Query psy13922
Match_columns 509
No_of_seqs 159 out of 2193
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 23:55:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ihj_A Alanine aminotransferas 100.0 1.3E-54 4.5E-59 462.6 40.5 417 4-509 80-498 (498)
2 3tcm_A Alanine aminotransferas 100.0 2.8E-52 9.5E-57 445.1 42.4 413 4-509 81-499 (500)
3 1b5p_A Protein (aspartate amin 100.0 1.6E-43 5.4E-48 364.8 32.4 342 22-502 39-383 (385)
4 3fvs_A Kynurenine--oxoglutarat 100.0 4E-43 1.4E-47 365.6 28.6 380 5-503 15-421 (422)
5 3dyd_A Tyrosine aminotransfera 100.0 5.4E-43 1.9E-47 366.0 29.3 349 25-505 71-425 (427)
6 3b46_A Aminotransferase BNA3; 100.0 6.4E-43 2.2E-47 367.7 29.1 361 22-500 65-443 (447)
7 3aow_A Putative uncharacterize 100.0 3.2E-42 1.1E-46 362.5 33.8 370 6-506 64-447 (448)
8 3jtx_A Aminotransferase; NP_28 100.0 1.7E-41 5.7E-46 350.2 36.4 352 22-501 38-395 (396)
9 3e2y_A Kynurenine-oxoglutarate 100.0 1E-42 3.5E-47 360.9 26.8 374 6-499 11-408 (410)
10 3ele_A Amino transferase; RER0 100.0 3.3E-42 1.1E-46 355.8 30.0 338 22-505 43-397 (398)
11 3fdb_A Beta C-S lyase, putativ 100.0 1E-41 3.5E-46 349.2 31.3 341 22-503 31-375 (377)
12 1gd9_A Aspartate aminotransfer 100.0 2.8E-41 9.7E-46 347.8 34.7 364 6-503 13-385 (389)
13 3k7y_A Aspartate aminotransfer 100.0 1.2E-41 4.1E-46 353.0 32.0 335 26-502 48-403 (405)
14 1j32_A Aspartate aminotransfer 100.0 3.1E-41 1.1E-45 347.4 34.4 347 22-504 38-387 (388)
15 3h14_A Aminotransferase, class 100.0 1.8E-41 6.3E-46 349.6 32.1 342 22-505 39-383 (391)
16 3nra_A Aspartate aminotransfer 100.0 4.7E-41 1.6E-45 347.9 33.7 347 26-505 54-406 (407)
17 2o1b_A Aminotransferase, class 100.0 3.5E-41 1.2E-45 349.7 31.2 343 22-502 55-401 (404)
18 3dzz_A Putative pyridoxal 5'-p 100.0 5.4E-41 1.8E-45 345.3 32.0 349 22-504 35-389 (391)
19 2x5d_A Probable aminotransfera 100.0 2.3E-41 8E-46 351.6 29.3 348 22-504 45-398 (412)
20 2r2n_A Kynurenine/alpha-aminoa 100.0 7.9E-41 2.7E-45 349.3 32.8 333 48-504 73-424 (425)
21 1u08_A Hypothetical aminotrans 100.0 1.2E-40 4E-45 343.0 33.4 359 7-499 19-385 (386)
22 3kax_A Aminotransferase, class 100.0 8.5E-41 2.9E-45 342.9 32.1 345 22-501 32-382 (383)
23 3ezs_A Aminotransferase ASPB; 100.0 9.5E-41 3.3E-45 342.1 31.9 339 22-503 31-374 (376)
24 1c7n_A Cystalysin; transferase 100.0 1.1E-40 3.8E-45 344.5 31.9 352 22-507 39-396 (399)
25 2dou_A Probable N-succinyldiam 100.0 1.3E-40 4.3E-45 341.5 30.5 339 22-501 33-375 (376)
26 2o0r_A RV0858C (N-succinyldiam 100.0 9.3E-41 3.2E-45 346.9 29.8 377 6-506 13-398 (411)
27 1bw0_A TAT, protein (tyrosine 100.0 6.1E-41 2.1E-45 348.6 28.2 350 27-506 52-415 (416)
28 3l8a_A METC, putative aminotra 100.0 1.2E-40 4E-45 347.5 30.2 348 21-502 68-420 (421)
29 1xi9_A Putative transaminase; 100.0 2E-40 6.7E-45 343.9 31.7 345 26-505 55-404 (406)
30 4dq6_A Putative pyridoxal phos 100.0 3.9E-40 1.3E-44 338.9 33.2 344 22-501 40-390 (391)
31 1d2f_A MALY protein; aminotran 100.0 3.1E-40 1E-44 340.3 31.2 342 26-504 42-389 (390)
32 1o4s_A Aspartate aminotransfer 100.0 4.8E-40 1.6E-44 339.2 32.6 332 26-502 55-387 (389)
33 3qgu_A LL-diaminopimelate amin 100.0 2.6E-40 8.8E-45 347.6 30.6 342 22-504 77-440 (449)
34 1vp4_A Aminotransferase, putat 100.0 7.3E-40 2.5E-44 341.9 33.5 371 7-507 32-421 (425)
35 1yiz_A Kynurenine aminotransfe 100.0 2.4E-40 8.4E-45 345.6 28.8 367 26-502 51-427 (429)
36 3piu_A 1-aminocyclopropane-1-c 100.0 1.6E-39 5.5E-44 340.2 34.2 345 47-505 80-433 (435)
37 4f4e_A Aromatic-amino-acid ami 100.0 8.7E-40 3E-44 340.8 30.4 335 5-411 33-394 (420)
38 3ei9_A LL-diaminopimelate amin 100.0 1.1E-39 3.6E-44 341.2 30.6 339 21-501 63-425 (432)
39 1iay_A ACC synthase 2, 1-amino 100.0 5.3E-39 1.8E-43 335.5 35.2 344 46-503 76-426 (428)
40 2z61_A Probable aspartate amin 100.0 4.6E-39 1.6E-43 329.2 33.6 326 26-502 43-369 (370)
41 3op7_A Aminotransferase class 100.0 1.1E-39 3.7E-44 334.3 28.0 326 33-506 47-373 (375)
42 2zc0_A Alanine glyoxylate tran 100.0 6.3E-39 2.2E-43 332.2 33.2 371 6-506 17-406 (407)
43 3t18_A Aminotransferase class 100.0 2.4E-39 8.2E-44 336.4 30.0 345 25-507 55-413 (413)
44 3rq1_A Aminotransferase class 100.0 3.3E-39 1.1E-43 335.9 31.0 347 25-505 56-416 (418)
45 3g0t_A Putative aminotransfera 100.0 2.8E-39 9.4E-44 338.1 30.0 350 22-503 52-436 (437)
46 2zyj_A Alpha-aminodipate amino 100.0 1.5E-38 5.2E-43 328.6 34.6 363 6-506 20-395 (397)
47 7aat_A Aspartate aminotransfer 100.0 3.7E-39 1.3E-43 333.5 28.9 313 27-411 48-375 (401)
48 2x5f_A Aspartate_tyrosine_phen 100.0 2.9E-39 9.8E-44 337.7 28.1 346 22-504 55-429 (430)
49 3fsl_A Aromatic-amino-acid ami 100.0 4.4E-39 1.5E-43 332.1 28.0 313 27-411 46-372 (397)
50 2gb3_A Aspartate aminotransfer 100.0 2.4E-38 8.2E-43 328.6 31.7 342 26-507 57-405 (409)
51 1v2d_A Glutamine aminotransfer 100.0 1.7E-38 5.7E-43 326.3 29.4 351 7-506 14-373 (381)
52 3ppl_A Aspartate aminotransfer 100.0 3E-38 1E-42 329.7 31.3 368 6-507 21-423 (427)
53 3g7q_A Valine-pyruvate aminotr 100.0 1.8E-38 6.3E-43 329.6 29.1 368 14-507 27-416 (417)
54 3ez1_A Aminotransferase MOCR f 100.0 2.9E-38 1E-42 329.2 30.0 372 6-507 13-418 (423)
55 3d6k_A Putative aminotransfera 100.0 3.9E-38 1.3E-42 328.6 30.7 355 22-507 40-421 (422)
56 2zy4_A L-aspartate beta-decarb 100.0 1.2E-38 4.1E-43 342.6 27.4 374 22-509 112-527 (546)
57 3f6t_A Aspartate aminotransfer 100.0 7.6E-39 2.6E-43 343.7 24.4 380 22-509 111-530 (533)
58 3asa_A LL-diaminopimelate amin 100.0 3E-38 1E-42 327.0 26.8 337 26-506 47-395 (400)
59 3ly1_A Putative histidinol-pho 100.0 6.4E-37 2.2E-41 311.0 34.0 326 22-503 24-351 (354)
60 4h51_A Aspartate aminotransfer 100.0 2.2E-37 7.6E-42 321.5 30.3 346 22-507 59-420 (420)
61 3get_A Histidinol-phosphate am 100.0 6E-37 2E-41 312.7 31.9 323 22-501 38-364 (365)
62 3ffh_A Histidinol-phosphate am 100.0 6.6E-37 2.3E-41 312.2 31.0 321 22-500 40-362 (363)
63 3if2_A Aminotransferase; YP_26 100.0 6.6E-37 2.2E-41 321.0 31.8 366 22-506 40-442 (444)
64 3meb_A Aspartate aminotransfer 100.0 6.7E-37 2.3E-41 321.9 31.8 339 27-503 69-443 (448)
65 1ajs_A Aspartate aminotransfer 100.0 2.6E-37 9E-42 320.7 27.9 362 5-503 14-410 (412)
66 3b1d_A Betac-S lyase; HET: PLP 100.0 6E-41 2.1E-45 346.2 0.0 347 22-502 39-391 (392)
67 1yaa_A Aspartate aminotransfer 100.0 2.5E-37 8.5E-42 321.1 27.0 343 25-503 47-410 (412)
68 2q7w_A Aspartate aminotransfer 100.0 1.4E-37 4.7E-42 320.8 24.7 314 26-411 45-371 (396)
69 3euc_A Histidinol-phosphate am 100.0 1.7E-36 5.9E-41 309.5 30.7 325 22-502 38-366 (367)
70 4eu1_A Mitochondrial aspartate 100.0 2.8E-37 9.5E-42 320.5 23.8 316 22-411 49-383 (409)
71 1fg7_A Histidinol phosphate am 100.0 3.9E-36 1.3E-40 306.5 28.1 278 45-417 51-330 (356)
72 3ftb_A Histidinol-phosphate am 100.0 2.5E-35 8.6E-40 299.9 33.2 291 26-417 40-331 (361)
73 1lc5_A COBD, L-threonine-O-3-p 100.0 1.3E-35 4.6E-40 302.9 31.0 323 26-504 38-360 (364)
74 2ay1_A Aroat, aromatic amino a 100.0 2.7E-36 9.2E-41 311.1 25.2 310 27-411 46-368 (394)
75 3bwn_A AT1G70560, L-tryptophan 100.0 3.3E-37 1.1E-41 318.7 14.3 305 45-503 55-386 (391)
76 3cq5_A Histidinol-phosphate am 100.0 2.4E-34 8.1E-39 294.4 33.2 322 26-502 44-366 (369)
77 3p1t_A Putative histidinol-pho 100.0 2.5E-34 8.6E-39 289.7 31.6 280 26-417 30-309 (337)
78 3fkd_A L-threonine-O-3-phospha 100.0 2.1E-34 7.1E-39 292.4 26.9 287 22-417 23-312 (350)
79 2hox_A ALLIIN lyase 1; cystein 100.0 5.8E-36 2E-40 312.8 12.3 326 22-502 64-423 (427)
80 3hdo_A Histidinol-phosphate am 100.0 8.8E-33 3E-37 281.6 32.5 289 22-414 34-324 (360)
81 1uu1_A Histidinol-phosphate am 100.0 5.2E-33 1.8E-37 280.6 24.0 277 26-411 33-309 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 2.1E-31 7.1E-36 275.0 31.8 330 26-505 58-393 (398)
83 2dr1_A PH1308 protein, 386AA l 100.0 7.7E-31 2.6E-35 268.8 31.1 342 7-506 9-381 (386)
84 1vjo_A Alanine--glyoxylate ami 100.0 5.4E-31 1.8E-35 271.2 25.1 320 23-501 42-392 (393)
85 1kmj_A Selenocysteine lyase; p 100.0 2.6E-30 9E-35 266.5 28.4 376 3-504 3-405 (406)
86 1t3i_A Probable cysteine desul 100.0 7.3E-30 2.5E-34 264.5 28.9 353 25-505 39-414 (420)
87 1eg5_A Aminotransferase; PLP-d 100.0 3.7E-30 1.2E-34 263.4 23.3 344 24-506 11-378 (384)
88 4hvk_A Probable cysteine desul 100.0 3E-29 1E-33 256.0 28.0 347 24-507 10-376 (382)
89 3tqx_A 2-amino-3-ketobutyrate 100.0 1.3E-28 4.3E-33 253.6 32.1 329 27-504 59-396 (399)
90 2huf_A Alanine glyoxylate amin 100.0 1.4E-29 5E-34 260.3 25.0 343 22-506 26-385 (393)
91 4eb5_A Probable cysteine desul 100.0 4E-29 1.4E-33 255.6 27.7 342 24-506 10-375 (382)
92 2z9v_A Aspartate aminotransfer 100.0 3.1E-29 1E-33 257.8 26.5 343 22-505 16-372 (392)
93 2ch1_A 3-hydroxykynurenine tra 100.0 2.6E-29 9E-34 258.6 25.5 346 23-509 26-388 (396)
94 2bwn_A 5-aminolevulinate synth 100.0 9.3E-29 3.2E-33 255.4 29.6 328 27-503 62-399 (401)
95 1e5e_A MGL, methionine gamma-l 100.0 3.3E-29 1.1E-33 259.8 26.0 203 20-270 24-239 (404)
96 1elu_A L-cysteine/L-cystine C- 100.0 3.4E-30 1.2E-34 264.4 17.4 343 26-500 28-388 (390)
97 1bs0_A Protein (8-amino-7-oxon 100.0 4.5E-28 1.5E-32 248.7 32.6 320 26-500 54-383 (384)
98 3cai_A Possible aminotransfera 100.0 9.5E-29 3.2E-33 255.5 27.5 322 6-413 14-365 (406)
99 3zrp_A Serine-pyruvate aminotr 100.0 4.7E-29 1.6E-33 255.1 24.4 323 22-505 9-364 (384)
100 2yrr_A Aminotransferase, class 100.0 4.6E-29 1.6E-33 252.0 24.0 321 22-503 7-352 (353)
101 3f9t_A TDC, L-tyrosine decarbo 100.0 1.7E-28 5.8E-33 251.7 28.2 352 18-502 32-396 (397)
102 1fc4_A 2-amino-3-ketobutyrate 100.0 1.1E-28 3.7E-33 254.8 26.4 327 27-504 61-397 (401)
103 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 1.4E-29 4.7E-34 258.3 19.2 335 23-503 18-369 (371)
104 1sff_A 4-aminobutyrate aminotr 100.0 1.7E-29 5.7E-34 263.0 20.1 332 27-505 59-425 (426)
105 1iug_A Putative aspartate amin 100.0 8.8E-29 3E-33 250.3 23.9 320 22-505 8-349 (352)
106 1svv_A Threonine aldolase; str 100.0 3E-28 1E-32 246.8 27.6 324 25-503 25-357 (359)
107 3kgw_A Alanine-glyoxylate amin 100.0 6.3E-28 2.1E-32 247.5 28.1 346 22-506 30-390 (393)
108 2w8t_A SPT, serine palmitoyltr 100.0 6.2E-28 2.1E-32 251.9 28.3 328 26-505 79-416 (427)
109 3nnk_A Ureidoglycine-glyoxylat 100.0 9.9E-28 3.4E-32 247.9 28.9 355 22-505 20-391 (411)
110 3kki_A CAI-1 autoinducer synth 100.0 1.4E-27 4.8E-32 247.4 29.9 322 27-504 75-404 (409)
111 3ffr_A Phosphoserine aminotran 100.0 6.9E-28 2.4E-32 244.4 26.5 342 22-501 11-361 (362)
112 3lvm_A Cysteine desulfurase; s 100.0 2.1E-28 7.3E-33 254.2 22.9 344 23-506 31-401 (423)
113 3isl_A Purine catabolism prote 100.0 1.7E-27 5.9E-32 246.5 29.1 327 55-505 46-391 (416)
114 1m32_A 2-aminoethylphosphonate 100.0 4.9E-28 1.7E-32 245.7 22.8 320 25-502 14-363 (366)
115 1b9h_A AHBA synthase, protein 100.0 7.1E-27 2.4E-31 240.2 29.7 305 21-413 9-323 (388)
116 2bkw_A Alanine-glyoxylate amin 100.0 1.5E-27 5.2E-32 244.1 24.3 339 22-503 12-383 (385)
117 3i4j_A Aminotransferase, class 100.0 2.6E-27 8.9E-32 247.1 25.3 352 27-504 47-428 (430)
118 3ruy_A Ornithine aminotransfer 100.0 1.1E-27 3.9E-32 246.5 22.0 312 27-501 54-391 (392)
119 4adb_A Succinylornithine trans 100.0 9.5E-28 3.3E-32 248.0 21.0 317 27-506 57-402 (406)
120 3f0h_A Aminotransferase; RER07 100.0 1.2E-26 4.1E-31 237.1 27.5 338 22-503 26-373 (376)
121 2dkj_A Serine hydroxymethyltra 100.0 2.8E-27 9.7E-32 244.3 22.5 335 22-503 31-387 (407)
122 3pj0_A LMO0305 protein; struct 100.0 8.2E-27 2.8E-31 236.9 24.3 303 48-500 43-358 (359)
123 2ez2_A Beta-tyrosinase, tyrosi 100.0 3.7E-26 1.3E-30 240.1 30.2 331 48-505 70-432 (456)
124 2ord_A Acoat, acetylornithine 100.0 5.4E-28 1.8E-32 249.5 15.6 195 27-265 58-273 (397)
125 3lws_A Aromatic amino acid bet 100.0 3.1E-27 1.1E-31 239.9 20.7 305 47-501 41-356 (357)
126 3vax_A Putative uncharacterize 100.0 6.6E-28 2.3E-32 248.5 15.9 342 23-503 29-399 (400)
127 1jg8_A L-ALLO-threonine aldola 100.0 9.3E-27 3.2E-31 235.4 23.9 207 27-269 17-228 (347)
128 2aeu_A Hypothetical protein MJ 99.9 1.2E-26 4.2E-31 238.0 24.0 200 22-277 38-242 (374)
129 2eh6_A Acoat, acetylornithine 99.9 2.7E-27 9.2E-32 241.9 19.0 306 26-500 45-374 (375)
130 1w23_A Phosphoserine aminotran 99.9 1.6E-27 5.6E-32 242.0 16.9 337 22-503 10-359 (360)
131 2oga_A Transaminase; PLP-depen 99.9 1.1E-26 3.8E-31 240.1 22.9 296 22-412 38-337 (399)
132 3mad_A Sphingosine-1-phosphate 99.9 3.7E-26 1.3E-30 244.2 27.7 349 28-506 110-471 (514)
133 1v72_A Aldolase; PLP-dependent 99.9 9E-27 3.1E-31 235.8 21.5 325 26-505 20-354 (356)
134 3gju_A Putative aminotransfera 99.9 3E-26 1E-30 241.4 26.3 346 27-506 69-458 (460)
135 1s0a_A Adenosylmethionine-8-am 99.9 1E-26 3.5E-31 242.6 22.2 326 26-504 60-424 (429)
136 1zod_A DGD, 2,2-dialkylglycine 99.9 9.8E-27 3.4E-31 242.9 22.0 210 27-266 61-295 (433)
137 1mdo_A ARNB aminotransferase; 99.9 8.1E-26 2.8E-30 232.4 28.2 363 22-506 14-388 (393)
138 1ax4_A Tryptophanase; tryptoph 99.9 8.3E-26 2.8E-30 238.1 28.3 355 28-504 55-441 (467)
139 1vef_A Acetylornithine/acetyl- 99.9 1E-26 3.4E-31 239.6 19.9 312 26-501 62-394 (395)
140 2eo5_A 419AA long hypothetical 99.9 1.3E-26 4.4E-31 241.3 20.8 323 27-503 61-417 (419)
141 4a6r_A Omega transaminase; tra 99.9 4.6E-26 1.6E-30 240.0 25.0 345 27-507 68-452 (459)
142 2c81_A Glutamine-2-deoxy-scyll 99.9 9.4E-26 3.2E-30 234.5 26.9 208 19-269 7-218 (418)
143 2rfv_A Methionine gamma-lyase; 99.9 1.3E-25 4.3E-30 232.2 27.6 212 19-277 25-249 (398)
144 4ffc_A 4-aminobutyrate aminotr 99.9 3.5E-26 1.2E-30 240.6 22.9 220 27-277 82-329 (453)
145 3a9z_A Selenocysteine lyase; P 99.9 3.3E-26 1.1E-30 238.6 22.5 345 24-505 28-429 (432)
146 3n5m_A Adenosylmethionine-8-am 99.9 7.1E-26 2.4E-30 238.0 24.7 212 27-266 67-308 (452)
147 2pb2_A Acetylornithine/succiny 99.9 2.8E-26 9.5E-31 238.9 21.3 317 27-505 75-419 (420)
148 2po3_A 4-dehydrase; external a 99.9 6.3E-25 2.2E-29 228.7 30.8 296 21-411 23-328 (424)
149 3nx3_A Acoat, acetylornithine 99.9 5.3E-26 1.8E-30 234.3 22.0 211 27-277 54-284 (395)
150 3l44_A Glutamate-1-semialdehyd 99.9 7.8E-26 2.7E-30 236.2 22.8 205 27-266 73-293 (434)
151 3n0l_A Serine hydroxymethyltra 99.9 4.8E-25 1.7E-29 228.3 28.3 302 22-415 33-346 (417)
152 3dxv_A Alpha-amino-epsilon-cap 99.9 4.6E-26 1.6E-30 238.4 19.9 212 26-267 60-294 (439)
153 3mc6_A Sphingosine-1-phosphate 99.9 1.2E-25 4.2E-30 239.0 22.8 349 27-506 77-439 (497)
154 3uwc_A Nucleotide-sugar aminot 99.9 5.6E-25 1.9E-29 224.6 25.7 350 22-503 14-370 (374)
155 2fnu_A Aminotransferase; prote 99.9 1.3E-24 4.4E-29 221.7 27.7 354 21-505 6-373 (375)
156 3dod_A Adenosylmethionine-8-am 99.9 3.2E-25 1.1E-29 232.8 23.1 212 27-266 62-304 (448)
157 3a8u_X Omega-amino acid--pyruv 99.9 3.6E-25 1.2E-29 232.3 22.8 212 27-267 68-313 (449)
158 2c0r_A PSAT, phosphoserine ami 99.9 1.6E-25 5.5E-30 227.9 19.5 319 22-504 11-361 (362)
159 3ecd_A Serine hydroxymethyltra 99.9 1.6E-24 5.6E-29 224.7 26.9 301 22-413 40-352 (425)
160 1ibj_A CBL, cystathionine beta 99.9 3.9E-25 1.4E-29 232.8 22.2 178 48-269 126-307 (464)
161 2vi8_A Serine hydroxymethyltra 99.9 8.4E-25 2.9E-29 225.6 23.7 339 22-504 31-387 (405)
162 1z7d_A Ornithine aminotransfer 99.9 1E-24 3.4E-29 228.1 24.4 321 26-508 82-433 (433)
163 3oks_A 4-aminobutyrate transam 99.9 3.9E-25 1.4E-29 232.4 21.2 224 27-277 79-331 (451)
164 1qz9_A Kynureninase; kynurenin 99.9 1E-24 3.5E-29 225.9 24.0 335 24-503 38-401 (416)
165 3i5t_A Aminotransferase; pyrid 99.9 6.4E-25 2.2E-29 232.3 22.7 340 27-507 72-457 (476)
166 3dr4_A Putative perosamine syn 99.9 1E-24 3.5E-29 224.4 23.6 299 21-413 29-338 (391)
167 1wyu_B Glycine dehydrogenase s 99.9 9.1E-25 3.1E-29 231.1 22.8 347 25-502 77-439 (474)
168 1rv3_A Serine hydroxymethyltra 99.9 1.5E-24 5.2E-29 229.8 24.2 335 22-503 52-430 (483)
169 3gbx_A Serine hydroxymethyltra 99.9 9.2E-25 3.1E-29 226.3 22.0 300 22-413 38-351 (420)
170 3hmu_A Aminotransferase, class 99.9 3E-24 1E-28 226.9 25.6 214 27-264 73-314 (472)
171 3e9k_A Kynureninase; kynurenin 99.9 8.9E-25 3.1E-29 230.4 21.0 350 27-504 80-461 (465)
172 3tfu_A Adenosylmethionine-8-am 99.9 1.5E-24 5.1E-29 228.3 22.2 211 26-265 92-326 (457)
173 3k28_A Glutamate-1-semialdehyd 99.9 6.9E-25 2.4E-29 228.8 19.5 206 26-266 70-291 (429)
174 1cs1_A CGS, protein (cystathio 99.9 4.2E-23 1.4E-27 212.2 31.2 173 52-270 51-228 (386)
175 2dgk_A GAD-beta, GADB, glutama 99.9 1.8E-23 6.1E-28 219.7 28.6 352 27-506 55-436 (452)
176 2oat_A Ornithine aminotransfer 99.9 3.9E-24 1.3E-28 224.1 23.3 316 26-503 93-438 (439)
177 2cy8_A D-phgat, D-phenylglycin 99.9 1.2E-24 4.1E-29 228.6 19.5 198 26-266 74-292 (453)
178 3fq8_A Glutamate-1-semialdehyd 99.9 1.6E-24 5.5E-29 225.7 20.3 199 27-266 70-290 (427)
179 3qhx_A Cystathionine gamma-syn 99.9 2.2E-23 7.7E-28 215.0 28.4 172 52-269 65-241 (392)
180 3frk_A QDTB; aminotransferase, 99.9 2.8E-24 9.5E-29 219.7 20.6 198 24-269 13-213 (373)
181 3h7f_A Serine hydroxymethyltra 99.9 2E-23 6.7E-28 219.1 26.9 294 22-410 53-366 (447)
182 3ndn_A O-succinylhomoserine su 99.9 3.1E-23 1E-27 215.5 28.0 167 55-268 83-255 (414)
183 2oqx_A Tryptophanase; lyase, p 99.9 8.8E-24 3E-28 222.6 24.1 351 28-505 53-443 (467)
184 2cb1_A O-acetyl homoserine sul 99.9 8.4E-23 2.9E-27 212.1 30.9 161 49-253 50-216 (412)
185 1o69_A Aminotransferase; struc 99.9 6.9E-23 2.4E-27 211.3 29.9 202 21-269 5-210 (394)
186 2epj_A Glutamate-1-semialdehyd 99.9 2.5E-24 8.4E-29 224.9 19.2 198 26-266 73-294 (434)
187 2fyf_A PSAT, phosphoserine ami 99.9 1.3E-23 4.4E-28 216.9 24.3 338 22-503 47-397 (398)
188 1gc0_A Methionine gamma-lyase; 99.9 5E-23 1.7E-27 212.8 28.3 172 51-269 63-240 (398)
189 3cog_A Cystathionine gamma-lya 99.9 2.1E-23 7.1E-28 216.1 24.7 177 46-269 61-242 (403)
190 1pff_A Methionine gamma-lyase; 99.9 1.3E-23 4.5E-28 211.1 22.5 167 57-270 2-175 (331)
191 1qgn_A Protein (cystathionine 99.9 3.6E-22 1.2E-26 208.9 32.2 170 53-269 114-289 (445)
192 1js3_A DDC;, DOPA decarboxylas 99.9 4.4E-23 1.5E-27 218.7 25.3 364 27-508 87-478 (486)
193 1n8p_A Cystathionine gamma-lya 99.9 3.2E-23 1.1E-27 213.9 23.4 170 52-269 54-232 (393)
194 2e7u_A Glutamate-1-semialdehyd 99.9 7E-24 2.4E-28 220.8 18.3 195 27-266 70-289 (424)
195 3nyt_A Aminotransferase WBPE; 99.9 7E-23 2.4E-27 209.0 24.9 198 24-269 12-212 (367)
196 4e77_A Glutamate-1-semialdehyd 99.9 1.2E-23 4.2E-28 219.3 19.6 204 27-266 71-291 (429)
197 3ke3_A Putative serine-pyruvat 99.9 2.6E-23 9E-28 213.3 21.7 321 56-505 34-377 (379)
198 3hbx_A GAD 1, glutamate decarb 99.9 2.2E-22 7.5E-27 214.2 28.9 355 24-506 66-446 (502)
199 2cjg_A L-lysine-epsilon aminot 99.9 1.2E-23 4E-28 221.0 18.5 326 27-504 72-448 (449)
200 3acz_A Methionine gamma-lyase; 99.9 4.9E-22 1.7E-26 204.8 29.6 176 46-269 53-234 (389)
201 3ju7_A Putative PLP-dependent 99.9 2.2E-22 7.5E-27 206.5 25.6 203 21-269 7-217 (377)
202 3ri6_A O-acetylhomoserine sulf 99.9 1.3E-21 4.4E-26 203.9 28.7 157 52-252 81-241 (430)
203 2okj_A Glutamate decarboxylase 99.9 1.5E-21 5.3E-26 207.9 29.7 283 48-374 123-424 (504)
204 3vp6_A Glutamate decarboxylase 99.9 1.7E-21 5.8E-26 207.8 29.5 299 29-373 111-426 (511)
205 2qma_A Diaminobutyrate-pyruvat 99.9 9.4E-22 3.2E-26 209.1 27.1 359 22-503 108-495 (497)
206 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 1.4E-21 4.8E-26 204.3 27.1 197 22-266 37-243 (437)
207 4e1o_A HDC, histidine decarbox 99.9 3E-21 1E-25 204.4 26.3 363 26-506 91-480 (481)
208 2z67_A O-phosphoseryl-tRNA(SEC 99.9 3.3E-21 1.1E-25 202.7 26.5 249 55-376 131-388 (456)
209 2fq6_A Cystathionine beta-lyas 99.9 3.6E-21 1.2E-25 199.8 26.0 176 46-269 76-258 (415)
210 3k40_A Aromatic-L-amino-acid d 99.9 1.2E-20 4E-25 199.6 28.4 358 29-506 89-473 (475)
211 3nmy_A Xometc, cystathionine g 99.9 1.3E-20 4.4E-25 194.8 25.9 178 45-269 60-243 (400)
212 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1.6E-20 5.6E-25 192.9 25.9 154 21-204 8-168 (390)
213 2a7v_A Serine hydroxymethyltra 99.9 4.1E-20 1.4E-24 195.0 27.0 302 22-416 62-400 (490)
214 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.1E-21 3.6E-26 205.9 12.0 166 49-252 53-223 (446)
215 2ctz_A O-acetyl-L-homoserine s 99.9 7.9E-20 2.7E-24 190.2 25.9 157 54-253 59-220 (421)
216 3i16_A Aluminum resistance pro 99.8 4.2E-19 1.4E-23 184.4 27.5 231 49-366 70-325 (427)
217 1wyu_A Glycine dehydrogenase ( 99.8 9.4E-20 3.2E-24 190.5 22.7 317 52-501 103-437 (438)
218 2jis_A Cysteine sulfinic acid 99.8 8.8E-19 3E-23 187.0 30.6 196 48-263 139-349 (515)
219 2yky_A Beta-transaminase; tran 99.7 1.1E-22 3.6E-27 213.6 0.0 199 27-266 118-323 (465)
220 3jzl_A Putative cystathionine 99.8 2.2E-19 7.7E-24 185.6 23.7 199 28-268 32-254 (409)
221 3hvy_A Cystathionine beta-lyas 99.8 8.3E-19 2.8E-23 182.1 26.6 199 28-268 47-271 (427)
222 3ht4_A Aluminum resistance pro 99.8 1.5E-19 5.1E-24 188.4 20.8 181 59-269 67-261 (431)
223 1c4k_A Protein (ornithine deca 99.8 3.2E-19 1.1E-23 196.3 23.3 179 51-251 171-366 (730)
224 1ohv_A 4-aminobutyrate aminotr 99.8 1.2E-19 4.3E-24 191.5 17.4 178 26-207 80-308 (472)
225 2vyc_A Biodegradative arginine 99.8 5.7E-18 1.9E-22 187.8 26.2 177 53-252 205-398 (755)
226 4ao9_A Beta-phenylalanine amin 99.8 8.2E-18 2.8E-22 175.4 18.3 199 27-266 105-310 (454)
227 3e77_A Phosphoserine aminotran 99.8 1.4E-17 4.7E-22 170.0 18.3 332 22-503 20-374 (377)
228 3m5u_A Phosphoserine aminotran 99.7 6.6E-17 2.3E-21 164.2 20.1 329 22-503 12-359 (361)
229 3qm2_A Phosphoserine aminotran 99.7 2.9E-17 1E-21 168.3 15.2 329 22-503 34-384 (386)
230 3n75_A LDC, lysine decarboxyla 99.7 1.8E-16 6.2E-21 173.2 20.7 178 50-253 192-380 (715)
231 4atq_A 4-aminobutyrate transam 99.7 1.8E-15 6.3E-20 158.1 20.3 230 27-281 82-334 (456)
232 4e3q_A Pyruvate transaminase; 99.7 1.9E-15 6.6E-20 158.6 18.2 217 27-267 85-330 (473)
233 4a0g_A Adenosylmethionine-8-am 99.6 9.6E-15 3.3E-19 163.2 14.0 217 27-266 399-688 (831)
234 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 2.5E-13 8.5E-18 140.4 18.8 188 55-266 96-290 (450)
235 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 8.7E-12 3E-16 127.5 29.1 190 57-266 116-308 (501)
236 3ou5_A Serine hydroxymethyltra 99.3 8.8E-10 3E-14 112.3 25.0 296 22-410 62-394 (490)
237 4fgs_A Probable dehydrogenase 88.3 3.9 0.00014 38.8 11.6 103 75-186 28-133 (273)
238 3rwb_A TPLDH, pyridoxal 4-dehy 82.5 12 0.00041 34.4 11.7 101 76-185 6-109 (247)
239 4dqx_A Probable oxidoreductase 79.6 18 0.00062 33.9 12.1 103 74-185 25-130 (277)
240 4g81_D Putative hexonate dehyd 79.1 21 0.00073 33.2 12.2 104 74-186 7-116 (255)
241 3tpc_A Short chain alcohol deh 76.4 17 0.0006 33.4 10.8 102 75-185 6-114 (257)
242 3gvc_A Oxidoreductase, probabl 76.2 16 0.00056 34.2 10.6 101 77-186 30-133 (277)
243 4eso_A Putative oxidoreductase 75.9 22 0.00074 32.8 11.3 102 75-185 7-111 (255)
244 3grp_A 3-oxoacyl-(acyl carrier 75.5 20 0.00068 33.4 11.0 102 75-185 26-130 (266)
245 3ged_A Short-chain dehydrogena 75.5 23 0.00078 32.9 11.2 99 78-186 4-105 (247)
246 4e6p_A Probable sorbitol dehyd 75.4 25 0.00084 32.4 11.5 102 75-185 7-111 (259)
247 3l6e_A Oxidoreductase, short-c 75.1 21 0.00071 32.5 10.8 100 78-186 5-107 (235)
248 3ppi_A 3-hydroxyacyl-COA dehyd 75.0 24 0.00081 32.9 11.4 100 77-185 31-138 (281)
249 3h7a_A Short chain dehydrogena 74.0 43 0.0015 30.7 12.8 102 75-185 6-112 (252)
250 3pxx_A Carveol dehydrogenase; 73.8 19 0.00066 33.6 10.5 101 76-185 10-126 (287)
251 3n74_A 3-ketoacyl-(acyl-carrie 73.7 34 0.0012 31.3 12.1 102 75-185 8-113 (261)
252 2gjx_A Beta-hexosaminidase alp 73.4 11 0.00039 39.0 9.3 111 74-197 98-234 (507)
253 2ew8_A (S)-1-phenylethanol deh 72.3 49 0.0017 30.1 12.7 101 76-185 7-111 (249)
254 3tzq_B Short-chain type dehydr 72.3 32 0.0011 31.9 11.6 102 75-185 10-116 (271)
255 3gem_A Short chain dehydrogena 71.8 25 0.00086 32.5 10.6 100 75-185 26-127 (260)
256 3op4_A 3-oxoacyl-[acyl-carrier 71.7 30 0.001 31.7 11.1 102 75-185 8-112 (248)
257 4fn4_A Short chain dehydrogena 71.3 35 0.0012 31.7 11.4 100 77-186 8-115 (254)
258 4gkb_A 3-oxoacyl-[acyl-carrier 71.2 58 0.002 30.2 12.9 104 74-186 5-112 (258)
259 2o23_A HADH2 protein; HSD17B10 71.0 49 0.0017 30.2 12.5 81 76-165 12-93 (265)
260 3gh5_A HEX1, beta-hexosaminida 71.0 12 0.0004 39.1 8.6 117 72-197 126-275 (525)
261 3gaf_A 7-alpha-hydroxysteroid 70.6 41 0.0014 30.8 11.8 103 74-185 10-117 (256)
262 3sc4_A Short chain dehydrogena 70.6 62 0.0021 30.1 13.3 102 75-185 8-122 (285)
263 3t7c_A Carveol dehydrogenase; 70.4 56 0.0019 30.7 13.0 103 74-185 26-147 (299)
264 3tfo_A Putative 3-oxoacyl-(acy 69.7 52 0.0018 30.5 12.3 100 78-186 6-111 (264)
265 3lyl_A 3-oxoacyl-(acyl-carrier 69.7 51 0.0017 29.8 12.2 101 76-185 5-111 (247)
266 3rih_A Short chain dehydrogena 69.6 55 0.0019 30.9 12.7 103 75-186 40-149 (293)
267 4fc7_A Peroxisomal 2,4-dienoyl 69.4 51 0.0017 30.6 12.3 101 76-185 27-134 (277)
268 1hxh_A 3BETA/17BETA-hydroxyste 69.2 49 0.0017 30.2 12.0 100 77-185 7-109 (253)
269 1vl8_A Gluconate 5-dehydrogena 68.6 56 0.0019 30.2 12.3 102 75-185 20-128 (267)
270 4ibo_A Gluconate dehydrogenase 68.4 46 0.0016 30.9 11.7 103 74-185 24-132 (271)
271 2yvq_A Carbamoyl-phosphate syn 68.3 52 0.0018 27.5 11.0 111 71-197 19-131 (143)
272 3m1a_A Putative dehydrogenase; 68.1 28 0.00095 32.4 10.2 100 77-185 6-108 (281)
273 3e03_A Short chain dehydrogena 67.6 71 0.0024 29.5 12.9 102 75-185 5-119 (274)
274 1hdc_A 3-alpha, 20 beta-hydrox 67.4 52 0.0018 30.0 11.8 100 77-185 6-108 (254)
275 3sju_A Keto reductase; short-c 67.2 49 0.0017 30.8 11.7 100 77-185 25-130 (279)
276 4dyv_A Short-chain dehydrogena 66.9 39 0.0013 31.4 10.9 100 77-185 29-132 (272)
277 3uve_A Carveol dehydrogenase ( 66.7 64 0.0022 29.9 12.5 102 75-185 10-134 (286)
278 1jak_A Beta-N-acetylhexosamini 66.3 15 0.00053 38.1 8.4 70 119-197 181-250 (512)
279 3sx2_A Putative 3-ketoacyl-(ac 66.1 65 0.0022 29.7 12.3 100 75-185 12-127 (278)
280 3kvo_A Hydroxysteroid dehydrog 66.0 88 0.003 30.3 13.6 101 76-185 45-158 (346)
281 2jah_A Clavulanic acid dehydro 65.7 71 0.0024 28.9 12.3 101 76-185 7-113 (247)
282 3tsc_A Putative oxidoreductase 65.4 43 0.0015 31.0 10.9 102 75-185 10-130 (277)
283 4dmm_A 3-oxoacyl-[acyl-carrier 65.1 39 0.0013 31.3 10.5 103 74-185 26-135 (269)
284 3s55_A Putative short-chain de 65.0 78 0.0027 29.2 12.7 102 75-185 9-128 (281)
285 4iin_A 3-ketoacyl-acyl carrier 65.0 42 0.0014 31.0 10.7 104 73-185 26-136 (271)
286 3rkr_A Short chain oxidoreduct 65.0 75 0.0026 29.0 12.4 101 76-185 29-136 (262)
287 3edm_A Short chain dehydrogena 64.6 85 0.0029 28.7 12.8 102 75-185 7-116 (259)
288 1uls_A Putative 3-oxoacyl-acyl 64.5 64 0.0022 29.2 11.7 99 77-186 6-107 (245)
289 3ksu_A 3-oxoacyl-acyl carrier 64.3 54 0.0019 30.1 11.3 102 75-185 10-120 (262)
290 3rd5_A Mypaa.01249.C; ssgcid, 63.9 28 0.00097 32.6 9.3 77 75-163 15-91 (291)
291 1now_A Beta-hexosaminidase bet 63.8 23 0.00078 36.7 9.1 109 73-196 103-238 (507)
292 3zu3_A Putative reductase YPO4 63.5 1.2E+02 0.0041 30.2 13.9 103 52-163 23-142 (405)
293 3nyw_A Putative oxidoreductase 63.5 49 0.0017 30.2 10.7 101 76-185 7-115 (250)
