~g~~~~~v~~~~--------~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt-G~~~s~~~l 180 (509)
.++|...... +...|+.++.++.++ ..++.+|++.|++.|++... .++++|.+.+++|-. |.++|.+++
T Consensus 115 sn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-~~~~lV~~e~t~N~~GG~pvs~~~l 193 (450)
T TIGR02618 115 GNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-DKIPYICLAVTVNLAGGQPVSMANM 193 (450)
T ss_pred CceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-cccCceEEEEecccCCCeeCCHHHH
Confidence 6777555554 788898777775541 23467899999999986311 245677788888855 899999999
Q ss_pred HHHHHHHHHCCcEEEEcccCCc-ccc-----cCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 181 QDIIKFAHREKLFLFADEVYQD-NVY-----AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
+++.++|++||+.||+|.+... ..+ .++....++.++..++... .+.+ +.|..|.+ |.+- .|+++
T Consensus 194 ~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~---aD~~-~~S~~Kd~-~~~~--GG~l~-- 264 (450)
T TIGR02618 194 REVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSY---ADGC-TMSGKKDC-LVNI--GGFLC-- 264 (450)
T ss_pred HHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhcc---CcEE-EEeeccCC-CCCC--ceEEE--
Confidence 9999999999999999998755 111 2222345676666665543 2354 55889987 4431 35554
Q ss_pred cCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHH
Q psy13922 255 NLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFS 334 (509)
Q Consensus 255 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 334 (509)
+.++++.++++...-.+.+-.+.+..+.. ...++...+. +..
T Consensus 265 ~~d~~l~~k~r~~~~~~eG~~tyGgla~r----------------------------~~~ala~gL~----------e~~ 306 (450)
T TIGR02618 265 MNDDEMFQSAKELVVVFEGMPSYGGLAGR----------------------------DMEAMAIGIR----------EAV 306 (450)
T ss_pred eCCHHHHHHHHHHhhhcCCccccCchhhh----------------------------hHHHHHHHHH----------Hhh
Confidence 37999999998875433333333221210 2233333221 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCC--CCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecC
Q psy13922 335 REKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMK--LPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPG 412 (509)
Q Consensus 335 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg 412 (509)
+ +...+.-..+..+|.+.|.+. |+.+..|.++-.++++.. +|. +.. ..-+..-++.++..+.||-..--
T Consensus 307 ~--~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph-----~~~-~~~p~~al~~~ly~~~gir~~e~ 377 (450)
T TIGR02618 307 D--YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPH-----IPQ-DQFPAQSLAASIYVETGVRSMER 377 (450)
T ss_pred h--HHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCC-----CCh-hhChHHHHHHHHHHHhCccEEee
Confidence 1 122233334567888999888 999887888888887764 111 000 11244555778888889865542
Q ss_pred CCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee---cChHH
Q psy13922 413 AGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL---PQPEK 489 (509)
Q Consensus 413 ~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~---~~~~~ 489 (509)
..+... .. +..+....+.--.+||.+- -|.+.
T Consensus 378 g~~~~~---------------------------~~------------------~~~~~~~~~~~el~rlaiprr~yt~~h 412 (450)
T TIGR02618 378 GIVSAG---------------------------RN------------------NVTGEHHRPKLELVRLTIPRRVYTYAH 412 (450)
T ss_pred cceecc---------------------------cC------------------CCCCcccCCccceeeeccccccccHhH
Confidence 222110 00 1111111222237999988 58888
Q ss_pred HHHHHHHHHHHHHH
Q psy13922 490 LKAMLEKFREFHEE 503 (509)
Q Consensus 490 i~~~~~~l~~~~~~ 503 (509)
++-..++|..+.++
T Consensus 413 ~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 413 MDVVADGIIKLYKH 426 (450)
T ss_pred HHHHHHHHHHHHhh
Confidence 88888888888765
No 251
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.77 E-value=1.1e-18 Score=169.27 Aligned_cols=301 Identities=16% Similarity=0.223 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhcC--CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEe
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIED--VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYY 132 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~--gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 132 (509)
++|.+.|.++... .|-.+..+ .|++++|+|+.++.++.+|... ...+...|+...|.|..|........-....+.
T Consensus 46 ~eL~~~Ir~LH~~-VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 46 PELERQIRRLHRV-VGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp HHHHHHHHHHHHH-H-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred HHHHHHHHHHHHH-hccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 6777777776643 35444444 7999999999999999999765 333455799999999999988766655555555
Q ss_pred cCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccc
Q psy13922 133 LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFY 212 (509)
Q Consensus 133 ~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~ 212 (509)
-+.. .|. + .. ...+=+=++++||||.|.. .+.++ +..+..+|.|-+|..-.|++- +
T Consensus 125 Gda~-~~~-~---------~~--~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTpI---~ 180 (363)
T PF04864_consen 125 GDAS-NFK-N---------SD--NPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTPI---T 180 (363)
T ss_dssp EECC-CGT-T----------S---CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS------
T ss_pred ccHH-hhc-c---------CC--CCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeeccccccc---C
Confidence 4433 221 1 10 0012233468999999987 44444 456778899999988666532 1
Q ss_pred cHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCC
Q psy13922 213 SFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRF 291 (509)
Q Consensus 213 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 291 (509)
+. . +. -|.++|+||.- |.+|-|+||.++ .++++..+|..+.. .+.+++.=+++-...||+
T Consensus 181 ~~---a--------D~-DiMLFT~SK~T-GHAGSR~GWAlV--KD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk---- 241 (363)
T PF04864_consen 181 AP---A--------DH-DIMLFTLSKLT-GHAGSRFGWALV--KDEEVAKKMTKYMELNTIGVSRDSQLRALKILK---- 241 (363)
T ss_dssp S----B-----------SEEEEEHHHHC-S-GGG-EEEEEE--S-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHH----
T ss_pred CC---C--------CC-ceEEEEEeccc-Cccccccceeee--cCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH----
Confidence 11 0 11 34466999999 999999999998 99999999988766 566777654433222221
Q ss_pred chhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec-------
Q psy13922 292 PDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN------- 364 (509)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~------- 364 (509)
++++++... .+...+ .+--++.+++|...|.+.+..-..+.+.
T Consensus 242 ---------~v~~~~~~~---------------~~~~~~------F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC 291 (363)
T PF04864_consen 242 ---------VVLDGYGTE---------------KGTEDI------FHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYC 291 (363)
T ss_dssp ---------HHHHHCCHH---------------TTTTSH------HHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEE
T ss_pred ---------HHHhcccCC---------------CCccch------HHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhc
Confidence 111111100 000001 3334556677777777777653222221
Q ss_pred ------cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHH
Q psy13922 365 ------PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAI 438 (509)
Q Consensus 365 ------~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~ 438 (509)
...++.|+|++++.++ +++ +...|++.||..+.|..|+..
T Consensus 292 ~ff~~~~~psPafAWlkCe~ee-------------d~D-C~~~l~~~~I~tr~G~~fga~-------------------- 337 (363)
T PF04864_consen 292 NFFKRVREPSPAFAWLKCEREE-------------DED-CYAVLREAKIITRSGVLFGAD-------------------- 337 (363)
T ss_dssp TTTTCEEE---SEEEEEESSCG-------------GSS-HHHHHHCTTEEEEEGGGGTS---------------------
T ss_pred cccccccCCCCCeEEEecCCcc-------------ccc-HHHHHHhCCcccCCCCccCCC--------------------
Confidence 2346789999997432 122 789999999999999999882
Q ss_pred HHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHH
Q psy13922 439 AKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFH 501 (509)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~ 501 (509)
.. |+|||+-.++++++..++||..++
T Consensus 338 -----------------------------~r--------yVRlSml~~~d~Fd~l~~rL~~lv 363 (363)
T PF04864_consen 338 -----------------------------SR--------YVRLSMLKRDDDFDQLLERLSKLV 363 (363)
T ss_dssp -----------------------------TT--------EEEEESSS-HHHHHHHHHHHHCCH
T ss_pred -----------------------------CC--------eEEEeccCCHHHHHHHHHHHHhhC
Confidence 22 999999999999999999998653
No 252
>KOG1368|consensus
Probab=99.77 E-value=2.1e-16 Score=149.11 Aligned_cols=293 Identities=17% Similarity=0.160 Sum_probs=191.3
Q ss_pred HHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEE
Q psy13922 29 DVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108 (509)
Q Consensus 29 ~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vl 108 (509)
+.++++.++... ..- |+...-...|.+.+|+.++ ....+++++|++..+-.+...+.++|. .||
T Consensus 37 eMr~am~eA~vg----DdV-yGeD~tt~rLE~~vA~l~G-------KEAgLFv~SGTmgNllaIm~Hc~~rg~----eii 100 (384)
T KOG1368|consen 37 EMRRAMAEASVG----DDV-YGEDPTTNRLEQRVAELFG-------KEAGLFVPSGTMGNLLAIMVHCHQRGS----EII 100 (384)
T ss_pred HHHHHHhhcccC----ccc-ccCCccHHHHHHHHHHHhC-------ccceeeecccccccHHHHHHHhcCCCc----eEE
Confidence 444444444333 333 5554455899999999994 334688888888777777777777887 999
Q ss_pred EcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh-c--cCCceEEEEeCCCCCCC-CCCCHHHHH
Q psy13922 109 IPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSITEAR-K--HCNPRAIVIINPGNPTG-QVLTKENIQ 181 (509)
Q Consensus 109 v~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~-~--~~~~~~ivi~~p~NPtG-~~~s~~~l~ 181 (509)
+.+-+|.-..+ .....|+.+.++...++ ..+|++++++++.... + .+.+++|.+.|-+|-+| .++|.|+++
T Consensus 101 ~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~d--gtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~ 178 (384)
T KOG1368|consen 101 VGDRAHIHRYEQGGISQLAGVHVRTVKNEND--GTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELD 178 (384)
T ss_pred eccchheeehhccChhhhccceeEeeeeCCC--CeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHH
Confidence 99887764332 34556788887765544 3789999999998543 2 26789999987766666 999999999
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
++..||+++|+.+.+|-+-....-- ....++..+.... +.+.+ .+||.+ | .++|-+++ ++.+++
T Consensus 179 ~v~~lak~~glkLH~DGARi~NAav--asgV~vk~i~~~f-------DSVsi-CLSKgl-g---APVGSViV--G~k~FI 242 (384)
T KOG1368|consen 179 RVKALAKRHGLKLHMDGARIFNAAV--ASGVPVKKICSAF-------DSVSI-CLSKGL-G---APVGSVIV--GSKDFI 242 (384)
T ss_pred HHHHHHhccCCeeecchhhhhhHHH--HcCCCHHHHHHhh-------hhhhh-hhhccC-C---CCcccEEE--ccHHHH
Confidence 9999999999999999765432211 1234555554432 25666 889977 4 46899887 999999
Q ss_pred HHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHH
Q psy13922 262 AMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVL 341 (509)
Q Consensus 262 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (509)
++.+.++ |++.||++++-..+|.+.. + .++ --...
T Consensus 243 ~kA~~~R--------------------------------KalGGGmRQsGvLaaaaLv-a--------l~~----~~~~L 277 (384)
T KOG1368|consen 243 DKARHFR--------------------------------KALGGGMRQSGVLAAAALV-A--------LDE----NVPLL 277 (384)
T ss_pred HHHHHHH--------------------------------HHhcCchhHHHHHHHHHHH-H--------hhc----chHHH
Confidence 9887654 4455555555444332211 1 011 11234
Q ss_pred HHHHHHHHHHHHHHhcCCCCeecc--CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 342 DSLKQRAKMVADTFNSIEGMSCNP--VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 342 ~~~~~~~~~l~~~L~~~~g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
+.-.++...+.+.++..+++++.. .+.++.. +.+..+ +++ .++ +...+++.||.+.+|.
T Consensus 278 ~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~-~~l~q~----------~~~-~~~-l~~~~~k~gi~lm~~~ 338 (384)
T KOG1368|consen 278 RADHKRAKELAEYINTPEEIRVEVPAVETNIVN-MVLCQA----------RLT-AEE-LCKFLEKNGILLMGGA 338 (384)
T ss_pred HHHHHHHHHHHHHhccccceeeecchhhcceee-eecccc----------cCC-HHH-HHHHHHHCCeEEeecc
Confidence 455566777788888776677653 3555443 333322 222 233 3566788999998644
No 253
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=1.9e-16 Score=164.46 Aligned_cols=149 Identities=13% Similarity=0.126 Sum_probs=119.1
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----HHhcCCEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----LAEFNMEQIG 130 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~~~~g~~~~~ 130 (509)
...|.+.++++.+ .+..++++++++|+.+++.++.++|| +||++.++|.+.... +...|+++..
T Consensus 63 v~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all~~GD----~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~ 130 (432)
T PRK06702 63 LAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNICSSGD----HLLCSSTVYGGTFNLFGVSLRKLGIDVTF 130 (432)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhcCCCC----EEEECCCchHHHHHHHHHHHHHCCCEEEE
Confidence 3778888888873 34588899999999999999999998 999999999876665 6778999998
Q ss_pred EecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCc
Q psy13922 131 YYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSK 210 (509)
Q Consensus 131 v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~ 210 (509)
+.. .+|++.++++|++ ++++|++.+|+||++.+++ +++|+++|+++|+++|+|++|..-..
T Consensus 131 vd~------~~d~~~l~~~I~~-----~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~----- 191 (432)
T PRK06702 131 FNP------NLTADEIVALAND-----KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL----- 191 (432)
T ss_pred ECC------CCCHHHHHHhCCc-----CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh-----
Confidence 853 4589999999987 8999999999999999988 99999999999999999999852110
Q ss_pred cccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 211 FYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
..+ .. .+ --|+++|+||.++|..+
T Consensus 192 ~~p-l~----~G------ADIvv~S~TKy~~Ghsd 215 (432)
T PRK06702 192 CQA-FE----HG------ANIIVHSTTKYIDGHAS 215 (432)
T ss_pred CCh-hh----cC------CCEEEEccccccCCCcc
Confidence 111 11 11 14778999995554333
No 254
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.76 E-value=1.2e-15 Score=160.06 Aligned_cols=198 Identities=14% Similarity=0.159 Sum_probs=144.8
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh-----
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI----- 97 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~----- 97 (509)
.|.+++..++++.+.+.+ .+.. +++. ..+++++++++++ .+++++++|+++++..++.+++
T Consensus 39 ~~~~~~~~~~a~~~~~~~---~~~~-~G~~--~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~aL~al~~~~~~ 104 (438)
T PRK15407 39 GKVIDAKELQNLVDASLD---FWLT-TGRF--NDAFEKKLAEFLG--------VRYALLVNSGSSANLLAFSALTSPKLG 104 (438)
T ss_pred ccCCCHHHHHHHHHHHHh---Cccc-CChh--HHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHhhcccc
Confidence 344555556666665655 3333 4433 3789999999983 2469999999999999998773
Q ss_pred ----cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 98 ----EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 98 ----~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
++|| .|+++.|+|..+...+...|++++.+++++. +|.+|++.+++.+.. ++++|+++++ +|.
T Consensus 105 ~~~~~pGd----~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~-~~~id~~~le~~i~~-----~tkaVi~~~~---~G~ 171 (438)
T PRK15407 105 DRALKPGD----EVITVAAGFPTTVNPIIQNGLVPVFVDVELP-TYNIDASLLEAAVSP-----KTKAIMIAHT---LGN 171 (438)
T ss_pred ccCCCCCC----EEEECCCCcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHcCc-----CCeEEEEeCC---CCC
Confidence 5666 9999999999999999999999999998753 578999999999876 7999998753 444
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec--ccccCCCCCCeeEEE
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC--SKGYMGECGLRGGYS 251 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~G~~Glr~G~v 251 (509)
. .++++|.++|+++|++||+|++|+......+.. .-++ + .+.+.|| +|.++ .|- .|++
T Consensus 172 p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~~----g-------d~~~fSf~~~k~~~--~ge-GG~l 231 (438)
T PRK15407 172 P---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGTF----G-------DIATLSFYPAHHIT--MGE-GGAV 231 (438)
T ss_pred h---hhHHHHHHHHHHCCCEEEEECccchhhhcCCee---eecc----C-------ceEEEeCCCCCCcc--ccC-ceEE
Confidence 3 358999999999999999999998755332211 1111 0 1223455 47774 453 5888
Q ss_pred eeecCCHHHHHHHHHhhh
Q psy13922 252 EVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~ 269 (509)
++ .++++.++++.++.
T Consensus 232 ~t--~d~~l~~~~~~~~~ 247 (438)
T PRK15407 232 FT--NDPLLKKIIESFRD 247 (438)
T ss_pred EE--CCHHHHHHHHHHHH
Confidence 64 88999888877665
No 255
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.76 E-value=1.2e-15 Score=156.45 Aligned_cols=231 Identities=13% Similarity=0.105 Sum_probs=153.1
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
-+|.|++++.+++.+...- ...|.. .+...++++.|.+....+ ....+++++++++|++.+++....... +.
T Consensus 73 ~hP~Vv~Av~~q~~~~~h~-~~~~~~----~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tg--r~ 144 (447)
T COG0160 73 NHPRVVEAVKRQLAKLNHT-HTRDLY----YEPYVELAEKLTALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTG--RP 144 (447)
T ss_pred CCHHHHHHHHHHHHHhhcc-cCCccc----chhHHHHHHHHHHhCCcc-cCCeEEecCCcHHHHHHHHHHHHHHhC--CC
Confidence 4799999999999984311 112322 245555555555432211 345799999999999999999865442 44
Q ss_pred eEEEcCCCChhHHHHHHhc---------C-----CEEEEEecCCC--CCCCC--------CHHHHHHHHHhhhcc-CCce
Q psy13922 106 GVLIPIPQYPLYSASLAEF---------N-----MEQIGYYLDES--KQWGL--------PISELERSITEARKH-CNPR 160 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~---------g-----~~~~~v~~~~~--~~~~~--------d~~~L~~~i~~~~~~-~~~~ 160 (509)
.||...-.|++.......+ | ..+..+|.... ..|.. ..+.+++.+.....+ .++.
T Consensus 145 ~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vA 224 (447)
T COG0160 145 GVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVA 224 (447)
T ss_pred cEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCcee
Confidence 8999999999865443222 1 11344443221 11221 234455544443222 4688
Q ss_pred EEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 161 AIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 161 ~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
+|++...+.-.|. +.|++.++++.++|++||+++|+||++.+|..+| ++.++.... +.++ +| ++||.
T Consensus 225 aiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG--~~fa~E~~g--v~PD-----iv---t~aK~ 292 (447)
T COG0160 225 AIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG--KMFAFEHFG--VEPD-----IV---TLAKS 292 (447)
T ss_pred EEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc--cchhhhhcC--CCCC-----EE---Eeccc
Confidence 8999888888886 7888999999999999999999999999999886 566665532 1222 44 67999
Q ss_pred cCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhc
Q psy13922 240 YMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVS 281 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 281 (509)
+ | .|+++|.++ ..+++++........+++.|..++++
T Consensus 293 i-g-~G~Pl~avv---~r~ei~~~~~g~~~~Tf~GNpva~Aa 329 (447)
T COG0160 293 L-G-GGLPLSAVV---GRAEIMDWPPGGHGGTFGGNPVACAA 329 (447)
T ss_pred c-c-CCCceeEEe---ccHHhcccCCcccCCCCCcCHHHHHH
Confidence 9 6 699999998 79999884333333456666664444
No 256
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.75 E-value=1.5e-15 Score=155.63 Aligned_cols=169 Identities=18% Similarity=0.228 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH----hcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA----EFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~----~~g~~~~~v 131 (509)
..+.+.++++.+ .+.++++++|+.|+..++.+++++|| +|+++...|.+....++ ..|+++..+
T Consensus 58 ~~le~~la~Le~--------g~~a~~~~SGmaAi~~~l~~ll~~Gd----~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~ 125 (386)
T PF01053_consen 58 RALEQRLAALEG--------GEDALLFSSGMAAISAALLALLKPGD----HIVASDDLYGGTYRLLEELLPRFGVEVTFV 125 (386)
T ss_dssp HHHHHHHHHHHT---------SEEEEESSHHHHHHHHHHHHS-TTB----EEEEESSSSHHHHHHHHHCHHHTTSEEEEE
T ss_pred HHHHHHHHHhhc--------ccceeeccchHHHHHHHHHhhcccCC----ceEecCCccCcchhhhhhhhcccCcEEEEe
Confidence 567777777762 46799999999999999999999999 99999999999876655 469998887
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC-cEEEEcccCCcccccCCCc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREK-LFLFADEVYQDNVYAEGSK 210 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~-i~lI~Deay~~~~~~~~~~ 210 (509)
+. -|++.+++++++ ++++|++..|.||+..+.+ +++|+++|+++| +++|+|..+.....-
T Consensus 126 d~-------~d~~~l~~~l~~-----~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~---- 186 (386)
T PF01053_consen 126 DP-------TDLEALEAALRP-----NTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQ---- 186 (386)
T ss_dssp ST-------TSHHHHHHHHCT-----TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC----
T ss_pred Cc-------hhHHHHHhhccc-----cceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeee----
Confidence 53 279999999998 8999999999999988866 999999999998 999999999764221
Q ss_pred cccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC-HHHHHHHHHhhh
Q psy13922 211 FYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD-PGVKAMLHKSIS 269 (509)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~-~~~~~~l~~~~~ 269 (509)
.++. .+. -|+++|.+|.++|...+=.|.+++ .+ +++.+.++....
T Consensus 187 -~pL~-----~Ga------Divv~S~TKyl~Ghsdv~~G~vv~--~~~~~~~~~l~~~~~ 232 (386)
T PF01053_consen 187 -NPLE-----LGA------DIVVHSATKYLSGHSDVMGGAVVV--NGSSELYDRLREFRR 232 (386)
T ss_dssp --GGG-----GT-------SEEEEETTTTTTTSSSE-EEEEEE--SSHHHHHHHHHHHHH
T ss_pred -ccCc-----CCc------eEEEeeccccccCCcceeeEEEEE--Cchhhhhhhhcchhh
Confidence 1111 111 466889999998766666777763 44 688888876554
No 257
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=3.8e-16 Score=163.77 Aligned_cols=214 Identities=13% Similarity=0.128 Sum_probs=135.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+........|. .+.+..+++.+.+... -..+.++++++++||++.+++..+.- +..
T Consensus 60 ~p~v~~ai~~q~~~~~~~~~~~~~-----~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~ 132 (423)
T PRK05964 60 HPYIDQAIREQLDRLDHVIFAGFT-----HEPAERLAQRLVALTP--GGLDHVFFSDSGSVAVEVALKMALQYWRNRGEP 132 (423)
T ss_pred CHHHHHHHHHHHhhCCCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 589999999999873211111122 2344455555544322 12358999999999999999987542 211
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCE-------------EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeC-CC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNME-------------QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN-PG 168 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~-p~ 168 (509)
.+.+|+...-+|++....+...+.. +..++.........+++.+++.+.+.. .++.+|++.. .+
T Consensus 133 ~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~--~~iaavi~Ep~i~ 210 (423)
T PRK05964 133 GRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA--GEIAAFIVEPLVQ 210 (423)
T ss_pred CCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC--CcEEEEEEecccc
Confidence 3558999999999876544332111 112222111000012777888886421 2577777764 57
Q ss_pred CCCCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-C
Q psy13922 169 NPTGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG-L 246 (509)
Q Consensus 169 NPtG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G-l 246 (509)
+.+|... +++++++|.++|++||+++|+||++.++...+ ....... .++.+ ++ .++||.+ | .| +
T Consensus 211 ~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G--~~~a~~~--~~v~p-----Di---~~~~K~l-~-gG~~ 276 (423)
T PRK05964 211 GAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG--TLFACEQ--AGVSP-----DI---MCLSKGL-T-GGYL 276 (423)
T ss_pred cCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc--chhHHHh--cCCCC-----Ce---eeeehhh-h-cCcc
Confidence 7788754 89999999999999999999999998876553 1211111 11222 13 3678999 4 55 8
Q ss_pred eeEEEeeecCCHHHHHHHHH
Q psy13922 247 RGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 247 r~G~v~~~~~~~~~~~~l~~ 266 (509)
++|+++ .++++++.+..
T Consensus 277 p~~av~---~~~~i~~~~~~ 293 (423)
T PRK05964 277 PLAATL---CTAEIFEAFYS 293 (423)
T ss_pred cceEEE---EcHHHHHhhhc
Confidence 999987 79999988853
No 258
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.74 E-value=2.2e-15 Score=169.32 Aligned_cols=411 Identities=14% Similarity=0.081 Sum_probs=231.0
Q ss_pred HHHH-HHHHhhcCCCCCCC---CCCCH-HHHHHHHHHHhcccCCCcccCCC----CcchHHHHHHHHHHHhhhcCCCCCC
Q psy13922 6 SLSL-QVLALVSLPQLFDD---PRFPD-DVKQRAQAVLDGCRGQSVGSYTD----SPGIEIIRRHVAQYISRRDGQPADW 76 (509)
Q Consensus 6 ~~~~-~~~~~~~~~~~~~~---~~~p~-~v~~a~~~~l~~~~~~~~~~Y~~----~~g~~~lr~~va~~l~~~~g~~~~~ 76 (509)
..+| ..+.....--++++ ..+|+ .|.+++...+..........|.. ..-+.+.|+.++++++ .++
T Consensus 22 ~~~R~~~fp~l~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lg------a~~ 95 (805)
T PLN02724 22 DELRATEFARLKGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFN------APP 95 (805)
T ss_pred HHHHHHHhhhcCCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhC------CCc
Confidence 3455 34544443334443 34455 45555555555422122222221 2235678888888884 334
Q ss_pred C--cEEEeCCHHHHHHHHHHHh-hcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCC------CCCCCC--
Q psy13922 77 Q--DVILSAGASDGIKSVLKLL-IEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDES------KQWGLP-- 142 (509)
Q Consensus 77 ~--~i~~t~G~~~al~~~~~~l-~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~------~~~~~d-- 142 (509)
+ +|++|+|+|+++++++.++ .++|| .|+++.-.|.+.. ..++..|+++..++.+.. ....++
T Consensus 96 ~~~~VvFtsnaT~alnlva~~l~~~~gd----~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~ 171 (805)
T PLN02724 96 SDYACVFTSGATAALKLVGETFPWSSES----HFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVK 171 (805)
T ss_pred cceEEEEeCChHHHHHHHHHHCCCCCCC----eEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccc
Confidence 4 5899999999999999998 56676 9999876666543 344566999999887621 111233
Q ss_pred HHHHHHHHHh----h-hccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC-----CcEEEEcccCCcccccCCCccc
Q psy13922 143 ISELERSITE----A-RKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE-----KLFLFADEVYQDNVYAEGSKFY 212 (509)
Q Consensus 143 ~~~L~~~i~~----~-~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~-----~i~lI~Deay~~~~~~~~~~~~ 212 (509)
.+.|++.++. . ....++++|.++..+|.||..+|.+.+.++.+.++.+ ++++++|.++..-. ...
T Consensus 172 ~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~-----~pi 246 (805)
T PLN02724 172 SRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT-----SPP 246 (805)
T ss_pred hhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC-----CCC
Confidence 2556665421 0 0012568999999999999999965443333333222 36899999987622 223
Q ss_pred cHHHHHHHhCCCCCCceeEEEEecccccCC-CCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCC
Q psy13922 213 SFKKVLVEMGEPYKSMELASFMSCSKGYMG-ECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRF 291 (509)
Q Consensus 213 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G-~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (509)
.+..+. .+++++ |+.|++ | ..| +|+++ .++++.+.+.....+.+.... . ..+..|
T Consensus 247 Dv~~~~---------~Dfl~~-S~HK~~-GgP~G--~G~L~---vr~~~~~~l~p~~~GGg~~~~----~----~~~~~~ 302 (805)
T PLN02724 247 DLSRYP---------ADFVVV-SFYKIF-GYPTG--LGALL---VRRDAAKLLKKKYFGGGTVAA----S----IADIDF 302 (805)
T ss_pred ChhhcC---------CCEEEE-ecceec-cCCCC--ceEEE---EehhhhhhhcCCccCCCceEE----E----ecccce
Confidence 443332 225655 999999 6 556 56665 366676666432221111100 0 001111
Q ss_pred chhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCeecc
Q psy13922 292 PDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIE------GMSCNP 365 (509)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~------g~~~~~ 365 (509)
.. ........++.|+.+..+..++..+++ |.... .++++.++..++.+++.+.|.+++ +++++.
T Consensus 303 ~~-~~~~~~~rfE~GT~n~~~i~~l~aal~--------~l~~i-g~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg 372 (805)
T PLN02724 303 VK-RRERVEQRFEDGTISFLSIAALRHGFK--------LLNRL-TISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYG 372 (805)
T ss_pred ee-ccccHHHHhcCCCcchhHHHHHHHHHH--------HHHHh-ChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC
Confidence 00 001123457788888888777777754 22111 267788899999999999999885 477764
Q ss_pred C---------CceeEEeecCCCCHHHHHHHhhcCCC---CcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhh
Q psy13922 366 V---------QGAMYAFPQMKLPAKAIAKAKAEGKC---PSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHY 433 (509)
Q Consensus 366 ~---------~~g~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~ 433 (509)
+ .++++.| .+. +.+ -....+..++.++||.++.|..|.......++.+ .+
T Consensus 373 ~~~~~~~~~~r~~ivsF-nv~------------~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~----~~- 434 (805)
T PLN02724 373 NHTFKLEFHIQGPIVTF-NLK------------RADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGL----SH- 434 (805)
T ss_pred CCCCCCCcccccCEEEE-EEE------------cCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCC----CH-
Confidence 3 2445544 232 111 1122256778889999999988776211000000 00
Q ss_pred hHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHH
Q psy13922 434 TQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFH 501 (509)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~ 501 (509)
+.+.+....++.|-+..+.+ .+ .+ ++.+|+||+ ++.+||+.+++.|++.+
T Consensus 435 -~~l~~~~~~~~~c~~~~~~~-----------~~-----~~-~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 435 -KDLQANFEAGHVCWDDQDVI-----------HG-----RP-TGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred -HHHHHHhhcCCccCchhhee-----------cC-----cc-cceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 01111111122222222111 11 00 128999999 89999999999998865
No 259
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.73 E-value=1e-15 Score=149.88 Aligned_cols=208 Identities=13% Similarity=0.129 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeE
Q psy13922 28 DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGV 107 (509)
Q Consensus 28 ~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~V 107 (509)
|++++++.++-. .+... |+...-...+.+.+++.+ | .+.++|++++|++..+++.+.+++++ .|
T Consensus 14 ~~m~eam~~a~~---~~~~~-YG~D~~~~~~e~~~ae~~----g----~~a~~Fv~sGT~aN~lal~~~~~~~~----~v 77 (342)
T COG2008 14 PEMREALAAANA---VGDDV-YGEDPTTNALEQRIAELF----G----KEAALFVPSGTQANQLALAAHCQPGE----SV 77 (342)
T ss_pred HHHHHHHHhccc---cCCCC-CCCCHHHHHHHHHHHHHh----C----CceEEEecCccHHHHHHHHHhcCCCC----eE
Confidence 555555544432 24444 888877777777777777 3 37899999999999999999999998 88
Q ss_pred EEcCCCChhHHH--HHHhcC-CEEEEEecCCCCCCCCCHHHHHHHHHhhh-ccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 108 LIPIPQYPLYSA--SLAEFN-MEQIGYYLDESKQWGLPISELERSITEAR-KHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 108 lv~~p~y~~~~~--~~~~~g-~~~~~v~~~~~~~~~~d~~~L~~~i~~~~-~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
++..-.|....+ .++..+ ... ++..+..+..+++++++..+.... .+..+.++++.+.+|..|++||.+++++|
T Consensus 78 i~~~~aHi~~~E~Ga~~~~~~~~~--~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i 155 (342)
T COG2008 78 ICHETAHIYTDECGAPEFFGGGQK--LPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAI 155 (342)
T ss_pred EEeccccceecccCcHHHHcCCce--eccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHH
Confidence 888766654332 233332 222 233333344899999999988622 12455566665566688999999999999
Q ss_pred HHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHH
Q psy13922 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAM 263 (509)
Q Consensus 184 ~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~ 263 (509)
.++|+++|+.|..|-+=-....-. ..++...+.. ..+++++ ++||.. |+.+|.+++ .+++++.+
T Consensus 156 ~~~~k~~~l~LHmDGAR~~nA~va--lg~~~~~~~~-------~~D~v~~-~~tK~g----~~~~gAiv~--gn~~~~~~ 219 (342)
T COG2008 156 SAVCKEHGLPLHMDGARLANALVA--LGVALKTIKS-------YVDSVSF-CLTKGG----GAPVGAIVF--GNRDFAKR 219 (342)
T ss_pred HHHHHHhCCceeechHHHHHHHHH--cCCCHHHHHh-------hCCEEEE-ecccCC----cceeeeEEE--cCHHHHHH
Confidence 999999999999996522111100 0133333322 3458877 889975 456788877 99999999
Q ss_pred HHHhhh
Q psy13922 264 LHKSIS 269 (509)
Q Consensus 264 l~~~~~ 269 (509)
++..+-
T Consensus 220 a~~~rK 225 (342)
T COG2008 220 ARRWRK 225 (342)
T ss_pred HHHHHH
Confidence 987655
No 260
>PRK06541 hypothetical protein; Provisional
Probab=99.73 E-value=1.5e-15 Score=160.10 Aligned_cols=215 Identities=14% Similarity=0.108 Sum_probs=133.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+........|. .+....+++.+.+... -..+.+++++++++|++.+++..+.. |.+
T Consensus 70 ~p~v~~Av~~q~~~~~~~~~~~~~-----~~~~~~la~~l~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~ 142 (460)
T PRK06541 70 RAELAEAAAKQAGTLAFFPLWSYA-----HPPAIELAERLAALAP--GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKP 142 (460)
T ss_pred CHHHHHHHHHHHhhCcCccccccC-----CHHHHHHHHHHHHhCC--CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 689999999999873211111122 2334445544443322 12358999999999999999887542 322
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCCCCC---CCCC--------HHHHHHHHHhhhccCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDESKQ---WGLP--------ISELERSITEARKHCN 158 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~---~~~d--------~~~L~~~i~~~~~~~~ 158 (509)
.+..|+...-+|++....+... |. .+..+|...... |.-+ ++.+++.++.... .+
T Consensus 143 ~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~ 221 (460)
T PRK06541 143 GKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGP-DT 221 (460)
T ss_pred CccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCC-CC
Confidence 3568999999999876543322 11 112222111000 1112 2566766653211 14
Q ss_pred ceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 159 PRAIVIINPGNPTGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
+.+|++...++++|... +++.+++|.++|++||+++|+||++..|...+ ....... .++.++ ++ ++|
T Consensus 222 ~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G--~~~a~~~--~gv~PD-----iv---t~g 289 (460)
T PRK06541 222 VAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLG--EMFGCER--FGYVPD-----II---TCA 289 (460)
T ss_pred EEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc--hhhhhhh--cCCCCC-----EE---Eec
Confidence 55666655589999865 59999999999999999999999998875433 1112111 122221 33 679
Q ss_pred cccCCCCCC-eeEEEeeecCCHHHHHHHHH
Q psy13922 238 KGYMGECGL-RGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 238 K~~~G~~Gl-r~G~v~~~~~~~~~~~~l~~ 266 (509)
|.+ | .|+ ++|+++ .++++++.+..
T Consensus 290 K~l-~-~G~~pigav~---~~~~i~~~~~~ 314 (460)
T PRK06541 290 KGI-T-SGYSPLGAMI---ASDRLFEPFLD 314 (460)
T ss_pred ccc-c-CCccceeEEE---EcHHHHHHhhc
Confidence 999 5 887 999998 78888887753
No 261
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.73 E-value=3.3e-15 Score=156.04 Aligned_cols=294 Identities=15% Similarity=0.122 Sum_probs=173.9
Q ss_pred CCCCCCHHHHHHHHHHH-hcccCC-Cccc-CCCCcchHHHHH----HHHHHHhhhcCCCCCCCcE-EEeCCHHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVL-DGCRGQ-SVGS-YTDSPGIEIIRR----HVAQYISRRDGQPADWQDV-ILSAGASDGIKSVL 93 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l-~~~~~~-~~~~-Y~~~~g~~~lr~----~va~~l~~~~g~~~~~~~i-~~t~G~~~al~~~~ 93 (509)
.++.++|.+++++...+ .....+ ...+ |+......+|.+ .+++++ | .+.. +++++|+.|+..++
T Consensus 36 sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~----g----~~~alv~~~SG~~A~~~~l 107 (416)
T PRK13034 36 SENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLF----G----CDYANVQPHSGSQANGAVY 107 (416)
T ss_pred cccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHh----C----CCceEEecCCcHHHHHHHH
Confidence 66668999999998885 443211 1111 222233455666 666666 3 2345 45678889999999
Q ss_pred HHhhcCCCCCCCeEEEcCCCChhH-HHHHHh--cCCEE--EEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 94 KLLIEDVDGKKPGVLIPIPQYPLY-SASLAE--FNMEQ--IGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 94 ~~l~~~gd~~~~~Vlv~~p~y~~~-~~~~~~--~g~~~--~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
.+++++|| .|+++..+|.+. ...++. .+... ..++++.. ++.+|++.+++.+... ++++|++..+.
T Consensus 108 ~al~~~GD----~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~----~~klVi~~~~~ 178 (416)
T PRK13034 108 LALLKPGD----TILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEH----KPKLIIAGFSA 178 (416)
T ss_pred HHhcCCCC----EEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhc----CCeEEEECCCc
Confidence 99999999 999999988762 221111 12222 23333322 3568999999988653 67888876554
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 169 NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 169 NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
+ |... ++.+|.++|+++|+++|+|++++...+..+....++ ... .++++|++|.++| -..
T Consensus 179 ~--g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~-----------~~~-Di~~~s~~K~l~g---~~G 238 (416)
T PRK13034 179 Y--PREL---DFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF-----------PHA-HVVTTTTHKTLRG---PRG 238 (416)
T ss_pred c--cccc---CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC-----------CCc-eEEEEeCcccCCC---CCC
Confidence 3 4554 488888899999999999999877555322111111 012 3557799999842 235
Q ss_pred EEEeeecCCHHHHHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCC
Q psy13922 249 GYSEVINLDPGVKAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPG 326 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 326 (509)
|+++. .++.+.+.++...... ........++ ...++...++
T Consensus 239 G~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~aa------------------------------~~~al~~~~~----- 281 (416)
T PRK13034 239 GMILT--NDEEIAKKINSAVFPGLQGGPLMHVIAA------------------------------KAVAFGEALQ----- 281 (416)
T ss_pred eEEEE--CcHHHHHHHHhhcCCcccCCccHHHHHH------------------------------HHHHHHHHhC-----
Confidence 76652 5566666655432211 1111110000 1111111111
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc--CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhh
Q psy13922 327 EPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP--VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLER 404 (509)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~ 404 (509)
....+.++.+.++.+++.+.|.++ |+.+.. +++.. .++.+..+ + .....+.+.|++
T Consensus 282 --------~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i-~~v~~~~~----------~--~~~~~~~~~L~~ 339 (416)
T PRK13034 282 --------PEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHL-LLVDLRPK----------G--LSGKDAEQALER 339 (416)
T ss_pred --------hhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcE-EEEEcCCC----------C--CCHHHHHHHHHh
Confidence 113456788889999999999988 888764 33333 33334311 1 132335677888
Q ss_pred cCeEEec
Q psy13922 405 TGICIVP 411 (509)
Q Consensus 405 ~gI~v~p 411 (509)
.||.+.+
T Consensus 340 ~GI~v~~ 346 (416)
T PRK13034 340 AGITVNK 346 (416)
T ss_pred CCcEEec
Confidence 9999875
No 262
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.73 E-value=2.8e-15 Score=157.78 Aligned_cols=225 Identities=13% Similarity=0.088 Sum_probs=132.6
Q ss_pred CHHHHHHHHHHHhcccCCCcc--cCCCCcchHHHHHHHHHHHhhhcCCCCCCCc-EEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVG--SYTDSPGIEIIRRHVAQYISRRDGQPADWQD-VILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~--~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~-i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
+|.|.+++.+++.. .... .|-+ .+.+.++|+.|.+..+....... ++++++++||.+.+++..+.-..
T Consensus 57 ~p~i~~ai~~q~~~---~~~~~~~~~~----~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tg-- 127 (442)
T TIGR00709 57 HPNMKQKILDYLQS---GLPLHTLDLT----TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTG-- 127 (442)
T ss_pred CHHHHHHHHHHHHh---ccCccccccC----cHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcC--
Confidence 68999999999887 2211 1112 23455556555544321111124 45568999999999998765432
Q ss_pred CCeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCCCC--CCC----CCHHH----HHHHHHhhhc-cCCc
Q psy13922 104 KPGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDESK--QWG----LPISE----LERSITEARK-HCNP 159 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~--~~~----~d~~~----L~~~i~~~~~-~~~~ 159 (509)
|.+|+....+|++....+... |. .+..++..... .|. .+.+. +++.+..... ..++
T Consensus 128 r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 207 (442)
T TIGR00709 128 RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKP 207 (442)
T ss_pred CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCce
Confidence 457999999999887555433 20 12222221110 000 01222 3333322111 1257
Q ss_pred eEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 160 RAIVII-NPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 160 ~~ivi~-~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
.+|++. .++|+....+|++++++|.++|++||+++|.||++.+|...+ .+.+...+ ++.++ ++ ++||
T Consensus 208 aavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG--~~~a~~~~--gv~PD-----iv---~~gK 275 (442)
T TIGR00709 208 AAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG--TMFAFEHA--GIEPD-----FV---VMSK 275 (442)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC--chhHHHHc--CCCCc-----EE---EEcc
Confidence 777775 555555567899999999999999999999999999997764 33333332 22222 44 4699
Q ss_pred ccCCCCCCeeEEEeeecCCHHHHHHHHHh-hhcccCcchhh
Q psy13922 239 GYMGECGLRGGYSEVINLDPGVKAMLHKS-ISAMLCPTVLA 278 (509)
Q Consensus 239 ~~~G~~Glr~G~v~~~~~~~~~~~~l~~~-~~~~~~~~~~~ 278 (509)
.+ | .|+++|+++ .++++ +.+... ...+.+.+.++
T Consensus 276 ~l-~-~G~Pigav~---~~~~~-~~~~~~~~~~T~~gnpla 310 (442)
T TIGR00709 276 AV-G-GGLPLAVLL---IAPEF-DAWQPAGHTGTFRGNQLA 310 (442)
T ss_pred cc-c-CCcccEEEE---EchHH-hccCCCcCCCCCCcCHHH
Confidence 99 5 599999998 56663 444221 12334455553
No 263
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.72 E-value=2.5e-15 Score=154.55 Aligned_cols=299 Identities=16% Similarity=0.174 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh-cCCCCCCCe
Q psy13922 28 DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-EDVDGKKPG 106 (509)
Q Consensus 28 ~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~~~~~ 106 (509)
++.++++.+.+++ +++..+++ -..++.++++++++ .++++.++++|.||.+++.++- ++|| .
T Consensus 5 ~e~~~~v~~~l~s---~~~~~~g~--~~~~fE~~~a~~~g--------~~~~~~~~sgt~Al~~al~~l~~~~gd----e 67 (363)
T PF01041_consen 5 EEEIDAVLEVLRS---GWLSTYGP--YVEEFEKEFAEYFG--------VKYAVAVSSGTSALHLALRALGLGPGD----E 67 (363)
T ss_dssp HHHHHHHHHHHHH---TCCSSSSH--HHHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHTTGGTTS----E
T ss_pred HHHHHHHHHHHHh---CCccCCCH--HHHHHHHHHHHHhC--------CCeEEEeCChhHHHHHHHHhcCCCcCc----e
Confidence 5678888888988 56654443 34789999999993 5689999999999999999984 6777 9
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+++..+|......+..+|++++.++++++ ++.+|++.+++.+++ ++++|++.+. -|.. .++++|.++
T Consensus 68 Vi~p~~t~~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~-----~t~ai~~~h~---~G~~---~d~~~i~~~ 135 (363)
T PF01041_consen 68 VIVPAYTFPATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITP-----KTKAILVVHL---FGNP---ADMDAIRAI 135 (363)
T ss_dssp EEEESSS-THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHT-----TEEEEEEE-G---GGB------HHHHHHH
T ss_pred EecCCCcchHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhcc-----CccEEEEecC---CCCc---ccHHHHHHH
Confidence 999999999999999999999999999966 689999999999998 7999997644 2333 359999999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec--ccccCCCCCCeeEEEeeecCCHHHHHHH
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC--SKGYMGECGLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~G~~Glr~G~v~~~~~~~~~~~~l 264 (509)
|+++|++||+|.+++......+ ... +. .. .+.+.|| +|.++ .| ..|.+++ .++++.+++
T Consensus 136 ~~~~~i~lIeD~a~a~g~~~~g-~~~---------G~---~g-d~~~fSf~~~K~i~--~g-eGG~v~~--~~~~~~~~~ 196 (363)
T PF01041_consen 136 ARKHGIPLIEDAAQAFGARYKG-RPV---------GS---FG-DIAIFSFHPTKIIT--TG-EGGAVVT--NDPELAERA 196 (363)
T ss_dssp HHHTT-EEEEE-TTTTT-EETT-EET---------TS---SS-SEEEEESSTTSSS---SS-S-EEEEE--STHHHHHHH
T ss_pred HHHcCCcEEEccccccCceeCC-Eec---------cC---CC-CceEecCCCCCCCc--CC-CCeeEEe--cHHHHHHHh
Confidence 9999999999999988654322 111 10 11 3445576 69884 45 4577754 899999999
Q ss_pred HHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHH
Q psy13922 265 HKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSL 344 (509)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (509)
+.++......... ........+ .++-.++. .++++. ....+++++..+.-
T Consensus 197 ~~~~~~g~~~~~~-----~~~~~~~~~----------g~n~rm~~--~~AAig-------------l~QL~~L~~~~~~R 246 (363)
T PF01041_consen 197 RALRNHGRSRDAF-----RRYRHELPP----------GYNFRMSE--LQAAIG-------------LAQLKRLDEIIARR 246 (363)
T ss_dssp HHHTBTTEETSEC-----STTEESSSS------------B-B-BH--HHHHHH-------------HHHHHTHHHHHHHH
T ss_pred hhhhccCcCcccc-----ccccccccC----------CcccccHH--HHHHHH-------------HHHHHHhhhhHHHH
Confidence 8876522111000 000000000 00000000 223322 12334478888888
Q ss_pred HHHHHHHHHHHhcCCCCeecc--CCce--eEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 345 KQRAKMVADTFNSIEGMSCNP--VQGA--MYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 345 ~~~~~~l~~~L~~~~g~~~~~--~~~g--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
+++...+.+.|.+++++...+ +... .+..+.+.++.. .. .+.+-+.+.|.+.||...+..
T Consensus 247 ~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~-------~~--~~rd~l~~~L~~~GI~~~~~~ 310 (363)
T PF01041_consen 247 RENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDE-------AL--ADRDELVEALRARGIETRPHY 310 (363)
T ss_dssp HHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCC-------GC--STHHHHHHHHHHTTBEEBCST
T ss_pred HHHHHHHHHHHhcCCCccccccccccccccccccccccccc-------cc--chHHHHHHHHHHCCCcccccc
Confidence 889999999999998875432 2221 111122222210 00 123335677788899998744
No 264
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=1e-14 Score=146.83 Aligned_cols=345 Identities=15% Similarity=0.166 Sum_probs=222.4
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
|+-..|+.|+.++.+ ...++.++.- .++.+.+.+.++..++.. ..+-++++++++.+++.++.++.++||
T Consensus 12 GP~~v~~~V~~am~~-------~~~~h~s~~F--~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgd 81 (383)
T COG0075 12 GPVPVPPRVLLAMAR-------PMVGHRSPDF--VGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGD 81 (383)
T ss_pred CCCCCCHHHHHHhcC-------CCCCCCCHHH--HHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCC
Confidence 444467777776632 2233344322 445555555555555522 234567778889999999999999999
Q ss_pred CCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 102 GKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
+|++......+ +.+.++.+|+++..+...... .+|++.+++.+++. ++.++|.+++.-.+||+..|
T Consensus 82 ----kVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~--~v~p~~v~~~L~~~---~~~~~V~~vH~ETSTGvlnp--- 149 (383)
T COG0075 82 ----KVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGE--AVDPEEVEEALDKD---PDIKAVAVVHNETSTGVLNP--- 149 (383)
T ss_pred ----eEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCC--CCCHHHHHHHHhcC---CCccEEEEEeccCcccccCc---
Confidence 98888776665 678899999999998776432 68999999999952 25788888988889999976
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|++||.++|+|.+-+... ....+.+. +.++++. +-=|.+++.||+ |.+. .+++
T Consensus 150 l~~I~~~~k~~g~l~iVDaVsS~Gg-----~~~~vd~w---------giDv~it-gSQK~l~~PPGl--a~v~---~S~~ 209 (383)
T COG0075 150 LKEIAKAAKEHGALLIVDAVSSLGG-----EPLKVDEW---------GIDVAIT-GSQKALGAPPGL--AFVA---VSER 209 (383)
T ss_pred HHHHHHHHHHcCCEEEEEecccCCC-----cccchhhc---------CccEEEe-cCchhccCCCcc--ceeE---ECHH
Confidence 9999999999999999998876521 22233322 2336654 448999877874 6565 4777
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCC-CCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH-HH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDD-PRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR-EK 337 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~-~~ 337 (509)
-.+++...... +..+-.......+++ ..|+ .++......++..+++ ...+ -+
T Consensus 210 a~e~~~~~~~~---~~ylDL~~~~~~~~~~~~~p-------------~Tppv~~i~aL~~al~----------~i~~EGl 263 (383)
T COG0075 210 ALEAIEERKHP---SFYLDLKKWLKYMEKKGSTP-------------YTPPVNLIYALREALD----------LILEEGL 263 (383)
T ss_pred HHHHHhcCCCC---ceeecHHHHHHHHhhcCCCC-------------CCCCHHHHHHHHHHHH----------HHHHhhH
Confidence 77766543221 000000000011111 0110 0111113344444432 2222 26
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCC---ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQ---GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAG 414 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~ 414 (509)
+...++.+++.+++.+.++.+ |++..... ......+ ..|. |+.+.+. ...+++++|+.+.+|..
T Consensus 264 e~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~--~~P~---------g~~~~~~-~~~~~~~~g~~i~gg~~ 330 (383)
T COG0075 264 EARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAI--KVPE---------GVDDKKV-RRALLKEYGVEIAGGQG 330 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEE--ECCC---------CCCcHHH-HHHHHHhCCEEeccccc
Confidence 888899999999999999999 88876522 2233332 2333 5553344 34788899999887653
Q ss_pred CCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHH
Q psy13922 415 FGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKA 492 (509)
Q Consensus 415 f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~ 492 (509)
... .+ +|||+.- .+++++..
T Consensus 331 ~l~--------------------------------------------------gk--------ifRIGhMG~~~~~dv~~ 352 (383)
T COG0075 331 PLK--------------------------------------------------GK--------IFRIGHMGNVRPEDVLA 352 (383)
T ss_pred ccC--------------------------------------------------cc--------EEEEecCccCCHHHHHH
Confidence 222 12 8999977 78999999
Q ss_pred HHHHHHHHHHHHH
Q psy13922 493 MLEKFREFHEEFL 505 (509)
Q Consensus 493 ~~~~l~~~~~~~~ 505 (509)
++..|..++.+..
T Consensus 353 ~l~ale~~L~~~g 365 (383)
T COG0075 353 ALAALEAALRELG 365 (383)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999987753
No 265
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=1.4e-14 Score=151.66 Aligned_cols=153 Identities=22% Similarity=0.177 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH----HHHHhcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS----ASLAEFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~----~~~~~~g~~~~~v 131 (509)
..|++.++++.+ .+..++++++++|+.+++.++.++|| +|+++.+.|.+.. ..+...|++++.+
T Consensus 66 ~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all~pGd----~VIv~~~~y~~t~~~~~~~~~~~G~~v~~v 133 (427)
T PRK05994 66 AVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLLQPGD----EFIAARKLYGGSINQFGHAFKSFGWQVRWA 133 (427)
T ss_pred HHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCC----EEEEecCcchhHHHHHHHHHHhcCcEEEEE
Confidence 668888888873 23578888889999999999999998 9999999998644 3466789999888
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
+.. |++.+++.+++ ++++|++++|+||+|.+++ +++|+++|+++|+++|+|++|..... .
T Consensus 134 d~~-------d~~~l~~ai~~-----~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~-----~ 193 (427)
T PRK05994 134 DAD-------DPASFERAITP-----RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL-----I 193 (427)
T ss_pred CCC-------CHHHHHHhcCc-----CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 642 78899998876 7999999999999999987 88999999999999999999974221 1
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
.++ +.+ . -+++.|++|.++ -+|-.+|.++
T Consensus 194 ~pl-----~~g-----a-Divv~S~tK~lg-g~~~~~gG~v 222 (427)
T PRK05994 194 RPI-----EHG-----A-DIVVHSLTKFLG-GHGNSMGGII 222 (427)
T ss_pred Ccc-----ccC-----C-cEEEEcCccccC-CCCCcEEEEE
Confidence 111 111 1 255679999994 4555566665
No 266
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.72 E-value=3.2e-14 Score=146.33 Aligned_cols=337 Identities=15% Similarity=0.152 Sum_probs=215.5
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH-HHhcCCE
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS-LAEFNME 127 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~-~~~~g~~ 127 (509)
|+.+....+|.++++++++ .+.++.|++++.|+++++...+++|| .| +..+|...... +...|+.
T Consensus 74 Yagd~s~~~LE~~vAe~lG--------~e~aV~v~sGTaAl~ll~~l~v~pGd----~V--p~n~~f~Tt~ahI~~~Ga~ 139 (460)
T PRK13237 74 YAGSRNFYHLEETVQEYYG--------FKHVVPTHQGRGAENLLSRIAIKPGQ----YV--PGNMYFTTTRYHQELNGGI 139 (460)
T ss_pred hcCCCcHHHHHHHHHHHHC--------CCeEEEeCCHHHHHHHHHHhCCCCcC----EE--CCccchHhhHHHHHhCCcE
Confidence 8888888999999999993 45799999999999988776778887 64 55444444444 7778886
Q ss_pred EEEEecC--------CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC-CCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 128 QIGYYLD--------ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPT-GQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 128 ~~~v~~~--------~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt-G~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.+-+..+ ...++.+|++.|++.|++... .++++|.+.+++|.. |...|.+++++|.++|++||+.||+|.
T Consensus 140 fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~-~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~Da 218 (460)
T PRK13237 140 FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA-ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDA 218 (460)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhccccC-CccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEEC
Confidence 5555322 123578999999999985311 256677777888888 799999999999999999999999999
Q ss_pred cCCcccc------cCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhccc
Q psy13922 199 VYQDNVY------AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAML 272 (509)
Q Consensus 199 ay~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~ 272 (509)
+...-.- .++....++.++..++... .+.+++ |++|.+ +. +. .|++++ .++++.++++...-.+-
T Consensus 219 Ara~gna~fI~~re~~y~~~~i~ei~~e~~s~---aD~~t~-S~~K~~-~~-~~-GG~i~t--~D~eL~~~~r~~~~~~e 289 (460)
T PRK13237 219 TRCVENAYFIKEREEGYQDKSIKEIVHEMFSY---ADGCTM-SGKKDC-LV-NI-GGFLAM--NDEELFDEAKELVVVYE 289 (460)
T ss_pred cchhcChhhhcccccccCCCcHhHHhhhccCc---CcEEEE-eCCCCC-CC-CC-ceEEEE--CCHHHHHHHHHhccccC
Confidence 8754210 1122334555555555443 335655 899998 33 33 577754 89999999988754332
Q ss_pred CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy13922 273 CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVA 352 (509)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 352 (509)
+-.+.+..+.. -..|++..+. ++.+ ....+....+.++|.
T Consensus 290 G~~tygg~~gr----------------------------d~~alAvgl~----------E~~~--~~y~~~ri~~~~~l~ 329 (460)
T PRK13237 290 GMPSYGGMAGR----------------------------DMEAMAIGIE----------ESVQ--YEYIEHRVGQVRYLG 329 (460)
T ss_pred CCcCCCChhhh----------------------------HHHHHHhHHH----------hhch--HHHHHHHHHHHHHHH
Confidence 32232211100 1223333222 1111 133334444567778
Q ss_pred HHHhcCCCCeeccCCceeEEeecCC--CCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec-CCC-CCCCCCccccccch
Q psy13922 353 DTFNSIEGMSCNPVQGAMYAFPQMK--LPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP-GAG-FGQVPGTYHFRQQV 428 (509)
Q Consensus 353 ~~L~~~~g~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p-g~~-f~~~~~~~~~r~~~ 428 (509)
+.|.+. |+.+..|.||--++++.. +|. +.. ..-+..-++.++..+.||-..- |+. ++-.
T Consensus 330 ~~L~~~-Gvpv~~p~ggH~v~vda~~~lph-----~~~-~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~---------- 392 (460)
T PRK13237 330 EKLLAA-GVPIVEPVGGHAVFLDARRFLPH-----LPQ-DQFPAQALAAELYIESGVRSMERGIVSAGRD---------- 392 (460)
T ss_pred HHHHHC-CCceecCCCceEEEEEhHHhCCC-----CCc-ccChHHHHHHHHHHHhCcCeEeecceecccC----------
Confidence 888877 999998998888887663 111 000 1124455677888888986553 221 1111
Q ss_pred hhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee---cChHHHHHHHHHHHHHHHH
Q psy13922 429 WWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL---PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~---~~~~~i~~~~~~l~~~~~~ 503 (509)
+..+....+.--.+||.+- -|.+.++-..++|..+.++
T Consensus 393 -------------------------------------~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 393 -------------------------------------PKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred -------------------------------------CCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 1111111122237999987 5888888888888888765
No 267
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.72 E-value=2.5e-15 Score=155.82 Aligned_cols=201 Identities=12% Similarity=0.093 Sum_probs=135.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC---CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV---DGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g---d~~ 103 (509)
+|.+.+++.+++... ... +. ....+....+++.+.+.. ..+.+++++++++|+..+++.++..+ .+.
T Consensus 54 ~p~v~~a~~~q~~~~---~~~-~~--~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~ 123 (395)
T PRK03715 54 NPGMVEALAAQAEKL---INP-SP--AFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEANEGAIKLARKWGRKHKNG 123 (395)
T ss_pred CHHHHHHHHHHHHhc---ccc-cc--cccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCC
Confidence 588999999988762 211 11 122557778888886432 24689999999999999999886321 112
Q ss_pred CCeEEEcCCCChhHHHHHHhc-CCEEEE---EecCCCCCC----CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC-
Q psy13922 104 KPGVLIPIPQYPLYSASLAEF-NMEQIG---YYLDESKQW----GLPISELERSITEARKHCNPRAIVIINPGNPTGQV- 174 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~-g~~~~~---v~~~~~~~~----~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~- 174 (509)
+..|+.....|++........ |..... .|..+ ++ ..|++.+++.+.+ ++++|++...++..|..
T Consensus 124 r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~-----~~aavi~Epv~~~gG~~~ 196 (395)
T PRK03715 124 AYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVP--GFPKAELNDIASVEKLITD-----KTVAVMLEPVQGEGGVIP 196 (395)
T ss_pred CcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCC--CceeeCCchHHHHHHHcCC-----CceEEEEeCCcCCCCCcc
Confidence 347898999998875444333 322111 11111 11 2478888888865 68888888777777875
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
.+++.+++|.++|++||+++|+||++.+|...|. ...... .++.++ +.+++|.+ | .|+++|.++
T Consensus 197 ~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~--~~a~~~--~gv~PD--------i~t~gK~l-g-~G~p~~av~-- 260 (395)
T PRK03715 197 ATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGT--LFAYEL--SGIEPD--------IMTLGKGI-G-GGVPLAALL-- 260 (395)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcc--hhhHhh--cCCCCc--------eeeehhhh-h-CCcceEEEE--
Confidence 4799999999999999999999999998755442 211111 122221 34779999 5 789999997
Q ss_pred cCCHHHH
Q psy13922 255 NLDPGVK 261 (509)
Q Consensus 255 ~~~~~~~ 261 (509)
.++++.
T Consensus 261 -~~~~i~ 266 (395)
T PRK03715 261 -AKAEVA 266 (395)
T ss_pred -Eccccc
Confidence 576765
No 268
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.71 E-value=1.8e-15 Score=154.99 Aligned_cols=267 Identities=13% Similarity=0.101 Sum_probs=163.5
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCC-------cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCC-HHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDS-------PGIEIIRRHVAQYISRRDGQPADWQDVILSAG-ASDGIKSVL 93 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~-------~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G-~~~al~~~~ 93 (509)
|+...|+.|++++.+.+.......-+.|... .-..+.|+.+++++ +. -++++|++|+| +|++++.++
T Consensus 6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~----~~-~~~~~vvf~~gs~T~a~~~~~ 80 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELL----NI-PDNYKVLFLQGGATGQFAAVP 80 (355)
T ss_pred CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CC-CCCceEEEEcCCchHHHHHHH
Confidence 5556799999999998855221112223333 23456777777777 32 14568999988 999999999
Q ss_pred HHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCC-HHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 94 KLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLP-ISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 94 ~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d-~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
..+..+++ +.+.| +..+....+...++..|.++..++.++.+.|. + ++..+..+.+ ++++|.+++..|.||
T Consensus 81 ~~l~~~~~-~~~~i-~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~-~~~~~~~~~~~~-----~~~lV~~~h~~t~tG 152 (355)
T cd00611 81 LNLLGDKG-TADYV-VTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYT-KIPDVETWDLAP-----DAAYVHYCSNETIHG 152 (355)
T ss_pred HhcCCCCC-eEEEE-ECCHHHHHHHHHHHhcCCCcEEEecccccCCC-CCCCHhhcCCCC-----CCCEEEEeCCccccc
Confidence 99987443 12234 33444444555778889999988876443331 2 2222223333 799999999999999
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
..++ .+++.+|+++++|.+.+.... ...+..+ ++ .+.|..|.+ |++| +|.++
T Consensus 153 ~~~~--------~i~~~~g~~~~VDa~qs~g~~-----~idv~~~-----------~~-~~ss~~K~l-GP~G--~g~l~ 204 (355)
T cd00611 153 VEFD--------EVPDTGGVPLVADMSSNILSR-----PIDVSKF-----------GV-IYAGAQKNL-GPAG--VTVVI 204 (355)
T ss_pred EEcc--------eecccCCCeEEEEccccccCC-----CCCHHHh-----------CE-EEeeccccc-CCCc--eEEEE
Confidence 9743 244459999999999987332 2333332 13 345679999 8887 46665
Q ss_pred eecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 253 VINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
.++++.+++..... +.. + |. ......-..++++..+..++.++++ |-.
T Consensus 205 ---~~~~~~~~~~~~~~-----~~~---------~---~~----~~~~~~~~~~Tpn~~~i~~L~aal~--------~l~ 252 (355)
T cd00611 205 ---VRKDLLGKARKITP-----SML---------N---YK----THADNNSLYNTPPTFAIYMMGLVLK--------WLK 252 (355)
T ss_pred ---ECHHHHhhcccCCC-----Ccc---------c---HH----HHHhcCCCCCCChHHHHHHHHHHHH--------HHH
Confidence 47777776543210 000 0 00 0000000012333335566666544 211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNSIEGM 361 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 361 (509)
....++.+.++.+++.+++.+.|+++||+
T Consensus 253 ~~gg~e~i~~~~~~l~~~l~~~l~~~~gl 281 (355)
T cd00611 253 EQGGVEAMEKRNRQKAQLLYDTIDNSNGF 281 (355)
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 11027788899999999999999999885
No 269
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.71 E-value=3.6e-14 Score=147.90 Aligned_cols=357 Identities=12% Similarity=0.041 Sum_probs=214.4
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE--eCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL--SAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~--t~G~~~al~~~~~~l~~~ 99 (509)
..|..| .+.+.+...+....+.+ .......++.+.+.+++.+.+|.+-..+++.+ |+|+||++.+++.+....
T Consensus 50 tt~~~p-~~~~~~~~~l~~~~~np----~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~ 124 (431)
T TIGR01788 50 TTWMEP-EARKLMDETINKNMIDK----DEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWR 124 (431)
T ss_pred CCCCCH-HHHHHHHHHHhcCCCCc----ccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHH
Confidence 344434 47788878876522222 11222346777777777777674311145554 899999999988765411
Q ss_pred --------CC-CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 100 --------VD-GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 100 --------gd-~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
+. ..+..|+++.-.|.++...++..|+++..+|.+++ ++.+|++.|++.+++ ++.+|+++..+|.
T Consensus 125 ~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~-~~~vd~~~L~~~i~~-----~t~lV~~t~g~t~ 198 (431)
T TIGR01788 125 WRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPG-RYVIDPEQVVEAVDE-----NTIGVVCILGTTY 198 (431)
T ss_pred HHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCC-ceeeCHHHHHHHHhh-----CCeEEEEEeCCCC
Confidence 10 01237899999999999999999999999998863 357899999999987 7889889999999
Q ss_pred CCCCCCHHHHHHHHHHHHHC------CcEEEEcccCCcccc--cCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 171 TGQVLTKENIQDIIKFAHRE------KLFLFADEVYQDNVY--AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~------~i~lI~Deay~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
||.+.| +++|+++|+++ |+++++|.+|+.+.. .-+ +. . .++. ....+.+++ |.+|...|
T Consensus 199 tG~idp---i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~-~~-~-----~~~~--~~~~DSis~-s~HK~~~~ 265 (431)
T TIGR01788 199 TGEYED---VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYP-DL-E-----WDFR--LPRVKSINV-SGHKYGLV 265 (431)
T ss_pred CcccCC---HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCC-Cc-h-----hhcC--CCCceEEEE-CchhccCC
Confidence 999977 89999999999 999999999996542 001 00 0 0111 113457777 88997534
Q ss_pred CCCCeeEEEeeecCCHH-HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccC
Q psy13922 243 ECGLRGGYSEVINLDPG-VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVN 321 (509)
Q Consensus 243 ~~Glr~G~v~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 321 (509)
..| +|.+.+ .+++ +.+.+.. ...+.+.... +.. ++++.+ +..++...+.
T Consensus 266 P~g--~G~l~~--r~~~~l~~~~~~-~~~yl~~~~~----------~~t------------~~~sR~---g~~al~~w~~ 315 (431)
T TIGR01788 266 YPG--VGWVIW--RDEEALPEELIF-HVNYLGGDEP----------TFT------------LNFSRP---ANQVIAQYYN 315 (431)
T ss_pred CCC--cEEEEE--eChHHcchhhee-cccccCCCCC----------Ccc------------eecCch---HHHHHHHHHH
Confidence 555 566653 5543 2233211 0011111000 000 000000 0000000000
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC--CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHH
Q psy13922 322 PPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPV--QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAF 399 (509)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 399 (509)
- ...-...++++.+...++.+++.+.|++.|+++++.+ ..+...| ++.-.. ..++ +..+ +.
T Consensus 316 l-------~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~F-r~~~~~-------~~~~-~~~~-l~ 378 (431)
T TIGR01788 316 F-------LRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAF-KLKDDA-------DPGY-TLYD-LS 378 (431)
T ss_pred H-------HHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEE-EeCCCC-------CCCc-CHHH-HH
Confidence 0 0000123677888888999999999999988988754 4444443 332100 0011 1223 45
Q ss_pred HHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeE
Q psy13922 400 ELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHF 479 (509)
Q Consensus 400 ~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (509)
+.|.+.|+.+..-..... ..|..++
T Consensus 379 ~~L~~~G~~~~~~~~p~~-------------------------------------------------------~~~~~~l 403 (431)
T TIGR01788 379 HRLRERGWIVPAYTLPKN-------------------------------------------------------AEDIVVM 403 (431)
T ss_pred HHHHHCCCcccCCCCCCc-------------------------------------------------------cCCeEEE
Confidence 677788986542111110 1233389
Q ss_pred EEEee--cChHHHHHHHHHHHHHHHHH
Q psy13922 480 RTTIL--PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 480 Rls~~--~~~~~i~~~~~~l~~~~~~~ 504 (509)
|+++. .+.+.+++.++.|++++.++
T Consensus 404 R~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 404 RIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred EEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 99986 67889999999999888653
No 270
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=1.6e-14 Score=148.48 Aligned_cols=167 Identities=13% Similarity=0.159 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----HhcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL----AEFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~~~g~~~~~v 131 (509)
..|.+.++++. ..+..+++++++.|+..++.+++++|| +|+++...|.+....+ +..|+++..+
T Consensus 65 ~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD----~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~v 132 (395)
T PRK08114 65 FSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGD----HVLMTGTAYEPTQDFCSKILSKLGVTTTWF 132 (395)
T ss_pred HHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCC----EEEEeCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence 56777777765 246788888899999999999999998 9999999998776554 6679999887
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC--CcEEEEcccCCcccccCCC
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE--KLFLFADEVYQDNVYAEGS 209 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~--~i~lI~Deay~~~~~~~~~ 209 (509)
+. .|.+.++++++. ++++|++.+|+||+|.+.+ +++|+++|+++ |+++|+|.++.....