294 3is3_A 17BETA-hydroxysteroid d 63.5 38 0.0013 31.3 10.1 102 75-185 17-125 (270)
295 3guy_A Short-chain dehydrogena 63.5 38 0.0013 30.4 9.8 98 78-186 3-102 (230)
296 3ai3_A NADPH-sorbose reductase 63.3 88 0.003 28.5 12.6 102 75-185 6-114 (263)
297 3tjr_A Short chain dehydrogena 63.3 70 0.0024 30.1 12.1 102 75-185 30-137 (301)
298 3r1i_A Short-chain type dehydr 63.3 74 0.0025 29.5 12.1 103 74-185 30-138 (276)
299 3ijr_A Oxidoreductase, short c 62.7 91 0.0031 29.1 12.7 102 75-185 46-155 (291)
300 3lf2_A Short chain oxidoreduct 62.7 86 0.0029 28.7 12.4 104 74-186 6-117 (265)
301 3v2g_A 3-oxoacyl-[acyl-carrier 62.7 54 0.0019 30.4 11.0 103 74-185 29-138 (271)
302 3ucx_A Short chain dehydrogena 62.6 67 0.0023 29.5 11.6 102 75-185 10-118 (264)
303 3qlj_A Short chain dehydrogena 62.6 55 0.0019 31.2 11.3 102 76-186 27-144 (322)
304 3v2h_A D-beta-hydroxybutyrate 62.2 85 0.0029 29.1 12.4 102 75-185 24-133 (281)
305 2a4k_A 3-oxoacyl-[acyl carrier 62.1 58 0.002 30.0 11.0 101 76-185 6-109 (263)
306 3qiv_A Short-chain dehydrogena 62.1 72 0.0025 28.9 11.6 102 75-185 8-118 (253)
307 3oid_A Enoyl-[acyl-carrier-pro 62.0 76 0.0026 29.0 11.8 99 78-185 6-111 (258)
308 3imf_A Short chain dehydrogena 61.6 80 0.0027 28.8 11.9 101 77-186 7-113 (257)
309 4imr_A 3-oxoacyl-(acyl-carrier 61.6 65 0.0022 29.9 11.3 102 75-185 32-138 (275)
310 1nff_A Putative oxidoreductase 61.5 80 0.0028 28.9 11.9 101 76-185 7-110 (260)
311 1x1t_A D(-)-3-hydroxybutyrate 61.5 88 0.003 28.5 12.2 100 77-185 5-112 (260)
312 4egf_A L-xylulose reductase; s 61.4 69 0.0024 29.4 11.4 102 75-185 19-127 (266)
313 3pgx_A Carveol dehydrogenase; 61.3 56 0.0019 30.3 10.8 102 75-185 14-134 (280)
314 3oec_A Carveol dehydrogenase ( 61.2 84 0.0029 29.8 12.3 101 76-185 46-164 (317)
315 3l77_A Short-chain alcohol deh 60.3 49 0.0017 29.6 10.0 99 78-185 4-109 (235)
316 1geg_A Acetoin reductase; SDR 60.3 79 0.0027 28.7 11.6 99 78-185 4-108 (256)
317 3ozo_A N-acetylglucosaminidase 60.2 56 0.0019 34.3 11.3 106 78-197 142-275 (572)
318 1iy8_A Levodione reductase; ox 60.2 94 0.0032 28.4 12.2 101 76-185 13-122 (267)
319 3zv4_A CIS-2,3-dihydrobiphenyl 60.0 59 0.002 30.3 10.7 79 76-163 5-84 (281)
320 3ak4_A NADH-dependent quinucli 59.4 87 0.003 28.5 11.7 101 76-185 12-115 (263)
321 3o38_A Short chain dehydrogena 59.2 74 0.0025 29.1 11.2 101 76-185 22-130 (266)
322 3a28_C L-2.3-butanediol dehydr 58.8 80 0.0027 28.7 11.3 99 78-185 4-110 (258)
323 2rhc_B Actinorhodin polyketide 58.6 95 0.0032 28.7 12.0 100 77-185 23-128 (277)
324 3r3s_A Oxidoreductase; structu 57.9 97 0.0033 29.0 12.0 103 75-186 48-159 (294)
325 3v8b_A Putative dehydrogenase, 57.8 1E+02 0.0035 28.6 12.1 101 76-185 28-135 (283)
326 1w6u_A 2,4-dienoyl-COA reducta 57.7 1E+02 0.0036 28.6 12.2 100 77-185 27-133 (302)
327 3eb2_A Putative dihydrodipicol 57.6 88 0.003 29.7 11.6 84 83-198 83-166 (300)
328 2cfc_A 2-(R)-hydroxypropyl-COM 57.1 81 0.0028 28.3 11.0 99 78-185 4-112 (250)
329 3fkr_A L-2-keto-3-deoxyarabona 57.1 1.1E+02 0.0038 29.2 12.2 92 79-200 80-175 (309)
330 1o5k_A DHDPS, dihydrodipicolin 56.9 74 0.0025 30.3 10.9 90 79-199 84-176 (306)
331 3ftp_A 3-oxoacyl-[acyl-carrier 56.8 87 0.003 28.9 11.3 102 75-185 27-134 (270)
332 2uvd_A 3-oxoacyl-(acyl-carrier 56.2 1.1E+02 0.0037 27.6 11.6 100 77-185 5-111 (246)
333 1zem_A Xylitol dehydrogenase; 56.0 1.2E+02 0.0041 27.6 12.2 101 76-185 7-114 (262)
334 1xky_A Dihydrodipicolinate syn 55.9 72 0.0025 30.3 10.6 89 79-199 84-175 (301)
335 3osu_A 3-oxoacyl-[acyl-carrier 55.8 1.2E+02 0.004 27.4 12.5 100 77-185 5-111 (246)
336 2wsb_A Galactitol dehydrogenas 55.7 1.1E+02 0.0038 27.4 11.7 102 75-185 10-114 (254)
337 1fmc_A 7 alpha-hydroxysteroid 55.7 1.1E+02 0.0039 27.3 12.3 102 75-185 10-116 (255)
338 3pk0_A Short-chain dehydrogena 55.7 92 0.0032 28.5 11.2 102 75-185 9-117 (262)
339 3ezl_A Acetoacetyl-COA reducta 55.6 70 0.0024 29.0 10.3 100 77-185 14-120 (256)
340 2yxg_A DHDPS, dihydrodipicolin 55.6 62 0.0021 30.6 10.1 88 79-197 72-162 (289)
341 2c07_A 3-oxoacyl-(acyl-carrier 54.9 1.3E+02 0.0045 27.7 12.7 100 77-185 45-150 (285)
342 1yb1_A 17-beta-hydroxysteroid 54.8 1.1E+02 0.0038 28.0 11.7 83 74-165 29-115 (272)
343 2vc6_A MOSA, dihydrodipicolina 54.7 57 0.0019 30.9 9.6 87 79-197 72-162 (292)
344 3tox_A Short chain dehydrogena 54.4 1.2E+02 0.0041 28.1 11.9 101 76-185 8-115 (280)
345 1zk4_A R-specific alcohol dehy 54.2 1.2E+02 0.0041 27.1 11.7 100 77-185 7-111 (251)
346 2pnf_A 3-oxoacyl-[acyl-carrier 54.1 1.2E+02 0.0041 27.0 12.0 102 75-185 6-114 (248)
347 3gdg_A Probable NADP-dependent 53.8 77 0.0026 28.9 10.3 102 75-185 19-130 (267)
348 3u5t_A 3-oxoacyl-[acyl-carrier 53.4 79 0.0027 29.2 10.3 100 77-185 28-134 (267)
349 2rfg_A Dihydrodipicolinate syn 53.0 51 0.0017 31.4 9.0 88 79-198 72-162 (297)
350 2ehh_A DHDPS, dihydrodipicolin 53.0 79 0.0027 29.9 10.3 88 79-197 72-162 (294)
351 3f9i_A 3-oxoacyl-[acyl-carrier 53.0 69 0.0024 28.9 9.8 78 75-164 13-90 (249)
352 3awd_A GOX2181, putative polyo 52.4 1.3E+02 0.0045 27.0 12.4 102 75-185 12-120 (260)
353 3svt_A Short-chain type dehydr 52.4 1.4E+02 0.0047 27.5 12.0 104 74-186 9-122 (281)
354 3cxt_A Dehydrogenase with diff 52.2 1.2E+02 0.004 28.3 11.5 103 74-185 32-140 (291)
355 4hp8_A 2-deoxy-D-gluconate 3-d 50.9 48 0.0016 30.7 8.1 100 74-186 7-109 (247)
356 2ojp_A DHDPS, dihydrodipicolin 50.9 60 0.0021 30.7 9.1 87 79-197 73-162 (292)
357 2r8w_A AGR_C_1641P; APC7498, d 50.3 59 0.002 31.5 9.0 54 142-199 144-197 (332)
358 2q2v_A Beta-D-hydroxybutyrate 50.0 1.5E+02 0.005 26.8 12.3 100 77-185 5-108 (255)
359 1xkq_A Short-chain reductase f 49.9 1.4E+02 0.0047 27.5 11.5 100 77-185 7-119 (280)
360 3uf0_A Short-chain dehydrogena 49.5 1.6E+02 0.0054 27.1 13.1 102 74-185 29-135 (273)
361 1xhl_A Short-chain dehydrogena 49.2 1.4E+02 0.0048 27.8 11.6 100 77-185 27-137 (297)
362 2b4q_A Rhamnolipids biosynthes 48.0 1.5E+02 0.0053 27.2 11.5 101 75-185 28-134 (276)
363 2hmc_A AGR_L_411P, dihydrodipi 47.9 71 0.0024 31.1 9.2 89 79-198 95-187 (344)
364 3u9l_A 3-oxoacyl-[acyl-carrier 47.8 1.5E+02 0.005 28.3 11.5 100 77-185 6-116 (324)
365 2x9g_A PTR1, pteridine reducta 47.6 1.3E+02 0.0045 27.8 11.0 80 77-165 24-113 (288)
366 1ae1_A Tropinone reductase-I; 47.4 1.7E+02 0.0058 26.8 12.5 102 75-185 20-128 (273)
367 4b79_A PA4098, probable short- 47.3 79 0.0027 29.1 9.0 94 77-186 12-106 (242)
368 2wkj_A N-acetylneuraminate lya 47.1 68 0.0023 30.5 8.8 90 78-199 82-175 (303)
369 1spx_A Short-chain reductase f 47.0 1.1E+02 0.0038 28.0 10.3 79 77-164 7-92 (278)
370 3i1j_A Oxidoreductase, short c 46.9 1.6E+02 0.0054 26.3 12.0 102 77-185 15-124 (247)
371 2ae2_A Protein (tropinone redu 46.7 1.7E+02 0.0057 26.5 12.7 102 75-185 8-116 (260)
372 3rjz_A N-type ATP pyrophosphat 46.6 1.4E+02 0.0046 27.4 10.4 101 78-196 7-121 (237)
373 3a5f_A Dihydrodipicolinate syn 46.5 59 0.002 30.8 8.2 88 79-198 73-163 (291)
374 3asu_A Short-chain dehydrogena 46.4 95 0.0033 28.1 9.6 98 79-185 3-104 (248)
375 2z1n_A Dehydrogenase; reductas 46.3 1.7E+02 0.0058 26.5 12.9 101 76-185 7-114 (260)
376 2v9d_A YAGE; dihydrodipicolini 46.1 1.1E+02 0.0037 29.8 10.2 53 142-197 141-193 (343)
377 3kzv_A Uncharacterized oxidore 45.7 1.4E+02 0.0049 26.9 10.7 101 78-185 4-108 (254)
378 1h5q_A NADP-dependent mannitol 45.6 1.7E+02 0.0058 26.3 11.5 100 77-185 15-121 (265)
379 3gk3_A Acetoacetyl-COA reducta 45.2 1.8E+02 0.0062 26.5 11.4 99 78-185 27-132 (269)
380 1c7s_A Beta-N-acetylhexosamini 45.0 29 0.001 38.3 6.4 124 74-197 266-419 (858)
381 3tl3_A Short-chain type dehydr 44.5 47 0.0016 30.3 7.1 97 77-185 10-112 (257)
382 3t4x_A Oxidoreductase, short c 44.4 1.9E+02 0.0063 26.4 12.4 99 75-185 9-114 (267)
383 1f6k_A N-acetylneuraminate lya 44.3 65 0.0022 30.5 8.1 88 79-198 76-166 (293)
384 3cpr_A Dihydrodipicolinate syn 44.2 1.2E+02 0.0041 28.8 10.1 88 79-198 88-178 (304)
385 3mfq_A TROA, high-affinity zin 44.2 2E+02 0.0069 26.8 14.7 78 106-196 165-243 (282)
386 1yxm_A Pecra, peroxisomal tran 43.9 2E+02 0.0068 26.6 12.1 101 76-185 18-129 (303)
387 1pq4_A Periplasmic binding pro 43.7 2.1E+02 0.0072 26.8 14.0 75 105-196 191-265 (291)
388 3f1l_A Uncharacterized oxidore 43.6 1.8E+02 0.0063 26.1 12.0 103 76-185 12-122 (252)
389 1ja9_A 4HNR, 1,3,6,8-tetrahydr 43.6 1.9E+02 0.0063 26.2 11.2 100 77-185 22-128 (274)
390 2ehd_A Oxidoreductase, oxidore 43.2 1.7E+02 0.0058 25.8 10.7 97 78-185 7-107 (234)
391 3dii_A Short-chain dehydrogena 42.9 1.9E+02 0.0064 26.0 11.5 98 78-185 4-104 (247)
392 3na8_A Putative dihydrodipicol 42.5 1.3E+02 0.0045 28.7 10.1 89 79-198 96-187 (315)
393 4e3z_A Putative oxidoreductase 42.5 2E+02 0.0068 26.2 12.2 99 78-185 28-134 (272)
394 3qfe_A Putative dihydrodipicol 42.1 1.6E+02 0.0054 28.2 10.6 92 79-198 83-177 (318)
395 3si9_A DHDPS, dihydrodipicolin 41.9 85 0.0029 30.1 8.6 89 79-198 94-185 (315)
396 3afn_B Carbonyl reductase; alp 41.8 1.9E+02 0.0065 25.8 12.0 100 77-185 8-115 (258)
397 3b4u_A Dihydrodipicolinate syn 41.8 82 0.0028 29.8 8.4 90 78-197 74-170 (294)
398 3ioy_A Short-chain dehydrogena 41.7 1.5E+02 0.005 28.1 10.4 102 76-186 8-117 (319)
399 1iv0_A Hypothetical protein; r 41.5 57 0.0019 25.4 6.0 58 140-201 37-96 (98)
400 4dry_A 3-oxoacyl-[acyl-carrier 40.8 2.1E+02 0.0072 26.3 11.2 100 77-185 34-141 (281)
401 4da9_A Short-chain dehydrogena 40.8 1.6E+02 0.0054 27.2 10.3 102 75-185 28-138 (280)
402 2bgk_A Rhizome secoisolaricire 40.3 2.1E+02 0.0072 25.9 12.1 101 76-185 16-123 (278)
403 3m5v_A DHDPS, dihydrodipicolin 40.3 70 0.0024 30.4 7.7 89 78-198 79-171 (301)
404 3qp9_A Type I polyketide synth 39.7 2E+02 0.0068 29.6 11.6 103 75-185 249-371 (525)
405 1mxh_A Pteridine reductase 2; 39.3 1.8E+02 0.0061 26.5 10.4 80 77-165 12-101 (276)
406 1edo_A Beta-keto acyl carrier 39.2 2E+02 0.0069 25.4 12.0 99 78-185 3-108 (244)
407 3ecs_A Translation initiation 39.1 1.8E+02 0.0062 27.8 10.3 106 74-197 119-229 (315)
408 3qze_A DHDPS, dihydrodipicolin 39.0 79 0.0027 30.3 7.9 88 78-197 94-184 (314)
409 4iiu_A 3-oxoacyl-[acyl-carrier 38.9 2.2E+02 0.0076 25.7 12.2 100 77-185 27-133 (267)
410 2qq5_A DHRS1, dehydrogenase/re 38.9 2.2E+02 0.0075 25.7 11.0 79 77-164 6-89 (260)
411 3flu_A DHDPS, dihydrodipicolin 38.9 1.5E+02 0.0053 27.9 9.9 89 78-198 78-169 (297)
412 1y80_A Predicted cobalamin bin 38.8 1.1E+02 0.0036 27.2 8.3 64 118-196 109-176 (210)
413 3daq_A DHDPS, dihydrodipicolin 38.4 1.2E+02 0.0042 28.5 9.1 88 78-197 73-163 (292)
414 2hq1_A Glucose/ribitol dehydro 38.3 1.9E+02 0.0066 25.6 10.3 79 77-164 6-89 (247)
415 3ek2_A Enoyl-(acyl-carrier-pro 38.3 1.5E+02 0.0053 26.7 9.7 102 74-185 12-126 (271)
416 3i6i_A Putative leucoanthocyan 38.2 74 0.0025 30.4 7.7 98 77-196 11-116 (346)
417 3h5d_A DHDPS, dihydrodipicolin 38.2 97 0.0033 29.6 8.4 90 78-199 78-171 (311)
418 3i4f_A 3-oxoacyl-[acyl-carrier 38.1 1.9E+02 0.0066 26.0 10.3 100 77-185 8-116 (264)
419 1vhx_A Putative holliday junct 37.7 44 0.0015 28.3 5.1 60 139-202 40-102 (150)
420 2ph3_A 3-oxoacyl-[acyl carrier 37.4 2.2E+02 0.0074 25.2 11.1 99 78-185 3-109 (245)
421 3rku_A Oxidoreductase YMR226C; 37.2 2.4E+02 0.0081 26.1 10.9 104 77-186 34-146 (287)
422 1gee_A Glucose 1-dehydrogenase 37.0 2.3E+02 0.0079 25.3 11.6 100 77-185 8-114 (261)
423 2zat_A Dehydrogenase/reductase 36.8 2.3E+02 0.008 25.4 12.1 101 76-185 14-121 (260)
424 2pd6_A Estradiol 17-beta-dehyd 36.6 2.3E+02 0.008 25.3 11.6 101 76-185 7-121 (264)
425 2h7i_A Enoyl-[acyl-carrier-pro 36.5 2.2E+02 0.0074 25.9 10.5 68 77-153 8-78 (269)
426 2d1y_A Hypothetical protein TT 36.2 2.4E+02 0.0082 25.3 12.2 97 77-185 7-106 (256)
427 1g0o_A Trihydroxynaphthalene r 36.2 2.5E+02 0.0087 25.6 12.4 100 77-185 30-136 (283)
428 3tsm_A IGPS, indole-3-glycerol 35.7 2.2E+02 0.0076 26.6 10.2 48 139-197 128-175 (272)
429 1bqc_A Protein (beta-mannanase 35.3 84 0.0029 29.5 7.4 21 177-197 64-84 (302)
430 1xq1_A Putative tropinone redu 35.3 2.5E+02 0.0085 25.2 11.8 102 75-185 13-121 (266)
431 2dtx_A Glucose 1-dehydrogenase 35.1 2.1E+02 0.0073 26.0 10.1 92 77-185 9-103 (264)
432 1oaa_A Sepiapterin reductase; 34.9 2.5E+02 0.0086 25.2 12.4 100 77-185 7-124 (259)
433 3icc_A Putative 3-oxoacyl-(acy 34.8 2.5E+02 0.0084 25.0 10.6 100 77-185 8-120 (255)
434 2nuw_A 2-keto-3-deoxygluconate 34.6 2E+02 0.0069 26.9 9.9 102 56-198 51-155 (288)
435 2nwq_A Probable short-chain de 34.6 2.1E+02 0.007 26.3 10.0 100 77-185 22-127 (272)
436 3s8m_A Enoyl-ACP reductase; ro 34.0 3.7E+02 0.013 26.8 14.2 78 77-163 62-157 (422)
437 3ctm_A Carbonyl reductase; alc 33.8 1.7E+02 0.0059 26.6 9.3 82 75-165 33-118 (279)
438 1wma_A Carbonyl reductase [NAD 32.9 2.7E+02 0.0092 24.9 10.7 79 78-165 6-89 (276)
439 3nrc_A Enoyl-[acyl-carrier-pro 32.8 2.9E+02 0.0099 25.2 10.9 101 76-185 26-137 (280)
440 3mje_A AMPHB; rossmann fold, o 32.7 4E+02 0.014 27.1 12.5 100 78-185 241-349 (496)
441 3ic5_A Putative saccharopine d 32.0 1.7E+02 0.0057 22.3 8.7 90 78-195 7-97 (118)
442 1xg5_A ARPG836; short chain de 31.5 3E+02 0.01 25.0 12.4 100 77-185 33-140 (279)
443 1vb5_A Translation initiation 31.4 3.2E+02 0.011 25.4 10.6 105 74-196 107-216 (276)
444 1e7w_A Pteridine reductase; di 31.2 3E+02 0.01 25.4 10.6 54 77-134 10-68 (291)
445 1hjs_A Beta-1,4-galactanase; 4 30.4 1.4E+02 0.0047 28.8 8.1 47 158-204 40-86 (332)
446 2r91_A 2-keto-3-deoxy-(6-phosp 30.0 3.4E+02 0.012 25.2 10.9 102 57-198 51-155 (286)
447 3p19_A BFPVVD8, putative blue 29.9 3.2E+02 0.011 24.8 11.8 97 76-185 16-116 (266)
448 3un1_A Probable oxidoreductase 29.8 3.1E+02 0.011 24.7 10.3 95 76-185 28-125 (260)
449 3auf_A Glycinamide ribonucleot 29.3 3.2E+02 0.011 24.6 10.0 90 79-181 26-120 (229)
450 1yht_A DSPB; beta barrel, hydr 29.0 47 0.0016 32.8 4.4 76 118-197 39-114 (367)
451 2yl5_A Beta-N-acetylhexosamini 28.6 44 0.0015 33.8 4.3 70 118-197 31-114 (442)
452 1pjq_A CYSG, siroheme synthase 28.5 1.8E+02 0.006 29.4 8.8 95 74-199 10-106 (457)
453 3tak_A DHDPS, dihydrodipicolin 28.3 1E+02 0.0036 29.0 6.7 89 78-198 72-163 (291)
454 3hh8_A Metal ABC transporter s 28.1 3.8E+02 0.013 25.1 11.5 75 105-195 184-259 (294)
455 3d0c_A Dihydrodipicolinate syn 28.0 3.5E+02 0.012 25.6 10.5 84 79-198 84-169 (314)
456 1yo6_A Putative carbonyl reduc 27.9 3.1E+02 0.011 24.0 11.2 98 78-185 5-111 (250)
457 2nu8_A Succinyl-COA ligase [AD 27.5 73 0.0025 30.1 5.4 75 112-201 51-125 (288)
458 1w3i_A EDA, 2-keto-3-deoxy glu 27.5 3.8E+02 0.013 25.0 10.5 103 56-198 51-156 (293)
459 2qhx_A Pteridine reductase 1; 27.5 3.6E+02 0.012 25.4 10.6 54 77-134 47-105 (328)
460 1tqj_A Ribulose-phosphate 3-ep 27.5 3.4E+02 0.011 24.3 11.6 7 191-197 173-179 (230)
461 1xp8_A RECA protein, recombina 27.4 2.2E+02 0.0076 27.7 9.1 16 401-416 293-308 (366)
462 1qwg_A PSL synthase;, (2R)-pho 27.3 3.7E+02 0.013 24.7 12.0 143 23-199 20-169 (251)
463 2o1e_A YCDH; alpha-beta protei 27.0 4E+02 0.014 25.1 12.7 76 105-195 191-266 (312)
464 3l23_A Sugar phosphate isomera 26.8 1.9E+02 0.0064 27.0 8.3 79 114-196 31-126 (303)
465 3l21_A DHDPS, dihydrodipicolin 26.6 2E+02 0.0068 27.2 8.3 89 78-198 86-177 (304)
466 2yl6_A Beta-N-acetylhexosamini 26.0 42 0.0014 33.9 3.5 70 118-197 28-111 (434)
467 2ekp_A 2-deoxy-D-gluconate 3-d 25.8 3.4E+02 0.012 23.9 10.1 94 78-185 4-99 (239)
468 1yde_A Retinal dehydrogenase/r 25.4 3.8E+02 0.013 24.3 12.9 101 75-185 8-112 (270)
469 2yv2_A Succinyl-COA synthetase 25.1 92 0.0031 29.5 5.6 76 112-202 57-133 (297)
470 3av3_A Phosphoribosylglycinami 24.6 3.7E+02 0.013 23.8 9.9 88 80-181 8-101 (212)
471 3oig_A Enoyl-[acyl-carrier-pro 24.3 3.9E+02 0.013 23.9 11.0 82 75-165 6-94 (266)
472 1fob_A Beta-1,4-galactanase; B 24.3 2E+02 0.0068 27.6 8.0 47 158-204 40-86 (334)
473 4gqr_A Pancreatic alpha-amylas 24.0 50 0.0017 33.3 3.7 29 176-204 75-103 (496)
474 2fr1_A Erythromycin synthase, 23.9 5E+02 0.017 26.2 11.4 100 78-185 228-335 (486)
475 4eue_A Putative reductase CA_C 23.7 5.4E+02 0.019 25.4 15.3 76 78-163 62-156 (418)
476 2yv1_A Succinyl-COA ligase [AD 23.7 69 0.0024 30.4 4.4 76 112-202 57-132 (294)
477 1xu9_A Corticosteroid 11-beta- 23.6 4.2E+02 0.014 24.1 12.0 100 77-185 29-135 (286)
478 3vtz_A Glucose 1-dehydrogenase 23.4 4.2E+02 0.014 24.0 10.8 95 75-185 13-110 (269)
479 2gjh_A Designed protein; oblig 23.3 1.3E+02 0.0044 20.1 4.2 26 478-503 3-29 (62)
480 3r6d_A NAD-dependent epimerase 23.3 3.2E+02 0.011 23.6 8.8 72 78-165 7-80 (221)
481 1qsg_A Enoyl-[acyl-carrier-pro 22.9 4.1E+02 0.014 23.8 10.6 77 77-163 10-92 (265)
482 3cx3_A Lipoprotein; zinc-bindi 22.8 4.6E+02 0.016 24.2 11.2 75 106-196 179-254 (284)
483 1t9k_A Probable methylthioribo 22.7 3.8E+02 0.013 25.9 9.6 107 74-197 146-267 (347)
484 3kcq_A Phosphoribosylglycinami 22.7 4.1E+02 0.014 23.7 9.2 88 80-182 13-102 (215)
485 2epl_X N-acetyl-beta-D-glucosa 22.3 2.8E+02 0.0095 29.3 9.1 111 72-197 41-164 (627)
486 3bk2_A RNAse J, metal dependen 22.0 2.8E+02 0.0096 28.7 9.1 74 105-192 340-423 (562)
487 2fwm_X 2,3-dihydro-2,3-dihydro 21.9 4.2E+02 0.014 23.5 10.9 94 76-185 7-103 (250)
488 3s5o_A 4-hydroxy-2-oxoglutarat 21.8 1.8E+02 0.0062 27.6 7.0 61 132-196 25-88 (307)
489 2iyg_A APPA, antirepressor of 21.5 2.8E+02 0.0095 22.5 7.0 86 158-252 16-110 (124)
490 2gdz_A NAD+-dependent 15-hydro 21.2 3.1E+02 0.01 24.7 8.4 78 77-163 8-91 (267)
491 4dpp_A DHDPS 2, dihydrodipicol 21.1 3.5E+02 0.012 26.3 9.0 69 122-198 151-219 (360)
492 3flu_A DHDPS, dihydrodipicolin 21.1 1.8E+02 0.0062 27.4 6.8 56 139-196 23-81 (297)
493 3dqp_A Oxidoreductase YLBE; al 21.0 1.9E+02 0.0065 25.1 6.7 68 78-165 2-70 (219)
494 4h27_A L-serine dehydratase/L- 20.9 2.7E+02 0.0091 27.0 8.2 83 77-171 94-176 (364)
495 3u0b_A Oxidoreductase, short c 20.8 4.8E+02 0.016 26.0 10.4 97 78-185 215-317 (454)
496 1qyd_A Pinoresinol-lariciresin 20.8 3.6E+02 0.012 24.7 9.0 96 77-192 5-109 (313)
497 3gi1_A LBP, laminin-binding pr 20.8 5.1E+02 0.017 24.0 14.1 77 105-196 180-256 (286)
498 3vnd_A TSA, tryptophan synthas 20.7 4.8E+02 0.016 24.1 9.5 12 118-129 141-152 (267)
499 3o26_A Salutaridine reductase; 20.7 4.6E+02 0.016 23.8 9.8 80 77-165 13-98 (311)
500 2yxb_A Coenzyme B12-dependent 20.7 2.8E+02 0.0096 23.3 7.4 58 119-191 40-97 (161)
No 1
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-54 Score=462.65 Aligned_cols=417 Identities=56% Similarity=0.991 Sum_probs=357.4
Q ss_pred chHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcC-CCCCCCcEEEe
Q psy13922 4 VFSLSLQVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDG-QPADWQDVILS 82 (509)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g-~~~~~~~i~~t 82 (509)
+.+++|+++.+++.|..++.+.||..+++++.+++....+.....|+++.|.+++|+++++++.+++| +++++++|++|
T Consensus 80 ~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t 159 (498)
T 3ihj_A 80 PITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLT 159 (498)
T ss_dssp CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEE
T ss_pred cchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEc
Confidence 67899999999999999999999999999999999885443556699999999999999999998884 88899999999
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEE
Q psy13922 83 AGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAI 162 (509)
Q Consensus 83 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~i 162 (509)
+|+++++..++++++++||++++.|+++.|+|..|...++..|++++.++++++++|.+|++.|++.+++.....++++|
T Consensus 160 ~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i 239 (498)
T 3ihj_A 160 TGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVL 239 (498)
T ss_dssp SSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEE
T ss_pred CCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEE
Confidence 99999999999999988743345999999999999999999999999999998888999999999999874222248999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCC-CCceeEEEEecccccC
Q psy13922 163 VIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPY-KSMELASFMSCSKGYM 241 (509)
Q Consensus 163 vi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vi~i~S~SK~~~ 241 (509)
++++||||||.++|.+++++|+++|++||++||+||+|.++.++++..+.++.++..+++..+ +..++|+++||||.++
T Consensus 240 ~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 319 (498)
T 3ihj_A 240 CIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYM 319 (498)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTT
T ss_pred EEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccc
Confidence 999999999999999999999999999999999999999999976546778887766543221 1345899999999996
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccC
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVN 321 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 321 (509)
|++|+|+||++++++++++++.+.+..+...+++.+ +|.++..+++
T Consensus 320 G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~----------------------------------~q~a~~~~l~ 365 (498)
T 3ihj_A 320 GECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVS----------------------------------GQAAMDIVVN 365 (498)
T ss_dssp CCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHH----------------------------------HHHHHHHHTC
T ss_pred cCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHH----------------------------------HHHHHHHHhc
Confidence 689999999986567999999998887766777887 7888888888
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHH
Q psy13922 322 PPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFEL 401 (509)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 401 (509)
+++.+++.|+.+.++.+++++.++++++.+.+.|+++||+++.++++++|+|+++.+|..........|+.+++.++.++
T Consensus 366 ~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~l 445 (498)
T 3ihj_A 366 PPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKL 445 (498)
T ss_dssp CCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHH
T ss_pred CCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHH
Confidence 77777888999988899999999999999999999999999999999999999998888776666777887677667899
Q ss_pred HhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEE
Q psy13922 402 LERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRT 481 (509)
Q Consensus 402 l~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rl 481 (509)
|+++||.++||+.|+.. ++.. +||+
T Consensus 446 l~~~gI~v~pG~~f~~~-----------------------------------------------~~~~--------~~Ri 470 (498)
T 3ihj_A 446 LEETGICVVPGSGFGQR-----------------------------------------------EGTY--------HFRM 470 (498)
T ss_dssp HHHHCBCCEEGGGTCCC-----------------------------------------------TTCC--------BEEE
T ss_pred HHHCCEEEEeCcccCCC-----------------------------------------------CCCC--------EEEE
Confidence 99999999999988762 2323 9999
Q ss_pred EeecChHHHHHHHHHHHHHHHHHHhhcC
Q psy13922 482 TILPQPEKLKAMLEKFREFHEEFLAKYK 509 (509)
Q Consensus 482 s~~~~~~~i~~~~~~l~~~~~~~~~~~~ 509 (509)
+++.++++|++++++|+++++++++||+
T Consensus 471 s~~~~~e~l~~~i~~L~~~~~~~~~~~~ 498 (498)
T 3ihj_A 471 TILPPVEKLKTVLQKVKDFHINFLEKYA 498 (498)
T ss_dssp ECCSCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999996
No 2
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=2.8e-52 Score=445.11 Aligned_cols=413 Identities=47% Similarity=0.831 Sum_probs=359.9
Q ss_pred chHHHHHHHHhhcCCCCCCCCC----CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcE
Q psy13922 4 VFSLSLQVLALVSLPQLFDDPR----FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDV 79 (509)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~----~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i 79 (509)
+++++|++++++..|+.++.+. +|..+++++.+.+....+.....|++..|.+++|+++++++.+++|.++++++|
T Consensus 81 p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i 160 (500)
T 3tcm_A 81 PVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDI 160 (500)
T ss_dssp CCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGE
T ss_pred CCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccE
Confidence 5678999999999999998887 899999999888887544355669999999999999999999999988999999
Q ss_pred EEeCCHHHHHHHHHHHhh-cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-C
Q psy13922 80 ILSAGASDGIKSVLKLLI-EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-C 157 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~-~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~ 157 (509)
++|+|+++++..+++.++ ++|| .|+++.|+|..+...++..|++++.++++++.+|.+|++.|++.+++.... .
T Consensus 161 ~~t~G~~~al~~~~~~l~~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 236 (500)
T 3tcm_A 161 FLTDGASPGVHLMMQLLIRNEKD----GILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGI 236 (500)
T ss_dssp EEESSSHHHHHHHHHHHCCSTTE----EEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTC
T ss_pred EEcCCHHHHHHHHHHHHcCCCCC----EEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCC
Confidence 999999999999999998 7888 999999999999999999999999999998888999999999999874322 3
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 158 NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.++++..+.++..+..+++...++.++++++|+|
T Consensus 237 ~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~S 316 (500)
T 3tcm_A 237 NVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVS 316 (500)
T ss_dssp EEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESS
T ss_pred CceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCC
Confidence 58899999999999999999999999999999999999999999999976556778887777764433355689999999
Q ss_pred cccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhh
Q psy13922 238 KGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMD 317 (509)
Q Consensus 238 K~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 317 (509)
|.|+|++|+|+||+++.+.++++++.+.+..+...+++.+ +|.++.
T Consensus 317 K~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------------------------------~q~~~~ 362 (500)
T 3tcm_A 317 KGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNIT----------------------------------GQILAS 362 (500)
T ss_dssp STTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHH----------------------------------HHHHHH
T ss_pred ccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHH----------------------------------HHHHHH
Confidence 9985689999999984334899999998877766777777 677777
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHH
Q psy13922 318 CVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (509)
.++++.+.+++.|+.+.++++++++.++++++.+.+.|+++||+.+.++++++|+|+++.+|..........|..++..+
T Consensus 363 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~ 442 (500)
T 3tcm_A 363 LVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFY 442 (500)
T ss_dssp HHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHH
T ss_pred HHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHH
Confidence 77766555677788888889999999999999999999999999999999999999988888876665566777777777
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
+.++|+++||.++||+.|+.. ++..