T Consensus 133 d~-------~d~~~l~~~l~~-----~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~---- 193 (395)
T PRK08114 133 DP-------LIGADIAKLIQP-----NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL---- 193 (395)
T ss_pred CC-------CCHHHHHHhcCC-----CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc----
Confidence 63 267889999887 7999999999999999987 99999999998 499999999975221
Q ss_pred ccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhh
Q psy13922 210 KFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSI 268 (509)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~ 268 (509)
..+..+ +. -++++|.+|.++|.+.+-+|.++ .++++.+.+....
T Consensus 194 --~~pl~~----Ga------Divv~S~tKyl~Ghsdv~~G~v~---~~~~~~~~l~~~~ 237 (395)
T PRK08114 194 --FKALDF----GI------DISIQAGTKYLVGHSDAMIGTAV---ANARCWEQLRENS 237 (395)
T ss_pred --cCHHHc----CC------cEEEEcCcccccCCCcceeEEEE---cCHHHHHHHHHHH
Confidence 122222 11 35577999999787667888665 6777766665443
No 271
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.71 E-value=8.4e-15 Score=154.22 Aligned_cols=214 Identities=13% Similarity=0.071 Sum_probs=134.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCC-CC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK-KP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~-~~ 105 (509)
+|.|.+++.+++.... ...+|-.. +.+..+++.+.+... -..+.++++++++||+..+++..+.....+ +.
T Consensus 100 ~p~v~~Ai~~ql~~l~--~~~~~~~~----~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~ 171 (459)
T PRK11522 100 NPVVVSAVQNQLAKQP--LHSQELLD----PLRAMLAKTLAALTP--GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKF 171 (459)
T ss_pred CHHHHHHHHHHHhhCc--ccccccCC----HHHHHHHHHHHHhCC--CCCCEEEEeCCchHHHHHHHHHHHHHhccCCCc
Confidence 6899999999998732 12223222 344445554443322 123589999999999999999876432111 34
Q ss_pred eEEEcCCCChhHHHHHHhc-CCEEEE---EecCCCCC-C-CCCHHHHHHHHHhhhc-cCCceEEEEeCCCCCCCC-CCCH
Q psy13922 106 GVLIPIPQYPLYSASLAEF-NMEQIG---YYLDESKQ-W-GLPISELERSITEARK-HCNPRAIVIINPGNPTGQ-VLTK 177 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~-g~~~~~---v~~~~~~~-~-~~d~~~L~~~i~~~~~-~~~~~~ivi~~p~NPtG~-~~s~ 177 (509)
.|+.....|++........ +..... .|..+.-. . ..|.+.+++.++.... ..++.+|++.....-.|. ..|+
T Consensus 172 ~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~ 251 (459)
T PRK11522 172 TFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPE 251 (459)
T ss_pred EEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCH
Confidence 7888899999876544332 211111 11111100 0 1267888888864211 125678888766666777 5678
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-CeeEEEeeecC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG-LRGGYSEVINL 256 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G-lr~G~v~~~~~ 256 (509)
+.++++.++|++||+++|.||++..|...|. ...... .++.++ ++ +++|.+ | .| +++|.++ .
T Consensus 252 ~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~--~~a~e~--~gv~PD-----iv---t~gK~l-g-gG~~Pigav~---~ 314 (459)
T PRK11522 252 GYLTAVRKLCDEFGALLILDEVQTGMGRTGK--MFACEH--ENVQPD-----IL---CLAKAL-G-GGVMPIGATI---A 314 (459)
T ss_pred HHHHHHHHHHHHcCCEEEeccceecCCccch--hhhhhc--cCCCCC-----EE---Eechhh-h-CCCccceeEE---E
Confidence 8999999999999999999999988755432 212111 122222 33 779999 5 78 6999998 6
Q ss_pred CHHHHHHHH
Q psy13922 257 DPGVKAMLH 265 (509)
Q Consensus 257 ~~~~~~~l~ 265 (509)
.+++++.+.
T Consensus 315 ~~~i~~~~~ 323 (459)
T PRK11522 315 TEEVFSVLF 323 (459)
T ss_pred cHHHHHHhc
Confidence 788888764
No 272
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=1.2e-14 Score=151.98 Aligned_cols=154 Identities=19% Similarity=0.213 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----HhcCCEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL----AEFNMEQIG 130 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~~~g~~~~~ 130 (509)
..++++.+|++++ .+..++|+++++|+++++.++.++|| +|+++...|.+....+ ...|++++.
T Consensus 66 ~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~Gd----~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~ 133 (433)
T PRK08134 66 VAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAGS----HIVASSALYGGSHNLLHYTLRRFGIETTF 133 (433)
T ss_pred HHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCC----EEEEeCCccHHHHHHHHHHHhhCCeEEEE
Confidence 4778889998873 23478899999999999999998988 9999999998765443 557999998
Q ss_pred EecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCc
Q psy13922 131 YYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSK 210 (509)
Q Consensus 131 v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~ 210 (509)
++.+ |++++++++++ ++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|.++.....
T Consensus 134 vd~~-------d~~~l~~~i~~-----~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~----- 193 (433)
T PRK08134 134 VKPG-------DIDGWRAAIRP-----NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL----- 193 (433)
T ss_pred ECCC-------CHHHHHHhcCC-----CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 8753 78999999987 8999999999999999988 89999999999999999999865321
Q ss_pred cccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 211 FYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
..++ . .+ . -++++|.+|.+ |-+|-.+|.++
T Consensus 194 ~~pl-~----~G-----a-D~vv~S~tK~l-~g~g~~~gG~v 223 (433)
T PRK08134 194 LRPF-E----HG-----A-DLVYHSATKFL-GGHGTAIGGVL 223 (433)
T ss_pred CCch-h----cC-----C-CEEEecccccc-CCCCCceEEEE
Confidence 1121 1 11 1 24466999999 45777677765
No 273
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.70 E-value=4.2e-15 Score=156.33 Aligned_cols=214 Identities=13% Similarity=0.091 Sum_probs=132.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+....... +.. .+...++++.+.+..... ..+.|++++++++|+..+++..+.-.. +..
T Consensus 60 ~p~v~~Ai~~ql~~~~~~~~~-~~~----~~~~~~lae~L~~~~p~~-~~~~v~f~~SGseA~e~AiklAr~~tg--r~~ 131 (445)
T PRK08593 60 PPRVVEAIKAQADKFIHYTPA-YMY----HEPLVRLAKKLCELAPGD-FEKRVTFGLSGSDANDGIIKFARAYTG--RPY 131 (445)
T ss_pred CHHHHHHHHHHHHhccCcccc-ccC----CHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHHHHHHHHHHhhC--CCe
Confidence 689999999999872211111 112 233444454444332211 125899999999999999998654322 347
Q ss_pred EEEcCCCChhHHHHHHhc-CC-------------EEEEEecCCCC--CCC-CC-------HHHHHHHHHhhhccCCceEE
Q psy13922 107 VLIPIPQYPLYSASLAEF-NM-------------EQIGYYLDESK--QWG-LP-------ISELERSITEARKHCNPRAI 162 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~--~~~-~d-------~~~L~~~i~~~~~~~~~~~i 162 (509)
|+...-.|++....+... +. .+..+|..+.. .+. .+ ++.+++.+.......++.+|
T Consensus 132 ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAav 211 (445)
T PRK08593 132 IISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACI 211 (445)
T ss_pred EEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEE
Confidence 888898999875443221 10 12223322110 000 11 13344444321111268888
Q ss_pred EEeCCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 163 VIINPGNPTGQV-LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 163 vi~~p~NPtG~~-~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
++....+..|.. .+++.+++|.++|++||+++|.||++..|...+. ......+ .+.++ +.+++|.+
T Consensus 212 I~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~--~~a~~~~--gv~pD--------i~t~gK~l- 278 (445)
T PRK08593 212 VIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGK--WSSISHF--NITPD--------LMSFGKSL- 278 (445)
T ss_pred EEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch--HHHHHhc--CCCCC--------Eeeecccc-
Confidence 887777777875 7899999999999999999999999998865431 2111111 22221 33779999
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
| .|+++|+++ .++++++.+.
T Consensus 279 ~-~G~p~gav~---~~~~i~~~~~ 298 (445)
T PRK08593 279 A-GGMPMSAIV---GRKEIMESLE 298 (445)
T ss_pred c-CCcccEEEE---EcHHHHhhhc
Confidence 5 789999998 7899988875
No 274
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.70 E-value=5.5e-14 Score=146.02 Aligned_cols=191 Identities=12% Similarity=0.084 Sum_probs=131.8
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHH-HHHHHHHHHhhc---CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGAS-DGIKSVLKLLIE---DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIG 130 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~-~al~~~~~~l~~---~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~ 130 (509)
...+.+.+.+.+.+..|.+ ..+..++++|+| .++.+++.++.. +++ .|+++.-+|.+...++...|++++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd----~VI~p~~th~S~~kAi~~~G~~pv~ 177 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAK----YVIWPRIDQKSCIKAISTAGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCC----EEEEECcChHHHHHHHHHcCCeEEE
Confidence 4556666666665555633 124688888888 588777777653 355 9999999999999999999999999
Q ss_pred Eec-CCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCC
Q psy13922 131 YYL-DESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGS 209 (509)
Q Consensus 131 v~~-~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~ 209 (509)
++. .++.+|.+|++.|+++|++.. ++..++++++|+ |+.....+++++|+++|++||+++|+|++|+....
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~~~--~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~---- 249 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEEIG--PDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN---- 249 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHhcc--CCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh----
Confidence 995 234578999999999998521 134566666665 55555568899999999999999999999985221
Q ss_pred ccccHHHHHH-HhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhh
Q psy13922 210 KFYSFKKVLV-EMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSI 268 (509)
Q Consensus 210 ~~~~~~~~~~-~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~ 268 (509)
....+.. .... ....++ +.|++|.+ .+||. |+++ ++.++++++.+....
T Consensus 250 ---~~~~~~~~g~~~--Grad~v-v~s~hK~l-~~pg~--Gg~I-~~~d~el~~~i~~~y 299 (444)
T TIGR03531 250 ---KYMELINKAIKV--GRVDAV-VSSTDKNF-MVPVG--GAII-YSFDENFIQEISKSY 299 (444)
T ss_pred ---hhhhhhhccccc--cCCCeE-EEeCccCC-CCCCC--EEEE-EECCHHHHHHHHHhc
Confidence 1111110 0000 011244 55999999 47776 4443 237899998887643
No 275
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=2.1e-14 Score=150.06 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----HHhcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----LAEFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~~~~g~~~~~v 131 (509)
..|++.++++++ .+..+++++++.|+..++.++.++|| +|+++...|.+.... +...|++++.+
T Consensus 72 ~~Le~~lA~l~g--------~~~av~~sSG~aAi~~al~all~~Gd----~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~v 139 (436)
T PRK07812 72 DVVEQRIAALEG--------GVAALLLASGQAAETFAILNLAGAGD----HIVSSPRLYGGTYNLFHYTLPKLGIEVSFV 139 (436)
T ss_pred HHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCC----EEEEeCCcchHHHHHHHHHhhcCeEEEEEE
Confidence 577888887763 34578888888999999999999998 999999888876543 44578888887
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
+ +. .|++.+++++++ ++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|+++..... .
T Consensus 140 d-d~-----~d~e~l~~ai~~-----~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~-----~ 200 (436)
T PRK07812 140 E-DP-----DDLDAWRAAVRP-----NTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL-----I 200 (436)
T ss_pred C-CC-----CCHHHHHHhCCC-----CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 5 22 288999988876 7999999999999999988 89999999999999999998864211 1
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
.++ . . +.+++ +.|++|.++ -.|--+|++++
T Consensus 201 ~pl-~----~-----GaDiv-v~S~tK~lg-g~G~~i~G~vv 230 (436)
T PRK07812 201 RPL-E----H-----GADIV-VHSATKYLG-GHGTAIAGVIV 230 (436)
T ss_pred Cch-h----c-----CCCEE-EEecccccC-CCCCeEEEEEE
Confidence 111 1 1 12244 579999994 45655666663
No 276
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=1.1e-14 Score=153.96 Aligned_cols=332 Identities=13% Similarity=0.093 Sum_probs=200.1
Q ss_pred CCCCCCHHHHHHHHHHHhccc--CCCccc-CCCCcchHH----HHHHHHHHHhhhcCCCCCCCcEEEe---CCHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCR--GQSVGS-YTDSPGIEI----IRRHVAQYISRRDGQPADWQDVILS---AGASDGIKS 91 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~--~~~~~~-Y~~~~g~~~----lr~~va~~l~~~~g~~~~~~~i~~t---~G~~~al~~ 91 (509)
..+.+++.+++++...+...- +..... |........ .|+.+++++ | .+++++.++ +|++++...
T Consensus 42 sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf----~--a~~~~~~~~~~~~sgt~an~~ 115 (452)
T PTZ00094 42 SENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF----G--LDPEEWGVNVQPYSGSPANFA 115 (452)
T ss_pred ccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCcccceeecCCCchHHHHHH
Confidence 677789999999988887521 111112 222221222 344566666 4 456677676 788999999
Q ss_pred HHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh----------cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceE
Q psy13922 92 VLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE----------FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRA 161 (509)
Q Consensus 92 ~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~----------~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ 161 (509)
++.++.++|| +|++....|.++...... .+.++..++.+.+ ..+|++.|++.++.. ++++
T Consensus 116 v~~al~~~gd----~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~--g~id~~~L~~~l~~~----~~~l 185 (452)
T PTZ00094 116 VYTALLQPHD----RIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEK--GLIDYDKLEELAKAF----RPKL 185 (452)
T ss_pred HHHHhcCCCC----EEEecccccCCcccccccccccccccceeeeeeeecccCCC--CCcCHHHHHHHHHHh----CCCE
Confidence 9999998888 999987777665433211 1234445555543 478999999999764 6777
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 162 IVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 162 ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
+++. ++.+|...+ +++|.++|+++|+++++|++++......+....++. +.+++ +.|.+|++.
T Consensus 186 vi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----------~~D~l-~~S~hK~l~ 248 (452)
T PTZ00094 186 IIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----------YADVV-TTTTHKSLR 248 (452)
T ss_pred EEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----------CCcEE-EcCCccCCC
Confidence 7664 334888887 888888999999999999999875543221111110 12344 569999873
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHHhhhccc------CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccch
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHKSISAML------CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTV 315 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 315 (509)
| -+.|++.+ ++++.+.+........ +++.. ..++
T Consensus 249 G---P~Gg~l~~---~~~~~~~l~~~~~~~~~p~~~G~~~~~----------------------------------~iaa 288 (452)
T PTZ00094 249 G---PRSGLIFY---RKKVKPDIENKINEAVFPGLQGGPHNH----------------------------------QIAA 288 (452)
T ss_pred C---CCceEEEE---ecccchHHHHhhccccCCCCCCCchHH----------------------------------HHHH
Confidence 3 33477663 4444443332111000 11111 2333
Q ss_pred hhcccCCCCCCCCchHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCc-eeEEeecCCCCHHHHHHHhhcCCCC
Q psy13922 316 MDCVVNPPQPGEPSYEQF-SREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQG-AMYAFPQMKLPAKAIAKAKAEGKCP 393 (509)
Q Consensus 316 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~ 393 (509)
+..+++ .. ....+...+.+.++.+++.+.|.+. |+.+..+.. .-...+.+..+ ++.
T Consensus 289 l~~al~----------~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~----------~~~- 346 (452)
T PTZ00094 289 IAVQLK----------EVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPF----------GIT- 346 (452)
T ss_pred HHHHHH----------HHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcC----------CCC-
Confidence 333322 11 1124567788889999999999886 877653211 22234344321 221
Q ss_pred cHHHHHHHHhhcCeEE-ecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCC
Q psy13922 394 SVLYAFELLERTGICI-VPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQ 472 (509)
Q Consensus 394 ~~~~~~~ll~~~gI~v-~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (509)
.. .+...|+++||.+ +++..+... .+ .++
T Consensus 347 ~~-~~~~~L~~~gI~vs~~~~p~~~~-------------------------------~~-------------~~~----- 376 (452)
T PTZ00094 347 GS-KMEKLLDAVNISVNKNTIPGDKS-------------------------------AL-------------NPS----- 376 (452)
T ss_pred HH-HHHHHHHHCCcEEecccCCCCCc-------------------------------CC-------------CCC-----
Confidence 22 2567788899999 444433220 00 012
Q ss_pred CCCceeEEEEee--c----ChHHHHHHHHHHHHHHHH
Q psy13922 473 VPGTYHFRTTIL--P----QPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 473 ~~~~~~~Rls~~--~----~~~~i~~~~~~l~~~~~~ 503 (509)
.+|+|+. + ++++++..++.|.+++..
T Consensus 377 -----~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 377 -----GVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred -----eEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 7999985 3 489999999999988874
No 277
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.69 E-value=2.1e-14 Score=150.29 Aligned_cols=214 Identities=13% Similarity=0.079 Sum_probs=134.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC-CCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD-GKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd-~~~~ 105 (509)
+|.|.+++.+++.... ...+|-... .+..+|+.+.+.... ..+.++++++++||++.+++..+.... ..+.
T Consensus 93 hp~v~~Av~~ql~~l~--~~~~~~~~~----~~~~lAe~L~~~~p~--~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~ 164 (442)
T TIGR03372 93 NPNVIAAVENQLAKQP--LHSQELLDP----LRALLAKTLAALTPG--KLKYSFFCNSGTESVEAALKLAKAYQSPRGKF 164 (442)
T ss_pred CHHHHHHHHHHHHhCC--CcccccCCH----HHHHHHHHHHHhCCC--CcCEEEEeCCchHHHHHHHHHHHHHHhhcCCc
Confidence 6889999999998732 222233333 334444444333221 125799999999999999998765310 0134
Q ss_pred eEEEcCCCChhHHHHHHhcCCE-EE---EEecCCCCC--CCCCHHHHHHHHHhhhc-cCCceEEEEeCCCCCCCC-CCCH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNME-QI---GYYLDESKQ--WGLPISELERSITEARK-HCNPRAIVIINPGNPTGQ-VLTK 177 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~-~~---~v~~~~~~~--~~~d~~~L~~~i~~~~~-~~~~~~ivi~~p~NPtG~-~~s~ 177 (509)
.|+.....|++........... .. ..|..+.-. -..|.+.+++.++.... ..++.+|++.......|. ..++
T Consensus 165 ~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~ 244 (442)
T TIGR03372 165 TFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPE 244 (442)
T ss_pred EEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCH
Confidence 7999999999876544433211 00 011111000 01267788777754211 126788888766666776 5578
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-CeeEEEeeecC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG-LRGGYSEVINL 256 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G-lr~G~v~~~~~ 256 (509)
+.++++.++|++||+++|.||++..|...| ........ ++.++ ++ +++|.+ | .| +++|.++ .
T Consensus 245 ~yl~~l~~lc~~~g~llI~DEV~tG~GRtG--~~~a~e~~--gv~PD-----iv---t~gK~l-g-~G~~Pigavv---~ 307 (442)
T TIGR03372 245 GYLPAVRALCDEFGALLILDEVQTGMGRTG--KMFACEHE--GVQPD-----IL---CLAKAL-G-GGVMPIGATI---A 307 (442)
T ss_pred HHHHHHHHHHHHcCCEEEEeecccCCCccc--cchhhhhc--CCCCC-----ee---eehhhh-c-CCcccceEEE---e
Confidence 999999999999999999999998876554 22222221 22222 33 579999 5 78 6999988 6
Q ss_pred CHHHHHHHH
Q psy13922 257 DPGVKAMLH 265 (509)
Q Consensus 257 ~~~~~~~l~ 265 (509)
++++.+.+.
T Consensus 308 ~~~i~~~~~ 316 (442)
T TIGR03372 308 TEAVFSVLF 316 (442)
T ss_pred cHHHHHhhh
Confidence 888888874
No 278
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.68 E-value=1.8e-14 Score=146.89 Aligned_cols=332 Identities=14% Similarity=0.126 Sum_probs=203.6
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchH---HHHHHHHHHHhhhcCCCCCCCcEEEeCC-HHHHHHHHHHHhhcCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIE---IIRRHVAQYISRRDGQPADWQDVILSAG-ASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~---~lr~~va~~l~~~~g~~~~~~~i~~t~G-~~~al~~~~~~l~~~gd 101 (509)
.|..|++++.+.+........+.|....-.+ ++.+.+.+.+...++.+ +..+|++++| +|++++.++..+..+++
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 6889999999999964423333343333223 45555555555555531 2346888866 99999999999998887
Q ss_pred CCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCC--CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 102 GKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQW--GLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~--~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
++++..-...+ +.+.++..|. +..+..++...| .+|++.++. ++ ++++|.+++..+.||+..+
T Consensus 82 ----~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~v~~th~ETstGv~~~- 148 (349)
T TIGR01364 82 ----VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--SE-----DAAYVHYCANETIHGVEFR- 148 (349)
T ss_pred ----eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--CC-----CCCEEEEcCCCCcccEecc-
Confidence 77666554444 5677888898 776665433223 355565542 22 7899999999999999865
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
++++.+++++++|.+.+.... ...+..+ + +++.|..|.+ |++| +|.+. .+
T Consensus 149 -------~l~~~~~~l~iVDavss~g~~-----~id~~~~-----------d-~~~~ssqK~l-gP~G--lg~l~---~s 198 (349)
T TIGR01364 149 -------ELPDVKNAPLVADMSSNILSR-----PIDVSKF-----------G-LIYAGAQKNI-GPAG--LTVVI---VR 198 (349)
T ss_pred -------eecccCCCeEEEEccccccCc-----cCCHHHc-----------c-EEEEeccccc-CCCc--eEEEE---EC
Confidence 556678999999999876332 2333321 1 4455779999 8888 46665 47
Q ss_pred HHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 258 PGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 258 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++.++++.... ++.. + | .......-..+++...+..++..+++ |-.-...+
T Consensus 199 ~~~~~~~~~~~-----~~~~------~------~----~~~~~~~~~~~Tp~~~~i~al~~al~--------~l~~~gG~ 249 (349)
T TIGR01364 199 KDLLGRASRIT-----PSML------N------Y----KIHAENDSMYNTPPTFAIYVSGLVFK--------WLKEQGGV 249 (349)
T ss_pred HHHHhhcccCC-----CCcc------h------H----HHHHhcCCCCCCCcHHHHHHHHHHHH--------HHHHcCCH
Confidence 77777664310 0000 0 0 00000000012333335556665544 11111027
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeecc--C--CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNP--V--QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
+.+.++.+++.+++.+.|++++|+.... + ..+..+.+.++ . .....+ ....+.++||.+.+|.
T Consensus 250 e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~--~----------~~~~~~-~~~~~~~~Gi~~~~~~ 316 (349)
T TIGR01364 250 KAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLG--N----------EELEKR-FLKEAEERGLVSLKGH 316 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecC--C----------hhHhHH-HHHHHHHCCCcccCCc
Confidence 8889999999999999999997764332 1 23233333332 1 101122 2346677899776654
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHH
Q psy13922 414 GFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLK 491 (509)
Q Consensus 414 ~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~ 491 (509)
. . .+ .||+|+. ++.++|+
T Consensus 317 ~--~------------------------------------------------~g----------~vRvS~~~~nt~edid 336 (349)
T TIGR01364 317 R--S------------------------------------------------VG----------GMRASIYNAMPLEGVQ 336 (349)
T ss_pred c--c------------------------------------------------cC----------eeEEECcCCCCHHHHH
Confidence 2 1 22 7999988 7899999
Q ss_pred HHHHHHHHHHHH
Q psy13922 492 AMLEKFREFHEE 503 (509)
Q Consensus 492 ~~~~~l~~~~~~ 503 (509)
.+++.|+++.++
T Consensus 337 ~l~~al~~~~~~ 348 (349)
T TIGR01364 337 ALVDFMKEFQKK 348 (349)
T ss_pred HHHHHHHHHHHh
Confidence 999999887653
No 279
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.68 E-value=2.5e-14 Score=152.09 Aligned_cols=215 Identities=13% Similarity=0.066 Sum_probs=132.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+.. +. .+...+..+....+++.+.+... +...+.+++++++++|...+++..+.- |..
T Consensus 107 hp~v~~Av~~ql~~~~---~~-~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~ 181 (504)
T PLN02760 107 EPRLVAAATEQLNKLP---FY-HSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRP 181 (504)
T ss_pred CHHHHHHHHHHHhhcc---ce-ecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCC
Confidence 6899999999998722 11 01011223445555655543321 112357999999999999999988521 222
Q ss_pred CCCeEEEcCCCChhHHHHHHh-cCCE------------EEEEecCCCCCCCC-------------CHHHHHHHHHhhhcc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAE-FNME------------QIGYYLDESKQWGL-------------PISELERSITEARKH 156 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~~~~~-------------d~~~L~~~i~~~~~~ 156 (509)
.+..||...-.|++....... .|.. +..++... .|.. ..+.|++.+.... .
T Consensus 182 ~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-~ 258 (504)
T PLN02760 182 NKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH--YWRFHLPGETEEEFSTRLADNLENLILKEG-P 258 (504)
T ss_pred CCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCc--ccccCCCCCcHHHHHHHHHHHHHHHHHhcC-C
Confidence 245899999899987543322 2221 11111110 0110 1244666664321 1
Q ss_pred CCceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEe
Q psy13922 157 CNPRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMS 235 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 235 (509)
.++.+|++.....-.|. ..+++.+++|.++|++||+++|.||++..|...|. ...... .++.++ +.+
T Consensus 259 ~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~--~~a~e~--~gv~PD--------ivt 326 (504)
T PLN02760 259 ETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT--MFGCDK--YNIKPD--------LVS 326 (504)
T ss_pred CceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch--hhHHHh--cCCCCc--------EEE
Confidence 25778887656666676 56789999999999999999999999998866542 222211 122222 447
Q ss_pred cccccCCCCC-CeeEEEeeecCCHHHHHHHHH
Q psy13922 236 CSKGYMGECG-LRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 236 ~SK~~~G~~G-lr~G~v~~~~~~~~~~~~l~~ 266 (509)
++|.+ | .| +++|.++ .++++++.+..
T Consensus 327 lgK~l-g-gG~~PigAv~---~~~~i~d~~~~ 353 (504)
T PLN02760 327 LAKAL-S-SAYMPIGAVL---VSPEISDVIHS 353 (504)
T ss_pred ecccc-c-CCccccceEe---ecHHHHhhhhc
Confidence 79999 4 66 5999987 78999998863
No 280
>PRK02769 histidine decarboxylase; Provisional
Probab=99.68 E-value=5.5e-14 Score=144.56 Aligned_cols=302 Identities=11% Similarity=0.023 Sum_probs=181.5
Q ss_pred HHHHHHHhhc-CCC-CCCCCC---CCHHHHHHHHHHHhcccCCC--cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCc-
Q psy13922 7 LSLQVLALVS-LPQ-LFDDPR---FPDDVKQRAQAVLDGCRGQS--VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQD- 78 (509)
Q Consensus 7 ~~~~~~~~~~-~~~-~~~~~~---~p~~v~~a~~~~l~~~~~~~--~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~- 78 (509)
.++++...+. .|. .++.|. ++...++.+........+.+ ...|+. ...++.+.+.+++.+.+|. ++++
T Consensus 10 ~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~~~~~g~--~~~~~e~~~~~~~a~l~g~--~~~~~ 85 (380)
T PRK02769 10 EIEDFWLYLRHNQYFNVGYPEAADFDYSALKRFFSFSINNCGDPYSKSNYPL--NSFDFERDVMNFFAELFKI--PFNES 85 (380)
T ss_pred HHHHHHHHHHHhhhcccCCCchhhcCHHHHHHHHHhhhccCCCccccCCCCC--ChHHHHHHHHHHHHHHhCC--CCCCC
Confidence 3444554443 333 334333 44455555555554422222 222222 2355666666666665563 3444
Q ss_pred -EEEeCCHHHHHHHHHHHhh--cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 -VILSAGASDGIKSVLKLLI--EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 -i~~t~G~~~al~~~~~~l~--~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
.++|+|+||++...+...+ .+++ .|+++.-.|.+....++.+|.+...++.+++ +.+|++.|++.+++.
T Consensus 86 ~G~~TsGgTean~~a~~~ar~~~~~~----~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~--g~id~~~L~~~i~~~-- 157 (380)
T PRK02769 86 WGYITNGGTEGNLYGCYLARELFPDG----TLYYSKDTHYSVSKIARLLRIKSRVITSLPN--GEIDYDDLISKIKEN-- 157 (380)
T ss_pred CEEEecChHHHHHHHHHHHHHhCCCc----EEEeCCCceehHHHHHHHcCCCCceeccCCC--CcCcHHHHHHHHHhC--
Confidence 4889999999876665543 3444 8999999999999999999999888888754 479999999999873
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC---cEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEE
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREK---LFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELAS 232 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~---i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ 232 (509)
..++.+|+++.++|++|.+-+ +++|+++|+++| +++++|.+|+.+...-...... .++ .. ..+.++
T Consensus 158 ~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~-~d~------~~-~vDsis 226 (380)
T PRK02769 158 KNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP-FSF------AD-GIDSIA 226 (380)
T ss_pred CCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCcccc-CCc------cC-CCCEEE
Confidence 114888889999999999977 899999999998 6999999998855321000000 000 00 234776
Q ss_pred EEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccc
Q psy13922 233 FMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVG 312 (509)
Q Consensus 233 i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (509)
+ |.+|.+ | .-..+|++++ .++..+.+... ..+.... |.. + .|.+....
T Consensus 227 ~-s~HK~~-~-~P~g~G~l~~---r~~~~~~~~~~-~~yl~~~------------d~t------------~-~GSR~g~~ 274 (380)
T PRK02769 227 I-SGHKFI-G-SPMPCGIVLA---KKKYVERISVD-VDYIGSR------------DQT------------I-SGSRNGHT 274 (380)
T ss_pred E-CCcccC-C-CCCCcEEEEE---ehhhhhhcccC-ccccCCC------------CCC------------c-cCCCCcHH
Confidence 6 889998 5 2345777763 44454444210 0110000 000 1 11111112
Q ss_pred cchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec-cCCceeEEe
Q psy13922 313 QTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN-PVQGAMYAF 373 (509)
Q Consensus 313 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~g~~~~ 373 (509)
..++-..+. +- -...+++..+...++.+++.+.|++. |++.. .|.....++
T Consensus 275 ~l~lw~aL~--------~l-g~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f 326 (380)
T PRK02769 275 ALLLWAAIR--------SL-GSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVF 326 (380)
T ss_pred HHHHHHHHH--------HH-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEE
Confidence 222222222 11 11226778888999999999999887 87765 565555443
No 281
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.68 E-value=1.5e-14 Score=152.48 Aligned_cols=205 Identities=12% Similarity=0.084 Sum_probs=134.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+ .... ..+ .+....+++.+.+... ..+.+.++++++||...+++..+.-.. +++
T Consensus 117 ~p~v~~av~~ql~~---~~~~-~~~----~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA~e~AlklAR~~tg--r~~ 183 (474)
T PLN02482 117 DDEVLAALAETMKK---GTSF-GAP----CLLENVLAEMVIDAVP---SVEMVRFVNSGTEACMGVLRLARAYTG--REK 183 (474)
T ss_pred CHHHHHHHHHHHhh---CCCC-CCC----CHHHHHHHHHHHHhCC---CCCEEEEeCChHHHHHHHHHHHHHhcC--CCE
Confidence 58999999999987 2222 112 2345556666654432 247899999999999999998865432 458
Q ss_pred EEEcCCCChhHHHHHHhc---CCEEEEEecCC--------C---CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 107 VLIPIPQYPLYSASLAEF---NMEQIGYYLDE--------S---KQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~--------~---~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
|+...-+|+++...+... +......+..+ + ..| -|++.+++.++... .++.+|++.......|
T Consensus 184 Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~--~~iAavI~Epv~g~~G 260 (474)
T PLN02482 184 IIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANK--GEIAAVILEPVVGNSG 260 (474)
T ss_pred EEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCC--CceEEEEECCCCCCCC
Confidence 999999999975332110 10000000000 0 001 17889998887421 2577887765556667
Q ss_pred CC-CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 173 QV-LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 173 ~~-~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
.+ .+++++++|.++|++||+++|+||++..| ..+. . ...+. .++.++ + .+++|.+ | .|+++|.+
T Consensus 261 ~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~--~-ga~~~-~gv~PD-----i---~t~gK~l-g-gG~Pigav 325 (474)
T PLN02482 261 FIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAY--G-GAQEY-FGITPD-----L---TTLGKVI-G-GGLPVGAY 325 (474)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCc--c-hHhHH-hCCCCC-----E---EEecchh-h-CCCceEEE
Confidence 64 45899999999999999999999999887 4321 1 11111 122222 3 4779999 5 89999999
Q ss_pred eeecCCHHHHHHHH
Q psy13922 252 EVINLDPGVKAMLH 265 (509)
Q Consensus 252 ~~~~~~~~~~~~l~ 265 (509)
+ +++++++.+.
T Consensus 326 ~---g~~ei~~~~~ 336 (474)
T PLN02482 326 G---GRREIMEMVA 336 (474)
T ss_pred E---EcHHHHHhhc
Confidence 7 7999999885
No 282
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=3.7e-14 Score=147.55 Aligned_cols=307 Identities=13% Similarity=0.049 Sum_probs=186.4
Q ss_pred CCCCCCHHHHHHHHHHHhccc--CCCc-ccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCR--GQSV-GSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~--~~~~-~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
..+..++.+++++-..+...- +... .-|+......++.....+...+.+| .+..||-.-+|+ .|...++.++++
T Consensus 57 sEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~--a~~anvqp~Sg~-~An~~v~~all~ 133 (493)
T PRK13580 57 SENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG--AEHAYVQPHSGA-DANLVAFWAILA 133 (493)
T ss_pred ccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC--CCcccccCCCcH-HHHHHHHHHHhc
Confidence 556668888888776666521 1111 1245555555666666666666665 334567766776 577788888887
Q ss_pred C-------------------------------CCCCCCeEEEcCCCChhHH-----HHHHhcCCEEEEEecCCCCCCCCC
Q psy13922 99 D-------------------------------VDGKKPGVLIPIPQYPLYS-----ASLAEFNMEQIGYYLDESKQWGLP 142 (509)
Q Consensus 99 ~-------------------------------gd~~~~~Vlv~~p~y~~~~-----~~~~~~g~~~~~v~~~~~~~~~~d 142 (509)
| || +|+...+...++. ..+.....+...++++++ ...+|
T Consensus 134 ~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd----~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~-~g~iD 208 (493)
T PRK13580 134 HKVESPALEKLGAKTVNDLTEEDWEALRAELGNQ----RLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD-TGLLD 208 (493)
T ss_pred ccccCcchhccccccccccchhhhhhhhccCCCC----EEEeecCCCCCeeecCcccchhhheeeeEecccCcc-cCccC
Confidence 6 55 8888766554331 222222366677777644 34799
Q ss_pred HHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhC
Q psy13922 143 ISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMG 222 (509)
Q Consensus 143 ~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~ 222 (509)
.+.+++.+.+ +++.|+++..+|-++ ..+ +++|.++|+++|+++++|++|......++. .. ....+ .
T Consensus 209 ~d~l~~~~~~-----~~plvii~g~S~~~~-~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~-~~--~~~~~-~- 274 (493)
T PRK13580 209 YDEIAALARE-----FKPLILVAGYSAYPR-RVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKV-FT--GDEDP-V- 274 (493)
T ss_pred HHHHHHHHhh-----cCCEEEEeCccccCC-CcC---HHHHHHHHHHcCCEEEEECchhhceecccc-ch--hhcCC-C-
Confidence 9999999988 677777777777644 555 899999999999999999999887665321 10 00000 0
Q ss_pred CCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHH
Q psy13922 223 EPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQA 301 (509)
Q Consensus 223 ~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (509)
.+.+ |+++|++|++. |-+.|+++ .++++++.+.+.... ++++.....++
T Consensus 275 ---~~~D-~vtgT~hKaL~---GP~GG~I~---~~~~l~~~L~~a~P~i~gg~l~p~iAA-------------------- 324 (493)
T PRK13580 275 ---PHAD-IVTTTTHKTLR---GPRGGLVL---AKKEYADAVDKGCPLVLGGPLPHVMAA-------------------- 324 (493)
T ss_pred ---CCCc-EEEeCChhhcc---CCCeEEEE---ecHHHHHHHhhCCCcccCCCccHHHHH--------------------
Confidence 1223 45679999873 44568887 688888888543321 22222220000
Q ss_pred hhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc--CCceeEEeecCCCC
Q psy13922 302 VLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP--VQGAMYAFPQMKLP 379 (509)
Q Consensus 302 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~~~g~~~~~~~~~~ 379 (509)
...++..+.. .+.+..++.+.++...|.+.|.+. |+.+.. .++ -.+++++.-.
T Consensus 325 ----------~avAl~e~~~-------------~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTds-hIV~V~lg~~ 379 (493)
T PRK13580 325 ----------KAVALAEART-------------PEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTDN-HLVLIDVTSF 379 (493)
T ss_pred ----------HHHHHHHHhC-------------ccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCCC-CEEEEEeCCH
Confidence 1111221111 012456788888999999999888 887652 333 3445555411
Q ss_pred HHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 380 AKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 380 ~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
. ..-..+.+.|.+.||.+.+-.....
T Consensus 380 ~------------~~g~~a~~~L~e~GI~vn~i~~Ptv 405 (493)
T PRK13580 380 G------------LTGRQAESALLDAGIVTNRNSIPSD 405 (493)
T ss_pred H------------HHHHHHHHHHHHCCeEEccccCCCC
Confidence 1 0112256788899999986554333
No 283
>PRK07678 aminotransferase; Validated
Probab=99.67 E-value=4.8e-14 Score=148.60 Aligned_cols=213 Identities=10% Similarity=0.055 Sum_probs=132.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+....... |. .+....+++.+.+..+ ..+.+++++++++|++.+++..+.- |.+
T Consensus 65 ~p~v~~ai~~q~~~~~~~~~~-~~-----~~~~~~lae~l~~~~~---~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~ 135 (451)
T PRK07678 65 RKELAEAAYEQLKTLSYFPLT-QS-----HEPAIKLAEKLNEWLG---GEYVIFFSNSGSEANETAFKIARQYHAQKGEP 135 (451)
T ss_pred CHHHHHHHHHHHHhcCccccc-cC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 688999999998873211111 22 2233445554443322 1247999999999999999887542 322
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCCCC--CCCC-----C---HHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDESK--QWGL-----P---ISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~--~~~~-----d---~~~L~~~i~~~~~~~~~ 159 (509)
.+..|+...-+|++....+... |. .+..++..... .|.. | ++.+++.++... ..++
T Consensus 136 ~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~i 214 (451)
T PRK07678 136 HRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWEL-SETI 214 (451)
T ss_pred CCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcC-CCce
Confidence 3458999999999876544322 11 11222211100 0100 1 233555665211 1268
Q ss_pred eEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 160 RAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 160 ~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
.+|++...+.-.|. ..+++.++++.++|++||+++|.||++..|...|. ...... .++.++ ++ +++|
T Consensus 215 AAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~~~~~--~gv~PD-----iv---t~gK 282 (451)
T PRK07678 215 AAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK--AFGFMN--YGVKPD-----II---TMAK 282 (451)
T ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch--hHHHHh--cCCCCC-----EE---Eeec
Confidence 88888655555665 57889999999999999999999999999866542 222222 222222 33 6699
Q ss_pred ccCCCCC-CeeEEEeeecCCHHHHHHHHH
Q psy13922 239 GYMGECG-LRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 239 ~~~G~~G-lr~G~v~~~~~~~~~~~~l~~ 266 (509)
.+ | .| +++|.++ .++++++.+..
T Consensus 283 ~l-g-gG~~Pi~av~---~~~~i~~~~~~ 306 (451)
T PRK07678 283 GI-T-SAYLPLSATA---VKKEIYEAFKG 306 (451)
T ss_pred cc-c-cCCcceeEEE---EcHHHHHHHhc
Confidence 99 4 67 7999998 78999988863
No 284
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.67 E-value=2.7e-14 Score=147.61 Aligned_cols=342 Identities=12% Similarity=0.051 Sum_probs=196.7
Q ss_pred CCCCCCHH-HHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeC-CHHHHHHHHHHHhhcC
Q psy13922 22 DDPRFPDD-VKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSA-GASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~p~~-v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~-G~~~al~~~~~~l~~~ 99 (509)
|+-.+|+. |++++.+.... ..+....-..-+.+.|+.+++++ +.+ ++++|++++ |+|.+++.++..+.++
T Consensus 19 Gp~~~~~~~v~~a~~~~~~~---~~hr~~~f~~~~~~~r~~l~~l~----~~~-~~~~v~~~~gs~T~~~~~~~~~l~~~ 90 (378)
T PRK03080 19 GPCKKRPGWQLEALADALLG---RSHRQKPVKALLKRVIEGTRELL----SLP-EGYEVGIVPGSDTGAWEMALWSLLGA 90 (378)
T ss_pred CCcCCChHHHHHHHHhhhcc---cCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEECCchHHHHHHHHHhcCCC
Confidence 45556777 99998754432 11110111233455666677666 421 345788875 8999999999999764
Q ss_pred CCCCCCeEEEcCCCChh-HHH-HHHhcCC-EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 100 VDGKKPGVLIPIPQYPL-YSA-SLAEFNM-EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~-~~~-~~~~~g~-~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
++ ..|++ .-.|.. +.. ..+..|. ++..++.+.. ..+|+++++ .++.|.+++..|.||..++
T Consensus 91 ~~---~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g--~~~d~~~i~----------~~~~V~~~h~~t~tG~~~p 154 (378)
T PRK03080 91 RR---VDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYG--SLPDLSAVD----------FDRDVVFTWNGTTTGVRVP 154 (378)
T ss_pred Cc---ceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCC--CCCCHhhcC----------CCCCEEEEecCCccceecc
Confidence 22 14444 445554 233 2366788 8888876533 255666532 2456788999999999998
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
+++|++ +++|+++|+|.+++.... ...+..+ +++ +.|..|.+.|.+| +|++. .
T Consensus 155 ---i~~I~~--~~~g~~~vVDa~qs~G~~-----pidv~~i-----------D~~-~~s~~K~l~~P~G--~g~l~---v 207 (378)
T PRK03080 155 ---VARWIG--ADREGLTICDATSAAFAL-----PLDWSKL-----------DVY-TFSWQKVLGGEGG--HGMAI---L 207 (378)
T ss_pred ---chhhcc--ccCCCeEEEecccccccC-----CCCHHHC-----------cEE-EEehhhhCCCCCc--eEEEE---E
Confidence 777777 789999999999877432 2333331 155 4477999854466 56665 4
Q ss_pred CHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCccc---ccchhhcccCCCCCCCCchHHH
Q psy13922 257 DPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSV---GQTVMDCVVNPPQPGEPSYEQF 333 (509)
Q Consensus 257 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~al~~~~~~~~~~~~~~~~~ 333 (509)
+++.++++......+..+..+ + +... .......++.+..... +..++..+++ ..
T Consensus 208 ~~~~~~~~~p~~~~~~~~~~~---------~---~~~~-~~~~~~~~~~~t~~tp~i~~i~~l~~al~----------~l 264 (378)
T PRK03080 208 SPRAVERLESYTPARPIPKFF---------R---LTKG-GKAIENSFKGQTINTPSMLTVEDYLDQLD----------WA 264 (378)
T ss_pred CHHHHHhhhcccCCCCCchhh---------e---eccc-hHHhhhhhcCCcccCchHHHHHHHHHHHH----------HH
Confidence 788888776432211111110 0 0000 0000011222222222 2222233332 12
Q ss_pred HH--HHHHHHHHHHHHHHHHHHHHhcCCCCeecc--C--CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCe
Q psy13922 334 SR--EKQSVLDSLKQRAKMVADTFNSIEGMSCNP--V--QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGI 407 (509)
Q Consensus 334 ~~--~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI 407 (509)
.+ .++.+.++.+++.+++.+.|++++++.+.. + .++..+.+.++-+.. + .+..+...++ ++||
T Consensus 265 ~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~--------~--~~~~~~~~l~-~~~i 333 (378)
T PRK03080 265 NSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQA--------A--VDAAAVAKLL-RENG 333 (378)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchH--------H--HHHHHHHHHH-HcCC
Confidence 22 257778888889999999999886666542 1 232333333331000 0 1223344554 4588
Q ss_pred EEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--c
Q psy13922 408 CIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--P 485 (509)
Q Consensus 408 ~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~ 485 (509)
.+..|..... .+ .||+|+. +
T Consensus 334 ~v~~g~~~~~------------------------------------------------~~----------~vRis~~~~~ 355 (378)
T PRK03080 334 AVDIEPYRDA------------------------------------------------PN----------GLRIWCGPTV 355 (378)
T ss_pred eeccccccCC------------------------------------------------CC----------cEEEecCCCC
Confidence 8876542111 22 7999988 8
Q ss_pred ChHHHHHHHHHHHHHHHHHHh
Q psy13922 486 QPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 486 ~~~~i~~~~~~l~~~~~~~~~ 506 (509)
++++|+.+++.|++++++++.
T Consensus 356 t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 356 EPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999887654
No 285
>PRK05965 hypothetical protein; Provisional
Probab=99.66 E-value=1.9e-14 Score=151.97 Aligned_cols=214 Identities=14% Similarity=0.093 Sum_probs=135.1
Q ss_pred CHHHHHHHHHHHhcccCCCcc-cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVG-SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~-~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd 101 (509)
+|.|.+++.+++......... .|. .+.+..+++.+.+... -..+.++++++++||++.+++..+.- |.
T Consensus 64 ~p~i~~Ai~~q~~~~~~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~ 136 (459)
T PRK05965 64 QESIVEAAAEQMRELPYATGYFHFG-----SEPAIRLAAKLAERAP--GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGR 136 (459)
T ss_pred CHHHHHHHHHHHHhcCCcccccccC-----CHHHHHHHHHHHhhCC--CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCC
Confidence 588999999999873211110 121 2233445555543322 13458999999999999999986542 32
Q ss_pred CCCCeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCC--CCCCCCC--------HHHHHHHHHhhhccCC
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDE--SKQWGLP--------ISELERSITEARKHCN 158 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~--~~~~~~d--------~~~L~~~i~~~~~~~~ 158 (509)
+.|..|+....+|++........ +. .+..++... ...+.-| ++.+++.+.... ..+
T Consensus 137 ~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~ 215 (459)
T PRK05965 137 PSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELG-ADN 215 (459)
T ss_pred CCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcC-CCc
Confidence 23557999999999875432221 11 011222110 0001123 256777776421 126
Q ss_pred ceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 159 PRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
+.+|++...+...|. ..|++.+++|.++|++||+++|.||++..|...| .+..... .++.++ ++ +++
T Consensus 216 iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG--~~~a~~~--~gv~PD-----iv---~~g 283 (459)
T PRK05965 216 VAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTG--PLFACEA--EGVVPD-----LM---TVA 283 (459)
T ss_pred eEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCc--hhhhHhh--cCCCCC-----eE---Eec
Confidence 888888766666776 6788999999999999999999999999987654 2222222 122222 44 569
Q ss_pred cccCCCCC-CeeEEEeeecCCHHHHHHHH
Q psy13922 238 KGYMGECG-LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 238 K~~~G~~G-lr~G~v~~~~~~~~~~~~l~ 265 (509)
|.+ | .| +++|.++ .++++++.+.
T Consensus 284 Kgl-~-gG~~Pi~av~---~~~~i~~~~~ 307 (459)
T PRK05965 284 KGL-T-SGYVPMGAVL---MSDHVYQGIA 307 (459)
T ss_pred hhh-c-cCCcceeEEE---EcHHHHHHHh
Confidence 999 4 79 5999998 7899988775
No 286
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=7.5e-14 Score=146.75 Aligned_cols=213 Identities=12% Similarity=0.098 Sum_probs=129.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++..........|. .+....+|+.+.+..+.+ ..+.++++++++||++.+++..+.... +++
T Consensus 72 ~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~lAe~L~~~~p~~-~~~~v~f~~SGsEA~e~AlklAr~~tg--r~~ 143 (441)
T PRK05769 72 HPKVVKAVKEQAEKFLHYSLTDFY-----YEPAVELAERLVEIAPGG-FEKKVFFTNSGTESNEAAIKIARYHTG--RKY 143 (441)
T ss_pred CHHHHHHHHHHHHhccCccCcccC-----CHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHHHHHHHHHHHHhC--CCe
Confidence 588999999999872211111121 233455555554432210 135899999999999999998765422 457
Q ss_pred EEEcCCCChhHHHHHHhc-CC-------------EEEEEecCCCC--CCC-CC--------HHHHHHHH-HhhhccCCce
Q psy13922 107 VLIPIPQYPLYSASLAEF-NM-------------EQIGYYLDESK--QWG-LP--------ISELERSI-TEARKHCNPR 160 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~--~~~-~d--------~~~L~~~i-~~~~~~~~~~ 160 (509)
|+...-+|++....+... +. .+..++..... .|. -| ++.+++.+ +......++.
T Consensus 144 Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~ia 223 (441)
T PRK05769 144 IIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVA 223 (441)
T ss_pred EEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceE
Confidence 999899999876544322 11 12222221100 011 01 23355422 2111112678
Q ss_pred EEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 161 AIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 161 ~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
+|++.......|. ..+++.+++|.++|++||+++|+||++.+|...+ ...+...+ .+.+ +++ ++||.
T Consensus 224 avi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G--~~~a~~~~--gv~p-----Div---t~~K~ 291 (441)
T PRK05769 224 AIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTG--KMFAIEHF--GVEP-----DII---TLAKA 291 (441)
T ss_pred EEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc--ceehhhcc--CCCC-----CEE---EEccc
Confidence 8888656666676 5678999999999999999999999999876554 22222221 1222 144 57999
Q ss_pred cCCCCCCeeEEEeeecCCHHHHHHH
Q psy13922 240 YMGECGLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~~~~~l 264 (509)
+ | .|+++|+++ .++++++.+
T Consensus 292 l-~-~G~p~gav~---~~~~i~~~~ 311 (441)
T PRK05769 292 I-A-GGLPLGAVI---GRAELMFLP 311 (441)
T ss_pred c-c-CCcccEEEE---EehhhhhcC
Confidence 9 5 789999988 677776543
No 287
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.66 E-value=2.7e-15 Score=136.05 Aligned_cols=165 Identities=16% Similarity=0.159 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH-HHHHhcCCEEEEEecC
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS-ASLAEFNMEQIGYYLD 134 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~ 134 (509)
.++++.++++++ ...+++++++|+++++..++.++.++++ +|+++.++|.+.. ..++..|.++..++.+
T Consensus 3 ~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 3 EELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGD----EVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCC----EEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 578888888883 4567899999999999999999987777 9999999999988 8888999999999887
Q ss_pred CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccH
Q psy13922 135 ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSF 214 (509)
Q Consensus 135 ~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~ 214 (509)
+......+.+.+++.... .+++++++++++||+|...+ +++|.++|+++|+++|+|++|..+...... ...
T Consensus 73 ~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~--~~~ 143 (170)
T cd01494 73 DAGYGGLDVAILEELKAK----PNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG--VLI 143 (170)
T ss_pred CCCccchhhhhhhhcccc----CceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc--ccc
Confidence 654333333355443322 27899999999999999987 488888999999999999999987654311 000
Q ss_pred HHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 215 KKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 215 ~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
... .. .+++.|++|.+ |. .++|+++
T Consensus 144 ----~~~-----~~-d~~~~s~~K~~-~~--~~~G~l~ 168 (170)
T cd01494 144 ----PEG-----GA-DVVTFSLHKNL-GG--EGGGVVI 168 (170)
T ss_pred ----ccc-----cC-CEEEEEccccc-CC--CceEEEE
Confidence 010 11 35566999999 43 6789986
No 288
>PRK07046 aminotransferase; Validated
Probab=99.66 E-value=5.8e-14 Score=147.78 Aligned_cols=202 Identities=13% Similarity=0.114 Sum_probs=130.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+ .....+ +. +...++++.+.+.. ..+.+.++++++||...+++..+.-.. |+.
T Consensus 93 ~p~i~~Av~~q~~~---~~~~~~-~~----~~~~~lAe~l~~~~----~~~~v~F~nSGtEA~e~AlrlAR~~TG--r~~ 158 (453)
T PRK07046 93 PAPVARALAEQARR---GLTTML-PS----EDAAWVGEELARRF----GLPYWQVATTATDANRFVLRWARAVTG--RPK 158 (453)
T ss_pred CHHHHHHHHHHHHh---CCCCCC-CC----HHHHHHHHHHHHHh----CCCEEEEECCHHHHHHHHHHHHHHhhC--CCE
Confidence 58999999999987 333222 22 34444555554432 257899999999999999998765432 458
Q ss_pred EEEcCCCChhHHHHHHh--cCCEEE------EEe--cCCC---CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC-
Q psy13922 107 VLIPIPQYPLYSASLAE--FNMEQI------GYY--LDES---KQWGLPISELERSITEARKHCNPRAIVIINPGNPTG- 172 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~--~g~~~~------~v~--~~~~---~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG- 172 (509)
|+...-+|+++...... .+.+.. .++ .... -.| -|++.+++.+... ++.+|++.....-.|
T Consensus 159 ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~----~vAavi~EPi~g~~G~ 233 (453)
T PRK07046 159 ILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADG----DVAAVLAEPAMTNIGM 233 (453)
T ss_pred EEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCC----CeEEEEECCCCCCCCC
Confidence 99999999997432211 110000 000 0000 011 2788998888532 688888854444445
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
...+++.++++.++|++||+++|.||++. |..+-+. .... .++.++ ++ +++|.+ | .|+++|.++
T Consensus 234 ~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg----~~~~-~gv~PD-----i~---t~gK~l-g-gG~Pi~av~ 297 (453)
T PRK07046 234 VLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGG----YTRA-HGLEPD-----FL---VVGKPI-A-GGVPCAVYG 297 (453)
T ss_pred cCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcc----hhHH-hCCCcc-----ce---eehhhh-c-CCCcceeee
Confidence 46677899999999999999999999997 5332221 1111 122222 33 679999 5 799999987
Q ss_pred eecCCHHHHHHHHH
Q psy13922 253 VINLDPGVKAMLHK 266 (509)
Q Consensus 253 ~~~~~~~~~~~l~~ 266 (509)
.++++++.+..
T Consensus 298 ---g~~~i~~~~~~ 308 (453)
T PRK07046 298 ---FSAELAERAQA 308 (453)
T ss_pred ---ehHHHHHHHhh
Confidence 79999998863
No 289
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=1.9e-14 Score=150.53 Aligned_cols=212 Identities=9% Similarity=0.089 Sum_probs=131.0
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
.|.|.+++.+++.+........| ......+|.+.+++.+ . ...+.+++++++++|++.+++..+.- +.+
T Consensus 62 ~p~v~~ai~~q~~~~~~~~~~~~-~~~~~~~lae~L~~~~----p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~ 134 (429)
T PRK06173 62 HPRLNAAATNQLAKMSHIMFGGF-THEPAVELAQKLLEIL----P--PSLNKIFFADSGSVAVEVAMKMALQYQQAKGEV 134 (429)
T ss_pred CHHHHHHHHHHHHhcCCcccccc-CCHHHHHHHHHHHhhC----C--CCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCC
Confidence 48899999999987321111112 2222234444444433 2 12368999999999999999887642 222
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CC-------------EEEEEecCCCCCCC-----CCHHHHHHHHHhhhccCCceEEE
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NM-------------EQIGYYLDESKQWG-----LPISELERSITEARKHCNPRAIV 163 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~~~-----~d~~~L~~~i~~~~~~~~~~~iv 163 (509)
.+.+|+....+|++........ |- .+..+|.... .+. -+++.|++.+.... .++.+|+
T Consensus 135 ~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~l~~l~~~i~~~~--~~iAAvi 211 (429)
T PRK06173 135 QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI-KFGEEWNDEAIEPLQDLLEQKG--DEIAALI 211 (429)
T ss_pred CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc-ccchhHHHHHHHHHHHHHHhCC--CcEEEEE
Confidence 3457999999999854322211 10 0111221100 010 13566777776321 2688888
Q ss_pred EeCC-CCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 164 IINP-GNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 164 i~~p-~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
+... +.-.|. ..+++.+++|.++|++||+++|+||++.+|..+| ....... .++.++ ++ +++|.+
T Consensus 212 ~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG--~~~a~~~--~gv~PD-----iv---~~gK~l- 278 (429)
T PRK06173 212 LEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTG--KLFALEH--AGVVPD-----IM---CIGKAL- 278 (429)
T ss_pred EcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCC--cchHHHh--cCCCCC-----EE---Eeehhh-
Confidence 8753 676776 4799999999999999999999999998875443 1211211 122221 33 479999
Q ss_pred CCCC-CeeEEEeeecCCHHHHHHHH
Q psy13922 242 GECG-LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 242 G~~G-lr~G~v~~~~~~~~~~~~l~ 265 (509)
| .| +.++.++ .++++++.+.
T Consensus 279 ~-gG~~p~~a~~---~~~~i~~~~~ 299 (429)
T PRK06173 279 T-GGYLTLSATI---TTEAIAQTIC 299 (429)
T ss_pred h-CCccccceEE---ecHHHHHHHh
Confidence 4 78 5888887 7889988875
No 290
>PRK07482 hypothetical protein; Provisional
Probab=99.65 E-value=5.6e-14 Score=148.43 Aligned_cols=215 Identities=15% Similarity=0.051 Sum_probs=134.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+.. ....+. ....+.+..+|+.+.+... -..+.++++++++||++.+++..+.. |..
T Consensus 68 ~p~v~~Av~~q~~~~~--~~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~ 141 (461)
T PRK07482 68 RTEVAEAIAEQAKELA--YYHTYV--GHGTEASITLSKRIIDRAP--AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRP 141 (461)
T ss_pred CHHHHHHHHHHHHhcC--cccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 7899999999998831 111110 0113445555555544322 12468999999999999999987532 322
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCCCCC---CC--------CCHHHHHHHHHhhhccCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDESKQ---WG--------LPISELERSITEARKHCN 158 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~---~~--------~d~~~L~~~i~~~~~~~~ 158 (509)
.|..|+.....|++....+..... .+..++.....+ +. -+++.+++.+.... ..+
T Consensus 142 ~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~ 220 (461)
T PRK07482 142 EKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEG-PDT 220 (461)
T ss_pred CCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcC-CCc
Confidence 356899999999987543322211 111111110000 00 03567777775321 126
Q ss_pred ceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 159 PRAIVIINPGNPTGQV-LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~~-~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
+.+|++...+.-.|.. .+++.+++|.++|++||+++|.||++..|...+. ...... .++.++ ++ +++
T Consensus 221 iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~--~~a~~~--~gv~PD-----iv---~~g 288 (461)
T PRK07482 221 IAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS--MFGSDH--YGIEPD-----LI---TVA 288 (461)
T ss_pred EEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc--hhhHHh--cCCCCC-----EE---EEc
Confidence 8888886556656764 6888999999999999999999999999866542 222222 223332 44 569
Q ss_pred cccCCCCCC-eeEEEeeecCCHHHHHHHH
Q psy13922 238 KGYMGECGL-RGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 238 K~~~G~~Gl-r~G~v~~~~~~~~~~~~l~ 265 (509)
|.++ .|. ++|.++ ..+++.+.+.
T Consensus 289 Kgl~--gG~~Pi~av~---~~~~i~~~~~ 312 (461)
T PRK07482 289 KGLT--SAYAPLSGSI---VGEKVWDVLE 312 (461)
T ss_pred cccc--cCccccceee---ecHHHHHHHh
Confidence 9994 785 999887 6888888775
No 291
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.65 E-value=1.4e-13 Score=139.71 Aligned_cols=167 Identities=20% Similarity=0.242 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----HHhcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----LAEFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~~~~g~~~~~v 131 (509)
..|.+.++.+- ..+..+.+++++.||..++..+.++|| +|+++...|.+.... +++.|.++..+
T Consensus 66 ~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD----~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~ 133 (396)
T COG0626 66 DALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGD----HVLLPDDLYGGTYRLFEKILQKFGVEVTFV 133 (396)
T ss_pred HHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCC----EEEecCCccchHHHHHHHHHHhcCeEEEEE
Confidence 56777777766 356788999999999999999999999 999999888876544 45678888877
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
+.. +.+.+++++.+. ++++|++.+|.||+-.+.+ +.+|+++|+++|+++|+|+.|....+..
T Consensus 134 d~~-------~~~~~~~~~~~~----~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~---- 195 (396)
T COG0626 134 DPG-------DDEALEAAIKEP----NTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQR---- 195 (396)
T ss_pred CCC-------ChHHHHHHhccc----CceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccC----
Confidence 533 456666666632 7999999999999988866 9999999999999999999998754431
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
++. .+. -|+++|.+|.++|...+=.|.++ +.++.+.+.+..
T Consensus 196 -PL~-----~Ga------DIVvhSaTKyl~GHsDvl~G~v~--~~~~~~~~~~~~ 236 (396)
T COG0626 196 -PLE-----LGA------DIVVHSATKYLGGHSDVLGGVVL--TPNEELYELLFF 236 (396)
T ss_pred -hhh-----cCC------CEEEEeccccccCCcceeeeEEe--cChHHHHHHHHH
Confidence 211 111 47789999999887777777554 356677776643
No 292
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.65 E-value=4.7e-14 Score=147.93 Aligned_cols=206 Identities=9% Similarity=0.017 Sum_probs=133.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
.|.|.+++.+++.+ .....+ +. +....+++.+.+... ..+.+++++++++|+..+++..+.-.. +..
T Consensus 71 ~p~v~~ai~~q~~~---~~~~~~-~~----~~~~~la~~l~~~~p---~~~~v~f~~sGseA~e~AlklAr~~tg--r~~ 137 (428)
T PRK12389 71 HPHITKAITEAAEN---GVLYGT-PT----ELEIEFAKMLKEAIP---SLEKVRFVNSGTEAVMTTIRVARAYTG--RTK 137 (428)
T ss_pred CHHHHHHHHHHHHh---CCccCC-CC----HHHHHHHHHHHHhCC---CCcEEEEeCCHHHHHHHHHHHHHHhhC--CCE
Confidence 58899999999987 222212 22 233445555443322 246899999999999999998765432 457
Q ss_pred EEEcCCCChhHHHHHHhc-CCEEEE--------Ee--cCCC-CCC-CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 107 VLIPIPQYPLYSASLAEF-NMEQIG--------YY--LDES-KQW-GLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~~~~~--------v~--~~~~-~~~-~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
|+...-+|++....+... |..... ++ ..+. ..+ ..|++.+++.+++.. .++.+|++....+..|.
T Consensus 138 ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~vaavi~EPv~g~~G~ 215 (428)
T PRK12389 138 IIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWG--DEVAAVLVEPIVGNFGI 215 (428)
T ss_pred EEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcC--CcEEEEEEeCCCCCCCC
Confidence 999899999876544332 211110 00 0000 000 126889988887432 25778888766666786
Q ss_pred -CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 174 -VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 174 -~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
..+++.+++|.++|++||+++|.||++..| ..+. ....+. .++.++ + .+++|.+ | .|+++|.++
T Consensus 216 ~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~---~~a~~~-~gv~PD-----i---vt~gK~l-g-gG~Pi~av~ 280 (428)
T PRK12389 216 VEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMY---GGAQDL-LGVEPD-----L---TALGKII-G-GGLPIGAYG 280 (428)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCc---chhhHH-hCCCCC-----e---eeechhh-c-CCCceeEEe
Confidence 557899999999999999999999999988 3321 111111 122222 3 3779999 4 789999997
Q ss_pred eecCCHHHHHHHH
Q psy13922 253 VINLDPGVKAMLH 265 (509)
Q Consensus 253 ~~~~~~~~~~~l~ 265 (509)
.++++++.+.
T Consensus 281 ---~~~~i~~~~~ 290 (428)
T PRK12389 281 ---GRKDIMEQVA 290 (428)
T ss_pred ---EHHHHHhhhc
Confidence 7899998875
No 293
>PLN02880 tyrosine decarboxylase
Probab=99.65 E-value=3.1e-13 Score=143.41 Aligned_cols=191 Identities=12% Similarity=0.091 Sum_probs=136.3
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCCCC-----CCcEEEeCCHHHHHHHHHHHhhcC-----C--CCCCCeEEEcCCCChh
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQPAD-----WQDVILSAGASDGIKSVLKLLIED-----V--DGKKPGVLIPIPQYPL 116 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~~-----g--d~~~~~Vlv~~p~y~~ 116 (509)
|....+..++.+.+.+|+.+.+|.+-. ...-++|+|+|+++..++.+.++. + ..++-.|++++-.|.+
T Consensus 114 ~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~S 193 (490)
T PLN02880 114 WITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSA 193 (490)
T ss_pred cccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHH
Confidence 444445688999999999999885522 124678899999887777665431 1 0012246678888999
Q ss_pred HHHHHHhcCCE---EEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCc
Q psy13922 117 YSASLAEFNME---QIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKL 192 (509)
Q Consensus 117 ~~~~~~~~g~~---~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i 192 (509)
...++..+|.. ++.||.+..+++.+|++.|++.|++..+. ..+-+|+.+...-.||.+-| +++|+++|++||+
T Consensus 194 v~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~i 270 (490)
T PLN02880 194 LQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNGM 270 (490)
T ss_pred HHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcCC
Confidence 99999999984 78888886556799999999999875332 23555666788899999966 9999999999999
Q ss_pred EEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 193 FLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 193 ~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
|+++|.+|+.+..-. +.+......+ ...+.+++ +++|.+ + .....|.+.+
T Consensus 271 wlHVDaA~gg~~~~~----~~~~~~l~gi----e~aDSit~-d~HKwl-~-~P~~~g~llv 320 (490)
T PLN02880 271 WFHVDAAYAGSACIC----PEYRHYIDGV----EEADSFNM-NAHKWF-L-TNFDCSLLWV 320 (490)
T ss_pred EEEEehhhHHHHHhC----HHHHHHhcCc----hhcCEEEE-Cchhhc-C-CCccEEEEEE
Confidence 999999998865321 1122222211 12236766 889998 3 6677888875
No 294
>KOG0053|consensus
Probab=99.65 E-value=1.4e-13 Score=138.08 Aligned_cols=177 Identities=18% Similarity=0.204 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH----hcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA----EFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~----~~g~~~~~v 131 (509)
..+.+.+++.. ...+++++++++.|+..++..|+..|+ +|+..+.+|.+....++ ..|.+...+
T Consensus 80 ~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~----~iV~~~~~Y~gT~~~l~~~~~~~gie~~~v 147 (409)
T KOG0053|consen 80 DVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGD----HIVATGDVYGGTLRILRKFLPKFGGEGDFV 147 (409)
T ss_pred HHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCC----cEEEeCCCcccHHHHHHHHHHHhCceeeee
Confidence 44566666555 345688888888999999999999888 99999999999776654 458888777
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
..+ |++.+++++++ ++++|++.+|.||+..+.+ +++|.++|+++|+++|+|+.+......
T Consensus 148 d~~-------~~~~~~~~i~~-----~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~----- 207 (409)
T KOG0053|consen 148 DVD-------DLKKILKAIKE-----NTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ----- 207 (409)
T ss_pred chh-------hHHHHHHhhcc-----CceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc-----
Confidence 654 57888888887 8999999999999999966 899999999999999999999875322
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchh
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
....+ +. -|+++|.+|.++|...+=.|.++. ..+++..+++..+. ..++.+..