T Consensus 443 ~~~ll~~~gI~v~pg~~f~~~-----------------------------------------------~g~~-------- 467 (500)
T 3tcm_A 443 ALRLLESTGIVVVPGSGFGQV-----------------------------------------------PGTW-------- 467 (500)
T ss_dssp HHHHHHHHCEECEESTTTCCC-----------------------------------------------TTCC--------
T ss_pred HHHHHHHCCEEEEeCcccCCC-----------------------------------------------CCCC--------
Confidence 789999999999999988862 2333
Q ss_pred eEEEEeecChHHHHHHHHHHHHHHHHHHhhcC
Q psy13922 478 HFRTTILPQPEKLKAMLEKFREFHEEFLAKYK 509 (509)
Q Consensus 478 ~~Rls~~~~~~~i~~~~~~l~~~~~~~~~~~~ 509 (509)
+||++++.++++|++++++|+++++++.++|+
T Consensus 468 ~iRis~~~~~e~i~~~i~~l~~~~~~~~~~~~ 499 (500)
T 3tcm_A 468 HFRCTILPQEDKIPAVISRFTVFHEAFMSEYR 499 (500)
T ss_dssp BEEEESCSCTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999996
No 3
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.6e-43 Score=364.78 Aligned_cols=342 Identities=21% Similarity=0.352 Sum_probs=280.3
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|++ |+.+.+++.+.+.. .. .+|++..|.+++|+++++++...+|+++++++|++|+|+++++.+++++++++
T Consensus 39 ~~~~~~~~~~v~~a~~~~~~~---~~-~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~ 114 (385)
T 1b5p_A 39 GEPDFDTPEHVKEAARRALAQ---GK-TKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDP 114 (385)
T ss_dssp SSCSSCCCHHHHHHHHHHHHT---TC-CSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCT
T ss_pred CCCCCCCCHHHHHHHHHHHhc---CC-CCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCC
Confidence 55554 67899999888876 23 35988889999999999999998898888999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|..+...++..|++++.++.+++.+|.+|++.|++.+++ ++++|++++||||||.++|.++
T Consensus 115 gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~p~NPtG~~~~~~~ 185 (385)
T 1b5p_A 115 GD----EVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP-----RTKALVVNSPNNPTGAVYPKEV 185 (385)
T ss_dssp TC----EEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT-----TEEEEEEESSCTTTCCCCCHHH
T ss_pred CC----EEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC-----CCEEEEEeCCCCCCCCCcCHHH
Confidence 88 99999999999999999999999999998655688999999998876 7899999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|+++|++||+||+|.++.+++ .+.++.++.+ .++++++||||.+ |++|+|+||++ .+++
T Consensus 186 l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~--------~~~i~~~s~SK~~-~~~G~RiG~~~---~~~~ 251 (385)
T 1b5p_A 186 LEALARLAVEHDFYLVSDEIYEHLLYEG--EHFSPGRVAP--------EHTLTVNGAAKAF-AMTGWRIGYAC---GPKE 251 (385)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBSSS--CCCCGGGTCT--------TTEEEEEESTTTT-TCGGGCCEEEE---CCHH
T ss_pred HHHHHHHHHHcCCEEEEEccchhcccCC--CCCCHHHcCC--------CCEEEEEechhhc-CCcccceEEEE---eCHH
Confidence 9999999999999999999999998864 3344443311 2489999999999 79999999998 7899
Q ss_pred HHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+...... ..+++.+ .|.++..+++. .+...++++
T Consensus 252 ~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~-------~~~~~~~~~ 290 (385)
T 1b5p_A 252 VIKAMASVSRQSTTSPDTI----------------------------------AQWATLEALTN-------QEASRAFVE 290 (385)
T ss_dssp HHHHHHHHHHTTTCSCCHH----------------------------------HHHHHHHHHHC-------HHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCCHH----------------------------------HHHHHHHHHhC-------CCcchHHHH
Confidence 99999876653 3456666 44444333320 000234578
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
++++.++++++.+.+.|+++ |+.+.++++++|+|++++. .|. +..++...++ ++||.++||..|+.
T Consensus 291 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~----------~~~-~~~~l~~~l~-~~gv~v~~g~~f~~- 356 (385)
T 1b5p_A 291 MAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSP----------IAP-DEVRAAERLL-EAGVAVVPGTDFAA- 356 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCCBCCCSBTTEEEEECTT----------TCS-SHHHHHHHHH-HTTEECEESGGGTC-
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecCC----------CCC-CHHHHHHHHH-HCCeEEecccccCC-
Confidence 88999999999999999998 8888889999999987741 122 3445555555 88999999987754
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
++ ++|||++.++++|++++++|+
T Consensus 357 -----------------------------------------------~~----------~iRis~~~~~~~i~~~l~~l~ 379 (385)
T 1b5p_A 357 -----------------------------------------------FG----------HVRLSYATSEENLRKALERFA 379 (385)
T ss_dssp -----------------------------------------------TT----------EEEEECCSCHHHHHHHHHHGG
T ss_pred -----------------------------------------------CC----------eEEEEecCCHHHHHHHHHHHH
Confidence 33 899999999999999999998
Q ss_pred HHHH
Q psy13922 499 EFHE 502 (509)
Q Consensus 499 ~~~~ 502 (509)
++++
T Consensus 380 ~~l~ 383 (385)
T 1b5p_A 380 RVLG 383 (385)
T ss_dssp GGC-
T ss_pred HHHh
Confidence 8764
No 4
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=4e-43 Score=365.55 Aligned_cols=380 Identities=19% Similarity=0.249 Sum_probs=299.3
Q ss_pred hHHHHHHHHhhcCCCCC----CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-C
Q psy13922 5 FSLSLQVLALVSLPQLF----DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-Q 77 (509)
Q Consensus 5 ~~~~~~~~~~~~~~~~~----~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~ 77 (509)
.+.+++++.....+..+ |.|.+ |+.+++++.+.+.... ...+|++..|..++|+++++++++.+|+++++ +
T Consensus 15 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~--~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~ 92 (422)
T 3fvs_A 15 YNPWVEFVKLASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDF--MLNQYTKTFGYPPLTKILASFFGELLGQEIDPLR 92 (422)
T ss_dssp CCHHHHHHHHHHTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCG--GGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHH
T ss_pred ccHHHHHHHHhhcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCC--ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCC
Confidence 35678888877766654 66665 6799999999988721 24569998899999999999999999988888 6
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCC----------CCCCCCCHHHHH
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDE----------SKQWGLPISELE 147 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~~~d~~~L~ 147 (509)
+|++|+|+++++..++++++++|| +|+++.|+|.++...++..|.+++.++.++ ..+|.+|++.|+
T Consensus 93 ~i~~~~g~~~a~~~~~~~~~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~ 168 (422)
T 3fvs_A 93 NVLVTVGGYGALFTAFQALVDEGD----EVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELA 168 (422)
T ss_dssp HEEEESHHHHHHHHHHHHHCCTTC----EEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHH
T ss_pred cEEEECChHHHHHHHHHHHcCCCC----EEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHH
Confidence 999999999999999999999988 999999999999999999999999999876 236779999999
Q ss_pred HHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCC
Q psy13922 148 RSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKS 227 (509)
Q Consensus 148 ~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (509)
+.+++ ++++|++++||||||.++|++++++|+++|+++|+++|+||+|.++.+++. .+.++.++... .
T Consensus 169 ~~~~~-----~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~------~ 236 (422)
T 3fvs_A 169 GKFTS-----RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH-QHISIASLPGM------W 236 (422)
T ss_dssp TTCCT-----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC-CCCCGGGSTTT------G
T ss_pred hhcCC-----CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC-CCCChhhcccc------c
Confidence 98876 799999999999999999999999999999999999999999999988753 33444333211 2
Q ss_pred ceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcc
Q psy13922 228 MELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGC 306 (509)
Q Consensus 228 ~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (509)
.+++++.|+||.+ |++|+|+||++ .++++++.+..... ..++.+.+
T Consensus 237 ~~~i~~~S~sK~~-g~~G~r~G~~~---~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 283 (422)
T 3fvs_A 237 ERTLTIGSAGKTF-SATGWKVGWVL---GPDHIMKHLRTVHQNSVFHCPTQ----------------------------- 283 (422)
T ss_dssp GGEEEEEEHHHHH-TCGGGCCEEEE---CCHHHHHHHHHHHHTTTCCCCHH-----------------------------
T ss_pred CcEEEEecchhcc-CCccceEEEEE---eCHHHHHHHHHHHhhccCCCCcH-----------------------------
Confidence 3589999999999 79999999998 79999999887655 34456666
Q ss_pred cCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHH
Q psy13922 307 RGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKA 386 (509)
Q Consensus 307 ~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 386 (509)
.+.++..+++... ..+..+.++++++++.++++++.+.+.|+++ |+.+..+.+++|+|+++....
T Consensus 284 -----~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~------ 348 (422)
T 3fvs_A 284 -----SQAAVAESFEREQ---LLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQGSYFLITDISDFK------ 348 (422)
T ss_dssp -----HHHHHHHHHHHHH---HTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECHHHH------
T ss_pred -----HHHHHHHHHhhcc---ccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEechhhc------
Confidence 3333333322000 0000022347888999999999999999998 899888999999998774211
Q ss_pred hhcCCCC---------cHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhh
Q psy13922 387 KAEGKCP---------SVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESL 457 (509)
Q Consensus 387 ~~~g~~~---------~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (509)
.+..+ +.+++..+++++||.+.||..|+....
T Consensus 349 --~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~------------------------------------- 389 (422)
T 3fvs_A 349 --RKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPH------------------------------------- 389 (422)
T ss_dssp --HHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHH-------------------------------------
T ss_pred --ccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcC-------------------------------------
Confidence 01111 346677788889999999998875100
Q ss_pred hcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHHH
Q psy13922 458 ERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~~ 503 (509)
...+.+ ++|+|++.++++|++++++|++++++
T Consensus 390 ------~~~~~~--------~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 390 ------QKHFDH--------YIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp ------HTTSCS--------EEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred ------CCCCCC--------eEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 001223 99999999999999999999998753
No 5
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=5.4e-43 Score=366.01 Aligned_cols=349 Identities=24% Similarity=0.369 Sum_probs=287.2
Q ss_pred CCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCC
Q psy13922 25 RFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 25 ~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~ 104 (509)
..|+.+++++.+.+.. .....|++..|..++|+++++++... +.++++++|++|+|+++|+..+++.++++||
T Consensus 71 ~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd--- 143 (427)
T 3dyd_A 71 PTDPEVTQAMKDALDS---GKYNGYAPSIGFLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQ--- 143 (427)
T ss_dssp CCCHHHHHHHHHHHHH---CCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTTC---
T ss_pred CCCHHHHHHHHHHHhc---CcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCCC---
Confidence 3478999999999987 44556999999999999999999766 7778889999999999999999999999888
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDII 184 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~ 184 (509)
+|+++.|+|.++...++..|.+++.++.+++.+|.+|++.|++.+++ ++++|++++|+||||.+++.+++++|+
T Consensus 144 -~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~ 217 (427)
T 3dyd_A 144 -NILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE-----KTACLIVNNPSNPCGSVFSKRHLQKIL 217 (427)
T ss_dssp -EEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT-----TEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred -EEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc-----CCCEEEEECCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999998766789999999998876 789999999999999999999999999
Q ss_pred HHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC------H
Q psy13922 185 KFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD------P 258 (509)
Q Consensus 185 ~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~------~ 258 (509)
++|+++|+++|+||+|.+|.+++. .+.++..+.. +.++++++|+||.| |++|+|+||+++ .+ +
T Consensus 218 ~~~~~~~~~~i~Deay~~~~~~g~-~~~~~~~~~~-------~~~vi~~~S~sK~~-~~~G~riG~~~~--~~~~~~~~~ 286 (427)
T 3dyd_A 218 AVAARQCVPILADEIYGDMVFSDC-KYEPLATLST-------DVPILSCGGLAKRW-LVPGWRLGWILI--HDRRDIFGN 286 (427)
T ss_dssp HHHHHTTCCEEEECTTTTCBCSSC-CCCCGGGGCS-------SCCEEEEEESTTTS-SCGGGCCEEEEE--ECSTTSSHH
T ss_pred HHHHHCCCEEEEEcCchhhccCCC-cCccHHHhCC-------CCcEEEEeeccccC-CCcCcceEEEEe--cCcchhhHH
Confidence 999999999999999999988643 3444443321 23489999999999 799999999984 33 5
Q ss_pred HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 259 GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 259 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
++++.+........+++.+ ++.++..+++ ....++++
T Consensus 287 ~i~~~l~~~~~~~~~~~~~----------------------------------~~~a~~~~L~---------~~~~~~~~ 323 (427)
T 3dyd_A 287 EIRDGLVKLSQRILGPCTI----------------------------------VQGALKSILC---------RTPGEFYH 323 (427)
T ss_dssp HHHHHHHHHHHHHCCSCHH----------------------------------HHHHHHHHHH---------HSCHHHHH
T ss_pred HHHHHHHHHHhccCCCCHH----------------------------------HHHHHHHHHH---------hcCHHHHH
Confidence 7888887765445567777 4555444433 11123477
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
++++.++++++.+.+.|+++|++.+..+++++|+|+.++... ..+..++.+++..+++++||++.||..|+.
T Consensus 324 ~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~-------~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~- 395 (427)
T 3dyd_A 324 NTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEH-------FPEFENDVEFTERLVAEQSVHCLPATCFEY- 395 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGG-------CTTCSSHHHHHHHHHHHHCEECEEGGGGTC-
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhh-------cCCCCCHHHHHHHHHHHCCEEEECCcccCC-
Confidence 888899999999999999999999888999999997765210 001123456677788889999999987765
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
++ ++|++++.++++|++++++|.
T Consensus 396 -----------------------------------------------~~----------~iRis~~~~~e~i~~~l~~l~ 418 (427)
T 3dyd_A 396 -----------------------------------------------PN----------FIRVVITVPEVMMLEACSRIQ 418 (427)
T ss_dssp -----------------------------------------------TT----------EEEEESCSCHHHHHHHHHHHH
T ss_pred -----------------------------------------------CC----------eEEEEECCCHHHHHHHHHHHH
Confidence 44 999999999999999999999
Q ss_pred HHHHHHH
Q psy13922 499 EFHEEFL 505 (509)
Q Consensus 499 ~~~~~~~ 505 (509)
+++++++
T Consensus 419 ~~l~~~~ 425 (427)
T 3dyd_A 419 EFCEQHY 425 (427)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9998764
No 6
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-43 Score=367.69 Aligned_cols=361 Identities=17% Similarity=0.263 Sum_probs=281.7
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.|.+ |+.+.+++.+++.. ....+|++..|.+++|+++++++.+.+|.++++++|++|+|+++++..++++++++
T Consensus 65 g~~~~~~~~~v~~a~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~ 141 (447)
T 3b46_A 65 GFFSYSPPQFAIKEAQKALDI---PMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNA 141 (447)
T ss_dssp CSCSSCCCHHHHHHHHHHTTS---GGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCT
T ss_pred CCCCCCCCHHHHHHHHHHHhC---cCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCC
Confidence 55554 68899999988875 23456999889999999999999988888888899999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCC----------CCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK----------QWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~----------~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
|| .|+++.|+|..+...++..|.+++.++.+++. +|.+|++.|++.++. ++++|++++|||
T Consensus 142 gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~v~l~~p~n 212 (447)
T 3b46_A 142 GD----EVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITS-----KTKAVIINTPHN 212 (447)
T ss_dssp TC----EEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCT-----TEEEEEEESSCT
T ss_pred CC----EEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhcc-----CCeEEEEeCCCC
Confidence 88 99999999999999999999999999987542 578999999998875 799999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeE
Q psy13922 170 PTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGG 249 (509)
Q Consensus 170 PtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G 249 (509)
|||.++|.+++++|+++|++||++||+||+|.++.+++ .+.++..+.++. ..+++++.|+||.+ |++|+|+|
T Consensus 213 ptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~-----~~~~i~i~S~sK~~-~~~G~riG 284 (447)
T 3b46_A 213 PIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD--SFTRIATLSPEI-----GQLTLTVGSAGKSF-AATGWRIG 284 (447)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS--CCCCGGGSCHHH-----HTTEEEEEEHHHHT-TCTTSCCE
T ss_pred CCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC--CCcCHHHcCCCC-----CCcEEEEecCchhc-CCcchhhE
Confidence 99999999999999999999999999999999998865 333433321111 12388899999999 79999999
Q ss_pred EEeeecC-CHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCC
Q psy13922 250 YSEVINL-DPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGE 327 (509)
Q Consensus 250 ~v~~~~~-~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 327 (509)
|++ + ++++++.+..... ...+.+.+ .|.++..+++
T Consensus 285 ~~~---~~~~~l~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~aL~------ 321 (447)
T 3b46_A 285 WVL---SLNAELLSYAAKAHTRICFASPSP----------------------------------LQEACANSIN------ 321 (447)
T ss_dssp EEE---CSCHHHHHHHHHHHHHHTSSCCHH----------------------------------HHHHHHHHHH------
T ss_pred EEE---eCCHHHHHHHHHHHhhccCCCChH----------------------------------HHHHHHHHHh------
Confidence 998 7 9999999887654 34455666 4444443332
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCC---CHHHHHHHhhcC-CCCcHHHHHHHHh
Q psy13922 328 PSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKL---PAKAIAKAKAEG-KCPSVLYAFELLE 403 (509)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~g-~~~~~~~~~~ll~ 403 (509)
.....++++++++.++++++.+.+.|+++ |+.+..+.+++|+|++++- |.+... ....+ ..++.+++..+++
T Consensus 322 --~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~l~~ 397 (447)
T 3b46_A 322 --DALKIGYFEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGTYFVLVDFSKVKIPEDYPY-PEEILNKGKDFRISHWLIN 397 (447)
T ss_dssp --HHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECTTCCCCTTCCC-CGGGSSSCHHHHHHHHHHH
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecccccCcccccc-ccccccCCCHHHHHHHHHH
Confidence 01113347889999999999999999998 8888889999999987751 000000 00000 0123456667777
Q ss_pred hcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe
Q psy13922 404 RTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI 483 (509)
Q Consensus 404 ~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~ 483 (509)
++||.+.||..|+.... ...+.+ ++|+++
T Consensus 398 ~~gV~v~pg~~f~~~~~-------------------------------------------~~~~~~--------~iRls~ 426 (447)
T 3b46_A 398 ELGVVAIPPTEFYIKEH-------------------------------------------EKAAEN--------LLRFAV 426 (447)
T ss_dssp HTCEECBCGGGGSCGGG-------------------------------------------GGGGTT--------EEEEEC
T ss_pred hCCEEEECchHhCCCCc-------------------------------------------cCCCCC--------EEEEEE
Confidence 89999999988875100 000123 999999
Q ss_pred ecChHHHHHHHHHHHHH
Q psy13922 484 LPQPEKLKAMLEKFREF 500 (509)
Q Consensus 484 ~~~~~~i~~~~~~l~~~ 500 (509)
+.++++|++++++|+++
T Consensus 427 ~~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 427 CKDDAYLENAVERLKLL 443 (447)
T ss_dssp CSCHHHHHHHHHHGGGG
T ss_pred eCCHHHHHHHHHHHHHH
Confidence 99999999999999873
No 7
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=3.2e-42 Score=362.48 Aligned_cols=370 Identities=18% Similarity=0.308 Sum_probs=291.5
Q ss_pred HHHHHHHHhhcCCCCC----CCCC---CC-HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC
Q psy13922 6 SLSLQVLALVSLPQLF----DDPR---FP-DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ 77 (509)
Q Consensus 6 ~~~~~~~~~~~~~~~~----~~~~---~p-~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~ 77 (509)
+.+|+++.....|.++ |.|. +| +.+.+++.+.++... ....+|++..|.+++|+++++++.+.+|.+ +++
T Consensus 64 s~~~~~~~~~~~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~-~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~ 141 (448)
T 3aow_A 64 SEVRELLKLVETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYA-DKALQYGTTKGFTPLRETLMKWLGKRYGIS-QDN 141 (448)
T ss_dssp CHHHHHHHHHHTSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSH-HHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TTS
T ss_pred cHHHHHHHhccCCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhh-HHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-Chh
Confidence 4678888877766654 4443 34 468888888887611 123469999999999999999998888876 789
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH- 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~- 156 (509)
+|++|+|+++++..++++++++|| .|+++.|+|.++...++..|.+++.++.+++ ++|++.|++.++.....
T Consensus 142 ~v~~t~G~~~al~~~~~~l~~~Gd----~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~L~~~l~~~~~~~ 214 (448)
T 3aow_A 142 DIMITSGSQQALDLIGRVFLNPGD----IVVVEAPTYLAALQAFNFYEPQYIQIPLDDE---GMKVEILEEKLKELKSQG 214 (448)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTC----EEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECHHHHHHHHHHHHHTT
T ss_pred hEEEeCcHHHHHHHHHHHHcCCCC----EEEEeCCChHHHHHHHHHcCCEEEEeccCCC---CCCHHHHHHHHhhhhccC
Confidence 999999999999999999999988 9999999999999999999999999998764 58999999999721000
Q ss_pred CCceEEE-EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEe
Q psy13922 157 CNPRAIV-IINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMS 235 (509)
Q Consensus 157 ~~~~~iv-i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 235 (509)
.++++|+ +++|+||||.++|.+++++|+++|++||++||+||+|.++.+++. ...++.++.. ..++++++|
T Consensus 215 ~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~-~~~~~~~~~~-------~~~vi~~~S 286 (448)
T 3aow_A 215 KKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGN-PEKKIKALDN-------EGRVIYLGT 286 (448)
T ss_dssp CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSC-CCCCTGGGCT-------TSCEEEEEE
T ss_pred CCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC-CCcCHHhcCC-------CCCEEEEcc
Confidence 2688986 589999999999999999999999999999999999999988643 3344444321 234899999
Q ss_pred cccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccc
Q psy13922 236 CSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQT 314 (509)
Q Consensus 236 ~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (509)
|||.+ | +|+|+||++ +++++++.+..... ...+++.+ .|.
T Consensus 287 ~SK~~-~-~GlriG~v~---~~~~l~~~l~~~~~~~~~~~~~~----------------------------------~q~ 327 (448)
T 3aow_A 287 FSKIL-A-PGFRIGWMV---GDPGIIRKMEIAKQSTDLCTNVF----------------------------------GQV 327 (448)
T ss_dssp STTTT-C-GGGCCEEEE---ECHHHHHHHHHHHHHHHSSCCHH----------------------------------HHH
T ss_pred chhhc-c-ccccEEEEE---eCHHHHHHHHHHHHHhcCCCCHH----------------------------------HHH
Confidence 99999 7 999999998 68999999987654 23455666 455
Q ss_pred hhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-CCeeccCCceeEEeecCCCCHHHHHHHhhcCCC
Q psy13922 315 VMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS-IE-GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKC 392 (509)
Q Consensus 315 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 392 (509)
++..+++ + ..+.++++++++.++++++.+.+.|++ +| ++.+..|.+++|+|++++ . +.
T Consensus 328 a~~~~L~-----~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~--~---------~~- 387 (448)
T 3aow_A 328 VAWRYVD-----G---GYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLP--D---------GI- 387 (448)
T ss_dssp HHHHHHH-----T---THHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECS--T---------TC-
T ss_pred HHHHHHH-----h---CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcC--C---------CC-
Confidence 5444443 1 123455888999999999999999987 67 688888899999998775 1 22
Q ss_pred CcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCC
Q psy13922 393 PSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQ 472 (509)
Q Consensus 393 ~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (509)
+..+++..++++ ||.++||..|+... .+.+
T Consensus 388 ~~~~l~~~l~~~-gV~v~pg~~f~~~~----------------------------------------------~~~~--- 417 (448)
T 3aow_A 388 DSKKMLERAIKK-GVAYVPGEAFYAHR----------------------------------------------DVKN--- 417 (448)
T ss_dssp CHHHHHHHHHHT-TEECEEGGGGSTTC----------------------------------------------CCCS---
T ss_pred CHHHHHHHHHHC-CcEEEcchhhcCCC----------------------------------------------CCCC---
Confidence 345555555555 99999999887610 1222
Q ss_pred CCCceeEEEEee-cChHHHHHHHHHHHHHHHHHHh
Q psy13922 473 VPGTYHFRTTIL-PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 473 ~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
+||++++ .++++|++++++|.++++++.+
T Consensus 418 -----~iRls~~~~~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 418 -----TMRLNFTYVDEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp -----EEEEECSSSCTHHHHHHHHHHHHHHHHHHC
T ss_pred -----EEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 5799999999999999987654
No 8
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1.7e-41 Score=350.16 Aligned_cols=352 Identities=16% Similarity=0.253 Sum_probs=280.4
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCC-CCCC-cEEEeCCHHHHHHHHHHHhh
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQP-ADWQ-DVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~-~~~~-~i~~t~G~~~al~~~~~~l~ 97 (509)
+.|.+ |+.+++++.+.+.. ..+|++..|..++|+++++++.+++|++ ++++ +|++|+|+++++..++++++
T Consensus 38 ~~~~~~~~~~v~~a~~~~~~~-----~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~ 112 (396)
T 3jtx_A 38 GEPKHPTPKVITDALTASLHE-----LEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVL 112 (396)
T ss_dssp CSCCSCCCHHHHHHHHHTGGG-----GGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHC
T ss_pred cCCCCCCCHHHHHHHHHHhhh-----ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHh
Confidence 55555 68899998887753 4559999999999999999999998987 7888 99999999999999999999
Q ss_pred cCC-CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 98 EDV-DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 98 ~~g-d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
++| ++.++.|+++.|+|.++...++..|.+++.++.+ +.+|.+|++.|++.+++ ++++|++++||||||.+++
T Consensus 113 ~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~g~~~d~~~l~~~~~~-----~~~~v~l~~p~nptG~~~~ 186 (396)
T 3jtx_A 113 NPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCP-APSFNPDWRSISEEVWK-----RTKLVFVCSPNNPSGSVLD 186 (396)
T ss_dssp CC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECC-TTTCCCCGGGSCHHHHH-----TEEEEEEESSCTTTCCCCC
T ss_pred CCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecC-CCCCccCHHHHHHhhcc-----CcEEEEEECCCCCCCCcCC
Confidence 886 1111399999999999999999999999999994 44678999999999987 7999999999999999999
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
.+++++|+++|+++|+++|+||+|.++.+++. .+.+.......+... ..++++++|+||.+ |++|+|+||++ .
T Consensus 187 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~-~~~G~r~G~~~---~ 259 (396)
T 3jtx_A 187 LDGWKEVFDLQDKYGFIIASDECYSEIYFDGN-KPLGCLQAAAQLGRS--RQKLLMFTSLSKRS-NVPGLRSGFVA---G 259 (396)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC-CCCCHHHHHHHTTCC--CTTEEEEEESTTTS-SCGGGCCEEEE---E
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCchHHhhhhhcccc--cCcEEEEecccccc-CCcccceEEEE---e
Confidence 99999999999999999999999999988753 333444333222211 23488899999999 79999999998 7
Q ss_pred CHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 257 DPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 257 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
++++++.+..... ...+++.+ ++.++..+++ ..+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~-----------~~~ 294 (396)
T 3jtx_A 260 DAELLKNFLLYRTYHGSAMSIP----------------------------------VQRASIAAWD-----------DEQ 294 (396)
T ss_dssp CHHHHHHHHHHHHHHTCCCCHH----------------------------------HHHHHHHHHH-----------CCH
T ss_pred CHHHHHHHHHHHhhcccCCCHH----------------------------------HHHHHHHHhC-----------CHH
Confidence 9999999987655 34456666 4444444433 123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
++++.++.++++++.+.+.|+++ +.+..+.+++++|++++. .++..++..+++++||.+.||..|
T Consensus 295 ~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~~~gi~v~~g~~~ 359 (396)
T 3jtx_A 295 HVIDNRRLYQEKFERVIPILQQV--FDVKLPDASFYIWLKVPD-------------GDDLAFARNLWQKAAIQVLPGRFL 359 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT--SCCCCCSSSSEEEEECTT-------------SCHHHHHHHHHHHHCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCccCCCeeEEEEEECCC-------------CCHHHHHHHHHHHCCEEEeCChHh
Confidence 47888899999999999999875 456678899999987751 134555677778899999999988
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+.. .. +...+..++||+++.++++|+++++
T Consensus 360 ~~~------------------------------------------------~~--~~~~~~~~iRis~~~~~~~i~~~l~ 389 (396)
T 3jtx_A 360 ARD------------------------------------------------TE--QGNPGEGYVRIALVADVATCVKAAE 389 (396)
T ss_dssp CCC------------------------------------------------CT--TCCTTTTEEEEECCSCHHHHHHHHH
T ss_pred CCc------------------------------------------------cc--ccCCCCCeEEEEEcCCHHHHHHHHH
Confidence 761 00 0011233999999999999999999
Q ss_pred HHHHHH
Q psy13922 496 KFREFH 501 (509)
Q Consensus 496 ~l~~~~ 501 (509)
+|++++
T Consensus 390 ~l~~~l 395 (396)
T 3jtx_A 390 DIVSLY 395 (396)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 998864
No 9
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=1e-42 Score=360.91 Aligned_cols=374 Identities=17% Similarity=0.203 Sum_probs=293.7
Q ss_pred HHHHHHHHhhcCCCCC----CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-Cc
Q psy13922 6 SLSLQVLALVSLPQLF----DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QD 78 (509)
Q Consensus 6 ~~~~~~~~~~~~~~~~----~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~ 78 (509)
+.++.++.....++++ +.|.+ |+.+++++.+++.. ....+|++..|..++|+++++++.+.+|+++++ ++
T Consensus 11 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~ 87 (410)
T 3e2y_A 11 NVWVEFTKLAADPSVVNLGQGFPDISPPSYVKEELSKAAFI---DNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEE 87 (410)
T ss_dssp CHHHHTTTTTTSTTSEECSSCCCCSCCCHHHHHHHHHHHTC---GGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTS
T ss_pred cHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhC---ccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 4667777766666655 66765 67899999999887 345569998899999999999999999988888 79
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCC---------CCCCCCCHHHHHHH
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDE---------SKQWGLPISELERS 149 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~---------~~~~~~d~~~L~~~ 149 (509)
|++|+|+++++..+++.++++|| +|+++.|+|.++...++..|.+++.++.++ +.+|.+|++.|++.
T Consensus 88 i~~~~g~~~a~~~~~~~~~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~ 163 (410)
T 3e2y_A 88 ILVAVGAYGSLFNSIQGLVDPGD----EVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESK 163 (410)
T ss_dssp EEEESHHHHHHHHHHHHHCCTTC----EEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTT
T ss_pred EEEeCCcHHHHHHHHHHhcCCCC----EEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhh
Confidence 99999999999999999999988 999999999999999999999999999863 23567899999998
Q ss_pred HHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCce
Q psy13922 150 ITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSME 229 (509)
Q Consensus 150 i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (509)
+++ ++++|++++|+||||.+++++++++|+++|+++|+++|+||+|.++.+++. .+.++.++... ..+
T Consensus 164 ~~~-----~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~------~~~ 231 (410)
T 3e2y_A 164 FSS-----KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH-THVKIATLPGM------WER 231 (410)
T ss_dssp CCT-----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC-CCCCGGGSTTC------GGG
T ss_pred cCC-----CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC-CCCCHHHcCCc------cCe
Confidence 876 799999999999999999999999999999999999999999999988653 33344333111 235
Q ss_pred eEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccC
Q psy13922 230 LASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRG 308 (509)
Q Consensus 230 vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (509)
+++++|+||.+ |++|+|+||++ .++++++.+..... ...+++.+
T Consensus 232 ~i~~~S~sK~~-g~~G~r~G~~~---~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 276 (410)
T 3e2y_A 232 TITIGSAGKTF-SVTGWKLGWSI---GPAHLIKHLQTVQQNSFYTCATP------------------------------- 276 (410)
T ss_dssp EEEEEEHHHHS-SCGGGCCEEEE---CCHHHHHHHHHHHHTTTCCCCHH-------------------------------
T ss_pred EEEEecchhhc-CCCCceEEEEE---ECHHHHHHHHHHHHhhccCCChH-------------------------------
Confidence 89999999999 79999999998 79999999887665 34556666
Q ss_pred cccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhh
Q psy13922 309 QSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKA 388 (509)
Q Consensus 309 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 388 (509)
.+.++..+++... ..+..+.++++++++.++++++.+.+.|+++ |+.+..+++++|+|+++....
T Consensus 277 ---~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-------- 341 (410)
T 3e2y_A 277 ---LQAALAEAFWIDI---KRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGYFIIADVSSLG-------- 341 (410)
T ss_dssp ---HHHHHHHHHHHHH---TTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECGGGC--------
T ss_pred ---HHHHHHHHHHhhh---ccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCccEEEEEEchhhh--------
Confidence 3333332221000 0000122347888899999999999999998 899889999999998775110
Q ss_pred cCCC-------CcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhccc
Q psy13922 389 EGKC-------PSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTG 461 (509)
Q Consensus 389 ~g~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (509)
.+.. ++.+++..+++++||.+.||..|+.... .
T Consensus 342 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~---------------------------~------------- 381 (410)
T 3e2y_A 342 ADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKS---------------------------K------------- 381 (410)
T ss_dssp CCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTT---------------------------H-------------
T ss_pred cccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCC---------------------------C-------------
Confidence 0111 1236677788899999999998865100 0
Q ss_pred ccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHH
Q psy13922 462 ICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFRE 499 (509)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~ 499 (509)
..+.+ ++|||++.++++|++++++|++
T Consensus 382 ---~~~~~--------~iRis~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 382 ---PHFEK--------LVRFCFIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp ---HHHTT--------EEEEECCCCHHHHHHHHHHHHT
T ss_pred ---CCCCC--------EEEEEEcCCHHHHHHHHHHHHh
Confidence 01122 9999999999999999999975
No 10
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=3.3e-42 Score=355.84 Aligned_cols=338 Identities=21% Similarity=0.364 Sum_probs=272.1
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ |+.+.+++.+.+.+.......+|++..|..++|+++++++.+.+|+++++++|++|+|+++++..++++++++
T Consensus 43 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~ 122 (398)
T 3ele_A 43 GNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSD 122 (398)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCS
T ss_pred CCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCC
Confidence 56654 6789999999988722222456999999999999999999999998899999999999999999999999999
Q ss_pred C-CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 100 V-DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 100 g-d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
| | +|+++.|+|.++...++..|.+++.+|.+++ +|.+|++.|++.+++ ++++|++++||||||.+++.+
T Consensus 123 g~d----~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~-----~~~~v~~~~p~nptG~~~~~~ 192 (398)
T 3ele_A 123 AYD----EFITIAPYFPEYKVFVNAAGARLVEVPADTE-HFQIDFDALEERINA-----HTRGVIINSPNNPSGTVYSEE 192 (398)
T ss_dssp TTC----EEEEESSCCTHHHHHHHHTTCEEEEECCCTT-TSSCCHHHHHHTCCT-----TEEEEEECSSCTTTCCCCCHH
T ss_pred CCC----EEEEeCCCchhhHHHHHHcCCEEEEEecCCc-CCcCCHHHHHHHhCc-----CCCEEEEcCCCCCCCCCCCHH
Confidence 8 8 9999999999999999999999999998754 689999999999876 799999999999999999999
Q ss_pred HHHHHHHHHHH------CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 179 NIQDIIKFAHR------EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 179 ~l~~l~~ia~~------~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
++++|+++|++ +|+++|+||+|.+|.+++. ........ ..++++++|+||.+ |++|+|+||++
T Consensus 193 ~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~---------~~~~i~~~s~sK~~-~~~G~r~G~~~ 261 (398)
T 3ele_A 193 TIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGI-KVPFVTKY---------YDNTLVCYSYSKSL-SLPGERIGYVL 261 (398)
T ss_dssp HHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTC-CCCCGGGT---------CSSEEEEEESTTTS-SCTTTCCEEEE
T ss_pred HHHHHHHHHHhhhhccCCCeEEEEeccccccccCCC-CcCChHhh---------cCCeEEEEehhhcC-CCccceeEEEE
Confidence 99999999999 9999999999999988653 22222111 22489999999999 79999999998
Q ss_pred eecCCHH------HHHHHHHhhh--cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCC
Q psy13922 253 VINLDPG------VKAMLHKSIS--AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQ 324 (509)
Q Consensus 253 ~~~~~~~------~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 324 (509)
.+++ +.+.+..... .+.+++.+ .+.++..+++..
T Consensus 262 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~~- 303 (398)
T 3ele_A 262 ---VPDEVYDKAELYAAVCGAGRALGYVCAPSL----------------------------------FQKMIVKCQGAT- 303 (398)
T ss_dssp ---CCTTSTTHHHHHHHHHHHHHHTTCCCSCHH----------------------------------HHHHHTTCTTCC-
T ss_pred ---EcchhhhHHHHHHHHHHHhhhccccCCCHH----------------------------------HHHHHHHHhcCH-
Confidence 5555 4444443332 23445555 444444444310
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhh
Q psy13922 325 PGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLER 404 (509)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~ 404 (509)
..++.++++++.+.+.|+++ ++.+..+.+++++|++++ +. +...+ .+.|.+
T Consensus 304 --------------~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~------------~~-~~~~~-~~~l~~ 354 (398)
T 3ele_A 304 --------------GDINAYKENRDLLYEGLTRI-GYHCFKPDGAFYMFVKAL------------ED-DSNAF-CEKAKE 354 (398)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECS------------SS-CHHHH-HHHHHT
T ss_pred --------------HHHHHHHHHHHHHHHHHHHc-CCeecCCCeeEEEEEEcC------------CC-CHHHH-HHHHHH
Confidence 02456777888888888887 888889999999998765 11 23443 456778
Q ss_pred cCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee
Q psy13922 405 TGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL 484 (509)
Q Consensus 405 ~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~ 484 (509)
+||.+.||..|+. ++ ++|++++
T Consensus 355 ~gi~v~~g~~~~~------------------------------------------------~~----------~iRis~~ 376 (398)
T 3ele_A 355 EDVLIVAADGFGC------------------------------------------------PG----------WVRISYC 376 (398)
T ss_dssp TTEECEESGGGTC------------------------------------------------TT----------EEEEECC
T ss_pred CCEEEeCccccCC------------------------------------------------CC----------eEEEEec
Confidence 8999999988775 44 9999999
Q ss_pred cChHHHHHHHHHHHHHHHHHH
Q psy13922 485 PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~~~ 505 (509)
.++++|++++++|++++++++
T Consensus 377 ~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 377 VDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp SCHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999998764
No 11
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1e-41 Score=349.22 Aligned_cols=341 Identities=17% Similarity=0.232 Sum_probs=281.0
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.+.+ |+.+++++.+.+.. .. ..|++ .| .++|+++++++++++|+++++++|++|+|++++++.++++++++
T Consensus 31 ~~~~~~~~~~v~~a~~~~~~~---~~-~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~ 104 (377)
T 3fdb_A 31 AESDFSTCPAVLQAITDAVQR---EA-FGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPA 104 (377)
T ss_dssp SCCCSCCCHHHHHHHHHHHHT---TC-CSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCT
T ss_pred cCCCCCCCHHHHHHHHHHHHc---CC-CCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcCC
Confidence 55554 78999999999887 33 34988 77 89999999999999998889999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|.++...++..|.+++.++.+++ +|++.|++.+++ +++++++++|+||||.+++.++
T Consensus 105 gd----~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~-----~~~~v~i~~p~nptG~~~~~~~ 171 (377)
T 3fdb_A 105 QS----KVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQA-----GARSILLCNPYNPLGMVFAPEW 171 (377)
T ss_dssp TC----CEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHT-----TCCEEEEESSBTTTTBCCCHHH
T ss_pred CC----EEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhcc-----CCCEEEEeCCCCCCCCCCCHHH
Confidence 88 9999999999999999999999999998764 899999999987 6899999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|++||+++|+||+|.++.+++.....++..+.. ..++++++|+||.+ |++|+|+||+++ .+++
T Consensus 172 l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-------~~~~i~~~s~sK~~-g~~G~r~G~~~~--~~~~ 241 (377)
T 3fdb_A 172 LNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTA-------ASVCITITAPSKAW-NIAGLKCAQIIF--SNPS 241 (377)
T ss_dssp HHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHH-------HHHEEEEECSTTTT-TCGGGCCEEEEC--CSHH
T ss_pred HHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccC-------CCcEEEEEeChHhc-cCcchhheEEEe--CCHH
Confidence 9999999999999999999999998875123333332211 12388899999999 799999999873 5889
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+..... ...+++.+ ++.++..+++ ...++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~----------~~~~~~~ 277 (377)
T 3fdb_A 242 DAEHWQQLSPVIKDGASTL----------------------------------GLIAAEAAYR----------YGTDFLN 277 (377)
T ss_dssp HHHHHHHSCHHHHCCCCHH----------------------------------HHHHHHHHHH----------HCHHHHH
T ss_pred HHHHHHHHHHhhcCCCCHH----------------------------------HHHHHHHHHh----------ccHHHHH
Confidence 9999887654 33456666 4444333322 1234578
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNS-IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++++.++++++.+.+.|++ +|++.+..+++++++|++++.. +. +.+++..+++++||.+.||..|+.
T Consensus 278 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--~~~~~~~l~~~~gi~v~~g~~~~~ 345 (377)
T 3fdb_A 278 QEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDT----------TI--EGSPSEFFIEKAKVAMNDGAWFGE 345 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTS----------CC--CSCHHHHHHHHHCEECEEGGGGCG
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECccc----------CC--CHHHHHHHHHhCCEEecCChhccC
Confidence 8899999999999999998 8899999999999999877521 12 233467778888999999998876
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+.+ ++|++++.++++|++++++|
T Consensus 346 ------------------------------------------------~~~~--------~~Ris~~~~~e~i~~~l~~l 369 (377)
T 3fdb_A 346 ------------------------------------------------DGTG--------FCRLNFATSREVLEEAIDRM 369 (377)
T ss_dssp ------------------------------------------------GGTT--------EEEEECCSCHHHHHHHHHHH
T ss_pred ------------------------------------------------CCCC--------EEEEEeCCCHHHHHHHHHHH
Confidence 3333 99999999999999999999
Q ss_pred HHHHHH
Q psy13922 498 REFHEE 503 (509)
Q Consensus 498 ~~~~~~ 503 (509)
++++++
T Consensus 370 ~~~l~~ 375 (377)
T 3fdb_A 370 AKAVSH 375 (377)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 998854
No 12
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=2.8e-41 Score=347.79 Aligned_cols=364 Identities=24% Similarity=0.420 Sum_probs=289.8
Q ss_pred HHHHHHHHhhcC-CCCC----CCCC--CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCc
Q psy13922 6 SLSLQVLALVSL-PQLF----DDPR--FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQD 78 (509)
Q Consensus 6 ~~~~~~~~~~~~-~~~~----~~~~--~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~ 78 (509)
+.++.++..+.. +.++ +.|. .|+.+.+++.+.+.. .. .+|++..|..++|+++++++.+.+|+++++++
T Consensus 13 ~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~---~~-~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~ 88 (389)
T 1gd9_A 13 SEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDK---GL-THYGPNIGLLELREAIAEKLKKQNGIEADPKT 88 (389)
T ss_dssp CHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHT---TC-CSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTT
T ss_pred hHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhC---CC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC
Confidence 456666665543 3333 4444 368899999998876 23 34988889999999999999988888788899
Q ss_pred -EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccC
Q psy13922 79 -VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHC 157 (509)
Q Consensus 79 -i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~ 157 (509)
|++|+|+++++..++++++++|| .|+++.|+|.++...++..|.+++.++.+++.+|.+|++.|++.+++
T Consensus 89 ~v~~~~g~~~a~~~~~~~~~~~gd----~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----- 159 (389)
T 1gd9_A 89 EIMVLLGANQAFLMGLSAFLKDGE----EVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD----- 159 (389)
T ss_dssp SEEEESSTTHHHHHHHTTTCCTTC----EEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCT-----
T ss_pred eEEEcCChHHHHHHHHHHhCCCCC----EEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCc-----
Confidence 99999999999999999988888 99999999999999999999999999987655678999999999876
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 158 NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
++++|++++|+||||.++|.+++++|+++|++||+++|+||+|.++.+++. .+.++.++.. . ..++++++|+|
T Consensus 160 ~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~-~-----~~~~i~~~s~s 232 (389)
T 1gd9_A 160 KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDA-RHYSIASLDG-M-----FERTITVNGFS 232 (389)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC-CCCCGGGSTT-C-----GGGEEEEEEST
T ss_pred CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC-CCCCHhhccC-C-----CCCEEEEecCh
Confidence 789999999999999999999999999999999999999999999987642 2334433210 0 12478899999
Q ss_pred cccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchh
Q psy13922 238 KGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVM 316 (509)
Q Consensus 238 K~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 316 (509)
|.+ |++|+|+||++ .++++++.+..... ...+++.+ .+.++
T Consensus 233 K~~-~~~G~r~G~~~---~~~~~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~ 274 (389)
T 1gd9_A 233 KTF-AMTGWRLGFVA---APSWIIERMVKFQMYNATCPVTF----------------------------------IQYAA 274 (389)
T ss_dssp TTT-TCGGGCCEEEE---CCHHHHHHHHHHHTTTTCSCCHH----------------------------------HHHHH
T ss_pred hhc-CCcccceEEEE---ECHHHHHHHHHHHhhhccCCCHH----------------------------------HHHHH
Confidence 999 79999999998 68999999987655 23455665 44444
Q ss_pred hcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHH
Q psy13922 317 DCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVL 396 (509)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (509)
..+++. ....++++++++.++++++.+.+.|+++ |+++..+.+++++|++++ . .+. +..+
T Consensus 275 ~~~l~~--------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--~--------~~~-~~~~ 334 (389)
T 1gd9_A 275 AKALKD--------ERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTVKPKGAFYIFPRIR--D--------TGL-TSKK 334 (389)
T ss_dssp HHHHTC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCBTTEECCBCG--G--------GTC-CHHH
T ss_pred HHHHhC--------CCcchHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEecc--C--------CCC-CHHH
Confidence 444431 1111257888999999999999999998 888888889999997664 1 022 3445
Q ss_pred HHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCc
Q psy13922 397 YAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGT 476 (509)
Q Consensus 397 ~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (509)
+...+++++||.+.||..|+. .+.+
T Consensus 335 ~~~~l~~~~gi~v~~g~~~~~------------------------------------------------~~~~------- 359 (389)
T 1gd9_A 335 FSELMLKEARVAVVPGSAFGK------------------------------------------------AGEG------- 359 (389)
T ss_dssp HHHHHHHHTCEECEEGGGGCG------------------------------------------------GGTT-------
T ss_pred HHHHHHHhCCEEEeCchhhCC------------------------------------------------CCCC-------
Confidence 555666689999999987765 2223
Q ss_pred eeEEEEeecChHHHHHHHHHHHHHHHH
Q psy13922 477 YHFRTTILPQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 477 ~~~Rls~~~~~~~i~~~~~~l~~~~~~ 503 (509)
++|++++.++++|++++++|++++++
T Consensus 360 -~iRi~~~~~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 360 -YVRISYATAYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp -BEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred -eEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999865
No 13
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-41 Score=352.99 Aligned_cols=335 Identities=13% Similarity=0.141 Sum_probs=261.1
Q ss_pred CCHHHHHHHHHHH-hcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCc--EEEeCCHHHHHHHHHHHhhc--CC
Q psy13922 26 FPDDVKQRAQAVL-DGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQD--VILSAGASDGIKSVLKLLIE--DV 100 (509)
Q Consensus 26 ~p~~v~~a~~~~l-~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~--i~~t~G~~~al~~~~~~l~~--~g 100 (509)
.|+.+.++.. .+ .. ....+|++..|.++||+++++++.++++..+++++ |++|+|+++|+.++++.+.. +
T Consensus 48 ~~~~v~~a~~-~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~- 122 (405)
T 3k7y_A 48 IFDSVLNADK-LVTEN---YKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV- 122 (405)
T ss_dssp CCHHHHHHHH-HHHHH---CCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-
T ss_pred ccHHHHHHHH-HhcCC---CCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-
Confidence 3677888776 44 33 34456999999999999999999877776667774 69999999999999999988 7
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeC-CCCCCCCCCCHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN-PGNPTGQVLTKEN 179 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~-p~NPtG~~~s~~~ 179 (509)
| +|++++|+|.+|...++.+|++++.+|+.++.+|++|++.|++.+++. ++++++++++ ||||||.++++++
T Consensus 123 d----~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~i~l~~~~~NPTG~~~s~~~ 195 (405)
T 3k7y_A 123 E----TLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNI---PNGSSVILQISCYNPCSVNIEEKY 195 (405)
T ss_dssp C----EEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHS---CSSCEEEECCSSCTTTCCCCCHHH
T ss_pred C----EEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhC---CCCeEEEEeCCCCCCCCCCCCHHH
Confidence 8 999999999999999999999999999854446899999999999852 1467888865 4999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCC-CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEG-SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
+++|+++|+++|++||+||+|.+|.+++. ....++..+... ..++|+++||||.| |++|+|+||++++.+++
T Consensus 196 ~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~------~~~~i~~~S~SK~~-~l~GlRiG~~~~~~~~~ 268 (405)
T 3k7y_A 196 FDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEK------NIAFSVCQSFSKNM-SLYGERAGALHIVCKNQ 268 (405)
T ss_dssp HHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTT------TCCEEEEEECTTTS-CCTTTTEEEEEEECSSH
T ss_pred HHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhc------CCcEEEEeeCCccC-CCccccceEEEEEeCCH
Confidence 99999999999999999999999987532 122233333221 23599999999999 79999999986445688
Q ss_pred HHHHHHHH----hh-hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCc-hHH
Q psy13922 259 GVKAMLHK----SI-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPS-YEQ 332 (509)
Q Consensus 259 ~~~~~l~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~-~~~ 332 (509)
++++.+.. .. ..+.+++.+ +|.++..+++ ++. .+.
T Consensus 269 ~~~~~~~~~l~~~~~~~~~~~~~~----------------------------------~q~~~~~~l~-----~~~l~~~ 309 (405)
T 3k7y_A 269 EEKKIVFNNLCFIVRKFYSSPVIH----------------------------------TNRILCQLLN-----NQNLKLN 309 (405)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCCHH----------------------------------HHHHHHHHHH-----CHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCcHH----------------------------------HHHHHHHHhC-----CHHHHHH
Confidence 87765542 22 244556666 4544444433 111 134
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----cCC---CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhc
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFN----SIE---GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERT 405 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~----~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~ 405 (509)
|.++++.+++.++++++.+.+.|+ ++. ++++.+|+||||+|++++ . +++.++ +++
T Consensus 310 ~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~--~---------------~~~~~L-~~~ 371 (405)
T 3k7y_A 310 WIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLL--A---------------KIAEHL-KTH 371 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGG--G---------------GGTTTT-TTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCC--H---------------HHHHHH-HHC
Confidence 666788899999999999999999 762 267889999999997553 1 123455 889
Q ss_pred CeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-
Q psy13922 406 GICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL- 484 (509)
Q Consensus 406 gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~- 484 (509)
||+++| + . |||++
T Consensus 372 gV~v~p-------------------------------------------------------~----------~-Ris~a~ 385 (405)
T 3k7y_A 372 HIYIIN-------------------------------------------------------N----------G-RINVSG 385 (405)
T ss_dssp TEECCT-------------------------------------------------------T----------S-EEEGGG
T ss_pred CEeecC-------------------------------------------------------C----------C-eEEEec
Confidence 999885 2 1 89998
Q ss_pred cChHHHHHHHHHHHHHHH
Q psy13922 485 PQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~ 502 (509)
.++++|++++++|+++++
T Consensus 386 ~~~~~i~~~~~~i~~~~~ 403 (405)
T 3k7y_A 386 ITKNNVDYIADKICLSLS 403 (405)
T ss_dssp CCTTHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHh
Confidence 689999999999999875
No 14
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-41 Score=347.37 Aligned_cols=347 Identities=22% Similarity=0.369 Sum_probs=280.8
Q ss_pred CCCC--CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPR--FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~--~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|. .|+.+.+++.+.+.. . ..+|++..|..++|+++++++.+.+|.++++++|++|+|+++++..++++++++
T Consensus 38 ~~~~~~~~~~v~~a~~~~~~~---~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~ 113 (388)
T 1j32_A 38 GEPDFNTPKHIVEAAKAALEQ---G-KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEP 113 (388)
T ss_dssp SSCSSCCCHHHHHHHHHHHHT---T-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCT
T ss_pred CCCCCCCCHHHHHHHHHHHhc---C-CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCC
Confidence 4444 478899999988876 2 334998889999999999999998898888899999999999999999999988
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|.++...++..|.+++.++.+++.+|.+|++.|++.+++ ++++|++++|+||||.++|.++
T Consensus 114 gd----~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~p~nptG~~~~~~~ 184 (388)
T 1j32_A 114 GD----EVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP-----KTKLLVFNTPSNPTGMVYTPDE 184 (388)
T ss_dssp TC----EEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT-----TEEEEEEESSCTTTCCCCCHHH
T ss_pred CC----EEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc-----CceEEEEeCCCCCCCcCCCHHH
Confidence 88 99999999999999999999999999987655678999999999876 7999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|+++|+++|+||+|.++.+++. .+.++..+..+. ..+++++.|+||.+ |++|+|+||++ .+++
T Consensus 185 l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~s~sK~~-~~~G~r~G~~~---~~~~ 254 (388)
T 1j32_A 185 VRAIAQVAVEAGLWVLSDEIYEKILYDDA-QHLSIGAASPEA-----YERSVVCSGFAKTY-AMTGWRVGFLA---GPVP 254 (388)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTCBCTTC-CCCCGGGSCHHH-----HHTEEEEEESTTTT-TCTTTCCEEEE---CCHH
T ss_pred HHHHHHHHHHcCCEEEEEccchhcccCCC-CCCCHHHccccc-----cCCEEEEeechhcc-CCcccceEEEE---eCHH
Confidence 99999999999999999999999988643 233433332110 11378899999999 79999999998 7899
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+..... ...+++.+ .+.++..+++ ...++++
T Consensus 255 ~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~----------~~~~~~~ 290 (388)
T 1j32_A 255 LVKAATKIQGHSTSNVCTF----------------------------------AQYGAIAAYE----------NSQDCVQ 290 (388)
T ss_dssp HHHHHHHHHHTTTCSCCHH----------------------------------HHHHHHHHHH----------SCSHHHH
T ss_pred HHHHHHHHHhhcccCCCHH----------------------------------HHHHHHHHHh----------CCcHHHH
Confidence 9998887655 33455555 3333322222 0113467
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
++++.++++++.+.+.|+++|++.+..+.+++++|+++. . .+. +..++...+++++||.+.||..|+.
T Consensus 291 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~--~--------~~~-~~~~~~~~l~~~~gi~v~~g~~~~~- 358 (388)
T 1j32_A 291 EMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIA--K--------TGR-SSLDFCSELLDQHQVATVPGAAFGA- 358 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCG--G--------GTC-CHHHHHHHHHHHHCEECEEGGGGTC-
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecC--C--------CCC-CHHHHHHHHHHhCCEEEeChhhhCC-
Confidence 888999999999999999988999888899999997664 1 022 3455556666678999999887764
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
++ ++|+++++++++|++++++|+
T Consensus 359 -----------------------------------------------~~----------~iRis~~~~~~~i~~~~~~l~ 381 (388)
T 1j32_A 359 -----------------------------------------------DD----------CIRLSYATDLDTIKRGMERLE 381 (388)
T ss_dssp -----------------------------------------------TT----------BEEEECCSCHHHHHHHHHHHH
T ss_pred -----------------------------------------------CC----------cEEEEecCCHHHHHHHHHHHH
Confidence 33 899999999999999999999
Q ss_pred HHHHHH
Q psy13922 499 EFHEEF 504 (509)
Q Consensus 499 ~~~~~~ 504 (509)
++++++
T Consensus 382 ~~l~~~ 387 (388)
T 1j32_A 382 KFLHGI 387 (388)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
No 15
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=1.8e-41 Score=349.61 Aligned_cols=342 Identities=20% Similarity=0.319 Sum_probs=273.4
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|.+.+ |+.+++++.+.+.+ .. ..|++..|..++|+++++++.+.+|+++++++|++|+|+++++..++++++++
T Consensus 39 g~~~~~~~~~v~~a~~~~~~~---~~-~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~ 114 (391)
T 3h14_A 39 GQPGTGAPRGAVEALAKSLET---DA-LGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDS 114 (391)
T ss_dssp SSCSSCSCHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCT
T ss_pred CCCCCCCCHHHHHHHHHHHhc---CC-CCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCC
Confidence 55554 67899999998876 33 34999889999999999999999998899999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|.++...++..|.+++.++.+++++|.+|++.|++. ++++|++++|+||||.+++.++
T Consensus 115 gd----~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~--------~~~~v~i~~p~nptG~~~~~~~ 182 (391)
T 3h14_A 115 GD----RVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL--------DLAGLMVASPANPTGTMLDHAA 182 (391)
T ss_dssp TC----EEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS--------CCSEEEEESSCTTTCCCCCHHH
T ss_pred CC----EEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc--------CCeEEEECCCCCCCCccCCHHH
Confidence 98 99999999999999999999999999998777788999998765 4899999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|+++|+++|+||+|.++.+++. ..+.... ..++++++|+||.+ |++|+|+||++ .+++
T Consensus 183 l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~---------~~~~i~~~s~sK~~-g~~G~r~G~~~---~~~~ 247 (391)
T 3h14_A 183 MGALIEAAQAQGASFISDEIYHGIEYEAK--AVTALEL---------TDECYVINSFSKYF-SMTGWRVGWMV---VPED 247 (391)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBSSSC--CCCGGGT---------CSSSEEEEESSSTT-CCTTSCCEEEE---CCGG
T ss_pred HHHHHHHHHHcCCEEEEECcchhcccCCC--CcChhhc---------CCCEEEEEechhcc-CCccceeEEEE---eCHH
Confidence 99999999999999999999999988653 2333222 12488899999999 79999999998 7889
Q ss_pred HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 260 VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+++.+..... ...+++.+ ++.++..++. ..++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~-----------~~~~~~ 282 (391)
T 3h14_A 248 QVRVVERIAQNMFICAPHA----------------------------------SQVAALAALD-----------CDAELQ 282 (391)
T ss_dssp GHHHHHHHHHHTTCCCCHH----------------------------------HHHHHHHHTT-----------CHHHHH
T ss_pred HHHHHHHHHhhhccCCCHH----------------------------------HHHHHHHHhC-----------ChHHHH
Confidence 9999887665 34456666 4444433332 123478
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
+.++.++++++.+.+.|++++...+..+.+++++|++++.+ + .+...++..+++++||.+.||..|+..
T Consensus 283 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~l~~~~gi~v~~g~~~~~~ 351 (391)
T 3h14_A 283 ANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDL----------T-DDSRAFAAEILEKAGVAVTPGLDFDPE 351 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTT----------C-SCHHHHHHHHHHHHCEECEEGGGTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCcc----------C-CCHHHHHHHHHHHCCEEEcCchhhCCC
Confidence 88899999999999999988333446788899999877521 1 234555677777789999999988761
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
.+.+ ++|++++.++++|++++++|+
T Consensus 352 -----------------------------------------------~~~~--------~iRis~~~~~~~i~~~l~~l~ 376 (391)
T 3h14_A 352 -----------------------------------------------RGAG--------TLRFSYARATADIEEGLDRLE 376 (391)
T ss_dssp -----------------------------------------------TGGG--------EEEEECCSCHHHHHHHHHHHH
T ss_pred -----------------------------------------------CCCC--------eEEEEecCCHHHHHHHHHHHH
Confidence 1122 999999999999999999999
Q ss_pred HHHHHHH
Q psy13922 499 EFHEEFL 505 (509)
Q Consensus 499 ~~~~~~~ 505 (509)
+++++..
T Consensus 377 ~~~~~~~ 383 (391)
T 3h14_A 377 AFMQARG 383 (391)
T ss_dssp HHHHHC-
T ss_pred HHHHHhc
Confidence 9998644
No 16
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=4.7e-41 Score=347.86 Aligned_cols=347 Identities=20% Similarity=0.248 Sum_probs=283.2
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-CcEEEeCCHHHHHHHHHHHhhcCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QDVILSAGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~~~ 104 (509)
.|+.+++++.+.+.+ .....|++..|..++++++++++.+.+|.++++ ++|++|+|+++++..++++++++||
T Consensus 54 ~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd--- 127 (407)
T 3nra_A 54 PTPGAFDLFSAGVQS---GGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGD--- 127 (407)
T ss_dssp CCTTHHHHHHHHHHH---THHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTTC---
T ss_pred CcHHHHHHHHHHHhc---CCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCCC---
Confidence 367899999999987 334459888899999999999999999988766 6999999999999999999999988
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEEecCC----CCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGYYLDE----SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~----~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
.|+++.|+|.++...++..|++++.++.+. +.++.+|++.|++.+++ ++++|++++|+||||.+++.+++
T Consensus 128 -~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~p~nptG~~~~~~~l 201 (407)
T 3nra_A 128 -KVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-----GARVFLFSNPNNPAGVVYSAEEI 201 (407)
T ss_dssp -EEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-----TCCEEEEESSCTTTCCCCCHHHH
T ss_pred -EEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-----CCcEEEEcCCCCCCCcccCHHHH
Confidence 999999999999999999999999999842 24678999999999987 79999999999999999999999
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGV 260 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~ 260 (509)
++|+++|++||+++|+||+|..+.+++. .+.++..+..+ ...+++++.|+||.+ |++|+|+||++ .++++
T Consensus 202 ~~i~~~~~~~~~~li~Dea~~~~~~~g~-~~~~~~~~~~~-----~~~~~i~~~s~sK~~-g~~G~r~G~~~---~~~~~ 271 (407)
T 3nra_A 202 GQIAALAARYGATVIADQLYSRLRYAGA-SYTHLRAEAAV-----DAENVVTIMGPSKTE-SLSGYRLGVAF---GSRAI 271 (407)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTSBCTTC-CCCCGGGCTTS-----CGGGEEEEECSSSTT-CCGGGCCEEEE---ECHHH
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCC-CCCChhhcCcc-----cCCcEEEEeCccccc-CCCeeeEEEEE---cCHHH
Confidence 9999999999999999999999988743 33343332100 123488899999999 79999999998 79999
Q ss_pred HHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 261 KAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 261 ~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
++.+..... ...+.+.+ .+.++..+++.. . +++++
T Consensus 272 ~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~~-------~---~~~~~ 307 (407)
T 3nra_A 272 IARMEKLQAIVSLRAAGY----------------------------------SQAVLRGWFDEA-------P---GWMED 307 (407)
T ss_dssp HHHHHHHHHHHTSSSCHH----------------------------------HHGGGGGTTCCC-------T---THHHH
T ss_pred HHHHHHHHhhhccCCChH----------------------------------HHHHHHHHHhcc-------c---hHHHH
Confidence 999887655 33445555 444444444310 1 22567
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
.++.++++++.+.+.|+++|++.+..+.+++++|+++... + .+...+...+++++||.+.||..|+.
T Consensus 308 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~l~~~~gi~v~~g~~~~~-- 374 (407)
T 3nra_A 308 RIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKL----------A-VAPAEFVKILRLQAGVVVTPGTEFSP-- 374 (407)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCB----------S-SCHHHHHHHHHHHHCEECEEGGGTCT--
T ss_pred HHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCC----------C-CCHHHHHHHHHHhCCEEEeCchhhCC--
Confidence 7788889999999999999899988899999999777521 1 13445556666778999999998875
Q ss_pred CccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHH
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFRE 499 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~ 499 (509)
.+.+ ++|++++.++++|++++++|++
T Consensus 375 ----------------------------------------------~~~~--------~iRis~~~~~~~i~~~~~~l~~ 400 (407)
T 3nra_A 375 ----------------------------------------------HTAD--------SVRLNFSQDHEAAVAAARRIVT 400 (407)
T ss_dssp ----------------------------------------------TCTT--------BEEEECCSCHHHHHHHHHHHHH
T ss_pred ----------------------------------------------CCCC--------EEEEEeCCCHHHHHHHHHHHHH
Confidence 3334 9999999999999999999999
Q ss_pred HHHHHH
Q psy13922 500 FHEEFL 505 (509)
Q Consensus 500 ~~~~~~ 505 (509)
++++++
T Consensus 401 ~~~~~~ 406 (407)
T 3nra_A 401 LVERYR 406 (407)
T ss_dssp HHHHHB
T ss_pred HHHHhh
Confidence 998764
No 17
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=3.5e-41 Score=349.69 Aligned_cols=343 Identities=20% Similarity=0.242 Sum_probs=279.2
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-CcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.+.+ |+.+++++.+++.. ....+|++..|..++|+++++++.+.+|.++++ ++|++|+|+++++..+++++++
T Consensus 55 g~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~ 131 (404)
T 2o1b_A 55 GIPDGPTPQGIIDHFQKALTI---PENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVIN 131 (404)
T ss_dssp CSCSSCCCHHHHHHHHHHTTC---HHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCC
T ss_pred cCCCCCCCHHHHHHHHHHHhC---CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcC
Confidence 44443 68899999888865 224459888889999999999998888887776 7999999999999999999998
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| .|+++.|+|.++...++..|.+++.++.++ .+|.+|++.|++.++. ++++|++++|+||||.++|.+
T Consensus 132 ~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~-----~~~~v~l~~p~nptG~~~~~~ 201 (404)
T 2o1b_A 132 PGD----YVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIID-----KTKLIYLTYPNNPTGSTATKE 201 (404)
T ss_dssp TTC----EEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHH-----HEEEEEECSSCTTTCCCCCHH
T ss_pred CCC----EEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhcc-----CceEEEEcCCCCCCCccCCHH
Confidence 888 999999999999999999999999999876 4577899999999976 699999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|++||+||+|.++.+++ .+.++..+... ..++++++|+||.+ |++|+|+||++ .++
T Consensus 202 ~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~------~~~~i~~~s~sK~~-g~~G~r~G~~~---~~~ 269 (404)
T 2o1b_A 202 VFDEAIAKFKGTDTKIVHDFAYGAFGFDA--KNPSILASENG------KDVAIEIYSLSKGY-NMSGFRVGFAV---GNK 269 (404)
T ss_dssp HHHHHHHHHTTSSCEEEEECTTTTCBSSS--CCCCGGGSTTH------HHHEEEEEESTTTT-TCGGGCCEEEE---ECH
T ss_pred HHHHHHHHHHHcCCEEEEEccchhcccCC--CCCChhhcCCC------CCCEEEEEecchhc-cCchhheEeEe---cCH
Confidence 99999999999999999999999998764 23333332100 12378899999999 78999999998 789
Q ss_pred HHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+...... ..+++.+ .+.++..+++ ...+++
T Consensus 270 ~~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~----------~~~~~~ 305 (404)
T 2o1b_A 270 DMIQALKKYQTHTNAGMFGA----------------------------------LQDAAIYALN----------HYDDFL 305 (404)
T ss_dssp HHHHHHHHHHHHHCCCCCHH----------------------------------HHHHHHHHHH----------HCHHHH
T ss_pred HHHHHHHHHHhhccCCCCHH----------------------------------HHHHHHHHHh----------cCHHHH
Confidence 999998876552 3456666 4444444432 113457
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+++++.++++++.+.+.|+++ ++.+.++++++|+|++++ . +. +..+++..+++++||.+.||..|+.
T Consensus 306 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~--~---------~~-~~~~l~~~l~~~~gi~v~~g~~f~~ 372 (404)
T 2o1b_A 306 EEQSNVFKTRRDRFEAMLAKA-DLPFVHAKGGIYVWLETP--P---------GY-DSEQFEQFLVQEKSILVAPGKPFGE 372 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCEECCCBSSEEEEECC--T---------TC-CHHHHHHHHHHHHCEECEESGGGCG
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCeecCCCcceEEEEeCC--C---------CC-CHHHHHHHHHHHCCEEEeCchhhCc
Confidence 888999999999999999998 888888899999998775 1 22 3455566777788999999988764
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+.+ ++|++++.++++|++++++|
T Consensus 373 ------------------------------------------------~~~~--------~iRis~~~~~e~l~~~l~~l 396 (404)
T 2o1b_A 373 ------------------------------------------------NGNR--------YVRISLALDDQKLDEAAIRL 396 (404)
T ss_dssp ------------------------------------------------GGTT--------EEEEECCSCTTHHHHHHHHH
T ss_pred ------------------------------------------------CCCC--------eEEEEEcCCHHHHHHHHHHH
Confidence 2223 99999998899999999999
Q ss_pred HHHHH
Q psy13922 498 REFHE 502 (509)
Q Consensus 498 ~~~~~ 502 (509)
+++++
T Consensus 397 ~~~l~ 401 (404)
T 2o1b_A 397 TELAY 401 (404)
T ss_dssp HGGGG
T ss_pred HHHHH
Confidence 98874
No 18
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=5.4e-41 Score=345.33 Aligned_cols=349 Identities=15% Similarity=0.232 Sum_probs=282.9
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ |+.+++++.+.+.+ ... .|++. ..++++++++++.+.+|+++++++|++|+|+++++..++++++++
T Consensus 35 ~~~~~~~~~~v~~a~~~~~~~---~~~-~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~ 108 (391)
T 3dzz_A 35 AEMDFKIAPEIMASMEEKLKV---AAF-GYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSP 108 (391)
T ss_dssp SCCSSCCCHHHHHHHHHHHTT---CCC-CCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCT
T ss_pred cCCCCCCCHHHHHHHHHHHhc---CcC-CCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCC
Confidence 55655 68999999998877 333 37766 489999999999999998888999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC-CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD-ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
|| +|+++.|+|.++...++..|.+++.++.+ ++++|.+|++.|++.+++. ++++|++++|+||||.++|.+
T Consensus 109 gd----~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~----~~~~v~i~~p~nptG~~~~~~ 180 (391)
T 3dzz_A 109 GD----QILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATP----SVRMMVFCNPHNPIGYAWSEE 180 (391)
T ss_dssp TC----EEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTST----TEEEEEEESSBTTTTBCCCHH
T ss_pred CC----eEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhcc----CceEEEEECCCCCCCcccCHH
Confidence 88 99999999999999999999999999986 3445679999999999842 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|+++|+||+|.++.+.+. .+.++..+..+. ..+++++.|+||.+ |++|+|+||++. .++
T Consensus 181 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~-----~d~~i~~~s~sK~~-g~~G~r~G~~~~--~~~ 251 (391)
T 3dzz_A 181 EVKRIAELCAKHQVLLISDEIHGDLVLTDE-DITPAFTVDWDA-----KNWVVSLISPSKTF-NLAALHAACAII--PNP 251 (391)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCCGGGSCTTT-----GGGEEEEECSHHHH-TCTTTCCEEEEC--CSH
T ss_pred HHHHHHHHHHHCCCEEEEecccccccCCCC-CceehhhcCccc-----cCcEEEEEeChhhc-cccchhheEEEE--CCH
Confidence 999999999999999999999999988643 334444332110 12488899999999 799999999982 349
Q ss_pred HHHHHHHHhhh--cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 259 GVKAMLHKSIS--AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 259 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
++++.+..... ...+++.+ ++.++..++. ...++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~----------~~~~~ 287 (391)
T 3dzz_A 252 DLRARAEESFFLAGIGEPNLL----------------------------------AIPAAIAAYE----------EGHDW 287 (391)
T ss_dssp HHHHHHHHHHHHHTCSSCCTT----------------------------------HHHHHHHHHH----------HCHHH
T ss_pred HHHHHHHHHHHhhccCCCCHH----------------------------------HHHHHHHHHh----------ccHHH
Confidence 99999987643 33455555 4444433322 12344
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNS-IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
++++++.++++++.+.+.|++ +|++.+..+.+++++|++++.. +. +...+...+++++||.+.||..|
T Consensus 288 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~l~~~~gi~v~~g~~~ 356 (391)
T 3dzz_A 288 LRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISAL----------GM-NAEDFCKYLREKTGLIISAGNGY 356 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGG----------CS-CHHHHHHHHHHHHCEECEESGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhc----------CC-CHHHHHHHHHHhCCEEEeCchhh
Confidence 788899999999999999999 8999999999999999877511 12 34555556667899999999988
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+. .+.+ ++|++++.++++|+++++
T Consensus 357 ~~------------------------------------------------~~~~--------~iRis~~~~~~~i~~~l~ 380 (391)
T 3dzz_A 357 RG------------------------------------------------NGHE--------FVRINLACPKELVIDGMQ 380 (391)
T ss_dssp CT------------------------------------------------TGGG--------EEEEECCSCHHHHHHHHH
T ss_pred CC------------------------------------------------CCCC--------EEEEEecCCHHHHHHHHH
Confidence 76 3333 999999999999999999
Q ss_pred HHHHHHHHH
Q psy13922 496 KFREFHEEF 504 (509)
Q Consensus 496 ~l~~~~~~~ 504 (509)
+|+++++++
T Consensus 381 ~l~~~l~~~ 389 (391)
T 3dzz_A 381 RLKQGVLNL 389 (391)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998654
No 19
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.3e-41 Score=351.56 Aligned_cols=348 Identities=19% Similarity=0.306 Sum_probs=274.7
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-CcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-QDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.|.+ |+.+++++.+.+.. ....+|++..|..++|+++++++.+.+|.++++ ++|++|+|+++++..+++++++
T Consensus 45 g~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~ 121 (412)
T 2x5d_A 45 GNPDGPTPPHIVEKLCTVAQR---EDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLD 121 (412)
T ss_dssp CCCCSCCCHHHHHHHHHTC------------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHhC---CCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCC
Confidence 44443 68899998888776 224459888899999999999999888887788 7999999999999999999998
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| .|+++.|+|.++...++..|.+++.++.+++.+|.+|++.|++.++. ++++|++++||||||.++|.+
T Consensus 122 ~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~-----~~~~v~l~~p~nptG~~~~~~ 192 (412)
T 2x5d_A 122 HGD----TILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIP-----KPRMMILGFPSNPTAQCVELD 192 (412)
T ss_dssp TTC----EEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEES-----CCSEEEEESSCTTTCCCCCHH
T ss_pred CCC----EEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhccc-----CceEEEECCCCCCCCCcCCHH
Confidence 888 99999999999999999999999999988654566788999888765 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|+++|+||+|.++.+++. .+.++.++... ..++++++|+||.+ |++|+|+||++ .++
T Consensus 193 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~------~~~~i~~~s~sK~~-~~~G~r~G~~~---~~~ 261 (412)
T 2x5d_A 193 FFERVVALAKQYDVMVVHDLAYADIVYDGW-KAPSIMQVPGA------KDIAVEFFTLSKSY-NMAGWRIGFMV---GNP 261 (412)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTCBCTTC-CCCCGGGSTTG------GGTEEEEEECC-CC-SCTTSCCEEEE---ECH
T ss_pred HHHHHHHHHHHcCCEEEEeccccccccCCC-CCCChhhccCc------cCcEEEEecCcccc-CCcccceEEEE---cCH
Confidence 999999999999999999999999987542 23344333110 12488899999999 79999999998 689
Q ss_pred HHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+..... ...+++.+ .+.++..+++. ..+++
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~----------~~~~~ 297 (412)
T 2x5d_A 262 ELVSALARIKSYHDYGTFTP----------------------------------LQVAAIAALEG----------DQQCV 297 (412)
T ss_dssp HHHHHHHHHHHHHCCCCCHH----------------------------------HHHHHHHHHHS----------CSHHH
T ss_pred HHHHHHHHHHhhhccCCCHH----------------------------------HHHHHHHHHhC----------CHHHH
Confidence 99999887655 23455666 44444333321 11347
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCC--CCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGK--CPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
+++++.++++++.+.+.|+++ ++.+.++++++|+|++++ . ++ .+...++..+++++||.+.||..|
T Consensus 298 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~--~---------~~~~~~~~~~~~~l~~~~gi~v~~g~~f 365 (412)
T 2x5d_A 298 RDIARQYQQRRDVLVKGLREA-GWMVENPKASMYVWAKIP--E---------PYAHLGSLEFAKKLLQDAKVSVSPGIGF 365 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCCCCCCSBSSEEEEECC--T---------TTGGGCHHHHHHHHHHHHCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCEecCCCeeeEEEEEcC--C---------ccCCCCHHHHHHHHHHHCCEEEeCchhh
Confidence 888899999999999999988 888888899999997774 1 11 134555666777789999999887
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+. .+.+ ++|++++.++++|+++++
T Consensus 366 ~~------------------------------------------------~~~~--------~iRis~~~~~~~l~~~l~ 389 (412)
T 2x5d_A 366 GD------------------------------------------------YGDD--------HVRFALIENRDRLRQAVR 389 (412)
T ss_dssp CG------------------------------------------------GGTT--------EEEEECCSCHHHHHHHHH
T ss_pred CC------------------------------------------------CCCC--------eEEEEecCCHHHHHHHHH
Confidence 54 2223 999999999999999999
Q ss_pred HHHHHHHHH
Q psy13922 496 KFREFHEEF 504 (509)
Q Consensus 496 ~l~~~~~~~ 504 (509)
+|.++++++
T Consensus 390 ~l~~~l~~~ 398 (412)
T 2x5d_A 390 GIKAMFRAD 398 (412)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999998764
No 20
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=7.9e-41 Score=349.32 Aligned_cols=333 Identities=20% Similarity=0.290 Sum_probs=266.3
Q ss_pred cCCCCcchHHHHHHHHHHHhhhcCCCCC-------CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH
Q psy13922 48 SYTDSPGIEIIRRHVAQYISRRDGQPAD-------WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS 120 (509)
Q Consensus 48 ~Y~~~~g~~~lr~~va~~l~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~ 120 (509)
+|++..|.+++|+++++++.+.+|+..+ +++|++|+|+++++..++++++++|| .|+++.|+|.++...