T Consensus 208 -~pL~l----GA------DIV~hSaTKyi~Ghsdvi~G~iv~--n~~~~~~~l~~~~~~lg~~~~p~ 261 (409)
T KOG0053|consen 208 -DPLPL----GA------DIVVHSATKYIGGHSDVIGGSVVL--NSEELASRLKFLQEDLGWCEDPF 261 (409)
T ss_pred -Chhhc----CC------CEEEEeeeeeecCCcceeeeEEec--CcHHHHHHHHHHHHHhcCCCCHH
Confidence 11111 11 467899999998887777787762 45899999988775 23344443
No 295
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=2.7e-13 Score=142.89 Aligned_cols=210 Identities=15% Similarity=0.126 Sum_probs=128.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+...... .|.......+|-+.+++.. + ...+.++++++++||++.+++..+.... +..
T Consensus 71 ~p~i~~Ai~~ql~~~~~~~~-~~~~~~~~~~lae~L~~~~----p--~~~~~v~f~~SGsEA~e~AlklAr~~tg--r~~ 141 (457)
T PRK05639 71 HPKLVKAVQEQVALIQHSMI-GYTHSERAIRVAEKLAEIS----P--IENPKVLFGLSGSDAVDMAIKVSKFSTR--RPW 141 (457)
T ss_pred CHHHHHHHHHHHHhcccccc-CccCCHHHHHHHHHHHhhC----C--CCcCEEEEeCchHHHHHHHHHHHHHhcC--CCe
Confidence 67899999999887321111 1332222233444444432 2 1225899999999999999998865432 457
Q ss_pred EEEcCCCChhHHHHHHhc-CC-------------EEEEEecCCCC--CCC----CCHH--------HHHHHHHhh-hccC
Q psy13922 107 VLIPIPQYPLYSASLAEF-NM-------------EQIGYYLDESK--QWG----LPIS--------ELERSITEA-RKHC 157 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~--~~~----~d~~--------~L~~~i~~~-~~~~ 157 (509)
|+....+|++....+... +. .+..+|..... .|. -|.+ .+++.+... ....
T Consensus 142 ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~ 221 (457)
T PRK05639 142 ILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPD 221 (457)
T ss_pred EEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999876543322 11 12223322110 000 0222 344433211 0113
Q ss_pred CceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec
Q psy13922 158 NPRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC 236 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 236 (509)
++.+|++...+...|. ..+++.+++|.++|++||+++|.||++..|...+ ....... .++.++ ++ ++
T Consensus 222 ~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG--~~~a~~~--~gv~PD-----iv---~~ 289 (457)
T PRK05639 222 EVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTG--KWFASEW--FEVKPD-----LI---IF 289 (457)
T ss_pred ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCc--hHHHHHh--cCCCCC-----EE---Ee
Confidence 6888888766666676 6678999999999999999999999999875543 1112111 122222 44 46
Q ss_pred ccccCCCCCCeeEEEeeecCCHHHHH
Q psy13922 237 SKGYMGECGLRGGYSEVINLDPGVKA 262 (509)
Q Consensus 237 SK~~~G~~Glr~G~v~~~~~~~~~~~ 262 (509)
+|.+ | .|+++|.++ .++++++
T Consensus 290 gK~l-~-gG~pi~av~---~~~~i~~ 310 (457)
T PRK05639 290 GKGV-A-SGMGLSGVI---GRKELMD 310 (457)
T ss_pred chhh-c-CCCcceeEE---ehHHHHh
Confidence 9999 4 789999998 7888888
No 296
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.64 E-value=6.4e-14 Score=147.23 Aligned_cols=215 Identities=13% Similarity=0.134 Sum_probs=132.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.+.+++.+++.+........+. .+....+++.+.+... -..+.|++++++++|++.+++..+.. +.+
T Consensus 64 ~p~v~~ai~~ql~~l~~~~~~~~~-----~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~ 136 (442)
T PRK13360 64 RPEIVEAVRAQAGELDYAPAFQMG-----HPKAFELANRIAEIAP--GGLNHVFFTNSGSESVDTALKIALAYHRARGEG 136 (442)
T ss_pred CHHHHHHHHHHHHhCCCcccCCcC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 688999999999873211111121 2334445555543321 12358999999999999999876532 212
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-C------------CEEEEEecCC--C-CCCCC--------CHHHHHHHHHhhhccCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-N------------MEQIGYYLDE--S-KQWGL--------PISELERSITEARKHCN 158 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~--~-~~~~~--------d~~~L~~~i~~~~~~~~ 158 (509)
.|.+|+....+|++....+... | ..+..+|... . ..|.. ..+.|++.+.... ..+
T Consensus 137 ~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-~~~ 215 (442)
T PRK13360 137 SRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHD-AST 215 (442)
T ss_pred CCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcC-CCc
Confidence 2458999999999875432211 1 1122222211 0 01111 1456777775321 125
Q ss_pred ceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 159 PRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
+.+|++.......|. ..+++.+++|.++|++||+++|+||++..|...|. ...... .++.++ + .+++
T Consensus 216 ~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~--~~a~~~--~gv~PD-----i---vt~g 283 (442)
T PRK13360 216 IAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA--PFAAQY--FGVTPD-----L---LTCA 283 (442)
T ss_pred EEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chhhhh--cCCCCc-----e---eeee
Confidence 778887666666776 56889999999999999999999999988755442 212111 122222 3 3779
Q ss_pred cccCCCCC-CeeEEEeeecCCHHHHHHHHH
Q psy13922 238 KGYMGECG-LRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 238 K~~~G~~G-lr~G~v~~~~~~~~~~~~l~~ 266 (509)
|.+ | .| +++|.++ .++++++.+..
T Consensus 284 K~l-~-gG~~P~gav~---~~~~i~~~~~~ 308 (442)
T PRK13360 284 KGL-T-NGAIPMGAVF---VSSEIHDAFMQ 308 (442)
T ss_pred ecc-c-cCccceEEEE---EcHHHHHHhhc
Confidence 999 4 56 7999987 68898887753
No 297
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.64 E-value=4.5e-14 Score=147.53 Aligned_cols=213 Identities=12% Similarity=0.164 Sum_probs=133.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+........+ . .+.+..+++.|.+..+ -..+.++++++++||++.+++..+.- |.
T Consensus 61 ~p~i~~Ai~~q~~~~~~~~~~~~-~----~~~~~~la~~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~- 132 (428)
T PRK07986 61 HPQLNAAMKSQIDAMSHVMFGGI-T----HPPAIELCRKLVAMTP--QPLECVFLADSGSVAVEVAMKMALQYWQAKGE- 132 (428)
T ss_pred CHHHHHHHHHHHhhcCCcccccc-C----CHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCC-
Confidence 58899999999987321111111 1 2344555655544322 12368999999999999999987642 21
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CCE-------------EEEEecCCCC---CC-CCCHHHHHHHHHhhhccCCceEEEE
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NME-------------QIGYYLDESK---QW-GLPISELERSITEARKHCNPRAIVI 164 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~~-------------~~~v~~~~~~---~~-~~d~~~L~~~i~~~~~~~~~~~ivi 164 (509)
++.+|+....+|++....+... +-. +..++..... .+ .-|++.+++.++... .++.+|++
T Consensus 133 ~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~--~~iaavi~ 210 (428)
T PRK07986 133 PRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHR--HEIAAVIL 210 (428)
T ss_pred CCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCC--CcEEEEEE
Confidence 2458999999999865433322 210 1122211000 01 125667787776421 25677777
Q ss_pred eC-CCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 165 IN-PGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 165 ~~-p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
.. .+.-.|. ..+++.+++|.++|++||+++|+||++..|...|. ...... .++.+ +++ +++|.+ |
T Consensus 211 Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~--~fa~~~--~gv~P-----Di~---t~gK~l-~ 277 (428)
T PRK07986 211 EPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGK--LFACEH--AGIAP-----DIL---CLGKAL-T 277 (428)
T ss_pred echhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCC--eeeecc--cCCCC-----CEE---Eechhh-h
Confidence 65 3565675 56779999999999999999999999988755432 212111 11211 144 579999 4
Q ss_pred CCC-CeeEEEeeecCCHHHHHHHHH
Q psy13922 243 ECG-LRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 243 ~~G-lr~G~v~~~~~~~~~~~~l~~ 266 (509)
.| +++|.++ .++++++.+..
T Consensus 278 -gG~~p~~av~---~~~~i~~~~~~ 298 (428)
T PRK07986 278 -GGTMTLSATL---TTREVAETISN 298 (428)
T ss_pred -CCcccCcchh---chHHHHHHhhc
Confidence 78 6999887 78999998864
No 298
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.64 E-value=6.7e-14 Score=147.19 Aligned_cols=214 Identities=11% Similarity=0.104 Sum_probs=132.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++..........|. .+....+++.|.+... -..+.|++++++++|++.+++..+.- +.+
T Consensus 67 ~p~v~~ai~~ql~~l~~~~~~~~~-----~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~ 139 (445)
T PRK09221 67 RPEIVEAVARQAATLDYAPAFQMG-----HPLAFELAERLAELAP--GGLDHVFFTNSGSESVDTALKIALAYHRARGQG 139 (445)
T ss_pred CHHHHHHHHHHHHhccCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 688999999998873211111121 2233445555543322 12358999999999999999876532 222
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCC---CCCCCC--------CHHHHHHHHHhhhccCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDE---SKQWGL--------PISELERSITEARKHCN 158 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~---~~~~~~--------d~~~L~~~i~~~~~~~~ 158 (509)
.+.+|+....+|++....+... |. .+..+|... ...+.. ..+.+++.++.... .+
T Consensus 140 ~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~-~~ 218 (445)
T PRK09221 140 TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDA-ST 218 (445)
T ss_pred CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCC-Cc
Confidence 3558999999999875433222 10 122222211 000111 13566776754211 26
Q ss_pred ceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 159 PRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
+.+|++.......|. ..+++.+++|.++|++||+++|+||++..|...|. ...... .++.++ +.+++
T Consensus 219 iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~--~~~~~~--~gv~PD--------i~~~g 286 (445)
T PRK09221 219 IAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA--AFAAER--FGVTPD--------IITFA 286 (445)
T ss_pred EEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCch--hhHHHh--cCCCCC--------EEEec
Confidence 778888766777787 56788999999999999999999999988765442 222221 122221 33779
Q ss_pred cccCCCCC-CeeEEEeeecCCHHHHHHHH
Q psy13922 238 KGYMGECG-LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 238 K~~~G~~G-lr~G~v~~~~~~~~~~~~l~ 265 (509)
|.+ | .| +++|.++ .++++++.+.
T Consensus 287 K~l-~-gG~~Pi~av~---~~~~i~~~~~ 310 (445)
T PRK09221 287 KGL-T-NGAIPMGAVI---ASDEIYDAFM 310 (445)
T ss_pred ccc-c-cCcccceeeE---EcHHHHHhhc
Confidence 999 4 56 6899987 6888888775
No 299
>PLN02590 probable tyrosine decarboxylase
Probab=99.64 E-value=1.3e-12 Score=139.10 Aligned_cols=200 Identities=13% Similarity=0.101 Sum_probs=142.5
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCCCC-----CCcEEEeCCHHHHHHHHHHHhhcC-----C--CCCCCeEEEcCCCChh
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQPAD-----WQDVILSAGASDGIKSVLKLLIED-----V--DGKKPGVLIPIPQYPL 116 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~~-----g--d~~~~~Vlv~~p~y~~ 116 (509)
|....+..++.+.+.+|+.+.+|.+-. ...-++|+|+++++..++.+.++. + ...+-.|.+++-.|.+
T Consensus 162 ~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~S 241 (539)
T PLN02590 162 WLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSS 241 (539)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHH
Confidence 655666789999999999999986532 134677899999887776665431 1 0012245567888999
Q ss_pred HHHHHHhcCC---EEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCc
Q psy13922 117 YSASLAEFNM---EQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKL 192 (509)
Q Consensus 117 ~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i 192 (509)
+..++..+|. .++.||.+..+++.+|++.|++.|++..+. ..|-+|+.+...-.||.+ +.+++|+++|++||+
T Consensus 242 v~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai---Dpl~~Ia~i~~~~g~ 318 (539)
T PLN02590 242 FRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV---DPLVPLGNIAKKYGI 318 (539)
T ss_pred HHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCC
Confidence 9999999988 588889886556799999999999875332 235556667888889998 669999999999999
Q ss_pred EEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH-HHHHHH
Q psy13922 193 FLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP-GVKAML 264 (509)
Q Consensus 193 ~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~-~~~~~l 264 (509)
|+.+|.+|+.+..- .+....+...+ +..+.|.+ +++|.+ + .....|.+++ .++ .+.+.+
T Consensus 319 WlHVDaA~GG~al~----~~~~r~~~~Gi----e~ADSit~-D~HK~l-~-~p~~cg~llv--r~~~~l~~a~ 378 (539)
T PLN02590 319 WLHVDAAYAGNACI----CPEYRKFIDGI----ENADSFNM-NAHKWL-F-ANQTCSPLWV--KDRYSLIDAL 378 (539)
T ss_pred eEEEecchhhhhhc----ChhhHHHhcCC----ccCCEEEE-Cchhhc-C-cCcCEEEEEe--cCHHHHHHHh
Confidence 99999999987632 11222222222 13457877 889998 3 6678887765 655 344444
No 300
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.64 E-value=4.7e-14 Score=147.50 Aligned_cols=208 Identities=11% Similarity=0.005 Sum_probs=131.0
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++... ....+. . +.+.++++.+.+..+ ...+.++++++++||+..+++..+.-.. |..
T Consensus 71 ~p~v~~ai~~q~~~~---~~~~~~-~----~~~~~la~~L~~~~~--~~~~~v~f~~SGsEA~e~AiklAr~~tg--r~~ 138 (433)
T PRK00615 71 HPKICDAIQQGAERG---TSYGLT-S----EQEILFAEELFSYLG--LEDHKIRFVSSGTEATMTAVRLARGITG--RSI 138 (433)
T ss_pred CHHHHHHHHHHHHhC---CCCCCC-C----HHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHHHHHHHHHHhhC--CCE
Confidence 689999999999872 222122 2 234444555544322 1236899999999999999998765432 457
Q ss_pred EEEcCCCChhHHHH---HHhcCCEE-EEEe----cCCCCC----C-CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 107 VLIPIPQYPLYSAS---LAEFNMEQ-IGYY----LDESKQ----W-GLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 107 Vlv~~p~y~~~~~~---~~~~g~~~-~~v~----~~~~~~----~-~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
|+...-+|+++... ....+... ..++ ..+... + .-|++.+++.+.... .++.+|++.......|.
T Consensus 139 ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~aavI~Epv~~~~G~ 216 (433)
T PRK00615 139 IIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLG--HRVAGVIFEPICANMGV 216 (433)
T ss_pred EEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcC--CceEEEEECCCCCCCCc
Confidence 88889899986521 11111000 0000 000000 0 126888998886532 25677777655555676
Q ss_pred -CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 174 -VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 174 -~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
..+++.+++|.++|++||+++|+||++.+| ..+. .-.... .++.++ ++ +++|.+ | .|+++|+++
T Consensus 217 ~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~--~ga~~~--~gv~PD-----i~---~~gK~l-g-gG~p~~av~ 281 (433)
T PRK00615 217 VLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQ--GGAAAI--YHVKPD-----IT---VYGKIL-G-GGLPAAAVV 281 (433)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccH--hHHHHh--cCCCCC-----eE---EEcccc-c-CCcceeeee
Confidence 556889999999999999999999999877 3331 111111 122221 33 579999 5 789999998
Q ss_pred eecCCHHHHHHHHH
Q psy13922 253 VINLDPGVKAMLHK 266 (509)
Q Consensus 253 ~~~~~~~~~~~l~~ 266 (509)
.++++++.+..
T Consensus 282 ---~~~~i~~~~~~ 292 (433)
T PRK00615 282 ---AHKSIMDHLAP 292 (433)
T ss_pred ---ecHHHHhhhcC
Confidence 79999998853
No 301
>PRK06917 hypothetical protein; Provisional
Probab=99.63 E-value=2.9e-13 Score=142.46 Aligned_cols=215 Identities=13% Similarity=0.090 Sum_probs=132.4
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc----CCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE----DVDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~----~gd~ 102 (509)
+|.|.+++.+++.+. .+. +..... .+.+.++++.+.+... -..+.+++++++++|++.+++..+. .+..
T Consensus 49 hp~v~~Ai~~ql~~~---~~~-~~~~~~-~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t 121 (447)
T PRK06917 49 VKEIADAIKEQAEEV---SFV-YRSQFT-SEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEANETAMKIAIQHFQERGIQ 121 (447)
T ss_pred CHHHHHHHHHHHhhC---cCc-cccccC-CHHHHHHHHHHHHhCC--CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCC
Confidence 689999999999883 222 111001 2344455555544322 1225799999999999999998743 1222
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCCCCC--CCC--------CHHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDESKQ--WGL--------PISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~--~~~--------d~~~L~~~i~~~~~~~~~ 159 (509)
.|.+|+....+|+++...+... +. .+..++...... +.- +++.+++.++.... .++
T Consensus 122 ~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~-~~i 200 (447)
T PRK06917 122 GKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGA-EHI 200 (447)
T ss_pred CCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC-Cce
Confidence 3558999999999876544332 11 011121110000 011 23566766664211 257
Q ss_pred eEEEEeCCC-CCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 160 RAIVIINPG-NPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 160 ~~ivi~~p~-NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
.+|++.... |-.|. ..+++.+++|.++|++||+++|.||++..|...+ ....... .++.++ + .+++
T Consensus 201 AAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG--~~~a~~~--~gv~PD-----i---~~~g 268 (447)
T PRK06917 201 AAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG--AMFAMEH--WGVEPD-----I---MTLG 268 (447)
T ss_pred EEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc--chhhHHh--cCCCCC-----E---EEee
Confidence 888886443 44454 6789999999999999999999999999875543 2222221 122222 3 3679
Q ss_pred cccCCCCCC-eeEEEeeecCCHHHHHHHHH
Q psy13922 238 KGYMGECGL-RGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 238 K~~~G~~Gl-r~G~v~~~~~~~~~~~~l~~ 266 (509)
|.+ | .|+ ++|.++ .++++++.+..
T Consensus 269 K~l-~-~G~~Pi~a~~---~~~~i~~~~~~ 293 (447)
T PRK06917 269 KGL-G-AGYTPIAATV---VSDRVMEPILR 293 (447)
T ss_pred ehh-c-cCCcceEEEE---EcHHHHHHHhc
Confidence 999 4 785 999998 68899888753
No 302
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.63 E-value=2.2e-13 Score=143.46 Aligned_cols=213 Identities=13% Similarity=0.135 Sum_probs=134.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc----CCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE----DVDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~----~gd~ 102 (509)
+|.|.+++.+++.+........|. .+....+++.+.+..+. ..+.+++++++++|++.+++.... .+..
T Consensus 72 ~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~lAe~L~~~~p~--~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~ 144 (453)
T PRK06943 72 NPRINAALKDQLDTLEHAMLAGCT-----HEPAIELAERLAALTGG--TLGHAFFASDGASAVEIALKMSFHAWRNRGRG 144 (453)
T ss_pred CHHHHHHHHHHHHhcCCccccccC-----CHHHHHHHHHHHHhCCC--CCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 689999999999873211111122 22344455555433221 125899999999999999998743 1222
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCCCC--CCC--------CCHHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDESK--QWG--------LPISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~--~~~--------~d~~~L~~~i~~~~~~~~~ 159 (509)
.+.+|+....+|++....+... |. .+..++..... .+. -+++.+++.++... .++
T Consensus 145 ~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~i 222 (453)
T PRK06943 145 DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERA--GKI 222 (453)
T ss_pred CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCC--Cce
Confidence 3458999999999876433221 11 11222221110 001 12466777775321 268
Q ss_pred eEEEEeC-CCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 160 RAIVIIN-PGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 160 ~~ivi~~-p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
.+|++.. .+.-.|. ..+++.+++|.++|++||+++|.||++..|...+ .......+ ++.++ ++ +++
T Consensus 223 AAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG--~~fa~~~~--gv~PD-----iv---t~g 290 (453)
T PRK06943 223 AALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG--TFFACEQA--GVWPD-----FL---CLS 290 (453)
T ss_pred EEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCc--chhHHHhC--CCCCC-----eE---eee
Confidence 8888875 3666676 6789999999999999999999999999986654 22222221 22222 44 559
Q ss_pred cccCCCCC-CeeEEEeeecCCHHHHHHHH
Q psy13922 238 KGYMGECG-LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 238 K~~~G~~G-lr~G~v~~~~~~~~~~~~l~ 265 (509)
|.+ | .| +++|.++ .++++.+.+.
T Consensus 291 Kgl-~-gG~~Pi~av~---~~~ei~~~~~ 314 (453)
T PRK06943 291 KGI-S-GGYLPLSLVL---SRDAIFAAFY 314 (453)
T ss_pred hhh-c-cCcccceEEE---EcHHHHHhhc
Confidence 999 4 78 5999998 7889988775
No 303
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.7e-13 Score=144.62 Aligned_cols=208 Identities=13% Similarity=0.088 Sum_probs=128.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+.... ...|. .+.+..+++.+.+..+ -..+.+++++++++|++.+++..+.-.. +..
T Consensus 89 ~p~v~~Ai~~ql~~~~~~-~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~tg--r~~ 158 (459)
T PRK06082 89 HPHVIEKVKEQMAKLPFS-PRRFT-----NETAIECAEKLTEIAG--GELNRVLFAPGGTSAIGMALKLARHITG--NFK 158 (459)
T ss_pred CHHHHHHHHHHHHhCCCc-cCccC-----CHHHHHHHHHHHHhCC--CCCCEEEECCCcHHHHHHHHHHHHHhcC--CCE
Confidence 688999999999873211 11122 2344455555544332 1236899999999999999988765322 347
Q ss_pred EEEcCCCChhHHHHHHh-cCCE------------EEEEecCCCC--CCC-CC------HHHHHHHHHhhhccCCceEEEE
Q psy13922 107 VLIPIPQYPLYSASLAE-FNME------------QIGYYLDESK--QWG-LP------ISELERSITEARKHCNPRAIVI 164 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~-~g~~------------~~~v~~~~~~--~~~-~d------~~~L~~~i~~~~~~~~~~~ivi 164 (509)
|+.....|++....... .|.. +..+|..... .|. .| ++.+++.++.. .++.+|++
T Consensus 159 ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---~~vAavIv 235 (459)
T PRK06082 159 VVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE---GGIGAFIA 235 (459)
T ss_pred EEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC---CCEEEEEE
Confidence 88888889887543322 2211 1222211100 011 11 24566666531 25778887
Q ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC
Q psy13922 165 INPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC 244 (509)
Q Consensus 165 ~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~ 244 (509)
....+..+...+++.+++|.++|++||+++|.||++..|...| ....... .++.++ ++ +++|.+ | .
T Consensus 236 EPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG--~~fa~e~--~gv~PD-----iv---~~gKgl-~-g 301 (459)
T PRK06082 236 EAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG--EWFTHQA--YGIEPD-----IL---CIGKGL-G-G 301 (459)
T ss_pred CCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc--hhhHhHh--hCCCCC-----EE---Eecccc-c-C
Confidence 6555655668889999999999999999999999999876554 1222221 122222 44 479999 4 6
Q ss_pred C-CeeEEEeeecCCHHHHHHH
Q psy13922 245 G-LRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 245 G-lr~G~v~~~~~~~~~~~~l 264 (509)
| +++|.++ .++++.+.+
T Consensus 302 G~~P~~av~---~~~~i~~~~ 319 (459)
T PRK06082 302 GLVPIAAMI---TKDKYNTAA 319 (459)
T ss_pred CCCcceEEE---EcHHHHhhc
Confidence 7 5999998 577766543
No 304
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.63 E-value=1.8e-13 Score=153.57 Aligned_cols=192 Identities=15% Similarity=0.175 Sum_probs=139.2
Q ss_pred CcccCCCC---cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHH----HHHHHHHHHhhcC-CCCCCCeEEEcCCCChh
Q psy13922 45 SVGSYTDS---PGIEIIRRHVAQYISRRDGQPADWQDVILSAGAS----DGIKSVLKLLIED-VDGKKPGVLIPIPQYPL 116 (509)
Q Consensus 45 ~~~~Y~~~---~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~----~al~~~~~~l~~~-gd~~~~~Vlv~~p~y~~ 116 (509)
.++-|.|. +|..++...+.+++.+..| .++|.++++++ ++++++++.+.++ ||.+++.|+++...|..
T Consensus 553 ~~hp~~p~~~~~g~~~~~~~~r~~la~i~g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~s 628 (993)
T PLN02414 553 NIHPFAPVDQAQGYQEMFEDLGDLLCEITG----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGT 628 (993)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCcc
Confidence 34445553 4666555555555555445 28999999999 9999999999876 77677789999999999
Q ss_pred HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 117 YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 117 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
....+...|++++.++.++++ .+|++.|++.++++.+ ++++|++++|+|-+|...+ +++|+++|+++|+++++
T Consensus 629 n~a~a~~~G~~vv~v~~d~~G--~vDle~L~~~i~~~~~--~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~v 701 (993)
T PLN02414 629 NPASAAMCGMKIVVVGTDAKG--NINIEELRKAAEAHKD--NLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYM 701 (993)
T ss_pred CHHHHHHCCCEEEEeccCCCC--CcCHHHHHHHHhccCC--CeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEE
Confidence 988888899999999997654 7899999999985211 6899999999999999855 99999999999999999
Q ss_pred cccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC---CCeeEEEeeecCCHHHHHHH
Q psy13922 197 DEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC---GLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 197 Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~---Glr~G~v~~~~~~~~~~~~l 264 (509)
|.++..-... ..... +++ .+++ .+|.+|+|.|.. |=.+|.+. ..+.+...+
T Consensus 702 DgAq~~a~~~----l~~p~----~~G-----aD~~-~~s~HK~f~~P~G~GGPg~G~l~---~~~~L~p~l 755 (993)
T PLN02414 702 DGANMNAQVG----LTSPG----FIG-----ADVC-HLNLHKTFCIPHGGGGPGMGPIG---VKKHLAPFL 755 (993)
T ss_pred EecCHHhccC----cCCcc----ccC-----CCEE-EecCCccCCcCcccCCCCeeeEE---EchhhcccC
Confidence 9998542211 11111 121 2255 448899774322 22377776 455544443
No 305
>PRK07480 putative aminotransferase; Validated
Probab=99.63 E-value=6.4e-14 Score=147.66 Aligned_cols=215 Identities=14% Similarity=0.123 Sum_probs=130.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+....... + ....+.+..+++.+.+..+ -..+.+++++++++|++.+++..+.- |..
T Consensus 68 ~p~v~~Ai~~q~~~~~~~~~~-~---~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~ 141 (456)
T PRK07480 68 RKELADAAARQMRELPYYNTF-F---KTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKP 141 (456)
T ss_pred CHHHHHHHHHHHHhcCCcccc-c---ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 688999999999873211110 1 1113344455555544322 12358999999999999999887542 322
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CCE------------EEEEecCCC--CCCCCC--------HHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NME------------QIGYYLDES--KQWGLP--------ISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~~------------~~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~~~~ 159 (509)
.+..|+...-+|++........ |.. +..++.... ..+..+ ++.+++.+.... ..++
T Consensus 142 ~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~v 220 (456)
T PRK07480 142 QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELG-ADNV 220 (456)
T ss_pred CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcC-CCcE
Confidence 3457888888999865433222 111 111111000 000011 245555443211 1267
Q ss_pred eEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 160 RAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 160 ~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
.+|++...+.-.|. ..+++.+++|.++|++||+++|.||++..|...+ ....... .++.++ + -+++|
T Consensus 221 AAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG--~~~a~~~--~gv~PD-----i---v~~gK 288 (456)
T PRK07480 221 AAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTG--EWFGSQH--FGIKPD-----L---MTIAK 288 (456)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc--chhhhhh--cCCCCC-----e---eeeeh
Confidence 88888656665676 6788899999999999999999999999886554 2222222 122222 3 36699
Q ss_pred ccCCCCCC-eeEEEeeecCCHHHHHHHH
Q psy13922 239 GYMGECGL-RGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 239 ~~~G~~Gl-r~G~v~~~~~~~~~~~~l~ 265 (509)
.+ | .|+ ++|.++ .++++++.+.
T Consensus 289 ~l-~-gG~~Pi~av~---~~~~i~~~~~ 311 (456)
T PRK07480 289 GL-T-SGYIPMGAVG---VGDRVAEVLI 311 (456)
T ss_pred hh-c-cCCccceEEE---EcHHHHHHHh
Confidence 99 4 685 899998 6889988873
No 306
>PRK07036 hypothetical protein; Provisional
Probab=99.63 E-value=1.5e-13 Score=145.23 Aligned_cols=216 Identities=14% Similarity=0.122 Sum_probs=133.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.... ....+.. ...+.+..+++.+.+... -..+.+++++++++|++.+++..+.- |..
T Consensus 69 ~p~v~~Ai~~q~~~~~--~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t 142 (466)
T PRK07036 69 REEMADAIADQARRLP--YYTPFGD--MTNAPAAELAAKLAELAP--GDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRP 142 (466)
T ss_pred CHHHHHHHHHHHHhCc--ccccccc--cCCHHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCC
Confidence 6889999999988721 1111210 113345556655544322 12358999999999999999886432 212
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCCC--CCCCCC--------HHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDES--KQWGLP--------ISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~~~~ 159 (509)
.+.+|+...-+|++....+..... .+..++.... ..++.+ ++.+++.+... ...++
T Consensus 143 ~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~i 221 (466)
T PRK07036 143 AKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL-GADNI 221 (466)
T ss_pred CccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHc-CCCce
Confidence 345899989999987644433211 1222222110 011111 23455555431 11268
Q ss_pred eEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 160 RAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 160 ~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
.+|++...+.-.|. ..+++.+++|.++|++||+++|.||++..|...+ ........ ..+.++ + -+++|
T Consensus 222 Aavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG--~~~~~~~~-~gv~PD-----i---vt~gK 290 (466)
T PRK07036 222 AAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG--HFFASEAV-FGIQPD-----I---ITFAK 290 (466)
T ss_pred EEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCc--hhhhhhhh-cCCCCC-----E---EEEcc
Confidence 88888766666676 6788999999999999999999999999886553 12222111 122222 3 36699
Q ss_pred ccCCCCC-CeeEEEeeecCCHHHHHHHH
Q psy13922 239 GYMGECG-LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 239 ~~~G~~G-lr~G~v~~~~~~~~~~~~l~ 265 (509)
.+ | .| +++|.++ .++++++.+.
T Consensus 291 ~l-~-gG~~Pi~av~---~~~~i~~~~~ 313 (466)
T PRK07036 291 GL-T-SGYQPLGAVI---ISERLLDVIS 313 (466)
T ss_pred cc-c-cCccccEEEE---EcHHHHHHHh
Confidence 99 4 78 5999998 7899998875
No 307
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.63 E-value=2e-13 Score=140.46 Aligned_cols=166 Identities=15% Similarity=0.132 Sum_probs=117.6
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH----HHHHhcCCEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS----ASLAEFNMEQIG 130 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~----~~~~~~g~~~~~ 130 (509)
..+|.+.++++.+ .+..+++++++.|+.+++.++.++|| +|+++.+.|.+.. ..+...|++++.
T Consensus 66 ~~~lE~~la~leg--------~~~av~~sSG~aAi~~al~all~~GD----~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~f 133 (384)
T PRK06434 66 VQAFEEKYAVLEN--------AEHALSFSSGMGAITSAILSLIKKGK----RILSISDLYGQTFYFFNKVLKTLGIHVDY 133 (384)
T ss_pred HHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCC----EEEEecCccchHHHHHHHHHHhcCcEEEE
Confidence 3667788888773 35678888888999999999999998 9999887655543 566778999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCc
Q psy13922 131 YYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSK 210 (509)
Q Consensus 131 v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~ 210 (509)
++.++...+.++ .. ++++|++..|+||++.+.+ +++|+++|++++ +++|.++.... .
T Consensus 134 vd~~~~~~~~l~---------~~----~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~-----~ 190 (384)
T PRK06434 134 IDTDRLNSLDFD---------PS----NYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPY-----N 190 (384)
T ss_pred ECCCChhheeec---------CC----CeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCcc-----c
Confidence 987643223222 21 6899999999999998855 999999999998 45699974321 1
Q ss_pred cccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhh
Q psy13922 211 FYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSI 268 (509)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~ 268 (509)
..++. .+ . -++++|.+|.++|..+.-.|.++ +.++++.++++...
T Consensus 191 ~~pl~-----~g-----a-Divv~S~tK~i~G~~d~~gG~vv--~~~~~~~~~~~~~~ 235 (384)
T PRK06434 191 QNPLD-----LG-----A-DVVIHSATKYISGHSDVVMGVAG--TNNKSIFNNLVERR 235 (384)
T ss_pred CCchh-----cC-----C-CEEEeecccccCCCCCceEEEEe--cCcHHHHHHHHHHH
Confidence 12221 11 1 35566899999643335566664 36777777776544
No 308
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.63 E-value=1.3e-13 Score=141.20 Aligned_cols=337 Identities=15% Similarity=0.103 Sum_probs=196.3
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchH---HHHHHHHHHHhhhcCCCCCCCcEEE-eCCHHHHHHHHHHHhh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIE---IIRRHVAQYISRRDGQPADWQDVIL-SAGASDGIKSVLKLLI 97 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~---~lr~~va~~l~~~~g~~~~~~~i~~-t~G~~~al~~~~~~l~ 97 (509)
|+..+|+.|++++.+.+.+......+.+....-.+ ++.+.+.+.+.+.++.+ +..+|++ +++++.+++.++..+.
T Consensus 10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl~ 88 (360)
T PRK05355 10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNLL 88 (360)
T ss_pred CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhcC
Confidence 56668999999999888653212222222221112 34444444444444521 2234555 4777899999999999
Q ss_pred cCCCCCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHH-HHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 98 EDVDGKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQWGLPISELER-SITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~-~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
.+|+ ++++..-...+ +.+.++..|.. ..+..++..+ ..+..++++ .+++ ++++|.+++..+.||+.
T Consensus 89 ~~g~----~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~~~~~~~~~~~l~~-----~~~~V~~th~eTstGv~ 157 (360)
T PRK05355 89 GGGK----KADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-FTYIPPLDEWQLSD-----DAAYVHYTSNETIDGTE 157 (360)
T ss_pred CCCC----eEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-CCCCCChhhccCCC-----CCCEEEEccCCCcceEe
Confidence 9887 66655444443 46778888865 4444442112 334444444 5654 68999999999999999
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
.+ ++.+| +|+++|+|.+.+... ....+..+ +++ +.|..|.+ |++|+ |.+.
T Consensus 158 ~~--~i~~i------~g~l~vVDavss~g~-----~~idv~~~-----------d~~-~~ssqK~l-gP~Gl--g~l~-- 207 (360)
T PRK05355 158 FH--ELPDT------GDVPLVADMSSDILS-----RPIDVSKF-----------GLI-YAGAQKNI-GPAGL--TIVI-- 207 (360)
T ss_pred cC--ccccc------CCCcEEEEcCccccC-----ccCCHHHc-----------cEE-EEeccccc-cCCce--EEEE--
Confidence 84 35555 899999999987733 22333321 244 45779999 88874 5555
Q ss_pred cCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHH
Q psy13922 255 NLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFS 334 (509)
Q Consensus 255 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 334 (509)
.+++..+++.... +... -. .......--.+++......++..+++ |-...
T Consensus 208 -~s~~~l~~~~~~~-----~~~~---~~-------------~~~~~~~~~~~Tp~~~~i~aL~~aL~--------~i~~~ 257 (360)
T PRK05355 208 -VREDLLGRALPSI-----PSML---DY-------------KTHADNDSMYNTPPTFAIYLAGLVFK--------WLKEQ 257 (360)
T ss_pred -ECHHHHhhcccCC-----ChHH---HH-------------HHHHhcCCccCCCcHHHHHHHHHHHH--------HHHHc
Confidence 4777777654310 0000 00 00000000012333335566665544 21111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC---CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 335 REKQSVLDSLKQRAKMVADTFNSIEGMSCNPV---QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 335 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
..++.+.++.+++.+++.+.|++++.+....+ ..+..+.+.++ .. ....+ ....+.++||.+.+
T Consensus 258 gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~--~~----------~~~~~-~~~~~~~~Gi~~~~ 324 (360)
T PRK05355 258 GGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLA--DE----------ELDKK-FLAEAKAAGLVGLK 324 (360)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcC--Ch----------HHHHH-HHHHHHHCCCcccC
Confidence 02788889999999999999999853222211 23233333333 21 01122 23455668888755
Q ss_pred CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHH
Q psy13922 412 GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEK 489 (509)
Q Consensus 412 g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~ 489 (509)
|.. . .+ .||+|+. ++.++
T Consensus 325 ~~~--~------------------------------------------------~g----------~vRiS~~~~nt~ee 344 (360)
T PRK05355 325 GHR--S------------------------------------------------VG----------GMRASIYNAMPLEG 344 (360)
T ss_pred CCC--c------------------------------------------------cC----------cEEEECCCCCCHHH
Confidence 441 1 22 7999988 88999
Q ss_pred HHHHHHHHHHHHHH
Q psy13922 490 LKAMLEKFREFHEE 503 (509)
Q Consensus 490 i~~~~~~l~~~~~~ 503 (509)
|+..++.|++++++
T Consensus 345 i~~l~~~l~~~~~~ 358 (360)
T PRK05355 345 VQALVDFMKEFERR 358 (360)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987754
No 309
>PRK06105 aminotransferase; Provisional
Probab=99.63 E-value=6.5e-14 Score=147.90 Aligned_cols=215 Identities=13% Similarity=0.049 Sum_probs=132.9
Q ss_pred CHHHHHHHHHHHhcccCC-CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CC
Q psy13922 27 PDDVKQRAQAVLDGCRGQ-SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~-~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd 101 (509)
+|.|.+++.+++.+.... ....|. .+.+.++++.+.+... -..+.+++++++++|++.+++..+.. +.
T Consensus 66 ~p~i~~Ai~~q~~~~~~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~SGseAve~AlKlar~~~~~~g~ 138 (460)
T PRK06105 66 EQRLVEAAARQMKKLPFYHTFSHKS-----HGPVIDLAEKLVAMAP--VPMSKVFFTNSGSEANDTVVKLVWYYNNALGR 138 (460)
T ss_pred CHHHHHHHHHHHHhCCCeecccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCC
Confidence 689999999999873211 111121 2334445555543322 12358999999999999999986421 22
Q ss_pred CCCCeEEEcCCCChhHHHHHHhc-CCE------------EEEEecCCCCCCC-----------CCHHHHHHHHHhhhccC
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEF-NME------------QIGYYLDESKQWG-----------LPISELERSITEARKHC 157 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~-g~~------------~~~v~~~~~~~~~-----------~d~~~L~~~i~~~~~~~ 157 (509)
..+..|+...-.|++........ +.. +..++......+. ...+.+++.+.... ..
T Consensus 139 t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~-~~ 217 (460)
T PRK06105 139 PEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEG-PD 217 (460)
T ss_pred CCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcC-CC
Confidence 23457898888999876443221 111 1111111100000 01356777764321 12
Q ss_pred CceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec
Q psy13922 158 NPRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC 236 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 236 (509)
++.+|++...+.-.|. ..+++.+++|.++|++||+++|.||++..|...| ....... .++.++ +.++
T Consensus 218 ~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG--~~f~~~~--~~v~PD--------i~~~ 285 (460)
T PRK06105 218 TIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTG--NMFGCET--FGIKPD--------ILVM 285 (460)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCc--hhhhHHh--cCCCCC--------eeee
Confidence 6788888656666676 5789999999999999999999999999886554 2222222 122222 3367
Q ss_pred ccccCCCCC-CeeEEEeeecCCHHHHHHHHH
Q psy13922 237 SKGYMGECG-LRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 237 SK~~~G~~G-lr~G~v~~~~~~~~~~~~l~~ 266 (509)
+|.+ | .| +++|.++ .++++++.+..
T Consensus 286 gK~l-g-gG~~P~~av~---~~~~i~~~~~~ 311 (460)
T PRK06105 286 SKQL-S-SSYQPLSAVL---MNEKVYDPIAD 311 (460)
T ss_pred eccc-c-cCcccceEEE---EcHHHHHHHhc
Confidence 9999 4 66 6999998 78899888764
No 310
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.62 E-value=3.3e-14 Score=145.30 Aligned_cols=197 Identities=12% Similarity=0.133 Sum_probs=128.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.+.+++.+++++.... ...|. .....++.+.++++. + .+.+++++++++|++.+++...... .++.
T Consensus 42 ~p~v~~ai~~ql~~~~~~-~~~~~-~~~~~~la~~l~~~~----~----~~~v~~~~SGseA~e~Alklar~~~--gr~~ 109 (364)
T PRK04013 42 HPEWVEEMSEQLEKLVVA-GPMFE-HEEKEEMLEELSKWV----N----YEYVYMGNSGTEAVEAALKFARLYT--GRKE 109 (364)
T ss_pred CHHHHHHHHHHHHhcCCc-cCCcC-CHHHHHHHHHHHhhc----C----CCEEEEeCchHHHHHHHHHHHHHHh--CCCE
Confidence 578889999999873211 11233 222244555555443 2 3589999999999999999886532 1358
Q ss_pred EEEcCCCChhHHHHHHhc-C-------CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC-CCCH
Q psy13922 107 VLIPIPQYPLYSASLAEF-N-------MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ-VLTK 177 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g-------~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~-~~s~ 177 (509)
|+....+|++....+... + .......... -. ..|++.+++.+.+ ++++|++...+...|. ..++
T Consensus 110 Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~-~~-~~d~~~l~~~i~~-----~~aAvivEpi~g~gG~~~~~~ 182 (364)
T PRK04013 110 IIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKH-IP-FNDVEAAKEAITK-----ETAAVIFEPIQGEGGIVPAKE 182 (364)
T ss_pred EEEECCccccCchhhccCCCCcccccCCCCCCCCcEE-ec-CCCHHHHHHHhcC-----CcEEEEEcCCcCCCCCcCCCH
Confidence 999999999876444331 1 1100000000 01 1267888888865 7899988766666665 5678
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+.+++|.++|++||+++|.||++..+ ..| .+..... .++.++ ++ +++|.+ | .|+++|.++ .+
T Consensus 183 ~yl~~lr~lc~~~gillI~DEv~tG~-RtG--~~~a~~~--~gv~PD-----iv---~~gK~l-g-gG~P~~a~~---~~ 244 (364)
T PRK04013 183 EFVKTLRDLTEDVGALLIADEVQSGL-RTG--KFLAIEH--YKVEPD-----IV---TMGKGI-G-NGVPVSLTL---TN 244 (364)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhcC-CCC--chhHHHh--cCCCCC-----EE---Eecccc-c-CCceeEEEE---ec
Confidence 89999999999999999999999988 543 2222221 122222 33 669999 5 789999987 45
Q ss_pred HHH
Q psy13922 258 PGV 260 (509)
Q Consensus 258 ~~~ 260 (509)
.++
T Consensus 245 ~~~ 247 (364)
T PRK04013 245 FDV 247 (364)
T ss_pred ccc
Confidence 454
No 311
>PLN03032 serine decarboxylase; Provisional
Probab=99.62 E-value=5.1e-13 Score=136.56 Aligned_cols=220 Identities=13% Similarity=0.055 Sum_probs=148.5
Q ss_pred CCCCCC---CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcE--EEeCCHHHHHHHHHH
Q psy13922 20 LFDDPR---FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDV--ILSAGASDGIKSVLK 94 (509)
Q Consensus 20 ~~~~~~---~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i--~~t~G~~~al~~~~~ 94 (509)
.+|-|. |-..+++++...+....++....++......++.+.+.+++.+.+| .+++++ ++|+|+|+++...+.
T Consensus 26 ~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~ 103 (374)
T PLN03032 26 HFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGIL 103 (374)
T ss_pred ccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHH
Confidence 444443 5556788887777653222222122112336666777777766666 456666 999999999998888
Q ss_pred HhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 95 LLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 95 ~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
..++... +..|+++.-.|.+...+++.+|.++..||.+++ ..+|++.|++.+++.. .++.+|+++..+|++|.+
T Consensus 104 ~ar~~~~--~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~--g~id~~~L~~~i~~~~--~~~~lvv~tagtt~tG~i 177 (374)
T PLN03032 104 VGREVFP--DGILYASRESHYSVFKAARMYRMEAVKVPTLPS--GEIDYDDLERALAKNR--DKPAILNVNIGTTVKGAV 177 (374)
T ss_pred HHHHhCC--CcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCC--CcCcHHHHHHHHHHcC--CCCEEEEEEecCcCCccC
Confidence 7653211 127999999999999999999999999998765 3899999999998621 136778888899999999
Q ss_pred CCHHHHHHHHHHHHHCC-----cEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeE
Q psy13922 175 LTKENIQDIIKFAHREK-----LFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGG 249 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~-----i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G 249 (509)
-| +++|+++|+++| +++++|.+|+.+...-... .+...+. ...+.+++ |.+|.. | .-..+|
T Consensus 178 dp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~-~~~~~~~-------~~vDSis~-s~HK~~-g-~P~g~G 243 (374)
T PLN03032 178 DD---LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSR-APEVTFR-------KPIGSVSV-SGHKFL-G-CPMPCG 243 (374)
T ss_pred CC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCC-CcccCCC-------cCCcEEEE-Cccccc-C-CCcCeE
Confidence 66 899999999996 5899999997753210000 0000100 12447777 889998 6 334578
Q ss_pred EEeeecCCHHHHHHH
Q psy13922 250 YSEVINLDPGVKAML 264 (509)
Q Consensus 250 ~v~~~~~~~~~~~~l 264 (509)
.+++ . .+..+.+
T Consensus 244 ~ll~--r-~~~~~~~ 255 (374)
T PLN03032 244 VALT--R-KKHVKAL 255 (374)
T ss_pred EEEE--E-chhhHhh
Confidence 7774 3 3444444
No 312
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.62 E-value=2.4e-13 Score=143.48 Aligned_cols=230 Identities=13% Similarity=0.095 Sum_probs=133.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-CcEEEe-CCHHHHHHHHHHHhhcCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QDVILS-AGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~t-~G~~~al~~~~~~l~~~gd~~~ 104 (509)
+|.|.+++.+++.+........|. .+.+..+++.+.......... +.++++ ++++||...+++..+.... +
T Consensus 81 ~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tg--r 153 (464)
T PRK06938 81 HPVVIEAIQQVLADELPLHTLDLT-----TPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATG--R 153 (464)
T ss_pred CHHHHHHHHHHHHhhhcccccccC-----CHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhC--C
Confidence 688999999998751111111121 233444444443322211111 356665 6889999999998765422 4
Q ss_pred CeEEEcCCCChhHHHHHHhc-CC------------EEEEEecCCC--CCCC--------CCHHHHHHHHHhhhcc-CCce
Q psy13922 105 PGVLIPIPQYPLYSASLAEF-NM------------EQIGYYLDES--KQWG--------LPISELERSITEARKH-CNPR 160 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~--~~~~--------~d~~~L~~~i~~~~~~-~~~~ 160 (509)
+.|+...-+|++....+... |. .+..+|.... ..+. .+++.+++.+.+...+ .++.
T Consensus 154 ~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iA 233 (464)
T PRK06938 154 STVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPA 233 (464)
T ss_pred CeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceE
Confidence 58999899999876544332 10 1222222111 0011 1256677777642111 2578
Q ss_pred EEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 161 AIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 161 ~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
+|++...+.-.|. ..+++.++++.++|++||+++|.||++.+|...| ....... .++.++ ++ +++|.
T Consensus 234 AvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG--~~~a~e~--~gv~PD-----iv---~~gKg 301 (464)
T PRK06938 234 AVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG--KMFAFEH--AGIIPD-----VV---VLSKA 301 (464)
T ss_pred EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--HHHHHHh--cCCCCC-----EE---Eeecc
Confidence 8888655555576 5679999999999999999999999999986554 2222221 223332 44 56999
Q ss_pred cCCCCCCeeEEEeeecCCHHHHHHHHHh-hhcccCcchhhhhc
Q psy13922 240 YMGECGLRGGYSEVINLDPGVKAMLHKS-ISAMLCPTVLALVS 281 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~ 281 (509)
+ | .|+++|.++ .++++ +.+... ...+.+.+.+++++
T Consensus 302 l-g-gG~PlsAv~---~~~~~-~~~~~~~~~~T~~gnpla~Aa 338 (464)
T PRK06938 302 I-G-GSLPLAVVV---YREWL-DTWQPGAHAGTFRGNQMAMAA 338 (464)
T ss_pred c-c-CCCceEEEe---ehhHh-hccCCCCCCCCCCcCHHHHHH
Confidence 9 5 799999998 55554 444221 11233445553333
No 313
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.62 E-value=3.9e-13 Score=125.59 Aligned_cols=310 Identities=13% Similarity=0.181 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCC
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDE 135 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 135 (509)
..+.+.+++|++ -+.+-+|+|+.++-..++.+++++|| .|++....|....-+++++|.++..||...
T Consensus 64 ~~F~~dlaeFlg--------~D~~R~t~GARe~KfavMhal~~~gd----~vV~D~~aHYttyvAAEragl~v~eVp~tg 131 (382)
T COG1103 64 KDFLEDLAEFLG--------MDEVRVTAGAREAKFAVMHALCKEGD----WVVVDSLAHYTTYVAAERAGLNVAEVPNTG 131 (382)
T ss_pred HHHHHHHHHHhC--------CceeeecccchhhHHHHHHHhccCCC----EEEEcCcchHHHHHHHHhcCCeEEecCCCC
Confidence 567788888883 56899999999999999999999999 999999999988889999999999999877
Q ss_pred CCCCCCCHHHHHHHHHhhhcc--CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcccc
Q psy13922 136 SKQWGLPISELERSITEARKH--CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYS 213 (509)
Q Consensus 136 ~~~~~~d~~~L~~~i~~~~~~--~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~ 213 (509)
...|.++++...+.|++..+. ..+.+.++++|...-|.. .+-+.++++|++++++++...+|.-..+ ..+
T Consensus 132 ~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dakkva~ic~e~gvPlllN~AYt~Grm-----pvs 203 (382)
T COG1103 132 YPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAKKVAKICREYGVPLLLNCAYTVGRM-----PVS 203 (382)
T ss_pred CCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhHHHHHHHHHcCCceEeecceeeccc-----ccc
Confidence 778899999999999876554 357777889888777877 4589999999999999999999986332 333
Q ss_pred HHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhc-c--cCcchhhhhccccccCCCC
Q psy13922 214 FKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISA-M--LCPTVLALVSLPQLFDDPR 290 (509)
Q Consensus 214 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~-~--~~~~~~~~~~~~~~~~~~~ 290 (509)
..++.. ++| ++|-+|+++ +.-++|.+. -..++.+.+-+.... + -.+..+
T Consensus 204 ~ke~g~---------DFi-VgSGHKsmA--As~PiGvl~---~~eE~ae~V~r~Sg~~~~~KEvell------------- 255 (382)
T COG1103 204 GKEIGA---------DFI-VGSGHKSMA--ASAPIGVLA---MSEEWAEIVLRRSGRAFPKKEVELL------------- 255 (382)
T ss_pred ccccCC---------CEE-EecCccchh--ccCCeeEEe---ehhHHHHHHHhhcccccccceeeee-------------
Confidence 333221 244 679999996 566999997 588888877554321 1 112222
Q ss_pred CchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec--cCCc
Q psy13922 291 FPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN--PVQG 368 (509)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~ 368 (509)
+|+...+....+.+. |....++..+.-+.+ +....+.+.++++.|+.-. .|..
T Consensus 256 --------------GCT~rGapivTlmAS----------fP~V~eRVkrWdeEv-~kaR~fv~elEkigg~~qlG~rPk~ 310 (382)
T COG1103 256 --------------GCTVRGAPIVTLMAS----------FPHVVERVKRWDEEV-EKARWFVAELEKIGGVKQLGERPKN 310 (382)
T ss_pred --------------cccccCchHHHHHhc----------CHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHHHhCCCCcc
Confidence 222222222222222 344444444333333 3456778888888556543 3444
Q ss_pred eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCC
Q psy13922 369 AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCP 448 (509)
Q Consensus 369 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 448 (509)
.-.+. |..|. +.++.+..... --|+.+-|+++||.-.-
T Consensus 311 HdLm~--Fetp~--f~eIakk~~r~-gyFlY~ELK~RgI~GI~------------------------------------- 348 (382)
T COG1103 311 HDLMK--FETPV--FHEIAKKHKRK-GYFLYEELKKRGIHGIQ------------------------------------- 348 (382)
T ss_pred cceee--ecCch--HHHHHHhCcCC-ceeeHHHHHhcCccccc-------------------------------------
Confidence 44444 33332 22222222111 11245667777774220
Q ss_pred chhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHHH
Q psy13922 449 SVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~ 504 (509)
+|. +.+|.+|.. .+.++++-.++.++++++++
T Consensus 349 -----------------~G~-------Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 349 -----------------PGQ-------TKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred -----------------cCc-------eeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 221 338999987 89999999999999998764
No 314
>PRK06062 hypothetical protein; Provisional
Probab=99.62 E-value=2.3e-13 Score=143.44 Aligned_cols=211 Identities=17% Similarity=0.210 Sum_probs=133.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+..... ..|. .+.+..+++.+.+... -..+.|++++++++|.+.+++..+.... |.+
T Consensus 71 ~p~v~~Ai~~q~~~~~~~~-~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAve~AlklAr~~tg--r~~ 140 (451)
T PRK06062 71 HPKVVAAIQEQAARLCTVA-PAHA-----NDARSEAARLIAERAP--GDLSKVFFTNGGADANEHAVRMARLHTG--RPK 140 (451)
T ss_pred CHHHHHHHHHHHHhcCCcC-CccC-----CHHHHHHHHHHHHhCC--CCCCEEEEcCChHHHHHHHHHHHHHhhC--Cce
Confidence 5889999999998722111 1122 3344555555544322 1236899999999999999998765432 458
Q ss_pred EEEcCCCChhHHHHHHhc-CCE-----------EEEEecCCC--CCCC--CC-------HHHHHHHHHhhhccCCceEEE
Q psy13922 107 VLIPIPQYPLYSASLAEF-NME-----------QIGYYLDES--KQWG--LP-------ISELERSITEARKHCNPRAIV 163 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~~-----------~~~v~~~~~--~~~~--~d-------~~~L~~~i~~~~~~~~~~~iv 163 (509)
|+...-.|++....+... +.. +..++.... ..|. -| ++.+++.++... ..++.+|+
T Consensus 141 ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-~~~iAavi 219 (451)
T PRK06062 141 VLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEG-PSTIAAIL 219 (451)
T ss_pred EEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcC-CCceEEEE
Confidence 999999999876544332 111 111211110 0110 12 567777775321 12678888
Q ss_pred EeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 164 IINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 164 i~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
+.....-.|. ..+++.+++|.++|++||+++|.||++..|...+ ....... ..+.++ +.+++|.+ |
T Consensus 220 iEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG--~~~a~~~--~gv~PD--------i~t~gK~l-g 286 (451)
T PRK06062 220 LESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG--KWFAIEH--FGVVPD--------LITFAKGV-N 286 (451)
T ss_pred EccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCc--HHHHHHh--cCCCCC--------eeeechhh-h
Confidence 8655555676 4688999999999999999999999999875443 1111111 122222 33679999 4
Q ss_pred CCCC-eeEEEeeecCCHHHHHHHH
Q psy13922 243 ECGL-RGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 243 ~~Gl-r~G~v~~~~~~~~~~~~l~ 265 (509)
.|+ ++|.++ .++++++.+.
T Consensus 287 -gG~~Pigav~---~~~~i~~~~~ 306 (451)
T PRK06062 287 -SGYVPLGGVA---ISEAIAATFA 306 (451)
T ss_pred -cCCcCcEEEE---EcHHHHHHhc
Confidence 684 999998 6788988875
No 315
>PRK07481 hypothetical protein; Provisional
Probab=99.61 E-value=4e-13 Score=141.55 Aligned_cols=217 Identities=15% Similarity=0.104 Sum_probs=131.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+... ...+.. ...+.+..+++.+.+..+. -..+.++++++++||++.+++..+.- |.+
T Consensus 60 ~p~v~~Ai~~ql~~~~~--~~~~~~--~~~~~~~~lae~L~~~~~~-~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~ 134 (449)
T PRK07481 60 REEVKEAIVRQLDELEY--YSTFDG--TTHPRAIELSYELIDMFAP-EGMRRVFFSSGGSDSVETALKLARQYWKVRGQP 134 (449)
T ss_pred CHHHHHHHHHHHHhccc--eecccc--cCCHHHHHHHHHHHHhcCC-CCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCC
Confidence 58899999999987221 111100 0123445555555443221 12358999999999999999987542 222
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCCC--CCCC-CCHHHH--------HHHHHhhhccCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDES--KQWG-LPISEL--------ERSITEARKHCN 158 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~--~~~~-~d~~~L--------~~~i~~~~~~~~ 158 (509)
.+.+|+...-+|++....+...+. .+..++.... ..|. .|.+.+ ++.+.... ..+
T Consensus 135 ~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~-~~~ 213 (449)
T PRK07481 135 ERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQG-PDT 213 (449)
T ss_pred CCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcC-CCc
Confidence 345899999999987643332211 1122221100 0111 144443 33333111 126
Q ss_pred ceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 159 PRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
+.+|++...+.-.|. ..+++.+++|.++|++||+++|.||++.+|...+. ...... .++.++ ++ +++
T Consensus 214 iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~--~~a~~~--~gv~PD-----iv---~~g 281 (449)
T PRK07481 214 IAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGS--WFGSRG--WGVKPD-----IM---CLA 281 (449)
T ss_pred EEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCch--hhHhhh--cCCCCC-----EE---EEe
Confidence 888888766666676 67889999999999999999999999999865541 212111 122222 44 569
Q ss_pred cccCCCCC-CeeEEEeeecCCHHHHHHHHH
Q psy13922 238 KGYMGECG-LRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 238 K~~~G~~G-lr~G~v~~~~~~~~~~~~l~~ 266 (509)
|.+ | .| +++|.++ .++++++.+..
T Consensus 282 Kgl-~-gG~~Pi~av~---~~~~i~~~~~~ 306 (449)
T PRK07481 282 KGI-T-SGYVPLGATM---VNARIADAFEA 306 (449)
T ss_pred ecc-c-CCCcCceEEE---EcHHHHHHHhc
Confidence 999 4 68 5999998 68889888753
No 316
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=1.3e-12 Score=136.59 Aligned_cols=154 Identities=18% Similarity=0.201 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH----HHHHhcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS----ASLAEFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~----~~~~~~g~~~~~v 131 (509)
..+++.+++++ | ....|++++|+ +|+.+++..+.++|| +||++...|.+.. ..++..|+++..+
T Consensus 72 ~~le~~la~l~----g---~~~~v~fsSG~-~Ai~~al~~ll~~Gd----~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~v 139 (437)
T PRK05613 72 EALENRIASLE----G---GVHAVAFASGQ-AAETAAILNLAGAGD----HIVTSPRLYGGTETLFLVTLNRLGIEVTFV 139 (437)
T ss_pred HHHHHHHHHHh----C---CCeEEEeCCHH-HHHHHHHHHhcCCCC----EEEECCCccHHHHHHHHHHHHhcCeEEEEE
Confidence 66778888777 3 12345555555 888888888888888 9999999998864 4457789999998
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
+ ++. |++.+++.+++ ++++|++.++.||+|.+.+ +++|+++|+++|+++|+|.++..... .
T Consensus 140 d-~~~-----d~e~l~~~l~~-----~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~-----~ 200 (437)
T PRK05613 140 E-NPD-----DPESWQAAVQP-----NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL-----V 200 (437)
T ss_pred C-CCC-----CHHHHHHhCCc-----cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc-----c
Confidence 7 322 78999999887 7999999999999998877 99999999999999999999865221 1
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
.+. . .+. -++++|++|.++ -.|..+|.++
T Consensus 201 ~p~-~----~Ga------Divv~S~~K~l~-G~gd~~gG~v 229 (437)
T PRK05613 201 RPL-E----LGA------DVVVASLTKFYT-GNGSGLGGVL 229 (437)
T ss_pred ChH-H----hCC------CEEEeeccceec-CCCcceeEEE
Confidence 121 1 121 244669999994 3565555554
No 317
>KOG1359|consensus
Probab=99.61 E-value=2.2e-13 Score=128.56 Aligned_cols=214 Identities=17% Similarity=0.188 Sum_probs=150.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
.|+++++-.++++....+..+ -.--.|.....+.+...+.++++ .|+.++.+.+..|...++.++..|.| .
T Consensus 83 hPeii~a~~~aleeyGaGlss-vrfIcGtq~iHk~LE~kiAqfh~----rED~ilypscfdANag~feail~ped----A 153 (417)
T KOG1359|consen 83 HPEIINAGQKALEEYGAGLSS-VRFICGTQDIHKLLESKIAQFHG----REDTILYPSCFDANAGAFEAILTPED----A 153 (417)
T ss_pred ChHHHHHHHHHHHHhCCCccc-eeEEecchHHHHHHHHHHHHHhC----CCceEEeccccccchHHHHHhcChhh----h
Confidence 578999999999984433222 22234666655555555555544 56777788888999999999999887 8
Q ss_pred EEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Q psy13922 107 VLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i 186 (509)
|+-...+|.+..+.++.+. . . -.+|+-.++..+.+..+. +.++|+....-...|.+.| +++|..+
T Consensus 154 vfSDeLNhASIIdGirLck----r-----y--~h~dv~~l~~~l~~a~k~-r~klv~TDg~FSMDGdiaP---l~ei~~L 218 (417)
T KOG1359|consen 154 VFSDELNHASIIDGIRLCK----R-----Y--RHVDVFDLEHCLISACKM-RLKLVVTDGVFSMDGDIAP---LEEISQL 218 (417)
T ss_pred hhccccccchhhhhhHHHh----h-----h--ccchhHHHHHHHHHhhhh-eEEEEEecceeccCCCccc---HHHHHHH
Confidence 8888889988887766554 1 1 145677777666543332 6788887788888999988 8889999
Q ss_pred HHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 187 AHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 187 a~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
+++||.++++||++..+.++.. .....+.+.-++. + .+..++++|.+ | |.-.||.. ++..+++.+++
T Consensus 219 a~kYgaLlfiDecHaTgf~G~t--GrGt~E~~~vm~~----v-diinsTLgKAl-G--ga~GGytt---gp~~li~llrq 285 (417)
T KOG1359|consen 219 AKKYGALLFIDECHATGFFGET--GRGTAEEFGVMGD----V-DIINSTLGKAL-G--GASGGYTT---GPKPLISLLRQ 285 (417)
T ss_pred HHhcCcEEEEeecccceeecCC--CCChHHHhCCCCc----c-eehhhhhhhhh-c--CCCCCCcc---CChhHHHHHHh
Confidence 9999999999999998887542 3334444332222 2 35567999998 4 55669997 89999999887
Q ss_pred hhhcccCcchh
Q psy13922 267 SISAMLCPTVL 277 (509)
Q Consensus 267 ~~~~~~~~~~~ 277 (509)
-...+..++++
T Consensus 286 r~RpylFSnsl 296 (417)
T KOG1359|consen 286 RSRPYLFSNSL 296 (417)
T ss_pred cCCceeecCCC
Confidence 55544444433
No 318
>KOG1360|consensus
Probab=99.61 E-value=4.1e-13 Score=131.46 Aligned_cols=297 Identities=12% Similarity=0.116 Sum_probs=194.9
Q ss_pred CHHHHHHHHHHHhcccCC---CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQ---SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~---~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd 101 (509)
.|.|++++++.+...+.+ +-+--+.+.-...|.+.+|++.. .+..++.+++.-|....+-.|.+ ||-
T Consensus 187 Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--------K~aALlFsSCfVANDstLftLak~lpgc 258 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--------KEAALLFSSCFVANDSTLFTLAKKLPGC 258 (570)
T ss_pred ChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--------CcceeeeeeeeeccchHHHHHHHHCCCc
Confidence 478999999999985422 22222334444568888888762 45555556666666666656543 554
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.|.-..-+|.+....++..+++=..+.. -|++.|++++++..+. .+|+|-+...+..+|.+-| ++
T Consensus 259 ----ei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~s-vPKivAFEtVhSM~Gavcp---le 323 (570)
T KOG1360|consen 259 ----EIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPKS-VPKIVAFETVHSMDGAVCP---LE 323 (570)
T ss_pred ----EEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCCC-CCceEEEeeeeccCCCcCC---HH
Confidence 6666677888888888877765444432 2899999999875332 6788889999999999988 99
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|++++++||.+-++||++....|++... .+.+- +..-..++ |..+++.|.| |.-| ||++ +...++
T Consensus 324 elcDvah~yGAiTFlDEVHAVGlYG~rGa--Gvger----dGvm~kvD-iIsGTLgKaf-GcVG---GYIA---at~~Lv 389 (570)
T KOG1360|consen 324 ELCDVAHKYGAITFLDEVHAVGLYGPRGA--GVGER----DGVMHKVD-IISGTLGKAF-GCVG---GYIA---ATRKLV 389 (570)
T ss_pred HHHHHHHHhCceeeeehhhhhccccCCCC--Ccccc----CCcchhhh-hcccchhhhc-cccc---ceeh---hhhhHH
Confidence 99999999999999999998887764211 11110 00001222 4478999999 7655 9998 899999
Q ss_pred HHHHHhhhccc----CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 262 AMLHKSISAML----CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 262 ~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
+.++.+..++. -|++.-.. +..+...+.. .+-
T Consensus 390 DmiRSyAaGFIFTTSLPP~vl~G-------------------------------AleaVr~lk~-------------~eg 425 (570)
T KOG1360|consen 390 DMIRSYAAGFIFTTSLPPMVLAG-------------------------------ALEAVRILKS-------------EEG 425 (570)
T ss_pred HHHHHhcCceEEecCCChHHHHh-------------------------------HHHHHHHHhh-------------hhh
Confidence 99998876432 23332000 2222222211 113
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+.+|..-+++..++.+.|.++ |+.+.+..+.+.-. .+..+. -+.+....++.++||++-.-.+...
T Consensus 426 ~~lR~~hqrnv~~~kq~l~~~-GiPVi~~pSHIiPv-~vgda~------------l~~~~sd~Li~~h~iYvQaINyPTV 491 (570)
T KOG1360|consen 426 RVLRRQHQRNVKYVKQLLMEL-GIPVIPNPSHIIPV-RVGDAA------------LAKQASDILISKHNIYVQAINYPTV 491 (570)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCcccCCCcceeee-eccCHH------------HHHHHHHHHHHhcCeEEEeccCCcc
Confidence 566777778888899999988 88887655554332 232111 1233356788999999987666555
Q ss_pred C
Q psy13922 418 V 418 (509)
Q Consensus 418 ~ 418 (509)
.
T Consensus 492 ~ 492 (570)
T KOG1360|consen 492 A 492 (570)
T ss_pred c
Confidence 3
No 319
>PRK12403 putative aminotransferase; Provisional
Probab=99.60 E-value=1e-12 Score=138.85 Aligned_cols=215 Identities=13% Similarity=0.072 Sum_probs=128.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++++.... +.+ ..+..+....+++.+.+..+ -..+.+++++++++|+..+++..+.- |.+
T Consensus 72 hp~v~~A~~~q~~~~~~~--~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~ 145 (460)
T PRK12403 72 RKDLAAAAARQMEQLPYY--NMF--FHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKP 145 (460)
T ss_pred CHHHHHHHHHHHHhCCCe--ecc--cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCC
Confidence 488999999999883211 111 01123344444544443322 12368999999999999999988632 321
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CCE-----------EEEEecCC--CCCCCCC--------HHHHHHHHHhhhccCCce
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NME-----------QIGYYLDE--SKQWGLP--------ISELERSITEARKHCNPR 160 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~~-----------~~~v~~~~--~~~~~~d--------~~~L~~~i~~~~~~~~~~ 160 (509)
++..|+....+|++........ |.+ +..+|... ..++.+. .+.+++.+.+..+ .++.
T Consensus 146 ~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~-~~ia 224 (460)
T PRK12403 146 QKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGA-ENVA 224 (460)
T ss_pred CCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCC-CceE
Confidence 2335666677888765433222 211 12222110 0001111 2445555543211 2577
Q ss_pred EEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 161 AIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 161 ~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
+|++.....-.|. ..+++.+++|.++|++||+++|.||++..|...|. ......+ ++.++ ++ +++|.