T Consensus 73 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd----~Vlv~~p~y~~~~~~ 148 (425)
T 2r2n_A 73 QYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD----NVLLDEPAYSGTLQS 148 (425)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTC----EEEEESSCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCC----EEEEeCCCcHHHHHH
Confidence 4999999999999999999988887764 37999999999999999999999998 999999999999999
Q ss_pred HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh-------ccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCc
Q psy13922 121 LAEFNMEQIGYYLDESKQWGLPISELERSITEAR-------KHCNPRAIVI-INPGNPTGQVLTKENIQDIIKFAHREKL 192 (509)
Q Consensus 121 ~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~-------~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~~i 192 (509)
++..|++++.++.+++ ++|++.|++.+++.. ...++++|++ ++||||||.++|.+++++|+++|++||+
T Consensus 149 ~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~ 225 (425)
T 2r2n_A 149 LHPLGCNIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225 (425)
T ss_dssp HGGGTCEEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHcCCEEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCC
Confidence 9999999999998754 589999999987311 0125888877 7999999999999999999999999999
Q ss_pred EEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cc
Q psy13922 193 FLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AM 271 (509)
Q Consensus 193 ~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~ 271 (509)
+||+||+|.++.+++. .+.++.++.. ..++++++||||.+ | +|+|+||++ .++++++.+..... ..
T Consensus 226 ~li~De~~~~~~~~g~-~~~~~~~~~~-------~~~~i~~~s~SK~~-~-~GlRiG~~~---~~~~l~~~l~~~~~~~~ 292 (425)
T 2r2n_A 226 LIIEDDPYYFLQFNKF-RVPTFLSMDV-------DGRVIRADSFSKII-S-SGLRIGFLT---GPKPLIERVILHIQVST 292 (425)
T ss_dssp EEEEECTTGGGBSSSS-CCCCTGGGCT-------TSCEEEEEESTTTT-C-STTCCEEEE---EEHHHHHHHHHHHHTTT
T ss_pred EEEEECCcccccCCCC-CCCCccccCC-------CCCEEEEccchhhc-c-CccceEEEe---cCHHHHHHHHHHHHHhc
Confidence 9999999999988643 3344444321 23589999999999 7 999999998 68899999987665 34
Q ss_pred cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q psy13922 272 LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMV 351 (509)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 351 (509)
.+++.+ .|.++..+++. ..-..+.++++++++.++++++.+
T Consensus 293 ~~~~~~----------------------------------~q~a~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~l 333 (425)
T 2r2n_A 293 LHPSTF----------------------------------NQLMISQLLHE-----WGEEGFMAHVDRVIDFYSNQKDAI 333 (425)
T ss_dssp CSSCHH----------------------------------HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHH----------------------------------HHHHHHHHHHh-----cccchHHHHHHHHHHHHHHHHHHH
Confidence 566666 45444444330 000224466889999999999999
Q ss_pred HHHHhc-CCCC-eeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchh
Q psy13922 352 ADTFNS-IEGM-SCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVW 429 (509)
Q Consensus 352 ~~~L~~-~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~ 429 (509)
.+.|++ +|++ .+..+.+++|+|++++ +..++..++...+.++||.+.||..|+....
T Consensus 334 ~~~L~~~~~~~~~~~~p~~g~~~~~~~~------------~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~--------- 392 (425)
T 2r2n_A 334 LAAADKWLTGLAEWHVPAAGMFLWIKVK------------GINDVKELIEEKAVKMGVLMLPGNAFYVDSS--------- 392 (425)
T ss_dssp HHHHHHHCSSSEEECCCSBSSEEEEEET------------TCSCCHHHHHTHHHHTTEECEEGGGGSSSTT---------
T ss_pred HHHHHHHCCCCeEEeCCCceEEEEEEeC------------CCCCHHHHHHHHHHHCCcEEechhhhcCCCC---------
Confidence 999988 6776 4667899999998775 1113444446677789999999998876100
Q ss_pred hhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHHH
Q psy13922 430 WRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~ 504 (509)
.+.+ ++||+++ .++++|++++++|++++++.
T Consensus 393 ------------------------------------~~~~--------~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 393 ------------------------------------APSP--------YLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp ------------------------------------SCCC--------EEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCC--------EEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 1223 9999998 89999999999999998653
No 21
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-40 Score=343.00 Aligned_cols=359 Identities=18% Similarity=0.259 Sum_probs=282.2
Q ss_pred HHHHHHHhhcCCCCC----CCCC--CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cE
Q psy13922 7 LSLQVLALVSLPQLF----DDPR--FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DV 79 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~----~~~~--~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i 79 (509)
.++.+..+...+.++ +.|. .|+.+.+++.+.+.. . ...|++..|..++|+++++++.+.+|.+++++ +|
T Consensus 19 ~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~---~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v 94 (386)
T 1u08_A 19 IFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAHHVAQ---G-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDI 94 (386)
T ss_dssp HHHHHHHHHHHTTCEECCCSSCSSCCCHHHHHHHHHHHHT---T-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTE
T ss_pred HHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHHh---h-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCE
Confidence 344444444333332 4443 468999999998876 2 34598888899999999999998888888898 99
Q ss_pred EEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCc
Q psy13922 80 ILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNP 159 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~ 159 (509)
++|+|+++++..++++++++|| .|+++.|+|.++...++..|.+++.++.+++ +|.+|++.|++.+++ ++
T Consensus 95 ~~~~g~~~a~~~~~~~~~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~-----~~ 164 (386)
T 1u08_A 95 TVTAGATEALYAAITALVRNGD----EVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSE-----RT 164 (386)
T ss_dssp EEESSHHHHHHHHHHHHCCTTC----EEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCT-----TE
T ss_pred EEcCChHHHHHHHHHHhCCCCC----EEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcc-----cC
Confidence 9999999999999999988888 9999999999999999999999999998754 578999999999865 79
Q ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 160 RAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 160 ~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
++|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++. .+.++..+... ..++++++|+||.
T Consensus 165 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~------~~~~i~~~s~sK~ 237 (386)
T 1u08_A 165 RLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQ-GHASVLAHPQL------RERAVAVSSFGKT 237 (386)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSS-CCCCGGGSHHH------HTTEEEEEEHHHH
T ss_pred EEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCC-CCcChhcccCc------cCcEEEEecchhh
Confidence 9999999999999999999999999999999999999999999988643 23333332111 1237889999999
Q ss_pred cCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhc
Q psy13922 240 YMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDC 318 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 318 (509)
+ |++|+|+||++ .++++++.+..... ..++.+.+ .+.++..
T Consensus 238 ~-~~~G~r~G~~~---~~~~~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~ 279 (386)
T 1u08_A 238 Y-HMTGWKVGYCV---APAPISAEIRKVHQYLTFSVNTP----------------------------------AQLALAD 279 (386)
T ss_dssp T-TCGGGCCEEEE---CCHHHHHHHHHHHHHHTSSCCHH----------------------------------HHHHHHH
T ss_pred c-CCcccceEEEE---cCHHHHHHHHHHHHhhccCCChH----------------------------------HHHHHHH
Confidence 9 78999999998 78999998887654 23455555 3444433
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHH
Q psy13922 319 VVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYA 398 (509)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 398 (509)
+++ ...++++++++.++++++.+.+.|+++ |+.+..+++++++|++++-. +..+..++.
T Consensus 280 ~l~----------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~ 338 (386)
T 1u08_A 280 MLR----------AEPEHYLALPDFYRQKRDILVNALNES-RLEILPCEGTYFLLVDYSAV----------STLDDVEFC 338 (386)
T ss_dssp HHH----------HCTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCCCBSSEEEEECTTT----------CCSCHHHHH
T ss_pred HHh----------CCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCceEEEEEecCCC----------CCCCHHHHH
Confidence 332 112347788999999999999999998 88888888899999877511 001345555
Q ss_pred HHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCcee
Q psy13922 399 FELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYH 478 (509)
Q Consensus 399 ~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (509)
..+++++||.+.||..|...+ .+.+ +
T Consensus 339 ~~l~~~~gi~v~~g~~f~~~~----------------------------------------------~~~~--------~ 364 (386)
T 1u08_A 339 QWLTQEHGVAAIPLSVFCADP----------------------------------------------FPHK--------L 364 (386)
T ss_dssp HHHHHHSCEECEEGGGGCSSC----------------------------------------------CCSC--------E
T ss_pred HHHHHhCCEEEeCchHhCCCC----------------------------------------------CCCC--------E
Confidence 667778899999998776410 1122 8
Q ss_pred EEEEeecChHHHHHHHHHHHH
Q psy13922 479 FRTTILPQPEKLKAMLEKFRE 499 (509)
Q Consensus 479 ~Rls~~~~~~~i~~~~~~l~~ 499 (509)
+|++++.++++|++++++|++
T Consensus 365 iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 365 IRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp EEEECCSCHHHHHHHHHHHTT
T ss_pred EEEEEcCCHHHHHHHHHHHhh
Confidence 999999999999999999864
No 22
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=8.5e-41 Score=342.87 Aligned_cols=345 Identities=17% Similarity=0.267 Sum_probs=281.9
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.+.+ |+.+.+++.+.+.+ ... .|++. ..++++++++++.+.+|.++++++|++|+|+++++..++++++++
T Consensus 32 ~~~~~~~~~~v~~a~~~~~~~---~~~-~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~~ 105 (383)
T 3kax_A 32 ADMDFEVPQPIQTALKKRIEH---PIF-GYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKE 105 (383)
T ss_dssp SSCSSCCCHHHHHHHHHHHHS---CCC-CCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCCT
T ss_pred ccCCCCCCHHHHHHHHHHHhc---CCC-CCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCCC
Confidence 56665 68999999999877 333 37765 478999999999999998888999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCC-CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDES-KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
|| +|+++.|+|.++...++..|.+++.++.+++ ++|.+|++.|++.++. ++++|++++|+||||.++|.+
T Consensus 106 gd----~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~v~i~~p~nptG~~~~~~ 176 (383)
T 3kax_A 106 NE----SVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ-----GVKLMLLCSPHNPIGRVWKKE 176 (383)
T ss_dssp TC----EEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT-----TCCEEEEESSBTTTTBCCCHH
T ss_pred CC----EEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc-----CCeEEEEeCCCCCCCcCcCHH
Confidence 88 9999999999999999999999999998753 3467999999999954 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|+++|+||+|.++.+++. .+.++..+..+.. .++++++|+||.+ |++|+|+||++. .++
T Consensus 177 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~-----~~~i~~~s~sK~~-~~~G~r~G~~~~--~~~ 247 (383)
T 3kax_A 177 ELTKLGSLCTKYNVIVVADEIHSDIIYADH-THTPFASLSEELA-----ARTITCMAPSKTF-NIAGLQASIIII--PNE 247 (383)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTCBCTTC-CCCCGGGSCHHHH-----TTEEEEECSHHHH-TCGGGCCEEEEC--CCH
T ss_pred HHHHHHHHHHHCCCEEEEEccccccccCCC-CceeHhhcCcccc-----CcEEEEEEChhhc-cCcchhheEEEe--CCH
Confidence 999999999999999999999999988643 3344444332211 2388899999999 799999999972 478
Q ss_pred HHHHHHHHhhhc--ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 259 GVKAMLHKSISA--MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 259 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
++++.+...... +.+++.+ ++.++..++.. ..++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~----------~~~~ 283 (383)
T 3kax_A 248 KLRQAFTSIQYRQGFHGLNIF----------------------------------AYTAMQSAYTE----------CNDW 283 (383)
T ss_dssp HHHHHHHHHHHHTTCCCCCHH----------------------------------HHHHHHHHTTT----------CHHH
T ss_pred HHHHHHHHHHhhcccCCCCHH----------------------------------HHHHHHHHHHh----------hHHH
Confidence 999998876552 3356666 45554444431 1234
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNS-IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
++++++.++++++.+.+.|++ +|++.+..+.+++++|++++.+ +. +...+...+++++||.++||..|
T Consensus 284 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~l~~~~gi~v~~g~~~ 352 (383)
T 3kax_A 284 LNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSAL----------NL-SQDERTKLLEEKGKIIVEPGEKY 352 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGG----------CC-CHHHHHHHHHHTSCEECEESGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEcccc----------CC-CHHHHHHHHHhhCCEEeECchhh
Confidence 788889999999999999998 7899999999999999877521 22 34555566666899999999988
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+. .+.+ ++|++++.++++|+++++
T Consensus 353 ~~------------------------------------------------~~~~--------~iRi~~~~~~~~i~~~l~ 376 (383)
T 3kax_A 353 GL------------------------------------------------GGEE--------HIGINIGCPRSVLEEILN 376 (383)
T ss_dssp CT------------------------------------------------TCTT--------EEEEECSSCHHHHHHHHH
T ss_pred cC------------------------------------------------CCCC--------eEEEEEcCCHHHHHHHHH
Confidence 77 3434 999999999999999999
Q ss_pred HHHHHH
Q psy13922 496 KFREFH 501 (509)
Q Consensus 496 ~l~~~~ 501 (509)
+|++++
T Consensus 377 ~l~~~l 382 (383)
T 3kax_A 377 RLRHTF 382 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999876
No 23
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=9.5e-41 Score=342.07 Aligned_cols=339 Identities=18% Similarity=0.233 Sum_probs=271.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.+.+ |+.+++++.+.+. ...+|++..|..++|+++++++.+.+|+++++++|++|+|+++++..++++++++
T Consensus 31 ~~~~~~~~~~v~~a~~~~~~-----~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~ 105 (376)
T 3ezs_A 31 GEPQFETPKFIQDALKNHTH-----SLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFD 105 (376)
T ss_dssp CCCCSCCCHHHHHHHHTTGG-----GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTT
T ss_pred CCCCCCCCHHHHHHHHHhhh-----hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCC
Confidence 45554 6788888877763 2455999889999999999999998898788999999999999999999999998
Q ss_pred --CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 100 --VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 100 --gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
|| +|+++.|+|.++...++..|.+++.++.+++.++.+ .+++.+.+ ++++|++++||||||.+++.
T Consensus 106 ~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~l~~~~~~-----~~~~v~~~~p~nptG~~~~~ 173 (376)
T 3ezs_A 106 YQNP----TIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP---SLNEKELQ-----EVDLVILNSPNNPTGRTLSL 173 (376)
T ss_dssp CSSC----EEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC---CCCHHHHH-----HCSEEEECSSCTTTCCCCCH
T ss_pred CCCC----EEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch---hHHhhhcc-----CCCEEEEcCCCCCcCCCCCH
Confidence 88 999999999999999999999999999987654444 66667766 68999999999999999999
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++++|+++|+++|+++|+||+|.++.+++ ...++.......+. +...++++++|+||.+ |++|+|+||++ .+
T Consensus 174 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~-g~~G~r~G~~~---~~ 246 (376)
T 3ezs_A 174 EELISWVKLALKHDFILINDECYSEIYENT--PPPSLLEACMLAGN-EAFKNVLVIHSLSKRS-SAPGLRSGFIA---GD 246 (376)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBSSS--CCCCHHHHHHHTTC-TTCTTEEEEEESTTTT-TCGGGCCEEEE---EC
T ss_pred HHHHHHHHHHHHcCcEEEEEccchhhccCC--CCCCHHHccccccc-cccCcEEEEecchhcc-CCccceeEEEe---eC
Confidence 999999999999999999999999998875 44555554321110 0123488899999999 79999999998 79
Q ss_pred HHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 258 PGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 258 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
+++++.+..... ...+.+.+ .+.++..+++. .++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~-----------~~~ 281 (376)
T 3ezs_A 247 SRLLEKYKAFRAYLGYTSANA----------------------------------IQKASEAAWLD-----------DRH 281 (376)
T ss_dssp HHHHHHHHHHHTTTCCCCCHH----------------------------------HHHHHHHHHHC-----------SHH
T ss_pred HHHHHHHHHHHhhhcCCCChH----------------------------------HHHHHHHHHhC-----------cHH
Confidence 999999987765 24456666 44444444331 123
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
+++.++.++++++.+.+.|+ ++. .+.+++++|++++ +...++..+++++||.+.||..|+
T Consensus 282 ~~~~~~~~~~~~~~l~~~l~---~~~--~~~~~~~~~~~~~---------------~~~~~~~~l~~~~gi~v~~g~~~~ 341 (376)
T 3ezs_A 282 AEFFRNIYANNLKLARKIFK---NTL--IYPYSFYVYLPVQ---------------NGENFAKTLYQNEGIITLPALYLG 341 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHST---TCC--CCSBSSEEEEECS---------------CHHHHHHHHHHHHCCBCEEGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHhc---CCC--CCCcceEEEEECC---------------CHHHHHHHHHHhCCEEEeCcHHhC
Confidence 78888999999999999987 444 6788999997765 234445666666899999999887
Q ss_pred CCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHH
Q psy13922 417 QVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEK 496 (509)
Q Consensus 417 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~ 496 (509)
... .+.+ ++||+++.++++|++++++
T Consensus 342 ~~~----------------------------------------------~~~~--------~iRis~~~~~~~i~~~l~~ 367 (376)
T 3ezs_A 342 RNR----------------------------------------------IGAD--------YVRLALVYDTPLLEKPLEI 367 (376)
T ss_dssp STT----------------------------------------------TTTT--------EEEEECCSCHHHHHHHHHH
T ss_pred CCC----------------------------------------------CCCC--------eEEEEEcCCHHHHHHHHHH
Confidence 410 2223 9999999999999999999
Q ss_pred HHHHHHH
Q psy13922 497 FREFHEE 503 (509)
Q Consensus 497 l~~~~~~ 503 (509)
|++++++
T Consensus 368 l~~~l~~ 374 (376)
T 3ezs_A 368 IETYREN 374 (376)
T ss_dssp HHHHHCC
T ss_pred HHHHHHh
Confidence 9998854
No 24
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.1e-40 Score=344.51 Aligned_cols=352 Identities=18% Similarity=0.292 Sum_probs=279.2
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.+.+ |+.+.+++.+.+.. . ...|++. ..++|+++++++.+++|+++++++|++|+|+++++..++++++++
T Consensus 39 ~~~~~~~~~~v~~a~~~~~~~---~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~ 112 (399)
T 1c7n_A 39 ADMEFKNPPELIEGLKKYLDE---T-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKP 112 (399)
T ss_dssp SSCSSCCCHHHHHHHHHHHHH---C-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCT
T ss_pred cCCCCCCCHHHHHHHHHHHhc---C-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCC
Confidence 44443 67899999998875 2 3348765 699999999999988888788899999999999999999999988
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC-CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD-ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
|| +|+++.|+|.++...++..|.+++.+|.+ ++++|.+|++.|++.+++. ++++|++++|+||||.++|.+
T Consensus 113 gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~~~ 184 (399)
T 1c7n_A 113 GD----GVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDK----NNKALLFCSPHNPVGRVWKKD 184 (399)
T ss_dssp TC----EEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCT----TEEEEEEESSBTTTTBCCCHH
T ss_pred CC----EEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccC----CCcEEEEcCCCCCCCcCcCHH
Confidence 88 99999999999999999999999999986 3334679999999999732 789999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|+++|+||+|.++.+++. .+.++..+..+. ..+++++.|+||.+ |++|+|+||+++ .++
T Consensus 185 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~-----~~~~i~~~s~sK~~-~~~G~r~G~~~~--~~~ 255 (399)
T 1c7n_A 185 ELQKIKDIVLKSDLMLWSDEIHFDLIMPGY-EHTVFQSIDEQL-----ADKTITFTAPSKTF-NIAGMGMSNIII--KNP 255 (399)
T ss_dssp HHHHHHHHHHHSSCEEEEECTTTTCBCTTC-CCCCGGGSCHHH-----HTTEEEEECSHHHH-TCGGGCCEEEEC--CCH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCC-CcccHHHcCccc-----cCcEEEEEeChhhc-cccchheEEEEE--CCH
Confidence 999999999999999999999999987643 233443332111 12388899999999 799999999983 357
Q ss_pred HHHHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 259 GVKAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 259 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
++++.+......+ .+++.+ ++.++..+++ ...++
T Consensus 256 ~~~~~l~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~----------~~~~~ 291 (399)
T 1c7n_A 256 DIRERFTKSRDATSGMPFTTL----------------------------------GYKACEICYK----------ECGKW 291 (399)
T ss_dssp HHHHHHHHHHHHTTCCCCCHH----------------------------------HHHHHHHHHH----------HCHHH
T ss_pred HHHHHHHHHHhhcccCCCCHH----------------------------------HHHHHHHHHh----------CChHH
Confidence 8999888765533 245666 4444443332 11345
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNS-IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
++++++.++++++.+.+.|++ +|++.+.++.+++++|++++. .+. +...+...+++++||.+.||..|
T Consensus 292 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~l~~~~gi~v~~g~~~ 360 (399)
T 1c7n_A 292 LDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRA----------LKM-DHKAMEEFMIHKAQIFFDEGYIF 360 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGG----------GCC-CHHHHHHHHHHTTCCCCEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEccc----------CCC-CHHHHHHHHHHhCCEEEeCcccc
Confidence 788899999999999999998 889988889999999977741 011 24455555656889999999877
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+. .+.+ ++|++++.++++|+++++
T Consensus 361 ~~------------------------------------------------~~~~--------~iRis~~~~~~~l~~~l~ 384 (399)
T 1c7n_A 361 GD------------------------------------------------GGIG--------FERINLAAPSSVIQESLE 384 (399)
T ss_dssp CG------------------------------------------------GGTT--------EEEEECCSCHHHHHHHHH
T ss_pred CC------------------------------------------------CCCC--------eEEEEeccCHHHHHHHHH
Confidence 64 2223 999999988999999999
Q ss_pred HHHHHHHHHHhh
Q psy13922 496 KFREFHEEFLAK 507 (509)
Q Consensus 496 ~l~~~~~~~~~~ 507 (509)
+|++++++++++
T Consensus 385 ~l~~~l~~~~~~ 396 (399)
T 1c7n_A 385 RLNKALKDLKNR 396 (399)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHHHhc
Confidence 999999887654
No 25
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-40 Score=341.55 Aligned_cols=339 Identities=20% Similarity=0.292 Sum_probs=272.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.+.+ |+.+.+++.+.+.. ....+|++..|..++|+++++++.+.+|.+++++ +|++|+|+++++..+++++++
T Consensus 33 ~~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~ 109 (376)
T 2dou_A 33 GSTDLPPPEAPLKALAEALND---PTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTE 109 (376)
T ss_dssp CCCCCCCCHHHHHHHHHHTTC---GGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHhC---CCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcC
Confidence 44443 78899999888876 2345698877889999999999998889877777 999999999999999999998
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| +|+++.|+|.++...++..|.+++.+|. +.+|.+|++.|++.++. ++++|++++||||||.++|.+
T Consensus 110 ~gd----~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~-----~~~~v~l~~p~nptG~~~~~~ 178 (376)
T 2dou_A 110 PED----LLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWR-----EAKVLLLNYPNNPTGAVADWG 178 (376)
T ss_dssp TTC----EEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHH-----HEEEEEECSSCTTTCCCCCHH
T ss_pred CCC----EEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhcc-----CceEEEECCCCCCcCccCCHH
Confidence 888 9999999999999999999999999998 33567899999999976 699999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|+++|+||+|.++.+++ ...++...... ..++++++|+||.+ |++|+|+||++ .++
T Consensus 179 ~l~~l~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~------~~~~i~~~s~sK~~-~~~G~r~G~~~---~~~ 246 (376)
T 2dou_A 179 YFEEALGLARKHGLWLIHDNPYVDQVYEG--EAPSPLALPGA------KERVVELFSLSKSY-NLAGFRLGFAL---GSE 246 (376)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTGGGBSSS--CCCCGGGSTTG------GGTEEEEEEHHHHH-TCGGGCCEEEE---ECH
T ss_pred HHHHHHHHHHHcCCEEEEEccchhcccCC--CCCChhhcCCC------CCcEEEEecchhhc-CChhheeEEEe---cCH
Confidence 99999999999999999999999998764 22233222110 22488899999999 78999999998 799
Q ss_pred HHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 259 GVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 259 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++++.+...... ..+.+.+ .+.++..+++. ..+++
T Consensus 247 ~~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~----------~~~~~ 282 (376)
T 2dou_A 247 EALARLERVKGVIDFNQYAG----------------------------------VLRMGVEALKT----------PKEVV 282 (376)
T ss_dssp HHHHHHHHHHHHHCCCSCHH----------------------------------HHHHHHHHHTS----------CHHHH
T ss_pred HHHHHHHHHHHhcccCCCHH----------------------------------HHHHHHHHHhC----------cHHHH
Confidence 999999876552 3345555 44444444431 12347
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++.++.++++++.+.+.|+++ +.+.++.+++++|++++ . +. +...+...++++ ||.+.||..|+.
T Consensus 283 ~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~--~---------~~-~~~~~~~~l~~~-gi~v~~g~~f~~ 347 (376)
T 2dou_A 283 RGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLP--E---------GV-DDLEFGLRLVER-GVALAPGRGFGP 347 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECC--T---------TC-CHHHHHHHHHHT-TEECEEGGGGCG
T ss_pred HHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECC--C---------CC-CHHHHHHHHHHC-CEEEcCchhhCC
Confidence 888999999999999999887 77778889999997775 1 11 234555555555 999999987764
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+.+ ++|++++.++++|++++++|
T Consensus 348 ------------------------------------------------~~~~--------~~Ris~~~~~~~i~~~l~~l 371 (376)
T 2dou_A 348 ------------------------------------------------GGKG--------FVRIALVRPLEELLEAAKRI 371 (376)
T ss_dssp ------------------------------------------------GGTT--------EEEEECCSCHHHHHHHHHHH
T ss_pred ------------------------------------------------CCCC--------eEEEEecCCHHHHHHHHHHH
Confidence 2223 99999998899999999999
Q ss_pred HHHH
Q psy13922 498 REFH 501 (509)
Q Consensus 498 ~~~~ 501 (509)
++++
T Consensus 372 ~~~l 375 (376)
T 2dou_A 372 REAL 375 (376)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 8764
No 26
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.3e-41 Score=346.94 Aligned_cols=377 Identities=21% Similarity=0.270 Sum_probs=287.8
Q ss_pred HHHHHHHHhhcCCCCC----CCCC--CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-c
Q psy13922 6 SLSLQVLALVSLPQLF----DDPR--FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-D 78 (509)
Q Consensus 6 ~~~~~~~~~~~~~~~~----~~~~--~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~ 78 (509)
+.++.+..+...++.+ +.+. .|+.+.+++.+++.. . ...|++..|..++|+++++++.+.+|.+++++ +
T Consensus 13 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~---~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~ 88 (411)
T 2o0r_A 13 TVFAEMSALATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAG---G-VNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETE 88 (411)
T ss_dssp CHHHHHHHHHHTTTCEESSCSSCSSCCCHHHHHHHHHHHHT---T-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTS
T ss_pred cHHHHHHHHhhcCCeeeccCcCCCCCCCHHHHHHHHHHHhc---C-CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCce
Confidence 3556666666555543 4444 468999999999876 2 34599888899999999999998889888888 9
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCC-CCCCCCHHHHHHHHHhhhccC
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDES-KQWGLPISELERSITEARKHC 157 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~L~~~i~~~~~~~ 157 (509)
|++|+|+++++..++++++++|| .|+++.|+|.++...++..|.+++.++.+++ .+|.+|++.|++.+++
T Consensus 89 v~~t~g~~~al~~~~~~~~~~gd----~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~----- 159 (411)
T 2o0r_A 89 VLVTVGATEAIAAAVLGLVEPGS----EVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTP----- 159 (411)
T ss_dssp EEEEEHHHHHHHHHHHHHCCTTC----EEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCT-----
T ss_pred EEEeCCHHHHHHHHHHHhcCCCC----EEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhcc-----
Confidence 99999999999999999998888 9999999999999999999999999998654 3467999999999876
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 158 NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. .+.++..+.. ...+++++.|+|
T Consensus 160 ~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~------~~~~~i~~~s~s 232 (411)
T 2o0r_A 160 RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHA-RHLPLAGFDG------MAERTITISSAA 232 (411)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC-CCCCGGGSTT------TGGGEEEEEEHH
T ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCcChhhccC------CCCCEEEEeech
Confidence 799999999999999999999999999999999999999999999987642 2334333210 022478899999
Q ss_pred cccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchh
Q psy13922 238 KGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVM 316 (509)
Q Consensus 238 K~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 316 (509)
|.+ |++|+|+||++ .++++++.+..... ..++.+.+ .+.++
T Consensus 233 K~~-~~~G~r~G~~~---~~~~~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~ 274 (411)
T 2o0r_A 233 KMF-NCTGWKIGWAC---GPAELIAGVRAAKQYLSYVGGAP----------------------------------FQPAV 274 (411)
T ss_dssp HHT-TCTTTCEEEEE---CCHHHHHHHHHHHHHHTSCCCTT----------------------------------HHHHH
T ss_pred hhc-CCccceEEEEe---eCHHHHHHHHHHHhhccCCCChH----------------------------------HHHHH
Confidence 999 79999999998 68999998877654 23344444 34444
Q ss_pred hcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHH
Q psy13922 317 DCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVL 396 (509)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (509)
..+++ ...++++++++.++++++.+.+.|+++ |+.+..+.+++++|+++.. .+..+..+
T Consensus 275 ~~~l~----------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~----------~~~~~~~~ 333 (411)
T 2o0r_A 275 ALALD----------TEDAWVAALRNSLRARRDRLAAGLTEI-GFAVHDSYGTYFLCADPRP----------LGYDDSTE 333 (411)
T ss_dssp HHHHH----------HCHHHHHHHHHHHHHHHHHHHHHHHHH-TCEECCCCBSSEEEEECGG----------GTCCCHHH
T ss_pred HHHHh----------CChHHHHHHHHHHHHHHHHHHHHHHHc-CCEecCCCeeEEEEEecCC----------CCCCCHHH
Confidence 33332 113447888999999999999999988 8888888899999987751 01113455
Q ss_pred HHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCc
Q psy13922 397 YAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGT 476 (509)
Q Consensus 397 ~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (509)
++..+++++||.+.||..|..... .|. +.+. . .+.
T Consensus 334 ~~~~l~~~~gi~v~~g~~f~~~~~--------------------------~~~-----~~~~--------~------~~~ 368 (411)
T 2o0r_A 334 FCAALPEKVGVAAIPMSAFCDPAA--------------------------GQA-----SQQA--------D------VWN 368 (411)
T ss_dssp HHHHHHHHHSEECEEGGGGSCCC-----------------------------------------------C------CGG
T ss_pred HHHHHHHhCCEEEcChhhhCCCcc--------------------------ccc-----cccc--------c------CCC
Confidence 566677788999999988743100 000 0000 0 012
Q ss_pred eeEEEEeecChHHHHHHHHHHHHHHHHHHh
Q psy13922 477 YHFRTTILPQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 477 ~~~Rls~~~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
.++||+++.++++|++++++|++++++...
T Consensus 369 ~~iRis~~~~~e~i~~~~~~l~~~~~~~~~ 398 (411)
T 2o0r_A 369 HLVRFTFCKRDDTLDEAIRRLSVLAERPAT 398 (411)
T ss_dssp GCEEEECCSCHHHHHHHHHHHGGGGC----
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHhccCc
Confidence 289999999999999999999998765543
No 27
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=6.1e-41 Score=348.57 Aligned_cols=350 Identities=20% Similarity=0.340 Sum_probs=274.0
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhh------hcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISR------RDGQPADWQDVILSAGASDGIKSVLKLLIEDV 100 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~------~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g 100 (509)
|+.+++++.+.+.. ....+|++..|..++|+++++++++ .+|+++++++|++|+|+++++..++++++++|
T Consensus 52 ~~~v~~a~~~~~~~---~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~g 128 (416)
T 1bw0_A 52 SAAQIKKLKEAIDS---QECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAG 128 (416)
T ss_dssp CHHHHHHHHHHHHT---TCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHhhC---CccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCC
Confidence 67899999999876 3345698888999999999999983 25666788999999999999999999999888
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
| .|+++.|+|.++...++..|++++.++.+++.+|.+|++.|++.+++ +++++++++|+||||.+++.+++
T Consensus 129 d----~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----~~~~v~i~~p~nptG~~~~~~~l 199 (416)
T 1bw0_A 129 D----YALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD-----KTKLLIVTNPSNPCGSNFSRKHV 199 (416)
T ss_dssp C----EEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-----TEEEEEEESSCTTTCCCCCHHHH
T ss_pred C----EEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc-----CCeEEEEeCCCCCCCcccCHHHH
Confidence 8 99999999999999999999999999987655678999999999876 68999999999999999999999
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCC---ccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGS---KFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
++|+++|+++|++||+||+|.++.+++.. .+.++..+. ...++++++|+||.+ |++|+|+||++. .+
T Consensus 200 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~i~~~s~sK~~-~~~Glr~G~~~~--~~ 269 (416)
T 1bw0_A 200 EDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFE-------TTVPRVILGGTAKNL-VVPGWRLGWLLY--VD 269 (416)
T ss_dssp HHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSC-------CSCCEEEEEESTTTT-SCGGGCCEEEEE--EC
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHcc-------CCCcEEEEecchhhC-CCCCceEEEEEe--eC
Confidence 99999999999999999999998876431 223332221 123488899999999 689999999983 34
Q ss_pred H-----HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 258 P-----GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 258 ~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
+ .+...+.......++++.+ .+.++..+++. .
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~---------~ 306 (416)
T 1bw0_A 270 PHGNGPSFLEGLKRVGMLVCGPCTV----------------------------------VQAALGEALLN---------T 306 (416)
T ss_dssp TTCSCHHHHHHHHHHHHHHTCSCHH----------------------------------HHHHHHHHHHS---------S
T ss_pred chhhHHHHHHHHHHHhccccCCCcH----------------------------------HHHHHHHHHhc---------c
Confidence 3 2333333332223456666 44444444320 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecC
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPG 412 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg 412 (509)
..+++++.++.++++++.+.+.|+++|++.+..+.+++|+|++++... ..+..+...++..+++++||.++||
T Consensus 307 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~gi~v~~g 379 (416)
T 1bw0_A 307 PQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEK-------YRDIKTDVEFFEKLLEEENVQVLPG 379 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGG-------BSSCCSHHHHHHHHHHHHCEECEEG
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHH-------cCCCCCHHHHHHHHHHHCCEEEecc
Confidence 123477888899999999999999988888887888999997664110 0011234555566777899999999
Q ss_pred CCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHH
Q psy13922 413 AGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKA 492 (509)
Q Consensus 413 ~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~ 492 (509)
..|+. ++ ++|++++.++++|++
T Consensus 380 ~~f~~------------------------------------------------~~----------~iRis~~~~~e~l~~ 401 (416)
T 1bw0_A 380 TIFHA------------------------------------------------PG----------FTRLTTTRPVEVYRE 401 (416)
T ss_dssp GGGTC------------------------------------------------TT----------EEEEECCSCHHHHHH
T ss_pred cccCC------------------------------------------------CC----------eEEEEecCCHHHHHH
Confidence 87765 34 899999999999999
Q ss_pred HHHHHHHHHHHHHh
Q psy13922 493 MLEKFREFHEEFLA 506 (509)
Q Consensus 493 ~~~~l~~~~~~~~~ 506 (509)
++++|.++++++.+
T Consensus 402 ~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 402 AVERIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999987543
No 28
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=1.2e-40 Score=347.50 Aligned_cols=348 Identities=14% Similarity=0.214 Sum_probs=283.8
Q ss_pred CCCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 21 FDDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 21 ~~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
.+++.+ |+.+++++.+.+.. ..+. |++.. .++++++++++.+.+|+++++++|++|+|+++|++.+++.+++
T Consensus 68 ~~~~~~~~~~~v~~a~~~~~~~---~~~~-y~~~~--~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~ 141 (421)
T 3l8a_A 68 VADMDFLPVPEIKEAIINYGRE---HIFG-YNYFN--DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSE 141 (421)
T ss_dssp SSCCCSCCCHHHHHHHHHHHHH---CCSS-CBCCC--HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC
T ss_pred cCCCCCCCCHHHHHHHHHHHhc---CCcC-CCCCC--HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcC
Confidence 356665 68999999999886 3333 76654 8899999999999999888899999999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC-CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD-ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
+|| +|+++.|+|.++...++..|.+++.+|.+ .+++|.+|++.|++.+++. ++++|++++|+||||.++++
T Consensus 142 ~gd----~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~----~~~~vil~~p~nptG~~~~~ 213 (421)
T 3l8a_A 142 KGD----AVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDN----NVKIYLLCSPHNPGGRVWDN 213 (421)
T ss_dssp TEE----EEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHT----TEEEEEEESSBTTTTBCCCH
T ss_pred CCC----EEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhcc----CCeEEEECCCCCCCCCcCCH
Confidence 888 99999999999999999999999999987 5556789999999999842 79999999999999999999
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++++|+++|+++|+++|+||+|.++.+++. .+.++..+.++. ..+++.+.|+||.+ |++|+|+||+++ .+
T Consensus 214 ~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~-----~~~~i~~~s~sK~~-g~~G~~~G~~~~--~~ 284 (421)
T 3l8a_A 214 DDLIKIAELCKKHGVILVSDEIHQDLALFGN-THHSLNTLDASY-----KDFTIILSSATKTF-NIAGTKNSFAII--QN 284 (421)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCTTC-CCCCGGGSCTTG-----GGTEEEEECSHHHH-TCGGGCCEEEEC--CS
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCC-CCccHHHcCchh-----cCcEEEEEeChhhc-cCchhheEeEEc--CC
Confidence 9999999999999999999999999998753 344444432221 13478899999999 789999999983 34
Q ss_pred HHHHHHHHHhhh--cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 258 PGVKAMLHKSIS--AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 258 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
+++++.+..... .+.+++.+ ++.++..+++ ...+
T Consensus 285 ~~l~~~~~~~~~~~~~~~~n~~----------------------------------~~~a~~aal~----------~~~~ 320 (421)
T 3l8a_A 285 ESLRRKFQYRQLANNQHEVPTV----------------------------------GMIATQAAFQ----------YGKP 320 (421)
T ss_dssp HHHHHHHHHHHHHTTCSCCCHH----------------------------------HHHHHHHHHH----------HCHH
T ss_pred HHHHHHHHHHHHhcccCCCCHH----------------------------------HHHHHHHHHh----------ccHH
Confidence 899999887653 34456666 4444443322 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
+++++++.++++++.+.+.|+++|++.+..+++++++|++++. .+. +..++...+++++||.+.||..|
T Consensus 321 ~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~----------~~~-~~~~l~~~l~~~~gi~v~~g~~f 389 (421)
T 3l8a_A 321 WLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSA----------YAI-AQPQLSEKLQNEAKVVLNDGAHF 389 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGG----------GTC-CTTHHHHHHHHTTCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccc----------cCC-CHHHHHHHHHHhCCEEEECchhh
Confidence 5788899999999999999988789999999999999987752 122 23444566777889999999988
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+. .+.+ ++||+++.++++|+++++
T Consensus 390 ~~------------------------------------------------~~~~--------~iRi~~~~~~~~i~~~l~ 413 (421)
T 3l8a_A 390 GK------------------------------------------------EGKY--------FARLNVATPKNTVQEALS 413 (421)
T ss_dssp CG------------------------------------------------GGTT--------EEEEECCSCHHHHHHHHH
T ss_pred CC------------------------------------------------CCCC--------EEEEEecCCHHHHHHHHH
Confidence 76 3434 999999999999999999
Q ss_pred HHHHHHH
Q psy13922 496 KFREFHE 502 (509)
Q Consensus 496 ~l~~~~~ 502 (509)
+|+++++
T Consensus 414 ~l~~~l~ 420 (421)
T 3l8a_A 414 RIISVFG 420 (421)
T ss_dssp HHHHHC-
T ss_pred HHHHHHh
Confidence 9998875
No 29
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=2e-40 Score=343.93 Aligned_cols=345 Identities=26% Similarity=0.454 Sum_probs=278.6
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+++++.+.+.. .. ..|++..|..++|+++++++...+|+++++++|++|+|+++++..++++++++||
T Consensus 55 ~~~~v~~a~~~~~~~---~~-~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd---- 126 (406)
T 1xi9_A 55 PPEHMKEAYCKAIKE---GH-NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGD---- 126 (406)
T ss_dssp CCHHHHHHHHHHHHT---TC-CSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTC----
T ss_pred CCHHHHHHHHHHHhc---CC-CCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCC----
Confidence 468899999888876 22 3598888899999999999999889888899999999999999999999988888
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.|+++.|+|.++...++..|.+++.++.+++.+|.+|++.|++.+++ ++++|++++|+||||.+++.+++++|++
T Consensus 127 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~ 201 (406)
T 1xi9_A 127 EILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD-----RTKAIAVINPNNPTGALYDKKTLEEILN 201 (406)
T ss_dssp EEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT-----TEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc-----CceEEEEECCCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999987645678899999999876 7999999999999999999999999999
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCce-eEEEEecccccCCCCCCeeEEEeeecCCH----HH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSME-LASFMSCSKGYMGECGLRGGYSEVINLDP----GV 260 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vi~i~S~SK~~~G~~Glr~G~v~~~~~~~----~~ 260 (509)
+|+++|+++|+||+|.++.+++ ...++..+. ..+ +++++|+||.+ |++|+|+||++ ++.++ ++
T Consensus 202 ~a~~~~~~li~De~~~~~~~~~--~~~~~~~~~--------~~~~~i~~~s~sK~~-~~~G~r~G~~~-~~~~~~~~~~l 269 (406)
T 1xi9_A 202 IAGEYEIPVISDEIYDLMTYEG--EHISPGSLT--------KDVPVIVMNGLSKVY-FATGWRLGYMY-FVDPENKLSEV 269 (406)
T ss_dssp HHHHHTCCEEEECTTTTCBSSS--CCCCHHHHC--------SSSCEEEEEESTTTT-CCGGGCCEEEE-EECTTCTTHHH
T ss_pred HHHHcCCEEEEEcCccccccCC--CCCCHHHcC--------CCceEEEEecccccc-CCCccEEEEEE-EecCchhHHHH
Confidence 9999999999999999998742 344555441 123 67889999999 78999999997 22466 88
Q ss_pred HHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHH
Q psy13922 261 KAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSV 340 (509)
Q Consensus 261 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 340 (509)
++.+.......++++.+ .+.++..+++. ..++++++
T Consensus 270 ~~~l~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~----------~~~~~~~~ 305 (406)
T 1xi9_A 270 REAIDRLARIRLCPNTP----------------------------------AQFAAIAGLTG----------PMDYLKEY 305 (406)
T ss_dssp HHHHHHHHHHTCCSCSH----------------------------------HHHHHHHHHHS----------CCHHHHHH
T ss_pred HHHHHHHHHhhcCCCHH----------------------------------HHHHHHHHHhC----------CcHHHHHH
Confidence 88887765422455555 34444433320 11236778
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCC
Q psy13922 341 LDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPG 420 (509)
Q Consensus 341 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~ 420 (509)
++.++++++.+.+.|+++|++.+..+.+++++|++++.. .+. +..++...+++++||.+.||..|+.
T Consensus 306 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~l~~~l~~~~gi~v~~g~~f~~--- 372 (406)
T 1xi9_A 306 MKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVG---------PWK-NDKEFVLDVLHNAHVLFVHGSGFGE--- 372 (406)
T ss_dssp HHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSC---------SCS-SHHHHHHHHHHHHCEECEEGGGGCG---
T ss_pred HHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCcc---------CCC-CHHHHHHHHHHhCCEEEeCchhcCC---
Confidence 889999999999999998888888888999999766410 011 3455556666689999999987764
Q ss_pred ccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHH
Q psy13922 421 TYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREF 500 (509)
Q Consensus 421 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~ 500 (509)
.+.+ ++|++++.++++|++++++|+++
T Consensus 373 ---------------------------------------------~~~~--------~lRis~~~~~~~i~~~~~~l~~~ 399 (406)
T 1xi9_A 373 ---------------------------------------------YGAG--------HFRAVFLPPIEILEEAMDRFEKF 399 (406)
T ss_dssp ---------------------------------------------GGTT--------BEEEECCSCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------CCCC--------EEEEEecCCHHHHHHHHHHHHHH
Confidence 2223 89999999999999999999999
Q ss_pred HHHHH
Q psy13922 501 HEEFL 505 (509)
Q Consensus 501 ~~~~~ 505 (509)
++++.
T Consensus 400 l~~~~ 404 (406)
T 1xi9_A 400 MKERL 404 (406)
T ss_dssp HHHC-
T ss_pred HHHHh
Confidence 87654
No 30
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=3.9e-40 Score=338.87 Aligned_cols=344 Identities=17% Similarity=0.268 Sum_probs=277.9
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.+.+ |+.+.+++.+.+.+ ... .|++ +..++++++++++.+.+|.++++++|++|+|+++++..++++++++
T Consensus 40 ~~~~~~~~~~v~~a~~~~~~~---~~~-~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~ 113 (391)
T 4dq6_A 40 ADMDFKAAPCIIDSLKNRLEQ---EIY-GYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKA 113 (391)
T ss_dssp SSCSSCCCHHHHHHHHHHHTT---CCC-CCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCT
T ss_pred cCCCCCCCHHHHHHHHHHHhC---CCC-CCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCC
Confidence 55655 68999999999876 333 3765 4589999999999999998888999999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC--CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD--ESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
|| +|+++.|+|.++...++..|.+++.++.+ .+++|.+|++.|++.+++ +++|++++|+||||.+++.
T Consensus 114 gd----~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~v~i~~p~nptG~~~~~ 183 (391)
T 4dq6_A 114 ND----KIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD------VKLFILCNPHNPVGRVWTK 183 (391)
T ss_dssp TC----EEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT------EEEEEEESSBTTTTBCCCH
T ss_pred CC----EEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc------CCEEEEECCCCCCCcCcCH
Confidence 88 99999999999999999999999999987 555678999999998864 8889999999999999999
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++++|+++|++||+++|+||+|.++.+++. .+.++..+..+. ..++++++|+||.+ |++|+|+||++. .+
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~-----~~~~i~~~s~sK~~-g~~G~r~G~~~~--~~ 254 (391)
T 4dq6_A 184 DELKKLGDICLKHNVKIISDEIHSDIILKKH-KHIPMASISKEF-----EKNTITCMAPTKTF-NIAGLQSSYVVL--PD 254 (391)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTCBCTTC-CCCCGGGSCHHH-----HHTEEEEECSHHHH-TCGGGCCEEEEC--CS
T ss_pred HHHHHHHHHHHHcCCEEEeeccccccccCCC-CccCHHHcCccc-----cCcEEEEEechhhc-cCcccceEEEEe--CC
Confidence 9999999999999999999999999988643 333444332221 12388899999999 799999999973 44
Q ss_pred HHHHHHHHHhhh--cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 258 PGVKAMLHKSIS--AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 258 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
+++++.+..... ...+++.+ ++.++..++. ...+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~----------~~~~ 290 (391)
T 4dq6_A 255 EKDYKLLDDAFTRIDIKRNNCF----------------------------------SLVATEASYN----------NGES 290 (391)
T ss_dssp HHHHHHHHHHHHHTTCCCCCHH----------------------------------HHHHHHHHHH----------HCHH
T ss_pred HHHHHHHHHHHHhhcCCCCCHH----------------------------------HHHHHHHHHh----------chHH
Confidence 589998887654 23355665 4444333322 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCC
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNS-IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAG 414 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~ 414 (509)
++++.++.++++++.+.+.|++ +|++.+..+++++++|++++. .+. +...+...+++++||.++||..
T Consensus 291 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~l~~~~gi~v~~g~~ 359 (391)
T 4dq6_A 291 WLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSA----------LGL-SDEELESILVQKGKVALNQGNS 359 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGG----------GCC-CHHHHHHHHHHTTCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhh----------cCC-CHHHHHHHHHHhCCEEeeCchh
Confidence 4788899999999999999988 789999999999999987751 011 3455555666656999999998
Q ss_pred CCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHH
Q psy13922 415 FGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAML 494 (509)
Q Consensus 415 f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~ 494 (509)
|+. .+.+ ++|++++.++++|++++
T Consensus 360 ~~~------------------------------------------------~~~~--------~iRis~~~~~~~i~~~l 383 (391)
T 4dq6_A 360 FGI------------------------------------------------GGSG--------YQRINLACPRSMLEEAL 383 (391)
T ss_dssp GCT------------------------------------------------TCTT--------EEEEECCSCHHHHHHHH
T ss_pred hCC------------------------------------------------CCCC--------eEEEEEcCCHHHHHHHH
Confidence 876 3434 99999999999999999
Q ss_pred HHHHHHH
Q psy13922 495 EKFREFH 501 (509)
Q Consensus 495 ~~l~~~~ 501 (509)
++|++++
T Consensus 384 ~~l~~~l 390 (391)
T 4dq6_A 384 IRIKNAI 390 (391)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999876
No 31
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=3.1e-40 Score=340.35 Aligned_cols=342 Identities=18% Similarity=0.251 Sum_probs=272.9
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHH-HHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEI-IRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~-lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~ 104 (509)
.|+.+.+++.+.+.. . ...|++. ..+ +|+++++++.+++|+++++++|++|+|+++++..++++++++||
T Consensus 42 ~~~~v~~a~~~~~~~---~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd--- 112 (390)
T 1d2f_A 42 TAPCIIEALNQRLMH---G-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGE--- 112 (390)
T ss_dssp CCHHHHHHHHHHHTT---C-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTC---
T ss_pred CCHHHHHHHHHHHhC---C-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCC---
Confidence 368999999988865 2 3348765 578 99999999998888888899999999999999999999998888
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEEecCCC-CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGYYLDES-KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
+|+++.|+|.++...++..|.+++.+|.+++ +.|.+|++.|++.+++. ++++|++++|+||||.+++.+++++|
T Consensus 113 -~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~----~~~~v~l~~p~nptG~~~~~~~l~~l 187 (390)
T 1d2f_A 113 -GVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP----ECKIMLLCSPQNPTGKVWTCDELEIM 187 (390)
T ss_dssp -EEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTST----TEEEEEEESSCTTTCCCCCTTHHHHH
T ss_pred -EEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccC----CCeEEEEeCCCCCCCcCcCHHHHHHH
Confidence 9999999999999999999999999998754 35679999999999753 68999999999999999999999999
Q ss_pred HHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHH
Q psy13922 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAM 263 (509)
Q Consensus 184 ~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~ 263 (509)
+++|+++|+++|+||+|.++.+++. .+.++..+.+ . ..+. +.|+||.+ |++|+|+||+++ .++++++.
T Consensus 188 ~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~----~--~~d~--~~s~sK~~-~~~G~r~G~~~~--~~~~~~~~ 255 (390)
T 1d2f_A 188 ADLCERHGVRVISDEIHMDMVWGEQ-PHIPWSNVAR----G--DWAL--LTSGSKSF-NIPALTGAYGII--ENSSSRDA 255 (390)
T ss_dssp HHHHHHTTCEEEEECTTTTCBCSSS-CCCCGGGTCC----S--SEEE--EECSHHHH-TCGGGCCEEEEE--CSHHHHHH
T ss_pred HHHHHHcCCEEEEEccccccccCCC-CCcCHHHcch----h--hHhh--ccCccHhh-cccChhheEEEE--CCHHHHHH
Confidence 9999999999999999999987642 3334333211 1 0023 88999999 799999999983 46889888
Q ss_pred HHHhhh---cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHH
Q psy13922 264 LHKSIS---AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSV 340 (509)
Q Consensus 264 l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 340 (509)
+..... .+++++.+ ++.++..+++ ...+++++.
T Consensus 256 ~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~----------~~~~~~~~~ 291 (390)
T 1d2f_A 256 YLSALKGRDGLSSPSVL----------------------------------ALTAHIAAYQ----------QGAPWLDAL 291 (390)
T ss_dssp HHHHHHTTSCCCSCCHH----------------------------------HHHHHHHHHH----------HCHHHHHHH
T ss_pred HHHHHhhhcccCCCCHH----------------------------------HHHHHHHHHh----------cCHHHHHHH
Confidence 877654 23355666 4444333322 113347888
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 341 LDSLKQRAKMVADTFNS-IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 341 ~~~~~~~~~~l~~~L~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
++.++++++.+.+.|++ +|++.+.++.+++++|++++.. +. +...+...+++++||.+.||..|+.
T Consensus 292 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~l~~~l~~~~gi~v~~g~~f~~-- 358 (390)
T 1d2f_A 292 RIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPL----------NI-DDNALQKALIEQEKVAIMPGYTYGE-- 358 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGG----------CC-CHHHHHHHHHHTTCEECEEGGGGCG--
T ss_pred HHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEcccc----------CC-CHHHHHHHHHHHcCEEeeCccccCC--
Confidence 89999999999999998 8899888899999999777410 12 2445555566578999999987764
Q ss_pred CccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHH
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFRE 499 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~ 499 (509)
.+.+ ++|++++.++++|++++++|++
T Consensus 359 ----------------------------------------------~~~~--------~~Ris~~~~~~~l~~~l~~l~~ 384 (390)
T 1d2f_A 359 ----------------------------------------------EGRG--------FVRLNAGCPRSKLEKGVAGLIN 384 (390)
T ss_dssp ----------------------------------------------GGTT--------EEEEECCSCHHHHHHHHHHHHH
T ss_pred ----------------------------------------------CCCC--------eEEEEecCCHHHHHHHHHHHHH
Confidence 2223 9999999889999999999999
Q ss_pred HHHHH
Q psy13922 500 FHEEF 504 (509)
Q Consensus 500 ~~~~~ 504 (509)
+++++
T Consensus 385 ~l~~~ 389 (390)
T 1d2f_A 385 AIRAV 389 (390)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 98765
No 32
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=4.8e-40 Score=339.19 Aligned_cols=332 Identities=23% Similarity=0.373 Sum_probs=274.1
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+.+++.+.+.. .. .+|++..|..++|+++++++.+.+|+++++++|++|+|+++++..++++++++||
T Consensus 55 ~~~~v~~a~~~~~~~---~~-~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd---- 126 (389)
T 1o4s_A 55 TPEPVVEEAVRFLQK---GE-VKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGD---- 126 (389)
T ss_dssp CCHHHHHHHHHHHTT---CC-CCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTC----
T ss_pred CCHHHHHHHHHHHhc---CC-CCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCC----
Confidence 368899999988876 22 3598888899999999999998888878889999999999999999999988888
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.|+++.|+|.++...++..|.+++.++.+++.+|.+|++.|++.+++ ++++|++++|+||||.++|.+++++|++
T Consensus 127 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~p~nptG~~~~~~~l~~l~~ 201 (389)
T 1o4s_A 127 EVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG-----KTKAVLINSPNNPTGVVYRREFLEGLVR 201 (389)
T ss_dssp EEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT-----TEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc-----CceEEEEcCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999987655688999999998876 7899999999999999999999999999
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
+|+++|+++|+||+|.++.+++ ...++..+.. . ..++++++|+||.+ |++|+|+||++ .++++++.+.
T Consensus 202 ~~~~~~~~li~Dea~~~~~~~g--~~~~~~~~~~-~-----~~~~i~~~s~sK~~-~~~G~r~G~l~---~~~~~~~~l~ 269 (389)
T 1o4s_A 202 LAKKRNFYIISDEVYDSLVYTD--EFTSILDVSE-G-----FDRIVYINGFSKSH-SMTGWRVGYLI---SSEKVATAVS 269 (389)
T ss_dssp HHHHHTCEEEEECTTTTSBCSS--CCCCHHHHCS-S-----STTEEEEEESTTTT-TCGGGCCEEEE---CCHHHHHHHH
T ss_pred HHHHcCCEEEEEccccccccCC--CCCCHhhcCC-C-----CCcEEEEeechhhc-CCcccceEEEE---eCHHHHHHHH
Confidence 9999999999999999988764 3445555421 0 12378899999999 79999999998 7899999888
Q ss_pred Hhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHH
Q psy13922 266 KSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSL 344 (509)
Q Consensus 266 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (509)
.... ...+++.+ .+.++..+++. + ++++++.+
T Consensus 270 ~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~-----~--------~~~~~~~~ 302 (389)
T 1o4s_A 270 KIQSHTTSCINTV----------------------------------AQYAALKALEV-----D--------NSYMVQTF 302 (389)
T ss_dssp HHHHHHTCSCCHH----------------------------------HHHHHHHHTTC-----C--------CHHHHHHH
T ss_pred HHhhhcccCCCHH----------------------------------HHHHHHHHHhc-----c--------HHHHHHHH
Confidence 7655 23455555 34433333331 0 45667788
Q ss_pred HHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCcccc
Q psy13922 345 KQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHF 424 (509)
Q Consensus 345 ~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~ 424 (509)
+++++.+.+.|+++ |+.+..+.+++++|++++ . +..++...+++++||.+.||..|+.
T Consensus 303 ~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--~------------~~~~l~~~l~~~~gi~v~~g~~f~~------- 360 (389)
T 1o4s_A 303 KERKNFVVERLKKM-GVKFVEPEGAFYLFFKVR--G------------DDVKFCERLLEEKKVALVPGSAFLK------- 360 (389)
T ss_dssp HHHHHHHHHHHHHT-TCCCCCCSBSSEEEEECS--S------------CHHHHHHHHHHHHCEECEEGGGGTC-------
T ss_pred HHHHHHHHHHHHhc-CCeeecCCcceEEEEeCC--C------------CHHHHHHHHHHHCCEEEeCchhcCC-------
Confidence 88999999999988 888888889999997664 1 2444555666688999999887765
Q ss_pred ccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHH
Q psy13922 425 RQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 425 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~ 502 (509)
++ ++|++++.++++|++++++|+++++
T Consensus 361 -----------------------------------------~~----------~~Ris~~~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 361 -----------------------------------------PG----------FVRLSFATSIERLTEALDRIEDFLN 387 (389)
T ss_dssp -----------------------------------------TT----------EEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred -----------------------------------------CC----------eEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 33 8999999999999999999998874
No 33
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=2.6e-40 Score=347.57 Aligned_cols=342 Identities=19% Similarity=0.281 Sum_probs=275.0
Q ss_pred CCCCC--CHHHHHHHHHHHhcccC-CCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRG-QSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~-~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.+.+ |+.|++++.+++..... .....|++..|..+||+++++++. +|+++++++|++|+|+++++..+ ..+++
T Consensus 77 g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~ 153 (449)
T 3qgu_A 77 GDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFG 153 (449)
T ss_dssp CCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHC
T ss_pred CCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhC
Confidence 55554 78999999999885321 233459988999999999999997 68888899999999999999998 88888
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCE----------EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNME----------QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~----------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
+|| .|+++.|+|.++...++..|.+ ++.++.++++++..|++.+ . ++++|++++||
T Consensus 154 ~gd----~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~v~l~~p~ 219 (449)
T 3qgu_A 154 SKP----TVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----K-----RTDIIFFCSPN 219 (449)
T ss_dssp SSS----CEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----C-----CCSEEEEESSC
T ss_pred CCC----EEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----C-----CCCEEEEeCCC
Confidence 988 9999999999999999999998 9999998776677776543 2 79999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 169 NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 169 NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
||||.+++.+++++|+++|+++|+++|+||+|.+|.+++. ...++..+... ..+++++.|+||.+ |++|+|+
T Consensus 220 NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~~------~~~~i~~~s~sK~~-g~~G~r~ 291 (449)
T 3qgu_A 220 NPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD-CPKTIYEIPGA------DEVAIETCSFSKYA-GFTGVRL 291 (449)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTT-SCSSGGGSTTG------GGTEEEEEECSGGG-TCTTCCC
T ss_pred CCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCC-CCCCHhhccCC------CCcEEEEecchhhc-CCcccee
Confidence 9999999999999999999999999999999999988643 23343332110 23478899999999 7999999
Q ss_pred EEEeeecCCHHHHH--------HHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcc
Q psy13922 249 GYSEVINLDPGVKA--------MLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCV 319 (509)
Q Consensus 249 G~v~~~~~~~~~~~--------~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 319 (509)
||++ .++++++ .+..... .+.+++.+ ++.++..+
T Consensus 292 G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~ 334 (449)
T 3qgu_A 292 GWTV---VPKALKYANGEPVHADWNRVMTTCFNGASNI----------------------------------VQAGGLAC 334 (449)
T ss_dssp EEEE---CCTTCBCTTSCBHHHHHHHHHHHSCCCCCHH----------------------------------HHHHHHHH
T ss_pred EEEe---cCHHHHhhhhhhHHHHHHHHhhcccCCCCHH----------------------------------HHHHHHHH
Confidence 9998 6776654 4444433 44466776 55555555
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHH
Q psy13922 320 VNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAF 399 (509)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 399 (509)
+. +...++++++++.++++++.+.+.|+++ |+.+..+++++|+|++++ . . ++.+++.
T Consensus 335 l~---------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~-----------~-~~~~~~~ 391 (449)
T 3qgu_A 335 LQ---------PEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGDDAPYIWVGFP-G-----------K-PSWDVFA 391 (449)
T ss_dssp TS---------HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEESSSSSEEEEECT-T-----------S-CHHHHHH
T ss_pred Hh---------hcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCeeEEEEECC-C-----------C-CHHHHHH
Confidence 44 2233568899999999999999999998 899888999999998775 1 1 3455667
Q ss_pred HHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeE
Q psy13922 400 ELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHF 479 (509)
Q Consensus 400 ~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (509)
.+++++||.+.||..|+. .+.+ +|
T Consensus 392 ~l~~~~gI~v~pg~~f~~------------------------------------------------~~~~--------~i 415 (449)
T 3qgu_A 392 EILERCNIVTTPGSGYGP------------------------------------------------AGEG--------FV 415 (449)
T ss_dssp HHHHHHCEECEEGGGGCG------------------------------------------------GGTT--------EE
T ss_pred HHHHHCCEEEecchHhCC------------------------------------------------CCCC--------eE
Confidence 788888999999998876 3444 99
Q ss_pred EEEeecChHHHHHHHHHHHHHHHHH
Q psy13922 480 RTTILPQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 480 Rls~~~~~~~i~~~~~~l~~~~~~~ 504 (509)
||+++.++++|++++++|++++++-
T Consensus 416 Ris~~~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 416 RASAFGSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp EEECCSCHHHHHHHHHHHHHHHC--
T ss_pred EEEecCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998653
No 34
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=7.3e-40 Score=341.90 Aligned_cols=371 Identities=16% Similarity=0.250 Sum_probs=286.0
Q ss_pred HHHHHHHhhcCCCCC----CCCC---C-CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCC-CCCC
Q psy13922 7 LSLQVLALVSLPQLF----DDPR---F-PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQP-ADWQ 77 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~----~~~~---~-p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~-~~~~ 77 (509)
.+++++..++.+.++ |.|. + |+.+.+++.+.++... ....+|++..|..++|+++++++.+++|++ ++++
T Consensus 32 ~~~~~~~~~~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~ 110 (425)
T 1vp4_A 32 IIREILKFAADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEY-HYTLQYSTTEGDPVLKQQILKLLERMYGITGLDED 110 (425)
T ss_dssp CHHHHTTTTTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSH-HHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGG
T ss_pred HHHHHHHhccCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcc-hhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcc
Confidence 456666666555543 3333 2 3578888888887621 123459888899999999999998877877 7889
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc--
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK-- 155 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~-- 155 (509)
+|++|+|+++++..++++++++|| .|+++.|+|.++...++..|.+++.++.+++ ++|++.|++.+++...
T Consensus 111 ~v~~t~G~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~ 183 (425)
T 1vp4_A 111 NLIFTVGSQQALDLIGKLFLDDES----YCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDLNVLERKLSEFDKNG 183 (425)
T ss_dssp GEEEEEHHHHHHHHHHHHHCCTTC----EEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHHHHHHHHHHTT
T ss_pred cEEEeccHHHHHHHHHHHhCCCCC----EEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCHHHHHHHHHhhhhcc
Confidence 999999999999999999998888 9999999999999999999999999998764 4899999999976210
Q ss_pred -cCCceEEE-EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEE
Q psy13922 156 -HCNPRAIV-IINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASF 233 (509)
Q Consensus 156 -~~~~~~iv-i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i 233 (509)
..++++|+ +++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++. .+.++..+.. ..+++++
T Consensus 184 ~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~-------~~~~i~~ 255 (425)
T 1vp4_A 184 KIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGE-TVDPIFKIGG-------PERVVLL 255 (425)
T ss_dssp CGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSC-CCCCHHHHHC-------TTTEEEE
T ss_pred cCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC-CCcCHHHhCC-------CCCEEEE
Confidence 01588885 689999999999999999999999999999999999999988643 3456655531 1248889
Q ss_pred EecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccc
Q psy13922 234 MSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVG 312 (509)
Q Consensus 234 ~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (509)
+|+||.+ | +|+|+||++ .++++++.+..... ...+.+.+ .
T Consensus 256 ~s~sK~~-~-~G~r~G~~~---~~~~~~~~l~~~~~~~~~~~~~~----------------------------------~ 296 (425)
T 1vp4_A 256 NTFSKVL-A-PGLRIGMVA---GSKEFIRKIVQAKQSADLCSPAI----------------------------------T 296 (425)
T ss_dssp EESTTTT-C-GGGCEEEEE---CCHHHHHHHHHHHHHHHSSCCHH----------------------------------H
T ss_pred ecccccc-c-cccceEEEe---eCHHHHHHHHHHhhhhcCCCCHH----------------------------------H
Confidence 9999999 7 999999998 68999998887654 23345666 4
Q ss_pred cchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC---CCeeccCCceeEEeecCCCCHHHHHHHhh
Q psy13922 313 QTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS-IE---GMSCNPVQGAMYAFPQMKLPAKAIAKAKA 388 (509)
Q Consensus 313 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 388 (509)
+.++..+++ +. .+.++++++++.++++++.+.+.|++ .| ++.+..+.+++|+|++++.
T Consensus 297 ~~a~~~~l~-----~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~---------- 358 (425)
T 1vp4_A 297 HRLAARYLE-----RY---DLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE---------- 358 (425)
T ss_dssp HHHHHHHHH-----HS---CHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCT----------
T ss_pred HHHHHHHHh-----cC---CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCC----------
Confidence 444444433 11 12344788889999999999999987 45 6888878889999987751
Q ss_pred cCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCC
Q psy13922 389 EGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGA 468 (509)
Q Consensus 389 ~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (509)
+. +..++...+++ +||.+.||..|+... .+.
T Consensus 359 -~~-~~~~l~~~l~~-~gi~v~~g~~f~~~~----------------------------------------------~~~ 389 (425)
T 1vp4_A 359 -GF-DTWEMFEYAKR-KKVFYVPGRVFKVYD----------------------------------------------EPS 389 (425)
T ss_dssp -TC-CTTTTHHHHHH-HTEECEEGGGGCTTC----------------------------------------------CCC
T ss_pred -CC-CHHHHHHHHHH-CCCEEECchhhcCCC----------------------------------------------CCC
Confidence 22 23334455555 499999998886510 122
Q ss_pred CCCCCCCceeEEEEeec-ChHHHHHHHHHHHHHHHHHHhh
Q psy13922 469 GFGQVPGTYHFRTTILP-QPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 469 ~~~~~~~~~~~Rls~~~-~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
+ ++|++++. +++++++++++|+++++++.++
T Consensus 390 ~--------~iRis~~~~~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 390 P--------SMRLSFCLPPDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp S--------EEEEECSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--------eEEEEeCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 2 89999995 7999999999999999887665
No 35
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=2.4e-40 Score=345.56 Aligned_cols=367 Identities=16% Similarity=0.197 Sum_probs=277.8
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhcCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd~~~ 104 (509)
.|+.+++++.+++..... ....|++..|..++|+++++++.+.+|.+++++ +|++|+|+++++..++++++++||
T Consensus 51 ~~~~v~~a~~~~~~~~~~-~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd--- 126 (429)
T 1yiz_A 51 APKYALNALAAAANSPDP-LANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGD--- 126 (429)
T ss_dssp CCHHHHHHHHHHHTCSCG-GGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTC---
T ss_pred CCHHHHHHHHHHHhcccc-CccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCC---
Confidence 478999999998876321 345698888899999999999998888888888 999999999999999999998888
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEEecCCCC--------CCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGYYLDESK--------QWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
.|+++.|+|.++...++..|.+++.++.+++. +|.+|++.|++.+++ ++++|++++|+||||.++|
T Consensus 127 -~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~p~nptG~~~~ 200 (429)
T 1yiz_A 127 -EVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE-----KTKMIIINTPHNPLGKVMD 200 (429)
T ss_dssp -EEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCT-----TEEEEEEESSCTTTCCCCC
T ss_pred -EEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhcc-----CceEEEECCCCCCCCccCC
Confidence 99999999999999999999999999987642 578999999999875 7999999999999999999
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
++++++|+++|++||+++|+||+|.++.+++. .+.++..+. + ...+++++.|+||.+ |++|+|+||++ .
T Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~-~-----~~~~~~~~~s~sK~~-~~~G~r~G~~~---~ 269 (429)
T 1yiz_A 201 RAELEVVANLCKKWNVLCVSDEVYEHMVFEPF-EHIRICTLP-G-----MWERTITIGSAGKTF-SLTGWKIGWAY---G 269 (429)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTS-CCCCGGGST-T-----TGGGEEEEEEHHHHH-TCGGGCCEEEE---S
T ss_pred HHHHHHHHHHHHHcCcEEEEeccccccccCCC-CCcChhhcc-C-----CcCceEEEecchhcc-CCCCcceEEEE---e
Confidence 99999999999999999999999999988643 233433221 0 023478899999999 78999999998 7
Q ss_pred CHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 257 DPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 257 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
++++++.+..... ..++.+.+ .+.++..+++... ..+..+.+
T Consensus 270 ~~~~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~~~---~~~~~~~~ 312 (429)
T 1yiz_A 270 PEALLKNLQMVHQNCVYTCATP----------------------------------IQEAIAVGFETEL---KRLKSPEC 312 (429)
T ss_dssp CHHHHHHHHHHHHTTTCCCCHH----------------------------------HHHHHHHHHHHHH---TTTTSTTS
T ss_pred CHHHHHHHHHHHhhcccCCChH----------------------------------HHHHHHHHHhccc---ccccchHH
Confidence 8999998887654 34456666 3333333322000 00000122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
+++++++.++++++.+.+.|+++ ++.+..+.+++++|+++.-...........+..+..+++..+++++||.+.||..|
T Consensus 313 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f 391 (429)
T 1yiz_A 313 YFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAF 391 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHh
Confidence 37788899999999999999988 88888888999999877521000000000000123455566777899999999877
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+.... . ..+.+ ++|++++.++++|+++++
T Consensus 392 ~~~~~---------------------------------------~----~~~~~--------~iRis~~~~~e~i~~~l~ 420 (429)
T 1yiz_A 392 YSEPN---------------------------------------K----HLGED--------FVRYCFFKKDENLQKAAE 420 (429)
T ss_dssp SCGGG---------------------------------------G----GGTTT--------EEEEECCSCHHHHHHHHH
T ss_pred CCCcc---------------------------------------c----CCCCC--------eEEEEecCCHHHHHHHHH
Confidence 65100 0 00122 999999999999999999
Q ss_pred HHHHHHH
Q psy13922 496 KFREFHE 502 (509)
Q Consensus 496 ~l~~~~~ 502 (509)
+|+++++
T Consensus 421 ~l~~~l~ 427 (429)
T 1yiz_A 421 ILRKWKG 427 (429)
T ss_dssp HHHHHSC
T ss_pred HHHHhcc
Confidence 9998763
No 36
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.6e-39 Score=340.24 Aligned_cols=345 Identities=20% Similarity=0.326 Sum_probs=271.5
Q ss_pred ccCCCCcchHHHHHHHHHHHhhhcC--CCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH-h
Q psy13922 47 GSYTDSPGIEIIRRHVAQYISRRDG--QPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA-E 123 (509)
Q Consensus 47 ~~Y~~~~g~~~lr~~va~~l~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~-~ 123 (509)
.+|++..|.+++|+++++++++..+ +++++++|++|+|+++++..++++++++|| .|+++.|+|.++...+. .
T Consensus 80 ~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd----~vl~~~p~~~~~~~~~~~~ 155 (435)
T 3piu_A 80 ALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE----AVLIPTPYYPGFDRDLKWR 155 (435)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTC----EEEEEESCCTTHHHHTTTT
T ss_pred cccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCC----eEEECCCccccHHHHHHHh
Confidence 4599999999999999999985544 557788999999999999999999999998 99999999999998888 7
Q ss_pred cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCc
Q psy13922 124 FNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQD 202 (509)
Q Consensus 124 ~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~ 202 (509)
.|.+++.++.+++++|.+|++.|++.+++.... .++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.+
T Consensus 156 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~ 235 (435)
T 3piu_A 156 TGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSG 235 (435)
T ss_dssp TCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG
T ss_pred cCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccc
Confidence 899999999988777889999999999874322 3689999999999999999999999999999999999999999999
Q ss_pred ccccCCCccccHHHHHHHhCCCC---CCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhh
Q psy13922 203 NVYAEGSKFYSFKKVLVEMGEPY---KSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLAL 279 (509)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 279 (509)
+.+++. .+.++..+..+.+.+. ...++++++|+||.+ |++|+|+||++. .++.+++.+.+... +...+.+
T Consensus 236 ~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~-g~~G~r~G~~~~--~~~~~~~~~~~~~~-~~~~~~~-- 308 (435)
T 3piu_A 236 TAFSSP-SFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL-GLPGFRVGAIYS--NDDMVVAAATKMSS-FGLVSSQ-- 308 (435)
T ss_dssp GCCSSS-CCCCHHHHHHC-------CGGGGEEEEEESSSSS-CCGGGCEEEEEE--SCHHHHHHHHHHGG-GSCCCHH--
T ss_pred cccCCC-CCcCHHHhccccccccccCCCCCEEEEEeeeccc-CCCceeEEEEEe--CCHHHHHHHHHHhh-cCCCCHH--
Confidence 888653 4556666554311000 012478899999999 899999999973 47888888876554 3344555
Q ss_pred hccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHH-HHHHHHHHHHHHHHHHHHHHHHhcC
Q psy13922 280 VSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQF-SREKQSVLDSLKQRAKMVADTFNSI 358 (509)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 358 (509)
.+.++..++.. ..+ .+++++.++.++++++.+.+.|+++
T Consensus 309 --------------------------------~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 309 --------------------------------TQHLLSAMLSD--------KKLTKNYIAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp --------------------------------HHHHHHHHHHC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred --------------------------------HHHHHHHHhcC--------hHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34444333331 222 3346788899999999999999998
Q ss_pred CCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHH
Q psy13922 359 EGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAI 438 (509)
Q Consensus 359 ~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~ 438 (509)
|+.+.++.+++++|+++..... ........+++..+++++||.+.||..|+.
T Consensus 349 -g~~~~~~~~g~~~~~~l~~~~~------~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------------------- 400 (435)
T 3piu_A 349 -GISCLNGNAGLFCWVDMRHLLR------SNTFEAEMELWKKIVYEVHLNISPGSSCHC--------------------- 400 (435)
T ss_dssp -TCEECCCCSSSEEEEECGGGSS------SSSHHHHHHHHHHHHHTSCEECEEGGGGTC---------------------
T ss_pred -CCcccCCCeeEEEEEEcccccc------cCCchhHHHHHHHHHHHCCEEEeCCcccCC---------------------
Confidence 8998899999999987752100 000001334566777777999999998876
Q ss_pred HHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeec-ChHHHHHHHHHHHHHHHHHH
Q psy13922 439 AKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILP-QPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~-~~~~i~~~~~~l~~~~~~~~ 505 (509)
.+.+ ++||+++. ++++|++++++|++++++++
T Consensus 401 ---------------------------~~~~--------~iRi~~~~~~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 401 ---------------------------TEPG--------WFRVCFANLPERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp ---------------------------SSTT--------EEEEECSSSCHHHHHHHHHHHHHHHHHHC
T ss_pred ---------------------------CCCC--------EEEEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence 3333 99999995 99999999999999998764
No 37
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=8.7e-40 Score=340.79 Aligned_cols=335 Identities=16% Similarity=0.172 Sum_probs=255.0
Q ss_pred hHHHHHHHHhhc---CCCCC----C---CCCC----CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhc
Q psy13922 5 FSLSLQVLALVS---LPQLF----D---DPRF----PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRD 70 (509)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~----~---~~~~----p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~ 70 (509)
.+.++.++..+. .++.+ | +|+. ++.+++++.+++.. ....+|++..|.+++|+++++++....