T Consensus 225 avI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~--~~a~e~~--gv~PD-----iv---~~gK~ 292 (460)
T PRK12403 225 GFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGE--WFAHEHF--GFEPD-----TL---SIAKG 292 (460)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch--hhhhhhc--CCCCC-----eE---EEccc
Confidence 8887655666676 56789999999999999999999999998865542 2222211 22222 44 57999
Q ss_pred cCCCCCC-eeEEEeeecCCHHHHHHHH
Q psy13922 240 YMGECGL-RGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 240 ~~G~~Gl-r~G~v~~~~~~~~~~~~l~ 265 (509)
+ | .|. ++|.++ .++++++.+.
T Consensus 293 l-g-gG~~Piga~v---~~~~i~~~~~ 314 (460)
T PRK12403 293 L-T-SGYVPMGGLV---LSKRIAEALV 314 (460)
T ss_pred c-c-ccccceEEEE---ECHHHHHHHh
Confidence 9 4 785 999887 6788888875
No 320
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=9.6e-14 Score=146.60 Aligned_cols=213 Identities=13% Similarity=0.146 Sum_probs=134.0
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+........+ .. +.+..+++.+.+... -..+.+++++++++|++.+++..+.. |..
T Consensus 74 ~p~v~~Ai~~ql~~l~~~~~~~~-~~----~~~~~lae~L~~~~p--~~~~~v~f~~SGseAve~AlklAr~~~~~~g~t 146 (460)
T PRK06916 74 VPELDEAIREQLNKIAHSTLLGL-AN----VPSILLAEKLIEVVP--EGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKP 146 (460)
T ss_pred CHHHHHHHHHHHHhCCCcccccc-CC----HHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 78899999999987321111112 12 233444544443322 12358999999999999999987641 222
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCCCC--CCC--------CCHHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDESK--QWG--------LPISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~--~~~--------~d~~~L~~~i~~~~~~~~~ 159 (509)
.+..|+....+|++....+...+. .+..+|..... .+. -+++.+++.++... .++
T Consensus 147 gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~i 224 (460)
T PRK06916 147 KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKH--EEI 224 (460)
T ss_pred CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCC--CcE
Confidence 355899999999987654433211 11222211100 011 12456667675321 268
Q ss_pred eEEEEeC-CCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 160 RAIVIIN-PGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 160 ~~ivi~~-p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
.+|++.. .+.-.|. ..+++.+++|.++|++||+++|.||++..|...| ....... .++.++ ++ +++
T Consensus 225 AAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG--~~~a~~~--~gv~PD-----iv---~~g 292 (460)
T PRK06916 225 AAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG--KMFACEH--ENVTPD-----IM---TAG 292 (460)
T ss_pred EEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc--hhhHHHh--cCCCCC-----ee---eee
Confidence 8888875 4666676 5799999999999999999999999999885543 2222221 122222 44 669
Q ss_pred cccCCCCC-CeeEEEeeecCCHHHHHHHH
Q psy13922 238 KGYMGECG-LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 238 K~~~G~~G-lr~G~v~~~~~~~~~~~~l~ 265 (509)
|.+ | .| +++|.++ .++++++.+.
T Consensus 293 K~l-~-gG~~Pi~av~---~~~ei~~~~~ 316 (460)
T PRK06916 293 KGL-T-GGYLPIAITV---TTDEIYNAFY 316 (460)
T ss_pred hhh-h-cCccccceee---ecHHHHHHhh
Confidence 999 4 78 5999998 7888888774
No 321
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=1.8e-13 Score=144.52 Aligned_cols=213 Identities=11% Similarity=0.100 Sum_probs=134.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+........|. .+.+..+++.+.+... ...+.+++++++++|.+.+++..+.. +..
T Consensus 65 ~p~v~~Ai~~ql~~l~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t 137 (466)
T PRK07030 65 NPRINQRIKDQVDQLEHVILAGFS-----HEPVIELSERLVKITP--PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKP 137 (466)
T ss_pred CHHHHHHHHHHHHhcCCccccccC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCC
Confidence 588999999999873211111122 2344445555543322 12358999999999999999987432 211
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CCE------------EEEEecCCCC--CCCC--------CHHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NME------------QIGYYLDESK--QWGL--------PISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~~------------~~~v~~~~~~--~~~~--------d~~~L~~~i~~~~~~~~~ 159 (509)
.+.+|+...-+|++....+... |.. +..+|..... .++. +++.+++.+.... .++
T Consensus 138 ~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~--~~i 215 (466)
T PRK07030 138 RKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHH--DEI 215 (466)
T ss_pred CCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCC--Cce
Confidence 3457999999999876544332 211 1222211100 0111 2455677776321 267
Q ss_pred eEEEEeC-CCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 160 RAIVIIN-PGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 160 ~~ivi~~-p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
.+|++.. .+.-.|. ..+++.+++|.++|++||+++|.||++..|...+. ...... .++.++ ++ +++
T Consensus 216 AAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~--~~a~~~--~gv~PD-----iv---~~g 283 (466)
T PRK07030 216 AAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT--MFACEQ--AGIRPD-----FL---CLS 283 (466)
T ss_pred EEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc--chHHHh--cCCCCC-----EE---eee
Confidence 8888865 3555576 77889999999999999999999999999866542 222221 123332 44 569
Q ss_pred cccCCCCC-CeeEEEeeecCCHHHHHHHH
Q psy13922 238 KGYMGECG-LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 238 K~~~G~~G-lr~G~v~~~~~~~~~~~~l~ 265 (509)
|.+ | .| +++|.++ .++++++.+.
T Consensus 284 Kgl-~-gG~~Pi~av~---~~~ei~~~~~ 307 (466)
T PRK07030 284 KAL-T-GGYLPLAAVL---TTDTVYQAFY 307 (466)
T ss_pred hhc-c-CCcccceEEE---ecHHHHHHHh
Confidence 999 4 79 5999998 7999988874
No 322
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=3.6e-13 Score=140.73 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=129.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.+.+++.+++++........+ .. +....+++.+.+..+ -..+.+++++++++|++.+++..+.- |.+
T Consensus 58 ~p~i~~ai~~q~~~~~~~~~~~~-~~----~~~~~lae~L~~~~p--~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~ 130 (422)
T PRK05630 58 HPRLKAAAHKQIDTMSHVMFGGL-TH----EPAIKLTRKLLNLTD--NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHP 130 (422)
T ss_pred CHHHHHHHHHHHHhCCCcccCCc-CC----HHHHHHHHHHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 68999999999987321111111 12 233444444443322 12368999999999999999886532 222
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CC-------------EEEEEecCCCCCCCCC-------HHHHHHHHHhhhccCCceE
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NM-------------EQIGYYLDESKQWGLP-------ISELERSITEARKHCNPRA 161 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~~~~d-------~~~L~~~i~~~~~~~~~~~ 161 (509)
++.+|+....+|++....+... +. ....+|.... ...+ .+.+++.+.+ ++.+
T Consensus 131 ~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~-----~iAA 203 (422)
T PRK05630 131 ERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE-----TVAA 203 (422)
T ss_pred CCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh-----ceEE
Confidence 3457999999999865443322 11 1122222111 0111 2334444443 6888
Q ss_pred EEEeC-CCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 162 IVIIN-PGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 162 ivi~~-p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
|++.. ++.-.|. ..+++.+++|.++|++||+++|.||++..|...+ ....... .++.++ ++ +++|.
T Consensus 204 vi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG--~~~a~~~--~gv~PD-----i~---t~gK~ 271 (422)
T PRK05630 204 IIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG--ELFATLA--AGVTPD-----IM---CVGKA 271 (422)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc--hhhHHHh--cCCCCC-----ee---eeech
Confidence 88875 3666777 5678899999999999999999999998875543 2222211 122222 33 77999
Q ss_pred cCCCCC-CeeEEEeeecCCHHHHHHHH
Q psy13922 240 YMGECG-LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 240 ~~G~~G-lr~G~v~~~~~~~~~~~~l~ 265 (509)
++ .| .++|+++ .++++.+.+.
T Consensus 272 l~--gG~~p~~av~---~~~~i~~~~~ 293 (422)
T PRK05630 272 LT--GGFMSFAATL---CTDKVAQLIS 293 (422)
T ss_pred hh--cCccccceee---ccHHHHHHHh
Confidence 84 67 5899998 7999988875
No 323
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.59 E-value=1.3e-12 Score=138.19 Aligned_cols=215 Identities=12% Similarity=0.077 Sum_probs=135.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCC---CCCCcEEEeCCHHHHHHHHHHHhhcC----
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQP---ADWQDVILSAGASDGIKSVLKLLIED---- 99 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~---~~~~~i~~t~G~~~al~~~~~~l~~~---- 99 (509)
+|.|.+++.+++++........|. .+.+..+++.+.+..... -..+.+++++++++|++.+++..+.-
T Consensus 82 ~p~i~~Ai~~q~~~l~~~~~~~~~-----~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~ 156 (472)
T PRK08742 82 EPRIGAAIAAQAGELEQVMLAGFT-----HEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNR 156 (472)
T ss_pred CHHHHHHHHHHHHhCCCccccccC-----CHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhc
Confidence 588999999988763211111122 223445555554432210 02358999999999999999987542
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCCCC--CCCC--------CHHHHHHHHHhhhcc
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDESK--QWGL--------PISELERSITEARKH 156 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~--~~~~--------d~~~L~~~i~~~~~~ 156 (509)
|..++.+|+...-+|++....+...+. .+..+|..... .++. +++.+++.+... .
T Consensus 157 g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~ 234 (472)
T PRK08742 157 GEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQS--P 234 (472)
T ss_pred CCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhC--C
Confidence 322355899999999987654433211 11222221100 0111 245666666531 1
Q ss_pred CCceEEEEeC-CCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEE
Q psy13922 157 CNPRAIVIIN-PGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFM 234 (509)
Q Consensus 157 ~~~~~ivi~~-p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 234 (509)
.++.+|++.. .++-.|. ..+++.++++.++|++||+++|.||++..|...+ ....... .++.++ ++
T Consensus 235 ~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG--~~~a~e~--~gv~PD-----iv--- 302 (472)
T PRK08742 235 GEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTG--TLFACEQ--AGVMPD-----LL--- 302 (472)
T ss_pred CceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc--cchHHHh--cCCCCC-----EE---
Confidence 2678888865 4666676 6789999999999999999999999999987654 2322222 123222 44
Q ss_pred ecccccCCCCCC-eeEEEeeecCCHHHHHHHH
Q psy13922 235 SCSKGYMGECGL-RGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 235 S~SK~~~G~~Gl-r~G~v~~~~~~~~~~~~l~ 265 (509)
+++|.+ | .|+ ++|.++ .++++++.+.
T Consensus 303 ~~gKgl-~-gG~~Plaav~---~~~ei~~~~~ 329 (472)
T PRK08742 303 CLSKGL-T-GGFLPLSAVL---ATQQLYDAFL 329 (472)
T ss_pred EEcccc-c-CCCCCcceee---ccHHHHHHhh
Confidence 569999 4 784 999998 7999988774
No 324
>PRK07483 hypothetical protein; Provisional
Probab=99.58 E-value=1.1e-12 Score=137.88 Aligned_cols=215 Identities=15% Similarity=0.093 Sum_probs=131.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.|.+++.+++.+...-....|. .+....+++.+.+... -..+.+++++++++|++.+++..+.- |.+
T Consensus 48 ~p~v~~av~~ql~~~~~~~~~~~~-----~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~ 120 (443)
T PRK07483 48 HPRVIAAIHAQIDRLAYAHTSFFT-----TEPAEALADRLVAAAP--AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQP 120 (443)
T ss_pred CHHHHHHHHHHHHhccCccccccC-----CHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 588999999999873211111121 2344455555544322 12368999999999999999887542 222
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CCE------------EEEEecCCCCCC---CCC--------HHHHHHHHHhhhccCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NME------------QIGYYLDESKQW---GLP--------ISELERSITEARKHCN 158 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~~------------~~~v~~~~~~~~---~~d--------~~~L~~~i~~~~~~~~ 158 (509)
.+.+|+....+|++........ |-. +..++.....+. ..+ ++.+++.+..... .+
T Consensus 121 ~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~ 199 (443)
T PRK07483 121 QRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGP-DT 199 (443)
T ss_pred CCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCC-Cc
Confidence 3557999999999876443322 110 111221100000 000 2456665542111 26
Q ss_pred ceEEEEeCCCC-CCC-CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec
Q psy13922 159 PRAIVIINPGN-PTG-QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC 236 (509)
Q Consensus 159 ~~~ivi~~p~N-PtG-~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 236 (509)
+.+|++...+. -.| ...+++.+++|.++|++||+++|.||++..|...+ .+.....+ ++.++ ++ ++
T Consensus 200 iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG--~~~a~~~~--gv~PD-----iv---~~ 267 (443)
T PRK07483 200 VAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG--TLFACEED--GVAPD-----LV---TI 267 (443)
T ss_pred eEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc--HHHHHhhc--CCCCC-----ee---ee
Confidence 77888864443 335 47788999999999999999999999999986554 22222221 22222 33 66
Q ss_pred ccccCCCCCC-eeEEEeeecCCHHHHHHHHH
Q psy13922 237 SKGYMGECGL-RGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 237 SK~~~G~~Gl-r~G~v~~~~~~~~~~~~l~~ 266 (509)
+|.++ .|+ ++|.++ .++++.+.+..
T Consensus 268 gK~l~--gG~~Pi~av~---~~~~i~~~~~~ 293 (443)
T PRK07483 268 AKGLG--AGYQPIGAVL---ASDRIYDAIAD 293 (443)
T ss_pred hhhhc--cCccccEEEE---EcHHHHHHHhc
Confidence 99994 796 999998 78899888753
No 325
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.58 E-value=7e-13 Score=135.49 Aligned_cols=218 Identities=13% Similarity=0.118 Sum_probs=140.4
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh----cCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI----EDVDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~----~~gd~ 102 (509)
-+.+.+++.+++.+..--......... ..+|-+.++++.-. -+-++|++|+|+++|++.+++... ..|.+
T Consensus 62 ~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~aP~-----~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p 135 (449)
T COG0161 62 RPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELAPE-----GGLDHVFFTDSGSEAVETALKMALQYWRARGQP 135 (449)
T ss_pred CHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhCCC-----CCccEEEEeCCchHHHHHHHHHHHHHHHhcCCC
Confidence 478999999999985432222122212 35566666665510 125689999999999999998864 35665
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC--------------EEEEEecCC---C---CCCC----CCHHHHHHHHHhhhccCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM--------------EQIGYYLDE---S---KQWG----LPISELERSITEARKHCN 158 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~--------------~~~~v~~~~---~---~~~~----~d~~~L~~~i~~~~~~~~ 158 (509)
+|.++|.-...|++-.-.....|. .+..++... . +.+. -..++|++.|..+.. .+
T Consensus 136 ~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~-~~ 214 (449)
T COG0161 136 QRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGP-ET 214 (449)
T ss_pred cceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCc-cc
Confidence 666788889999875433222211 122222211 0 1111 125677777776431 26
Q ss_pred ceEEEEeCCCCC-CCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec
Q psy13922 159 PRAIVIINPGNP-TGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC 236 (509)
Q Consensus 159 ~~~ivi~~p~NP-tG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 236 (509)
+.++|+.....- +|. ++|+..|+++.++|++||+++|.||+-.+|..+|. ...... .++.++ +-++
T Consensus 215 IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~--~FA~e~--~gi~PD--------i~~~ 282 (449)
T COG0161 215 IAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK--MFACEH--AGIVPD--------ILCL 282 (449)
T ss_pred EEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCch--hhhhhh--cCCCCC--------eeee
Confidence 778777544444 775 77889999999999999999999999999988762 222222 223332 4467
Q ss_pred ccccCCCCCCeeEEEeeecCCHHHHHHHHHh
Q psy13922 237 SKGYMGECGLRGGYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 237 SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~ 267 (509)
+|.++ -.-+++|.++ .+.++.+.+..-
T Consensus 283 aKGLT-~GY~Pl~a~l---~~~~I~~~~~~~ 309 (449)
T COG0161 283 AKGLT-GGYLPLSAVL---TSDRIYEAFSDG 309 (449)
T ss_pred ccccc-ccchhhHhHh---hhHHHHHHHhcc
Confidence 99885 2457888887 688888888764
No 326
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.57 E-value=4.8e-13 Score=139.98 Aligned_cols=293 Identities=14% Similarity=0.148 Sum_probs=195.9
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC-
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV- 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g- 100 (509)
..+..++...+.+...+......+.. |+ +..++.+.+..++.+.++.+ ..-.-.+|+|+|+++.+.+.+.....
T Consensus 70 ~~~~~~~~a~~~~~~~~~~nl~d~~~-~p---~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~ 144 (460)
T COG0076 70 CPTRVPPVAAELLVSALNKNLGDPDE-SP---AAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWR 144 (460)
T ss_pred CCCCCHHHHHHHHHHHHhhcCCCccc-Ch---hHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHH
Confidence 45556677777777777773322222 44 66889999999999988855 33357899999999988887764321
Q ss_pred ---------CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceE--EEEeCCCC
Q psy13922 101 ---------DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRA--IVIINPGN 169 (509)
Q Consensus 101 ---------d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~--ivi~~p~N 169 (509)
..+.+.|+++.-.|.++...+..+|.....+++++. ++.+|++.+++.+++. +.. |+.+.++-
T Consensus 145 ~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~-----t~~g~vV~~aGtT 218 (460)
T COG0076 145 KRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDEN-----TIGGVVVGTAGTT 218 (460)
T ss_pred HHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhh-----ccCceEEEEecCC
Confidence 001236999999999999999999999999999875 6799999999999984 444 77789999
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeE
Q psy13922 170 PTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGG 249 (509)
Q Consensus 170 PtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G 249 (509)
++|.+ +++++|.++|+++++++++|.+|+.+..-- ...... .....+..+.|++ +++|.. ..-...|
T Consensus 219 ~~G~i---Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf----~~~~~~---~~f~l~~vdSIt~-d~HK~g--~aP~~~G 285 (460)
T COG0076 219 DTGSI---DDIEELADIAEEYGIWLHVDAAFGGFLLPF----LEPDGR---WDFGLEGVDSITV-DGHKYG--LAPIGCG 285 (460)
T ss_pred CCCcc---CCHHHHHHHHHHcCCcEEEEccccceeecc----cCccch---hhcCCCCceEEEE-Cccccc--CCCCCce
Confidence 99998 779999999999999999999999876421 111100 0011124567877 889995 5778999
Q ss_pred EEeeecCCH-HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC
Q psy13922 250 YSEVINLDP-GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 250 ~v~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 328 (509)
|+++ .++ .+.+.+.. ...+...... +.+ .+.++++. . .++.....
T Consensus 286 ~il~--rd~e~l~~~~~~-~~~yl~~~~~-----------~~~----------ti~~sr~~--~-~~~~~~~~------- 331 (460)
T COG0076 286 VVLF--RDEEALRRILIF-ADYYLPGGGI-----------PNF----------TILGSRPG--R-QALALYAN------- 331 (460)
T ss_pred EEEE--ECHHHhhhhhhc-ccccCCCCCc-----------Cce----------eEeeccch--H-HHHHHHHH-------
Confidence 9987 888 45554432 2211111000 000 01111111 0 11111111
Q ss_pred chHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEEe
Q psy13922 329 SYEQ-FSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYAF 373 (509)
Q Consensus 329 ~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~ 373 (509)
+.. ..+.++++.+...+.+.++.+.|++.+.+++.. |..+...+
T Consensus 332 -l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~f 377 (460)
T COG0076 332 -LRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAF 377 (460)
T ss_pred -HHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEE
Confidence 011 123467778888899999999999996688875 55554443
No 327
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.57 E-value=7.1e-13 Score=138.87 Aligned_cols=213 Identities=12% Similarity=0.090 Sum_probs=131.0
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
+|.+.+++.+++.+....... +.......++-+.+++.. + -.-+.+++++++++|++.+++..+.. +.+
T Consensus 63 ~p~v~~ai~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~----~--~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~ 135 (427)
T TIGR00508 63 HPRLNAAAQKQIDKMSHVMFG-GFTHKPAIELCQKLVKMT----P--NALDCVFLADSGSVAVEVALKMALQYWQAKGEK 135 (427)
T ss_pred CHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHhhC----C--CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCC
Confidence 689999999998873211111 111222234444444433 2 12368999999999999999876542 222
Q ss_pred CCCeEEEcCCCChhHHHHHHhc-CCE-------------EEEEecCCCCCCC-----CCHHHHHHHHHhhhccCCceEEE
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEF-NME-------------QIGYYLDESKQWG-----LPISELERSITEARKHCNPRAIV 163 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~-g~~-------------~~~v~~~~~~~~~-----~d~~~L~~~i~~~~~~~~~~~iv 163 (509)
.+..|+....+|++....+... +.. +..++.. ...+. -|++.+++.+.... .++.+|+
T Consensus 136 ~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~l~~~l~~~~--~~vaavi 212 (427)
T TIGR00508 136 NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEAITPLAKLMELHS--DEIAAVI 212 (427)
T ss_pred CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHHHHHHHHHHHHhcC--CcEEEEE
Confidence 2458999999999875443332 211 0111110 00111 14567777776421 2567777
Q ss_pred EeCC-CCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 164 IINP-GNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 164 i~~p-~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
+... ++-.|. ..+.+++++|.++|++||+++|+||++.++...+. ...... .++.++ ++ +++|.+
T Consensus 213 vEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~--~~~~~~--~~v~pD-----i~---~~gK~l- 279 (427)
T TIGR00508 213 LEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK--LFACEH--AGVVPD-----IL---CVGKAL- 279 (427)
T ss_pred EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--cchhhh--cCCCCC-----EE---Eechhh-
Confidence 7653 666665 66899999999999999999999999987755432 212111 122221 33 469999
Q ss_pred CCCCC-eeEEEeeecCCHHHHHHHHH
Q psy13922 242 GECGL-RGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 242 G~~Gl-r~G~v~~~~~~~~~~~~l~~ 266 (509)
| .|+ .++.++ .++++++.+..
T Consensus 280 ~-gG~~p~~a~~---~~~~~~~~~~~ 301 (427)
T TIGR00508 280 T-GGYMTLSATV---TTDKVAQTISS 301 (427)
T ss_pred h-cCcccceEEE---EcHHHHHHHhc
Confidence 4 785 788887 78899888864
No 328
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.56 E-value=2.6e-12 Score=135.69 Aligned_cols=230 Identities=14% Similarity=0.112 Sum_probs=131.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-CcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
+|.|.+++.+++.+.. .+. +. .-..+.+..+++.+.+..+..... ..++++++++||.+.+++..+.... ++
T Consensus 76 ~p~v~~Ai~~q~~~~~--~~~-~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tg--r~ 148 (459)
T PRK06931 76 HPDVLQSIQDVLTSGL--PLH-TL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTG--RS 148 (459)
T ss_pred CHHHHHHHHHHHhhhc--ccc-cc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcC--CC
Confidence 6889999999887611 111 11 011345555666665442211011 2346668889999999998765432 45
Q ss_pred eEEEcCCCChhHHHHHHhcCC-------------EEEEEecCCC--CCCC----CCHHHHHHHHHhhh-----ccCCceE
Q psy13922 106 GVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDES--KQWG----LPISELERSITEAR-----KHCNPRA 161 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~--~~~~----~d~~~L~~~i~~~~-----~~~~~~~ 161 (509)
.|+...-+|++....+...+. .+..+|.... ..|. -+.+.+++.++... ...++.+
T Consensus 149 ~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAA 228 (459)
T PRK06931 149 NVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAA 228 (459)
T ss_pred eEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEE
Confidence 799999999998755543211 1222222110 0011 02333333222211 1125788
Q ss_pred EEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccccc
Q psy13922 162 IVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGY 240 (509)
Q Consensus 162 ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 240 (509)
|++...+.-.|. ..+++.++++.++|++||+++|.||++.+|...+ ....... .++.++ + .+++|.+
T Consensus 229 vI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG--~~~a~~~--~gv~PD-----i---vt~gK~l 296 (459)
T PRK06931 229 VILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTG--KMFAFEH--AGIEPD-----I---IVMSKAV 296 (459)
T ss_pred EEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCc--hHHHhhh--cCCCCC-----E---EEecccc
Confidence 888544544565 6789999999999999999999999999986554 2222222 122222 3 3669999
Q ss_pred CCCCCCeeEEEeeecCCHHHHHHHHHh-hhcccCcchhhhhc
Q psy13922 241 MGECGLRGGYSEVINLDPGVKAMLHKS-ISAMLCPTVLALVS 281 (509)
Q Consensus 241 ~G~~Glr~G~v~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~ 281 (509)
| .|+++|.++ .++++ +.+... ...+.+.+.+++++
T Consensus 297 -~-gG~Pi~av~---~~~~~-~~~~~~~~~~T~~gnpla~aa 332 (459)
T PRK06931 297 -G-GGLPLAVLG---IKKEF-DAWQPGGHTGTFRGNQLAMAT 332 (459)
T ss_pred -c-CCcceeeee---eHHHH-hhccCCCCCCCCCCCHHHHHH
Confidence 4 799999876 45553 554321 11333455554444
No 329
>PRK06148 hypothetical protein; Provisional
Probab=99.56 E-value=1.6e-12 Score=149.00 Aligned_cols=228 Identities=10% Similarity=0.043 Sum_probs=138.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
.|.|.+++.+++.... ....|. .+....+++.+.+... -.-+.++++++++||+..+++..+.... ++.
T Consensus 640 hp~v~~Ai~~q~~~l~--~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsEA~e~AlklAr~~tG--r~~ 708 (1013)
T PRK06148 640 HPRVVAAAARQAARLN--TNTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGSEANSLALRLARAHTG--QRD 708 (1013)
T ss_pred CHHHHHHHHHHHhhcC--CcCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHHHHHHHHHHhcC--CCe
Confidence 6889999999998732 122232 2334445554443322 1235799999999999999998876432 447
Q ss_pred EEEcCCCChhHHHHHHhc-C------------CEEEEEecCC--CCCCCC-C-------HHHHHHHHHhhhc-cCCceEE
Q psy13922 107 VLIPIPQYPLYSASLAEF-N------------MEQIGYYLDE--SKQWGL-P-------ISELERSITEARK-HCNPRAI 162 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g------------~~~~~v~~~~--~~~~~~-d-------~~~L~~~i~~~~~-~~~~~~i 162 (509)
|+....+|++....+... + ..+..++... ...|.. + .+.+++.++.... ..++.+|
T Consensus 709 ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAv 788 (1013)
T PRK06148 709 AIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFF 788 (1013)
T ss_pred EEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEE
Confidence 999999999875433221 1 0111111110 001111 1 1345555543211 1257888
Q ss_pred EEeCCCCCCC-CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 163 VIINPGNPTG-QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 163 vi~~p~NPtG-~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
++.....-.| ...+++.++++.++|+++|+++|.||++.+|...|. .+...... ++.++ + -+++|.+
T Consensus 789 I~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~-~~~a~e~~--gv~PD-----i---vt~gK~l- 856 (1013)
T PRK06148 789 IAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGS-HWWAFETQ--GVVPD-----I---VTMGKPI- 856 (1013)
T ss_pred EEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCC-cchhhhhc--CCCcc-----e---eeecccc-
Confidence 8854444445 477899999999999999999999999999866542 12222221 22222 3 3669999
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHHhh--hcccCcchhhhhc
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHKSI--SAMLCPTVLALVS 281 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~ 281 (509)
| .|+++|.++ .++++++.+.... ..+.+.+.+++++
T Consensus 857 g-gG~Plgav~---~~~ei~~~~~~g~~~~~Tf~gnpla~aa 894 (1013)
T PRK06148 857 G-NGHPMGAVV---TTREIADSFDNGMEYFNTFGGNPVSCAI 894 (1013)
T ss_pred c-CCcceEEEE---EcHHHHhhccCCCccccCCCCCHHHHHH
Confidence 5 899999998 7899998875321 1334455554444
No 330
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.55 E-value=5.2e-12 Score=133.54 Aligned_cols=301 Identities=15% Similarity=0.094 Sum_probs=168.8
Q ss_pred CCCCCCHHHHHHHHHHHhc-cc-CCCccc-CCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE---eCCHHHHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDG-CR-GQSVGS-YTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL---SAGASDGIKSVLKL 95 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~-~~-~~~~~~-Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~---t~G~~~al~~~~~~ 95 (509)
..+..++.+++++...+.+ .. +....+ |+......++.+...+...+.++ ...+.+++ +.+++.|+..++.+
T Consensus 42 sen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~~~SG~~AN~av~~a 119 (475)
T PLN03226 42 SENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQPLSGSPANFAVYTA 119 (475)
T ss_pred CCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecCcCchHHHHHHHHHH
Confidence 5666789999999888843 11 111112 33333333343322222333333 23344444 35667788899999
Q ss_pred hhcCCCCCCCeEEEcCC---CChhHHHHH---HhcCCE----EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe
Q psy13922 96 LIEDVDGKKPGVLIPIP---QYPLYSASL---AEFNME----QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII 165 (509)
Q Consensus 96 l~~~gd~~~~~Vlv~~p---~y~~~~~~~---~~~g~~----~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~ 165 (509)
++++|| +|+..+. .|..+.... +..+.. ++++.++++ +..+|+++|++.+.+. ++++|++.
T Consensus 120 L~~pgD----~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~-~g~iD~d~Le~~l~~~----~pklIv~~ 190 (475)
T PLN03226 120 LLQPHD----RIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDES-TGLIDYDKLEKKAMLF----RPKLIIAG 190 (475)
T ss_pred hCCCCC----EEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCC-CCCcCHHHHHHHHhhc----CCeEEEEe
Confidence 999999 9998553 222222111 111222 224444543 3578999999999764 68876653
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 166 NPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 166 ~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
.++ +|...+ +++|.++|+++|+++++|+++.......+....++. ..++ +++|++|++. |
T Consensus 191 -~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-----------~~Di-v~~t~hK~L~---G 250 (475)
T PLN03226 191 -ASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-----------YCDV-VTTTTHKSLR---G 250 (475)
T ss_pred -cCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC-----------CCeE-EEecCccccc---C
Confidence 233 566655 778999999999999999998775543221111110 2234 4669999883 4
Q ss_pred CeeEEEeeecCCHHHHH-----------H---HHHhhh-c-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCc
Q psy13922 246 LRGGYSEVINLDPGVKA-----------M---LHKSIS-A-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQ 309 (509)
Q Consensus 246 lr~G~v~~~~~~~~~~~-----------~---l~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (509)
-+.|+++ .++++++ . +..... . .++++..
T Consensus 251 P~Gg~I~---~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~-------------------------------- 295 (475)
T PLN03226 251 PRGGMIF---FRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNH-------------------------------- 295 (475)
T ss_pred CCceEEE---EchhhcccccCCCccHHHHHHHhccccCCccCCCchHH--------------------------------
Confidence 4557776 4554432 1 111110 0 1111111
Q ss_pred ccccchhhcccCCCCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC-ceeEEeecCCCCHHHHHHHh
Q psy13922 310 SVGQTVMDCVVNPPQPGEPSYEQFS-REKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ-GAMYAFPQMKLPAKAIAKAK 387 (509)
Q Consensus 310 ~~~~~al~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 387 (509)
..+++..++. ... ...++.++.+.++..++.+.|.+. |+++..+. ..-.+++++. +
T Consensus 296 --~iaal~aAl~----------~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv~~~-~-------- 353 (475)
T PLN03226 296 --TIAALAVALK----------QAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLWDLR-P-------- 353 (475)
T ss_pred --HHHHHHHHHH----------HHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEEEcc-C--------
Confidence 2222222221 110 014566788889999999999886 98887532 2344455553 1
Q ss_pred hcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 388 AEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 388 ~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
.|+. ..+ +...|++.||.+..+.
T Consensus 354 -~gi~-~~~-~~~~L~~~~I~~nk~~ 376 (475)
T PLN03226 354 -LGLT-GSR-VEKVLDLAHITLNKNA 376 (475)
T ss_pred -CCCC-HHH-HHHHHHHCCCEECCCC
Confidence 1332 222 5788999999998654
No 331
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.55 E-value=7.4e-14 Score=138.04 Aligned_cols=205 Identities=18% Similarity=0.180 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeE
Q psy13922 28 DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGV 107 (509)
Q Consensus 28 ~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~V 107 (509)
+.+.+++.++... .-. |+......++.+.++++++ .+..++++++|.+..+++++++++++ .|
T Consensus 9 ~~m~~a~~~a~~g----d~~-Yg~D~~~~~l~~~i~~l~g--------~e~a~f~~sGT~An~~al~~~~~~~~----~v 71 (290)
T PF01212_consen 9 PAMLEAMAAANVG----DDA-YGEDPTTARLEERIAELFG--------KEAALFVPSGTMANQLALRAHLRPGE----SV 71 (290)
T ss_dssp HHEEHHHHHTTSB-----CC-TTSSHHHHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHHHHTTE----EE
T ss_pred HHHHHHHHccccC----Ccc-cCCChhHHHHHHHHHHHcC--------CCEEEEeCCCChHHHHHHHHHHhcCC----ce
Confidence 4555555333332 334 9998888999999999993 45667899999999999999999988 99
Q ss_pred EEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCC-CCCCCHHHHHH
Q psy13922 108 LIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPT-GQVLTKENIQD 182 (509)
Q Consensus 108 lv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPt-G~~~s~~~l~~ 182 (509)
++..+.|.... ......|.+++.++..+.+ .+|++.|++.+.....+ +++++|+|++|+|-. |+++|.+++++
T Consensus 72 i~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G--~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~a 149 (290)
T PF01212_consen 72 ICADTAHIHFDETGAIEELSGAKLIPLPSDDDG--KLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRA 149 (290)
T ss_dssp EEETTEHHHHSSTTHHHHHTTCEEEEEBECTGT--BB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHH
T ss_pred eccccceeeeeccchhhHhcCcEEEECCCcccC--CCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHH
Confidence 99998766432 2235589999999987632 78999999999884332 478999999999974 78999999999
Q ss_pred HHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHH
Q psy13922 183 IIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKA 262 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~ 262 (509)
|.++|+++|+.++.|-+--..... ....++.++.. ..+++++ |++|.. |+++ |.+++ .++++++
T Consensus 150 i~~~a~~~gl~lhmDGARl~~a~~--~~~~~~~e~~~-------~~D~v~~-~~tK~~-g~~~---Gavl~--~~~~~i~ 213 (290)
T PF01212_consen 150 ISELAREHGLPLHMDGARLANAAA--ALGVSLAEIAA-------GADSVSF-GGTKNG-GAPG---GAVLA--GNKEFIA 213 (290)
T ss_dssp HHHHHHHHT-EEEEEETTHHHHHC--HHHHHHHHHHT-------TSSEEEE-ETTSTT--SSS---EEEEE--ESHHHHH
T ss_pred HHHHHHhCceEEEEehhhHHHhhh--cccccHHHHhh-------hCCEEEE-EEEccc-cccc---ceEEE--echHHHH
Confidence 999999999999999763221110 01223344431 3458877 999987 5543 55554 7888766
Q ss_pred HHHHh
Q psy13922 263 MLHKS 267 (509)
Q Consensus 263 ~l~~~ 267 (509)
.....
T Consensus 214 ~~~~~ 218 (290)
T PF01212_consen 214 KARRQ 218 (290)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 332
>PRK06149 hypothetical protein; Provisional
Probab=99.55 E-value=4.2e-12 Score=145.48 Aligned_cols=213 Identities=12% Similarity=0.102 Sum_probs=129.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
.|.|.+++.+++.... ...+|. .+....+++.+.+... -..+.++++++|++|...+++..+.-.. ++.
T Consensus 601 hp~v~~Ai~~q~~~l~--~~~~~~-----~~~~~elae~L~~~~p--~~~~~v~f~~SGsEA~e~AlklAr~~tg--r~~ 669 (972)
T PRK06149 601 HPRLAAAAARQWSLLN--TNSRFH-----YAAVAEFSERLAALAP--DGLDTVFLVNSGSEANDLAIRLAWAASG--RRD 669 (972)
T ss_pred CHHHHHHHHHHHHhcc--cccccc-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCchHHHHHHHHHHHHhcC--CCe
Confidence 5889999999888732 111121 2233444444433321 1235899999999999999996654322 347
Q ss_pred EEEcCCCChhHHHHHHhc-C-----CE--------EEEEecCCC--CCCC-CC-----HHHHHHHHHhhhc-cCCceEEE
Q psy13922 107 VLIPIPQYPLYSASLAEF-N-----ME--------QIGYYLDES--KQWG-LP-----ISELERSITEARK-HCNPRAIV 163 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g-----~~--------~~~v~~~~~--~~~~-~d-----~~~L~~~i~~~~~-~~~~~~iv 163 (509)
|+...-+|++........ + .. +..++.... ..|. .+ .+.+++.++.... ..++.+|+
T Consensus 670 ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI 749 (972)
T PRK06149 670 VVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFI 749 (972)
T ss_pred EEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEE
Confidence 888888898765332111 0 00 122221111 1121 12 2444555543211 13577777
Q ss_pred EeCC-CCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 164 IINP-GNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 164 i~~p-~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
+... ++-.....+++.+++|.++|++||+++|.||++.+|...|. .+..+... ++.++ ++ +++|.+ |
T Consensus 750 ~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~-~~~a~e~~--gv~PD-----iv---t~gK~l-g 817 (972)
T PRK06149 750 CEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGH-YFWGFEQQ--GVVPD-----II---TMAKGM-G 817 (972)
T ss_pred EcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCc-cchhhhhc--CCCCC-----EE---Eecccc-c
Confidence 7544 44444578899999999999999999999999988866542 12233221 22222 44 779999 5
Q ss_pred CCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 243 ECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 243 ~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
.|+++|.++ .++++++.+..
T Consensus 818 -~G~Pl~av~---~~~~i~~~~~~ 837 (972)
T PRK06149 818 -NGHPLGAVI---TRREIAEALEA 837 (972)
T ss_pred -CCeeeEEEE---EcHHHHhhhcc
Confidence 799999998 78899988864
No 333
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.53 E-value=7.8e-12 Score=131.49 Aligned_cols=173 Identities=11% Similarity=0.091 Sum_probs=103.6
Q ss_pred CHHHHH--HHHHHHhcccC--CCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC---
Q psy13922 27 PDDVKQ--RAQAVLDGCRG--QSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED--- 99 (509)
Q Consensus 27 p~~v~~--a~~~~l~~~~~--~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--- 99 (509)
+|.|.+ ++.+++.+... .....|. . +....+++.+.+..+ +-..+.|+++++++||++.+++..+..
T Consensus 63 ~p~v~~~~ai~~ql~~l~~~~~~~~~~~-~----~~~~~la~~l~~~~~-p~~~~~v~f~~SGsEAve~AlKlAr~~~~~ 136 (443)
T PRK08297 63 HPALADDPEFRAELGRAALNKPSNSDVY-T----VEMARFVDTFARVLG-DPELPHLFFVDGGALAVENALKVAFDWKSR 136 (443)
T ss_pred ChHHhhHHHHHHHHHHhhhhccccCCcC-C----HHHHHHHHHHHhhcC-CCCCCEEEEeCchHHHHHHHHHHHHHHhhc
Confidence 577888 88888876321 0111121 1 222334433332211 112358999999999999999987532
Q ss_pred -----CC--CCCCeEEEcCCCChhHHHHHHhc-CCEEE---EEec-------CCCCCC---C-----C------CHHHHH
Q psy13922 100 -----VD--GKKPGVLIPIPQYPLYSASLAEF-NMEQI---GYYL-------DESKQW---G-----L------PISELE 147 (509)
Q Consensus 100 -----gd--~~~~~Vlv~~p~y~~~~~~~~~~-g~~~~---~v~~-------~~~~~~---~-----~------d~~~L~ 147 (509)
|. +.+.+|+...-+|++....+... |.... ..+. .+...+ . . +++.++
T Consensus 137 ~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (443)
T PRK08297 137 KNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQAR 216 (443)
T ss_pred cccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHH
Confidence 21 12457999999999876554432 21100 0000 000000 0 0 234555
Q ss_pred HHHHhhhccCCceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccC
Q psy13922 148 RSITEARKHCNPRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207 (509)
Q Consensus 148 ~~i~~~~~~~~~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~ 207 (509)
+.+.+.. .++.+|++.....-.|. ..|++.+++|.++|++||+++|.||++.+|...+
T Consensus 217 ~~i~~~~--~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG 275 (443)
T PRK08297 217 AAFERHP--HDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTG 275 (443)
T ss_pred HHHHhCC--CcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccc
Confidence 6665321 26888888655555565 6889999999999999999999999999886653
No 334
>KOG1401|consensus
Probab=99.53 E-value=1.9e-12 Score=127.95 Aligned_cols=286 Identities=14% Similarity=0.103 Sum_probs=178.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC---C-
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD---G- 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd---~- 102 (509)
.|++.+++.+...+....... |-.-. .-++.+.+.+.+ +.. ..+.|++.+++|+|+..+++..++-.- +
T Consensus 74 npev~ral~~q~~k~~hs~~~-~~t~e-av~l~~~l~~~~----~~~-~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~ 146 (433)
T KOG1401|consen 74 NPEVARALAEQAKKLGHSSNG-YFTLE-AVELEEVLSAVL----GKG-SAERVFFCNSGTEANETALKFARKFTGKKHPE 146 (433)
T ss_pred CHHHHHHHHHHHhhheeccCc-cccHH-HHHHHHHHHhcc----cCC-CccEEEEecCCcHHHHHHHHHHHHhhcccCCc
Confidence 688889988888873211112 21111 233444444333 322 678999999999999999988765321 0
Q ss_pred CCCeEEEcCCCChhHHHHHHh-cCCEEEEEecC---CCC--CCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC-CC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAE-FNMEQIGYYLD---ESK--QWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ-VL 175 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~---~~~--~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~-~~ 175 (509)
++..+|....+|++-...+.. .+..-...|.+ ++- --.-|+..+++.++.+.. .+.++|+...+.-.|. ..
T Consensus 147 ~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~--~IaAVIvEPiqGaGG~~p~ 224 (433)
T KOG1401|consen 147 KKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG--EIAAVIVEPIQGAGGIIPA 224 (433)
T ss_pred cceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC--ceEEEEEecccCCCCcccC
Confidence 112588888899886544332 33222222221 110 001268999999988632 3788888766777776 77
Q ss_pred CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeec
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVIN 255 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~ 255 (509)
.++.+..|.++|+++++++|.||++.+|...+..--..... +.++ +.++.|.+ | .|+++|..+
T Consensus 225 ~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~----~~PD--------I~t~aK~L-~-gGlPigA~~--- 287 (433)
T KOG1401|consen 225 DPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFG----VTPD--------ITTVAKPL-G-GGLPIGATG--- 287 (433)
T ss_pred CHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhC----cCCc--------ceeehhhc-c-CCceeEEEe---
Confidence 88999999999999999999999999987654311112222 2222 55779999 5 899999998
Q ss_pred CCHHHHHHHHHhhh----cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 256 LDPGVKAMLHKSIS----AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 256 ~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
.+.++.+.+..-.. .+.+.+.+++.+ +..++..+.. .
T Consensus 288 v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa------------------------------~~~~l~~l~~---------~ 328 (433)
T KOG1401|consen 288 VRDKVAEMISPGDHLYHGGTFSGNPLACSA------------------------------GIKVLDELKD---------P 328 (433)
T ss_pred ehHHHHhhcCCCCccccCcccCCChhhhhH------------------------------HHHHHHHHcC---------H
Confidence 79999998864322 334455554444 5566666654 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCH
Q psy13922 332 QFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPA 380 (509)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~ 380 (509)
.+ +.++.+.-+..++.+.+.+.+-+....-....++++.+.+..|.
T Consensus 329 e~---~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~ 374 (433)
T KOG1401|consen 329 ET---LKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPV 374 (433)
T ss_pred HH---HHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeech
Confidence 33 66677777777777888877754322111334555555555443
No 335
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.52 E-value=1.8e-12 Score=132.95 Aligned_cols=340 Identities=11% Similarity=0.074 Sum_probs=189.3
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHhcccCCCcccCCC--CcchHHHHHHHHHHHhhhcCCCCCCCcEEEe-CCHHHHHHHHH
Q psy13922 18 PQLF-DDPRFPDDVKQRAQAVLDGCRGQSVGSYTD--SPGIEIIRRHVAQYISRRDGQPADWQDVILS-AGASDGIKSVL 93 (509)
Q Consensus 18 ~~~~-~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~--~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t-~G~~~al~~~~ 93 (509)
++.. |+-.+|+.|++++........ ..+++++ ..-+.+.|+.++++++ .+ +..+|+++ +|+|.+++.++
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~~~~--~~~hr~~~f~~~~~~~r~~l~~l~~----~~-~~~~v~f~~gs~T~a~~~~~ 77 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAASLF--GTSHRQAPVKNLVGRVREGLAELFS----LP-DGYEVILGNGGATAFWDAAT 77 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCcccc--ccCcCChHHHHHHHHHHHHHHHHhC----CC-CCceEEEECCchhHHHHHHH
Confidence 4433 566689999999754321110 0122332 2344667888888873 21 23478886 55999999999
Q ss_pred HHhhcCCCCCCCeEEEcCCCChh-HHHHHHh--cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 94 KLLIEDVDGKKPGVLIPIPQYPL-YSASLAE--FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 94 ~~l~~~gd~~~~~Vlv~~p~y~~-~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
..+..+ + .+++..-.|.. +...++. ++.++..++.+... .++. .+.. ++++|.+++..|.
T Consensus 78 ~~l~~~-~----~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~-----~~~~-----~~~lV~~~h~et~ 140 (361)
T TIGR01366 78 FGLIEK-K----SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGS--APEP-----QADP-----GVDVIAWAHNETS 140 (361)
T ss_pred Hhcccc-c----ccEEecCHHHHHHHHHHHhhhccCCceEEecCCCC--CCCC-----ccCC-----CCCEEEEcccCCc
Confidence 999743 2 44444444543 3344443 22355555543221 2332 1223 7999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 171 TGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
||...|. ++| ++++|+++|+|.+.+... ....+..+ +++ +.|-.|.+ |.+| .++.
T Consensus 141 tG~~~pi---~~I---~~~~g~~~iVDavqs~g~-----~~idv~~~-----------D~~-~~s~~K~l-g~~~-Gl~~ 195 (361)
T TIGR01366 141 TGVAVPV---RRP---EGSDDALVVIDATSGAGG-----LPVDIAET-----------DVY-YFAPQKNF-ASDG-GLWL 195 (361)
T ss_pred cceeccc---ccc---cccCCCeEEEEcCccccC-----CCCCHHHC-----------CEE-EEEchhhc-CCCC-ceEE
Confidence 9999994 444 478999999999988733 22333321 255 45779999 6664 2444
Q ss_pred EeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccc---hhhcccCCCCCCC
Q psy13922 251 SEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQT---VMDCVVNPPQPGE 327 (509)
Q Consensus 251 v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---al~~~~~~~~~~~ 327 (509)
++ .++++++++..........+.. .-+...+. ...+++........ ++..+++
T Consensus 196 ~~---~s~~~~~~~~~~~~~~~~~p~~--~d~~~~~~-------------~~~~~~t~~tp~i~~i~~l~~al~------ 251 (361)
T TIGR01366 196 AI---MSPAALERIEAIAASGRWVPEF--LSLPTAVD-------------NSLKNQTYNTPAIATLALLAEQID------ 251 (361)
T ss_pred EE---ECHHHHhhhhcccCCCCCCchh--hhHHHHHh-------------ccccCCCCCCchHHHHHHHHHHHH------
Confidence 44 5888888776433211110111 00000000 00112222222222 3344432
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CC---ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHh
Q psy13922 328 PSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQ---GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLE 403 (509)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~---~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~ 403 (509)
|-.....++...++.+++.+++.+.+.++++++.+. .. ......+.+ +. |++ ..+ +...|+
T Consensus 252 --~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~--~~---------g~~-~~~-v~~~L~ 316 (361)
T TIGR01366 252 --WMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDF--VD---------DID-AAT-VAKILR 316 (361)
T ss_pred --HHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEEC--CC---------ccC-HHH-HHHHHH
Confidence 111110156667888888889999999985555442 11 112122222 12 332 333 455567
Q ss_pred hcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe
Q psy13922 404 RTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI 483 (509)
Q Consensus 404 ~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~ 483 (509)
++||.+.++. .. -+.+ .||+|+
T Consensus 317 ~~gI~i~~~~--~~------------------------------------------------l~~~--------~vRis~ 338 (361)
T TIGR01366 317 ANGIVDTEPY--RK------------------------------------------------LGRN--------QLRVAM 338 (361)
T ss_pred HCCCeeccCc--cc------------------------------------------------cCCC--------cEEEEc
Confidence 7899986543 11 1112 799998
Q ss_pred e--cChHHHHHHHHHHHHHHHH
Q psy13922 484 L--PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 484 ~--~~~~~i~~~~~~l~~~~~~ 503 (509)
. ++.++|+.+++.|++++++
T Consensus 339 ~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 339 FPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred CCCCCHHHHHHHHHHHHHHHhh
Confidence 8 8999999999999998764
No 336
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.52 E-value=5.8e-11 Score=126.57 Aligned_cols=275 Identities=11% Similarity=0.131 Sum_probs=170.2
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCC----------C-CCCcEEEeCCHHHHHHHHHHHhhcCC-----------------
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQP----------A-DWQDVILSAGASDGIKSVLKLLIEDV----------------- 100 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~----------~-~~~~i~~t~G~~~al~~~~~~l~~~g----------------- 100 (509)
|..+....++.+.+.+++.+..+.. . ....-++|+|+|+|+-.++...++..
T Consensus 121 ~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~ 200 (522)
T TIGR03799 121 IETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFA 200 (522)
T ss_pred eecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchh
Confidence 5555566889999999998776411 1 11235778999999888777754320
Q ss_pred -----CCCCCeEEEcCCCChhHHHHHHhcCC---EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEE--eCCCCC
Q psy13922 101 -----DGKKPGVLIPIPQYPLYSASLAEFNM---EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVI--INPGNP 170 (509)
Q Consensus 101 -----d~~~~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi--~~p~NP 170 (509)
..++..|+++.-.|.++..++..+|. +++.+|.+++ +.+|++.|++.|++..+. +++.+.+ +..++.
T Consensus 201 ~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~--g~~d~~~L~~~i~~~~~~-g~~~~~vvataGtt~ 277 (522)
T TIGR03799 201 ALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDAN--NRIDVDALRDKCAELAEQ-NIKPLAIVGVAGTTE 277 (522)
T ss_pred hhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCC--CcCCHHHHHHHHHHHHHC-CCCcEEEEEEecCcC
Confidence 00234688888999999999998888 7899998764 489999999999754322 3343333 466779
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 171 TGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
||.+-| +++|+++|+++|+++++|.+|+....- ...+......+ ...+.+++ |.+|.+.|. ..+|.
T Consensus 278 tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~----~~~~r~~l~gl----e~aDSit~-d~HK~l~~P--~g~G~ 343 (522)
T TIGR03799 278 TGNIDP---LDEMADIAQELGCHFHVDAAWGGATLL----SNTYRHLLKGI----ERADSVTI-DAHKQLYVP--MGAGM 343 (522)
T ss_pred CCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHh----CHHHHHHhcCc----hhCCEEEE-ChhhcCCcC--cccEE
Confidence 999977 999999999999999999999864321 11122222211 12347766 889966333 45677
Q ss_pred EeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 251 SEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 251 v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
+++ .++.+.+.+.... .+...... .. +.+ ..++++.+.. +. .+-..+. +
T Consensus 344 llv--r~~~~~~~~~~~~-~Yl~~~~~-----~d-~~~------------~~legsR~~~-al-~lw~aL~--------~ 392 (522)
T TIGR03799 344 VLF--KDPALMSAIEHHA-EYILRKGS-----KD-LGS------------HTLEGSRPGM-AM-LVYAGLH--------I 392 (522)
T ss_pred EEE--eCHHHHHHhccCc-chhcCCCC-----Cc-ccc------------ceeecCcchH-HH-HHHHHHH--------H
Confidence 754 6777665553210 11100000 00 000 0122222211 11 1222211 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEE
Q psy13922 331 EQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYA 372 (509)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~ 372 (509)
- ....++.+.+...++++++.+.|++.|+++++. ++-+...
T Consensus 393 l-G~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~ 434 (522)
T TIGR03799 393 I-GRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLT 434 (522)
T ss_pred H-hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEE
Confidence 1 122378888899999999999999999999875 4444443
No 337
>PRK04311 selenocysteine synthase; Provisional
Probab=99.51 E-value=4.5e-11 Score=125.59 Aligned_cols=203 Identities=13% Similarity=0.147 Sum_probs=138.5
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCC-----cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDS-----PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~-----~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
+.+.+|+.+++++.+++.... ... |... .-...+++.+++++ | .++.+++++++.|+.+++.++
T Consensus 94 g~s~l~~~v~eav~~~~~~~~--~le-~~l~~g~~g~r~~~~e~~lA~l~----G----ae~a~vv~sgtaAl~l~l~~l 162 (464)
T PRK04311 94 GRALLSEAAIEAVTEAARGYS--NLE-YDLATGKRGSRDRALAALLCALT----G----AEDALVVNNNAAAVLLALNAL 162 (464)
T ss_pred CCCCCCHHHHHHHHHHHhccc--ccc-cchhhcccchHHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHh
Confidence 677789999999999987621 111 2211 12246777788777 3 346778888889999888665
Q ss_pred hcCCCCCCCeEEEcCCCChh------HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 97 IEDVDGKKPGVLIPIPQYPL------YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
.+|+ +||++...+.. +...++..|++++.++.+. ..+++.+++++++ ++++|++.+++||
T Consensus 163 -~~Gd----eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~-----~TklV~~vh~sN~ 228 (464)
T PRK04311 163 -AAGK----EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINE-----NTALLLKVHTSNY 228 (464)
T ss_pred -CCCC----EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCc-----cCeEEEEEcCCCc
Confidence 6777 99998764442 2345677899999987643 3478999999987 7999999999998
Q ss_pred --CC--CCCCHHHHHHHHHHHHHCCcEEEEcccCCccc----ccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 171 --TG--QVLTKENIQDIIKFAHREKLFLFADEVYQDNV----YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 171 --tG--~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
+| ...+ +++|+++|++||+++|+|.+.+.+. +.-. ..+.+.... +. +.+++ ++|.+|.+.|
T Consensus 229 ~i~G~~~~~d---l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~-~~p~~~~~l-~~-----GaDiv-~fSg~K~LgG 297 (464)
T PRK04311 229 RIEGFTKEVS---LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLP-DEPTVQELL-AA-----GVDLV-TFSGDKLLGG 297 (464)
T ss_pred cccccCCcCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCC-CCCchhhHH-hc-----CCcEE-EecCcccccC
Confidence 35 3444 9999999999999999999644331 1100 011222211 11 22244 5698999832
Q ss_pred CCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 243 ECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 243 ~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
| ..|+++ +++++++++++
T Consensus 298 -p--~~G~i~---g~~~li~~l~~ 315 (464)
T PRK04311 298 -P--QAGIIV---GKKELIARLKK 315 (464)
T ss_pred -C--ceEEEE---EcHHHHHHHhh
Confidence 3 478887 68888887763
No 338
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.50 E-value=4.2e-12 Score=124.11 Aligned_cols=154 Identities=22% Similarity=0.214 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhH----HHHHHhcCCEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY----SASLAEFNMEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~----~~~~~~~g~~~~~v 131 (509)
..|.+.|+.+-. | -.-+.+++++.|+.+++..+.++|| +|+-..--|.+. ...++..|.++..+
T Consensus 65 ~vlE~RiAaLEG---G-----~aa~a~aSG~AA~~~ai~~la~aGD----~iVss~~LYGGT~~lf~~tl~~~Gi~v~fv 132 (426)
T COG2873 65 DVLEERIAALEG---G-----VAALAVASGQAAITYAILNLAGAGD----NIVSSSKLYGGTYNLFSHTLKRLGIEVRFV 132 (426)
T ss_pred HHHHHHHHHhhc---c-----hhhhhhccchHHHHHHHHHhccCCC----eeEeeccccCchHHHHHHHHHhcCcEEEEe
Confidence 678888888763 2 2356678888999999999999999 999887766654 45567889999998
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
..+ |++.++++|++ ++|+|++..-.||.+.+++ ++.|+++|+++++++|+|..+..-. -.
T Consensus 133 d~~-------d~~~~~~aI~~-----nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpy-----l~ 192 (426)
T COG2873 133 DPD-------DPENFEAAIDE-----NTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPY-----LC 192 (426)
T ss_pred CCC-------CHHHHHHHhCc-----ccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcce-----ec
Confidence 643 79999999999 8999999999999999977 9999999999999999999886521 11
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
.++. +.--|+++|+||...| -|--+|-+++
T Consensus 193 rP~~-----------hGADIVvHS~TK~igG-hGt~iGG~iV 222 (426)
T COG2873 193 RPIE-----------HGADIVVHSATKYIGG-HGTAIGGVIV 222 (426)
T ss_pred chhh-----------cCCCEEEEeecccccC-CccccceEEE
Confidence 2221 1114668899999954 7777888774
No 339
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.49 E-value=4.7e-12 Score=132.96 Aligned_cols=198 Identities=10% Similarity=0.009 Sum_probs=118.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++++++... ... ..+.....++.+.+++.+ . ..+.+++++++++|...+++..+.-.. +..
T Consensus 66 ~p~v~~Ai~~q~~~~---~~~-~~~~~~~~~la~~l~~~~----p---~~~~v~f~~sGseA~e~AlklAr~~tg--r~~ 132 (431)
T PRK06209 66 YPPVVEAVREALQDG---CNF-TRPSAIELDAAESFLELI----D---GADMVKFCKNGSDATSAAVRLARAYTG--RDL 132 (431)
T ss_pred CHHHHHHHHHHHHhC---cCC-CCCCHHHHHHHHHHHHhC----C---ccceEEEecCHHHHHHHHHHHHHHHhC--CCe
Confidence 589999999999873 221 122221123445555443 1 136899999999999999998765432 335
Q ss_pred EEEc-CCCChhHHHHHH-----hcCCE--EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 107 VLIP-IPQYPLYSASLA-----EFNME--QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 107 Vlv~-~p~y~~~~~~~~-----~~g~~--~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
|+.. .-.|+++..... ..|.. .......-. .-|++.|++.++... .++.+|++... .|...+++
T Consensus 133 i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~--~~~aavi~Epv---~g~~~~~~ 204 (431)
T PRK06209 133 VARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR---YNDIASLEALFEDHP--GRIACVILEPA---TADEPQDG 204 (431)
T ss_pred EEEeccCccccccccccccCCCCCCCChhHhccccccC---CCCHHHHHHHHHhCC--CCEEEEEEccc---cCCCCCHH
Confidence 6654 233332111100 00110 000000000 227899999887521 14666666432 24477889
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
.+++|.++|++||+++|+||++..+.+.+ ...... .++.++ +.+++|.+ | .|+++|.++ .++
T Consensus 205 ~l~~l~~lc~~~g~lLI~DEv~tG~~~~~----~g~~~~-~gv~PD--------i~t~gK~l-g-gG~p~~av~---~~~ 266 (431)
T PRK06209 205 FLHEVRRLCHENGALFILDEMITGFRWHM----RGAQKL-YGIVPD--------LSCFGKAL-G-NGFAVSALA---GKR 266 (431)
T ss_pred HHHHHHHHHHHcCCEEEEEcccccCCcCc----chhhHH-hCCCcc--------eeeehhhh-c-CCcccEEEE---EHH
Confidence 99999999999999999999998774421 111111 112221 34779999 5 789999998 688
Q ss_pred HHHHH
Q psy13922 259 GVKAM 263 (509)
Q Consensus 259 ~~~~~ 263 (509)
++++.
T Consensus 267 ~i~~~ 271 (431)
T PRK06209 267 EYMEL 271 (431)
T ss_pred HHHhh
Confidence 88876
No 340
>PRK15029 arginine decarboxylase; Provisional
Probab=99.46 E-value=2.1e-11 Score=133.52 Aligned_cols=206 Identities=12% Similarity=0.090 Sum_probs=137.5
Q ss_pred CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEE
Q psy13922 50 TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQI 129 (509)
Q Consensus 50 ~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~ 129 (509)
.|..-..+..+..|+.+ | .....++++|+|.++..++.+++++|| .|+++-.||.+..+.+...|++++
T Consensus 202 ~p~G~I~eAq~~aA~~f----g---A~~t~FlvNGST~gn~a~i~a~~~~gd----~Vlv~RN~HKSv~~al~L~ga~Pv 270 (755)
T PRK15029 202 DHTGAFGESEKYAARVF----G---ADRSWSVVVGTSGSNRTIMQACMTDND----VVVVDRNCHKSIEQGLILTGAKPV 270 (755)
T ss_pred CCCcHHHHHHHHHHHHh----C---CCcEEEEeCChhHHHHHHHHHhcCCCC----EEEeecccHHHHHHHHHHcCCeEE
Confidence 34444455666666666 3 235688999999999999999999999 999999999999999999999999
Q ss_pred EEecCCCCCC----CCC-----HHHHHHHHHhhhc-----cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEE
Q psy13922 130 GYYLDESKQW----GLP-----ISELERSITEARK-----HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195 (509)
Q Consensus 130 ~v~~~~~~~~----~~d-----~~~L~~~i~~~~~-----~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI 195 (509)
.++..- ..| .++ ++.+++++++... ..+++++++++|+. -|++++ +++|+++|+++++.|+
T Consensus 271 yl~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~ll 345 (755)
T PRK15029 271 YMVPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLH 345 (755)
T ss_pred Eecccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEE
Confidence 986432 122 234 8899999976421 13455899998877 489977 8999999999999999
Q ss_pred EcccCCc-ccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH-HH-HHHHHHhhh--c
Q psy13922 196 ADEVYQD-NVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP-GV-KAMLHKSIS--A 270 (509)
Q Consensus 196 ~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~-~~-~~~l~~~~~--~ 270 (509)
+||||+. |.+.+. ++....+..+... ..+.+++++.|.+|++ |++.-|.++-+..+. .+ .+++..... .
T Consensus 346 vDEAhGah~~F~~~--~p~~sa~~~~~~~-~~Gad~~vvqStHKtL---~alTQaS~LHv~~~~~~id~~r~~~~l~~~q 419 (755)
T PRK15029 346 FDEAWYGYARFNPI--YADHYAMRGEPGD-HNGPTVFATHSTHKLL---NALSQASYIHVREGRGAINFSRFNQAYMMHA 419 (755)
T ss_pred EECccccccccCcc--ccccccccccccc-cCCCceEEEEchhhcc---cchhhhhhheeCCCccccCHHHHHHHHHHHc
Confidence 9999954 334321 2111111000000 0122368888999997 567655554333331 11 244544433 2
Q ss_pred ccCcchh
Q psy13922 271 MLCPTVL 277 (509)
Q Consensus 271 ~~~~~~~ 277 (509)
+++|+.+
T Consensus 420 STSPSY~ 426 (755)
T PRK15029 420 TTSPLYA 426 (755)
T ss_pred CCCcHHH
Confidence 4455554
No 341
>PLN02271 serine hydroxymethyltransferase
Probab=99.46 E-value=4.8e-11 Score=125.01 Aligned_cols=304 Identities=12% Similarity=0.064 Sum_probs=177.6
Q ss_pred CCCCCCHHHHHHHHHHHhcccC--CCccc-CCCCcchHHHHHHHHHHHhhhcCCCC-CC-CcEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRG--QSVGS-YTDSPGIEIIRRHVAQYISRRDGQPA-DW-QDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~--~~~~~-Y~~~~g~~~lr~~va~~l~~~~g~~~-~~-~~i~~t~G~~~al~~~~~~l 96 (509)
..+..++.+++++-..+...-. ....+ |+......++.....+...+.+|.+. .. -||-.-+| +.|...++.+|
T Consensus 156 SEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SG-s~AN~aV~~AL 234 (586)
T PLN02271 156 SENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSC-TSANFAVYTGL 234 (586)
T ss_pred ccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccH-HHHHHHHHHHh
Confidence 4555577777777666655211 11111 34344444555545555555555332 11 46666655 56888999999
Q ss_pred hcCCCCCCCeEEEcCCCChhHHHHH---------HhcCC--EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe
Q psy13922 97 IEDVDGKKPGVLIPIPQYPLYSASL---------AEFNM--EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII 165 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~~~~~~---------~~~g~--~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~ 165 (509)
++||| +|+..+..|.++.... ...|. ++++++.+++ +..+|.+++++..... ++|+|++.
T Consensus 235 l~PGD----~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~----rPKLII~g 305 (586)
T PLN02271 235 LLPGD----RIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDF----RPKILICG 305 (586)
T ss_pred cCCCC----EEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhc----CCeEEEEC
Confidence 99999 9999887777654322 23354 4445556543 3479999999855444 89999997
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 166 NPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 166 ~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
.-.|| ..++ +++|.++|+++|+++++|.++.......+....++. +.+++ ..|.+|++. |
T Consensus 306 ~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-----------~aDvv-t~TTHKtLr---G 365 (586)
T PLN02271 306 GSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-----------YCDIV-TSTTHKSLR---G 365 (586)
T ss_pred chhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-----------CCcEE-EeCCcccCC---C
Confidence 77777 4555 888899999999999999999775543331111111 22344 558899985 4
Q ss_pred CeeEEEeeecCCH-------------------HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcc
Q psy13922 246 LRGGYSEVINLDP-------------------GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGC 306 (509)
Q Consensus 246 lr~G~v~~~~~~~-------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (509)
=|.|.+.+ .+. ++.+++.+.........+. .
T Consensus 366 PrGG~I~~--r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGph-------------------n--------- 415 (586)
T PLN02271 366 PRGGIIFY--RKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPH-------------------N--------- 415 (586)
T ss_pred CCceEEEe--cccccccccCCccccccccccHHHHHHhhcccCCccccChh-------------------H---------
Confidence 45577763 221 2333332222111100100 0
Q ss_pred cCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEEeecCCCCHHHHHH
Q psy13922 307 RGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYAFPQMKLPAKAIAK 385 (509)
Q Consensus 307 ~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~ 385 (509)
...++++.++. +-...+.....+.+.++...|.+.|.+. |++++. ...+-.++++++
T Consensus 416 ----~~IAalAvalk---------ea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl~-------- 473 (586)
T PLN02271 416 ----NHIAALAIALK---------QVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLWDLT-------- 473 (586)
T ss_pred ----HHHHHHHHHHH---------HHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeeecCc--------
Confidence 02233333322 0011113556677778888888888887 888763 334556677775
Q ss_pred HhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 386 AKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 386 ~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
..|+. -..+.++|++.||.+.-
T Consensus 474 --~~g~~--G~~ae~~Le~~~I~~Nk 495 (586)
T PLN02271 474 --TLGLT--GKNYEKVCEMCHITLNK 495 (586)
T ss_pred --ccCCC--HHHHHHHHHHcCeEecc
Confidence 11322 23378999999998854
No 342
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.45 E-value=2.5e-12 Score=131.67 Aligned_cols=204 Identities=15% Similarity=0.136 Sum_probs=131.7
Q ss_pred CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEE
Q psy13922 50 TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQI 129 (509)
Q Consensus 50 ~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~ 129 (509)
.|..-..+..+..|+.++ .....++++|+|.++..++.+++++|| .|+++-.||.+....+...|++++
T Consensus 63 ~p~G~I~eAe~~aA~~fG-------Ad~t~flvnGsT~g~~a~i~a~~~~gd----~VLv~RN~HkSv~~alil~ga~Pv 131 (417)
T PF01276_consen 63 DPEGIIKEAEELAARAFG-------ADKTFFLVNGSTSGNQAMIMALCRPGD----KVLVDRNCHKSVYNALILSGAIPV 131 (417)
T ss_dssp TTBTHHHHHHHHHHHHHT-------ESEEEEESSHHHHHHHHHHHHHTTTTC----EEEEETT--HHHHHHHHHHTEEEE
T ss_pred CCccHHHHHHHHHHHhcC-------CCeEEEEecCchHHHHHHHHHhcCCCC----EEEEcCCcHHHHHHHHHHcCCeEE
Confidence 344444566777777773 234688899999999999999999999 999999999999999999999999
Q ss_pred EEecCCCCCCC----CCH-----HHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 130 GYYLDESKQWG----LPI-----SELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 130 ~v~~~~~~~~~----~d~-----~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
.++.. ...++ +++ +.+++.+++......+++++|++|+. -|++++ +++|+++|+++++.|++||||
T Consensus 132 yi~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAh 206 (417)
T PF01276_consen 132 YIPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAH 206 (417)
T ss_dssp EEEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT
T ss_pred EecCC-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccc
Confidence 99765 32332 455 89999998753211245599998877 499977 999999999999999999998
Q ss_pred Ccc-cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH-HHHHHHHHhhh--cccCcch
Q psy13922 201 QDN-VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP-GVKAMLHKSIS--AMLCPTV 276 (509)
Q Consensus 201 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~-~~~~~l~~~~~--~~~~~~~ 276 (509)
+.. .|. . -+.+...+..+ ..++..++++.|.+|++ +++.-+.++-+..+. --.+++.+... .+++|+.