T Consensus 33 ~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 109 (420)
T 4f4e_A 33 RDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEA---GLPRGYLPIDGIAAYDASVQKLLLGDD 109 (420)
T ss_dssp CCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHT---CCCCCCCCTTCCHHHHHHHHHHHHCTT
T ss_pred CChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhcc---CCCCCCCCCCCcHHHHHHHHHHhcCCC
Confidence 345666665543 34433 4 3443 37999999998887 344569999999999999999997665
Q ss_pred CCCCCCC--cEEEeCCHHHHHHHHHH--HhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHH
Q psy13922 71 GQPADWQ--DVILSAGASDGIKSVLK--LLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISEL 146 (509)
Q Consensus 71 g~~~~~~--~i~~t~G~~~al~~~~~--~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L 146 (509)
+..++++ +|++|+|+++++..+++ .++++|| +|+++.|+|.++...++..|.+++.++..++.++.+|++.|
T Consensus 110 ~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd----~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 185 (420)
T 4f4e_A 110 SPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKA----KVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGM 185 (420)
T ss_dssp CHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTC----CEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHH
T ss_pred ccccccCceEEEECCccHHHHHHHHHHHHHhCCCC----EEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHH
Confidence 4444678 89999999999999954 5678888 99999999999999999999999999985444678999999
Q ss_pred HHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCC
Q psy13922 147 ERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYK 226 (509)
Q Consensus 147 ~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (509)
++.+++. .++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++++....++..+. +.
T Consensus 186 ~~~l~~~--~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~~----- 257 (420)
T 4f4e_A 186 LAALNGY--EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFA-AA----- 257 (420)
T ss_dssp HHHHTTC--CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHH-HT-----
T ss_pred HHHHHhC--CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHH-hc-----
Confidence 9999742 116788889999999999999999999999999999999999999999986433344555443 22
Q ss_pred CceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHH----HHhh-hcccCcchhhhhccccccCCCCCchhHHHHHHH
Q psy13922 227 SMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAML----HKSI-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQA 301 (509)
Q Consensus 227 ~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (509)
..++++++|+||.+ |++|+|+||++++..++++++.+ .... ..+.+++..
T Consensus 258 ~~~~i~~~S~SK~~-~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 312 (420)
T 4f4e_A 258 NLNVFVSSSFSKSF-SLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTH------------------------ 312 (420)
T ss_dssp TCCEEEEEECTTTT-TCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSH------------------------
T ss_pred CCCEEEEEeCCccC-cCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHH------------------------
Confidence 23489999999999 79999999986444577766553 2222 234455665
Q ss_pred hhhcccCcccccchhhcccCCCCCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeeccCCceeEEeecCC
Q psy13922 302 VLDGCRGQSVGQTVMDCVVNPPQPGEPSY-EQFSREKQSVLDSLKQRAKMVADTFNSI---EGMSCNPVQGAMYAFPQMK 377 (509)
Q Consensus 302 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~g~~~~~~~~ 377 (509)
++.++..++. ++.+ +.|.++++++++.++++++.+.+.|+++ +++.+..+++++|+|++++
T Consensus 313 ----------~~~~~~~~l~-----~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~ 377 (420)
T 4f4e_A 313 ----------GGAIVAAVLA-----SPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT 377 (420)
T ss_dssp ----------HHHHHHHHHH-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC
T ss_pred ----------HHHHHHHHhc-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC
Confidence 4444433332 1111 2245668999999999999999999987 4788888999999996553
Q ss_pred CCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 378 LPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
. ..+..+++++||++.|
T Consensus 378 ----------------~-~~~~~~l~~~gI~v~~ 394 (420)
T 4f4e_A 378 ----------------S-AQVDRLREEFGIYAVS 394 (420)
T ss_dssp ----------------H-HHHHHHHHHHCEECCT
T ss_pred ----------------H-HHHHHHHHhCCEEecC
Confidence 1 2357888899999884
No 38
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=1.1e-39 Score=341.18 Aligned_cols=339 Identities=19% Similarity=0.274 Sum_probs=269.6
Q ss_pred CCCCCC--CHHHHHHHHHHHhcccC-CCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh
Q psy13922 21 FDDPRF--PDDVKQRAQAVLDGCRG-QSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 21 ~~~~~~--p~~v~~a~~~~l~~~~~-~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 97 (509)
.+++.+ |+.|++++.+++..... .....|++..|..++|+++++++.+ ++.+++++|++|+|+++++..+ ..++
T Consensus 63 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~l-~~l~ 139 (432)
T 3ei9_A 63 IGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFVSDGAKCDISRL-QVMF 139 (432)
T ss_dssp SCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEEESCHHHHHHHH-HHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEECCChHHHHHHH-HHHc
Confidence 366665 68999999999886332 2334598888999999999999974 5567889999999999999874 7778
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCC------------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNM------------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII 165 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~------------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~ 165 (509)
++|| .|+++.|+|.++...++..|. +++.++.++++++..|++. .. ++++|+++
T Consensus 140 ~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~-----~~~~v~l~ 205 (432)
T 3ei9_A 140 GSNV----TIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VG-----RTDIIFFC 205 (432)
T ss_dssp CTTC----CEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CC-----CCSEEEEE
T ss_pred CCCC----EEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----CC-----CCCEEEEe
Confidence 8888 999999999999999888874 6788888766666666544 12 78999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 166 NPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 166 ~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
+||||||.+++.+++++|+++|++||++||+||+|.++.+++. ..++..+. .. ..++++++|+||.+ |++|
T Consensus 206 ~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~--~~~~~~~~-~~-----~~~~i~~~S~SK~~-g~~G 276 (432)
T 3ei9_A 206 SPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN--PRSIFEIP-GA-----EEVAMETASFSNYA-GFTG 276 (432)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC--CSSGGGST-TG-----GGTEEEEEESHHHH-CTTT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC--CCChhhcC-CC-----CCeEEEEecchhcc-CCcc
Confidence 9999999999999999999999999999999999999987642 23333321 10 23488899999999 7999
Q ss_pred CeeEEEeeecCCHHH--------HHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchh
Q psy13922 246 LRGGYSEVINLDPGV--------KAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVM 316 (509)
Q Consensus 246 lr~G~v~~~~~~~~~--------~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 316 (509)
+|+||++ .++++ ++.+.+... .+.+++.+ ++.++
T Consensus 277 ~r~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~ 319 (432)
T 3ei9_A 277 VRLGWTV---IPKKLLYSDGFPVAKDFNRIICTCFNGASNI----------------------------------SQAGA 319 (432)
T ss_dssp TCCEEEE---CCTTCBCTTSCBHHHHHHHHHHHSCCCSCHH----------------------------------HHHHH
T ss_pred cceEEEE---EChHHhhcchHHHHHHHHHHhccccCCCCHH----------------------------------HHHHH
Confidence 9999998 56666 777776554 34556666 55554
Q ss_pred hcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHH
Q psy13922 317 DCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVL 396 (509)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (509)
..++. +...++++++++.++++++.+.+.|+++ |+.+..+.+++|+|++++ +. ++.+
T Consensus 320 ~~~l~---------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~------------~~-~~~~ 376 (432)
T 3ei9_A 320 LACLT---------PEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHFP------------NQ-SSWD 376 (432)
T ss_dssp HHHSS---------HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECSSSSEEEEECT------------TS-CHHH
T ss_pred HHHHh---------cccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEEECC------------CC-CHHH
Confidence 44443 2233568899999999999999999998 888888888899998775 11 3455
Q ss_pred HHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCc
Q psy13922 397 YAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGT 476 (509)
Q Consensus 397 ~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (509)
++..+++++||.+.||..|+. .+.+
T Consensus 377 ~~~~ll~~~gv~v~~g~~f~~------------------------------------------------~~~~------- 401 (432)
T 3ei9_A 377 VFAEILEKTHVVTTPGSGFGP------------------------------------------------GGEG------- 401 (432)
T ss_dssp HHHHHHHHHCEECEEGGGGCG------------------------------------------------GGTT-------
T ss_pred HHHHHHHHCCEEEeCchHhCC------------------------------------------------CCCC-------
Confidence 577888888999999998876 3444
Q ss_pred eeEEEEeecChHHHHHHHHHHHHHH
Q psy13922 477 YHFRTTILPQPEKLKAMLEKFREFH 501 (509)
Q Consensus 477 ~~~Rls~~~~~~~i~~~~~~l~~~~ 501 (509)
++|++++.++++|++++++|++.-
T Consensus 402 -~iRis~~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 402 -FVRVSAFGHRENILEACRRFKQLY 425 (432)
T ss_dssp -EEEEECCSCHHHHHHHHHHHHHHH
T ss_pred -EEEEEecCCHHHHHHHHHHHHHHh
Confidence 999999999999999999998764
No 39
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=5.3e-39 Score=335.45 Aligned_cols=344 Identities=19% Similarity=0.347 Sum_probs=267.2
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCC--CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH-
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQP--ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA- 122 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~--~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~- 122 (509)
..+|+++.|..++|+++++++++.+|+. +++++|++|+|+++++..++++++++|| .|+++.|+|.++...+.
T Consensus 76 ~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd----~Vl~~~p~y~~~~~~~~~ 151 (428)
T 1iay_A 76 IANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGD----AFLVPSPYYPAFNRDLRW 151 (428)
T ss_dssp HHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTC----EEEEESSCCTTHHHHTTT
T ss_pred hcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCC----eEEEccCCCcchHHHHHH
Confidence 4569988889999999999999888866 7789999999999999999999999988 99999999999987554
Q ss_pred hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 123 EFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 123 ~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
..|++++.++.+++.+|.+|++.|++.+++.... .++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.
T Consensus 152 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~ 231 (428)
T 1iay_A 152 RTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYA 231 (428)
T ss_dssp TTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTG
T ss_pred hcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecccc
Confidence 6799999999876556889999999999753221 368999999999999999999999999999999999999999999
Q ss_pred cccccCCCccccHHHHHHHh-CCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhh
Q psy13922 202 DNVYAEGSKFYSFKKVLVEM-GEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALV 280 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (509)
++.+++. .+.++..+..+. .......+++++.|+||.+ |++|+|+||++. .++++++.+.+... +++.+.+
T Consensus 232 ~~~~~~~-~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~-g~~Glr~G~~~~--~~~~~~~~~~~~~~-~~~~~~~--- 303 (428)
T 1iay_A 232 ATVFDTP-QFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM-GLPGFRVGIIYS--FNDDVVNCARKMSS-FGLVSTQ--- 303 (428)
T ss_dssp GGCCSSS-CCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS-SCGGGCEEEEEE--SCHHHHHHHHHHHT-TSCCCHH---
T ss_pred ccccCCC-CccCHHHhccccccccCCCCcEEEEecchhhc-CCCCceEEEEEe--CCHHHHHHHHHHHh-cccCCHH---
Confidence 9877542 344555554220 0000012488899999999 799999999983 47889998886544 3445666
Q ss_pred ccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH-HHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy13922 281 SLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ-FSREKQSVLDSLKQRAKMVADTFNSIE 359 (509)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~ 359 (509)
++.++..+++ + .. ..++++++++.++++++.+.+.|+++
T Consensus 304 -------------------------------~~~a~~~~l~-----~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 343 (428)
T 1iay_A 304 -------------------------------TQYFLAAMLS-----D---EKFVDNFLRESAMRLGKRHKHFTNGLEVV- 343 (428)
T ss_dssp -------------------------------HHHHHHHHTT-----C---HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred -------------------------------HHHHHHHHhc-----C---hHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 5555555554 1 22 22357889999999999999999998
Q ss_pred CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHH
Q psy13922 360 GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIA 439 (509)
Q Consensus 360 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~ 439 (509)
|+.+.++++++|+|+++..... .........+...+++++||.++||..|+.
T Consensus 344 g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~---------------------- 395 (428)
T 1iay_A 344 GIKCLKNNAGLFCWMDLRPLLR------ESTFDSEMSLWRVIINDVKLNVSPGSSFEC---------------------- 395 (428)
T ss_dssp TCCBCCCSSSSEEEEECGGGCS------SSSHHHHHHHHHHHHHTSCEECEEGGGGTC----------------------
T ss_pred CCcccCCCeeEEEEEechhhcC------CCchhHHHHHHHHHHHhCCEEEeCchhhCC----------------------
Confidence 8888888889999987741100 000001234455566667999999987765
Q ss_pred HHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHH
Q psy13922 440 KAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~ 503 (509)
.+.+ ++|++++ .+++++++++++|++++++
T Consensus 396 --------------------------~~~~--------~iRis~~~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 396 --------------------------QEPG--------WFRVCFANMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp --------------------------SSSS--------EEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred --------------------------CCCC--------EEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 2223 8999999 8999999999999998853
No 40
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=4.6e-39 Score=329.22 Aligned_cols=326 Identities=26% Similarity=0.412 Sum_probs=267.5
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+.+++.+.+.. . ..+|++..|..++|+++++++...+|+++++++|++|+|+++++..++++++++||
T Consensus 43 ~~~~v~~a~~~~~~~---~-~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd---- 114 (370)
T 2z61_A 43 TPKPIVDEGIKSLKE---G-KTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGD---- 114 (370)
T ss_dssp CCHHHHHHHHHHHHT---T-CCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTC----
T ss_pred CCHHHHHHHHHHHHc---C-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCC----
Confidence 378999999998876 2 33598888899999999999998889888999999999999999999999998888
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
+|+++.|+|.++...++..|.+++.++ +|++.|++.+++ ++++|++++|+||||.+++.+ |++
T Consensus 115 ~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l~~-----~~~~v~~~~p~nptG~~~~~~----l~~ 177 (370)
T 2z61_A 115 EVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEALSD-----KTKAIIINSPSNPLGEVIDRE----IYE 177 (370)
T ss_dssp EEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHCCS-----SEEEEEEESSCTTTCCCCCHH----HHH
T ss_pred EEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhccc-----CceEEEEcCCCCCcCcccCHH----HHH
Confidence 999999999999999999999999887 589999998876 789999999999999999966 999
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
+|+++|+++|+||+|.++.+++ .+.++.++. + ...++++++|+||.+ |++|+|+||++ .++++++.+.
T Consensus 178 ~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~-~-----~~~~~i~~~s~sK~~-~~~G~r~G~~~---~~~~~~~~~~ 245 (370)
T 2z61_A 178 FAYENIPYIISDEIYNGLVYEG--KCYSAIEFD-E-----NLEKTILINGFSKLY-AMTGWRIGYVI---SNDEIIEAIL 245 (370)
T ss_dssp HHHHHCSEEEEECTTTTCBSSS--CCCCGGGTC-T-----TCSSEEEEEESTTTT-TCGGGCCEEEE---CCHHHHHHHH
T ss_pred HHHHcCCEEEEEcchhhcccCC--CCcCHHHcc-C-----CCCcEEEEecChhcc-CCccceEEEEE---ECHHHHHHHH
Confidence 9999999999999999988764 233433321 0 123488899999999 79999999998 7889999998
Q ss_pred Hhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHH
Q psy13922 266 KSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSL 344 (509)
Q Consensus 266 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (509)
.... ...+++.+ .+.++..+++ ....++++++++.+
T Consensus 246 ~~~~~~~~~~~~~----------------------------------~~~a~~~~l~---------~~~~~~~~~~~~~~ 282 (370)
T 2z61_A 246 KLQQNLFISAPTI----------------------------------SQYAALKAFE---------KETEREINSMIKEF 282 (370)
T ss_dssp HHHHHHTSSSCHH----------------------------------HHHHHGGGGS---------HHHHHHHHHHHHHH
T ss_pred HHHhhcccCCCHH----------------------------------HHHHHHHHHh---------ccCHHHHHHHHHHH
Confidence 7665 33456666 4555555543 10134578889999
Q ss_pred HHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCcccc
Q psy13922 345 KQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHF 424 (509)
Q Consensus 345 ~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~ 424 (509)
+++++.+.+.|+++ |+++..+++++++|++++ + +..++...+++++||.+.||..|+.
T Consensus 283 ~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~------------~--~~~~~~~~l~~~~gi~v~~g~~f~~------- 340 (370)
T 2z61_A 283 DRRRRLVLKYVKDF-GWEVNNPIGAYYVFPNIG------------E--DGREFAYKLLKEKFVALTPGIGFGS------- 340 (370)
T ss_dssp HHHHHHHHHHHHHT-TCBCCCCCBTTEECCBCS------------S--CHHHHHHHHHHHHCEECEEGGGGCG-------
T ss_pred HHHHHHHHHHHHHc-CCeecCCCcceEEEEecC------------C--CHHHHHHHHHHhCCEEEeCchhhCC-------
Confidence 99999999999998 888888889999997665 1 2445555666688999999987764
Q ss_pred ccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHH
Q psy13922 425 RQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 425 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~ 502 (509)
.+.+ ++|++++.++++|++++++|+++++
T Consensus 341 -----------------------------------------~~~~--------~~Ri~~~~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 341 -----------------------------------------KGKN--------YIRISYANSYENIKEGLERIKEFLN 369 (370)
T ss_dssp -----------------------------------------GGSS--------BEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred -----------------------------------------CCCC--------EEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 2223 8999999999999999999998874
No 41
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=1.1e-39 Score=334.33 Aligned_cols=326 Identities=21% Similarity=0.301 Sum_probs=266.9
Q ss_pred HHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC
Q psy13922 33 RAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP 112 (509)
Q Consensus 33 a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p 112 (509)
++.+.+.. .... |++..|..++|+++++++. .+++++|++|+|+++++..++++++++|| +|+++.|
T Consensus 47 ~~~~~~~~---~~~~-y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd----~Vl~~~~ 113 (375)
T 3op7_A 47 DFYKKLQG---TKLN-YGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGD----HVISLYP 113 (375)
T ss_dssp HHHHHHHT---SCCS-SCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTC----EEEEEES
T ss_pred HHHHHHhc---CCcC-CCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCC----EEEEeCC
Confidence 45555555 4444 9999999999999999873 35778999999999999999999999998 9999999
Q ss_pred CChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCc
Q psy13922 113 QYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKL 192 (509)
Q Consensus 113 ~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i 192 (509)
+|.++...++..|.+++.++.+++.+|.+|++.|++++++ ++++|++++|+||||.+++.+++++|+++|++||+
T Consensus 114 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~ 188 (375)
T 3op7_A 114 TYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP-----TTKMICINNANNPTGAVMDRTYLEELVEIASEVGA 188 (375)
T ss_dssp SCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-----TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTC
T ss_pred CchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc-----CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999999999999999998766788999999999976 79999999999999999999999999999999999
Q ss_pred EEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhc-c
Q psy13922 193 FLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISA-M 271 (509)
Q Consensus 193 ~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~-~ 271 (509)
++|+||+|..+.++ ...++.+.. .++++++|+||.+ |++|+|+||++ .++++++.+...... .
T Consensus 189 ~li~De~~~~~~~~---~~~~~~~~~---------~~~i~~~s~sK~~-~~~G~r~G~v~---~~~~l~~~~~~~~~~~~ 252 (375)
T 3op7_A 189 YILSDEVYRSFSEL---DVPSIIEVY---------DKGIAVNSLSKTY-SLPGIRIGWVA---ANHQVTDILRDYRDYTM 252 (375)
T ss_dssp EEEEECCSCCCSSS---CCCCHHHHC---------TTEEEEEESSSSS-SCGGGCCEEEE---CCHHHHHHHTTTGGGTT
T ss_pred EEEEEccccccccc---CCCchhhhc---------CCEEEEeEChhhc-CCcccceEEEE---eCHHHHHHHHHHHhhhc
Confidence 99999999998775 233443321 2378899999999 78999999998 799999999876653 3
Q ss_pred cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q psy13922 272 LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMV 351 (509)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 351 (509)
.+.+.+ .+.++..++ ....+++++.++.++++++.+
T Consensus 253 ~~~~~~----------------------------------~~~~~~~~l----------~~~~~~~~~~~~~~~~~~~~l 288 (375)
T 3op7_A 253 ICAGVF----------------------------------DDLVAQLAL----------AHYQEILERNRHILEENLAIL 288 (375)
T ss_dssp SCCCHH----------------------------------HHHHHHHHH----------HTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcH----------------------------------HHHHHHHHH----------hccHHHHHHHHHHHHHHHHHH
Confidence 344454 333333222 223334778888899999999
Q ss_pred HHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhh
Q psy13922 352 ADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWR 431 (509)
Q Consensus 352 ~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~ 431 (509)
.+.|++.+++.+..+.++++.|+.++.+. +..+++..+++++||.+.||..|+.
T Consensus 289 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ll~~~gi~v~~g~~~~~-------------- 342 (375)
T 3op7_A 289 DQWIEEEPLVSYIRPAVVSTSFVKIAVDM------------PMEDFCLQLLQEHGVLLVPGNRFER-------------- 342 (375)
T ss_dssp HHHHHHCTTEEECCCSSSSCEEEEECCSS------------CHHHHHHHHHHHHCEECEEGGGGTC--------------
T ss_pred HHHHhhCCCceEecCCCeEEEeEEcCCCC------------CHHHHHHHHHHhCCEEEeChhhhCC--------------
Confidence 99999988898888899988887775321 3455567777899999999987765
Q ss_pred hhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHHHHHh
Q psy13922 432 HYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
++ ++|++++.+.++|++++++|.++++++.+
T Consensus 343 ----------------------------------~~----------~iRi~~~~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 343 ----------------------------------DG----------YVRLGFACEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp ----------------------------------TT----------EEEECCCSCHHHHHHHHHHHHHHHGGGC-
T ss_pred ----------------------------------CC----------eEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 34 99999998889999999999999876543
No 42
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=6.3e-39 Score=332.23 Aligned_cols=371 Identities=20% Similarity=0.314 Sum_probs=281.7
Q ss_pred HHHHHHHHhhc---CC--CCC----CCCC---CC-HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCC
Q psy13922 6 SLSLQVLALVS---LP--QLF----DDPR---FP-DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQ 72 (509)
Q Consensus 6 ~~~~~~~~~~~---~~--~~~----~~~~---~p-~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~ 72 (509)
+.++.++..+. .+ .++ |.|. +| +.+.+++.+++.... .... |++..|..++|+++++++.+.+|+
T Consensus 17 ~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~-~~~~-y~~~~~~~~l~~~la~~~~~~~g~ 94 (407)
T 2zc0_A 17 SALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEP-KSVM-YTPANGIPELREELAAFLKKYDHL 94 (407)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCG-GGGS-CCCTTCCHHHHHHHHHHHHHHSCC
T ss_pred hHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcc-cccc-CCCCCCCHHHHHHHHHHHHHhcCC
Confidence 34566666554 34 332 3333 23 578888988887622 1235 888889999999999999888887
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 73 PADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 73 ~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
++++++|++|+|+++++..++++++++|| .|+++.|+|.++...++..|.+++.++.+++ ++|++.|++.++.
T Consensus 95 ~~~~~~v~~t~g~t~a~~~~~~~~~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~ 167 (407)
T 2zc0_A 95 EVSPENIVITIGGTGALDLLGRVLIDPGD----VVITENPSYINTLLAFEQLGAKIEGVPVDND---GMRVDLLEEKIKE 167 (407)
T ss_dssp CCCGGGEEEESHHHHHHHHHHHHHCCTTC----EEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHHHHHHH
T ss_pred CCCcceEEEecCHHHHHHHHHHHhcCCCC----EEEEeCCChHHHHHHHHHcCCEEEEcccCCC---CCCHHHHHHHHHh
Confidence 78889999999999999999999998888 9999999999999999999999999998754 4899999999972
Q ss_pred hhcc-CCceEEE-EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCcee
Q psy13922 153 ARKH-CNPRAIV-IINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMEL 230 (509)
Q Consensus 153 ~~~~-~~~~~iv-i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 230 (509)
.... .++++|+ +++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. .+.++..+. . ..++
T Consensus 168 ~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~----~---~~~~ 239 (407)
T 2zc0_A 168 LKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGG-DIVPLKALD----N---EGRV 239 (407)
T ss_dssp HHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCS-SCCCGGGGC----S---SCCE
T ss_pred hhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCC-CCCChhhcC----C---CCCE
Confidence 1101 2588875 689999999999999999999999999999999999999987542 233443321 1 2248
Q ss_pred EEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCc
Q psy13922 231 ASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQ 309 (509)
Q Consensus 231 i~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (509)
++++|+||.+ | +|+|+||++ .++++++.+...... ..+.+.+
T Consensus 240 i~~~s~sK~~-~-~G~r~G~~~---~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 282 (407)
T 2zc0_A 240 IVAGTLSKVL-G-TGFRIGWII---AEGEILKKVLMQKQPIDFCAPAI-------------------------------- 282 (407)
T ss_dssp EEEEESTTTT-C-TTSCCEEEE---CCHHHHHHHHHHHTTTTSSSCHH--------------------------------
T ss_pred EEEccccccc-C-CCcceEEEe---cCHHHHHHHHHHHHhhcCCCCHH--------------------------------
Confidence 8999999999 7 999999998 689999998876653 2344555
Q ss_pred ccccchhhcccCCCCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHhc-CCCCeeccCCceeEEeecCCCCHHHHHHHh
Q psy13922 310 SVGQTVMDCVVNPPQPGEPSYEQFS-REKQSVLDSLKQRAKMVADTFNS-IEGMSCNPVQGAMYAFPQMKLPAKAIAKAK 387 (509)
Q Consensus 310 ~~~~~al~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~ 387 (509)
.+.++..+++ .. .+. ++++++++.++++++.+.+.|++ .|++.+..+.+++++|++++ .
T Consensus 283 --~~~~~~~~l~-----~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~--~------- 343 (407)
T 2zc0_A 283 --SQYIALEYLK-----RG---YFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLP--E------- 343 (407)
T ss_dssp --HHHHHHHHHH-----TT---HHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECS--T-------
T ss_pred --HHHHHHHHHH-----cC---CchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcC--C-------
Confidence 3333333332 11 122 34677888889999999999987 57888777888999998774 1
Q ss_pred hcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCC
Q psy13922 388 AEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPG 467 (509)
Q Consensus 388 ~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (509)
+. +...+...+++++||.+.||..|.... .+
T Consensus 344 --~~-~~~~l~~~l~~~~gi~v~~g~~~~~~~----------------------------------------------~~ 374 (407)
T 2zc0_A 344 --GA-DGISFANELMEREGVVVVPGKPFYTDE----------------------------------------------SG 374 (407)
T ss_dssp --TC-CHHHHHHHHHHHTCEECBCSGGGCSSS----------------------------------------------CC
T ss_pred --CC-CHHHHHHHHHHhCCeEEECchhccCCC----------------------------------------------CC
Confidence 22 344555555555599999998876510 12
Q ss_pred CCCCCCCCceeEEEEeec-ChHHHHHHHHHHHHHHHHHHh
Q psy13922 468 AGFGQVPGTYHFRTTILP-QPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 468 ~~~~~~~~~~~~Rls~~~-~~~~i~~~~~~l~~~~~~~~~ 506 (509)
.+ ++|++++. +++++++++++|+++++++.+
T Consensus 375 ~~--------~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 375 KN--------AIRLNFSRPSKEEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp TT--------EEEEECSSSCTTHHHHHHHHHHHHHHHHC-
T ss_pred CC--------eEEEEeCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 22 89999995 799999999999999987654
No 43
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=2.4e-39 Score=336.35 Aligned_cols=345 Identities=19% Similarity=0.227 Sum_probs=266.1
Q ss_pred CCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCC
Q psy13922 25 RFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 25 ~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~ 104 (509)
..|+.+.+++.+.... ...+|++..|.+++|+++++++...++.. ++++|++|+|+++++..+++.++++||
T Consensus 55 ~~~~~v~~a~~~~~~~----~~~~Y~~~~g~~~lr~~la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~~~gd--- 126 (413)
T 3t18_A 55 IALPSVYDRLDEMDRS----HIASYAPIEGEKDYRKIVIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYLDEGD--- 126 (413)
T ss_dssp CCCHHHHHHHHHSCHH----HHHSCCCTTCCHHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHCCSSC---
T ss_pred CChHHHHHHHHhcCcc----cccCcCCCCCCHHHHHHHHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhcCCCC---
Confidence 3467788777654332 23459998999999999999997665532 445999999999999999999999998
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCce-EEEEeCC-CCCCCCCCCHHHHHH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPR-AIVIINP-GNPTGQVLTKENIQD 182 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~-~ivi~~p-~NPtG~~~s~~~l~~ 182 (509)
.|+++.|+|.++...++..|.+++.++..++. |.+|++.|++.+++.... +++ ++++++| |||||.+++.+++++
T Consensus 127 -~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~-~~~~~vi~~~p~~NPtG~~~~~~~l~~ 203 (413)
T 3t18_A 127 -PLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNIDVYKEAIDEGIRD-SDRIASLINSPGNNPTGYSLSDEEWDE 203 (413)
T ss_dssp -EEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCHHHHHHHHHHHHHH-CSEEEEEEECSSCTTTCCCCCHHHHHH
T ss_pred -EEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CCcCHHHHHHHHHHHhhc-CCCEEEEEeCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999985443 789999999999752111 466 7778999 999999999999999
Q ss_pred HHHHHH------HCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 183 IIKFAH------REKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 183 l~~ia~------~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
|+++|+ ++|++||+||+|.+|.+++. ...++.....++. ++..+|+++|+||.+ |++|+|+||++..+.
T Consensus 204 l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~~---~~~~~i~~~S~sK~~-~~~G~riG~~~~~~~ 278 (413)
T 3t18_A 204 VITFLKEKAEDKDKKITLIVDVAYLEFAGDGD-QQRKFFEKFSNLP---RNLFVVVAFSMSKSH-TAYGLRSGAAVGISS 278 (413)
T ss_dssp HHHHHHHHTTSTTCEEEEEEECTTGGGSSSSS-TTTGGGGGGTTCC---TTEEEEEEEEHHHHT-TCGGGCCEEEEEEES
T ss_pred HHHHHHHHhhccCCcEEEEEecccccccCChh-hHHHHHHHHhhcC---CCeeEEEEEecCccC-CCcCcCcEEEEEecC
Confidence 999999 89999999999999988643 2333333222221 122358889999999 799999999982122
Q ss_pred CHHHHHHHHHhhh-----cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 257 DPGVKAMLHKSIS-----AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 257 ~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
++++++.+..... .+..++.+ ++.++..+++ ++.+.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~-----~~~~~ 319 (413)
T 3t18_A 279 SKEIIEEFEASLAHSARCNWSNGTHA----------------------------------AQNILIELER-----AENKK 319 (413)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSCCHH----------------------------------HHHHHHHTTS-----HHHHH
T ss_pred CHHHHHHHHHHHHHhhhccccCCChH----------------------------------HHHHHHHHhc-----ChHHH
Confidence 8999999887643 12345666 5666555554 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 332 QFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
.+.++.+++++.++++++.+.+.|+++ |+.+.++++++|+|+++. +..++. ..|.++||.++|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~---------------~~~~~~-~~l~~~gv~v~~ 382 (413)
T 3t18_A 320 IYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIPYFGGFFTFIPTD---------------KAFDIV-KDLEKENIFTIP 382 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSSSCEEEECS---------------CHHHHH-HHHHHTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccCCCceEEEEeCCC---------------CHHHHH-HHHHhCCEEEec
Confidence 255667888999999999999999998 899999999999997653 244444 566788999997
Q ss_pred CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHH
Q psy13922 412 GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKL 490 (509)
Q Consensus 412 g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i 490 (509)
|. + ++||+++ .+++++
T Consensus 383 g~-------------------------------------------------------~--------~iRis~~~~~~~~~ 399 (413)
T 3t18_A 383 SA-------------------------------------------------------K--------GIRVAICGVGEEKI 399 (413)
T ss_dssp CS-------------------------------------------------------S--------EEEECTTTSCGGGH
T ss_pred CC-------------------------------------------------------C--------ceEEEEeeCCHHHH
Confidence 52 2 8999998 567776
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy13922 491 KAMLEKFREFHEEFLAK 507 (509)
Q Consensus 491 ~~~~~~l~~~~~~~~~~ 507 (509)
+++|.++++++.++
T Consensus 400 ---l~~l~~~l~~~~~~ 413 (413)
T 3t18_A 400 ---PKLVQRLAFYTNKK 413 (413)
T ss_dssp ---HHHHHHHHHHHHC-
T ss_pred ---HHHHHHHHHHHhcC
Confidence 89999999887653
No 44
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=3.3e-39 Score=335.90 Aligned_cols=347 Identities=16% Similarity=0.206 Sum_probs=267.1
Q ss_pred CCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCC
Q psy13922 25 RFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 25 ~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~ 104 (509)
..|+.+.+++.+.... ....|++..|.+++|+++++++...++.. .+++|++|+|+++++..++++++++||
T Consensus 56 ~~~~~v~~a~~~~~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd--- 127 (418)
T 3rq1_A 56 VFLKTVKEEYLSLSDS----EHVGYAPIAGIPDFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGD--- 127 (418)
T ss_dssp CCCHHHHHHHHTCCHH----HHHSCCCTTCCHHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTC---
T ss_pred cccHHHHHHHHHhccc----ccCCCCCCCChHHHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCC---
Confidence 3467777777654432 23459999999999999999997765522 233999999999999999999999998
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCce-EEEEeCC-CCCCCCCCCHHHHHH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPR-AIVIINP-GNPTGQVLTKENIQD 182 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~-~ivi~~p-~NPtG~~~s~~~l~~ 182 (509)
+|+++.|+|.++...++..|.+++.++.+++. |.+|++.|++.+++.... +++ ++++++| |||||.+++.+++++
T Consensus 128 -~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~-~~~~~vi~~~p~~NPtG~~~~~~~l~~ 204 (418)
T 3rq1_A 128 -EVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFNHEAFQNRVNELAAK-QTNVVVIFNTPGNNPTGYSIEDKDWDS 204 (418)
T ss_dssp -EEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBCHHHHHHHHHHHHHH-CSEEEEEEECSSCTTTCCCCCHHHHHH
T ss_pred -EEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcCHHHHHHHHHHhhcc-CCCEEEEEeCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999986553 789999999999752111 355 7788999 999999999999999
Q ss_pred HHHHHH------HCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 183 IIKFAH------REKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 183 l~~ia~------~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
|+++|+ ++|+++|+||+|.+|.+++. ...++.....++ .++..+++++||||.+ |++|+|+||++.++.
T Consensus 205 l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~---~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~ 279 (418)
T 3rq1_A 205 ILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKD-EVRAFFNKFSHL---PKEILTCVCYSLSKGF-TMYGQRVGAMIGISD 279 (418)
T ss_dssp HHHHHHHHHHTSSCEEEEEEECTTGGGSSCHH-HHHGGGGGGTTC---CTTEEEEEEEESTTTT-TCCSSCCEEEEEEES
T ss_pred HHHHHHHhhhccCCCeEEEEecccccccCChH-HHHHHHHHHHhc---CCCceEEEEEeCCCCC-cCcCCcceEEEEEeC
Confidence 999999 89999999999999886531 112222211111 1122368889999999 799999999982223
Q ss_pred CHHHHHHHHHhhh-----cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 257 DPGVKAMLHKSIS-----AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 257 ~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
++++++.+..... .+..++.+ ++.++..+++. .+.++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~----~~~~~ 321 (418)
T 3rq1_A 280 DEEIADEFFEVNKSTSRATWSNICRP----------------------------------AMRTMANIVAD----PAKFK 321 (418)
T ss_dssp SHHHHHHHHHHHHHHHHHHTSSCCHH----------------------------------HHHHHHHHHTC----HHHHH
T ss_pred CHHHHHHHHHHHHHHHhhccCCCchH----------------------------------HHHHHHHHhCC----HHHHH
Confidence 8999999887643 12345666 55555544441 11123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 332 QFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
.+.++++++++.++++++.+.+.|+++ |+++.++++++|+|+++. +..++ .+.|.++||.++|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~---------------~~~~~-~~~l~~~gi~v~~ 384 (418)
T 3rq1_A 322 EYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLPYRGGFFITIPTD---------------SANAI-CEELKKEHIYVIA 384 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCCCSSSEEEEECT---------------THHHH-HHHHHHTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCceEEEEcCCC---------------CHHHH-HHHHHhCCEEEec
Confidence 455567788899999999999999998 899999999999997663 23444 4567889999997
Q ss_pred CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHH
Q psy13922 412 GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKL 490 (509)
Q Consensus 412 g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i 490 (509)
|. + ++|||++ .++++|
T Consensus 385 g~-------------------------------------------------------~--------~iRis~~~~~~~~i 401 (418)
T 3rq1_A 385 LA-------------------------------------------------------N--------GIRIAACGIPKCQM 401 (418)
T ss_dssp CS-------------------------------------------------------S--------EEEEEGGGSCHHHH
T ss_pred CC-------------------------------------------------------C--------CeEEEEecCCHHHH
Confidence 52 2 8999998 699999
Q ss_pred HHHHHHHHHHHHHHH
Q psy13922 491 KAMLEKFREFHEEFL 505 (509)
Q Consensus 491 ~~~~~~l~~~~~~~~ 505 (509)
++++++|+++++++.
T Consensus 402 ~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 402 TGLAEKIYNAMKSLG 416 (418)
T ss_dssp TTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999997653
No 45
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.8e-39 Score=338.08 Aligned_cols=350 Identities=15% Similarity=0.156 Sum_probs=274.5
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh--
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-- 97 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-- 97 (509)
+.|.+ |+.+++++.+.+.. ....+|++..|..++|++++++++..+|+++++++|++|+|+++++..++++++
T Consensus 52 ~~~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~ 128 (437)
T 3g0t_A 52 GVPGLPAPQIGIETEIQKLRE---GVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRT 128 (437)
T ss_dssp CSCCSCCCHHHHHHHHHHHHH---TGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTS
T ss_pred cCCCCCCCHHHHHHHHHHHhC---CcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcC
Confidence 55555 68999999999987 443569999899999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
++|| +.+|+++.|+|.++...++..|++++.++.++ .+|.+|++.|++.++.. ++++|++++||||||.+++.
T Consensus 129 ~~gd--~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~----~~~~v~l~~p~nptG~~~~~ 201 (437)
T 3g0t_A 129 HKNR--EYGTLFIDPGFNLNKLQCRILGQKFESFDLFE-YRGEKLREKLESYLQTG----QFCSIIYSNPNNPTWQCMTD 201 (437)
T ss_dssp CTTC--SCCEEEEESCCHHHHHHHHHHTCCCEEEEGGG-GCTTHHHHHHHHHHTTT----CCCEEEEESSCTTTCCCCCH
T ss_pred CCCC--ccEEEEeCCCcHhHHHHHHHcCCEEEEEeecC-CCCccCHHHHHHHHhcC----CceEEEEeCCCCCCCCcCCH
Confidence 7663 12799999999999999999999999999973 46788999999999432 79999999999999999999
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc---ccH-HHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF---YSF-KKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
+++++|+++|+++|++||+||+|+++.+++.... +++ ..+ .+. ..++++++|+||.+ |++|+|+||++
T Consensus 202 ~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~i~~~s~sK~~-~~~G~r~G~~~- 273 (437)
T 3g0t_A 202 EELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSV-ANY-----TDNYILALSSSKAF-SYAGQRIGVLM- 273 (437)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCG-GGT-----CSCEEEEEESTTTT-SCGGGCCEEEE-
T ss_pred HHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhcc-CCC-----CCcEEEEEcCccCC-CCccceeEEEE-
Confidence 9999999999999999999999999887632222 011 111 111 23488899999999 79999999998
Q ss_pred ecCCHHHHH-H-----------------HHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccc
Q psy13922 254 INLDPGVKA-M-----------------LHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQT 314 (509)
Q Consensus 254 ~~~~~~~~~-~-----------------l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (509)
.++++++ . +..... ...+++.+ .+.