T Consensus 207 Gah~~F~-~-lp~~a~~~gad---~~~~~~~~vvqS~HKtL---~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY 278 (417)
T PF01276_consen 207 GAHFGFH-P-LPRSALALGAD---RPNDPGIIVVQSTHKTL---PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSY 278 (417)
T ss_dssp -TTGGCS-G-GGTTCSSTTSS----CTSBEEEEEEEHHHHS---SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--H
T ss_pred cccccCC-C-CccchhhccCc---cccccceeeeechhhcc---cccccceEEEecCCCcccHHHHHHHHHHHcCCChHH
Confidence 653 222 1 11111111111 12244578899999997 566644444334443 23445544333 3455555
Q ss_pred h
Q psy13922 277 L 277 (509)
Q Consensus 277 ~ 277 (509)
+
T Consensus 279 ~ 279 (417)
T PF01276_consen 279 P 279 (417)
T ss_dssp H
T ss_pred H
Confidence 5
No 343
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.44 E-value=3.1e-11 Score=126.71 Aligned_cols=175 Identities=10% Similarity=0.046 Sum_probs=102.7
Q ss_pred CHHHH--HHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC-----
Q psy13922 27 PDDVK--QRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----- 99 (509)
Q Consensus 27 p~~v~--~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----- 99 (509)
.|.|. +++.+++.+....... +. ... .+....+++.+.+..+ .-..+.++++++++||++.+++..+.-
T Consensus 56 ~p~v~~~~ai~~q~~~~~~~~~~-~~-~~~-~~~~~~l~~~l~~~~~-~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~ 131 (431)
T TIGR03251 56 HPALVDDLAFRARLGAAAVNKPS-NS-DVY-TVAMARFVDTFARVLG-DPALPHLFFIEGGALAVENALKTAFDWKSRHN 131 (431)
T ss_pred ChhhhHHHHHHHHHHHhhhcccc-cC-CCC-CHHHHHHHHHHHHhcC-CCCcCEEEEeCCcHHHHHHHHHHHHHHhhcch
Confidence 46777 7888887762110111 10 011 2222333333332211 112368999999999999999987532
Q ss_pred ---CCC--CCCeEEEcCCCChhHHHHHHhc-CCE-EE--EEec-------CCCC--CC-----C-------CCHHHHHHH
Q psy13922 100 ---VDG--KKPGVLIPIPQYPLYSASLAEF-NME-QI--GYYL-------DESK--QW-----G-------LPISELERS 149 (509)
Q Consensus 100 ---gd~--~~~~Vlv~~p~y~~~~~~~~~~-g~~-~~--~v~~-------~~~~--~~-----~-------~d~~~L~~~ 149 (509)
|.+ ++..|+...-+|++....+... |.. .. ..|. .+.. .+ . -+++.+++.
T Consensus 132 ~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 211 (431)
T TIGR03251 132 QARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAA 211 (431)
T ss_pred hhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHH
Confidence 211 1357999999999876544322 211 00 0110 0000 00 0 123445555
Q ss_pred HHhhhccCCceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccC
Q psy13922 150 ITEARKHCNPRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207 (509)
Q Consensus 150 i~~~~~~~~~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~ 207 (509)
+... ..++.+|++...+.-.|. ..+++.+++|.++|++||+++|+||++.+|..+|
T Consensus 212 ~~~~--~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG 268 (431)
T TIGR03251 212 FAER--PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTG 268 (431)
T ss_pred HHhC--CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccc
Confidence 5432 127889888766666776 5788999999999999999999999999886653
No 344
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.43 E-value=2.5e-11 Score=127.19 Aligned_cols=204 Identities=12% Similarity=0.135 Sum_probs=136.7
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCC-----CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTD-----SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~-----~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
+.+.+|+.+++++.+.+.... ... |.- ..-...+++.++++++ .+..+++++++.|+..++..
T Consensus 89 g~s~l~~~vieAv~~~~~~y~--~l~-~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~- 156 (454)
T TIGR00474 89 GRAPLAEEAIEAVTDAARGYS--NLE-YDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNT- 156 (454)
T ss_pred CCCCCCHHHHHHHHHHHhccc--chh-ccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHH-
Confidence 667789999999999988722 111 211 1123567888888873 23456677788899888855
Q ss_pred hcCCCCCCCeEEEcCCCChh------HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 97 IEDVDGKKPGVLIPIPQYPL------YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
+.+|+ +|+++...|.. +...++..|++++.++.+. ..+++.+++++++ ++++|++.+++|+
T Consensus 157 l~~Gd----eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~-----~T~lv~~~h~sN~ 223 (454)
T TIGR00474 157 LAKGK----EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITE-----NTALLLKVHTSNY 223 (454)
T ss_pred hCCcC----EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCc-----CCEEEEEEccCcc
Confidence 56777 99999876432 2345677899999987642 3478999999987 7999999999999
Q ss_pred C--CC--CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccC--CCcccc-HHHHHHHhCCCCCCceeEEEEecccccCCC
Q psy13922 171 T--GQ--VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE--GSKFYS-FKKVLVEMGEPYKSMELASFMSCSKGYMGE 243 (509)
Q Consensus 171 t--G~--~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~ 243 (509)
+ |. ..+ +++|+++|+++|+++++|.+.+.+...+ +....+ +... .+. +.+ ++++|.+|.+.|
T Consensus 224 ~~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~-~~~-----GaD-iv~fSg~K~LgG- 292 (454)
T TIGR00474 224 RIVGFTEEVS---IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEV-IAA-----GVD-LVTFSGDKLLGG- 292 (454)
T ss_pred cccCCCCCCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccH-hHc-----CCC-EEEecCccccCC-
Confidence 5 63 545 9999999999999999998644321100 000111 1111 111 222 445588999833
Q ss_pred CCCeeEEEeeecCCHHHHHHHHH
Q psy13922 244 CGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 244 ~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
| ..|+++ +++++++++++
T Consensus 293 p--~~G~i~---g~~~~i~~l~~ 310 (454)
T TIGR00474 293 P--QAGIIV---GKKELIERLKK 310 (454)
T ss_pred C--eEEEEE---ECHHHHHhhhh
Confidence 3 478887 67788876653
No 345
>PLN02263 serine decarboxylase
Probab=99.43 E-value=2.7e-10 Score=118.56 Aligned_cols=180 Identities=12% Similarity=0.026 Sum_probs=135.1
Q ss_pred chHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEec
Q psy13922 54 GIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYL 133 (509)
Q Consensus 54 g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 133 (509)
+..++.+.+-+|+.+.+|.+-..-.-++|+|+|+++-.++.+.++... +..|+++.-.|.++..++..+|.+++.||.
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~--~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~ 207 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFP--DGILYASRESHYSVFKAARMYRMECVKVDT 207 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcC--CcEEEEcCCccHHHHHHHHhcCCcceEecc
Confidence 458899999999999888542111358899999999998888776321 226888999999999999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCc-----EEEEcccCCcccccCC
Q psy13922 134 DESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKL-----FLFADEVYQDNVYAEG 208 (509)
Q Consensus 134 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i-----~lI~Deay~~~~~~~~ 208 (509)
++. +.+|++.|++.|.+... ++-+|+.+.+.-++|.+ +++++|.++|+++|+ |+.+|.+|+++...--
T Consensus 208 d~~--g~mD~~aL~~aI~~d~~--~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~ 280 (470)
T PLN02263 208 LVS--GEIDCADFKAKLLANKD--KPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFV 280 (470)
T ss_pred CCC--CcCcHHHHHHHHHhCCC--CcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhc
Confidence 754 58999999999976311 25556668889999999 669999999999996 9999999988754110
Q ss_pred CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 209 SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
... +..... ...+.|++ +.+|.. | .-...|.+++
T Consensus 281 -~~~------~~~df~-~~vDSIsv-D~HK~l-~-~P~~cgvll~ 314 (470)
T PLN02263 281 -KRA------PKVTFK-KPIGSVSV-SGHKFV-G-CPMPCGVQIT 314 (470)
T ss_pred -ccc------cccCCC-cCccEEEE-CCcccc-C-CCcCEEEEEE
Confidence 000 001100 02457877 889998 4 6678898875
No 346
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.42 E-value=2e-10 Score=124.84 Aligned_cols=177 Identities=15% Similarity=0.143 Sum_probs=121.7
Q ss_pred CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH-HHhcCCEEEE
Q psy13922 52 SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS-LAEFNMEQIG 130 (509)
Q Consensus 52 ~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~-~~~~g~~~~~ 130 (509)
..-..+..+..|+.+ | ....-++++|+|.++..++.+++.+|| .||+.-.||-+..+. +...|++++.
T Consensus 173 eG~i~eAq~~AA~~f----g---Ad~tyFlvNGTS~gn~a~i~a~~~~Gd----~VLvdRN~HKSv~hgaLiLsGa~PVY 241 (720)
T PRK13578 173 EGAAKDAQKHAAKVF----N---ADKTYFVLNGTSASNKVVTNALLTPGD----LVLFDRNNHKSNHHGALIQAGATPVY 241 (720)
T ss_pred ChHHHHHHHHHHHHh----C---CCceEEEeCChhHHHHHHHHHhcCCCC----EEEeecccHHHHHHHHHHHcCCeEEE
Confidence 333445666666666 3 234678899999999999999999999 999999999999885 8899999999
Q ss_pred EecCCCCCCC----CCH-----HHHHHHHHhhh-c---c-CCceEEEEeCCCCCCCCCCCHHHHHHHHHH-HHHCCcEEE
Q psy13922 131 YYLDESKQWG----LPI-----SELERSITEAR-K---H-CNPRAIVIINPGNPTGQVLTKENIQDIIKF-AHREKLFLF 195 (509)
Q Consensus 131 v~~~~~~~~~----~d~-----~~L~~~i~~~~-~---~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~i-a~~~~i~lI 195 (509)
+....+ .|+ ++. +.+++.+++.. + . ...++++|++|+. .|++++ +++|+++ ++.++ .|+
T Consensus 242 l~P~~n-~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~ll 315 (720)
T PRK13578 242 LETARN-PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YIL 315 (720)
T ss_pred eecccc-ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEE
Confidence 875442 233 354 44888887741 1 1 1258899988876 599988 7888887 67777 999
Q ss_pred EcccCCcc-cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 196 ADEVYQDN-VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 196 ~Deay~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
+||+|... .|.+. +..+....-+.+.+ +.-++++.|.+|.+ +++.-+.++
T Consensus 316 vDEAhgah~~F~p~--~~~~p~~al~~GaD--~p~i~v~QStHKtL---~alTQaS~L 366 (720)
T PRK13578 316 FDSAWVGYEQFIPM--MADCSPLLLELNEN--DPGIFVTQSVHKQQ---AGFSQTSQI 366 (720)
T ss_pred EeCcchhhhccCcc--cccCChhhhhcCCC--CCCeEEEEChhhcc---hhhhhHhhh
Confidence 99999653 33321 11111111233333 23378889999998 456544433
No 347
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.41 E-value=8.9e-11 Score=123.39 Aligned_cols=175 Identities=10% Similarity=-0.042 Sum_probs=104.3
Q ss_pred CHHHHHHHHHH-HhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC------
Q psy13922 27 PDDVKQRAQAV-LDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED------ 99 (509)
Q Consensus 27 p~~v~~a~~~~-l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~------ 99 (509)
+|.|.+++.++ ....-.. ...|.. ....++-+.+++.+.+... -.-+.++++++++||++.+++.....
T Consensus 76 ~p~i~~Ai~~q~~~~~l~~-~~~~~~-~~~~~la~~l~~~l~~~~p--~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r 151 (464)
T TIGR00699 76 NPALLKAAQSPEMATTLIN-RPALGN-FPSKDWAKILKEGILKVAP--KGQDQVWTGMSGSDANELAFKAAFMYYRSKQR 151 (464)
T ss_pred CHHHHHHHHHHHHHHhhcc-cccCCc-HHHHHHHHHHHHhHHhhCC--CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCC
Confidence 68899998874 3321111 111221 1113344444432222211 12358999999999999999987421
Q ss_pred C-------------------CCCCCeEEEcCCCChhHHHHHHhc-CCE-----------EEEEecCCC-CCCC-------
Q psy13922 100 V-------------------DGKKPGVLIPIPQYPLYSASLAEF-NME-----------QIGYYLDES-KQWG------- 140 (509)
Q Consensus 100 g-------------------d~~~~~Vlv~~p~y~~~~~~~~~~-g~~-----------~~~v~~~~~-~~~~------- 140 (509)
+ ++++..||....+|++....+... |.. +..+|.... ..+.
T Consensus 152 ~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~ 231 (464)
T TIGR00699 152 GYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENA 231 (464)
T ss_pred CcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccch
Confidence 0 001337999999999876554332 211 111111100 0000
Q ss_pred ----CCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccC
Q psy13922 141 ----LPISELERSITEARKHCNPRAIVIINPGNPTGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207 (509)
Q Consensus 141 ----~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~ 207 (509)
-+++.+++.++... .++.+|++.......|... +++.+++|.++|++||+++|.||++..|..+|
T Consensus 232 ~~~~~~l~~l~~~l~~~~--~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG 301 (464)
T TIGR00699 232 KEEQRCLEEVEDLIKKWH--KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATG 301 (464)
T ss_pred hHHHHHHHHHHHHHHhcC--CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCc
Confidence 13556777776421 2588888876666678754 79999999999999999999999999886643
No 348
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.40 E-value=2.6e-10 Score=116.37 Aligned_cols=354 Identities=16% Similarity=0.137 Sum_probs=209.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-CCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-DVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~~~~ 105 (509)
.+..++++.. +.-. |+.+.....|.+.+++++. .+.++.|..++.+-..+++.+++ +|+
T Consensus 56 S~~m~aAM~~-------GDD~-Y~gdpSv~~Lee~vael~G--------~E~alpthqGRgaE~Il~~~~~~~~g~---- 115 (467)
T TIGR02617 56 TQSMQAAMMR-------GDEA-YSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQ---- 115 (467)
T ss_pred CHHHHHHHHc-------CCcc-cccCchHHHHHHHHHHHhC--------CceEEECCCCchHHHHHHHhhcccccc----
Confidence 4556666654 2222 8777777999999999983 45688887778999999999988 555
Q ss_pred eEEEcC--------CCChhHHHHHHhcCCEEEEEecC--------CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 106 GVLIPI--------PQYPLYSASLAEFNMEQIGYYLD--------ESKQWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 106 ~Vlv~~--------p~y~~~~~~~~~~g~~~~~v~~~--------~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
.+++.. -.|......+...|+.+..++.+ ...+..+|++.|+++|++.... ++..+.+.--+|
T Consensus 116 e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~-~i~~v~~tlt~N 194 (467)
T TIGR02617 116 EKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN-NVPYIVATITCN 194 (467)
T ss_pred cccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC-CceeeeeeEEEe
Confidence 555332 22333345677889988876532 1112368999999999864211 344444322234
Q ss_pred -CCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCc-ccc-----cCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 170 -PTGQVLTKENIQDIIKFAHREKLFLFADEVYQD-NVY-----AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 170 -PtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
-.|+++|.+.++++.++|++||+.++.|.+=.. ..+ +......++.++..++.. ..+.+++ |+||.+ |
T Consensus 195 ~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~---~aDsvt~-slsKgl-g 269 (467)
T TIGR02617 195 SAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYK---YADMLAM-SAKKDA-M 269 (467)
T ss_pred cCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhc---cCCEEEE-EcCCCC-C
Confidence 357899999999999999999999999975211 111 111134667777655543 3347777 999976 4
Q ss_pred CCCCeeEEEeeecCCH---HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcc
Q psy13922 243 ECGLRGGYSEVINLDP---GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCV 319 (509)
Q Consensus 243 ~~Glr~G~v~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 319 (509)
.++|.+++ +.++ ++..+++...-.+-+..+.|..+.. -..|++..
T Consensus 270 ---ApvGg~La-g~d~~~~~l~~~~~~~~i~~EGf~tYGGlagr----------------------------d~ea~a~G 317 (467)
T TIGR02617 270 ---VPMGGLLC-FKDDSFFDVYTECRTLCVVQEGFPTYGGLEGG----------------------------AMERLAVG 317 (467)
T ss_pred ---CcccceEE-ecchhHHHHHHHHHhhcccccCCcCcCchhHH----------------------------HHHHHHhh
Confidence 46666653 3566 4444444433333344444333321 23333333
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCC--CCHHHHHHHhhcCCCCcHHH
Q psy13922 320 VNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMK--LPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~~~ 397 (509)
+. +.. -+.....-....++|.+.|.+. |+.+.. .||--++++.. +|. +.. ..-+...+
T Consensus 318 l~---------e~~---~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~Gghav~iDa~~~lph-----ip~-~~fpa~al 377 (467)
T TIGR02617 318 LY---------DGM---NLDWLAYRINQVQYLVNGLEEI-GVVCQQ-AGGHAAFVDAGKLLPH-----IPA-DQFPAHAL 377 (467)
T ss_pred hh---------hcc---cHHHHHHHHHHHHHHHHHHHhC-CCcEEe-cCccEEEEehhhhCCC-----CCh-hhCcHHHH
Confidence 32 111 1222233334456777777777 888877 88877776653 111 000 11245556
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
+.++..+.||-..--..+... .. +..+....+.--
T Consensus 378 ~~~ly~~~GiR~~e~G~~~~~---------------------------rd------------------~~~~~~~~~~~e 412 (467)
T TIGR02617 378 ACELYKVAGIRAVEIGSLLLG---------------------------RD------------------PKTGKQLPCPAE 412 (467)
T ss_pred HHHHHHHcCcceEeecceecc---------------------------cC------------------CCCCccCCCccc
Confidence 778888889865432222110 00 111111112223
Q ss_pred eEEEEee---cChHHHHHHHHHHHHHHHH
Q psy13922 478 HFRTTIL---PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 478 ~~Rls~~---~~~~~i~~~~~~l~~~~~~ 503 (509)
.+||.+- -|.+.++-.+++|..+.++
T Consensus 413 l~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 413 LLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred eeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 7999988 5888898888888888764
No 349
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.39 E-value=7.8e-11 Score=121.08 Aligned_cols=196 Identities=16% Similarity=0.194 Sum_probs=136.5
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCCCC-----CCcEEEeCCHHHHHHHHHHHhhc--------CCC--CCCCeEEEcCCC
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQPAD-----WQDVILSAGASDGIKSVLKLLIE--------DVD--GKKPGVLIPIPQ 113 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~--------~gd--~~~~~Vlv~~p~ 113 (509)
|.......++.+.+.+++.+.+|.+.. ...-++|+|+|+++..++.+.++ .+. ..+..|++++-.
T Consensus 71 ~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a 150 (373)
T PF00282_consen 71 WEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA 150 (373)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS
T ss_pred cccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc
Confidence 555566789999999999999887621 24678999999999888766542 121 012357777778
Q ss_pred ChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCce-EEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCc
Q psy13922 114 YPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPR-AIVIINPGNPTGQVLTKENIQDIIKFAHREKL 192 (509)
Q Consensus 114 y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~-~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i 192 (509)
|.+...++..+|..++.||.+++ +.+|++.|++.+++......+. +|+.+.....+|.+ +++++|+++|+++|+
T Consensus 151 H~S~~Kaa~~lGlg~~~I~~~~~--~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~---D~l~~i~~i~~~~~~ 225 (373)
T PF00282_consen 151 HYSIEKAARILGLGVRKIPTDED--GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI---DPLEEIADICEKYNI 225 (373)
T ss_dssp -THHHHHHHHTTSEEEEE-BBTT--SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB----SHHHHHHHHHHCT-
T ss_pred ccHHHHhcceeeeEEEEecCCcc--hhhhHHHhhhhhcccccccccceeeeccCCCcccccc---cCHHHHhhhccccce
Confidence 99999999999999999999874 5899999999998754322333 55567889999999 779999999999999
Q ss_pred EEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHH
Q psy13922 193 FLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKA 262 (509)
Q Consensus 193 ~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~ 262 (509)
|+.+|.+|+...+-.. ..... ...+ +..+.|.+ +++|.+ + .-...|++++ .++....
T Consensus 226 wlHVDaA~gg~~~~~~-~~~~~---~~gi----~~adSit~-d~HK~l-~-~P~~~~~~l~--r~~~~l~ 282 (373)
T PF00282_consen 226 WLHVDAAYGGSALLSP-EYRHL---LFGI----ERADSITI-DPHKWL-G-VPYGCGVLLV--RDKSDLR 282 (373)
T ss_dssp EEEEEETTGGGGGGHC-TTGGG---GTTG----GGESEEEE-ETTTTT-S--SSS-EEEEE--SSGGGHH
T ss_pred eeeecccccccccccc-ccccc---cccc----cccccccc-chhhhh-c-CCccceeEEe--ecccchH
Confidence 9999999988332111 11111 1111 13457877 889998 5 5568888875 7776544
No 350
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.39 E-value=2.3e-10 Score=127.20 Aligned_cols=217 Identities=12% Similarity=0.039 Sum_probs=134.5
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-----CC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-----DV 100 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~g 100 (509)
-.+.+.+++.+++.+.. +. ....-..+....+|+.|.+..+.+ .-+.|++++++++|++.+++..++ .|
T Consensus 383 ~~p~I~~Ai~~Qa~rl~---hv--~~~~~~hepa~~LAe~L~~~~~~~-~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G 456 (817)
T PLN02974 383 LQPELARAVAYAAGRYG---HV--MFPENVHEPALRAAELLLGGPGKG-WASRVFFSDNGSTAIEVALKMAFRKFIVDHG 456 (817)
T ss_pred CCHHHHHHHHHHHhhCC---cc--ccCccCCHHHHHHHHHHHhccCCC-CCCEEEECCchHHHHHHHHHHHHHHHHHhcC
Confidence 36889999999998832 11 111111344555666664421100 135899999999999999987732 12
Q ss_pred CC------------CCCeEEEcCCCChhHHHHHHhcCCEE-------EE--------E--ecC--CCC--------C---
Q psy13922 101 DG------------KKPGVLIPIPQYPLYSASLAEFNMEQ-------IG--------Y--YLD--ESK--------Q--- 138 (509)
Q Consensus 101 d~------------~~~~Vlv~~p~y~~~~~~~~~~g~~~-------~~--------v--~~~--~~~--------~--- 138 (509)
.+ .+.+||....+|++....+...+... .+ + |.. ..+ .
T Consensus 457 ~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~ 536 (817)
T PLN02974 457 FLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSS 536 (817)
T ss_pred CCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccc
Confidence 11 25579999999998654444332210 00 1 000 000 0
Q ss_pred --------CC-----CC------------HHHHHHHHHhhh---ccCCceEEEEeC-CCCCCCC-CCCHHHHHHHHHHHH
Q psy13922 139 --------WG-----LP------------ISELERSITEAR---KHCNPRAIVIIN-PGNPTGQ-VLTKENIQDIIKFAH 188 (509)
Q Consensus 139 --------~~-----~d------------~~~L~~~i~~~~---~~~~~~~ivi~~-p~NPtG~-~~s~~~l~~l~~ia~ 188 (509)
|. +| .+.+++.+++.. ...++.+||+.. .+.-.|. ..+++.+++|.++|+
T Consensus 537 ~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~ 616 (817)
T PLN02974 537 GLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCR 616 (817)
T ss_pred cccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHH
Confidence 00 00 245666665311 113677888765 3677787 567899999999999
Q ss_pred HCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-CeeEEEeeecCCHHHHHHHH
Q psy13922 189 REKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG-LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 189 ~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G-lr~G~v~~~~~~~~~~~~l~ 265 (509)
+||+++|.||++.+|...|. ......+ ++.++ +-+++|.++ .| +++|.++ .++++.+.+.
T Consensus 617 ~~gilLI~DEV~TGfGRtG~--~fa~e~~--gv~PD--------Ii~~gKgLt--gG~~Plaa~l---~~~~I~~~f~ 677 (817)
T PLN02974 617 SRKIPVIFDEVFTGLWRLGV--ESAWELL--GCKPD--------IACYAKLLT--GGLVPLAATL---ATEEVFEAFR 677 (817)
T ss_pred HhCCEEEEeecccCCCcccc--hhhHHhc--CCCCC--------EEeeccccc--CCCCccEEEE---EcHHHHHhhc
Confidence 99999999999999977652 3222221 22222 346699994 79 6999998 7999999885
No 351
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.37 E-value=2.9e-10 Score=128.49 Aligned_cols=146 Identities=18% Similarity=0.216 Sum_probs=106.8
Q ss_pred cccCCC---CcchHHHHHHHHHHHhhhcCCCCCCCcEEEe-CCHHHHHHHHHHHhh----cCCCCCCCeEEEcCCCChhH
Q psy13922 46 VGSYTD---SPGIEIIRRHVAQYISRRDGQPADWQDVILS-AGASDGIKSVLKLLI----EDVDGKKPGVLIPIPQYPLY 117 (509)
Q Consensus 46 ~~~Y~~---~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t-~G~~~al~~~~~~l~----~~gd~~~~~Vlv~~p~y~~~ 117 (509)
++-|.| .+|..++...+.+++.+..|.+ ++-+. +|++++....+.+++ ++|+.+++.|+++...|...
T Consensus 528 ~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d----~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~sn 603 (954)
T PRK05367 528 LHPFAPAEQAAGYRELIDQLEAWLAEITGYD----AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTN 603 (954)
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHCCC----CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhh
Confidence 334555 3567788888888888877732 45554 455555533333333 45654566799999999888
Q ss_pred HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 118 SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 118 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
...+...|.+++.++.+.++ .+|++.|++.++... .++.+|++++|++-++...+ +++|+++|+++|+++++|
T Consensus 604 p~sa~~~G~~vv~v~~d~~G--~iD~~~L~~~i~~~~--~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VD 676 (954)
T PRK05367 604 PASAVMAGMKVVVVACDENG--NIDLDDLRAKAEEHA--DNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLD 676 (954)
T ss_pred HHHHHHCCCEEEEECCCCCC--CcCHHHHHHHHhccC--CCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEE
Confidence 88889999999999987553 789999999997521 15778888888876444444 999999999999999999
Q ss_pred ccCCc
Q psy13922 198 EVYQD 202 (509)
Q Consensus 198 eay~~ 202 (509)
.++..
T Consensus 677 gA~~~ 681 (954)
T PRK05367 677 GANMN 681 (954)
T ss_pred CcChh
Confidence 99964
No 352
>KOG1404|consensus
Probab=99.37 E-value=6e-11 Score=116.65 Aligned_cols=225 Identities=16% Similarity=0.166 Sum_probs=144.7
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
.|+|.+++.+.+... +.+...|.... ..++.++++..+- -+-..++++++++||.+++++..+.-.. .-.
T Consensus 68 hP~v~~a~~kQl~~l-~H~t~~~~~~p-i~~~Ae~L~s~~P------~~l~~vfF~nsGsEANelal~mar~Yt~--~~d 137 (442)
T KOG1404|consen 68 HPDVVAAAVKQLKKL-YHTTSGYLNPP-IHDLAEALVSKLP------GDLKVVFFVNSGSEANELALKMARLYTG--NLD 137 (442)
T ss_pred ChHHHHHHHHhhhhh-EEeeccccCCc-HHHHHHHHHHhCC------CCceEEEEecCCchHHHHHHHHHHHhcC--Cce
Confidence 477888887777553 23333454332 2667777777662 2334699999999999999887754322 115
Q ss_pred EEEcCCCChhHHHHHHhc-CCEEEEEecC-----------CC---CCCCCC---------HHHHHHHHHhhhccCCceEE
Q psy13922 107 VLIPIPQYPLYSASLAEF-NMEQIGYYLD-----------ES---KQWGLP---------ISELERSITEARKHCNPRAI 162 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~-----------~~---~~~~~d---------~~~L~~~i~~~~~~~~~~~i 162 (509)
||-...+|++.......+ |......+.. ++ +-|+=+ .+++++.+..... ..+.++
T Consensus 138 iIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~-~~vAaf 216 (442)
T KOG1404|consen 138 IIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGP-ETVAAF 216 (442)
T ss_pred EEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCC-CceeEE
Confidence 777777887755443222 2222111110 10 111111 2445555544322 246677
Q ss_pred EEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHH--HHHHhCCCCCCceeEEEEecccc
Q psy13922 163 VIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKK--VLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 163 vi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
+....+...|+ .+++-.+++..++|+++|.+.|.||++..|...| .+.++.+ +.|| +-|++|.
T Consensus 217 iaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG--~~wgfe~h~v~PD------------IvTmAKg 282 (442)
T KOG1404|consen 217 IAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG--HMWGFESHGVVPD------------IVTMAKG 282 (442)
T ss_pred EeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc--ccccccccCCCcc------------HHHHHhh
Confidence 77777887786 7888999999999999999999999999998876 4555543 2333 4488999
Q ss_pred cCCCCCCeeEEEeeecCCHHHHHHHHHhhh--cccCcchhhhhc
Q psy13922 240 YMGECGLRGGYSEVINLDPGVKAMLHKSIS--AMLCPTVLALVS 281 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~ 281 (509)
+ | .|.++|.++ -.+++.+.+.+-.+ .+.+.++.++++
T Consensus 283 i-G-nG~Pl~AVv---tt~EIa~v~~~~~~~fnTyggnP~a~av 321 (442)
T KOG1404|consen 283 I-G-NGFPLGAVV---TTPEIADVLNQKSSHFNTYGGNPVACAV 321 (442)
T ss_pred c-c-CCCcceeee---cCHHHHHHHHhccccccccCCCchhHHH
Confidence 9 7 899999998 69999999977653 334444443333
No 353
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.37 E-value=1.5e-10 Score=118.24 Aligned_cols=300 Identities=17% Similarity=0.151 Sum_probs=167.5
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCC---cccCCCCcchHHHHHHHHHHHhhhcCCCCCCC----cEEEeCCHHHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQS---VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ----DVILSAGASDGIKSVLK 94 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~---~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~----~i~~t~G~~~al~~~~~ 94 (509)
..+..++.+++++...+...-... ..-|+...-..++.+...+...+.++ .+++ +|-. -+++.|...++.
T Consensus 28 SEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~--~~~~~w~anvqp-~SGs~An~av~~ 104 (399)
T PF00464_consen 28 SENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG--AEPKEWYANVQP-HSGSQANLAVYM 104 (399)
T ss_dssp T-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE----SSHHHHHHHHHH
T ss_pred cccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC--CCcccceEEeec-CCchHHHHHHHH
Confidence 444456666666655554411110 01133344444555555555555555 3333 3333 455678889999
Q ss_pred HhhcCCCCCCCeEEEcCCCChhHHH---H--H-----HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEE
Q psy13922 95 LLIEDVDGKKPGVLIPIPQYPLYSA---S--L-----AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVI 164 (509)
Q Consensus 95 ~l~~~gd~~~~~Vlv~~p~y~~~~~---~--~-----~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi 164 (509)
+|+++|| +|+..++.+.++.. . . .....+.+.++++++ +..+|.+++++.+.+. +|++|++
T Consensus 105 aLl~pGD----~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~----kPklIi~ 175 (399)
T PF00464_consen 105 ALLKPGD----TIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEH----KPKLIIC 175 (399)
T ss_dssp HHT-TT-----EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH------SEEEE
T ss_pred HHHhhcC----cEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhc----CCCEEEE
Confidence 9999999 99988876654431 1 1 224578999998865 4689999999999988 9999998
Q ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC
Q psy13922 165 INPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC 244 (509)
Q Consensus 165 ~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~ 244 (509)
..-+.| .. -+++++.+||++.|.+|++|-++.....-++ .+++... ..+++ .+|.+|++ +
T Consensus 176 G~S~y~--~~---~d~~~~reIad~vga~l~~D~sH~~GLIa~g-~~~~P~~----------~ADvv-t~sThKtl---~ 235 (399)
T PF00464_consen 176 GASSYP--RP---IDFKRFREIADEVGAYLMADISHIAGLIAGG-LFPNPFP----------YADVV-TGSTHKTL---R 235 (399)
T ss_dssp E-SSTS--S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTT-SS--GCC----------TSSEE-EEESSGGG----
T ss_pred Cchhcc--Cc---cCHHHHHHHHHhcCcEEEecccccccceehh-eecCccc----------cceEE-Eeeccccc---c
Confidence 644443 22 3489999999999999999999854333222 1221111 22355 55889998 5
Q ss_pred CCeeEEEeeecC-------------CHHHHHHHHHhhhccc--CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCc
Q psy13922 245 GLRGGYSEVINL-------------DPGVKAMLHKSISAML--CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQ 309 (509)
Q Consensus 245 Glr~G~v~~~~~-------------~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (509)
|=|.|.+++ . ++++.+++.+...... ++...
T Consensus 236 GPrggiI~~--~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~-------------------------------- 281 (399)
T PF00464_consen 236 GPRGGIILT--NKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMH-------------------------------- 281 (399)
T ss_dssp SSS-EEEEE--S-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HH--------------------------------
T ss_pred ccCceEEEE--cCCccccCCcccccHHHHHHHhccccCCCcccCcchh--------------------------------
Confidence 667898874 3 3889999987654322 22222
Q ss_pred ccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEEeecCCCCHHHHHHHhh
Q psy13922 310 SVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYAFPQMKLPAKAIAKAKA 388 (509)
Q Consensus 310 ~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~ 388 (509)
..++++.++. +....+.++..+.+.++.+.|.+.|.+. |+++.. ...+-.+|++++-
T Consensus 282 --~iaalAval~---------ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~---------- 339 (399)
T PF00464_consen 282 --RIAALAVALK---------EALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRS---------- 339 (399)
T ss_dssp --HHHHHHHHHH---------HHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGG----------
T ss_pred --HHHHHHHHHh---------cccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEecc----------
Confidence 2222222221 1111124566777788888889999888 998873 3344566777751
Q ss_pred cCCCCcHHHHHHHHhhcCeEEec
Q psy13922 389 EGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 389 ~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
.|+ +-..+...|++.||.+..
T Consensus 340 ~~~--~g~~a~~~Le~~gI~vnk 360 (399)
T PF00464_consen 340 FGI--DGKEAEKALEEAGIIVNK 360 (399)
T ss_dssp GTS---HHHHHHHHHHTTEE-EE
T ss_pred ccc--chHHHHHHHHhcCeeecc
Confidence 122 222268899999999864
No 354
>KOG1402|consensus
Probab=99.36 E-value=5e-11 Score=114.54 Aligned_cols=255 Identities=12% Similarity=0.137 Sum_probs=163.0
Q ss_pred CCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc------
Q psy13922 25 RFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE------ 98 (509)
Q Consensus 25 ~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------ 98 (509)
+..|.+++++++..++....+-..|.... .++.+-+++++ ..+.|+-++.+.||.+.+++..++
T Consensus 75 hchpki~~aLqeq~~kLtlssrafYnd~~--~~f~~~vt~lf--------~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K 144 (427)
T KOG1402|consen 75 HCHPKIIKALQEQADKLTLSSRAFYNDVL--GEFAEYVTKLF--------GYDKVLPMNTGAEAVETACKLARKWGYRKK 144 (427)
T ss_pred CCCHHHHHHHHHHHhHhhhhhHHHhhhhH--HHHHHHHHHhc--------CcceeeecccchhHHHHHHHHHHHHHHhhc
Confidence 44689999999888874322223355443 45666666665 356777787779999999988763
Q ss_pred --CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEe----cCCC----CCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 99 --DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYY----LDES----KQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 99 --~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~----~~~~----~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
|.+ +..|+-...+|++-...+-.++-+...+. .-+. -. -=|.+.|+.+++.. +.+++++..-+
T Consensus 145 ~ip~n--ka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~-Y~d~eale~~l~~~----~vaaFivEPIQ 217 (427)
T KOG1402|consen 145 NIPKN--KAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVP-YGDAEALEVALKSP----NVAAFIVEPIQ 217 (427)
T ss_pred cCCcc--ceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeec-cCCHHHHHHHhcCC----CeeEEEeeccc
Confidence 212 22444455666643322211111110000 0000 00 01688999998874 78888888778
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCC-
Q psy13922 169 NPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGL- 246 (509)
Q Consensus 169 NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Gl- 246 (509)
...|+ +.++..+.+..++|++||+++|.||++.++..+|.--......+.|| ++.+ .|.++ .|+
T Consensus 218 GEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PD---------ivil---gKalS--GG~~ 283 (427)
T KOG1402|consen 218 GEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPD---------IVIL---GKALS--GGVY 283 (427)
T ss_pred cccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCC---------eEEE---ecccc--CCee
Confidence 99997 55667999999999999999999999999988763211122233222 5544 79996 554
Q ss_pred eeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCC
Q psy13922 247 RGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQP 325 (509)
Q Consensus 247 r~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 325 (509)
++..++ ++.+++-.+..... .+.+.+++++.+ +.++++.+.
T Consensus 284 Pvsavl---~~~~im~~~~pgeHgsTyggNpLg~~v------------------------------aiAalevi~----- 325 (427)
T KOG1402|consen 284 PVSAVL---ADDDIMLNIKPGEHGSTYGGNPLGCAV------------------------------AIAALEVIV----- 325 (427)
T ss_pred eeEEEE---ecHHHHhccCCCccccccCCChHHHHH------------------------------HHHHHHHHH-----
Confidence 888888 79999988776555 345667774444 455555442
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy13922 326 GEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIE 359 (509)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 359 (509)
-+.+.+....+-+.+...|.+++
T Consensus 326 -----------eekL~era~~lG~~l~~~L~~l~ 348 (427)
T KOG1402|consen 326 -----------EEKLVERAAKLGEILRDQLNKLQ 348 (427)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHhcc
Confidence 35566677777778888888764
No 355
>PLN02452 phosphoserine transaminase
Probab=99.35 E-value=2.9e-10 Score=116.31 Aligned_cols=305 Identities=14% Similarity=0.092 Sum_probs=174.5
Q ss_pred CCCCCCHHHHHHHHHHHhcccCC-----CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQ-----SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~-----~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
|+..+|+.|++++.+.+.+..+. ..++.++ -..++.+.+.+.+.+.++.+-+.+-+++..|+|.++++++..|
T Consensus 14 GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~--~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl 91 (365)
T PLN02452 14 GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGK--EFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNL 91 (365)
T ss_pred CCCCCCHHHHHHHHHHHhcccccCccccccCCCch--HHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhc
Confidence 66678999999998876542211 1222332 2245666666666666664323334667799999999999999
Q ss_pred hcCCCCCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCC--CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 97 IEDVDGKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQW--GLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~--~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
..+++ ++++..-...+ +...++..|...+.... +..+| .+++++++. . ++++.+.+++-.-.||
T Consensus 92 ~~~~~----~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~-----~~~~~v~~~hnETstG 159 (365)
T PLN02452 92 CKPGD----KADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--T-----PDAKFVHICANETIHG 159 (365)
T ss_pred CCCCC----eEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--C-----CCCcEEEECCCCCCCc
Confidence 98887 77766555544 45667778864443321 12222 356665421 1 2578888887788889
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
+.+++ ++++. ++++|+|.+.+... ....+..+ .+++ .|..|.+ |++| +|.++
T Consensus 160 v~~~~--~~~i~------~~~lvVDa~Ss~g~-----~pidv~~~-----------~v~~-~saqK~l-GP~G--l~~v~ 211 (365)
T PLN02452 160 VEFKD--YPDVG------NVPLVADMSSNFLS-----KPVDVSKY-----------GVIY-AGAQKNV-GPSG--VTIVI 211 (365)
T ss_pred EecCc--ccccC------CCeEEEECCccccC-----cccCHHHc-----------CEEE-Eeccccc-CCCC--eEEEE
Confidence 96442 44443 38999999887643 22333332 1444 4889999 8998 46665
Q ss_pred eecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 253 VINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
.++++++++.... ++.. ... ...++..+. .++...+..++...++ |-.
T Consensus 212 ---vr~~~l~~~~~~~-----~~~~-~~~--~~~~~~s~~-------------~TP~v~~i~~l~~aL~--------~l~ 259 (365)
T PLN02452 212 ---IRKDLIGNARPIT-----PGML-DYK--IHAENDSLY-------------NTPPCFGIYMCGLVFE--------DLL 259 (365)
T ss_pred ---EcHHHHhhcccCC-----Cchh-hHH--HHHhcCCcc-------------CChhHHHHHHHHHHHH--------HHH
Confidence 4777776653211 0000 000 000000000 0111114444444433 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCC-ee-ccC--CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeE
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNSIEGM-SC-NPV--QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGIC 408 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~-~~~--~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~ 408 (509)
-...++.+.++.+++.+++++.|++.+|+ .. ..+ .+.+.+.+.+. +....++ ..+.++++|+.
T Consensus 260 ~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~------------~~~~~~~-f~~~~~~~g~~ 326 (365)
T PLN02452 260 AQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLG------------GSELEAE-FVKEAAKAGMV 326 (365)
T ss_pred HccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcC------------CchhHHH-HHHHHHHCCCc
Confidence 11127788899999999999999987676 11 111 24444444443 1122344 46778889999
Q ss_pred EecCC
Q psy13922 409 IVPGA 413 (509)
Q Consensus 409 v~pg~ 413 (509)
..+|.
T Consensus 327 ~~~G~ 331 (365)
T PLN02452 327 QLKGH 331 (365)
T ss_pred ccCCc
Confidence 99877
No 356
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.35 E-value=2.2e-11 Score=123.91 Aligned_cols=228 Identities=12% Similarity=0.072 Sum_probs=139.7
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh------cCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI------EDV 100 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~------~~g 100 (509)
+|.+.+++.+++.... +. .......+...++++.+.+..+ -..+.+++++++++|++.+++..+ ...
T Consensus 34 ~p~i~~ai~~~~~~~~---~~--~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~ 106 (339)
T PF00202_consen 34 HPEIAEAIAEQANKLN---YV--SFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSEAVEAALKLARQYHNKRAYT 106 (339)
T ss_dssp -HHHHHHHHHHHHHCS---SC--STTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccccchhHHHHhhhcc---cc--cccceeccchhhhhhhhhhccc--cccceeeeccCchHHHHHHHHHhhccccccccc
Confidence 4899999999988832 21 1122224456666666666542 145689999999999999999987 322
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhc-------------CCEEEEEecCCCCC---CCCCHHHHHHHHHhhhccCCceEEEE
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEF-------------NMEQIGYYLDESKQ---WGLPISELERSITEARKHCNPRAIVI 164 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~-------------g~~~~~v~~~~~~~---~~~d~~~L~~~i~~~~~~~~~~~ivi 164 (509)
.+..|+....+|++........ ...+..+|.+.... +.-..+.+++.+..... .++.+|++
T Consensus 107 --~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~iaaviv 183 (339)
T PF00202_consen 107 --GRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA-DEIAAVIV 183 (339)
T ss_dssp --TTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG-GGEEEEEE
T ss_pred --CCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC-CcEEEEEE
Confidence 2558999999999855432221 11234455432100 00001123333332211 26788888
Q ss_pred eCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCC
Q psy13922 165 INPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGE 243 (509)
Q Consensus 165 ~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~ 243 (509)
...+.-.|. .++++.+++|.++|++||+++|.||++..|...+ ++..... .++.++ ++ +++|.++
T Consensus 184 EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG--~~~a~~~--~gv~PD-----iv---~~gK~l~-- 249 (339)
T PF00202_consen 184 EPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTG--KFFASEH--YGVDPD-----IV---TFGKGLG-- 249 (339)
T ss_dssp ESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTS--SSSGHHH--HTSSSS-----EE---EEEGGGG--
T ss_pred eccccccCccccccchhhehcccccccccceecccccccccccC--Cccceec--ccccCc-----cc---ccccchh--
Confidence 655555665 6678899999999999999999999999997665 2333333 233333 44 5589995
Q ss_pred CCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhc
Q psy13922 244 CGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVS 281 (509)
Q Consensus 244 ~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 281 (509)
.|+++|.++ .++++.+.+..... .+...+.+++++
T Consensus 250 gG~p~sav~---~~~~i~~~~~~~~~~~T~~g~p~~~aa 285 (339)
T PF00202_consen 250 GGLPISAVL---GSEEIMEAFQPGSHGSTFGGNPLSCAA 285 (339)
T ss_dssp TTSSEEEEE---EEHHHHTTSCTTSSTCTTTT-HHHHHH
T ss_pred hhhhccccc---ccchhhccccccccccccccchHhhhh
Confidence 789999998 68888887743322 233444443333
No 357
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.34 E-value=3.5e-10 Score=122.82 Aligned_cols=175 Identities=14% Similarity=0.086 Sum_probs=120.1
Q ss_pred CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEE
Q psy13922 51 DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIG 130 (509)
Q Consensus 51 ~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~ 130 (509)
+..-..+..+..|+.++ ....-++++|+|.++..++.+++.+|| .|++.-.||-+..+.+...|++++.
T Consensus 193 ~~G~i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd----~VLvdRN~HKSv~haLilsga~PVY 261 (714)
T PRK15400 193 HSGPHKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGS----TVLIDRNCHKSLTHLMMMSDVTPIY 261 (714)
T ss_pred CChHHHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhcCCCC----EEEeecccHHHHHHHHHHcCCeEEE
Confidence 33334456666666663 224678899999999999999999999 9999999999999999999999999
Q ss_pred EecCCCCCCC----CC-----HHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 131 YYLDESKQWG----LP-----ISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 131 v~~~~~~~~~----~d-----~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
++...+ .|+ ++ .+.+++.+++..+..++.+++|++|+. .|.+++ ++.|+++|+.++ |++||||.
T Consensus 262 l~P~rn-~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwg 334 (714)
T PRK15400 262 FRPTRN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWV 334 (714)
T ss_pred eccccc-ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccch
Confidence 865432 332 34 899999998753322344788888844 699988 677778887777 68999996
Q ss_pred cc-cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 202 DN-VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 202 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
.. .+.+. +++...+. .+.+ ++.-++++.|.+|.+ +++.-+.+
T Consensus 335 ah~~F~p~--~~~~sam~--~ga~-~~~~i~vtQStHKtL---~alTQaS~ 377 (714)
T PRK15400 335 PYTNFSPI--YEGKCGMS--GGRV-EGKVIYETQSTHKLL---AAFSQASM 377 (714)
T ss_pred hhhccCcc--cCCcChhh--cCCC-CCCceEEEEchhhcc---cchhHHhH
Confidence 54 33321 11111111 1111 012268888999998 45543333
No 358
>KOG2862|consensus
Probab=99.33 E-value=1.6e-09 Score=103.64 Aligned_cols=204 Identities=15% Similarity=0.207 Sum_probs=140.7
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCC--CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTD--SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~--~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|+..+|+.|++++..-. .++-.| .+-+.++++-+...|.. ..+.-.++...++.+.+.++..+..|
T Consensus 24 GPsnl~~~V~~A~~~~~-------lgh~sPe~~qIm~~v~egikyVFkT-----~n~~tf~isgsGh~g~E~al~N~leP 91 (385)
T KOG2862|consen 24 GPSNLSGRVQEAMSRPS-------LGHMSPEFVQIMDEVLEGIKYVFKT-----ANAQTFVISGSGHSGWEAALVNLLEP 91 (385)
T ss_pred CCcCCCHHHHHhhcCCc-------cccCCHHHHHHHHHHHHHHHHHhcc-----CCCceEEEecCCcchHHHHHHhhcCC
Confidence 45557888877763322 221122 12334455555555432 23445777777789999999999999
Q ss_pred CCCCCCeEEEcC-CCCh-hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 100 VDGKKPGVLIPI-PQYP-LYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 100 gd~~~~~Vlv~~-p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
|| .|++.. -.|. -+.+++++.|+++..++.+... ...++.+++.+..+ +++++++++-...||+..+
T Consensus 92 gd----~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~--~~~le~i~~~lsqh----~p~~vfv~hgdsSTgV~q~- 160 (385)
T KOG2862|consen 92 GD----NVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQ--AVPLEEITEKLSQH----KPKAVFVTHGDSSTGVLQD- 160 (385)
T ss_pred CC----eEEEEEechHHHHHHHHHHhhCceeeEEecCccc--CccHHHHHHHHHhc----CCceEEEEecCccccccch-
Confidence 99 877654 4443 2578889999999999776543 67899999999987 8999999988889998855
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
-++.+-.+|++|++++++|.+.+... .++ -+.+. .+++.+.+| -|.+++.+|+-+ +. .+
T Consensus 161 -~~~~~g~lc~k~~~lllVD~VaSlgg----t~F-~mDew---------gVDvaytgS-QKaL~aP~GLsi--is---fS 219 (385)
T KOG2862|consen 161 -LLAISGELCHKHEALLLVDTVASLGG----TEF-EMDEW---------GVDVAYTGS-QKALGAPAGLSI--IS---FS 219 (385)
T ss_pred -HHHHHHHHhhcCCeEEEEechhhcCC----ccc-eehhh---------cccEEEecc-hhhcCCCCCcce--ee---cC
Confidence 26677788999999999999887632 122 12221 344776655 799965566533 43 68
Q ss_pred HHHHHHHHHhhh
Q psy13922 258 PGVKAMLHKSIS 269 (509)
Q Consensus 258 ~~~~~~l~~~~~ 269 (509)
+...+++++..+
T Consensus 220 ~ka~~~~~~rK~ 231 (385)
T KOG2862|consen 220 DKALEAIRDRKT 231 (385)
T ss_pred HHHHHHHhhccC
Confidence 888888876654
No 359
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=1.4e-09 Score=107.72 Aligned_cols=300 Identities=14% Similarity=0.147 Sum_probs=187.4
Q ss_pred CCCCCCHHHHHHHHHHHhcc--cCCCccc-CCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRFPDDVKQRAQAVLDGC--RGQSVGS-YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~--~~~~~~~-Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
..+-.++.|+++.-..+.+- .+-...+ |+...-..++.+...+..++.+| .+..||-..+|+ +|...++.+|.+
T Consensus 34 SEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg--a~~anVQPhSGs-~AN~av~~All~ 110 (413)
T COG0112 34 SENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG--AEYANVQPHSGS-QANQAVYLALLQ 110 (413)
T ss_pred ccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC--CCccccCCCCch-HHHHHHHHHHcC
Confidence 55556889999987777661 1212222 45444444555555566655556 345577777777 577789999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHH---HhcC--CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASL---AEFN--MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~---~~~g--~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
||| +|+-.+-.+.++...- ...| .+++.++.+++ +..+|.|++++...+. +||+|+.-.-..| .
T Consensus 111 pGD----timgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~----kPK~ii~G~SaY~--r 179 (413)
T COG0112 111 PGD----TIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEV----KPKLIIAGGSAYS--R 179 (413)
T ss_pred CCC----eEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHh----CCCEEEECccccc--c
Confidence 999 9998876666554221 1112 57788888865 3489999999999987 9999997432222 2
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
.+ +++++.+||.+-|.++++|-+|.....-++ .+++... ..+++ ..|.+|++ .|=|.|.+++
T Consensus 180 ~i---d~~~~reIad~VGA~L~~DmAHiaGLVA~G-~~p~P~~----------~AdvV-TtTTHKTl---rGPrGG~Il~ 241 (413)
T COG0112 180 PI---DFKRFREIADEVGAYLMVDMAHVAGLIAGG-VHPNPLP----------HADVV-TTTTHKTL---RGPRGGIILT 241 (413)
T ss_pred cc---CHHHHHHHHHHhCceEEehHHHHHHHHhcc-cCCCCCC----------ccceE-eCCcccCC---CCCCceEEEe
Confidence 23 488899999999999999999854332222 2222111 12244 56889998 5668899873
Q ss_pred ecCCHHHHHHHHHhhhccc--CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 254 INLDPGVKAMLHKSISAML--CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
.++++..++.+...+.. ++..-..++ ...++..++. .
T Consensus 242 --~~eel~kkin~aVFPg~qggpl~HviAa------------------------------kaVa~~Eal~---------p 280 (413)
T COG0112 242 --NDEELAKKINSAVFPGLQGGPLMHVIAA------------------------------KAVAFKEALE---------P 280 (413)
T ss_pred --ccHHHHHHhhhhcCCccCCChHHHHHHH------------------------------HHHHHHHHcC---------h
Confidence 45688888876544222 222220000 1122333332 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 332 QFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
..++..+...++.+.|.+.|.+. |++++. ...+-.+.++++ +. |+ +-..+..+|++.||.+.
T Consensus 281 ----~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~-~~---------~~--~Gk~ae~~L~~~~It~N 343 (413)
T COG0112 281 ----EFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLR-SK---------GL--TGKKAEAALERAGITVN 343 (413)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcc-cC---------CC--CHHHHHHHHHHcCEeec
Confidence 13555667777788888888876 888874 233334556776 22 22 22227889999999886
Q ss_pred c
Q psy13922 411 P 411 (509)
Q Consensus 411 p 411 (509)
-
T Consensus 344 K 344 (413)
T COG0112 344 K 344 (413)
T ss_pred c
Confidence 4
No 360
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.32 E-value=1.5e-09 Score=105.68 Aligned_cols=318 Identities=16% Similarity=0.183 Sum_probs=202.1
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
|+..+.+..+.++..--+. |+.+.+...|..++.+.++ -+.++.|.-+..|-+.++..+.++++
T Consensus 56 GTgams~~qwaamm~GDEA--------Yagsrs~~~L~~avkdifG--------fq~~iPthQGRgAE~Il~~i~ik~~~ 119 (471)
T COG3033 56 GTGAMTDKQWAAMMRGDEA--------YAGSRSYYALADAVKDIFG--------FQYTIPTHQGRGAENILIPILIKKGE 119 (471)
T ss_pred CcccccHHHHHHHhccchh--------hcccccHHHHHHHHHHhcC--------ceeeeeccCCccHHHHHHHHHhhhcc
Confidence 5555667777777655555 9999999999999999983 36788898888899888988887654
Q ss_pred CCCC-eEEEc-CCCChhHHHHHHhcCCEEEEEecCCCC--------CCCCCHHHHHHHHHhhhccCCceEEEEe-CCCCC
Q psy13922 102 GKKP-GVLIP-IPQYPLYSASLAEFNMEQIGYYLDESK--------QWGLPISELERSITEARKHCNPRAIVII-NPGNP 170 (509)
Q Consensus 102 ~~~~-~Vlv~-~p~y~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~~~L~~~i~~~~~~~~~~~ivi~-~p~NP 170 (509)
..+. ..+++ +..|.......+.+|..+.-++.++.+ +..+|++.|++.|++.... ++..|+++ ..|.-
T Consensus 120 ~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~-nvp~I~~tiT~Nsa 198 (471)
T COG3033 120 QEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD-NVPYIVLTITNNSA 198 (471)
T ss_pred ccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc-cCcEEEEEEecccc
Confidence 2221 33344 444555666778889988888765432 2357999999999886443 56777764 56667
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEccc-CCccc-----ccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC
Q psy13922 171 TGQVLTKENIQDIIKFAHREKLFLFADEV-YQDNV-----YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC 244 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~~i~lI~Dea-y~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~ 244 (509)
.|+..|-+.+++..++|++|++.++.|.+ |.... .+.+....++.++..++-.+.+ -+++ |.-|. |+.
T Consensus 199 gGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD---~~~m-S~KKD--~lv 272 (471)
T COG3033 199 GGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD---GCTM-SAKKD--GLV 272 (471)
T ss_pred CCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh---hhee-ecccc--cee
Confidence 78999999999999999999999999975 22222 2333456778887777654322 3333 65666 454
Q ss_pred CCeeEEEeeecCCHHHH---HHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccC
Q psy13922 245 GLRGGYSEVINLDPGVK---AMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVN 321 (509)
Q Consensus 245 Glr~G~v~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 321 (509)
-+ .|++.+ .++.+. ...+...-...+-++.|.++.. ...+++..+.
T Consensus 273 nm-GGfl~~--~D~~~fDvy~~~~~~~V~~eG~~tYGgl~Gr----------------------------dmealAvGL~ 321 (471)
T COG3033 273 NM-GGFLCF--KDDSFFDVYEECRTLVVVQEGFPTYGGLAGR----------------------------DMEALAVGLR 321 (471)
T ss_pred cc-ccEEEe--cCccHHHHHHHHHhheEeeccccccCcccch----------------------------hHHHHHHHHH
Confidence 33 344443 666543 3333332223333343333211 2233333332
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCC-----CCHHHHHHHhhcCCCCcHH
Q psy13922 322 PPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMK-----LPAKAIAKAKAEGKCPSVL 396 (509)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~g~~~~~~ 396 (509)
... -..| ++... ...++|.+.|.+. |+.+..|.||--++++.. +|.+. -+.+-
T Consensus 322 e~~-----~~~y---l~~Rv----~Qv~YL~~~l~~~-GVpi~~paGGHavfvda~~~lphip~eq---------Fpaqa 379 (471)
T COG3033 322 EGV-----NFDY---LAHRV----AQVQYLADGLEEA-GVPIVQPAGGHAVFVDAGKFLPHIPAEQ---------FPAQA 379 (471)
T ss_pred Hhc-----CcHH---HHHHH----HHHHHHHHHHHhc-CCeeEecCCCceEEeehhhhcCCCChhh---------CcHHH
Confidence 100 0112 22222 3345677778877 999999999998887763 22211 24556
Q ss_pred HHHHHHhhcCeEEecCCCC
Q psy13922 397 YAFELLERTGICIVPGAGF 415 (509)
Q Consensus 397 ~~~~ll~~~gI~v~pg~~f 415 (509)
++.++..+.||-.+--..|
T Consensus 380 la~ely~e~GiRavElG~~ 398 (471)
T COG3033 380 LACELYKEAGIRAVELGSF 398 (471)
T ss_pred HHHHHHHHhCeeeeeeece
Confidence 6788899999987754433
No 361
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.32 E-value=1.4e-09 Score=120.40 Aligned_cols=146 Identities=14% Similarity=0.138 Sum_probs=104.8
Q ss_pred ccCCC---CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh----hcCCCCCCCeEEEcCCCChhHHH
Q psy13922 47 GSYTD---SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL----IEDVDGKKPGVLIPIPQYPLYSA 119 (509)
Q Consensus 47 ~~Y~~---~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l----~~~gd~~~~~Vlv~~p~y~~~~~ 119 (509)
+-|.| .+|..++-.++.+++.+..|.+.- .+.- ++++.+....+.++ ..+|++.++.|+++.-.|.....
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~--Sl~p-~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa 606 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGFDAI--CMQP-NSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA 606 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCCCeE--eecC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH
Confidence 34777 678888888888888777664322 2222 33333443333333 34566567789999888866666
Q ss_pred HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 120 SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 120 ~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
.+...|++++.++.++++ .+|+++|++.+++.. .++++|++++|++-++.. +++++|+++|+++|+++++|-+
T Consensus 607 sa~~~GieVv~Vp~D~~G--~iDle~L~a~I~~~~--~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA 679 (954)
T PRK12566 607 SAQMAGMRVVIVECDPDG--NVDLDDLKAKAAAAG--DRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGA 679 (954)
T ss_pred HHHHCCCEEEEeccCCCC--CcCHHHHHHHhhccC--CCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEee
Confidence 678889999999998654 789999999997321 168888888888766443 5699999999999999999988
Q ss_pred CCc
Q psy13922 200 YQD 202 (509)
Q Consensus 200 y~~ 202 (509)
+..
T Consensus 680 ~~~ 682 (954)
T PRK12566 680 NLN 682 (954)
T ss_pred Chh
Confidence 853
No 362
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.31 E-value=1.4e-09 Score=121.09 Aligned_cols=147 Identities=14% Similarity=0.197 Sum_probs=107.5
Q ss_pred cccCCCC---cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc----CCCCCCCeEEEcCCCChhHH
Q psy13922 46 VGSYTDS---PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE----DVDGKKPGVLIPIPQYPLYS 118 (509)
Q Consensus 46 ~~~Y~~~---~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~----~gd~~~~~Vlv~~p~y~~~~ 118 (509)
++-|.|. +|..++...+.+++.+..|.+ +--+..+|++.+-...+.+++. .|+.+++.|+++.-.|....
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd---~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD---AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC---CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 4446654 577778888888887777744 2334445555544433333322 33334668999998987777
Q ss_pred HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 119 ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 119 ~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
..++..|++++.++.+++ ..+|++.|++.++++. .++++|++++|+| +|.+-+ ++++|+++|+++|.++++|.
T Consensus 593 asa~~~G~~Vv~V~~d~~--G~iDle~L~~~i~~~~--~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDg 665 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCDQD--GNIDLVDLKNKAEQHG--DELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDG 665 (939)
T ss_pred HHHHHCCCEEEEeccCCC--CCcCHHHHHHHHhhcC--CceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEe
Confidence 778889999999998754 3899999999998521 1799999999999 788743 39999999999999999999
Q ss_pred cCCc
Q psy13922 199 VYQD 202 (509)
Q Consensus 199 ay~~ 202 (509)
++..
T Consensus 666 Aq~~ 669 (939)
T TIGR00461 666 ANMN 669 (939)
T ss_pred cChh
Confidence 9854
No 363
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.31 E-value=1.5e-09 Score=117.82 Aligned_cols=175 Identities=14% Similarity=0.028 Sum_probs=119.9
Q ss_pred CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEE
Q psy13922 51 DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIG 130 (509)
Q Consensus 51 ~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~ 130 (509)
+..-..+..+..|+.+ | ....-++++|+|.++..++.+++.+|| .|++.-.||-+..+.+...|++++.
T Consensus 193 ~~G~i~eAe~~aA~~f----g---Ad~tyfvvNGTS~~n~av~~a~~~~Gd----~VLvdRN~HKSv~~aLilsga~PVY 261 (713)
T PRK15399 193 HTGPHLEAEEYIARTF----G---AEQSYIVTNGTSTSNKIVGMYAAPAGS----TLLIDRNCHKSLAHLLMMSDVVPIW 261 (713)
T ss_pred CChHHHHHHHHHHHHh----C---CCcEEEEeCChHHHHHHHHHHhcCCCC----EEEeecccHHHHHHHHHHcCCeeEE
Confidence 3333445666666666 3 224678899999999999999999999 9999999999999999999999999
Q ss_pred EecCCCCCCC----CCH-----HHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEE-EEcccC
Q psy13922 131 YYLDESKQWG----LPI-----SELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFL-FADEVY 200 (509)
Q Consensus 131 v~~~~~~~~~----~d~-----~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~l-I~Deay 200 (509)
++...+ .|+ ++. +.+++.+++.....++++++|++|+. .|.+++ +++|+++| |+.+ ++||+|
T Consensus 262 l~P~~n-~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAh 333 (713)
T PRK15399 262 LKPTRN-ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAW 333 (713)
T ss_pred eccccc-ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccc
Confidence 865432 232 344 88999998754323557888888844 699988 66666666 5666 699999
Q ss_pred Ccc-cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 201 QDN-VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 201 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
... .|.+. +++...+.. . ..++.-++++.|.+|.+ +++.-+.++
T Consensus 334 gah~~F~p~--~~~~sam~~-~--~~aD~~i~~tQStHKtL---~alTQaS~i 378 (713)
T PRK15399 334 VPYTHFHPI--YQGKSGMSG-E--RVPGKVIFETQSTHKML---AAFSQASLI 378 (713)
T ss_pred hhhhhcCcc--cCCcChhhC-C--CCCCeeeeeeeehhccc---cccchheee
Confidence 653 23321 221111111 0 01133367788999998 566544443
No 364
>KOG1357|consensus
Probab=99.31 E-value=3.5e-11 Score=120.09 Aligned_cols=314 Identities=13% Similarity=0.081 Sum_probs=193.9
Q ss_pred chHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEec
Q psy13922 54 GIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYL 133 (509)
Q Consensus 54 g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 133 (509)
|..++.+.+.+...++.| .++.+++..| .....+.+-+|+.++. -|+-..-+|.+...-++.-|+.+.-+..
T Consensus 179 G~~~~hkelE~l~A~f~g---~e~a~vF~mG-f~TNs~~~p~l~~~gs----LIiSDelNHaSi~~GaRLSgAtiRVfkH 250 (519)
T KOG1357|consen 179 GTTEEHKELEELVARFLG---VEDAIVFSMG-FATNSMNIPSLLGKGS----LIISDELNHASLITGARLSGATTRVFRH 250 (519)
T ss_pred ccHHHHHHHHHHHHHhcC---CcceEEEecc-ccccccCcceeecCCc----ceeeccccchheeccccccCceEEEEec
Confidence 444444444444444434 4567788777 5677777888999886 7888888999998888888998887765
Q ss_pred CCCCCCCCCHHHHHHHHHhhhcc--CCc-----eEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccc
Q psy13922 134 DESKQWGLPISELERSITEARKH--CNP-----RAIVI-INPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVY 205 (509)
Q Consensus 134 ~~~~~~~~d~~~L~~~i~~~~~~--~~~-----~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~ 205 (509)
+ |+..||+.+++.... +++ +.+++ ..-...-|.+.. +.+++.++++|..+++.||+++....
T Consensus 251 N-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~ 320 (519)
T KOG1357|consen 251 N-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAM 320 (519)
T ss_pred C-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeecccccccc
Confidence 4 677777777664221 111 33443 455666777755 89999999999999999999998766
Q ss_pred cCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcc----cCcchhhhhc
Q psy13922 206 AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAM----LCPTVLALVS 281 (509)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~ 281 (509)
+.. ......+ ...++....|.+++|+|+| |..| ||+. +++++++.++...... ..++..
T Consensus 321 g~t--Grgvce~----~g~d~~dvDImMGtftKSf-ga~G---Gyia---gsk~lid~lrt~s~~~~yat~~sppv---- 383 (519)
T KOG1357|consen 321 GAT--GRGVCEY----FGVDPEDVDIMMGTFTKSF-GAAG---GYIA---GSKELIDYLRTPSPSALYATSLSPPV---- 383 (519)
T ss_pred CCC--Ccceeec----cCCCchhheeecceehhhc-cccc---ceec---CcHHHHhhhccCCCceeecccCChHH----
Confidence 321 1122221 1111122246689999999 7766 9987 8999999887543311 122222
Q ss_pred cccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy13922 282 LPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGM 361 (509)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 361 (509)
+|. ...++..+.. .......++..+.+.++..++...|.+. |+
T Consensus 384 --------------aqq-------------~~ssl~~i~G---------~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gf 426 (519)
T KOG1357|consen 384 --------------AQQ-------------ILTSVKHIMG---------EDGTNRGRQKIERLAENSRYFRWELQKM-GF 426 (519)
T ss_pred --------------HHH-------------HHHHHHhhcC---------CCcccHHHHHHHHHHhhhHHHHHhhhcC-cE
Confidence 111 1122233322 1111226777888899999999999988 88
Q ss_pred eeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHH
Q psy13922 362 SCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKA 441 (509)
Q Consensus 362 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~ 441 (509)
.++....+-.+-+-+--|.+. .. ..+.|.+.+|.++-+.+...+
T Consensus 427 ivyG~~dSpVvplll~~~~k~------------~~-f~r~~l~~nigvVvvgfPatp----------------------- 470 (519)
T KOG1357|consen 427 IVYGNNDSPVVPLLLYGPAKI------------VA-FSREMLERNIGVVVVGFPATP----------------------- 470 (519)
T ss_pred EEecCCCCCcceeeecCcccc------------cH-HHHHHHhcCceEEEEeCCCch-----------------------
Confidence 887655552222112112211 11 355666678877754432221
Q ss_pred hhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHHHHHHhh
Q psy13922 442 KAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
.+ .+ ..|++.+ ++.|+++.+++.+.++-++.+.+
T Consensus 471 --------l~--------------e~----------r~R~c~Sa~ht~e~ld~~l~~i~~~g~~~~~~ 506 (519)
T KOG1357|consen 471 --------LL--------------ES----------RARFCLSASHTKEDLDRALEVIDRVGDEDGVK 506 (519)
T ss_pred --------HH--------------Hh----------HHHhhhcccccHHHHHHHHHHHhhhchhhcce
Confidence 00 11 5666665 89999999998888877554443
No 365
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.22 E-value=7e-09 Score=105.26 Aligned_cols=302 Identities=12% Similarity=0.108 Sum_probs=166.4
Q ss_pred CCCCCCHHHHHHHHHHHhcccC-----CCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRG-----QSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~-----~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
|+..+|+.|++++.+.+.+... -..++.++. ..++.+.+.+.+++.++.+-+.+=+++++|+|.++.++...|
T Consensus 11 GPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~--F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nl 88 (364)
T PRK12462 11 GPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSW--FSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNF 88 (364)
T ss_pred CCcCCCHHHHHHHHHHHhcccccCccccccccccHH--HHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHc
Confidence 6677899999999988877432 113333332 255666666666666664323333455677999999999999
Q ss_pred hcCCCCCCCeEE--EcCCCChh-HHHHHHhcCCEEEEEecCCCCCC--CCCHHHHHHHHHhhhccCCceEEEEeCCCCCC
Q psy13922 97 IEDVDGKKPGVL--IPIPQYPL-YSASLAEFNMEQIGYYLDESKQW--GLPISELERSITEARKHCNPRAIVIINPGNPT 171 (509)
Q Consensus 97 ~~~gd~~~~~Vl--v~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~--~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt 171 (509)
..+++ .++ +..-.|.. +...++..| ++..+......+| .++++.+ .+.. +.+.|.+++-.-.|
T Consensus 89 l~~g~----~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~-----d~~~v~~t~NETst 156 (364)
T PRK12462 89 SRPGA----AAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDA-----RAPFRHYVSNETVE 156 (364)
T ss_pred CCCCC----cEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCC-----CCcEEEEccCCCCc
Confidence 98886 554 34444433 456666766 4443322111122 3455554 1122 46777777667777
Q ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 172 GQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 172 G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
|+.++ ++.+.+++++|+|.+-..+.. ...+..+ ++++. |.=|.+ |.||+ +.+
T Consensus 157 Gv~~~--------~~~~~~~~llvvD~sS~~~s~-----pid~~~~-----------dvi~a-gsQKnl-gP~Gl--tvv 208 (364)
T PRK12462 157 GLQFP--------DAAGLPDSPLIADMSSDFMSR-----PFDVEAY-----------GMVYA-HAQKNL-GPAGV--TVA 208 (364)
T ss_pred eEecC--------cccccCCCeEEEEcCchhhCC-----CCChHHc-----------cEEEe-eccccC-CCCce--EEE
Confidence 88876 222236899999987765331 2333332 26665 659999 88885 444
Q ss_pred eeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCccc---ccchhhcccCCCCCCCC
Q psy13922 252 EVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSV---GQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~al~~~~~~~~~~~~ 328 (509)
+ .+++.+++..+.. ++.+ .+...+-++.+.+.. ...++...++
T Consensus 209 i---vs~~al~~~~~~~-----p~~l-------------------dy~~~~~~~s~~nTPpv~~iy~l~~~l~------- 254 (364)
T PRK12462 209 I---IRRALLERVPDTL-----PPML-------------------DFRTHVEHRSNYNTPPVFAIYVMALVLR------- 254 (364)
T ss_pred E---ECHHHHhhccccC-----Cchh-------------------hHHHHHhcCCCCCCchHHHHHHHHHHHH-------
Confidence 4 3777666554310 1110 000000011111111 2333333322
Q ss_pred chHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCeec----cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHh
Q psy13922 329 SYEQFS-REKQSVLDSLKQRAKMVADTFNSIEGMSCN----PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLE 403 (509)
Q Consensus 329 ~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~ 403 (509)
|-.-. .-++.+.++.++..+++++.+...+++-.. ...+-+.+.+++.-+. .+.+| ...++
T Consensus 255 -~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~------------l~~~f-~~~a~ 320 (364)
T PRK12462 255 -WIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQPR------------LDTLF-KEQST 320 (364)
T ss_pred -HHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCHH------------HHHHH-HHHHH
Confidence 11000 026777888888899999999988654322 2334445544443111 13333 45667
Q ss_pred hcCeEEecCC
Q psy13922 404 RTGICIVPGA 413 (509)
Q Consensus 404 ~~gI~v~pg~ 413 (509)
+.|+....|+
T Consensus 321 ~~gl~~lkGh 330 (364)
T PRK12462 321 EAGFCGLSGH 330 (364)
T ss_pred HCCCccccCC
Confidence 7898877655
No 366
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.13 E-value=1.1e-08 Score=104.83 Aligned_cols=194 Identities=14% Similarity=0.086 Sum_probs=119.3
Q ss_pred CCCCC-CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh-cC
Q psy13922 22 DDPRF-PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-ED 99 (509)
Q Consensus 22 ~~~~~-p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-~~ 99 (509)
|+..+ |...++++...+-. .+++++. ..++.+.+.+.+.+.++.+-+.+-+++++|+|.+++.++..+. ++
T Consensus 10 gp~~~~~~~~~~~~~~~~~~-----~~HRs~~--F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~ 82 (374)
T TIGR01365 10 GPCAKRPGWSIEELKNAPLG-----RSHRSKL--GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCR 82 (374)
T ss_pred CccCCCchhhHHHHhhhhcc-----cCcCCHH--HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCC
Confidence 44444 44455555543333 2234432 2556666666666666633223346779999999999999998 47
Q ss_pred CCCCCCeEEEcCCCChh-HH-HHHHhcCC-EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 100 VDGKKPGVLIPIPQYPL-YS-ASLAEFNM-EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~-~~-~~~~~~g~-~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
|+ .|++.. .|.. +. ++++..|. ++..+..... -.+|+++++. . . .|++++.--.||+..+
T Consensus 83 g~----~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~~g--~~~~~~~ve~---~------~-~v~~vhnETSTGv~np 145 (374)
T TIGR01365 83 GV----DVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAEYG--KLPDLKKVDF---K------N-DVVFTWNGTTSGVRVP 145 (374)
T ss_pred CC----eEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCCCC--CCCCHHHcCC---C------C-CEEEecCCCchheecc
Confidence 76 888765 5444 35 78888999 4666653322 2678888862 1 1 2456766677888887
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
+++++..+ +++++|+|.+-+.... ...+.. .++++. |.-|.+.+.|| ++.++ .
T Consensus 146 ---v~~i~~~~--~~~lliVDavSs~g~~-----~l~~d~-----------iDv~~t-gsQK~L~~ppG--ls~v~---v 198 (374)
T TIGR01365 146 ---NGDFIPAD--REGLTICDATSAAFAQ-----DLDYHK-----------LDVVTF-SWQKVLGGEGA--HGMLI---L 198 (374)
T ss_pred ---cccccccc--CCCcEEEEccchhcCC-----CCChhH-----------CcEEEE-echhccCCCCc--eEEEE---E
Confidence 44444322 5899999988766332 222222 126655 66999954444 56666 4
Q ss_pred CHHHHHHHHH
Q psy13922 257 DPGVKAMLHK 266 (509)
Q Consensus 257 ~~~~~~~l~~ 266 (509)
+++.+++...
T Consensus 199 s~~Al~~~~~ 208 (374)
T TIGR01365 199 SPRAVARLES 208 (374)
T ss_pred CHHHHHHHhh
Confidence 7777776654
No 367
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.09 E-value=1e-06 Score=95.25 Aligned_cols=225 Identities=15% Similarity=0.119 Sum_probs=147.8
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC-
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV- 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g- 100 (509)
..+..++.++..+...+-+ .....|..+.+...+.+.+.+++.+.+|.+ ...-.+|+|||+|.-..+...++..
T Consensus 91 ~~~~~~paila~~~a~~~N---~n~~~~e~SP~~t~lE~~vi~~la~l~G~~--~~~G~~TsGGT~ANl~aL~~AR~~k~ 165 (608)
T TIGR03811 91 NSETLMPAILAYNYAMLWN---GNNVAYESSPATSQMEEEVGKEFATLMGYK--NGWGHIVADGSLANLEGLWYARNIKS 165 (608)
T ss_pred cCCCCHHHHHHHHHHHHhC---CCCCccccCchHHHHHHHHHHHHHHHhCCC--CCCeEEeCChHHHHHHHHHHHHHhhh
Confidence 3444455555555444444 222335455566889999999999998855 3344578999998887766654310
Q ss_pred --------C--------------------------------------------CCCC-eEEEcCCCChhHHHHHHhcCC-
Q psy13922 101 --------D--------------------------------------------GKKP-GVLIPIPQYPLYSASLAEFNM- 126 (509)
Q Consensus 101 --------d--------------------------------------------~~~~-~Vlv~~p~y~~~~~~~~~~g~- 126 (509)
. -.+. .++++.-.|.++..++..+|.
T Consensus 166 ~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG 245 (608)
T TIGR03811 166 LPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIG 245 (608)
T ss_pred ccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCC
Confidence 0 0001 477888889999999999998
Q ss_pred --EEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHH---HHCCc--EEEEcc
Q psy13922 127 --EQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFA---HREKL--FLFADE 198 (509)
Q Consensus 127 --~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia---~~~~i--~lI~De 198 (509)
.++.||.+++ +++|++.|++.|++.... ..+-+||.+...-.+|.+=+ +++|+++| +++|+ ++.+|.
T Consensus 246 ~~~vv~VpvD~~--~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp---l~eI~~l~~~~~~~gl~~~lHVDA 320 (608)
T TIGR03811 246 LDQVIPVPVDSN--YRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG---IDKIVALRNKLMKEGIYFYLHVDA 320 (608)
T ss_pred cccEEEeecCCC--CcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC---HHHHHHHHHHHHHcCCceeEeeec
Confidence 5899998754 599999999999864333 23445566788888999944 66666666 77897 699999
Q ss_pred cCCccc---ccC-CCcccc------------------------HHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 199 VYQDNV---YAE-GSKFYS------------------------FKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 199 ay~~~~---~~~-~~~~~~------------------------~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
+|+++. +-+ ...+.+ .......+ +..+.|++ .++|.+ . .-...|.
T Consensus 321 AyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gl----e~ADSItv-DpHK~g-~-~Py~~G~ 393 (608)
T TIGR03811 321 AYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAI----SEAESVTI-DPHKMG-Y-IPYSAGG 393 (608)
T ss_pred cccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcC----cCceEEEe-Cccccc-c-cCCCeEE
Confidence 999853 111 000111 11111111 24567877 889997 3 5678887
Q ss_pred EeeecCCHHHHHHHH
Q psy13922 251 SEVINLDPGVKAMLH 265 (509)
Q Consensus 251 v~~~~~~~~~~~~l~ 265 (509)
+++ .++.+.+.+.
T Consensus 394 ll~--Rd~~~~~~~~ 406 (608)
T TIGR03811 394 IVI--QDIRMRDVIS 406 (608)
T ss_pred EEE--eCHHHHHHHh
Confidence 776 7887666553
No 368
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.08 E-value=1e-07 Score=94.00 Aligned_cols=202 Identities=20% Similarity=0.256 Sum_probs=127.1
Q ss_pred HHHHHHHHH-HhcccCCCcccCCCC-cchHHHHHHHHHHHhhhcCCCCCCCcEEE---eCCHHHHHHHHHHHhhcCCCCC
Q psy13922 29 DVKQRAQAV-LDGCRGQSVGSYTDS-PGIEIIRRHVAQYISRRDGQPADWQDVIL---SAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 29 ~v~~a~~~~-l~~~~~~~~~~Y~~~-~g~~~lr~~va~~l~~~~g~~~~~~~i~~---t~G~~~al~~~~~~l~~~gd~~ 103 (509)
+|+++.++. +.+....+.+.|+-. .|-..|.+-.|+.+ | .|.-++ .-++|.||.+++..+++|||
T Consensus 28 KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vf----g----aE~ALVRpq~vSGTHAi~~~Lfg~LrpGD-- 97 (403)
T PF06838_consen 28 KVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVF----G----AEDALVRPQFVSGTHAIALALFGVLRPGD-- 97 (403)
T ss_dssp HHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHC----T-----SEEEEETTS-SHHHHHHHHHHHH--TT---
T ss_pred HHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHh----C----chhhhhcccccchHHHHHHHHHhcCCCCC--
Confidence 455554332 223333334446553 36555666666665 2 444444 24677899999999999999
Q ss_pred CCeEEE-cCCCChhHHHHH----------HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe-CCCCCC
Q psy13922 104 KPGVLI-PIPQYPLYSASL----------AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII-NPGNPT 171 (509)
Q Consensus 104 ~~~Vlv-~~p~y~~~~~~~----------~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~-~p~NPt 171 (509)
+++. ...-|......+ +..|++...+++.+++ .+|.+.+++.++. ++|+|+|- +...-.
T Consensus 98 --~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg--~~D~~~i~~~~~~-----~tk~v~IQRSrGYs~ 168 (403)
T PF06838_consen 98 --ELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDG--TIDWEAIKKALKP-----NTKMVLIQRSRGYSW 168 (403)
T ss_dssp --EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTS--SB-HHHHHHHHHT-----TEEEEEEE-S-TTSS
T ss_pred --eEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCC--CcCHHHHHHhhcc-----CceEEEEecCCCCCC
Confidence 8774 555566666554 5678999999998865 7899999999997 89999995 555555
Q ss_pred CCCCCHHHHHHHHHHHHH--CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCC--e
Q psy13922 172 GQVLTKENIQDIIKFAHR--EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGL--R 247 (509)
Q Consensus 172 G~~~s~~~l~~l~~ia~~--~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Gl--r 247 (509)
=..++.++++++++++|+ .++++++|.+|++|+-.-+ +. +++. -+..+|+-|.. | .|+ -
T Consensus 169 R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E--P~-------~vGA------Dl~aGSLIKNp-G-GgiApt 231 (403)
T PF06838_consen 169 RPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE--PT-------EVGA------DLMAGSLIKNP-G-GGIAPT 231 (403)
T ss_dssp S----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS---GG-------GGT-------SEEEEETTSGG-G-TTT-SS
T ss_pred CCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC--cc-------ccch------hheeccceeCC-C-CCccCc
Confidence 568888999999999887 5799999999999985432 22 2222 35589999999 6 777 4
Q ss_pred eEEEeeecCCHHHHHHHHHhhh
Q psy13922 248 GGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 248 ~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.||++ +..+++++.....+
T Consensus 232 GGYIa---Gr~~lVe~~a~RLT 250 (403)
T PF06838_consen 232 GGYIA---GRKDLVERAAYRLT 250 (403)
T ss_dssp -EEEE---ESHHHHHHHHHHHS
T ss_pred CCEEe---chHHHHHHHHhhhc
Confidence 89998 89999998865443
No 369
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.01 E-value=7.1e-08 Score=93.18 Aligned_cols=307 Identities=13% Similarity=0.134 Sum_probs=187.8
Q ss_pred HHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC-CChhHH----HHHHhcCCEEEEEe
Q psy13922 58 IRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP-QYPLYS----ASLAEFNMEQIGYY 132 (509)
Q Consensus 58 lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p-~y~~~~----~~~~~~g~~~~~v~ 132 (509)
+-..++-++ | ..+++++++.+++-.++.++.+..++.. ++.||+++- +|+.-. ..+...+.. ++
T Consensus 81 lgdklApLi----G--A~~~Evvv~dtts~nl~k~L~aalr~~~--~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~ 149 (407)
T COG3844 81 LGDKLAPLI----G--ARAGEVVVTDTTSINLFKVLAAALRPQE--GRRVIVSEGDNFPTDLYIAEGLADLLGIG---YD 149 (407)
T ss_pred HHHHhhhhh----c--CCCCceEEeCCcchHHHHHHHHHhccCC--CceEEeecCCCCCcchhhhcchhhhhccc---cc
Confidence 444444444 4 6788999999999999988888877653 447777754 333222 222333321 11
Q ss_pred cCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccc
Q psy13922 133 LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFY 212 (509)
Q Consensus 133 ~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~ 212 (509)
+ ...+.+.++++++.. ++.+|++++.+.-||+.+. +.+|..++++++++++-|-+++..... .
T Consensus 150 ~----~~~~~P~~~~~~~~d-----d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGavp-----~ 212 (407)
T COG3844 150 L----EGVIAPRALEEAITD-----DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAVP-----V 212 (407)
T ss_pred c----eeeeChHHHHHhhcc-----ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCcc-----e
Confidence 1 114467899999988 7999999999999999988 899999999999999999998774332 1
Q ss_pred cHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCc
Q psy13922 213 SFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFP 292 (509)
Q Consensus 213 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (509)
.+-.. +. -+.+++--|.++|=||-..|..+ .++..+......++|+++..+.... + .|.
T Consensus 213 ~Lh~~---------ga-DfaigcsyKYLNgGPGapa~l~v----~~~h~e~~~~~lsgW~gha~pf~m~--~-----~y~ 271 (407)
T COG3844 213 DLHAA---------GA-DFAIGCSYKYLNGGPGAPAGLFV----APRHRERSWPPLSGWWGHARPFAME--E-----VYA 271 (407)
T ss_pred eeccc---------CC-CeeeeeeceeccCCCCCceeEEe----ccccccccccccccccCCCCcchhh--h-----ccC
Confidence 11110 11 24477778998877887666554 5555555555555565554431111 0 000
Q ss_pred hhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC--CCeeccCC--
Q psy13922 293 DDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS-IE--GMSCNPVQ-- 367 (509)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~--g~~~~~~~-- 367 (509)
...-...+--+++..+..+++...++- |... .+.++|++-..+.+++++.++. ++ ++++..|.
T Consensus 272 ---p~~ga~rf~~gt~~V~s~aal~~aLDi-------fa~~--~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~ 339 (407)
T COG3844 272 ---PGPGARRFLCGTQPVLSLAALEGALDI-------FADV--DITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAH 339 (407)
T ss_pred ---cCccccceeeCCcchhhhHHHhhhhhh-------hhhc--CHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchh
Confidence 000001122233333344444444331 1111 2788899999999999998876 33 45554332
Q ss_pred --ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcC
Q psy13922 368 --GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEG 445 (509)
Q Consensus 368 --~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 445 (509)
-|-.+. +.+|. ... +.+.|.++||..- |-.
T Consensus 340 ~~rGsqvS--~~hp~-------------~~~-V~qaLi~rGVigD----~R~---------------------------- 371 (407)
T COG3844 340 EERGSQVS--LYHPH-------------GYQ-VMQALIDRGVIGD----FRE---------------------------- 371 (407)
T ss_pred hhccceee--EecCc-------------HHH-HHHHHHHcCcccc----ccC----------------------------
Confidence 222333 22222 222 5677778898642 111
Q ss_pred CCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee---cChHHHHHHHHHHHHHHHH
Q psy13922 446 KCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL---PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~---~~~~~i~~~~~~l~~~~~~ 503 (509)
|+ .+|+.++ ++..++-.+++.|.++++.
T Consensus 372 --------------------P~----------vlRfgftPlY~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 372 --------------------PD----------VLRFGFTPLYVSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred --------------------CC----------eeeecCccceechhHHHHHHHHHHHHHHh
Confidence 44 7999988 7889999999999999875
No 370
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.00 E-value=3.1e-07 Score=103.94 Aligned_cols=187 Identities=12% Similarity=0.062 Sum_probs=116.1
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCC-----cc----hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDS-----PG----IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~-----~g----~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
.|+.+++++.+... ++..|+|- +| +.++++.+++++ | ++++|+.++.++|.+.+.++.++
T Consensus 117 ~P~~v~~~i~~~~~-----~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt----G--~~~anaSL~d~aTAaaea~~~a~ 185 (993)
T PLN02414 117 VPPVILRNILENPG-----WYTQYTPYQAEIAQGRLESLLNYQTMITDLT----G--LPMSNASLLDEGTAAAEAMAMCN 185 (993)
T ss_pred CCHHHHHHHHhChH-----HHhhcCCCchHHHHHHHHHHHHHHHHHHHHh----C--CChhhEeecCChHHHHHHHHHHH
Confidence 57677677644332 23334443 34 445667777776 4 77899999999999999888777
Q ss_pred h-cCCCCCCCeEEEcCCCChhHHHHHH----hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC
Q psy13922 97 I-EDVDGKKPGVLIPIPQYPLYSASLA----EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPT 171 (509)
Q Consensus 97 ~-~~gd~~~~~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt 171 (509)
. .++ ++++|++++-.|+.+...++ ..|++++.++.+.. + ...+ .+.++++..|+ -+
T Consensus 186 ~~~~g--~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~-----~v~~vlvq~P~-~~ 246 (993)
T PLN02414 186 NILKG--KKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSG-----DVCGVLVQYPA-TD 246 (993)
T ss_pred hcccC--CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccC-----ceEEEEEecCC-CC
Confidence 4 333 24589999999998776654 45999998876421 1 0111 34444444444 48
Q ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC---CCee
Q psy13922 172 GQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC---GLRG 248 (509)
Q Consensus 172 G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~---Glr~ 248 (509)
|.+.+ +++|+++|+++|+++++ .+... ... ...++.++ +. -|++++..|+. +.- |=+.
T Consensus 247 G~v~d---v~~I~~~ah~~GaL~iV-aad~l-al~---~l~~pge~----GA------Di~vgsgqKwg-~P~G~GGP~a 307 (993)
T PLN02414 247 GEVLD---YAEFVKNAHANGVKVVM-ATDLL-ALT---MLKPPGEW----GA------DIVVGSAQRFG-VPMGYGGPHA 307 (993)
T ss_pred eEEcC---HHHHHHHHHHcCCEEEE-EECHH-Hhc---CCCCHhhc----cC------cEEEECCCccc-cCCCCCCCCe
Confidence 99966 99999999999999999 33322 111 12223222 22 23466767765 222 2237
Q ss_pred EEEeeecCCHHHHHHH
Q psy13922 249 GYSEVINLDPGVKAML 264 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l 264 (509)
|++. ..+++...+
T Consensus 308 Gfla---vr~~~~r~~ 320 (993)
T PLN02414 308 AFLA---TSQEYKRLM 320 (993)
T ss_pred eEEE---ECHHHHhhC
Confidence 8887 466665433
No 371
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.93 E-value=3.3e-07 Score=96.20 Aligned_cols=166 Identities=14% Similarity=0.148 Sum_probs=121.2
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD 134 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 134 (509)
..+..+..|+.++ ....-++++|++.++..++.+++.+|| .|+++-+||.+....+-..|+..+++...
T Consensus 72 i~eAqe~aA~~fg-------Ad~tyFvvNGTS~ank~vi~a~~~~GD----~VLvdRN~HKSi~~glilaGa~Pvyl~p~ 140 (557)
T COG1982 72 IKEAQELAARVFG-------ADHTYFVVNGTSTANKAVINAVLTPGD----KVLVDRNCHKSIHHGLILAGATPVYLEPS 140 (557)
T ss_pred HHHHHHHHHHHhC-------CCceEEEECCccHHHHHHHHhhcCCCC----EEEecCCccHHHHHHHHHcCCceEEecCC
Confidence 3556666666663 223688899999999999999999999 99999999999999999999999988654
Q ss_pred CCCCC----CCCHHHHHHHHHhhhccCCc-eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCC
Q psy13922 135 ESKQW----GLPISELERSITEARKHCNP-RAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGS 209 (509)
Q Consensus 135 ~~~~~----~~d~~~L~~~i~~~~~~~~~-~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~ 209 (509)
.+..| +++.+.+.+.+..+. .. ++++++||.. .|++++ +++|.+++.++++|+.+|+++.......+
T Consensus 141 ~np~~gi~ggI~~~~~~~~l~~~~---~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~- 212 (557)
T COG1982 141 RNPLYGIIGGIPLETFKEALLAHP---DAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSP- 212 (557)
T ss_pred CCccccccCCCCHHHHHHHHHhCh---hhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccc-
Confidence 43323 578999999887642 34 7788887766 599988 88888899999999999998854321111
Q ss_pred ccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 210 KFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
.... ...+ ...+++..|.+|.. +++.-+-.
T Consensus 213 ~l~~---~~~~------~~~~~~tqS~HK~l---~alSQaS~ 242 (557)
T COG1982 213 MLPE---SALN------GGADFVTQSTHKLL---AALSQASM 242 (557)
T ss_pred cCcc---hhhh------cCceEEEechhhhh---hhhhhhHH
Confidence 1111 1111 22377788999998 35543333
No 372
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.93 E-value=4.5e-09 Score=93.74 Aligned_cols=64 Identities=25% Similarity=0.484 Sum_probs=60.4
Q ss_pred CCCCcchHHHHHHHHHHHhhhcC--CCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDG--QPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL 116 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~ 116 (509)
|++..|.++||+++|+|+++++| +.+++++|++|+|+++++..++.+++++|| .|+++.|+|.+
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD----~VlVp~P~Y~~ 153 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGD----AFLVPTPYYAA 153 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCC----EEEEeCCCCCC
Confidence 88999999999999999999988 678899999999999999999999999999 99999999963
No 373
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.90 E-value=6.8e-07 Score=101.49 Aligned_cols=174 Identities=14% Similarity=0.119 Sum_probs=115.1
Q ss_pred CCCcccCCCCc-----chH----HHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC
Q psy13922 43 GQSVGSYTDSP-----GIE----IIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ 113 (509)
Q Consensus 43 ~~~~~~Y~~~~-----g~~----~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~ 113 (509)
++++..|.|-+ |.. ++++.++++. | ++..|+.+..++|++.+.++.++.-... ++++|++++-.
T Consensus 102 ~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt----G--~~~anaSl~d~aTAa~ea~~~a~~~~~~-~~~~vlv~~~~ 174 (954)
T PRK05367 102 PAWYTAYTPYQPEISQGRLEALLNFQTMVADLT----G--LEIANASLLDEATAAAEAMALAKRVSKS-KSNRFFVDDDV 174 (954)
T ss_pred cchhhccCCCChHHHHHHHHHHHHHHHHHHHHH----C--CChhhccccccHHHHHHHHHHhhhhccC-CCCEEEEcCcc
Confidence 35566677744 444 4455555555 4 6788999999999999988887742211 13499999999
Q ss_pred ChhHHHHH----HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Q psy13922 114 YPLYSASL----AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR 189 (509)
Q Consensus 114 y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~ 189 (509)
|+.+...+ +..|++++.++.+.+ ++ .+ ++.++++.+| |-+|.+.+ +++|+++|++
T Consensus 175 hP~~~~v~~t~a~~~G~ev~~~~~~~d------~~------~~-----~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~ 233 (954)
T PRK05367 175 HPQTLDVLRTRAEPLGIEVVVGDAAKA------LD------HD-----DVFGVLLQYP-GTSGEVRD---YTALIAAAHA 233 (954)
T ss_pred CHHHHHHHHHHHHhCCCEEEEecCccC------CC------cc-----cEEEEEEecC-CCCeeecc---HHHHHHHHHH
Confidence 99877654 557999999986531 11 12 4666666666 66899965 9999999999
Q ss_pred CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc-----cCCCCCCeeEEEeeecCCHHHHHHH
Q psy13922 190 EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG-----YMGECGLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 190 ~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~-----~~G~~Glr~G~v~~~~~~~~~~~~l 264 (509)
+|+++++|.....+.. ..+.. +++. -|+++|..|+ | |=|| .|++. ..+++...+
T Consensus 234 ~Gal~~vda~~~Al~~-----l~~pg----e~Ga------Di~vgs~qkfg~P~g~-GGP~--aGfla---vr~~~~r~l 292 (954)
T PRK05367 234 RGALVAVAADLLALTL-----LTPPG----EMGA------DIAVGSAQRFGVPMGF-GGPH--AAYFA---VRDAYKRSM 292 (954)
T ss_pred cCCEEEEEehhhhccC-----CCChh----hcCC------CEEEeeCcccCCCCCC-CCCC--EEEEE---ECHHHHhhC
Confidence 9999999974432221 11222 2222 2445677887 5 3354 78887 466776665
Q ss_pred H
Q psy13922 265 H 265 (509)
Q Consensus 265 ~ 265 (509)
.
T Consensus 293 p 293 (954)
T PRK05367 293 P 293 (954)
T ss_pred C
Confidence 3
No 374
>KOG1383|consensus
Probab=98.86 E-value=4.2e-07 Score=91.88 Aligned_cols=185 Identities=15% Similarity=0.107 Sum_probs=132.0
Q ss_pred chHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc---C--CCCCCCeEEEcCCCChhHHHHHHhcCCEE
Q psy13922 54 GIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE---D--VDGKKPGVLIPIPQYPLYSASLAEFNMEQ 128 (509)
Q Consensus 54 g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~---~--gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~ 128 (509)
+..++..++.+++...++.+ ....=..|.|+++++.+..+.+.. . +- .+..++++.-.+..+...++..+.++
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I-~~p~iv~~~~v~~a~eK~a~yf~v~l 194 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGI-DKPNIVTPQNVHAAFEKAARYFEVEL 194 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCC-CCccccchHHHHHHHHHHHhhEEEEE
Confidence 44567777777776666544 223346688999997666666532 1 21 24478888888889999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH-CCcEEEEcccCCccccc-
Q psy13922 129 IGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR-EKLFLFADEVYQDNVYA- 206 (509)
Q Consensus 129 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~-~~i~lI~Deay~~~~~~- 206 (509)
..||.++ +.|.+|+..+.+.+++ ++.+++.+.|+-|+|.. +++++|.++..+ +++.+.+|.+-+.|...
T Consensus 195 ~~V~~~~-~~~~~D~~k~~~~i~e-----Nti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~ 265 (491)
T KOG1383|consen 195 REVPLDE-GDYRVDPGKVVRMIDE-----NTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPA 265 (491)
T ss_pred Eeeeccc-cceEecHHHHHHHhcc-----ceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccc
Confidence 9999987 4789999999999999 89999999999999999 889999999999 99999999998888652
Q ss_pred CCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 207 EGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+.... ...+-+.+.+..|.. +-+|. |+.--..||++. +++++.
T Consensus 266 ~~~~~-------~~fdFr~p~V~Sisa-~~HKY--Gl~~~G~~~vl~--r~k~~~ 308 (491)
T KOG1383|consen 266 GYLNE-------EEFDFRVPGVTSISA-DGHKY--GLAPAGSSWVLY--RNKELL 308 (491)
T ss_pred cccCc-------cccccCCCCceeEee-cccee--eeeecCcEEEEE--cccccc
Confidence 11000 011111123233444 22554 555556899875 666654
No 375
>KOG1358|consensus
Probab=98.84 E-value=2.7e-07 Score=91.19 Aligned_cols=206 Identities=17% Similarity=0.158 Sum_probs=135.3
Q ss_pred CHHHHHHHHHHHhcccCCCc---ccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSV---GSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~---~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
.+.+.+.+...+++.+.+.+ +.|+..+-...+.+.+|+|++ ..+.|+...| ..++..++.++++.||
T Consensus 110 ~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G-------~E~aivYs~g-F~ti~S~ipafsKrGD-- 179 (467)
T KOG1358|consen 110 NEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG-------TEDAIVYSYG-FSTIESAIPAFSKRGD-- 179 (467)
T ss_pred cHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC-------Ccceeeeccc-cchhhhcchhhhccCc--
Confidence 45788888888888665544 347776666778899999883 3445555555 5688889999999998
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh----hccC---C-ceEEEEeCCCCCCCCCC
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEA----RKHC---N-PRAIVIINPGNPTGQVL 175 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~----~~~~---~-~~~ivi~~p~NPtG~~~ 175 (509)
.|.+.+-+....+..++...-.+..+..+ |++.|++.+.+. .+.+ . .+.|++..-.-++|...
T Consensus 180 --Ii~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~ 250 (467)
T KOG1358|consen 180 --IIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDIC 250 (467)
T ss_pred --EEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCccc
Confidence 88888888777887777766666666533 677777766432 1211 2 23455566677789998
Q ss_pred CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc-ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF-YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
+ +.+|+++..+|...||.||.|+....+..... .....+ +. +.. -++++|++-.++ .. .|+++
T Consensus 251 p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v--~~----~~i-Div~~sm~~ala-s~---GgFc~-- 314 (467)
T KOG1358|consen 251 P---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGV--PI----TDI-DIVTASMETALA-SG---GGFCA-- 314 (467)
T ss_pred c---cHHHHHHHhhheEEEEEecccccccccccCccccccCCC--Cc----cce-eeeeeccccccc-cc---Cceee--
Confidence 8 89999999999999999999987665431111 000000 00 012 345668777764 22 47775
Q ss_pred cCCHHHHHHHHHhhh
Q psy13922 255 NLDPGVKAMLHKSIS 269 (509)
Q Consensus 255 ~~~~~~~~~l~~~~~ 269 (509)
+ ..++...+++.+
T Consensus 315 -G-~~~i~~hQrLSg 327 (467)
T KOG1358|consen 315 -G-KSFIADHQRLSG 327 (467)
T ss_pred -c-ceeeEeeeeccc
Confidence 4 555555555544
No 376
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.79 E-value=1.7e-06 Score=87.14 Aligned_cols=220 Identities=14% Similarity=0.135 Sum_probs=149.4
Q ss_pred HHHHHhhc--CCCCCCCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHH-HHHHHHhhhcCCCCCCCcEEEeCCH
Q psy13922 9 LQVLALVS--LPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRR-HVAQYISRRDGQPADWQDVILSAGA 85 (509)
Q Consensus 9 ~~~~~~~~--~~~~~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~-~va~~l~~~~g~~~~~~~i~~t~G~ 85 (509)
+.+.|.+. ...-+|.+.+.+.+++++..++... -.+. |.-..|...-|- .+++.+. + -...+.++++++.
T Consensus 20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~--v~Le-~~l~~g~~~~R~~~~~~~~~---~-~~~aea~~ivnnn 92 (395)
T COG1921 20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAP--VELE-TDLKTGKRGARLTELAELLC---G-LTGAEAAAIVNNN 92 (395)
T ss_pred hhhhhhhhhheeccCCCccCCHHHHHHHHHHhccc--ceee-eecccchhhHHHHHHHHHHh---c-ccchhheeeECCc
Confidence 45555555 3445699999999999999998883 2332 433333232222 3333332 2 1236789999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCeEEEc----C-CCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCce
Q psy13922 86 SDGIKSVLKLLIEDVDGKKPGVLIP----I-PQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPR 160 (509)
Q Consensus 86 ~~al~~~~~~l~~~gd~~~~~Vlv~----~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~ 160 (509)
+.|+..++.++.++. .|++. . +...+..+.++..|++++++-... ......++.+|.+ +++
T Consensus 93 ~aAVll~~~al~~~~-----EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne-----~ta 158 (395)
T COG1921 93 AAAVLLTLNALAEGK-----EVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINE-----NTA 158 (395)
T ss_pred HHHHHHHHhhhccCC-----eEEEEccccccCCCCChhHHHHHcCCEEEEecccC----cCCHHHHHHHhcc-----CCe
Confidence 999999999998754 44442 2 477788999999999999986543 3478999999998 788
Q ss_pred EEE-EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 161 AIV-IINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 161 ~iv-i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
+++ +.+.|.+.=..++ .++++++|+++|+++++|.+-...+.. -+.+..+. ..+ .+++++ |-.|.
T Consensus 159 ~llkV~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~----e~~l~~~l-a~G-----aDLV~~-SgdKl 224 (395)
T COG1921 159 LLLKVHSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDK----EPDLREAL-ALG-----ADLVSF-SGDKL 224 (395)
T ss_pred eEEEEeecccccccccc---HHHHHHHHHHcCCCEEEecCCcccccc----ccchhHHH-hcC-----CCEEEE-ecchh
Confidence 776 5555542222444 677899999999999999988776531 12223222 222 225544 88999
Q ss_pred cCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 240 YMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
+. |-+-|.++ +.+++++++++..-
T Consensus 225 lg---GPqaGii~---GkKelI~~lq~~~l 248 (395)
T COG1921 225 LG---GPQAGIIV---GKKELIEKLQSHPL 248 (395)
T ss_pred cC---CCccceEe---chHHHHHHHHhhhh
Confidence 83 66789888 99999999876533
No 377
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.55 E-value=6.9e-05 Score=75.60 Aligned_cols=161 Identities=19% Similarity=0.276 Sum_probs=117.3
Q ss_pred CcchHHHHHHHHHHHhhhcCCCCCCCcEEE--eCCHH---HHHHHHHHHhh-cCCCCCCCeEEEcCCCChhHHHHHHhcC
Q psy13922 52 SPGIEIIRRHVAQYISRRDGQPADWQDVIL--SAGAS---DGIKSVLKLLI-EDVDGKKPGVLIPIPQYPLYSASLAEFN 125 (509)
Q Consensus 52 ~~g~~~lr~~va~~l~~~~g~~~~~~~i~~--t~G~~---~al~~~~~~l~-~~gd~~~~~Vlv~~p~y~~~~~~~~~~g 125 (509)
.+|..++...+.+||.+--|. +.|-+ -+|++ .++ ++++.+. ..|++.|+.||+|+-.|...-..+..+|
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~----DavsLQP~AGAqGE~aGl-l~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G 178 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGM----DAVSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAG 178 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCC----ceeeccCCCCcchhhHHH-HHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcC
Confidence 358888999999999766552 23333 23443 333 3444443 3566678899999999998889999999
Q ss_pred CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccc
Q psy13922 126 MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVY 205 (509)
Q Consensus 126 ~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~ 205 (509)
.+|+.|+.++++ .+|++.|++...+ ++.++.|++||.- |.. .+.+.+|+++.+++|..|..|-+-..-..
T Consensus 179 ~~VV~V~~~~~G--~VDlddLk~k~~~-----~~AalMiTnPsT~-GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~v 248 (496)
T COG1003 179 FKVVVVKCDENG--NVDLDDLRAKAED-----NLAALMITNPSTL-GVF--EEDIREICEIVHEAGGQVYYDGANLNAIV 248 (496)
T ss_pred ceEEEEecCCCC--CccHHHHHHHhcc-----ceeEEEeccCccc-ccc--hhhHHHHHHHHHHcCCEEEecCcchhhhh
Confidence 999999998876 7899999999997 8999999999763 554 47899999999999999999966543322
Q ss_pred cCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 206 AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
+- ..+ -++ +.+|+.+ -++|+|+
T Consensus 249 G~--~rP------Gd~-----G~DV~Hl-NLHKTF~ 270 (496)
T COG1003 249 GL--ARP------GDM-----GFDVVHL-NLHKTFC 270 (496)
T ss_pred cc--ccc------ccc-----ccceEEe-ecccccc
Confidence 11 000 112 2336666 8899997
No 378
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.44 E-value=9.6e-05 Score=83.16 Aligned_cols=174 Identities=14% Similarity=0.170 Sum_probs=108.4
Q ss_pred CCCcccCCCCc-----chH----HHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC
Q psy13922 43 GQSVGSYTDSP-----GIE----IIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ 113 (509)
Q Consensus 43 ~~~~~~Y~~~~-----g~~----~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~ 113 (509)
++++..|.|-+ |.. ++.+.++++. | .+..|.-+..+++.+.+.++.+...... ++++|+|++-.
T Consensus 90 p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt----G--m~~aNaSl~d~atA~aEa~~~a~~~~~~-~~~~vlv~~~~ 162 (939)
T TIGR00461 90 PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT----G--LPVANASLLDEGTAAAEAMALSFNVSKK-KANKFFVAKDL 162 (939)
T ss_pred chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH----C--CChhhhhccchhhHHHHHHHHHHHhhcC-CCCEEEECCCC
Confidence 45566677644 433 3444455544 5 5666777777888888877766543221 34589999999
Q ss_pred ChhHHHHHH----hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Q psy13922 114 YPLYSASLA----EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR 189 (509)
Q Consensus 114 y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~ 189 (509)
|+.+...++ ..|.+++.++ ++.|++.+ ++.++++.+|+. .|.+. ++++|++++++
T Consensus 163 hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~-------~~~~v~~q~Pn~-~G~ie---d~~~i~~~~h~ 221 (939)
T TIGR00461 163 HPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV-------DVFGCLLQYPAT-DGSIL---DYKQLIDALHS 221 (939)
T ss_pred CcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC-------CEEEEEEECCCC-CeEEe---cHHHHHHHHHH
Confidence 988776655 6688888763 33444333 266777788865 68884 69999999999
Q ss_pred CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC----CCeeEEEeeecCCHHHHHHH
Q psy13922 190 EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC----GLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 190 ~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~----Glr~G~v~~~~~~~~~~~~l 264 (509)
.|.+++++.-...+. -..+..++ +. +++ +++ +|.| |+| |=-.|++. ...++...+
T Consensus 222 ~gal~~~~ad~~al~-----ll~~Pge~----Ga-----Di~-vg~-~q~f-g~p~g~GGP~aG~~a---~~~~l~r~l 280 (939)
T TIGR00461 222 HKSLVSVAADLMALT-----LLTPPGHY----GA-----DIV-LGS-SQRF-GVPMGYGGPHAAFFA---VKDEYNRKM 280 (939)
T ss_pred cCCEEEEEechHHhC-----CcCCHHHc----CC-----cEE-eeC-CCcc-CCCCCCCCCceeeee---ecHhhHhhC
Confidence 999999854322221 12222222 22 244 644 7777 652 43478876 466666555
No 379
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.40 E-value=2.9e-05 Score=78.34 Aligned_cols=190 Identities=14% Similarity=0.130 Sum_probs=110.2
Q ss_pred HHHHHHHHhhhcCCCCCCCcEEEeCCHHH-HHHHHHHHhh-cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCC
Q psy13922 59 RRHVAQYISRRDGQPADWQDVILSAGASD-GIKSVLKLLI-EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDES 136 (509)
Q Consensus 59 r~~va~~l~~~~g~~~~~~~i~~t~G~~~-al~~~~~~l~-~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~ 136 (509)
-..++.-+-+..|.. .....++.+.+|. .+.+.+.++. ++ +.+.|+.+--.+.....++..+|.+++.|+...+
T Consensus 58 tn~l~~d~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~---~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~ 133 (389)
T PF05889_consen 58 TNSLVLDALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRP---KAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLE 133 (389)
T ss_dssp HHHHHHHHHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHC---T--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEE
T ss_pred HHHHHHHHHHHcCCc-cccceEEEecccccHHHHHHHHHhccc---CCceEEEeeccccchHHHHHhcCCeEEEeeccCC
Confidence 333333333444643 2345666655553 3444455554 22 2337888877777788888999999999985432
Q ss_pred C-CCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHH
Q psy13922 137 K-QWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFK 215 (509)
Q Consensus 137 ~-~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~ 215 (509)
+ ....|++.+++.+++..+ .+.+.++++++.--|... +++++|+++|++||++.|+..+|+.=. .......
T Consensus 134 ~d~l~td~~~ie~~i~~~G~--~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~----~~~~~~i 205 (389)
T PF05889_consen 134 GDELITDLEAIEAKIEELGA--DNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQS----SKCMHLI 205 (389)
T ss_dssp TTEEEEHHHHHHHHHHHHCG--GGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-----HHHHHHH
T ss_pred CCeeeccHHHHHHHHHHhCC--CCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhH----HHHHHHH
Confidence 2 235578899999876422 456666665544334432 469999999999999999999997611 0111111
Q ss_pred HHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 216 KVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 216 ~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
+-....++ ++++ +-|.-|.|- -+...+.+. +.++.++..+.+...
T Consensus 206 ~~a~~~GR----vda~-vqS~dkNF~--VPvGgai~A--s~~~~~i~~vs~~Yp 250 (389)
T PF05889_consen 206 QQAWRVGR----VDAF-VQSTDKNFM--VPVGGAIMA--SFDPSGILAVSKEYP 250 (389)
T ss_dssp HHHHHHST----CSEE-EEEHHHHHC--EESSHEEEE--ESSHHHHHHHHHTSH
T ss_pred HHHHhcCC----ccee-eeecCCCEE--ecCCCcEEE--ecCHHHHHHHHHHhh
Confidence 21222332 3344 568899994 666666664 478889988876543
No 380
>KOG1403|consensus
Probab=98.38 E-value=5.5e-05 Score=72.57 Aligned_cols=225 Identities=10% Similarity=0.066 Sum_probs=132.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
.|+|.++....+... ...+++-. .++-+- |+.+...+ ..-+-++++++++||..++++..++-.. ..-
T Consensus 63 hp~VV~A~~kQmat~--~tN~RFlh----d~lv~c-A~~l~stl---PeLsvc~F~NSGSEANDLALRLAR~ftk--hqD 130 (452)
T KOG1403|consen 63 HPEVVRAGAKQMATI--STNNRFLH----DELVQC-ARTLTSTL---PELSVCFFVNSGSEANDLALRLARNFTK--HQD 130 (452)
T ss_pred CHHHHHHHHHHHhHh--cccchhhH----HHHHHH-HHHHhhcC---CCceEEEEecCCchhhHHHHHHHHhhcc--cCc
Confidence 477888877666652 12222221 222222 22222211 1234688999999999999988754321 224
Q ss_pred EEEcCCCChhHHHHHHhc-------C-----CEEEEEecCCC---CCCCC------C-----HHHHHHHHHhhhc-cCCc
Q psy13922 107 VLIPIPQYPLYSASLAEF-------N-----MEQIGYYLDES---KQWGL------P-----ISELERSITEARK-HCNP 159 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-------g-----~~~~~v~~~~~---~~~~~------d-----~~~L~~~i~~~~~-~~~~ 159 (509)
||+.+-.|+++....... | -+.+.+...++ ++|.. | .+.+++.++.... .+.+
T Consensus 131 vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gv 210 (452)
T KOG1403|consen 131 VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGV 210 (452)
T ss_pred eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcH
Confidence 777777777765432111 1 12333322211 22221 1 2345555554332 2455
Q ss_pred eEEEEeCCCCCCCCCCCH-HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHH--HHHHhCCCCCCceeEEEEec
Q psy13922 160 RAIVIINPGNPTGQVLTK-ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKK--VLVEMGEPYKSMELASFMSC 236 (509)
Q Consensus 160 ~~ivi~~p~NPtG~~~s~-~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vi~i~S~ 236 (509)
.+.+...-+.-.|+++|+ ...+.+++..+.+|-..|.||++.+|..-|. .+.++.- +.|+ +-++
T Consensus 211 AAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~-hyWafq~y~fiPD------------IVtm 277 (452)
T KOG1403|consen 211 AAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGS-HYWAFQTYNFIPD------------IVTM 277 (452)
T ss_pred HHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccch-hhhhhhhhccccc------------hhee
Confidence 665556667777876555 5678999999999999999999999876532 4444432 2332 3366
Q ss_pred ccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh---cccCcchhhhhc
Q psy13922 237 SKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS---AMLCPTVLALVS 281 (509)
Q Consensus 237 SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~ 281 (509)
.|.. | .|.+++.++ ..+++.+++....- .+.+.++.++++
T Consensus 278 gKpm-G-NGhPVa~Va---ttkeIA~Af~atgv~YFNTyGGnPVsCAv 320 (452)
T KOG1403|consen 278 GKPM-G-NGHPVAAVA---TTKEIAQAFHATGVEYFNTYGGNPVSCAV 320 (452)
T ss_pred cccC-C-CCCeeeEEe---ccHHHHHHhccccceehhccCCCchhHHH
Confidence 8999 7 999999998 79999999976332 234455554444
No 381
>KOG0629|consensus
Probab=98.34 E-value=0.00017 Score=72.50 Aligned_cols=266 Identities=14% Similarity=0.133 Sum_probs=147.6
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCCC------CCCe-EEEcCCCChhHHH
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVDG------KKPG-VLIPIPQYPLYSA 119 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~------~~~~-Vlv~~p~y~~~~~ 119 (509)
|....+..-..+.+-....+-.||+-..+.|+...|+.+.++.+.-+--+ |+-+ -++. +.++.-+|.+...
T Consensus 133 YEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k 212 (510)
T KOG0629|consen 133 YEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKK 212 (510)
T ss_pred EEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHH
Confidence 66555444344444444444447775555666666666555444333211 1100 0112 3355678889999
Q ss_pred HHHhcC---CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEE-EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEE
Q psy13922 120 SLAEFN---MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIV-IINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195 (509)
Q Consensus 120 ~~~~~g---~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~iv-i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI 195 (509)
++..+| -.++.|+.++.+ .++++.||+.|.......-+..++ .+.-...-|.. ++|..|+++|++|++|+.
T Consensus 213 aAa~lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~lWmH 287 (510)
T KOG0629|consen 213 AAAFLGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKLWMH 287 (510)
T ss_pred HHHHhccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCEEEE
Confidence 999988 678888888775 789999999997653321222333 34555666777 669999999999999999
Q ss_pred EcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcc
Q psy13922 196 ADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPT 275 (509)
Q Consensus 196 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~ 275 (509)
+|.+|.+...=+. .+.. ...... ..+.+ .++.+|.. | ..+..+.+++ ....+..+-.....
T Consensus 288 vDAAwGGglLmS~-k~R~---kl~Gie----ra~Sv-twnpHK~~-g-aplqCsa~l~--r~~gll~~Cn~~~A------ 348 (510)
T KOG0629|consen 288 VDAAWGGGLLMSR-KHRH---KLTGIE----RANSV-TWNPHKLM-G-APLQCSAFLT--REEGLLQRCNQMSA------ 348 (510)
T ss_pred eecccccccccCh-hhHh---hccCcc----ccCce-eecHHHhh-c-CcchhhHHHH--HHHHHHHhhcccch------
Confidence 9999987322111 1111 111111 22344 34778999 6 5666666642 44444433322211
Q ss_pred hhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH-------HHHHHHHHHHHH
Q psy13922 276 VLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE-------KQSVLDSLKQRA 348 (509)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 348 (509)
..+.-.....|-+|.. +-.++..... -.-|.-|..| .++.++++.+++
T Consensus 349 --~YLFq~dK~YdvS~DT------------------gdK~iQCGRh-----~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA 403 (510)
T KOG0629|consen 349 --IYLFQQDKFYDVSYDT------------------GDKAIQCGRH-----VDVFKLWLMWKAKGTQGFEAQVDKCLRLA 403 (510)
T ss_pred --hhhhccCceeeccccc------------------ccchhhcCcc-----ccHHHHHHHHHhcccccHHHHHHHHHHHH
Confidence 1111112222222221 1111111111 0012223333 477888999999
Q ss_pred HHHHHHHhcCCCCee
Q psy13922 349 KMVADTFNSIEGMSC 363 (509)
Q Consensus 349 ~~l~~~L~~~~g~~~ 363 (509)
+++.+.|++-++...
T Consensus 404 ~yl~~~lrer~~~~~ 418 (510)
T KOG0629|consen 404 EYLYDRLREREGFEM 418 (510)
T ss_pred HHHHHHHHhccccee
Confidence 999999999866543
No 382
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.30 E-value=5.4e-05 Score=72.74 Aligned_cols=181 Identities=21% Similarity=0.272 Sum_probs=123.1
Q ss_pred CCCC-cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEE-cCCCChhHHH-------
Q psy13922 49 YTDS-PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLI-PIPQYPLYSA------- 119 (509)
Q Consensus 49 Y~~~-~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv-~~p~y~~~~~------- 119 (509)
|+-. -|-.-|..-.|+-+ |.....-+.-+.+|+ .||.+++..+++||| +++. ..--|....+
T Consensus 60 YGydD~GRdtLe~vyA~vf----~aE~a~VRpq~isGT-HAI~~aLfg~LRpgD----ell~i~G~PYDTLeevIG~rg~ 130 (416)
T COG4100 60 YGYDDLGRDTLERVYAQVF----GAEAALVRPQIISGT-HAIACALFGILRPGD----ELLYITGSPYDTLEEVIGLRGE 130 (416)
T ss_pred CCccccchhHHHHHHHHHh----ccccceeeeeeecch-hHHHHHHHhccCCCC----eEEEecCCcchhHHHHhccCCC
Confidence 5442 35455666666665 322111134455655 799999999999999 7663 3333444433
Q ss_pred ---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe-CCCCCCCCCCCHHHHHHHHHHHHH--CCcE
Q psy13922 120 ---SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHR--EKLF 193 (509)
Q Consensus 120 ---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~-~p~NPtG~~~s~~~l~~l~~ia~~--~~i~ 193 (509)
.++..|.....+|+..++ .+|.+.+...++. ++|+|-|. +...----.++.+++++++++.|+ .|++
T Consensus 131 ~~gSL~dfgi~Y~~v~Lt~~g--kiD~~~v~~~i~~-----~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~i 203 (416)
T COG4100 131 GQGSLKDFGIKYKAVPLTADG--KIDIQAVKTAISD-----RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVI 203 (416)
T ss_pred CcccHHHhCcceeecccccCC--cccHHHHHHhcCc-----cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEE
Confidence 356678888899998665 8899999999998 89999885 332222225777899999999988 4799
Q ss_pred EEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCC--eeEEEeeecCCHHHHHHHH
Q psy13922 194 LFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGL--RGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 194 lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Gl--r~G~v~~~~~~~~~~~~l~ 265 (509)
+++|.+|+.|+-.-+ +..+ +. -+.-+|+-|.- | .|+ -.||++ +..+++++-.
T Consensus 204 vFVDNCYGEFvE~~E--Pt~v-------Ga------DliAGSLIKNp-G-GgiaktGGYia---Gk~~~ve~~~ 257 (416)
T COG4100 204 VFVDNCYGEFVEEKE--PTHV-------GA------DLIAGSLIKNP-G-GGIAKTGGYIA---GKAELVEAAA 257 (416)
T ss_pred EEEeccchhhhhccC--cccc-------ch------hhhccceeeCC-C-Cceeeccceee---chHHHHHhhc
Confidence 999999999986532 2211 11 13367999988 5 676 478887 7888887653
No 383
>KOG0628|consensus
Probab=98.27 E-value=0.0022 Score=65.45 Aligned_cols=152 Identities=16% Similarity=0.188 Sum_probs=100.9
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCCC--------CCCcEEEeCCHHHHHHHHHHHhh-----c--CCC--------CCCC
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQPA--------DWQDVILSAGASDGIKSVLKLLI-----E--DVD--------GKKP 105 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~~--------~~~~i~~t~G~~~al~~~~~~l~-----~--~gd--------~~~~ 105 (509)
+....-..+|..-+.+|+.+.++.+. +...|+.++.+ ++...++.+.+ + .+. .++-
T Consensus 105 W~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tas-es~lvallaaR~~~i~~~k~~~p~~~e~~~~~~l 183 (511)
T KOG0628|consen 105 WASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTAS-ESVLVALLAARTEKIEEIKSRPPELHESSVLARL 183 (511)
T ss_pred eecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcc-hhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhh
Confidence 33344558999999999998887541 22245555544 44333333321 1 110 0011
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.+-+++-.+.+....+...|+++..++.+. +|+++.+.|+++|++.....-+..+++.+... ||.+ +-+++.+|..
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~GT-T~~c-a~D~l~elg~ 259 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATLGT-TSSC-AFDELEELGP 259 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEeecC-cccc-ccccHHHhcc
Confidence 345677788888888888999999998876 78999999999999864433444555433322 2222 3368999999
Q ss_pred HHHHCCcEEEEcccCCcccc
Q psy13922 186 FAHREKLFLFADEVYQDNVY 205 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~ 205 (509)
+|+++++|+.+|.+|.+-.+
T Consensus 260 Vc~~~glWLHVDAAYAGsa~ 279 (511)
T KOG0628|consen 260 VCREEGLWLHVDAAYAGSAF 279 (511)
T ss_pred hhhhcCEEEEeehhhccccc
Confidence 99999999999999986443
No 384
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.24 E-value=0.00021 Score=71.03 Aligned_cols=284 Identities=12% Similarity=0.050 Sum_probs=145.8
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCC-----cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQS-----VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~-----~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
|+.-+|+.|++.+.+.+.+..+.. .+ .....+ ..+-+...+.+++.++++-+.+=+++-.|+|....++...|
T Consensus 12 GPa~lp~~vL~~a~~e~~~~~g~g~svme~S-HRsk~~-~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nL 89 (365)
T COG1932 12 GPAALPPEVLQQAQKELLDWNGLGMSVMEIS-HRSKEF-KNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNL 89 (365)
T ss_pred CcccCCHHHHHHHHHHHhhhccCCcceeeec-cccHHH-HHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhh
Confidence 666789999999988888854311 11 111122 33444444555555565544444555577799999999999
Q ss_pred hcCCCCCCCe--EEEcCCCChhHHHHHHhcCC--EEEEEecCCC-CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC
Q psy13922 97 IEDVDGKKPG--VLIPIPQYPLYSASLAEFNM--EQIGYYLDES-KQWGLPISELERSITEARKHCNPRAIVIINPGNPT 171 (509)
Q Consensus 97 ~~~gd~~~~~--Vlv~~p~y~~~~~~~~~~g~--~~~~v~~~~~-~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt 171 (509)
..... . |......-..+..+ +..+. ++........ .+.-++++... +.+ +...|+++.=.-.+
T Consensus 90 l~~~~----~~yv~~g~Ws~~a~~eA-~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-----~~ayv~~~~NeTi~ 157 (365)
T COG1932 90 LGKRG----TDYVDTGAWSEFAIKEA-KKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-----NDAYVHFCWNETIS 157 (365)
T ss_pred hcccC----ceeEeeeehhHhHHHHH-HHhcccccccccceeccCccCCCChhhcc--cCC-----CccEEEEecCCccc
Confidence 87653 3 44444433333333 33332 2222221111 12234444432 222 33335555334445
Q ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 172 GQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 172 G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
|+.++. ...+.. +.++|+|..-..+.. ...+..+ .+|+. |.=|.+ |..| ++.+
T Consensus 158 Gv~v~~--~p~~~~-----~~~~v~D~SS~ilsr-----~iDvsk~-----------dviya-gaQKnl-GpaG--ltvv 210 (365)
T COG1932 158 GVEVPE--LPDIGS-----DGLLVADASSAILSR-----PIDVSKY-----------DVIYA-GAQKNL-GPAG--LTVV 210 (365)
T ss_pred ceEccC--CCCCCC-----CceEEEecccHHhcC-----CCChhHc-----------ceEEE-ehhhcc-Cccc--eEEE
Confidence 776551 222211 278999976655432 2333332 27766 889999 8888 6766
Q ss_pred eeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 252 EVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
+ -++.++++..... .|+.+ .+...+.+++|-+.....+...+.. .-.|-
T Consensus 211 I---vr~~~l~r~~~~~----~P~if-------------------~y~~~~~~~s~yNTPptfa~y~~~l-----v~~Wl 259 (365)
T COG1932 211 I---VRPDLLERAESYT----LPSIF-------------------DYLTHADNGSMYNTPPTFAWYLLGL-----VFKWL 259 (365)
T ss_pred E---EcHHHHhcccccC----CchHh-------------------hchhhhccCCccCCcHHHHHHHHHH-----HHHHH
Confidence 6 4888888776532 12211 1111223333333333333322211 00011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCee--c-cCCceeEEeecCC
Q psy13922 332 QFSREKQSVLDSLKQRAKMVADTFNSIEGMSC--N-PVQGAMYAFPQMK 377 (509)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--~-~~~~g~~~~~~~~ 377 (509)
.-..-++.+.++-++..+.|++.+.+-+-++- . ...+.+.+.+++.
T Consensus 260 k~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~ 308 (365)
T COG1932 260 KSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLV 308 (365)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcC
Confidence 11112677888888889999999988632221 1 2344555554443
No 385
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.20 E-value=0.00028 Score=72.97 Aligned_cols=131 Identities=23% Similarity=0.296 Sum_probs=79.8
Q ss_pred CCcccCCC-----CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH
Q psy13922 44 QSVGSYTD-----SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS 118 (509)
Q Consensus 44 ~~~~~Y~~-----~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~ 118 (509)
++++.|.| ++|..+..-.....+.+..|.+ ..|.=+-.|++.+-+.+..+...... ++++|+++.-.|+.+.
T Consensus 92 ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmd--vaNaSlyd~atA~aEa~~ma~r~~~~-~~~~vlv~~~~hP~~~ 168 (429)
T PF02347_consen 92 EFYTAYTPYQPEISQGRLQALFEYQSMICELTGMD--VANASLYDGATAAAEAMLMAVRATKR-KRNKVLVPESLHPQTR 168 (429)
T ss_dssp HCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSS--EE-SEBSSCCHHHHHHHHHHHHHHTT----EEEEETTS-CHHH
T ss_pred hhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCC--ccCCCCCChhHHHHHHHHHHHHhccc-CCcEEEEcCCcChhhH
Confidence 34445655 4565554444455554444633 33344555666666555555433322 3458999999999888
Q ss_pred HHHH----hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEE
Q psy13922 119 ASLA----EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFL 194 (509)
Q Consensus 119 ~~~~----~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~l 194 (509)
..++ ..|.+++.++.++.+ ..| .+ ++.+|++.+||. .|.+ +++++|+++++++|.++
T Consensus 169 ~v~~t~a~~~g~~iv~~~~~~~~--~~d--------~~-----~~a~v~vq~Pn~-~G~~---ed~~~i~~~~h~~gal~ 229 (429)
T PF02347_consen 169 AVLRTYAAPLGIEIVEVPLDEDG--TTD--------DD-----DTAAVMVQNPNT-FGVF---EDIKEIADIAHAAGALV 229 (429)
T ss_dssp HHHHHHCCHCCEEEEEE-BBTTC--SB---------ST-----TEEEEEEESS-T-TSB-----THHHHHHHHHHTT-EE
T ss_pred HHHHHhhhhCCeEEEEecccccC--Ccc--------cc-----CeEEEEeecCCC-CceE---eeHHHHHHHHHHcCCEE
Confidence 7554 369999999987653 223 23 799999999986 6888 55999999999999998
Q ss_pred EE
Q psy13922 195 FA 196 (509)
Q Consensus 195 I~ 196 (509)
++
T Consensus 230 ~~ 231 (429)
T PF02347_consen 230 IV 231 (429)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 386
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.14 E-value=8.9e-07 Score=88.43 Aligned_cols=213 Identities=16% Similarity=0.161 Sum_probs=40.5
Q ss_pred CCCCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHH-HHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 20 LFDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIR-RHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 20 ~~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr-~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
-+|...+++.+++++.+..... ....|.-..|-..-| ..+.+++... ...+..+++++...|+.+++.++..
T Consensus 12 nLGRs~l~~~a~~a~~~~a~~Y---~nLE~dl~~G~Rg~R~~~v~~ll~~l----tgAeaA~VvNnnaAAv~L~l~~la~ 84 (367)
T PF03841_consen 12 NLGRSPLSEEAIEAVAEVASGY---SNLEYDLETGKRGSRYAHVEELLCEL----TGAEAALVVNNNAAAVLLALNTLAK 84 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccc---cccccccccccccccccccccccccc----ccccccccccccccccccccccccc
Confidence 3588889999999998877761 111243332322222 2223333222 2356788888888999999888864
Q ss_pred CCCCCCCeEEEcCCCCh------hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC-
Q psy13922 99 DVDGKKPGVLIPIPQYP------LYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPT- 171 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt- 171 (509)
. . .|++.--.-. ...+.++..|+++++|=... ...+++++++|.+ ++.+|+-.+++|-.
T Consensus 85 ~-~----EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e-----~Ta~ll~Vh~Sn~~i 150 (367)
T PF03841_consen 85 G-K----EVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITE-----NTAALLKVHTSNFRI 150 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-c----cccccccccccccccccccccccccccccccccccc----ccccccccccccc-----ccccccccccccccc
Confidence 3 2 6776532211 24567788899999986542 3457889999998 79888777777763
Q ss_pred -CCCCCHHHHHHHHHHHHHCCcEEEEcccCCccccc---CCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe
Q psy13922 172 -GQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYA---EGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR 247 (509)
Q Consensus 172 -G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr 247 (509)
|..-. -.++++++++++||+++++|..-+.+..- +-..-+++..... . +.+++++ |-.|.+ | |-.
T Consensus 151 ~GFt~~-~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~-~-----GaDlV~f-SGdKlL-G--GPQ 219 (367)
T PF03841_consen 151 QGFTGE-VSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLA-A-----GADLVTF-SGDKLL-G--GPQ 219 (367)
T ss_dssp -----------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCC-C-----T-SEEEE-ETTSSS-S--S-S
T ss_pred cccccc-ccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhh-c-----CCCEEEE-ECCCcC-C--CCC
Confidence 33211 25899999999999999999765333210 0000112222211 1 2335544 779999 4 334
Q ss_pred eEEEeeecCCHHHHHHHHHh
Q psy13922 248 GGYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 248 ~G~v~~~~~~~~~~~~l~~~ 267 (509)
.|.++ +.+++++++++.
T Consensus 220 aGiI~---Gkk~lI~~lk~~ 236 (367)
T PF03841_consen 220 AGIIV---GKKELIEKLKKH 236 (367)
T ss_dssp -EEEE---EEHHHHHHHHHH
T ss_pred eEEEE---eCHHHHHHHhhC
Confidence 68887 999999999864
No 387
>KOG1405|consensus
Probab=98.05 E-value=0.00014 Score=71.50 Aligned_cols=115 Identities=16% Similarity=0.233 Sum_probs=74.8
Q ss_pred HHHHHHHHHhhhcc-CCceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHH
Q psy13922 143 ISELERSITEARKH-CNPRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVE 220 (509)
Q Consensus 143 ~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~ 220 (509)
++++|+.|.+..++ ..+.+||+..-+...|- --|++..+.|.+++++|++.+|+||++.+..-+| ++.......-+
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG--k~WaHehw~l~ 332 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG--KFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC--ceeeehhcCCC
Confidence 67788888877654 35667777666777774 8899999999999999999999999998866554 23332222111
Q ss_pred hCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHH-HHHhhhcccCcch
Q psy13922 221 MGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAM-LHKSISAMLCPTV 276 (509)
Q Consensus 221 ~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~-l~~~~~~~~~~~~ 276 (509)
.. .+++ +|||-+- .| ||. .+++++-. -.+...+|.+-+.
T Consensus 333 ~P-----pD~v---TFSKK~q--~g---Gff----h~~~frpn~pYrifNTWmGdP~ 372 (484)
T KOG1405|consen 333 SP-----PDVV---TFSKKFQ--TG---GFF----HDEEFRPNEPYRIFNTWMGDPS 372 (484)
T ss_pred CC-----ccce---ehhhhhh--cC---ccc----cCcccCCCchHHHhhhhcCChH
Confidence 11 1233 7799883 44 666 46666642 3333344544443
No 388
>KOG3843|consensus
Probab=97.96 E-value=0.00054 Score=64.78 Aligned_cols=181 Identities=13% Similarity=0.062 Sum_probs=102.8
Q ss_pred cCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEec-CCCCCCCCCHHHHHH
Q psy13922 70 DGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYL-DESKQWGLPISELER 148 (509)
Q Consensus 70 ~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~L~~ 148 (509)
.|.+.-.+.+++.--+-..+.+.+.+++....+.+=.||.-.-.- +....+-.+|++++-+.. .+......|++.+++
T Consensus 70 ~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqk-s~~ksi~~agfepiiie~i~d~d~l~tdleav~~ 148 (432)
T KOG3843|consen 70 AGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQK-SCFKSIIHAGFEPIIIENILDGDELITDLEAVEA 148 (432)
T ss_pred hhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchH-HHHHHHHhcCCCceeeeccccchHHHHhHHHHHH
Confidence 366655666666533334566777777654432222344444332 333444557888777643 333334568999999
Q ss_pred HHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCc
Q psy13922 149 SITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSM 228 (509)
Q Consensus 149 ~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (509)
.+++. ...+|+...-....=..-+++.+++|+.||..|+++-|+..+|+.-. ++......-..++++.
T Consensus 149 ~iee~----g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqs----ee~i~~iaa~~~~gri---- 216 (432)
T KOG3843|consen 149 IIEEL----GEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQS----EECIHKIAAAAECGRI---- 216 (432)
T ss_pred HHHHh----CCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccch----HHHHHHHHHHhhhccH----
Confidence 88875 56655532111111123455889999999999999999999997521 1112222223344432
Q ss_pred eeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhh
Q psy13922 229 ELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSI 268 (509)
Q Consensus 229 ~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~ 268 (509)
+.+ +-|+-|.|. . ++|..++.+-+..++..+.+..
T Consensus 217 da~-vqsldknf~-v---pvggaiia~fk~n~iq~iak~y 251 (432)
T KOG3843|consen 217 DAF-VQSLDKNFM-V---PVGGAIIAAFKDNFIQEIAKMY 251 (432)
T ss_pred HHH-HHHhhhcce-e---ecchhHhhHhHHHHHHHHHHhC
Confidence 122 458999994 3 4555543223556666665543
No 389
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.75 E-value=0.021 Score=58.12 Aligned_cols=132 Identities=19% Similarity=0.227 Sum_probs=88.2
Q ss_pred CCCcccCCCCc-----chH----HHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC
Q psy13922 43 GQSVGSYTDSP-----GIE----IIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ 113 (509)
Q Consensus 43 ~~~~~~Y~~~~-----g~~----~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~ 113 (509)
+.++..|.|-+ |.. ++..-++++. | .+..|-=+--++|.+-+.+..+..-... ++++++++.-+
T Consensus 101 pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT----G--m~VANASm~DeaTAaAEAm~ma~r~~k~-k~~~~~V~~~v 173 (450)
T COG0403 101 PEWYTAYTPYQPEISQGRLEALFEFQTLVADLT----G--LDVANASMLDEATAAAEAMLMAKRVTKK-KRNKFLVPKDV 173 (450)
T ss_pred ccccccCCCCchhhhhHHHHHHHHHHHHHHHHh----C--CCcccchhhhhHHHHHHHHHHHHHhhcC-cCceEEecCCC
Confidence 56788888855 322 2333444444 5 3344444445666665555555544332 35699999999
Q ss_pred ChhHHHHHHhc----CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Q psy13922 114 YPLYSASLAEF----NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR 189 (509)
Q Consensus 114 y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~ 189 (509)
|+.+...++.. |.+++.++.+ |++.|+.. ... .+.++++..|+. .|.. .+++.+|.+.+++
T Consensus 174 hpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~-~~~----~~~gv~vQyP~~-~G~~--~~d~~~l~~~~h~ 238 (450)
T COG0403 174 HPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA-DDG----DVFGVLVQYPNT-FGIV--EEDLRALIEAAHS 238 (450)
T ss_pred CHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-ccc----CeEEEEEecCCC-CCcc--chhHHHHHHHHhh
Confidence 99998887643 6777777654 67777777 432 688999988874 5632 2569999999999
Q ss_pred CCcEEEE
Q psy13922 190 EKLFLFA 196 (509)
Q Consensus 190 ~~i~lI~ 196 (509)
++.++++
T Consensus 239 ~~al~~v 245 (450)
T COG0403 239 AGALVIV 245 (450)
T ss_pred cCCEEEE
Confidence 9988776
No 390
>KOG2467|consensus
Probab=97.74 E-value=0.0069 Score=60.12 Aligned_cols=144 Identities=18% Similarity=0.172 Sum_probs=87.0
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CC--CChhHHHHH--HhcC-----CEEEEEecCCCCCCCCCHHHHH
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IP--QYPLYSASL--AEFN-----MEQIGYYLDESKQWGLPISELE 147 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p--~y~~~~~~~--~~~g-----~~~~~v~~~~~~~~~~d~~~L~ 147 (509)
||-.-+|+ .|...+..++++|++ +|.-. -| .|-.+-..- +.-. ++-.++.++++ +.-+|.|.||
T Consensus 109 NVQp~SGS-PANfavYtall~Ph~----RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~-TG~IDYD~Le 182 (477)
T KOG2467|consen 109 NVQPYSGS-PANFAVYTALLKPHE----RIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPS-TGYIDYDKLE 182 (477)
T ss_pred eeccCCCC-chhhHHHhhhcCCCC----eeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCC-CCceehHHHH
Confidence 55556666 577789999999998 76533 23 332221111 1111 12223334444 3368999999
Q ss_pred HHHHhhhccCCceEEEEeCCCCCCCCCCCHH-HHHHHHHHHHHCCcEEEEcccCCc-ccccCCCccccHHHHHHHhCCCC
Q psy13922 148 RSITEARKHCNPRAIVIINPGNPTGQVLTKE-NIQDIIKFAHREKLFLFADEVYQD-NVYAEGSKFYSFKKVLVEMGEPY 225 (509)
Q Consensus 148 ~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~-~l~~l~~ia~~~~i~lI~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~ 225 (509)
+.-... +|++||.-. ..|++. +..++.+||.+-|.+++.|-++.. ++-.+ ..++..
T Consensus 183 ~~A~~f----rPk~iiaG~------SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~--vipsPF---------- 240 (477)
T KOG2467|consen 183 KTATLF----RPKLIIAGT------SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAG--VIPSPF---------- 240 (477)
T ss_pred HHHHhc----CCcEEEecc------ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcc--cCCCcc----------
Confidence 988876 899988532 233322 477888899999999999998854 22221 112222
Q ss_pred CCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 226 KSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 226 ~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
++.+++. .+.+|++ -|-|.|.+-+
T Consensus 241 ey~DiVT-TTTHKsL---RGPRg~mIFy 264 (477)
T KOG2467|consen 241 EYCDIVT-TTTHKSL---RGPRGAMIFY 264 (477)
T ss_pred cccceee-ccccccc---cCCcceeEEE
Confidence 2333554 4779977 5778888764
No 391
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.05 E-value=0.081 Score=59.98 Aligned_cols=125 Identities=13% Similarity=0.147 Sum_probs=73.5
Q ss_pred CCCcccCCCCc-----chH----HHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC
Q psy13922 43 GQSVGSYTDSP-----GIE----IIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ 113 (509)
Q Consensus 43 ~~~~~~Y~~~~-----g~~----~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~ 113 (509)
++++..|.|-+ |.. ++...++++. |. +..|-=+--|+|.+-+.++.+..-... ++++|+|+.-.
T Consensus 105 ~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt----Gm--~vaNASl~D~atA~aEA~~ma~~~~~~-k~~~~~v~~~~ 177 (954)
T PRK12566 105 PGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT----GL--DLANASLLDEATAAAEAMALAKRVAKS-KSNRFFVDEHC 177 (954)
T ss_pred chhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh----Cc--hhhhhhhccchhHHHHHHHHHHHHhhc-CCCEEEECCCC
Confidence 45666777744 333 3334444444 43 333332333444333333333322221 24589999999
Q ss_pred ChhHHHHHH----hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Q psy13922 114 YPLYSASLA----EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR 189 (509)
Q Consensus 114 y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~ 189 (509)
|+.+...++ ..|++++. +.+++.+.. ++.++++.+||. .|.+ +++++|++++++
T Consensus 178 hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~-----~~~~v~vq~P~~-~G~i---~d~~~i~~~~h~ 235 (954)
T PRK12566 178 HPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAH-----AVFGALLQYPDT-HGEI---RDLRPLIDQLHG 235 (954)
T ss_pred CHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCC-----CEEEEEEECCCC-ceEE---ccHHHHHHHHHH
Confidence 988877665 34777664 222233333 588888888875 6887 569999999999
Q ss_pred CCcEEEE
Q psy13922 190 EKLFLFA 196 (509)
Q Consensus 190 ~~i~lI~ 196 (509)
.|.++|+
T Consensus 236 ~gal~~~ 242 (954)
T PRK12566 236 QQALACV 242 (954)
T ss_pred cCCEEEE
Confidence 9988764
No 392
>PLN02672 methionine S-methyltransferase
Probab=96.00 E-value=0.18 Score=58.33 Aligned_cols=210 Identities=16% Similarity=0.075 Sum_probs=132.7
Q ss_pred HHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC---CCCCCCe
Q psy13922 30 VKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED---VDGKKPG 106 (509)
Q Consensus 30 v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~---gd~~~~~ 106 (509)
.+..+...++. ..+.-|.++.|...+|..||.|++..|++++++++|++.++-..|++.+++.+.-. -| +.-+
T Consensus 406 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 481 (1082)
T PLN02672 406 FLAYLASALKG---LSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVD-EHLT 481 (1082)
T ss_pred HHHHHHHHHcc---CCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhh-hhhh
Confidence 34455666666 66777999999999999999999999999999999999999999999999887421 11 0001
Q ss_pred EEEcCCCChhHHHHHHhcC--------CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 107 VLIPIPQYPLYSASLAEFN--------MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~g--------~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
-.++ .-|...+..-| ..+ .|-..+. ..+.+.+++++. ++++++..--. +-..+..
T Consensus 482 ~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~ 544 (1082)
T PLN02672 482 RWLP----KKWLTSLAIENATSDSKSDDVI-TVIEAPR-----QSDLVIELIKKL----KPQVVVTGMAD---FEMRTST 544 (1082)
T ss_pred ccCC----HHHHhHhhhhcccccCccCCeE-EEEeCCC-----cchHHHHHHHhC----CCeEEEEeccc---hhhhhHH
Confidence 1111 11222222111 222 2211111 234677788876 78888865332 3344556
Q ss_pred HHHHHHHHHHHCCcEEEEcccC-CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 179 NIQDIIKFAHREKLFLFADEVY-QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
..+.|.+.+++-|+.++.|..- -.+. +......+..+...-.. ..+..++.++-|.- =.+.+.+.+++ +-+
T Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~ 616 (1082)
T PLN02672 545 AFEHLLNVTAEIGARLFLDISDHLELS--SLPGSNGVLKYLAGHPL---PSHAAIICGLVKNQ-VYSDLEVAFVI--SEN 616 (1082)
T ss_pred HHHHHHHHHHhhCcEEEEehhhheeec--cCCCcccHHHHhcCCCC---CcchhHhhhhhhcc-ccccceEEEEe--cCc
Confidence 7899999999999999999763 3322 22223344444322111 12344455787766 36899999996 356
Q ss_pred HHHHHHHHHhh
Q psy13922 258 PGVKAMLHKSI 268 (509)
Q Consensus 258 ~~~~~~l~~~~ 268 (509)
..+...+.+..
T Consensus 617 ~~~~~~~~~~~ 627 (1082)
T PLN02672 617 EAVLKALSKTG 627 (1082)
T ss_pred HHHHHHHHHHH
Confidence 67777776543
No 393
>KOG2790|consensus
Probab=95.77 E-value=1.2 Score=43.35 Aligned_cols=202 Identities=14% Similarity=0.041 Sum_probs=107.3
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcc----cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVG----SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~----~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 97 (509)
|+..+|+.|+..+.+-+-+..+...+ +..+.+. ..+.+.....+++.+.++-.-+-+++-.|+|.-+..+...|.
T Consensus 14 GPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f-~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~ 92 (370)
T KOG2790|consen 14 GPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDF-AKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLI 92 (370)
T ss_pred CcccCCHHHHHHHHHHhhccCCCcceEEEecccchhH-HHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhh
Confidence 66779999999888877774432221 0122222 344555555555555544333334556777888887777776
Q ss_pred --cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCC--CCCHHHHHHHHHhhhccCCceEEEEeCCCCCC--
Q psy13922 98 --EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQW--GLPISELERSITEARKHCNPRAIVIINPGNPT-- 171 (509)
Q Consensus 98 --~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~--~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt-- 171 (509)
+.|+ ..+-|++..++--.+.++-+......+.++..+. .| -+|.+.++. .. +.+.++.| .|.|
T Consensus 93 glK~g~-~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y-~ygkvPd~~~w~~--~~-----da~yvyyC--aNETVH 161 (370)
T KOG2790|consen 93 GLKHGR-CADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSY-TYGKVPDPSTWEL--NP-----DASYVYYC--ANETVH 161 (370)
T ss_pred ccccCC-ccceEEeccccHHHHHHHHhhCCceEEecccccc-ccCcCCChhhccc--CC-----CccEEEEe--cCceee
Confidence 3442 2235777776666666655544555665555433 22 245554432 11 34555555 4444
Q ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 172 GQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 172 G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
|+-++.-. .-.-.+.++|.|-.--.+. .+..+... -+++.+.-|.+ |++|+.+=.+
T Consensus 162 GVEf~~~P------~~~~~~~vlVaDmSSnflS-----rpvDvsk~------------gvi~aGAQKN~-G~aG~Tvviv 217 (370)
T KOG2790|consen 162 GVEFDFIP------VNDPKGAVLVADMSSNFLS-----RPVDVSKF------------GVIFAGAQKNV-GPAGVTVVIV 217 (370)
T ss_pred ceecCCCC------CCCCCCceEEEecccchhc-----CCccchhc------------ceEEecccccc-CccccEEEEE
Confidence 55433111 1123578888885443322 12222221 34466779999 8998754433
Q ss_pred eeecCCHHHHHHH
Q psy13922 252 EVINLDPGVKAML 264 (509)
Q Consensus 252 ~~~~~~~~~~~~l 264 (509)
...++...
T Consensus 218 -----r~dllg~~ 225 (370)
T KOG2790|consen 218 -----RKDLLGNA 225 (370)
T ss_pred -----ehhhhccc
Confidence 55555433
No 394
>KOG2040|consensus
Probab=95.73 E-value=3.8 Score=44.29 Aligned_cols=143 Identities=19% Similarity=0.312 Sum_probs=99.4
Q ss_pred cCCCC---cchHHHHHHHHHHHhhhcCCCCCCCcEEEe--CCH---HHHHHHHHHHh-hcCCCCCCCeEEEcCCCChhHH
Q psy13922 48 SYTDS---PGIEIIRRHVAQYISRRDGQPADWQDVILS--AGA---SDGIKSVLKLL-IEDVDGKKPGVLIPIPQYPLYS 118 (509)
Q Consensus 48 ~Y~~~---~g~~~lr~~va~~l~~~~g~~~~~~~i~~t--~G~---~~al~~~~~~l-~~~gd~~~~~Vlv~~p~y~~~~ 118 (509)
-|.|. +|+.++-..+.+.|-.--| -+.+-+- +|+ ..++ .+++++ ...|++.+...++|...|...-
T Consensus 570 PF~P~eQaqGY~~lf~~Le~~Lc~iTG----~D~~s~QPNsGA~GEYaGL-~~IRaY~~~kge~hRnvClIPvSAHGTNP 644 (1001)
T KOG2040|consen 570 PFAPVEQAQGYQQLFTELEKDLCEITG----FDSFSLQPNSGAQGEYAGL-RVIRAYLESKGEGHRNVCLIPVSAHGTNP 644 (1001)
T ss_pred CCCchHHHhhHHHHHHHHHHHhheeec----ccceeecCCCCcccchhhH-HHHHHHHHhccCCcceeEEEeecccCCCh
Confidence 35553 4767777777766644333 2334332 232 3344 334444 3456655666778888888888
Q ss_pred HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 119 ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 119 ~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
..+..+|.++++|..+..+ .+|...|....+++.+ +..++.++.|+.- |+. .+.+++++++.+++|--|..|-
T Consensus 645 ASA~MagmkvvpV~~~~~G--~id~~dLk~kaekh~~--~Laa~MvTYPST~-Gvf--E~~i~d~cd~iHehGGQVYlDG 717 (1001)
T KOG2040|consen 645 ASAAMAGMKVVPVGCDANG--NIDMVDLKAKAEKHKD--NLAALMVTYPSTH-GVF--EEGIDDICDIIHEHGGQVYLDG 717 (1001)
T ss_pred hhHHhcCCEEEEeeccCCC--CccHHHHHHHHHHhhh--hhheeEEeccccc-ccc--cccHHHHHHHHHhcCCEEEecC
Confidence 8899999999999988665 7899999988776544 6788888888653 443 2569999999999999999997
Q ss_pred cCCc
Q psy13922 199 VYQD 202 (509)
Q Consensus 199 ay~~ 202 (509)
+-..
T Consensus 718 ANMN 721 (1001)
T KOG2040|consen 718 ANMN 721 (1001)
T ss_pred CCcc
Confidence 7544
No 395
>KOG3846|consensus
Probab=91.84 E-value=14 Score=36.46 Aligned_cols=163 Identities=15% Similarity=0.087 Sum_probs=105.7
Q ss_pred CHHHHHHHHHHHhccc---C-CCcc-cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 27 PDDVKQRAQAVLDGCR---G-QSVG-SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~---~-~~~~-~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
|-...+.+.+-+.++. . ++.. .-+-..+....-.-++... | ...++|.+.++-|-.++.++.++.+|..
T Consensus 80 PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV----G--A~e~EvavmNsLTvNlh~Ll~sFyKPTe 153 (465)
T KOG3846|consen 80 PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV----G--AQENEVAVMNSLTVNLHSLLISFYKPTE 153 (465)
T ss_pred chhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc----c--CCchhhhhHhhhhhHHHHHHHHhcCCcc
Confidence 6666666766666621 1 1111 1122334445555566555 3 5678999999999999999999999986
Q ss_pred CCCCeEEEcCCCChh----HHHHHHhcCCEE----EEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 102 GKKPGVLIPIPQYPL----YSASLAEFNMEQ----IGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~----~~~~~~~~g~~~----~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
++-+|+...-.|++ +...++..|..+ +.+... ++.-.+-.+.+.+.|++.++ ...+|.++..+.-||+
T Consensus 154 -kR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePR-EGEetlRteDILd~IEkngD--eiA~v~fSGvqyYTGQ 229 (465)
T KOG3846|consen 154 -KRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPR-EGEETLRTEDILDTIEKNGD--EIALVCFSGVQYYTGQ 229 (465)
T ss_pred -hhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEeccc-ccccchhHHHHHHHHHhcCC--eEEEEEeecceeeccc
Confidence 55578888766665 344455556542 222221 12224556777778876433 4666677999999999
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCCc
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQD 202 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~~ 202 (509)
.++ +.+|...-+..|++|=.|-++..
T Consensus 230 ~Fd---i~aIT~Agq~kgc~VGfDLAHAv 255 (465)
T KOG3846|consen 230 YFD---IGAITFAGQFKGCLVGFDLAHAV 255 (465)
T ss_pred ccc---hhhhhhcccCCCcEechhhhhhh
Confidence 988 77777555556899988887765
No 396
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=91.54 E-value=7.8 Score=36.49 Aligned_cols=156 Identities=16% Similarity=0.121 Sum_probs=95.8
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc---CC-CCh-------hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHH
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIP---IP-QYP-------LYSASLAEFNMEQIGYYLDESKQWGLPISELE 147 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~---~p-~y~-------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~ 147 (509)
+.+-+|+-.+..++..++...-+ =..+++. .+ +|. .....++..|..++....... ..-..+.|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~G~e--V~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 4 IALYSGGKDSFYALYLALEEGHE--VVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEecCcHHHHHHHHHHHcCCe--eEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence 67788999998777777754221 0011221 11 122 223456778999888876642 123578888
Q ss_pred HHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCC
Q psy13922 148 RSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKS 227 (509)
Q Consensus 148 ~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (509)
+++++. +..+|+ +|.+++..+..++-++|++-|+-++. .+.- .+...+..++-.. +
T Consensus 80 ~~l~~l----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~-----PLWg------~d~~ell~e~~~~--G 135 (223)
T COG2102 80 EALRRL----KVDGIV-------AGAIASEYQKERVERLCEELGLKVYA-----PLWG------RDPEELLEEMVEA--G 135 (223)
T ss_pred HHHHhC----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEee-----cccC------CCHHHHHHHHHHc--C
Confidence 888875 566776 79999999999999999999988654 2221 1122222222111 3
Q ss_pred ceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 228 MELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 228 ~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.+++++ +.||. |++.-=+|.-+ +.++++.+..+..
T Consensus 136 f~~~Iv-~Vsa~--gL~~~~lGr~i----~~~~~e~l~~l~~ 170 (223)
T COG2102 136 FEAIIV-AVSAE--GLDESWLGRRI----DREFLEELKSLNR 170 (223)
T ss_pred CeEEEE-EEecc--CCChHHhCCcc----CHHHHHHHHHHHH
Confidence 457766 65665 55543355553 7888888887644
No 397
>KOG1201|consensus
Probab=83.43 E-value=39 Score=33.44 Aligned_cols=141 Identities=18% Similarity=0.185 Sum_probs=80.1
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL---YSASLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
+..+-|++|.||...=..+..-+.+.|. ++++-+-+-.+ +...++..| ++..+..|=. |.+++.+..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~----~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis-----~~eei~~~a 105 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA----KLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS-----DREEIYRLA 105 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC----eEEEEeccccchHHHHHHHHhcC-ceeEEEecCC-----CHHHHHHHH
Confidence 4556789999998888888888888775 66554433233 344444445 5666655533 445555444
Q ss_pred HhhhccCCceEEEEeCCCCCCC---CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCC
Q psy13922 151 TEARKHCNPRAIVIINPGNPTG---QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKS 227 (509)
Q Consensus 151 ~~~~~~~~~~~ivi~~p~NPtG---~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (509)
++..++-..-=|++||..=.++ .-.+++++++..++=- .+ .+.....+.|.+-.. ++
T Consensus 106 ~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~-----------~~--------~f~t~kaFLP~M~~~-~~ 165 (300)
T KOG1201|consen 106 KKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNT-----------IA--------HFWTTKAFLPKMLEN-NN 165 (300)
T ss_pred HHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhh-----------HH--------HHHHHHHHhHHHHhc-CC
Confidence 4333322333445565533333 4577788888776421 11 233344555655443 25
Q ss_pred ceeEEEEecccccCCCCC
Q psy13922 228 MELASFMSCSKGYMGECG 245 (509)
Q Consensus 228 ~~vi~i~S~SK~~~G~~G 245 (509)
+++|.+.|..=.+ |.+|
T Consensus 166 GHIV~IaS~aG~~-g~~g 182 (300)
T KOG1201|consen 166 GHIVTIASVAGLF-GPAG 182 (300)
T ss_pred ceEEEehhhhccc-CCcc
Confidence 6788887866666 5665
No 398
>PRK08265 short chain dehydrogenase; Provisional
Probab=76.83 E-value=45 Score=32.01 Aligned_cols=101 Identities=14% Similarity=0.007 Sum_probs=56.5
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 76 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGA----RVAIVDIDADNGAAVAASLGERARFIATDIT-----DDAAIERAVATVVA 76 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhCCeeEEEEecCC-----CHHHHHHHHHHHHH
Confidence 34677777766666667777887776 7877654433344444555656666665533 56777776665322
Q ss_pred c-CCceEEEEeCC-CCCCCCCCCHHHHHHHHH
Q psy13922 156 H-CNPRAIVIINP-GNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 156 ~-~~~~~ivi~~p-~NPtG~~~s~~~l~~l~~ 185 (509)
. .++.+++-+.. ..+.+...+.+++++..+
T Consensus 77 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 77 RFGRVDILVNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHh
Confidence 2 24566554321 122233445555555443
No 399
>KOG1465|consensus
Probab=75.98 E-value=86 Score=31.05 Aligned_cols=153 Identities=13% Similarity=0.127 Sum_probs=92.3
Q ss_pred HHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhc----CC----------CCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 31 KQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRD----GQ----------PADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 31 ~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~----g~----------~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
.+.+...+++.+......|....+..++|+.+-+-+++.. +. .+..++|++|.|.+..+...+...
T Consensus 103 ~~Sl~kLl~~~~e~~~~~~~S~~~~~~lr~~~i~~I~eli~Eie~~~E~Ia~Qa~ehihsnEviLT~g~SrTV~~FL~~A 182 (353)
T KOG1465|consen 103 SESLHKLLQSTEESHTNKKLSSADAKKLRKDLIEGIKELITEIEGSRENIAVQAIEHIHSNEVILTLGSSRTVENFLKHA 182 (353)
T ss_pred HHHHHHHHhCCCccccccccccccHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHhccCceEEecCccHHHHHHHHHH
Confidence 3356666666443334445555555556665554443321 11 134568999999998888888777
Q ss_pred hcCCCCCCCeEEEc--CCCChhHHHHH--HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 97 IEDVDGKKPGVLIP--IPQYPLYSASL--AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~--~p~y~~~~~~~--~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
.+.+. +=+|+|. .|.+.++..+. ...|++..-++ | .++-+.+.+ -.|+|+-..---+.|
T Consensus 183 ~kk~R--kf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~Msr-----VnKVIigt~avl~NG 245 (353)
T KOG1465|consen 183 AKKGR--KFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMSR-----VNKVIIGTHAVLANG 245 (353)
T ss_pred HhccC--ceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhhh-----cceEEEEeeeEecCC
Confidence 76652 3356665 36655543332 24577766554 2 445556665 356666555544555
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
-+....-...++-.|++|-+++|+=.-.
T Consensus 246 gl~~~~G~~~vAlaAk~h~vPv~VlAp~ 273 (353)
T KOG1465|consen 246 GLRAPSGVHTVALAAKHHSVPVIVLAPM 273 (353)
T ss_pred CeeccchHHHHHHHHHhcCCcEEEecch
Confidence 5666667778888889999998885443
No 400
>KOG2040|consensus
Probab=75.20 E-value=1.4e+02 Score=32.99 Aligned_cols=73 Identities=12% Similarity=0.259 Sum_probs=45.5
Q ss_pred CCeEEEcCCCChhHHHHHHhc----CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 104 KPGVLIPIPQYPLYSASLAEF----NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
+++.++...+|+.....++.. |.+++.. |+.+... ..+ .+..+++-.|.. -|.+.+
T Consensus 205 rkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~~~~~~~-s~~-----~v~gvlvQYP~t-~G~i~d--- 264 (1001)
T KOG2040|consen 205 RKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------DIKEADY-SSK-----DVSGVLVQYPDT-EGSVLD--- 264 (1001)
T ss_pred cceEEecCCCCcchhhhhhccccccceeEEec----------CHHHhhc-ccc-----ceeEEEEEcCCC-CCcccC---
Confidence 347889999998887776532 3332221 2222211 112 567777776655 477766
Q ss_pred HHHHHHHHHHCCcEEEE
Q psy13922 180 IQDIIKFAHREKLFLFA 196 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~ 196 (509)
.+++++.+++.+.++++
T Consensus 265 ~~el~~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 265 FDELVELAHANGSLVVM 281 (1001)
T ss_pred HHHHHHHhhccCceEEE
Confidence 78888888899888776
No 401
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=71.32 E-value=38 Score=31.94 Aligned_cols=96 Identities=16% Similarity=0.193 Sum_probs=54.6
Q ss_pred EEEeCC-HHHHHHHHHHHhhcCCCCCCCeEE-EcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 79 VILSAG-ASDGIKSVLKLLIEDVDGKKPGVL-IPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 79 i~~t~G-~~~al~~~~~~l~~~gd~~~~~Vl-v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
|+++.+ |..+ ..+++.|...+- .|. +.-+.-......++..|++++..+.+ |.+.|.++++.
T Consensus 1 I~V~GatG~~G-~~v~~~L~~~~~----~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~g---- 64 (233)
T PF05368_consen 1 ILVTGATGNQG-RSVVRALLSAGF----SVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALKG---- 64 (233)
T ss_dssp EEEETTTSHHH-HHHHHHHHHTTG----CEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHTT----
T ss_pred CEEECCccHHH-HHHHHHHHhCCC----CcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHcC----
Confidence 445544 3333 455666665543 333 33333233455567789998865433 78999999885
Q ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEE
Q psy13922 157 CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI 195 (509)
..++++..+.+. .-..+.-..+++.|++.|+-.+
T Consensus 65 --~d~v~~~~~~~~---~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 65 --VDAVFSVTPPSH---PSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp --CSEEEEESSCSC---CCHHHHHHHHHHHHHHHT-SEE
T ss_pred --CceEEeecCcch---hhhhhhhhhHHHhhhccccceE
Confidence 666676555332 2223556778888887765444
No 402
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=70.69 E-value=63 Score=28.26 Aligned_cols=100 Identities=13% Similarity=0.052 Sum_probs=59.5
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC--ChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ--YPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~--y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
.+++|.|++..=..+.+.|.+.|+ ..|++.... ..... ..++..+.++..++.|-. |.+.+++.++.
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~---~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 73 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA---RVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS-----DPESIRALIEE 73 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT---EEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT-----SHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc---eEEEEeeeccccccccccccccccccccccccccccc-----ccccccccccc
Confidence 367777777666677777777754 144444444 23233 334556888888887643 77888888877
Q ss_pred hhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
..+. ....+++.+....+.+. .++.+++++..+
T Consensus 74 ~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~ 109 (167)
T PF00106_consen 74 VIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFR 109 (167)
T ss_dssp HHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccchhhhhccc
Confidence 5432 45667665544333332 344566666555
No 403
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=68.52 E-value=48 Score=26.74 Aligned_cols=70 Identities=11% Similarity=0.090 Sum_probs=47.4
Q ss_pred CCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHC
Q psy13922 112 PQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVI-INPGNPTGQVLTKENIQDIIKFAHRE 190 (509)
Q Consensus 112 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~ 190 (509)
.....|...++..|.+.+.. ...+++.-....|+..+.+ +++||+ ++..+ -+-...+-+.|+++
T Consensus 10 ~~~~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~~------aD~VIv~t~~vs-------H~~~~~vk~~akk~ 74 (97)
T PF10087_consen 10 DRERRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIKK------ADLVIVFTDYVS-------HNAMWKVKKAAKKY 74 (97)
T ss_pred ccHHHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcCC------CCEEEEEeCCcC-------hHHHHHHHHHHHHc
Confidence 45556888899999999887 2222223233457777664 777775 44332 25578888999999
Q ss_pred CcEEEE
Q psy13922 191 KLFLFA 196 (509)
Q Consensus 191 ~i~lI~ 196 (509)
|++++.
T Consensus 75 ~ip~~~ 80 (97)
T PF10087_consen 75 GIPIIY 80 (97)
T ss_pred CCcEEE
Confidence 999876
No 404
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=66.73 E-value=14 Score=37.31 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=28.8
Q ss_pred hhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHH
Q psy13922 457 LERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFH 501 (509)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~ 501 (509)
+...||.+.++..|+ ..|..|+||+++. +++.+..++.|++++
T Consensus 289 l~~~gi~v~~~~~f~-~~~~~~iRis~~~-~~~~~~l~~al~~~~ 331 (332)
T PRK06425 289 LLKNGILVRLLDDYE-CLGEQYIRIAIRR-RSFNIKLVNALRNFL 331 (332)
T ss_pred HHHCCeEEEECCCCC-CCCCCEEEEEeCC-HHHHHHHHHHHHHHh
Confidence 334577777887775 2345699999985 456666666666543
No 405
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=66.21 E-value=83 Score=29.41 Aligned_cols=101 Identities=13% Similarity=0.073 Sum_probs=58.2
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
+....|++..||..|...+ +.|.+.|. .|.+.+|....-...+...| ++..+... | +.+.+ .
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga----~VtVvsp~~~~~l~~l~~~~-~i~~~~~~----~--~~~dl----~-- 68 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGA----QLRVIAEELESELTLLAEQG-GITWLARC----F--DADIL----E-- 68 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCC----EEEEEcCCCCHHHHHHHHcC-CEEEEeCC----C--CHHHh----C--
Confidence 3445788888888887655 56666665 78887887665444444344 33333221 1 22222 1
Q ss_pred hccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEE-Ecc-cCCccc
Q psy13922 154 RKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF-ADE-VYQDNV 204 (509)
Q Consensus 154 ~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI-~De-ay~~~~ 204 (509)
...+ ++..++++ +-=..+...|++.++++- +|+ ..++|.
T Consensus 69 ----~~~l-Vi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~e~~~f~ 109 (205)
T TIGR01470 69 ----GAFL-VIAATDDE-------ELNRRVAHAARARGVPVNVVDDPELCSFI 109 (205)
T ss_pred ----CcEE-EEECCCCH-------HHHHHHHHHHHHcCCEEEECCCcccCeEE
Confidence 2334 44556654 335789999999998883 443 334443
No 406
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=66.09 E-value=1.2e+02 Score=30.50 Aligned_cols=105 Identities=20% Similarity=0.178 Sum_probs=65.3
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC--CCChhHH--HHHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI--PQYPLYS--ASLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~--p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
+..+++++|.|.+.....++....+.+. +-+|++.+ |...+.. ..+...|.++..++- ..+-..
T Consensus 118 i~~g~~ILT~~~S~tv~~~l~~A~~~~k--~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~D----------sav~~~ 185 (310)
T PRK08535 118 IRDGDVIMTHCNSSAALSVIKTAHEQGK--DIEVIATETRPRNQGHITAKELAEYGIPVTLIVD----------SAVRYF 185 (310)
T ss_pred cCCCCEEEEeCCcHHHHHHHHHHHHCCC--eEEEEEecCCchhhHHHHHHHHHHCCCCEEEEeh----------hHHHHH
Confidence 3456788888877666666666655442 33566653 5555522 334566888877652 233334
Q ss_pred HHhhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 150 ITEARKHCNPRAIVI-INPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 150 i~~~~~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
+. ++..+++ ..---..|.++++----.++-.|+.+++++++
T Consensus 186 m~------~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 186 MK------DVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred HH------hCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 44 3666666 34445567777776667788889999988876
No 407
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=64.78 E-value=95 Score=31.09 Aligned_cols=59 Identities=14% Similarity=0.212 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 139 WGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 139 ~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
..++.+++++.++...+. ..-.+++++ -+=|.| ++.+.+.+|+++|++.++.+++|..-
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDIVVLS-GSLPPG--VPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCC--CCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 467778887777665442 344555553 344443 45688999999999999999999553
No 408
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=63.04 E-value=1e+02 Score=29.37 Aligned_cols=100 Identities=18% Similarity=0.247 Sum_probs=67.1
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEE--cCC----C--Ch-----hHHHHHHhcCCEEEEEecCCCCCCCCCHHH
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLI--PIP----Q--YP-----LYSASLAEFNMEQIGYYLDESKQWGLPISE 145 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv--~~p----~--y~-----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 145 (509)
++..+||-.+..++.++..+ .+ .+.+ ..| . |+ -....++..|..++.++.... ..--.+.
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~----v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~ 76 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HE----VISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEE 76 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-Ce----eEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHH
Confidence 56779999999888888776 43 3222 111 1 21 123556778999887765422 1213566
Q ss_pred HHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 146 LERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 146 L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
|.+++++. .+.+|+ +|.+.+......+-++|.+.|+..+.
T Consensus 77 l~~~l~~~----gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~~ 116 (223)
T TIGR00290 77 LKGILHTL----DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSFA 116 (223)
T ss_pred HHHHHHHc----CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEec
Confidence 77777664 566666 78999999999999999999887664
No 409
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=62.91 E-value=17 Score=36.22 Aligned_cols=71 Identities=18% Similarity=0.414 Sum_probs=49.9
Q ss_pred HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 117 YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 117 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
+.+.+...+.++..+.+.++.+|.+....+.++-+.. .. .++ .+.|-.|+++++++|++.|+++||-||-
T Consensus 21 ~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g-----~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 21 TIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKG-----GQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhc-----cc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 3455566789999998887777877766655443331 10 111 2345699999999999999999999886
Q ss_pred c
Q psy13922 197 D 197 (509)
Q Consensus 197 D 197 (509)
.
T Consensus 91 E 91 (303)
T cd02742 91 E 91 (303)
T ss_pred e
Confidence 4
No 410
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=62.43 E-value=1.6e+02 Score=29.48 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=62.8
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC--CCChhH--HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI--PQYPLY--SASLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~--p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|-+.....+++...+.|. +-+|++.+ |.+.+. ...+...|.++..++- ..+-..+
T Consensus 114 ~~g~~ILT~~~S~tv~~~l~~a~~~~~--~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~D----------sa~~~~m 181 (301)
T TIGR00511 114 RDGDVVMTHCNSEAALSVIKTAFEQGK--DIEVIATETRPRKQGHITAKELRDYGIPVTLIVD----------SAVRYFM 181 (301)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCC--cEEEEEecCCCcchHHHHHHHHHHCCCCEEEEeh----------hHHHHHH
Confidence 445788887766666666666555442 33566653 666553 2334556887777641 2333344
Q ss_pred HhhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 151 TEARKHCNPRAIVI-INPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 151 ~~~~~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
. ++..+++ ..---..|.++++----.++-.|+.+++++++
T Consensus 182 ~------~vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 182 K------EVDHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred H------hCCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 4 3556665 34444456666666666788888999988876
No 411
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=61.38 E-value=1.1e+02 Score=30.66 Aligned_cols=107 Identities=14% Similarity=0.090 Sum_probs=63.7
Q ss_pred CCCcEEEeCCHH--------HHHHHHHHHhhcCCCCCCCeEEEc--CCCChh-H--HHHHHhcCCEEEEEecCCCCCCCC
Q psy13922 75 DWQDVILSAGAS--------DGIKSVLKLLIEDVDGKKPGVLIP--IPQYPL-Y--SASLAEFNMEQIGYYLDESKQWGL 141 (509)
Q Consensus 75 ~~~~i~~t~G~~--------~al~~~~~~l~~~gd~~~~~Vlv~--~p~y~~-~--~~~~~~~g~~~~~v~~~~~~~~~~ 141 (509)
...++++|.|-+ .....+++...+.|. +-+|++. .|.+.+ . ...+...|.++..++-
T Consensus 117 ~~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g~--~~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI~D-------- 186 (303)
T TIGR00524 117 KDGDTVLTHCNAGALATSDYGTALGVIRSAWEDGK--RIRVIACETRPRNQGSRLTAWELMQDGIDVTLITD-------- 186 (303)
T ss_pred cCCCEEEEecCCccccccCcchHHHHHHHHHHcCC--ceEEEECCCCCccchHHHHHHHHHHCCCCEEEECh--------
Confidence 445688887765 333334445544442 3467765 477766 2 3445567887776641
Q ss_pred CHHHHHHHHHhhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 142 PISELERSITEARKHCNPRAIVI-INPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 142 d~~~L~~~i~~~~~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
..+-..+... ++..+++ ..--...|.++++----.++-+|+.+++++++=
T Consensus 187 --sa~~~~m~~~----~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 187 --SMAAYFMQKG----EIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred --hHHHHHcccc----CCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEe
Confidence 2333334422 4666666 344455566666666677888889999888863
No 412
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=61.24 E-value=15 Score=37.16 Aligned_cols=72 Identities=18% Similarity=0.371 Sum_probs=49.8
Q ss_pred HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 117 YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 117 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
+.+.+...+.++..+.+.++.+|.+.+....++-.. .. . .....+.|-.||++++++|++.|+++||-||-
T Consensus 23 ~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~-----ga---~-~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 23 YIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEI-----GG---S-TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHHHhCCcEEEEEeecCCcceeeecCccccccc-----cc---c-cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 345556678899999888777787765555433211 00 0 11234556789999999999999999999886
Q ss_pred c
Q psy13922 197 D 197 (509)
Q Consensus 197 D 197 (509)
.
T Consensus 94 E 94 (329)
T cd06568 94 E 94 (329)
T ss_pred e
Confidence 4
No 413
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=60.97 E-value=15 Score=37.47 Aligned_cols=67 Identities=12% Similarity=0.266 Sum_probs=49.2
Q ss_pred HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 117 YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 117 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
+.+.+...+.++..+.+.++.+|.+.+..+.++-.. . ....|-.|+++++++|++.|+++||-||-
T Consensus 23 ~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~-----g---------a~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 23 TIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKK-----G---------AYSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhc-----c---------CcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 345556678899999888777788876666543322 1 11246789999999999999999999886
Q ss_pred c
Q psy13922 197 D 197 (509)
Q Consensus 197 D 197 (509)
.
T Consensus 89 E 89 (348)
T cd06562 89 E 89 (348)
T ss_pred e
Confidence 4
No 414
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=60.06 E-value=15 Score=36.85 Aligned_cols=64 Identities=11% Similarity=0.304 Sum_probs=45.2
Q ss_pred HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 118 SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 118 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
.+.+...+.++..+.+.++.+|.+....+.++-+. . ..|..|+++++++|++.|+++||-||-.
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~-----g-----------~~~~~yT~~di~elv~yA~~rgI~vIPE 87 (311)
T cd06570 24 LDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQK-----A-----------SDGLYYTQEQIREVVAYARDRGIRVVPE 87 (311)
T ss_pred HHHHHHhCCeEEEEEEecCCCceeecCCCcccccc-----C-----------CCCCccCHHHHHHHHHHHHHcCCEEEEe
Confidence 34455668888888887776777665444332111 0 1356799999999999999999988863
No 415
>PRK05872 short chain dehydrogenase; Provisional
Probab=59.10 E-value=1.5e+02 Score=29.00 Aligned_cols=102 Identities=12% Similarity=0.058 Sum_probs=56.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc--CCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF--NMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+.. +.++..+..|- -|.+.+++.+++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 78 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA----KLALVDLEEAELAALAAELGGDDRVLTVVADV-----TDLAAMQAAAEE 78 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-----CCHHHHHHHHHH
Confidence 345688887776666677777877776 7877765544444444444 34555544442 267777777665
Q ss_pred hhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
..+. .++.++|.+.-....+. ..+.+++++..+
T Consensus 79 ~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~ 114 (296)
T PRK05872 79 AVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVID 114 (296)
T ss_pred HHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHH
Confidence 3222 35666664322222121 234455555443
No 416
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=59.08 E-value=2.4e+02 Score=29.64 Aligned_cols=102 Identities=12% Similarity=0.108 Sum_probs=51.9
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCc
Q psy13922 84 GASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNP 159 (509)
Q Consensus 84 G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~ 159 (509)
|=|-.+..+...+...|. +-.++..++.-.+.... ++..|+.++.. .+.+.+.+.+.......+.
T Consensus 253 GKTTTiaKLA~~L~~~Gk--kVglI~aDt~RiaAvEQLk~yae~lgipv~v~---------~d~~~L~~aL~~lk~~~~~ 321 (436)
T PRK11889 253 GKTTTLAKMAWQFHGKKK--TVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV---------RDEAAMTRALTYFKEEARV 321 (436)
T ss_pred cHHHHHHHHHHHHHHcCC--cEEEEecCCcchHHHHHHHHHhhhcCCcEEec---------CCHHHHHHHHHHHHhccCC
Confidence 335555555555655543 11233334433233333 23445554432 2567777777654221146
Q ss_pred eEEEEeCC-CCCCCCCCCHHHHHHHHHHHHH---CCcEEEEcccC
Q psy13922 160 RAIVIINP-GNPTGQVLTKENIQDIIKFAHR---EKLFLFADEVY 200 (509)
Q Consensus 160 ~~ivi~~p-~NPtG~~~s~~~l~~l~~ia~~---~~i~lI~Deay 200 (509)
..|+|..+ .|+ -+.+.++++.++.+. +.++++.|...
T Consensus 322 DvVLIDTaGRs~----kd~~lm~EL~~~lk~~~PdevlLVLsATt 362 (436)
T PRK11889 322 DYILIDTAGKNY----RASETVEEMIETMGQVEPDYICLTLSASM 362 (436)
T ss_pred CEEEEeCccccC----cCHHHHHHHHHHHhhcCCCeEEEEECCcc
Confidence 78888655 333 233456666666543 46777777654
No 417
>PRK08862 short chain dehydrogenase; Provisional
Probab=58.88 E-value=1.3e+02 Score=28.26 Aligned_cols=80 Identities=5% Similarity=0.037 Sum_probs=48.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|+...-..+.+.|.+.|. .|++..-+-...... ++..+.++..+..|-. |.+.+++.++..
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~----~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~-----~~~~~~~~~~~~ 76 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGA----TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDF-----SQESIRHLFDAI 76 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCC-----CHHHHHHHHHHH
Confidence 4677777777666677777888887 888765543333222 3344666666666533 677777777654
Q ss_pred hcc-C-CceEEEEe
Q psy13922 154 RKH-C-NPRAIVII 165 (509)
Q Consensus 154 ~~~-~-~~~~ivi~ 165 (509)
.+. . ++.+++.+
T Consensus 77 ~~~~g~~iD~li~n 90 (227)
T PRK08862 77 EQQFNRAPDVLVNN 90 (227)
T ss_pred HHHhCCCCCEEEEC
Confidence 332 2 46654433
No 418
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=58.82 E-value=2.3e+02 Score=29.69 Aligned_cols=93 Identities=18% Similarity=0.285 Sum_probs=56.9
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCC
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCN 158 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~ 158 (509)
++++.| +...++++.|.+.|- ..|.+.+=++......++..|++++. ++++...+.+
T Consensus 182 lvIGAG--em~~lva~~L~~~g~---~~i~IaNRT~erA~~La~~~~~~~~~------------l~el~~~l~~------ 238 (414)
T COG0373 182 LVIGAG--EMGELVAKHLAEKGV---KKITIANRTLERAEELAKKLGAEAVA------------LEELLEALAE------ 238 (414)
T ss_pred EEEccc--HHHHHHHHHHHhCCC---CEEEEEcCCHHHHHHHHHHhCCeeec------------HHHHHHhhhh------
Confidence 344444 566778888988762 28999999999999999999965553 4555555554
Q ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 159 PRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
..+|+.+ -+-|+ .+++.+.+++..+.-+ + ++++|-+
T Consensus 239 ~DvViss-Tsa~~-~ii~~~~ve~a~~~r~--~-~livDia 274 (414)
T COG0373 239 ADVVISS-TSAPH-PIITREMVERALKIRK--R-LLIVDIA 274 (414)
T ss_pred CCEEEEe-cCCCc-cccCHHHHHHHHhccc--C-eEEEEec
Confidence 4555543 11111 2455566666555322 2 6677643
No 419
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=58.39 E-value=1e+02 Score=30.79 Aligned_cols=78 Identities=12% Similarity=-0.044 Sum_probs=42.0
Q ss_pred chHHHHHHHHHHHhhhcCCCCCCCcEEE-eCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEe
Q psy13922 54 GIEIIRRHVAQYISRRDGQPADWQDVIL-SAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYY 132 (509)
Q Consensus 54 g~~~lr~~va~~l~~~~g~~~~~~~i~~-t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 132 (509)
|.-+-|-++.-.....-.-.+.+...++ .+++.-+|.+++-+-.. |- +-.+++|+..=......++.+|++++.+|
T Consensus 39 gSvKDR~A~~mI~~Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~-Gy--~~iivmP~~~S~er~~~l~a~GAevi~t~ 115 (300)
T COG0031 39 GSVKDRIALYMIEDAEKRGLLKPGGTIVEATSGNTGIALAMVAAAK-GY--RLIIVMPETMSQERRKLLRALGAEVILTP 115 (300)
T ss_pred CchhHHHHHHHHHHHHHcCCCCCCCEEEEcCCChHHHHHHHHHHHc-CC--cEEEEeCCCCCHHHHHHHHHcCCEEEEcC
Confidence 3344444444333322222356665555 34444577666555443 32 11333444344456788999999999988
Q ss_pred cC
Q psy13922 133 LD 134 (509)
Q Consensus 133 ~~ 134 (509)
..
T Consensus 116 ~~ 117 (300)
T COG0031 116 GA 117 (300)
T ss_pred CC
Confidence 73
No 420
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=57.81 E-value=1.6e+02 Score=27.41 Aligned_cols=80 Identities=11% Similarity=-0.029 Sum_probs=45.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+++.|.+.|. .|++...............+.++..++.|- .|.+.+++.+++..+.
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGA----IVGLHGTRVEKLEALAAELGERVKIFPANL-----SDRDEVKALGQKAEAD 77 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 4577776665555567777887776 776665544434444444454555454442 2567777766553222
Q ss_pred -CCceEEEEe
Q psy13922 157 -CNPRAIVII 165 (509)
Q Consensus 157 -~~~~~ivi~ 165 (509)
.++.++|-+
T Consensus 78 ~~~id~vi~~ 87 (245)
T PRK12936 78 LEGVDILVNN 87 (245)
T ss_pred cCCCCEEEEC
Confidence 246666644
No 421
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=57.74 E-value=1.6e+02 Score=27.98 Aligned_cols=80 Identities=6% Similarity=-0.075 Sum_probs=47.3
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCh-hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYP-LYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
...+++|.|++..-..+.+.|.+.|. .|++....-. .....++..+.++..+..|- -|.+.+++.++...
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~----~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~ 78 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGA----DIVGVGVAEAPETQAQVEALGRKFHFITADL-----IQQKDIDSIVSQAV 78 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC----EEEEecCchHHHHHHHHHHcCCeEEEEEeCC-----CCHHHHHHHHHHHH
Confidence 34577787777777777788888887 7776543211 12223344566666666553 26777777776533
Q ss_pred cc-CCceEEEE
Q psy13922 155 KH-CNPRAIVI 164 (509)
Q Consensus 155 ~~-~~~~~ivi 164 (509)
+. .++..+|-
T Consensus 79 ~~~g~iD~lv~ 89 (251)
T PRK12481 79 EVMGHIDILIN 89 (251)
T ss_pred HHcCCCCEEEE
Confidence 22 34666553
No 422
>PRK06483 dihydromonapterin reductase; Provisional
Probab=56.51 E-value=1.7e+02 Score=27.26 Aligned_cols=76 Identities=14% Similarity=0.078 Sum_probs=42.9
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH- 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~- 156 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-......++..|...+. .|- .|.+.+++.++...+.
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~--~D~-----~~~~~~~~~~~~~~~~~ 72 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQ----PVIVSYRTHYPAIDGLRQAGAQCIQ--ADF-----STNAGIMAFIDELKQHT 72 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCC----eEEEEeCCchhHHHHHHHcCCEEEE--cCC-----CCHHHHHHHHHHHHhhC
Confidence 577777776666667777777776 7776654333333444445654443 332 2566776666654322
Q ss_pred CCceEEEE
Q psy13922 157 CNPRAIVI 164 (509)
Q Consensus 157 ~~~~~ivi 164 (509)
.++.+++-
T Consensus 73 ~~id~lv~ 80 (236)
T PRK06483 73 DGLRAIIH 80 (236)
T ss_pred CCccEEEE
Confidence 23555553
No 423
>PRK07063 short chain dehydrogenase; Provisional
Probab=55.69 E-value=1.9e+02 Score=27.47 Aligned_cols=101 Identities=10% Similarity=0.030 Sum_probs=52.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh-----cCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE-----FNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
...+++|.|+...-..+.+.|.+.|. .|++..-.-.......+. .+.++..+..|-. |.+.+++.+
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~----~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~ 77 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGA----AVALADLDAALAERAAAAIARDVAGARVLAVPADVT-----DAASVAAAV 77 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCC-----CHHHHHHHH
Confidence 34677777776666667777888876 777655433333322222 3455556655533 566676666
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .+..+++-+....+.+ ...+.+++++..+
T Consensus 78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 115 (260)
T PRK07063 78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFA 115 (260)
T ss_pred HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 543222 2456655432211111 2344555555443
No 424
>PRK06500 short chain dehydrogenase; Provisional
Probab=55.25 E-value=1.8e+02 Score=27.19 Aligned_cols=80 Identities=13% Similarity=0.073 Sum_probs=45.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.++...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..+-. |.+.+.+.++...+.
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 77 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGA----RVAITGRDPASLEAARAELGESALVIRADAG-----DVAAQKALAQALAEA 77 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC----EEEEecCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 3577777766666667777877776 7776654433334444455666666655432 555555555432221
Q ss_pred -CCceEEEEe
Q psy13922 157 -CNPRAIVII 165 (509)
Q Consensus 157 -~~~~~ivi~ 165 (509)
.++.++|-+
T Consensus 78 ~~~id~vi~~ 87 (249)
T PRK06500 78 FGRLDAVFIN 87 (249)
T ss_pred hCCCCEEEEC
Confidence 245666543
No 425
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=55.05 E-value=2e+02 Score=27.77 Aligned_cols=99 Identities=18% Similarity=0.132 Sum_probs=61.2
Q ss_pred cEEEeCCHHHHH-HHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcC-CEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 78 DVILSAGASDGI-KSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFN-MEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 78 ~i~~t~G~~~al-~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
.|++.+|++++| ..+.+.|.+.|- +|+...-.-.-....+...+ .++..+.+| -.|.+.++.++....+
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~----~vvl~aRR~drL~~la~~~~~~~~~~~~~D-----VtD~~~~~~~i~~~~~ 77 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA----KVVLAARREERLEALADEIGAGAALALALD-----VTDRAAVEAAIEALPE 77 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCC----eEEEEeccHHHHHHHHHhhccCceEEEeec-----cCCHHHHHHHHHHHHH
Confidence 456666666665 455677888887 88888877777778888887 455555555 3377777777765433
Q ss_pred c-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 156 H-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 156 ~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
. .++.+++-+.-.-+.+. -...++|+..++
T Consensus 78 ~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid 110 (246)
T COG4221 78 EFGRIDILVNNAGLALGDPLDEADLDDWDRMID 110 (246)
T ss_pred hhCcccEEEecCCCCcCChhhhCCHHHHHHHHH
Confidence 3 35666653333333321 334466666665
No 426
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=55.00 E-value=89 Score=27.87 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=50.9
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCC
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCN 158 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~ 158 (509)
|+++.++-..=..+++.|.+.+- .|....-.-..... ..+++++.... .|++.+.+++..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~----~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~~------ 60 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH----EVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALKG------ 60 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS----EEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHTT------
T ss_pred eEEECCCChHHHHHHHHHHHCCC----EEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhhh------
Confidence 45555433344456666766665 66655444333333 45666554332 378888888885
Q ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC
Q psy13922 159 PRAIVIINPGNPTGQVLTKENIQDIIKFAHREK 191 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~ 191 (509)
..+|+.+.+.++. ..+..+.+++.|++.+
T Consensus 61 ~d~vi~~~~~~~~----~~~~~~~~~~a~~~~~ 89 (183)
T PF13460_consen 61 ADAVIHAAGPPPK----DVDAAKNIIEAAKKAG 89 (183)
T ss_dssp SSEEEECCHSTTT----HHHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhcc----cccccccccccccccc
Confidence 6666655433333 2555677777777654
No 427
>PRK08339 short chain dehydrogenase; Provisional
Probab=54.99 E-value=2e+02 Score=27.57 Aligned_cols=99 Identities=16% Similarity=0.190 Sum_probs=51.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh----cCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE----FNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+. .+.++..+..|-. |.+.+++.++.
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~i~~~~~~ 79 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGA----DVILLSRNEENLKKAREKIKSESNVDVSYIVADLT-----KREDLERTVKE 79 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC-----CHHHHHHHHHH
Confidence 3567776666566667777888887 777765443333322222 2445555555432 56666666654
Q ss_pred hhccCCceEEEEeCCCCCC-C--CCCCHHHHHHHHH
Q psy13922 153 ARKHCNPRAIVIINPGNPT-G--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~~~~~~ivi~~p~NPt-G--~~~s~~~l~~l~~ 185 (509)
..+..++..++. +..-+. + ..++.+++++..+
T Consensus 80 ~~~~g~iD~lv~-nag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T PRK08339 80 LKNIGEPDIFFF-STGGPKPGYFMEMSMEDWEGAVK 114 (263)
T ss_pred HHhhCCCcEEEE-CCCCCCCCCcccCCHHHHHHHHH
Confidence 321124555553 332111 1 1345566666544
No 428
>PRK06194 hypothetical protein; Provisional
Probab=54.63 E-value=2.1e+02 Score=27.65 Aligned_cols=80 Identities=10% Similarity=-0.022 Sum_probs=45.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH---HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---AEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|+...=..+.+.|.+.|. .|++.+-.-....... ...+.++..+..|- -|.+.+++.++..
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~~~ 77 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGM----KLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALADAA 77 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHH
Confidence 4578877776555566777777776 7776654322222222 22366666666553 2677777776653
Q ss_pred hcc-CCceEEEEe
Q psy13922 154 RKH-CNPRAIVII 165 (509)
Q Consensus 154 ~~~-~~~~~ivi~ 165 (509)
.+. .++.+++-+
T Consensus 78 ~~~~g~id~vi~~ 90 (287)
T PRK06194 78 LERFGAVHLLFNN 90 (287)
T ss_pred HHHcCCCCEEEEC
Confidence 221 245665543
No 429
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=52.73 E-value=2e+02 Score=27.36 Aligned_cols=102 Identities=18% Similarity=0.198 Sum_probs=64.0
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC------Ch-----hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHH
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ------YP-----LYSASLAEFNMEQIGYYLDESKQWGLPISELE 147 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~------y~-----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~ 147 (509)
++..+||-.+...+.++..+ .+ -..+++..|. |+ -....++..|..++.+..... +.--.+.|.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~--V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~ 78 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HE--VISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLA 78 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-Ce--eEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHH
Confidence 45668888888777777665 43 0012222221 22 234567788999887765432 111245555
Q ss_pred HHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 148 RSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 148 ~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
+.+.+. .+.+|+ +|.+.+......+-++|.+.|+-.+.
T Consensus 79 ~~l~~~----gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~~ 116 (222)
T TIGR00289 79 GQLGEL----DVEALC-------IGAIESNYQKSRIDKVCRELGLKSIA 116 (222)
T ss_pred HHHHHc----CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEec
Confidence 555443 566666 78999999999999999999887654
No 430
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=52.72 E-value=89 Score=30.62 Aligned_cols=107 Identities=17% Similarity=0.102 Sum_probs=61.4
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc--CCCChh--HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP--IPQYPL--YSASLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~--~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
+....+++|-|-+..+..++....+.|. +-+|++. .|.+.+ ....+...|.++..++. ..+-..
T Consensus 105 I~~~~~ILT~~~S~~v~~~l~~a~~~~~--~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d----------~~~~~~ 172 (282)
T PF01008_consen 105 INDGDTILTHGYSSTVERFLLSAKKKGK--KFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPD----------SAVGYV 172 (282)
T ss_dssp C-TTEEEEEES--SHHHHHHHHHHHTTE--EEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-G----------GGHHHH
T ss_pred ccCCeEEEEeCCchHHHHHHHHHHHcCC--eEEEEEccCCcchhhhhHHHHhhhcceeEEEEec----------hHHHHH
Confidence 5567899998888888877777665542 2246554 466665 23445566888887652 333334
Q ss_pred HHhhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 150 ITEARKHCNPRAIVI-INPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 150 i~~~~~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
+.+ ++..+++ ..---+.|.++.+---..++-.|+.+++++++=
T Consensus 173 m~~-----~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 173 MPR-----DVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp HHC-----TESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred HHH-----hCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 443 1666665 333444565555555667777889999888864
No 431
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=51.50 E-value=2.3e+02 Score=28.84 Aligned_cols=144 Identities=9% Similarity=0.051 Sum_probs=76.0
Q ss_pred HHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEE
Q psy13922 29 DVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVL 108 (509)
Q Consensus 29 ~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vl 108 (509)
.|..+++..... .... | ..+..+|.+.+.++-. . +.+ ..+.|+..+||-.+..++......-|. +..++
T Consensus 22 GvC~~C~~~~~~---~~~~-~--~~~~~~l~~l~~~~k~-~-~~~-~yD~iV~lSGGkDSs~la~ll~~~~gl--~~l~v 90 (343)
T TIGR03573 22 GVCSACRNFEEK---SKID-W--DEREKELEELVDKIKK-K-GGG-RYDCIIGVSGGKDSTYQAHVLKKKLGL--NPLLV 90 (343)
T ss_pred CCchhhhhHHhh---cCCC-H--HHHHHHHHHHHHHHHh-c-CCC-CCCEEEECCCCHHHHHHHHHHHHHhCC--ceEEE
Confidence 567777666544 1121 3 2333455555554432 1 111 156677789998887665333222233 11224
Q ss_pred EcCCCCh------hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 109 IPIPQYP------LYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 109 v~~p~y~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
..++.|. .....++.+|.....+.. |.+.+....... .+ +..+|...+. ......
T Consensus 91 t~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~~~-----~~-----~~~~pc~~c~-~~~~~~ 151 (343)
T TIGR03573 91 TVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQRAY-----FK-----KVGDPEWPQD-HAIFAS 151 (343)
T ss_pred EECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHHHH-----Hh-----ccCCCchhhh-hHHHHH
Confidence 5566554 234455668988877654 344454444331 11 2334433222 234577
Q ss_pred HHHHHHHCCcEEEEcccCCc
Q psy13922 183 IIKFAHREKLFLFADEVYQD 202 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~ 202 (509)
+.++|+++|+.+|+.--..+
T Consensus 152 l~~~A~~~gi~~Il~G~~~d 171 (343)
T TIGR03573 152 VYQVALKFNIPLIIWGENIA 171 (343)
T ss_pred HHHHHHHhCCCEEEeCCCHH
Confidence 88899999999998744433
No 432
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=50.15 E-value=1.4e+02 Score=28.24 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=57.3
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEE-E-cC---C---CCh-----hHHHHHHhcCCEEEEEecCCCCCCCCCHHH
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVL-I-PI---P---QYP-----LYSASLAEFNMEQIGYYLDESKQWGLPISE 145 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vl-v-~~---p---~y~-----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 145 (509)
++..+||-.+...+.+++.+ .+ .+. + .. . .|+ -....++..|.+++.++...+. .--.+.
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~----v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~--~~~~~~ 76 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HE----VVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDE--EDYVED 76 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--E----EEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---C--CCHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CC----ccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCcc--chhhHH
Confidence 56678888888888887766 42 211 1 11 1 122 2356678889999998876321 112567
Q ss_pred HHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 146 LERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 146 L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
|.+.+++. ++.+++ +|.+.+......+-++|.+.|+-.+.
T Consensus 77 l~~~l~~~----~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~~ 116 (218)
T PF01902_consen 77 LKEALKEL----KVEAVV-------FGDIDSEYQRNWVERVCERLGLEAVF 116 (218)
T ss_dssp HHHHHCTC------SEEE---------TTS-HHHHHHHHHHHHHCT-EEE-
T ss_pred HHHHHHHc----CCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEEe
Confidence 77777654 566666 78889989999999999999988665
No 433
>PLN02591 tryptophan synthase
Probab=49.75 E-value=2.5e+02 Score=27.18 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=59.8
Q ss_pred HHHHHHHHhhcCCCCCCCeEEEcCCCChh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEE
Q psy13922 88 GIKSVLKLLIEDVDGKKPGVLIPIPQYPL---YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVI 164 (509)
Q Consensus 88 al~~~~~~l~~~gd~~~~~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi 164 (509)
++..++..+.+.|- +.||+++--+.. +...++..|...+.+-.. ..+.+.++...+. ....||+
T Consensus 94 G~~~F~~~~~~aGv---~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~P-----tt~~~ri~~ia~~-----~~gFIY~ 160 (250)
T PLN02591 94 GIDKFMATIKEAGV---HGLVVPDLPLEETEALRAEAAKNGIELVLLTTP-----TTPTERMKAIAEA-----SEGFVYL 160 (250)
T ss_pred HHHHHHHHHHHcCC---CEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC-----CCCHHHHHHHHHh-----CCCcEEE
Confidence 55566666666652 378888765553 455567778887776432 2234556655555 5677777
Q ss_pred eCCCCCCCCCCC-HHHHHHHHHHHHHC-CcEEEE
Q psy13922 165 INPGNPTGQVLT-KENIQDIIKFAHRE-KLFLFA 196 (509)
Q Consensus 165 ~~p~NPtG~~~s-~~~l~~l~~ia~~~-~i~lI~ 196 (509)
..-...||..-. +++++++++.++++ ++.+++
T Consensus 161 Vs~~GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 161 VSSTGVTGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred eeCCCCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 666777886322 46677877777764 666665
No 434
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=49.63 E-value=61 Score=29.40 Aligned_cols=79 Identities=9% Similarity=0.019 Sum_probs=43.5
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC----C--hhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ----Y--PLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~----y--~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
+++|.|....-..+.+.|...+. .+|++.... . ......++..|.++..+..|-. |.+++++.+..
T Consensus 3 ylitGG~gglg~~la~~La~~~~---~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~-----d~~~v~~~~~~ 74 (181)
T PF08659_consen 3 YLITGGLGGLGQSLARWLAERGA---RRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVT-----DPEAVAAALAQ 74 (181)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT----SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TT-----SHHHHHHHHHT
T ss_pred EEEECCccHHHHHHHHHHHHcCC---CEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCcc-----CHHHHHHHHHH
Confidence 45555554444455555655542 255554433 1 1245556777999998887743 78999999887
Q ss_pred hhcc-CCceEEEEe
Q psy13922 153 ARKH-CNPRAIVII 165 (509)
Q Consensus 153 ~~~~-~~~~~ivi~ 165 (509)
.... +++..|+-.
T Consensus 75 ~~~~~~~i~gVih~ 88 (181)
T PF08659_consen 75 LRQRFGPIDGVIHA 88 (181)
T ss_dssp SHTTSS-EEEEEE-
T ss_pred HHhccCCcceeeee
Confidence 5433 355666643
No 435
>PRK08589 short chain dehydrogenase; Validated
Probab=49.54 E-value=2.5e+02 Score=27.02 Aligned_cols=79 Identities=10% Similarity=0.019 Sum_probs=45.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH---HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---AEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-. ....... +..+.++..+..|-. |.+.++++++..
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~----~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~ 76 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGA----YVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDIS-----DEQQVKDFASEI 76 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecC-----CHHHHHHHHHHH
Confidence 4577777766666666777887777 78776655 4333333 233555666655532 566666666553
Q ss_pred hcc-CCceEEEEe
Q psy13922 154 RKH-CNPRAIVII 165 (509)
Q Consensus 154 ~~~-~~~~~ivi~ 165 (509)
.+. .++.++|-+
T Consensus 77 ~~~~g~id~li~~ 89 (272)
T PRK08589 77 KEQFGRVDVLFNN 89 (272)
T ss_pred HHHcCCcCEEEEC
Confidence 322 245655543
No 436
>PRK06139 short chain dehydrogenase; Provisional
Probab=48.82 E-value=2.4e+02 Score=28.30 Aligned_cols=102 Identities=10% Similarity=0.022 Sum_probs=54.5
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.++...=..+.+.|.+.|. .|++..-.-.... ..++..|.++..++.|-. |.+.+++.++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~----~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~ 76 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA----RLVLAARDEEALQAVAEECRALGAEVLVVPTDVT-----DADQVKALAT 76 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHH
Confidence 334677776665555566677777777 7777654333222 223445777766665532 6777777766
Q ss_pred hhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
...+. .++..+|-+......|. ..+.++++++.+
T Consensus 77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~ 113 (330)
T PRK06139 77 QAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQ 113 (330)
T ss_pred HHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 53222 24666554322222222 234455554444
No 437
>KOG1200|consensus
Probab=48.65 E-value=2.3e+02 Score=26.50 Aligned_cols=100 Identities=15% Similarity=0.193 Sum_probs=57.7
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCC--EEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNM--EQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~--~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
-.++|.|++.--..+.+.|.+.|. +|++.+-.-......+..++. .-..+..|-+ +.+.....+++..+
T Consensus 16 ~~~vtGg~sGIGrAia~~la~~Ga----rv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS-----~a~~v~~~l~e~~k 86 (256)
T KOG1200|consen 16 VAAVTGGSSGIGRAIAQLLAKKGA----RVAVADLDSAAAEATAGDLGGYGDHSAFSCDVS-----KAHDVQNTLEEMEK 86 (256)
T ss_pred eeEEecCCchHHHHHHHHHHhcCc----EEEEeecchhhHHHHHhhcCCCCccceeeeccC-----cHHHHHHHHHHHHH
Confidence 356666666666677777888887 999988776666666766654 2222222211 22333333333332
Q ss_pred c-CCceEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q psy13922 156 H-CNPRAIVIINPGNPTGQ--VLTKENIQDIIKF 186 (509)
Q Consensus 156 ~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~i 186 (509)
. ..+..++=+.--+-.+. .++.++|++.+..
T Consensus 87 ~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~v 120 (256)
T KOG1200|consen 87 SLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAV 120 (256)
T ss_pred hcCCCcEEEEcCccccccceeeccHHHHHHHHHh
Confidence 2 24444443444555554 6788899988764
No 438
>PRK05867 short chain dehydrogenase; Provisional
Probab=48.51 E-value=2.4e+02 Score=26.61 Aligned_cols=81 Identities=9% Similarity=-0.005 Sum_probs=46.6
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. +|++..-.-...... ++..+.++..+..|- -|.+.+++.++.
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~ 79 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGA----QVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-----SQHQQVTSMLDQ 79 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHHHHH
Confidence 34677777766666667777777776 777765443333222 233355666665553 266777776665
Q ss_pred hhcc-CCceEEEEe
Q psy13922 153 ARKH-CNPRAIVII 165 (509)
Q Consensus 153 ~~~~-~~~~~ivi~ 165 (509)
..+. .++.++|.+
T Consensus 80 ~~~~~g~id~lv~~ 93 (253)
T PRK05867 80 VTAELGGIDIAVCN 93 (253)
T ss_pred HHHHhCCCCEEEEC
Confidence 3222 256666543
No 439
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=48.32 E-value=2.5e+02 Score=27.31 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=32.5
Q ss_pred CHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 142 PISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 142 d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
+.+.+.+.++...+.....+++-++|.. ||..++.+.+.+|++ ..|+.-|=|..
T Consensus 107 ~~~~~~~~~~~ia~~~~~pi~iYn~P~~-tg~~l~~~~~~~L~~---~~~v~giK~s~ 160 (281)
T cd00408 107 SQEGIVAHFKAVADASDLPVILYNIPGR-TGVDLSPETIARLAE---HPNIVGIKDSS 160 (281)
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEECccc-cCCCCCHHHHHHHhc---CCCEEEEEeCC
Confidence 3455555544433322455555566655 799999887777765 45777666644
No 440
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=48.19 E-value=66 Score=27.48 Aligned_cols=58 Identities=9% Similarity=0.112 Sum_probs=44.3
Q ss_pred CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEE--e---CCCCCCCCCCCHHHHHHHHHHHHHCC
Q psy13922 125 NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVI--I---NPGNPTGQVLTKENIQDIIKFAHREK 191 (509)
Q Consensus 125 g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi--~---~p~NPtG~~~s~~~l~~l~~ia~~~~ 191 (509)
+.+++.+|... .+|+..+.+++.+ ..+.|++ + ++|...|.....+.++.+-++..+.|
T Consensus 28 ~vriIrvpC~G----rv~~~~il~Af~~-----GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 28 NVRIIRVPCSG----RVDPEFILRAFEK-----GADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred CeEEEEccCCC----ccCHHHHHHHHHc-----CCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 46777777652 7899999999998 6888777 3 34668888888888888777777654
No 441
>PRK04296 thymidine kinase; Provisional
Probab=48.12 E-value=1.2e+02 Score=27.75 Aligned_cols=99 Identities=12% Similarity=0.087 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCeEEEcCCCChh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEE
Q psy13922 86 SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL---YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAI 162 (509)
Q Consensus 86 ~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~i 162 (509)
+.++..+.+. ...+. .|++..|.+.. ....+...|.++..+.. ...+.+.+.+.. ...++.+|
T Consensus 17 T~~l~~~~~~-~~~g~----~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~--~~~~~dvv 82 (190)
T PRK04296 17 TELLQRAYNY-EERGM----KVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEE--EGEKIDCV 82 (190)
T ss_pred HHHHHHHHHH-HHcCC----eEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHh--hCCCCCEE
Confidence 4555444444 34454 77776664332 23334445544333221 123334333332 11257788
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcc
Q psy13922 163 VIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDN 203 (509)
Q Consensus 163 vi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~ 203 (509)
+|... ..++.+++.++++.++..++.+|+=.--.+|
T Consensus 83 iIDEa-----q~l~~~~v~~l~~~l~~~g~~vi~tgl~~~~ 118 (190)
T PRK04296 83 LIDEA-----QFLDKEQVVQLAEVLDDLGIPVICYGLDTDF 118 (190)
T ss_pred EEEcc-----ccCCHHHHHHHHHHHHHcCCeEEEEecCccc
Confidence 88644 3567777899999988999888875444443
No 442
>PRK07478 short chain dehydrogenase; Provisional
Probab=48.08 E-value=2.4e+02 Score=26.55 Aligned_cols=80 Identities=10% Similarity=-0.019 Sum_probs=45.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..+.++..++.|-. |.+.+++.+++.
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~ 77 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGA----KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVR-----DEAYAKALVALA 77 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHH
Confidence 4577776665555566677777776 777665332333222 2334556666665533 677777777654
Q ss_pred hcc-CCceEEEEe
Q psy13922 154 RKH-CNPRAIVII 165 (509)
Q Consensus 154 ~~~-~~~~~ivi~ 165 (509)
.+. .++..++.+
T Consensus 78 ~~~~~~id~li~~ 90 (254)
T PRK07478 78 VERFGGLDIAFNN 90 (254)
T ss_pred HHhcCCCCEEEEC
Confidence 322 356666543
No 443
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=47.91 E-value=21 Score=36.14 Aligned_cols=69 Identities=13% Similarity=0.287 Sum_probs=45.2
Q ss_pred HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 118 SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 118 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
...+...+.+...+.+.++..|.+.+..+.++-...... ... + |..|+++++++|++.|+++||-||-.
T Consensus 24 id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~~-~~~---------~-~~~yT~~di~~lv~yA~~~gI~VIPe 92 (351)
T PF00728_consen 24 IDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGAYR-PSD---------A-GGYYTKEDIRELVAYAKERGIEVIPE 92 (351)
T ss_dssp HHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTTES-TTC---------T-ESEBEHHHHHHHHHHHHHTT-EEEEE
T ss_pred HHHHHHcCCcEEEEEEecCCCCccccCCCccccccCccc-ccc---------c-cccCCHHHHHHHHHHHHHcCCceeee
Confidence 344556788899998877767777665555443331100 011 3 44999999999999999999998864
No 444
>PRK05876 short chain dehydrogenase; Provisional
Probab=47.76 E-value=2.7e+02 Score=26.93 Aligned_cols=78 Identities=14% Similarity=0.065 Sum_probs=45.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|++..=..+.+.|...|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++..
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~----~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 77 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGA----RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR-----HREEVTHLADEA 77 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHHHHHH
Confidence 4577887776666667777877776 777655333333222 2334666666666533 677777777653
Q ss_pred hcc-CCceEEE
Q psy13922 154 RKH-CNPRAIV 163 (509)
Q Consensus 154 ~~~-~~~~~iv 163 (509)
.+. .++.++|
T Consensus 78 ~~~~g~id~li 88 (275)
T PRK05876 78 FRLLGHVDVVF 88 (275)
T ss_pred HHHcCCCCEEE
Confidence 322 2456555
No 445
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=47.43 E-value=2e+02 Score=27.37 Aligned_cols=77 Identities=18% Similarity=0.090 Sum_probs=40.0
Q ss_pred chHHHHHHHHHHHhhhc-CCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEe
Q psy13922 54 GIEIIRRHVAQYISRRD-GQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYY 132 (509)
Q Consensus 54 g~~~lr~~va~~l~~~~-g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 132 (509)
|..+.|.+......... |. .+...|+..+++..+..++..+- ..|- +-.|+++...-......++..|++++.++
T Consensus 28 gS~K~R~a~~~l~~a~~~g~-~~~~~vv~~ssGN~g~alA~~a~-~~g~--~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~ 103 (244)
T cd00640 28 GSFKDRGALNLILLAEEEGK-LPKGVIIESTGGNTGIALAAAAA-RLGL--KCTIVMPEGASPEKVAQMRALGAEVVLVP 103 (244)
T ss_pred CCcHHHHHHHHHHHHHHcCC-CCCCEEEEeCCcHHHHHHHHHHH-HcCC--CEEEEECCCCCHHHHHHHHHCCCEEEEEC
Confidence 44555655543332221 21 11234555555555554444332 2332 22556665555556777889999999886
Q ss_pred cC
Q psy13922 133 LD 134 (509)
Q Consensus 133 ~~ 134 (509)
.+
T Consensus 104 ~~ 105 (244)
T cd00640 104 GD 105 (244)
T ss_pred CC
Confidence 43
No 446
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=47.08 E-value=2.4e+02 Score=26.10 Aligned_cols=106 Identities=16% Similarity=0.214 Sum_probs=63.1
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC-----------hhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHH
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY-----------PLYSASLAEFNMEQIGYYLDESKQWGLPISELE 147 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y-----------~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~ 147 (509)
++..+||..+..++..+.. .|. +--.+++..|.. ......++..|+++..++++.+. .--.+.+.
T Consensus 3 ~v~~SGGkDS~~al~~a~~-~G~-~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~--e~~~~~l~ 78 (194)
T cd01994 3 VALISGGKDSCYALYRALE-EGH-EVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEE--EDEVEDLK 78 (194)
T ss_pred EEEecCCHHHHHHHHHHHH-cCC-EEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCc--hHHHHHHH
Confidence 4566888888866665554 343 000122222211 12245567789998888764321 00135555
Q ss_pred HHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 148 RSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 148 ~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
+.+.+..+. ...+|+ +|...+......+-++|.+.|+..+.
T Consensus 79 ~~l~~~~~~-g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~~~ 119 (194)
T cd01994 79 ELLRKLKEE-GVDAVV-------FGAILSEYQRTRVERVCERLGLEPLA 119 (194)
T ss_pred HHHHHHHHc-CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEEe
Confidence 555554222 355555 68889999999999999999988665
No 447
>KOG0369|consensus
Probab=47.02 E-value=49 Score=36.27 Aligned_cols=105 Identities=14% Similarity=0.193 Sum_probs=64.2
Q ss_pred EEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh----HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 80 ILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL----YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
+-.-|+.-+|.-++....+.+- ..+.|...|-+ +...++.+|.+.+ +++++.+...-++.
T Consensus 86 l~PV~AYL~ideii~iak~~~v----davHPGYGFLSErsdFA~av~~AGi~fi----------GPspeVi~~mGDKv-- 149 (1176)
T KOG0369|consen 86 LPPVGAYLAIDEIISIAKKHNV----DAVHPGYGFLSERSDFAQAVQDAGIRFI----------GPSPEVIDSMGDKV-- 149 (1176)
T ss_pred CCchhhhhhHHHHHHHHHHcCC----CeecCCccccccchHHHHHHHhcCceEe----------CCCHHHHHHhhhHH--
Confidence 3345667778888877766643 34445444432 4455666777665 44555555444332
Q ss_pred cCCceEEEE--eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcc
Q psy13922 156 HCNPRAIVI--INPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDN 203 (509)
Q Consensus 156 ~~~~~~ivi--~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~ 203 (509)
..+.+-+ .-|-- .|+.-|.+..++-.++|++||..+|+-.+|++.
T Consensus 150 --~AR~~Ai~agVpvV-PGTpgPitt~~EA~eF~k~yG~PvI~KAAyGGG 196 (1176)
T KOG0369|consen 150 --AARAIAIEAGVPVV-PGTPGPITTVEEALEFVKEYGLPVIIKAAYGGG 196 (1176)
T ss_pred --HHHHHHHHcCCCcc-CCCCCCcccHHHHHHHHHhcCCcEEEeecccCC
Confidence 1222222 22222 255555667899999999999999999999874
No 448
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=46.81 E-value=1.9e+02 Score=28.69 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=29.6
Q ss_pred HHHHHHHHHhhhccC-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 143 ISELERSITEARKHC-NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 143 ~~~L~~~i~~~~~~~-~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.+.+.+.++...+.. ...+++-++|.. ||..++.+.+.+|++ +-.|+.-|=|.
T Consensus 111 ~~~l~~~f~~ia~a~~~lpv~iYn~P~~-tg~~l~~~~l~~L~~--~~pnv~giK~s 164 (294)
T TIGR02313 111 QEALYDHFAEVADAVPDFPIIIYNIPGR-AAQEIAPKTMARLRK--DCPNIVGAKES 164 (294)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEeCchh-cCcCCCHHHHHHHHh--hCCCEEEEEeC
Confidence 344444444332222 345555566655 799999777666654 12566666663
No 449
>PRK07109 short chain dehydrogenase; Provisional
Probab=46.64 E-value=2.9e+02 Score=27.75 Aligned_cols=80 Identities=10% Similarity=0.035 Sum_probs=46.5
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.... ..++..|.++..+..|-. |.+.+++.++.
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~----~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~-----d~~~v~~~~~~ 78 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGA----KVVLLARGEEGLEALAAEIRAAGGEALAVVADVA-----DAEAVQAAADR 78 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCC-----CHHHHHHHHHH
Confidence 34577776666555566677777776 7776654433222 223445777777766533 67777777665
Q ss_pred hhcc-CCceEEEE
Q psy13922 153 ARKH-CNPRAIVI 164 (509)
Q Consensus 153 ~~~~-~~~~~ivi 164 (509)
..+. .++..+|-
T Consensus 79 ~~~~~g~iD~lIn 91 (334)
T PRK07109 79 AEEELGPIDTWVN 91 (334)
T ss_pred HHHHCCCCCEEEE
Confidence 3222 24565553
No 450
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=46.30 E-value=47 Score=35.19 Aligned_cols=81 Identities=15% Similarity=0.368 Sum_probs=51.9
Q ss_pred HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-C---CceEEE--E-eCC--CCCCCCCCCHHHHHHHHHHH
Q psy13922 117 YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-C---NPRAIV--I-INP--GNPTGQVLTKENIQDIIKFA 187 (509)
Q Consensus 117 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~---~~~~iv--i-~~p--~NPtG~~~s~~~l~~l~~ia 187 (509)
+.+.+...+.++..+.+.++.+|.+.+..+.++-+..... . ....++ . ..+ ..+.+-.|+++++++|++.|
T Consensus 27 ~Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA 106 (445)
T cd06569 27 LLDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYA 106 (445)
T ss_pred HHHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHH
Confidence 3455566789999999988878988877665543321000 0 001111 0 111 12345689999999999999
Q ss_pred HHCCcEEEEc
Q psy13922 188 HREKLFLFAD 197 (509)
Q Consensus 188 ~~~~i~lI~D 197 (509)
+++||-||--
T Consensus 107 ~~rgI~VIPE 116 (445)
T cd06569 107 KARHIEVIPE 116 (445)
T ss_pred HHcCCEEEEc
Confidence 9999998863
No 451
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=46.18 E-value=3.2e+02 Score=27.30 Aligned_cols=105 Identities=14% Similarity=0.120 Sum_probs=67.5
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc--CCCChhHH--HHHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP--IPQYPLYS--ASLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~--~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
....++++|.|-+.+...++....+.+. +=.|++. -|.+.+.. ..++..|.++..++ | .+....
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k--~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~---------D-sa~~~~ 184 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGK--RFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV---------D-SAVGAF 184 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCC--ceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe---------c-hHHHHH
Confidence 3456899999998888888888877652 2245554 37777654 45677787777664 1 233334
Q ss_pred HHhhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 150 ITEARKHCNPRAIVI-INPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 150 i~~~~~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
+++ +..+++ ...---.|.++++-----|+-.|++.+.++++
T Consensus 185 ~~~------vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 185 MSR------VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred HHh------CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 443 555555 23333345666665566778888888887765
No 452
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=45.68 E-value=2.7e+02 Score=26.32 Aligned_cols=80 Identities=15% Similarity=0.071 Sum_probs=47.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. +|++...............+.++..+..|- .|.+.+++++++..+.
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGA----RVVIADIKPARARLAALEIGPAAIAVSLDV-----TRQDSIDRIVAAAVER 77 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC----EEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 4577777766666677777777776 787776655444444444454555555542 3667777777653322
Q ss_pred -CCceEEEEe
Q psy13922 157 -CNPRAIVII 165 (509)
Q Consensus 157 -~~~~~ivi~ 165 (509)
.++.+++-+
T Consensus 78 ~~~id~li~~ 87 (257)
T PRK07067 78 FGGIDILFNN 87 (257)
T ss_pred cCCCCEEEEC
Confidence 246666543
No 453
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=45.57 E-value=2.7e+02 Score=26.26 Aligned_cols=102 Identities=20% Similarity=0.297 Sum_probs=58.3
Q ss_pred EEeCCHHHHHHHHHHHhhcCCCCCCCeE--E-EcCCC------Ch-----hHHHHHHhcCCEEEEEecCCCCCCCCCHHH
Q psy13922 80 ILSAGASDGIKSVLKLLIEDVDGKKPGV--L-IPIPQ------YP-----LYSASLAEFNMEQIGYYLDESKQWGLPISE 145 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~~~gd~~~~~V--l-v~~p~------y~-----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 145 (509)
+..+||-.+..++..+.. .|. .| + +..+. ++ .....++..|.+...++++... ....+.
T Consensus 2 vl~SGGkDS~~al~~a~~-~G~----~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~--~~~~~~ 74 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALE-EGH----EVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEK--EKEVED 74 (218)
T ss_pred eeecCcHHHHHHHHHHHH-cCC----EEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCC--hHHHHH
Confidence 456777777766655554 444 33 2 22221 11 2335567779988877765210 113445
Q ss_pred HHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 146 LERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 146 L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
|..++...... ....|+ +|...+......+-++|.+.|+.++.
T Consensus 75 l~~~l~~~~~~-g~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~~~~ 117 (218)
T TIGR03679 75 LKGALKELKRE-GVEGIV-------TGAIASRYQKSRIERICEELGLKVFA 117 (218)
T ss_pred HHHHHHHHHHc-CCCEEE-------ECCcccHhHHHHHHHHHHhCCCeEEe
Confidence 66666554322 466666 46666666677777888888877554
No 454
>PRK06128 oxidoreductase; Provisional
Probab=45.07 E-value=2.6e+02 Score=27.44 Aligned_cols=100 Identities=9% Similarity=-0.004 Sum_probs=55.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC-----hhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY-----PLYSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y-----~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
..+++|.|+...=..+.+.|.+.|. .|++....- ......++..|.++..+..|-. |.+.++++++
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G~----~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~ 126 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGA----DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLK-----DEAFCRQLVE 126 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcCC----EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCC-----CHHHHHHHHH
Confidence 4688887776666677777887776 776642211 1122334445767766666532 6777777776
Q ss_pred hhhcc-CCceEEEEeCCCC-CC--CCCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGN-PT--GQVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~N-Pt--G~~~s~~~l~~l~~ 185 (509)
+..+. .++.++|.+.... +. -..++.+++++..+
T Consensus 127 ~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~ 164 (300)
T PRK06128 127 RAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFK 164 (300)
T ss_pred HHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHH
Confidence 53221 2566666432211 11 12345566666555
No 455
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=44.95 E-value=93 Score=30.11 Aligned_cols=94 Identities=16% Similarity=0.227 Sum_probs=53.0
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCC-CHHHHHHHHHhhhcc
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGL-PISELERSITEARKH 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~~L~~~i~~~~~~ 156 (509)
+|++-+|++++-.+ ...|.+.| .|+++.-+ .|......-......+... ++ |.+.+++.+++.
T Consensus 2 ~ILvlgGTtE~r~l-a~~L~~~g-----~v~~sv~t--~~g~~~~~~~~~~~~v~~G-----~lg~~~~l~~~l~~~--- 65 (249)
T PF02571_consen 2 KILVLGGTTEGRKL-AERLAEAG-----YVIVSVAT--SYGGELLKPELPGLEVRVG-----RLGDEEGLAEFLREN--- 65 (249)
T ss_pred EEEEEechHHHHHH-HHHHHhcC-----CEEEEEEh--hhhHhhhccccCCceEEEC-----CCCCHHHHHHHHHhC---
Confidence 58899999999854 45555554 23333222 2222222111111122221 56 899999999875
Q ss_pred CCceEEE-EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEE
Q psy13922 157 CNPRAIV-IINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195 (509)
Q Consensus 157 ~~~~~iv-i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI 195 (509)
++++|| .++|- -..+ =+.+.+.|++.|+..+
T Consensus 66 -~i~~vIDATHPf---A~~i----s~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 66 -GIDAVIDATHPF---AAEI----SQNAIEACRELGIPYL 97 (249)
T ss_pred -CCcEEEECCCch---HHHH----HHHHHHHHhhcCcceE
Confidence 788877 35552 2222 2566677888887766
No 456
>PRK05717 oxidoreductase; Validated
Probab=44.90 E-value=2.8e+02 Score=26.24 Aligned_cols=80 Identities=11% Similarity=-0.016 Sum_probs=45.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+++.|.+.|. +|++............+..+.++..+..|- -|.+.+.+.+++..+.
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 81 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGW----QVVLADLDRERGSKVAKALGENAWFIAMDV-----ADEAQVAAGVAEVLGQ 81 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCC----EEEEEcCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 4577777766666667777777776 777765443333333444454555555542 2566666665543221
Q ss_pred -CCceEEEEe
Q psy13922 157 -CNPRAIVII 165 (509)
Q Consensus 157 -~~~~~ivi~ 165 (509)
.++..++-+
T Consensus 82 ~g~id~li~~ 91 (255)
T PRK05717 82 FGRLDALVCN 91 (255)
T ss_pred hCCCCEEEEC
Confidence 245666543
No 457
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=44.68 E-value=1.5e+02 Score=28.68 Aligned_cols=93 Identities=10% Similarity=0.041 Sum_probs=56.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCC-CHHHHHHHHHhhhc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGL-PISELERSITEARK 155 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~~L~~~i~~~~~ 155 (509)
..|++-+|++++-.++- .|.+.|. .|+++.-+-.+- ....+.++.. .++ |.+.+++.+.+.
T Consensus 3 ~~IlvlgGT~egr~la~-~L~~~g~----~v~~Svat~~g~---~~~~~~~v~~--------G~l~~~~~l~~~l~~~-- 64 (248)
T PRK08057 3 PRILLLGGTSEARALAR-ALAAAGV----DIVLSLAGRTGG---PADLPGPVRV--------GGFGGAEGLAAYLREE-- 64 (248)
T ss_pred ceEEEEechHHHHHHHH-HHHhCCC----eEEEEEccCCCC---cccCCceEEE--------CCCCCHHHHHHHHHHC--
Confidence 36899999999986554 5555555 666654432222 2222332221 156 889999999875
Q ss_pred cCCceEEE-EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 156 HCNPRAIV-IINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 156 ~~~~~~iv-i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
++++|+ .++|-- ..+ =+-+.+.|++.|+..+=
T Consensus 65 --~i~~VIDATHPfA---~~i----s~~a~~ac~~~~ipyiR 97 (248)
T PRK08057 65 --GIDLVIDATHPYA---AQI----SANAAAACRALGIPYLR 97 (248)
T ss_pred --CCCEEEECCCccH---HHH----HHHHHHHHHHhCCcEEE
Confidence 788877 355522 222 25566778888877663
No 458
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=44.56 E-value=3e+02 Score=26.63 Aligned_cols=74 Identities=16% Similarity=0.185 Sum_probs=42.9
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.+++.-+ .+...++.+|.++..+.. + +-.+++..|.+.++...+ .++++|+.. ++.+. ...+ .
T Consensus 172 ~~v~~H~---af~Y~~~~ygl~~~~~~~-~--~~eps~~~l~~l~~~ik~-~~v~~if~e-~~~~~------~~~~---~ 234 (266)
T cd01018 172 AFMVYHP---AWGYFARDYGLTQIPIEE-E--GKEPSPADLKRLIDLAKE-KGVRVVFVQ-PQFST------KSAE---A 234 (266)
T ss_pred eEEEECc---hhHHHHHHcCCEEEecCC-C--CCCCCHHHHHHHHHHHHH-cCCCEEEEc-CCCCc------HHHH---H
Confidence 5666554 456778899999886532 2 225655555554443221 178887765 32221 2233 5
Q ss_pred HHHHCCcEEEE
Q psy13922 186 FAHREKLFLFA 196 (509)
Q Consensus 186 ia~~~~i~lI~ 196 (509)
++++.|+.++.
T Consensus 235 la~~~g~~v~~ 245 (266)
T cd01018 235 IAREIGAKVVT 245 (266)
T ss_pred HHHHcCCeEEE
Confidence 66788887765
No 459
>smart00642 Aamy Alpha-amylase domain.
Probab=44.56 E-value=95 Score=27.94 Aligned_cols=28 Identities=21% Similarity=0.376 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHCCcEEEEcccCCcc
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEVYQDN 203 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Deay~~~ 203 (509)
+.++++++++-|+++|+-||.|-+.-+.
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 4589999999999999999999887653
No 460
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=44.52 E-value=46 Score=34.10 Aligned_cols=78 Identities=17% Similarity=0.365 Sum_probs=49.7
Q ss_pred HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCc-eEEEE---eCCCCCCCCCCCHHHHHHHHHHHHHCCcE
Q psy13922 118 SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNP-RAIVI---INPGNPTGQVLTKENIQDIIKFAHREKLF 193 (509)
Q Consensus 118 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~-~~ivi---~~p~NPtG~~~s~~~l~~l~~ia~~~~i~ 193 (509)
.+.+...+.+...+.+.++.+|.+.+..+.++-... .. +. ...-. ..-..+.|-.|+++++++|++.|+++||-
T Consensus 24 Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~g-a~-~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~ 101 (357)
T cd06563 24 IDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVG-AW-RGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGIT 101 (357)
T ss_pred HHHHHHhccceEEEeeecCCCceecccCcchhhhcc-cc-cCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCE
Confidence 445556788899998877777887766655432211 00 10 00000 01123346789999999999999999999
Q ss_pred EEEc
Q psy13922 194 LFAD 197 (509)
Q Consensus 194 lI~D 197 (509)
||-.
T Consensus 102 VIPE 105 (357)
T cd06563 102 VIPE 105 (357)
T ss_pred EEEe
Confidence 8864
No 461
>PRK07024 short chain dehydrogenase; Provisional
Probab=44.13 E-value=2.9e+02 Score=26.20 Aligned_cols=79 Identities=10% Similarity=0.028 Sum_probs=44.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCC--EEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNM--EQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~--~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.........+.... ++..+..|-. |.+.+++.++...
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~i~~~~~~~~ 73 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGA----TLGLVARRTDALQAFAARLPKAARVSVYAADVR-----DADALAAAAADFI 73 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCC-----CHHHHHHHHHHHH
Confidence 3578887776666666777777776 777766543333333222211 4555555432 5677777666532
Q ss_pred cc-CCceEEEE
Q psy13922 155 KH-CNPRAIVI 164 (509)
Q Consensus 155 ~~-~~~~~ivi 164 (509)
+. ..+.+++-
T Consensus 74 ~~~g~id~lv~ 84 (257)
T PRK07024 74 AAHGLPDVVIA 84 (257)
T ss_pred HhCCCCCEEEE
Confidence 22 24565553
No 462
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=44.04 E-value=2.2e+02 Score=27.04 Aligned_cols=102 Identities=11% Similarity=0.042 Sum_probs=52.0
Q ss_pred CCCcEEEeCCHH--HHHHHHHHHhhcCCCCCCCeEEEcCC-------CC----h---hHHHHHHhcCCEEEEEecCCCCC
Q psy13922 75 DWQDVILSAGAS--DGIKSVLKLLIEDVDGKKPGVLIPIP-------QY----P---LYSASLAEFNMEQIGYYLDESKQ 138 (509)
Q Consensus 75 ~~~~i~~t~G~~--~al~~~~~~l~~~gd~~~~~Vlv~~p-------~y----~---~~~~~~~~~g~~~~~v~~~~~~~ 138 (509)
....+++|.|+. ..=..+.+.|.+.|. .|++... .+ . .....++..|.++..++.|-.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~----~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~-- 78 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGA----DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLT-- 78 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCC----eEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCC--
Confidence 334677776652 333455666667776 6766421 11 1 112223455777777766533
Q ss_pred CCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCC--CCCCCHHHHHHHHH
Q psy13922 139 WGLPISELERSITEARKH-CNPRAIVIINPGNPT--GQVLTKENIQDIIK 185 (509)
Q Consensus 139 ~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPt--G~~~s~~~l~~l~~ 185 (509)
|.+.+++.+....+. .++.+++.+...... -...+.+++++..+
T Consensus 79 ---~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 125 (256)
T PRK12859 79 ---QNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYM 125 (256)
T ss_pred ---CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 677777777664332 245555543221111 12445555555544
No 463
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=43.79 E-value=2.8e+02 Score=25.92 Aligned_cols=82 Identities=12% Similarity=0.031 Sum_probs=45.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc--CCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF--NMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
...+++|.|+...-..+.+.|.+.|. .|++..-.-.......... +.++..+..| -.|.+.+.+.++..
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~ 75 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGA----RVVVTDRNEEAAERVAAEILAGGRAIAVAAD-----VSDEADVEAAVAAA 75 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHhcCCeEEEEECC-----CCCHHHHHHHHHHH
Confidence 34677776665555567777777776 6766554333333222222 3455555554 33677887777653
Q ss_pred hc-cCCceEEEEeC
Q psy13922 154 RK-HCNPRAIVIIN 166 (509)
Q Consensus 154 ~~-~~~~~~ivi~~ 166 (509)
.. ..++.+|+.+.
T Consensus 76 ~~~~~~~d~vi~~a 89 (251)
T PRK07231 76 LERFGSVDILVNNA 89 (251)
T ss_pred HHHhCCCCEEEECC
Confidence 22 13567766543
No 464
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=43.70 E-value=2.8e+02 Score=25.95 Aligned_cols=81 Identities=5% Similarity=0.046 Sum_probs=47.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPL---YSASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++. ...-.. ....++..+.++..+..|-. |.+.+.++++.
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~----~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 75 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGY----DIAVNYARSRKAAEETAEEIEALGRKALAVKANVG-----DVEKIKEMFAQ 75 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC----EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHH
Confidence 3577777776666667777888776 76652 221111 12233445677777766533 67777777765
Q ss_pred hhcc-CCceEEEEeC
Q psy13922 153 ARKH-CNPRAIVIIN 166 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~ 166 (509)
.... .++++++-+.
T Consensus 76 ~~~~~~~id~vi~~a 90 (250)
T PRK08063 76 IDEEFGRLDVFVNNA 90 (250)
T ss_pred HHHHcCCCCEEEECC
Confidence 4322 2466666543
No 465
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=43.30 E-value=2.9e+02 Score=26.04 Aligned_cols=81 Identities=9% Similarity=-0.008 Sum_probs=47.6
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. +|++..-.-.... ..++..|.++..+..|-. |.+.++++++.
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 80 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA----EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVT-----DHDAVRAAIDA 80 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC----EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCC-----CHHHHHHHHHH
Confidence 34688887766666666777777776 7777654322222 223344666666666533 67777777765
Q ss_pred hhcc-CCceEEEEe
Q psy13922 153 ARKH-CNPRAIVII 165 (509)
Q Consensus 153 ~~~~-~~~~~ivi~ 165 (509)
..+. .++.+++.+
T Consensus 81 ~~~~~~~~d~li~~ 94 (255)
T PRK07523 81 FEAEIGPIDILVNN 94 (255)
T ss_pred HHHhcCCCCEEEEC
Confidence 3322 346666543
No 466
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=42.81 E-value=3e+02 Score=27.00 Aligned_cols=55 Identities=13% Similarity=0.016 Sum_probs=33.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD 134 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 134 (509)
..|+..+++..+...+..+- .-|- +..|+++.-.-..-...++..|++++.++.+
T Consensus 54 ~~vv~~SsGN~g~alA~~a~-~~G~--~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 54 TTIIEPTSGNTGIGLAMVAA-AKGY--RFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred CEEEEeCCChHHHHHHHHHH-HcCC--eEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 34666666655554444332 2232 2256666655566778889999999988744
No 467
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=42.78 E-value=2e+02 Score=28.32 Aligned_cols=54 Identities=7% Similarity=0.035 Sum_probs=32.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEec
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYL 133 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 133 (509)
..|+.++++..+..++.-+-. .|- +-.|+++.-.-..-...++..|++++.++.
T Consensus 66 ~~iv~~ssGN~g~alA~~a~~-~G~--~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 66 KGVVAASAGNHAQGVAYAAKL-LGI--PATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred CcEEEECCCHHHHHHHHHHHH-cCC--CEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 457666666666655544432 332 124555554444567778899999998874
No 468
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=42.22 E-value=1e+02 Score=30.69 Aligned_cols=71 Identities=15% Similarity=0.157 Sum_probs=43.3
Q ss_pred cCCCChhHHHHHHh--cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHH
Q psy13922 110 PIPQYPLYSASLAE--FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFA 187 (509)
Q Consensus 110 ~~p~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia 187 (509)
.-|+|....+..+. -..-++.+|... -++.+++..+. .++.+++.+-.. +.++-++|.++|
T Consensus 50 G~~~y~sv~dlp~~~~~DlAvi~vp~~~------v~~~l~e~~~~-----gvk~avI~s~Gf------~~~~~~~l~~~a 112 (291)
T PRK05678 50 GLPVFNTVAEAVEATGANASVIYVPPPF------AADAILEAIDA-----GIDLIVCITEGI------PVLDMLEVKAYL 112 (291)
T ss_pred CeeccCCHHHHhhccCCCEEEEEcCHHH------HHHHHHHHHHC-----CCCEEEEECCCC------CHHHHHHHHHHH
Confidence 34456666666654 345555555321 25667776665 687766643322 234446899999
Q ss_pred HHCCcEEEEc
Q psy13922 188 HREKLFLFAD 197 (509)
Q Consensus 188 ~~~~i~lI~D 197 (509)
+++|+.++==
T Consensus 113 ~~~girvlGP 122 (291)
T PRK05678 113 ERKKTRLIGP 122 (291)
T ss_pred HHcCCEEECC
Confidence 9999998743
No 469
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=41.99 E-value=1.6e+02 Score=31.72 Aligned_cols=65 Identities=12% Similarity=0.068 Sum_probs=44.8
Q ss_pred HHhcC-CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC--CcEEEEc
Q psy13922 121 LAEFN-MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE--KLFLFAD 197 (509)
Q Consensus 121 ~~~~g-~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~--~i~lI~D 197 (509)
++..| .++..++...+ .++.+.+.+.+... ++++|.++.. ..+.....++++.+++. ++.+|+=
T Consensus 32 L~~~G~~~V~iiD~~~~---~~~~~~~~~~l~~~----~pdvVgis~~------t~~~~~a~~~~~~~k~~~P~~~iV~G 98 (497)
T TIGR02026 32 LLDAGYHDVTFLDAMTG---PLTDEKLVERLRAH----CPDLVLITAI------TPAIYIACETLKFARERLPNAIIVLG 98 (497)
T ss_pred HHhcCCcceEEeccccc---CCCHHHHHHHHHhc----CcCEEEEecC------cccHHHHHHHHHHHHHHCCCCEEEEc
Confidence 56778 57777765433 56778888888765 7888888632 22345577888888875 8888864
Q ss_pred c
Q psy13922 198 E 198 (509)
Q Consensus 198 e 198 (509)
-
T Consensus 99 G 99 (497)
T TIGR02026 99 G 99 (497)
T ss_pred C
Confidence 3
No 470
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=41.96 E-value=85 Score=27.22 Aligned_cols=59 Identities=20% Similarity=0.189 Sum_probs=42.5
Q ss_pred CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC-HHHHHHHHHHHHH-C-CcEE-EEcccCCc
Q psy13922 140 GLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT-KENIQDIIKFAHR-E-KLFL-FADEVYQD 202 (509)
Q Consensus 140 ~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s-~~~l~~l~~ia~~-~-~i~l-I~Deay~~ 202 (509)
..+.+.|.+.+++. ++..||+-.|-|..|..-+ ....+++++.+++ + ++.| .+||.|+.
T Consensus 37 ~~~~~~l~~li~~~----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 37 EKDIEELKKLIEEY----QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCHHHHHHHHHHC----CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred chHHHHHHHHHHHh----CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 56899999999986 8999999999998887433 3445555555444 3 6655 57888765
No 471
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=41.86 E-value=3.7e+02 Score=26.87 Aligned_cols=86 Identities=14% Similarity=0.119 Sum_probs=45.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..|+..+++..+..++..+-. .|- +-.|+++...-..-...++.+|++++.++.+ +.-+...+.+.+.+.
T Consensus 52 ~~vv~aSsGN~g~alA~~a~~-~G~--~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~----~~~~~~~~~~~l~~~--- 121 (316)
T cd06448 52 VHVVCSSGGNAGLAAAYAARK-LGV--PCTIVVPESTKPRVVEKLRDEGATVVVHGKV----WWEADNYLREELAEN--- 121 (316)
T ss_pred CeEEEeCCcHHHHHHHHHHHH-cCC--CEEEEECCCCCHHHHHHHHHcCCEEEEECCc----hHHHHHHHHHHHHhc---
Confidence 356666666556555443332 222 1256666555455678888999999987632 100122333333331
Q ss_pred CCceEEEEeCCCCCCCC
Q psy13922 157 CNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~ 173 (509)
.+...+++..+||.+.
T Consensus 122 -~~~~~~~~~~~n~~~~ 137 (316)
T cd06448 122 -DPGPVYVHPFDDPLIW 137 (316)
T ss_pred -cCCcEEeCCCCCchhh
Confidence 2355666544566543
No 472
>PRK08263 short chain dehydrogenase; Provisional
Probab=41.72 E-value=3.2e+02 Score=26.16 Aligned_cols=79 Identities=10% Similarity=0.037 Sum_probs=42.0
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH- 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~- 156 (509)
.+++|.++...=..+.+.|.+.|. .|++..-.-..........+.++..+..|-. |.+.+++.++...+.
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERGD----RVVATARDTATLADLAEKYGDRLLPLALDVT-----DRAAVFAAVETAVEHF 75 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHhccCCeeEEEccCC-----CHHHHHHHHHHHHHHc
Confidence 477776665555566667777776 7776554333233333333434444444422 566776666553221
Q ss_pred CCceEEEEe
Q psy13922 157 CNPRAIVII 165 (509)
Q Consensus 157 ~~~~~ivi~ 165 (509)
.++.+++.+
T Consensus 76 ~~~d~vi~~ 84 (275)
T PRK08263 76 GRLDIVVNN 84 (275)
T ss_pred CCCCEEEEC
Confidence 245665544
No 473
>PRK09242 tropinone reductase; Provisional
Probab=41.71 E-value=3.1e+02 Score=25.89 Aligned_cols=100 Identities=15% Similarity=0.068 Sum_probs=52.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH---hc--CCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA---EF--NMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~---~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-........ .. +.++..+..|-. |.+.++++++
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G~----~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~ 80 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLGA----DVLIVARDADALAQARDELAEEFPEREVHGLAADVS-----DDEDRRAILD 80 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC----EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHH
Confidence 4577776655555556666777776 77776544333222222 22 556666665532 6677777776
Q ss_pred hhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .+..+++.+...+..+ ...+.+++++..+
T Consensus 81 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 117 (257)
T PRK09242 81 WVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFE 117 (257)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHh
Confidence 54322 3566666443222211 2345555555443
No 474
>PRK06484 short chain dehydrogenase; Validated
Probab=41.67 E-value=2.7e+02 Score=29.78 Aligned_cols=80 Identities=9% Similarity=0.068 Sum_probs=49.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..|.++..+..|-. |.+.++++++...+.
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 76 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAGD----QVVVADRNVERARERADSLGPDHHALAMDVS-----DEAQIREGFEQLHRE 76 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhCCceeEEEeccC-----CHHHHHHHHHHHHHH
Confidence 4577777776666667777888887 7777654434444555556666666666533 667777777653322
Q ss_pred -CCceEEEEe
Q psy13922 157 -CNPRAIVII 165 (509)
Q Consensus 157 -~~~~~ivi~ 165 (509)
.++.++|-+
T Consensus 77 ~g~iD~li~n 86 (520)
T PRK06484 77 FGRIDVLVNN 86 (520)
T ss_pred hCCCCEEEEC
Confidence 246655533
No 475
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=41.60 E-value=2.4e+02 Score=26.72 Aligned_cols=79 Identities=13% Similarity=0.093 Sum_probs=42.8
Q ss_pred CCcEEEeCCH--HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc-CCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGA--SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF-NMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~--~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+ ...=..+.+.|.+.|. +|++..-. ......++.. +.++..+..|- -|.+.+++.++.
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~----~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~ 76 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGA----TVIYTYQN-DRMKKSLQKLVDEEDLLVECDV-----ASDESIERAFAT 76 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCC----EEEEecCc-hHHHHHHHhhccCceeEEeCCC-----CCHHHHHHHHHH
Confidence 3457777766 3555666777777887 78776433 2222222222 33444555542 256777776665
Q ss_pred hhcc-CCceEEEE
Q psy13922 153 ARKH-CNPRAIVI 164 (509)
Q Consensus 153 ~~~~-~~~~~ivi 164 (509)
..+. .+..+++.
T Consensus 77 ~~~~~g~iD~lv~ 89 (252)
T PRK06079 77 IKERVGKIDGIVH 89 (252)
T ss_pred HHHHhCCCCEEEE
Confidence 3322 35666553
No 476
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=41.56 E-value=2.6e+02 Score=27.04 Aligned_cols=78 Identities=12% Similarity=0.117 Sum_probs=46.8
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEe----cCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYY----LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~----~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.+++ .|..+...++.+|.+.+.+. ... +.-.+++..+.+.++...+ .++++|+...-.|+ ...+
T Consensus 155 ~~v~---~H~af~Y~~~~yGl~~~~~~~~~~~~~-~~~~ps~~~l~~l~~~ik~-~~v~~if~e~~~~~-------k~~~ 222 (264)
T cd01020 155 PVAA---TEPVFDYLLDALGMKERTPKGYTATTE-SETEPSPADIAAFQNAIKN-RQIDALIVNPQQAS-------SATT 222 (264)
T ss_pred eEEE---eCchHHHHHHHCCCcccCHHHHHhhhc-CCCCCCHHHHHHHHHHHHh-CCCCEEEeCCCCCc-------HHHH
Confidence 5666 45567788899999876431 111 1225666666665553322 26777776433332 4466
Q ss_pred HHHHHHHHCCcEEE
Q psy13922 182 DIIKFAHREKLFLF 195 (509)
Q Consensus 182 ~l~~ia~~~~i~lI 195 (509)
.|..++++.|+.++
T Consensus 223 ~l~~la~~~~~~v~ 236 (264)
T cd01020 223 NITGLAKRSGVPVV 236 (264)
T ss_pred HHHHHHHHcCCCEE
Confidence 67788899988774
No 477
>PLN02970 serine racemase
Probab=41.27 E-value=2e+02 Score=29.02 Aligned_cols=54 Identities=6% Similarity=-0.036 Sum_probs=36.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEec
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYL 133 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 133 (509)
..|+..+++..++.++.-+-.. |- +-.|+++..+...-...++..|++++.++-
T Consensus 76 ~~vv~aSsGN~g~alA~~a~~~-G~--~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 76 KGVVTHSSGNHAAALALAAKLR-GI--PAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CC--CEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 4577777777777665544432 21 236777776666667788999999998763
No 478
>PRK05854 short chain dehydrogenase; Provisional
Probab=41.10 E-value=2.8e+02 Score=27.42 Aligned_cols=79 Identities=11% Similarity=0.084 Sum_probs=43.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh----c-CCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE----F-NMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~----~-g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
..+++|.|+...=..+.+.|.+.|. +|++..-.-.......+. . +.++..+..|-. |++.+++..+
T Consensus 15 k~~lITGas~GIG~~~a~~La~~G~----~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~-----d~~sv~~~~~ 85 (313)
T PRK05854 15 KRAVVTGASDGLGLGLARRLAAAGA----EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLS-----SLASVAALGE 85 (313)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCC-----CHHHHHHHHH
Confidence 4577776666555566677777776 777765443333222221 1 345555555532 6777777766
Q ss_pred hhhcc-CCceEEEE
Q psy13922 152 EARKH-CNPRAIVI 164 (509)
Q Consensus 152 ~~~~~-~~~~~ivi 164 (509)
...+. .+...+|-
T Consensus 86 ~~~~~~~~iD~li~ 99 (313)
T PRK05854 86 QLRAEGRPIHLLIN 99 (313)
T ss_pred HHHHhCCCccEEEE
Confidence 54322 34566553
No 479
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=40.98 E-value=3.2e+02 Score=25.95 Aligned_cols=81 Identities=11% Similarity=0.064 Sum_probs=47.0
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-...... +...|.++..++.|-. |.+.+++++..
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~----~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~ 80 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGA----TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVT-----DEDGVQAMVSQ 80 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC----eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHH
Confidence 34577777766555566777777776 676654333322222 3334666766666533 67777777765
Q ss_pred hhcc-CCceEEEEe
Q psy13922 153 ARKH-CNPRAIVII 165 (509)
Q Consensus 153 ~~~~-~~~~~ivi~ 165 (509)
.... .++.+++.+
T Consensus 81 ~~~~~~~id~li~~ 94 (265)
T PRK07097 81 IEKEVGVIDILVNN 94 (265)
T ss_pred HHHhCCCCCEEEEC
Confidence 4322 346676654
No 480
>PRK05855 short chain dehydrogenase; Validated
Probab=40.56 E-value=4.9e+02 Score=27.91 Aligned_cols=100 Identities=12% Similarity=0.049 Sum_probs=53.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|+...-..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++..
T Consensus 316 ~~~lv~G~s~giG~~~a~~l~~~G~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~ 386 (582)
T PRK05855 316 KLVVVTGAGSGIGRETALAFAREGA----EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVS-----DADAMEAFAEWV 386 (582)
T ss_pred CEEEEECCcCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHH
Confidence 3566666655555556677777776 777765443333222 3344666666666533 677777777654
Q ss_pred hcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-....|. ..+.+++++..+
T Consensus 387 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 421 (582)
T PRK05855 387 RAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLD 421 (582)
T ss_pred HHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 322 34666554322222222 234455555444
No 481
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=40.55 E-value=2.3e+02 Score=24.53 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=38.2
Q ss_pred HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC
Q psy13922 119 ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE 190 (509)
Q Consensus 119 ~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~ 190 (509)
..++..|.+++.+-. ...++++.+++.+. ++++|.++.-+.. +....+++.+.+++.
T Consensus 25 ~~lr~~G~eVi~LG~------~vp~e~i~~~a~~~----~~d~V~lS~~~~~-----~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 25 RALTEAGFEVINLGV------MTSQEEFIDAAIET----DADAILVSSLYGH-----GEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHCCCEEEECCC------CCCHHHHHHHHHHc----CCCEEEEcCcccc-----CHHHHHHHHHHHHhc
Confidence 446777999887532 34578887777765 7888888755443 234567777777665
No 482
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=40.44 E-value=3.7e+02 Score=26.46 Aligned_cols=105 Identities=16% Similarity=0.145 Sum_probs=58.9
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC--CCChhHHH--HHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI--PQYPLYSA--SLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
+....+++|.+-+.....++....+.|. +-+|++.+ |.+.+... .+...|.++..++-. .+-..
T Consensus 107 I~~g~~ILTh~~S~tv~~~l~~A~~~gk--~~~V~v~EsrP~~qG~~la~eL~~~GI~vtlI~Ds----------a~~~~ 174 (275)
T PRK08335 107 IDDGDVIITHSFSSAVLEILKTAKRKGK--RFKVILTESAPDYEGLALANELEFLGIEFEVITDA----------QLGLF 174 (275)
T ss_pred cCCCCEEEEECCcHHHHHHHHHHHHcCC--ceEEEEecCCCchhHHHHHHHHHHCCCCEEEEecc----------HHHHH
Confidence 3455688887766555555555555442 33677654 76665443 244558777765421 12222
Q ss_pred HHhhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 150 ITEARKHCNPRAIVI-INPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 150 i~~~~~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
+. ++..+++ ..---..|.++++----.++-.|+.|++++++
T Consensus 175 m~------~vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 175 AK------EATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred HH------hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 33 3555555 23233335555544445677788899988886
No 483
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=40.20 E-value=2.9e+02 Score=28.89 Aligned_cols=94 Identities=13% Similarity=0.052 Sum_probs=47.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.|+...=..+.+.|.+.|. +|++..-.-..........+..+..+..|-. |.+.+.+.+.
T Consensus 178 gK~VLITGASgGIG~aLA~~La~~G~----~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs-----d~~~v~~~l~---- 244 (406)
T PRK07424 178 GKTVAVTGASGTLGQALLKELHQQGA----KVVALTSNSDKITLEINGEDLPVKTLHWQVG-----QEAALAELLE---- 244 (406)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC-----CHHHHHHHhC----
Confidence 34677777766555666677777776 7766543222221222212222223333321 4566665553
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
++.++|.+...++.+ ..+.+++++..+
T Consensus 245 --~IDiLInnAGi~~~~-~~s~e~~~~~~~ 271 (406)
T PRK07424 245 --KVDILIINHGINVHG-ERTPEAINKSYE 271 (406)
T ss_pred --CCCEEEECCCcCCCC-CCCHHHHHHHHH
Confidence 477766554334433 345555555444
No 484
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=39.97 E-value=1.7e+02 Score=32.08 Aligned_cols=145 Identities=12% Similarity=0.096 Sum_probs=84.1
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
.|+.|.||-+..+.+...+ .+| ..||.+|--.-.. ..++..|.+...+.- .++.++-...+....
T Consensus 37 vvmPTGgGKSlCyQiPAll-~~G-----~TLVVSPLiSLM~DQV~~l~~~Gi~A~~lnS------~l~~~e~~~v~~~l~ 104 (590)
T COG0514 37 VVMPTGGGKSLCYQIPALL-LEG-----LTLVVSPLISLMKDQVDQLEAAGIRAAYLNS------TLSREERQQVLNQLK 104 (590)
T ss_pred EEccCCCCcchHhhhHHHh-cCC-----CEEEECchHHHHHHHHHHHHHcCceeehhhc------ccCHHHHHHHHHHHh
Confidence 4566888887777666444 466 5566666655443 445667876666532 445555555444432
Q ss_pred ccCCceEEEEe--CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcccc-HHHHHHHhCCCCCCceeE
Q psy13922 155 KHCNPRAIVII--NPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYS-FKKVLVEMGEPYKSMELA 231 (509)
Q Consensus 155 ~~~~~~~ivi~--~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~vi 231 (509)
. ...++++++ .-.+| ..++.|. +-.-..+++||+|....|+. .|.+ +..
T Consensus 105 ~-g~~klLyisPErl~~~-------~f~~~L~---~~~i~l~vIDEAHCiSqWGh--dFRP~Y~~--------------- 156 (590)
T COG0514 105 S-GQLKLLYISPERLMSP-------RFLELLK---RLPISLVAIDEAHCISQWGH--DFRPDYRR--------------- 156 (590)
T ss_pred c-CceeEEEECchhhcCh-------HHHHHHH---hCCCceEEechHHHHhhcCC--ccCHhHHH---------------
Confidence 1 167888885 22333 3344433 34567999999998877752 3332 222
Q ss_pred EEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHh
Q psy13922 232 SFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 232 ~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~ 267 (509)
++.+.+.| |..++-.++ .|+++.+.+.+...
T Consensus 157 -lg~l~~~~---~~~p~~AlT-ATA~~~v~~DI~~~ 187 (590)
T COG0514 157 -LGRLRAGL---PNPPVLALT-ATATPRVRDDIREQ 187 (590)
T ss_pred -HHHHHhhC---CCCCEEEEe-CCCChHHHHHHHHH
Confidence 22334433 456666664 45788877777544
No 485
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=39.96 E-value=2.5e+02 Score=26.39 Aligned_cols=90 Identities=19% Similarity=0.320 Sum_probs=54.3
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh-HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL-YSASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
+....|++..||..|..-+ +.|.+.|. .|.+..|...+ .....+..+...+. . .++.+.+.
T Consensus 10 l~~k~VlvvGgG~va~rKa-~~ll~~ga----~v~Vvs~~~~~el~~~~~~~~i~~~~-----~---~~~~~~~~----- 71 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKA-RLLLKAGA----DVTVVSPEFEPELKALIEEGKIKWIE-----R---EFDAEDLD----- 71 (210)
T ss_pred cCCCEEEEECCCHHHHHHH-HHHHhcCC----EEEEEcCCccHHHHHHHHhcCcchhh-----c---ccChhhhc-----
Confidence 4455788988988888755 45666776 89998888833 44444444422221 1 22333331
Q ss_pred hhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEE
Q psy13922 153 ARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFL 194 (509)
Q Consensus 153 ~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~l 194 (509)
. ..+++..-+|+ +.=++|.+.|+++++++
T Consensus 72 -----~-~~lviaAt~d~-------~ln~~i~~~a~~~~i~v 100 (210)
T COG1648 72 -----D-AFLVIAATDDE-------ELNERIAKAARERRILV 100 (210)
T ss_pred -----C-ceEEEEeCCCH-------HHHHHHHHHHHHhCCce
Confidence 2 33344434444 55689999999998765
No 486
>PRK06841 short chain dehydrogenase; Provisional
Probab=39.88 E-value=3.2e+02 Score=25.62 Aligned_cols=81 Identities=11% Similarity=0.020 Sum_probs=43.3
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.++...=..+.+.|.+.|. .|++..-............+.++..++.|- .|.+.+++.++...+
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~----~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGA----RVALLDRSEDVAEVAAQLLGGNAKGLVCDV-----SDSQSVEAAVAAVIS 85 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHhhCCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 34677776665555566677777776 777665443322211122233444455442 267777776665322
Q ss_pred c-CCceEEEEe
Q psy13922 156 H-CNPRAIVII 165 (509)
Q Consensus 156 ~-~~~~~ivi~ 165 (509)
. .+..+++-+
T Consensus 86 ~~~~~d~vi~~ 96 (255)
T PRK06841 86 AFGRIDILVNS 96 (255)
T ss_pred HhCCCCEEEEC
Confidence 2 246666644
No 487
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=39.86 E-value=3.5e+02 Score=25.94 Aligned_cols=81 Identities=12% Similarity=-0.039 Sum_probs=45.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. .|++....-...... +...+.++..+..|-. |.+.+.+.++.
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~ 80 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGA----KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVL-----DKESLEQARQQ 80 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHHHH
Confidence 34577776665555677777777776 777765443322222 2334566666666532 56666666654
Q ss_pred hhcc-CCceEEEEe
Q psy13922 153 ARKH-CNPRAIVII 165 (509)
Q Consensus 153 ~~~~-~~~~~ivi~ 165 (509)
..+. .++.++|-+
T Consensus 81 ~~~~~g~id~li~~ 94 (278)
T PRK08277 81 ILEDFGPCDILING 94 (278)
T ss_pred HHHHcCCCCEEEEC
Confidence 3221 256666543
No 488
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=39.82 E-value=1.1e+02 Score=31.61 Aligned_cols=112 Identities=17% Similarity=0.136 Sum_probs=65.0
Q ss_pred eCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH-HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCce
Q psy13922 82 SAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA-SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPR 160 (509)
Q Consensus 82 t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~-~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~ 160 (509)
..|--++-..+...+-..+. +.=++..++...... -.-..+.+++.++..+.. ...+.+.|.+.++..- +..+
T Consensus 72 vvG~Deag~~L~~~l~~~~i---~~~l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee~~-~~~~~~~ll~~~~~~l--~~~~ 145 (467)
T COG2870 72 VVGKDEAGKALIELLKANGI---DSDLLRDKNRPTIVKLRVLSRNQQLLRLDFEEKF-PIEDENKLLEKIKNAL--KSFD 145 (467)
T ss_pred eeccchhHHHHHHHHHhcCc---ccceEeecCCCceeeeeeecccceEEEecccccC-cchhHHHHHHHHHHHh--hcCC
Confidence 35555555555555544332 133444444443221 122335667766554321 1234566666665532 2688
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCccc
Q psy13922 161 AIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204 (509)
Q Consensus 161 ~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~ 204 (509)
+++++..+- |..-+ .+.++++|++.|+++++|---.+|.
T Consensus 146 ~vVLSDY~K--G~L~~---~q~~I~~ar~~~~pVLvDPKg~Df~ 184 (467)
T COG2870 146 ALVLSDYAK--GVLTN---VQKMIDLAREAGIPVLVDPKGKDFE 184 (467)
T ss_pred EEEEecccc--ccchh---HHHHHHHHHHcCCcEEECCCCcchh
Confidence 999986654 55533 8999999999999999997655554
No 489
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=39.59 E-value=1.1e+02 Score=30.34 Aligned_cols=72 Identities=14% Similarity=0.151 Sum_probs=43.5
Q ss_pred CCCChhHHHHHHh--cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Q psy13922 111 IPQYPLYSASLAE--FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAH 188 (509)
Q Consensus 111 ~p~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~ 188 (509)
-|+|....+..+. -..-++.+|... -++.+++..+. .++.+++..-.. +..+-++|.++|+
T Consensus 49 ~~~y~sv~dlp~~~~~Dlavi~vpa~~------v~~~l~e~~~~-----Gvk~avIis~Gf------~e~~~~~l~~~a~ 111 (286)
T TIGR01019 49 LPVFDSVKEAVEETGANASVIFVPAPF------AADAIFEAIDA-----GIELIVCITEGI------PVHDMLKVKRYME 111 (286)
T ss_pred eeccCCHHHHhhccCCCEEEEecCHHH------HHHHHHHHHHC-----CCCEEEEECCCC------CHHHHHHHHHHHH
Confidence 3456666666554 244455544321 25666666665 787777644332 3334578999999
Q ss_pred HCCcEEEEccc
Q psy13922 189 REKLFLFADEV 199 (509)
Q Consensus 189 ~~~i~lI~Dea 199 (509)
++|+.++==..
T Consensus 112 ~~girilGPNc 122 (286)
T TIGR01019 112 ESGTRLIGPNC 122 (286)
T ss_pred HcCCEEECCCC
Confidence 99998874333
No 490
>PRK08246 threonine dehydratase; Provisional
Probab=39.59 E-value=3.9e+02 Score=26.57 Aligned_cols=73 Identities=15% Similarity=0.127 Sum_probs=47.1
Q ss_pred cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEe
Q psy13922 53 PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYY 132 (509)
Q Consensus 53 ~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 132 (509)
.|..+.|-++....... .....|+..+++..++..+..+-.. |- +..|+++...-......++.+|++++.++
T Consensus 49 tGS~K~R~a~~~~~~~~----~~~~~vv~aSsGN~g~a~A~~a~~~-G~--~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 121 (310)
T PRK08246 49 TGSFKARGAFNRLLAAP----VPAAGVVAASGGNAGLAVAYAAAAL-GV--PATVFVPETAPPAKVARLRALGAEVVVVG 121 (310)
T ss_pred CCCCHHHHHHHHHHhhc----ccCCeEEEeCCCHHHHHHHHHHHHc-CC--CEEEEECCCCcHHHHHHHHHCCCEEEEeC
Confidence 45577787776554322 1345677777777777666554432 21 22677776665666788899999998875
No 491
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=39.42 E-value=2.2e+02 Score=23.44 Aligned_cols=63 Identities=13% Similarity=0.079 Sum_probs=43.4
Q ss_pred HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC--CcEEEE
Q psy13922 119 ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE--KLFLFA 196 (509)
Q Consensus 119 ~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~--~i~lI~ 196 (509)
..++..|.++..+.... +.+++.+.+.+. ++++|.++.... .+.....++++..++. ++.+++
T Consensus 22 ~~l~~~G~~v~~~d~~~------~~~~l~~~~~~~----~pd~V~iS~~~~-----~~~~~~~~l~~~~k~~~p~~~iv~ 86 (121)
T PF02310_consen 22 AYLRKAGHEVDILDANV------PPEELVEALRAE----RPDVVGISVSMT-----PNLPEAKRLARAIKERNPNIPIVV 86 (121)
T ss_dssp HHHHHTTBEEEEEESSB-------HHHHHHHHHHT----TCSEEEEEESSS-----THHHHHHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHCCCeEEEECCCC------CHHHHHHHHhcC----CCcEEEEEccCc-----CcHHHHHHHHHHHHhcCCCCEEEE
Confidence 45677799998876542 458888877775 889988865422 2335577888877775 677776
No 492
>PRK07791 short chain dehydrogenase; Provisional
Probab=39.32 E-value=3.7e+02 Score=26.12 Aligned_cols=79 Identities=10% Similarity=-0.034 Sum_probs=44.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC---------hhHHH---HHHhcCCEEEEEecCCCCCCCCCHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY---------PLYSA---SLAEFNMEQIGYYLDESKQWGLPIS 144 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y---------~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~ 144 (509)
..+++|.|++..-..+.+.|.+.|. .|++..-.. ..... .+...|.++..+..|- -|.+
T Consensus 7 k~~lITGas~GIG~aia~~la~~G~----~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~ 77 (286)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFAAEGA----RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDI-----ADWD 77 (286)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCC-----CCHH
Confidence 4577777776666667777887776 777654222 22222 2233466666665553 2667
Q ss_pred HHHHHHHhhhcc-CCceEEEE
Q psy13922 145 ELERSITEARKH-CNPRAIVI 164 (509)
Q Consensus 145 ~L~~~i~~~~~~-~~~~~ivi 164 (509)
.+++.++...+. .++.++|-
T Consensus 78 ~v~~~~~~~~~~~g~id~lv~ 98 (286)
T PRK07791 78 GAANLVDAAVETFGGLDVLVN 98 (286)
T ss_pred HHHHHHHHHHHhcCCCCEEEE
Confidence 777766653322 35666553
No 493
>PRK06484 short chain dehydrogenase; Validated
Probab=39.04 E-value=3.1e+02 Score=29.31 Aligned_cols=77 Identities=14% Similarity=0.079 Sum_probs=44.3
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH- 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~- 156 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...+.
T Consensus 271 ~~lItGas~gIG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 271 VVAITGGARGIGRAVADRFAAAGD----RLLIIDRDAEGAKKLAEALGDEHLSVQADIT-----DEAAVESAFAQIQARW 341 (520)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhCCceeEEEccCC-----CHHHHHHHHHHHHHHc
Confidence 456666665555556667777776 7777655434444444555666655655532 667777776653322
Q ss_pred CCceEEE
Q psy13922 157 CNPRAIV 163 (509)
Q Consensus 157 ~~~~~iv 163 (509)
.++.++|
T Consensus 342 g~id~li 348 (520)
T PRK06484 342 GRLDVLV 348 (520)
T ss_pred CCCCEEE
Confidence 2456555
No 494
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=38.92 E-value=4.1e+02 Score=26.50 Aligned_cols=89 Identities=13% Similarity=0.129 Sum_probs=48.1
Q ss_pred EEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..| ..+++..+-.+-...-| .|++..|.|.. ++.+.+.+.++...+
T Consensus 80 vi~Gv~~~~t~~ai~~a~~A~~~Gad----~vlv~~P~y~~------------------------~~~~~l~~yf~~va~ 131 (309)
T cd00952 80 VFVGATTLNTRDTIARTRALLDLGAD----GTMLGRPMWLP------------------------LDVDTAVQFYRDVAE 131 (309)
T ss_pred EEEEeccCCHHHHHHHHHHHHHhCCC----EEEECCCcCCC------------------------CCHHHHHHHHHHHHH
Confidence 455433 44555544444333334 78887776532 233444444444322
Q ss_pred cC-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 156 HC-NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 156 ~~-~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
.. ...+++-++|. -||..++.+.+.+|++ -.|+.-|=|..
T Consensus 132 a~~~lPv~iYn~P~-~tg~~l~~~~l~~L~~---~pnivgiKdss 172 (309)
T cd00952 132 AVPEMAIAIYANPE-AFKFDFPRAAWAELAQ---IPQVVAAKYLG 172 (309)
T ss_pred hCCCCcEEEEcCch-hcCCCCCHHHHHHHhc---CCCEEEEEecC
Confidence 22 24555555553 3788999777777653 35777776643
No 495
>PRK08278 short chain dehydrogenase; Provisional
Probab=38.85 E-value=3.6e+02 Score=25.88 Aligned_cols=80 Identities=6% Similarity=-0.019 Sum_probs=46.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh----------HHHHHHhcCCEEEEEecCCCCCCCCCHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL----------YSASLAEFNMEQIGYYLDESKQWGLPISEL 146 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~----------~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L 146 (509)
..+++|.|+...=..+.+.|.+.|. .|++....... ....++..+.++..+..|- .|.+.+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~-----~~~~~i 77 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGA----NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDV-----RDEDQV 77 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecC-----CCHHHH
Confidence 4577777776666667777877776 77765543321 1122334466666666553 367777
Q ss_pred HHHHHhhhcc-CCceEEEEe
Q psy13922 147 ERSITEARKH-CNPRAIVII 165 (509)
Q Consensus 147 ~~~i~~~~~~-~~~~~ivi~ 165 (509)
++.+....+. .++.+++-+
T Consensus 78 ~~~~~~~~~~~g~id~li~~ 97 (273)
T PRK08278 78 AAAVAKAVERFGGIDICVNN 97 (273)
T ss_pred HHHHHHHHHHhCCCCEEEEC
Confidence 7776653222 356766644
No 496
>PRK06114 short chain dehydrogenase; Provisional
Probab=38.78 E-value=3.4e+02 Score=25.58 Aligned_cols=80 Identities=10% Similarity=-0.039 Sum_probs=45.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC-hh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY-PL---YSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y-~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
...+++|.|+...=..+.+.|.+.|. .|++....- .. ....++..+.++..++.|-. |.+.+++.+.
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~----~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~i~~~~~ 78 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGA----DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVT-----SKADLRAAVA 78 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHH
Confidence 34677777776666677777887776 777654321 11 22233344656666665532 6677777776
Q ss_pred hhhcc-CCceEEEE
Q psy13922 152 EARKH-CNPRAIVI 164 (509)
Q Consensus 152 ~~~~~-~~~~~ivi 164 (509)
..... .++..+|-
T Consensus 79 ~~~~~~g~id~li~ 92 (254)
T PRK06114 79 RTEAELGALTLAVN 92 (254)
T ss_pred HHHHHcCCCCEEEE
Confidence 54322 34566553
No 497
>PRK07825 short chain dehydrogenase; Provisional
Probab=38.63 E-value=3.6e+02 Score=25.75 Aligned_cols=79 Identities=16% Similarity=0.040 Sum_probs=40.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-..........+ ++..+..|-. |.+.+++.++...+.
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G~----~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~-----~~~~~~~~~~~~~~~ 75 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALGA----RVAIGDLDEALAKETAAELG-LVVGGPLDVT-----DPASFAAFLDAVEAD 75 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHhc-cceEEEccCC-----CHHHHHHHHHHHHHH
Confidence 4577776665555556667777776 77766543232333333333 2333333322 567776666654322
Q ss_pred -CCceEEEEe
Q psy13922 157 -CNPRAIVII 165 (509)
Q Consensus 157 -~~~~~ivi~ 165 (509)
.++.+++.+
T Consensus 76 ~~~id~li~~ 85 (273)
T PRK07825 76 LGPIDVLVNN 85 (273)
T ss_pred cCCCCEEEEC
Confidence 245555543
No 498
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=38.36 E-value=3.1e+02 Score=26.91 Aligned_cols=51 Identities=14% Similarity=0.202 Sum_probs=29.5
Q ss_pred HHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 144 SELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 144 ~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
+.+.+.++...+..+..+++-++|. .||..++.+.+++|. +-.++.-|=|.
T Consensus 113 ~~i~~~~~~ia~~~~~pv~lYn~P~-~~g~~l~~~~~~~L~---~~p~v~giK~s 163 (292)
T PRK03170 113 EGLYQHFKAIAEATDLPIILYNVPG-RTGVDILPETVARLA---EHPNIVGIKEA 163 (292)
T ss_pred HHHHHHHHHHHhcCCCCEEEEECcc-ccCCCCCHHHHHHHH---cCCCEEEEEEC
Confidence 4444444443222245555556665 478999977777774 33567666663
No 499
>PRK12743 oxidoreductase; Provisional
Probab=38.19 E-value=3.5e+02 Score=25.54 Aligned_cols=79 Identities=15% Similarity=0.007 Sum_probs=45.4
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC-CCChhH---HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI-PQYPLY---SASLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~-p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
.+++|.|+...=..+.+.|.+.|. .|++.. ..-... ...++..|.++..+..|-. |.+.+++.+++.
T Consensus 4 ~vlItGas~giG~~~a~~l~~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~ 74 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLAQQGF----DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLS-----DLPEGAQALDKL 74 (256)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC----EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHH
Confidence 577777776666677778888876 776542 222211 2233445666666655533 567776666653
Q ss_pred hcc-CCceEEEEe
Q psy13922 154 RKH-CNPRAIVII 165 (509)
Q Consensus 154 ~~~-~~~~~ivi~ 165 (509)
.+. .++.+++.+
T Consensus 75 ~~~~~~id~li~~ 87 (256)
T PRK12743 75 IQRLGRIDVLVNN 87 (256)
T ss_pred HHHcCCCCEEEEC
Confidence 322 356666644
No 500
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=37.28 E-value=4e+02 Score=25.95 Aligned_cols=95 Identities=15% Similarity=0.172 Sum_probs=57.4
Q ss_pred HHHHHHHhhcCCCCCCCeEEEcCCCCh---hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe
Q psy13922 89 IKSVLKLLIEDVDGKKPGVLIPIPQYP---LYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII 165 (509)
Q Consensus 89 l~~~~~~l~~~gd~~~~~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~ 165 (509)
+...++.+.+.|- +.||+++--+. .+...++..|..++.+-.. ..+.+.++...+. ....||+.
T Consensus 104 ~e~F~~~~~~aGv---dGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p-----~t~~~Ri~~i~~~-----a~gFiY~v 170 (259)
T PF00290_consen 104 IERFFKEAKEAGV---DGLIIPDLPPEESEELREAAKKHGLDLIPLVAP-----TTPEERIKKIAKQ-----ASGFIYLV 170 (259)
T ss_dssp HHHHHHHHHHHTE---EEEEETTSBGGGHHHHHHHHHHTT-EEEEEEET-----TS-HHHHHHHHHH------SSEEEEE
T ss_pred hHHHHHHHHHcCC---CEEEEcCCChHHHHHHHHHHHHcCCeEEEEECC-----CCCHHHHHHHHHh-----CCcEEEee
Confidence 4444555544441 27888875444 3556667788887776433 2245666666555 56778887
Q ss_pred CCCCCCCCCCC-HHHHHHHHHHHHHC-CcEEEE
Q psy13922 166 NPGNPTGQVLT-KENIQDIIKFAHRE-KLFLFA 196 (509)
Q Consensus 166 ~p~NPtG~~~s-~~~l~~l~~ia~~~-~i~lI~ 196 (509)
.-...||..-. .+++.++++.++++ +.++++
T Consensus 171 s~~GvTG~~~~~~~~l~~~i~~ik~~~~~Pv~v 203 (259)
T PF00290_consen 171 SRMGVTGSRTELPDELKEFIKRIKKHTDLPVAV 203 (259)
T ss_dssp SSSSSSSTTSSCHHHHHHHHHHHHHTTSS-EEE
T ss_pred ccCCCCCCcccchHHHHHHHHHHHhhcCcceEE
Confidence 77888887543 46788888887776 355554
Done!