T Consensus 274 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~ 317 (437)
T 3g0t_A 274 --ISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHS----------------------------------AQW 317 (437)
T ss_dssp --ECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHH----------------------------------HHH
T ss_pred --ECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHH----------------------------------HHH
Confidence 6888888 6 554443 23455665 444
Q ss_pred hhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec-------cCCceeEEeecCCCCHHHHHHHh
Q psy13922 315 VMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN-------PVQGAMYAFPQMKLPAKAIAKAK 387 (509)
Q Consensus 315 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-------~~~~g~~~~~~~~~~~~~~~~~~ 387 (509)
++..+++. ...+.++++++++.++++++.+.+.|+++ |+.+. ++.+++++|++++
T Consensus 318 a~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------- 379 (437)
T 3g0t_A 318 GMAAMLKA-------CNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYK---------- 379 (437)
T ss_dssp HHHHHHHH-------HHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEET----------
T ss_pred HHHHHHhC-------cHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecC----------
Confidence 44443320 01111117788899999999999999999 88887 4488999997775
Q ss_pred hcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCC
Q psy13922 388 AEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPG 467 (509)
Q Consensus 388 ~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (509)
+. +...+.. .|.++||.+.||..|+. ..
T Consensus 380 --~~-~~~~l~~-~L~~~gi~v~~~~~~~~------------------------------------------------~~ 407 (437)
T 3g0t_A 380 --GM-DSSKLIE-KFVRYGMCAITLKTTGS------------------------------------------------KR 407 (437)
T ss_dssp --TC-CHHHHHH-HHHHTTEECEESTTTTC------------------------------------------------CC
T ss_pred --CC-CHHHHHH-HHHHcCeEEeeccccCC------------------------------------------------CC
Confidence 11 2444444 44566999999988765 22
Q ss_pred CCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHH
Q psy13922 468 AGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 468 ~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~ 503 (509)
.+ ++|+|++ .++++|++++++|++++++
T Consensus 408 ~~--------~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 408 NE--------AMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp TT--------CEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred CC--------EEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 22 8999999 5999999999999998753
No 46
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.5e-38 Score=328.57 Aligned_cols=363 Identities=19% Similarity=0.285 Sum_probs=282.2
Q ss_pred HHHHHHHHhhcCCCCC----CCCC---C-CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC
Q psy13922 6 SLSLQVLALVSLPQLF----DDPR---F-PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ 77 (509)
Q Consensus 6 ~~~~~~~~~~~~~~~~----~~~~---~-p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~ 77 (509)
+.++.++...+.+.++ +.|. + ++.+.+++.+++.+.. ....+|++..|..++|+++++++ | ++++
T Consensus 20 ~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~y~~~~~~~~l~~~la~~~----g--~~~~ 92 (397)
T 2zyj_A 20 STIRELLKLTQRPGILSFAGGLPAPELFPKEEAAEAAARILREKG-EVALQYSPTEGYAPLRAFVAEWI----G--VRPE 92 (397)
T ss_dssp CHHHHHHHHHTSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHH-HHHTSCCCTTCCHHHHHHHHHHH----T--SCGG
T ss_pred hHHHHHHhhccCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcc-hhhhCCCCCCCCHHHHHHHHHHh----C--CChh
Confidence 3567777776665554 3332 2 4578888888887521 12345988888999999999999 3 5678
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccC
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHC 157 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~ 157 (509)
+|++|+|+++++..++++++++|| +|+++.|+|.++...++..|.+++.++.+++ ++|++.|++.+++.
T Consensus 93 ~v~~~~g~~~al~~~~~~~~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---~~d~~~l~~~l~~~---- 161 (397)
T 2zyj_A 93 EVLITTGSQQALDLVGKVFLDEGS----PVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---GPDLDALEEVLKRE---- 161 (397)
T ss_dssp GEEEESHHHHHHHHHHHHHCCTTC----EEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECHHHHHHHHHHC----
T ss_pred hEEEeccHHHHHHHHHHHhCCCCC----EEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---CCCHHHHHHHHhhc----
Confidence 999999999999999999998888 9999999999999999999999999998764 48999999999863
Q ss_pred CceEEE-EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec
Q psy13922 158 NPRAIV-IINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC 236 (509)
Q Consensus 158 ~~~~iv-i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 236 (509)
++++|+ +++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. .+.++..+..+.+ ..++++++|+
T Consensus 162 ~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~----~~~~i~~~s~ 236 (397)
T 2zyj_A 162 RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEA-RLPSLFELAREAG----YPGVIYLGSF 236 (397)
T ss_dssp CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSC-CCCCHHHHHHHHT----CCCEEEEEES
T ss_pred CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCC-CCCchhhhCcccC----CCeEEEEecc
Confidence 688875 689999999999999999999999999999999999999988643 3455665533210 0248999999
Q ss_pred ccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccch
Q psy13922 237 SKGYMGECGLRGGYSEVINLDPGVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTV 315 (509)
Q Consensus 237 SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 315 (509)
||.+ | +|+|+||++ .++++++.+...... ..+.+.+ .+.+
T Consensus 237 sK~~-~-~G~r~G~~~---~~~~~~~~l~~~~~~~~~~~~~~----------------------------------~~~a 277 (397)
T 2zyj_A 237 SKVL-S-PGLRVAFAV---AHPEALQKLVQAKQGADLHTPML----------------------------------NQML 277 (397)
T ss_dssp TTTT-C-GGGCCEEEE---CCHHHHHHHHHHHHHHHSSCCHH----------------------------------HHHH
T ss_pred cccc-c-ccceeEEEe---cCHHHHHHHHHHHHhhcCCCCHH----------------------------------HHHH
Confidence 9999 7 999999998 689999988876542 2344666 4444
Q ss_pred hhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCC
Q psy13922 316 MDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS-IE-GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCP 393 (509)
Q Consensus 316 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 393 (509)
+..+++ + ..+ ++++++++.++++++.+.+.|++ +| |+.+..+.+++++|++++. +. +
T Consensus 278 ~~~~l~-----~---~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~-----------~~-~ 336 (397)
T 2zyj_A 278 VHELLK-----E---GFS-ERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPK-----------GL-S 336 (397)
T ss_dssp HHHHHT-----T---THH-HHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECST-----------TC-C
T ss_pred HHHHHH-----h---CCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCC-----------CC-C
Confidence 444444 1 123 45788899999999999999987 67 6888888889999987751 11 2
Q ss_pred cHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCC
Q psy13922 394 SVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQV 473 (509)
Q Consensus 394 ~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (509)
..++...++ ++||.+.||..|+... .+.+
T Consensus 337 ~~~~~~~l~-~~gi~v~~g~~f~~~~----------------------------------------------~~~~---- 365 (397)
T 2zyj_A 337 AEGLFRRAL-EENVAFVPGGPFFANG----------------------------------------------GGEN---- 365 (397)
T ss_dssp HHHHHHHHH-HTTEEEEESGGGCTTS----------------------------------------------CCTT----
T ss_pred HHHHHHHHH-HCCCEEechHHhcCCC----------------------------------------------CCCC----
Confidence 444444554 5599999998876510 1222
Q ss_pred CCceeEEEEeec-ChHHHHHHHHHHHHHHHHHHh
Q psy13922 474 PGTYHFRTTILP-QPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 474 ~~~~~~Rls~~~-~~~~i~~~~~~l~~~~~~~~~ 506 (509)
++|++++. ++++|++++++|+++++++.+
T Consensus 366 ----~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 366 ----TLRLSYATLDREGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp ----EEEEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----eEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 89999994 799999999999999988764
No 47
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=3.7e-39 Score=333.45 Aligned_cols=313 Identities=15% Similarity=0.207 Sum_probs=240.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE--eCCHHHHHHHHHHHhh---cCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL--SAGASDGIKSVLKLLI---EDVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~--t~G~~~al~~~~~~l~---~~gd 101 (509)
.+.+.+++.+.+.. ....+|++..|.+++|+++++++..++|+.+++++|++ |+|++++++.++..+. ++||
T Consensus 48 ~~~v~~a~~~~~~~---~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd 124 (401)
T 7aat_A 48 LNCVRKAEAMIAAK---KMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSR 124 (401)
T ss_dssp CHHHHHHHHHHHHT---TCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCC
T ss_pred hHHHHHHHHHhccc---ccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCC
Confidence 34677777776654 23445999999999999999999988887788999987 9999999999988775 7888
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
+|+++.|+|.++...++..|.+++.++.++..++++|++.+++.+++. .++++++++++||||||.+++.++++
T Consensus 125 ----~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~~v~i~~p~NPtG~~~~~~~l~ 198 (401)
T 7aat_A 125 ----DVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKI--PEKSIILLHACAHNPTGVDPRQEQWK 198 (401)
T ss_dssp ----EEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTS--CTTCEEEEESSSCTTTCCCCCHHHHH
T ss_pred ----EEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhC--CCCcEEEEeCCCCCCCCCCCCHHHHH
Confidence 999999999999999999999999999875556799999988888752 12688899999999999999999999
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCC-ccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH-
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGS-KFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG- 259 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~- 259 (509)
+|+++|++||+++|+||+|.++.+++.. ...++..+. +. ..++++++|+||.| |++|+|+||++++.++++
T Consensus 199 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~-----~~~~i~~~S~sK~~-~~~G~RiG~l~~~~~~~~~ 271 (401)
T 7aat_A 199 ELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFI-EQ-----GIDVVLSQSYAKNM-GLYGERAGAFTVICRDAEE 271 (401)
T ss_dssp HHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH-HT-----TCCCEEEEECTTTS-CCGGGCEEEEEEECSSHHH
T ss_pred HHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHH-hc-----CCcEEEEecCCccc-ccccCceEEEEEEeCCHHH
Confidence 9999999999999999999999875310 122333322 22 23489999999999 799999999874445776
Q ss_pred ---HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch-HHHH
Q psy13922 260 ---VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY-EQFS 334 (509)
Q Consensus 260 ---~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~-~~~~ 334 (509)
++..+..... .+.+++.. ++.++..+++ ++.+ ..|.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~l~-----~~~~~~~~~ 312 (401)
T 7aat_A 272 AKRVESQLKILIRPMYSNPPMN----------------------------------GARIASLILN-----TPELRKEWL 312 (401)
T ss_dssp HHHHHHHHHHHHHHHHSSCCHH----------------------------------HHHHHHHHHH-----CHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCChH----------------------------------HHHHHHHHhC-----CHHHHHHHH
Confidence 4455544433 33445554 3333332322 1111 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---CCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 335 REKQSVLDSLKQRAKMVADTFNSI---EGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 335 ~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
++++++++.++++++.+.+.|+++ +++.+..|++++|+|++++ .+++..+++++||++.|
T Consensus 313 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~ll~~~gi~v~~ 375 (401)
T 7aat_A 313 VEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK-----------------PEQVERLTKEFSIYMTK 375 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC-----------------HHHHHHHHHHHCEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC-----------------HHHHHHHHHhCCEeccC
Confidence 668899999999999999999987 2477778999999996543 22357788899999863
No 48
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=2.9e-39 Score=337.70 Aligned_cols=346 Identities=14% Similarity=0.201 Sum_probs=271.6
Q ss_pred CCC-CC--CHHH--HHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCc---EEEeCCHHHHHHHHH
Q psy13922 22 DDP-RF--PDDV--KQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQD---VILSAGASDGIKSVL 93 (509)
Q Consensus 22 ~~~-~~--p~~v--~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~---i~~t~G~~~al~~~~ 93 (509)
|.| .+ |+.+ ++++.+.+.. ....+|++..|..++|+++++++.+++ +++++++ |++|+|+++++..++
T Consensus 55 g~~~~~~~~~~~~~~~a~~~~~~~---~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g~~~al~~~~ 130 (430)
T 2x5f_A 55 GMATNKDGKMFASSLDAMFNDLTP---DEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNALTHGLSLVG 130 (430)
T ss_dssp SSCEETTEECCCHHHHTTBSSCCG---GGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESHHHHHHHHHH
T ss_pred eeccCCCCchhhHHHHHHHHhcCc---ccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcCCchHHHHHHH
Confidence 555 44 4555 5555444432 134569998899999999999998774 6678888 999999999999999
Q ss_pred HHhhcCCCCCCCeEEEcCCCChhHHHHHHh-cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 94 KLLIEDVDGKKPGVLIPIPQYPLYSASLAE-FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 94 ~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
++++++|| +|+++.|+|.++...++. .|.+++.++.+++. |.+|++.|++.+++.. .+++++++++||||||
T Consensus 131 ~~l~~~gd----~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~--~~~~~v~i~~p~nptG 203 (430)
T 2x5f_A 131 DLFVNQDD----TILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYN--KDKVIMILNYPNNPTG 203 (430)
T ss_dssp HHHCCTTC----EEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCC--SSEEEEEECSSCTTTC
T ss_pred HHHhCCCC----EEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcC--CCCEEEEEcCCCCCCC
Confidence 99999888 999999999999999999 99999999987643 7899999999997621 1578999999999999
Q ss_pred CCCCHHHHHHHHHHHHH-----CCcEEEEcccCCcccccCCCccccHH-HHHHHhCCCCCCce---eEEEEecccccCCC
Q psy13922 173 QVLTKENIQDIIKFAHR-----EKLFLFADEVYQDNVYAEGSKFYSFK-KVLVEMGEPYKSME---LASFMSCSKGYMGE 243 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~-----~~i~lI~Deay~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---vi~i~S~SK~~~G~ 243 (509)
.+++.+++++|+++|++ +|+++|+||+|.++.+++. .+.++. ++.. . ..+ +++++|+||.+ |+
T Consensus 204 ~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~-~-----~~~~~~~i~~~s~sK~~-~~ 275 (430)
T 2x5f_A 204 YTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV-YTQSLFTALTN-L-----HSNAILPIRLDGATKEF-FA 275 (430)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSS-CCSCHHHHHHT-T-----CCTTEEEEEEEEHHHHT-TC
T ss_pred CcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcc-cchHHHHHHhh-c-----cCCcceEEEEEecccCC-CC
Confidence 99999999999999999 9999999999999988643 344554 4421 1 234 78899999999 78
Q ss_pred CCCeeEEEeeecCCHHHHHHHHHhhh-----cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhc
Q psy13922 244 CGLRGGYSEVINLDPGVKAMLHKSIS-----AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDC 318 (509)
Q Consensus 244 ~Glr~G~v~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 318 (509)
+|+|+||+++.+.++++++.+..... .+.+++.+ .+.++..
T Consensus 276 ~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~ 321 (430)
T 2x5f_A 276 WGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLP----------------------------------TQSAVKH 321 (430)
T ss_dssp GGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHH----------------------------------HHHHHHH
T ss_pred CCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChH----------------------------------HHHHHHH
Confidence 99999999821128999998876553 24456666 4444444
Q ss_pred ccC-CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCC
Q psy13922 319 VVN-PPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFN----SIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCP 393 (509)
Q Consensus 319 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 393 (509)
+++ . ..+.++++++++.++++++.+.+.|+ ++ ++.+.++++++|+|++++ +. +
T Consensus 322 ~l~~~--------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~~~~~g~~~~~~~~------------~~-~ 379 (430)
T 2x5f_A 322 VLKNN--------KQFDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAYDFNSGYFMAIKVH------------DV-D 379 (430)
T ss_dssp HHHSC--------HHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEECCCCBSSEEEEEES------------SS-C
T ss_pred HHccC--------hHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CceeeCCCceEEEEeCCC------------CC-C
Confidence 332 1 12444567799999999999999998 55 788888999999998775 11 2
Q ss_pred cHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCC
Q psy13922 394 SVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQV 473 (509)
Q Consensus 394 ~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (509)
..++...+++++||.+.|| . .+
T Consensus 380 ~~~~~~~l~~~~gi~v~~g----~------------------------------------------------~~------ 401 (430)
T 2x5f_A 380 PEALRKHLIDKYSIGVIAL----N------------------------------------------------AT------ 401 (430)
T ss_dssp HHHHHHHHHHHHCEECEEC----S------------------------------------------------SS------
T ss_pred HHHHHHHHHHhCCEEEecC----C------------------------------------------------CC------
Confidence 4455556666589999986 1 33
Q ss_pred CCceeEEEEee-cChHHHHHHHHHHHHHHHHH
Q psy13922 474 PGTYHFRTTIL-PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 474 ~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~ 504 (509)
++|++++ .+++++++++++|+++++++
T Consensus 402 ----~iRis~~~~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 402 ----DIRIAFSCVEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp ----EEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred ----eEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 8999999 99999999999999998764
No 49
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=4.4e-39 Score=332.10 Aligned_cols=313 Identities=17% Similarity=0.190 Sum_probs=244.0
Q ss_pred CHHHHHHHHH-HHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC--cEEEeCCHHHHHHHHHH--HhhcCCC
Q psy13922 27 PDDVKQRAQA-VLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ--DVILSAGASDGIKSVLK--LLIEDVD 101 (509)
Q Consensus 27 p~~v~~a~~~-~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~--~i~~t~G~~~al~~~~~--~l~~~gd 101 (509)
++.+++++.+ ++.. ....+|++..|..++|+++++++...++..++++ +|++|+|+++++..+++ .+.++||
T Consensus 46 ~~~v~~a~~~~~~~~---~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd 122 (397)
T 3fsl_A 46 LQAVAEAEARLNAQP---HGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPES 122 (397)
T ss_dssp CHHHHHHHHHHHHSC---CCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHhhccCc---cccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCC
Confidence 4799999998 8876 3445599989999999999999976655444788 99999999999999954 5578888
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
+|+++.|+|.++...++..|.+++.++..++.++.+|++.|++.+++. .++++++++++||||||.+++.++++
T Consensus 123 ----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~~v~~~~p~nptG~~~~~~~l~ 196 (397)
T 3fsl_A 123 ----GVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL--QAGSIVLLHPCCHNPTGADLTNDQWD 196 (397)
T ss_dssp ----CEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC--CTTCEEEECSSSCTTTCCCCCHHHHH
T ss_pred ----eEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC--CCCCEEEEeCCCCCCCCcCCCHHHHH
Confidence 999999999999999999999999999854446789999999999842 11578888899999999999999999
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|+++|+++|+++|+||+|.++.++++....++..+. +. ..++++++|+||.+ |++|+|+||+++...+++++
T Consensus 197 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~-----~~~~i~~~S~SK~~-~~~G~riG~~~~~~~~~~~~ 269 (397)
T 3fsl_A 197 AVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIA-SA-----GLPALVSNSFSKIF-SLYGERVGGLSVMCEDAEAA 269 (397)
T ss_dssp HHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHH-HT-----TCCEEEEEECTTTT-TCGGGCCEEEEEECSSHHHH
T ss_pred HHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHH-hc-----CCCEEEEecccccc-cCcCCCeeEEEEecCCHHHH
Confidence 9999999999999999999999886433344555443 21 23489999999999 79999999997434577766
Q ss_pred HHHHHh-----hhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch-HHHHH
Q psy13922 262 AMLHKS-----ISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY-EQFSR 335 (509)
Q Consensus 262 ~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~-~~~~~ 335 (509)
+.+... ...+.+++.+ ++.++..++. ++.+ ..+.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~l~-----~~~l~~~~~~ 310 (397)
T 3fsl_A 270 GRVLGQLKATVRRNYSSPPNF----------------------------------GAQVVAAVLN-----DEALKASWLK 310 (397)
T ss_dssp HHHHHHHHHHHHTTTSSCCSH----------------------------------HHHHHHHHHT-----SHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCHH----------------------------------HHHHHHHHhc-----CHHHHHHHHH
Confidence 654322 1234455655 4444444433 1111 12356
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC---CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIE---GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
+++++++.++++++.+.+.|++++ ++.+..+++++|+|++++ .+ .+..+++++||.+.|
T Consensus 311 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~-~~~~~l~~~gi~v~~ 372 (397)
T 3fsl_A 311 EVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS----------------AA-QVDRLREEFGVYLIA 372 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC----------------HH-HHHHHHHTTCEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC----------------HH-HHHHHHHhCCEEECC
Confidence 688999999999999999999874 688888899999996553 22 257788899999974
No 50
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.4e-38 Score=328.65 Aligned_cols=342 Identities=24% Similarity=0.314 Sum_probs=273.4
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+++++ +.+.. . ...|++..|..++|+++++++...+|+++++++|++|+|+++++..+++++.++||
T Consensus 57 ~~~~v~~a~-~~l~~---~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd---- 127 (409)
T 2gb3_A 57 TPEVFFERI-YENKP---E-VVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGD---- 127 (409)
T ss_dssp CCTHHHHHH-HHTCC---S-SCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTC----
T ss_pred CCHHHHHHH-HHHhc---C-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCC----
Confidence 367899999 87765 2 33598888899999999999998888888889999999999999999999998888
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.|+++.|+|.++...++..|.+++.++.+++.+|.+ ++.|++.+++ ++++|++++|+||||.++|.+++++|++
T Consensus 128 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~-----~~~~v~~~~p~nptG~~~~~~~l~~i~~ 201 (409)
T 2gb3_A 128 EILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINE-----RTKGIVLSNPCNPTGVVYGKDEMRYLVE 201 (409)
T ss_dssp EEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCT-----TEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCc-----CCeEEEECCCCCCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999999876445666 8888888765 7899999999999999999999999999
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH-HHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP-GVKAML 264 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~-~~~~~l 264 (509)
+|+++|+++|+||+|.++.+++ .+.++ + .+. ..++++++|+||.+ |++|+|+||++ .++ ++++.+
T Consensus 202 ~~~~~~~~li~Dea~~~~~~~~--~~~~~--~-~~~-----~~~~i~~~s~sK~~-g~~G~r~G~~~---~~~~~l~~~l 267 (409)
T 2gb3_A 202 IAERHGLFLIVDEVYSEIVFRG--EFASA--L-SIE-----SDKVVVIDSVSKKF-SACGARVGCLI---TRNEELISHA 267 (409)
T ss_dssp HHHHTTCEEEEECTTTTCBCSS--CCCCG--G-GSC-----CTTEEEEEESTTTT-TCGGGCCEEEE---CSCHHHHHHH
T ss_pred HHHHcCCEEEEECcccccccCC--CCCCc--c-ccC-----CCCEEEEecchhcc-CCccceEEEEE---ECcHHHHHHH
Confidence 9999999999999999988764 23333 1 111 12378889999999 79999999998 565 899988
Q ss_pred HHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHH
Q psy13922 265 HKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSL 344 (509)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (509)
......+.+++.+ .+.++..+++. ...+++++++.+
T Consensus 268 ~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~----------~~~~~~~~~~~~ 303 (409)
T 2gb3_A 268 MKLAQGRLAPPLL----------------------------------EQIGSVGLLNL----------DDSFFDFVRETY 303 (409)
T ss_dssp HHHHHHSCCCCHH----------------------------------HHHHHHHHHTC----------CHHHHHHHHHHH
T ss_pred HHHHhccCCCCHH----------------------------------HHHHHHHHHhc----------cHHHHHHHHHHH
Confidence 8765532255555 44444444431 123477888899
Q ss_pred HHHHHHHHHHHhcCCCCee-ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhh-----cCeEEecCCCCCCC
Q psy13922 345 KQRAKMVADTFNSIEGMSC-NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLER-----TGICIVPGAGFGQV 418 (509)
Q Consensus 345 ~~~~~~l~~~L~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~-----~gI~v~pg~~f~~~ 418 (509)
+++++.+.+.|+++ |+.+ ..+.+++++|++++ +. +...+...++++ +||.+.||..|+..
T Consensus 304 ~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~------------~~-~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~ 369 (409)
T 2gb3_A 304 RERVETVLKKLEEH-GLKRFTKPSGAFYITAELP------------VE-DAEEFARWMLTDFNMDGETTMVAPLRGFYLT 369 (409)
T ss_dssp HHHHHHHHHHHHHT-TCCCBCCCSBSSEEEEECS------------SS-CHHHHHHHHHHSCCBTTEEEECEEGGGGCSS
T ss_pred HHHHHHHHHHHHHc-CceeeeCCCeeEEEEEEeC------------CC-CHHHHHHHHHhccccccCcEEEeCchHhCCC
Confidence 99999999999998 8888 77888999997764 11 244555566666 59999999877651
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFR 498 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~ 498 (509)
++ .+.+ ++|++++.++++|++++++|+
T Consensus 370 ~~---------------------------------------------~~~~--------~iRis~~~~~e~i~~~~~~l~ 396 (409)
T 2gb3_A 370 PG---------------------------------------------LGKK--------EIRIACVLEKDLLSRAIDVLM 396 (409)
T ss_dssp TT---------------------------------------------TTSS--------EEEEECCSCHHHHHHHHHHHH
T ss_pred CC---------------------------------------------CCCC--------EEEEEeCCCHHHHHHHHHHHH
Confidence 00 1222 999999999999999999999
Q ss_pred HHHHHHHhh
Q psy13922 499 EFHEEFLAK 507 (509)
Q Consensus 499 ~~~~~~~~~ 507 (509)
++++++++.
T Consensus 397 ~~l~~~~~~ 405 (409)
T 2gb3_A 397 EGLKMFCSS 405 (409)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHhhhc
Confidence 999887654
No 51
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.7e-38 Score=326.31 Aligned_cols=351 Identities=19% Similarity=0.292 Sum_probs=273.3
Q ss_pred HHHHHHHhhcCCCCC----CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEE
Q psy13922 7 LSLQVLALVSLPQLF----DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI 80 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~----~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~ 80 (509)
.++.+......++.+ +.|.+ |+.+.+++.+++.. .+.|++..|..++|+++++++. +++++|+
T Consensus 14 ~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----~~~y~~~~~~~~l~~~la~~~~------~~~~~v~ 82 (381)
T 1v2d_A 14 IFPRMSGLAQRLGAVNLGQGFPSNPPPPFLLEAVRRALGR-----QDQYAPPAGLPALREALAEEFA------VEPESVV 82 (381)
T ss_dssp CHHHHHHHHHHHTCEECCCCSCSSCCCHHHHHHHHHHTTT-----SCSCCCTTCCHHHHHHHHHHHT------SCGGGEE
T ss_pred HHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHHH-----hcCCCCCCCCHHHHHHHHHhcC------CChhhEE
Confidence 345555544333332 44444 68899999888865 2358888888999999999973 5678899
Q ss_pred EeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC--CCCCCCCCHHHHHHHHHhhhccCC
Q psy13922 81 LSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD--ESKQWGLPISELERSITEARKHCN 158 (509)
Q Consensus 81 ~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~d~~~L~~~i~~~~~~~~ 158 (509)
+|+|+++++..+++++.++|| .|+++.|+|.++...++..|.+++.++.+ ++ ++.+|++.|++.+++ +
T Consensus 83 ~~~g~~~a~~~~~~~~~~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~-----~ 152 (381)
T 1v2d_A 83 VTSGATEALYVLLQSLVGPGD----EVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTP-----R 152 (381)
T ss_dssp EESSHHHHHHHHHHHHCCTTC----EEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHHHHHTTCCT-----T
T ss_pred EcCChHHHHHHHHHHhCCCCC----EEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHHHHHHhcCc-----C
Confidence 999999999999999988888 99999999999999999999999999986 33 368899999998865 7
Q ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 159 PRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
+++|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+ +. ...++..+ . ..+++++.|+||
T Consensus 153 ~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~-~~~~~~~~--~------~~~~~~~~s~sK 222 (381)
T 1v2d_A 153 TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GE-RPRRLREF--A------PERTFTVGSAGK 222 (381)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SS-CCCCHHHH--C------TTTEEEEEEHHH
T ss_pred CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CC-CCCCHHHh--c------CCCEEEEeechh
Confidence 99999999999999999999999999999999999999999999887 32 34455544 1 123788899999
Q ss_pred ccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhh
Q psy13922 239 GYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMD 317 (509)
Q Consensus 239 ~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 317 (509)
.+ |++|+|+||++ .++++++.+..... ..++++.+ .+.++.
T Consensus 223 ~~-~~~G~r~G~~~---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~ 264 (381)
T 1v2d_A 223 RL-EATGYRVGWIV---GPKEFMPRLAGMRQWTSFSAPTP----------------------------------LQAGVA 264 (381)
T ss_dssp HT-TCGGGCCEEEE---CCTTTHHHHHHHHHHHTSSCCHH----------------------------------HHHHHH
T ss_pred hc-CCcccceEEEE---eCHHHHHHHHHHHhhcccCCCcH----------------------------------HHHHHH
Confidence 99 78999999998 68888888876554 23455555 343333
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHH
Q psy13922 318 CVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (509)
.+++ ...+.++++++++.++++++++.+.|++. |+++..+.+++++|++++ . . +
T Consensus 265 ~~l~--------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--~----------~--~--- 318 (381)
T 1v2d_A 265 EALK--------LARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYVPEGTYFLMAELP--G----------W--D--- 318 (381)
T ss_dssp HHHH--------HHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEECCSBSSEEEEECT--T----------C--C---
T ss_pred HHHh--------CcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecCCCcceEEEEecC--h----------H--h---
Confidence 3322 01113347888899999999999999986 888888888999997765 1 1 1
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
+..+++++||.+.||..|.... .+.+
T Consensus 319 ~~~~l~~~gi~v~~g~~~~~~~----------------------------------------------~~~~-------- 344 (381)
T 1v2d_A 319 AFRLVEEARVALIPASAFYLED----------------------------------------------PPKD-------- 344 (381)
T ss_dssp HHHHHHHTCEECEEGGGGCSSS----------------------------------------------CCTT--------
T ss_pred HHHHHHhCCEEEecchHhCCCC----------------------------------------------CCCC--------
Confidence 5678889999999998876510 1122
Q ss_pred eEEEEeecChHHHHHHHHHHHHHHHHHHh
Q psy13922 478 HFRTTILPQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 478 ~~Rls~~~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
++|++++.++++|++++++|++++++.++
T Consensus 345 ~iRi~~~~~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 345 LFRFAFCKTEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHC-----
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHhhccc
Confidence 89999999999999999999999877654
No 52
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=3e-38 Score=329.74 Aligned_cols=368 Identities=15% Similarity=0.151 Sum_probs=275.9
Q ss_pred HHHHHHHHhhcCCCCC----CCCCC-----CHHHHHHH--HHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCC
Q psy13922 6 SLSLQVLALVSLPQLF----DDPRF-----PDDVKQRA--QAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPA 74 (509)
Q Consensus 6 ~~~~~~~~~~~~~~~~----~~~~~-----p~~v~~a~--~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~ 74 (509)
+.++++..+...+..+ |.|+. ++.+.+++ .+++... .....+|++..|.+++|+++++++ ++
T Consensus 21 ~~~~~~~~~~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~~------~~ 93 (427)
T 3ppl_A 21 DIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAAD-GTDVRNYGGLDGIVDIRQIWADLL------GV 93 (427)
T ss_dssp HHHHHHHHHHHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTT-SCBTTSSCCSSCCHHHHHHHHHHH------TS
T ss_pred HHHHHHHHhhcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhcc-chhhcCCCCCCCcHHHHHHHHHHh------CC
Confidence 3555555555555543 55543 12455555 4444432 233556999999999999999999 26
Q ss_pred CCCcEEEeCCHHHHH--HHHHHHhhc--C----------CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCC
Q psy13922 75 DWQDVILSAGASDGI--KSVLKLLIE--D----------VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWG 140 (509)
Q Consensus 75 ~~~~i~~t~G~~~al--~~~~~~l~~--~----------gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 140 (509)
++++|++|+|+++++ +.+++++++ + || +|+++.|+|..+...++..|++++.+|.+++ +
T Consensus 94 ~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd----~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g 166 (427)
T 3ppl_A 94 PVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETV----KWICPVPGYDRHFSITERFGFEMISVPMNED---G 166 (427)
T ss_dssp CGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCC----EEEEEESCCHHHHHHHHHTTCEEEEEEEETT---E
T ss_pred CcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCC----EEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---C
Confidence 788999999999999 588888887 6 66 9999999999999999999999999999865 5
Q ss_pred CCHHHHHHHHHhhhccCCceEEEEe-CCCCCCCCCCCHHHHHHHHHHH-HHCCcEEEEcccCCcccccCCC-ccccHHHH
Q psy13922 141 LPISELERSITEARKHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFA-HREKLFLFADEVYQDNVYAEGS-KFYSFKKV 217 (509)
Q Consensus 141 ~d~~~L~~~i~~~~~~~~~~~ivi~-~p~NPtG~~~s~~~l~~l~~ia-~~~~i~lI~Deay~~~~~~~~~-~~~~~~~~ 217 (509)
+|++.|+++++.. ++++|+++ +||||||.+++.+++++|+++| +++|++||+||+|.++.+.+.. ...++.++
T Consensus 167 ~d~~~l~~~l~~~----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 242 (427)
T 3ppl_A 167 PDMDAVEELVKNP----QVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGL 242 (427)
T ss_dssp ECHHHHHHHTTST----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHH
T ss_pred CCHHHHHHHHhcC----CCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhh
Confidence 8999999998532 78998865 8999999999999999999999 9999999999999998776532 23455555
Q ss_pred HHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHH
Q psy13922 218 LVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVK 296 (509)
Q Consensus 218 ~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (509)
....+. ..++++++||||.. ++|+|+||++ .++++++.+..... ...+++.+
T Consensus 243 ~~~~~~---~~~~i~~~S~SK~~--~~G~r~G~~~---~~~~l~~~~~~~~~~~~~~~~~~------------------- 295 (427)
T 3ppl_A 243 GEAAGN---PNRFWAFTSTSKIT--LAGAGVSFFL---TSAENRKWYTGHAGIRGIGPNKV------------------- 295 (427)
T ss_dssp HHHTTC---TTSEEEEEESTTTS--CTTSSCEEEE---CCHHHHHHHHHHHHHHCSCCCHH-------------------
T ss_pred hhccCC---CCcEEEEechhhcc--CcCccEEEEE---cCHHHHHHHHHHhhcccCCCCHH-------------------
Confidence 321111 23489999999995 4999999998 79999999987765 34566666
Q ss_pred HHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCeeccCCceeEE
Q psy13922 297 QRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS----IEGMSCNPVQGAMYA 372 (509)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~~g~~~ 372 (509)
.|.++..+++ + ...+.+++++.++.++++++.+.+.|.+ ++++.+..|++++|+
T Consensus 296 ---------------~q~~~~~~l~-----~--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~ 353 (427)
T 3ppl_A 296 ---------------NQLAHARYFG-----D--AEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFI 353 (427)
T ss_dssp ---------------HHHHHHHHHC-----S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCE
T ss_pred ---------------HHHHHHHHHh-----C--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEE
Confidence 5555555444 1 1234455778888888888888777755 335777888999999
Q ss_pred eecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec-CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchh
Q psy13922 373 FPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP-GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVL 451 (509)
Q Consensus 373 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p-g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (509)
|++++- . +... +.+.|.++||.++| |..|.....
T Consensus 354 ~~~~~~------------~-~~~~-~~~~l~~~gv~v~~~g~~~~~~~~------------------------------- 388 (427)
T 3ppl_A 354 SLDVVP------------G-TASR-VAELAKEAGIALTGAGSSYPLRQD------------------------------- 388 (427)
T ss_dssp EEECST------------T-CHHH-HHHHHHHTTEECCCTTTTSGGGCC-------------------------------
T ss_pred EEECCc------------c-hHHH-HHHHHHHCCCEEecCcCcCCCCCC-------------------------------
Confidence 987751 1 2344 45677888999999 444442000
Q ss_pred hhhhhhhcccccccCCCCCCCCCCceeEEEEeec-ChHHHHHHHHHHHHHHHHHHhh
Q psy13922 452 YAFESLERTGICIVPGAGFGQVPGTYHFRTTILP-QPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~-~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
.+.+ ++|||++. ++++|++++++|++++++...+
T Consensus 389 --------------~~~~--------~~Ris~~~~~~~~i~~~~~~l~~~l~~~~~~ 423 (427)
T 3ppl_A 389 --------------PENK--------NLRLAPSLPPVEELEVAMDGVATCVLLAAAE 423 (427)
T ss_dssp --------------TTSC--------EEEECCSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------CCCC--------eEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1222 99999995 8999999999999999877543
No 53
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.8e-38 Score=329.62 Aligned_cols=368 Identities=18% Similarity=0.229 Sum_probs=257.2
Q ss_pred hhcCCCCC----CCCCCCHH----HHHHHHHHHhccc-CCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCC
Q psy13922 14 LVSLPQLF----DDPRFPDD----VKQRAQAVLDGCR-GQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAG 84 (509)
Q Consensus 14 ~~~~~~~~----~~~~~p~~----v~~a~~~~l~~~~-~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G 84 (509)
....++++ |.|..++. +.+++.+.+.+.. ......|++..|.+++|+++++++.+++|+++++++|++|+|
T Consensus 27 ~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G 106 (417)
T 3g7q_A 27 GLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNG 106 (417)
T ss_dssp -----CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESC
T ss_pred hccCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCC
Confidence 33445554 67777554 4444444444310 012235999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCC-CCCCeEEEc-CCCChhHHHHHHhc------CCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 85 ASDGIKSVLKLLIEDVD-GKKPGVLIP-IPQYPLYSASLAEF------NMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 85 ~~~al~~~~~~l~~~gd-~~~~~Vlv~-~p~y~~~~~~~~~~------g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
+++++++++++++++|| +.++.|+++ .|+|.++...+... +..+..++.+. .+|.+|++.|+ +.+
T Consensus 107 ~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~--~~~---- 179 (417)
T 3g7q_A 107 SQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ-FKYHVDFEHLH--IGE---- 179 (417)
T ss_dssp HHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE-EEEECCGGGCC--CCT----
T ss_pred cHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc-cccccCHHHhc--ccc----
Confidence 99999999999998864 223378887 99999988765322 34444444321 24578999987 444
Q ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec
Q psy13922 157 CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC 236 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 236 (509)
++++|++++||||||.+++.+++++|+++|++||+++|+||+|..+.... .+.+. .++ ...++++++|+
T Consensus 180 -~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~--~~~~~---~~~-----~~~~~i~~~s~ 248 (417)
T 3g7q_A 180 -ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI--IFSEA---RPL-----WNPNIILCMSL 248 (417)
T ss_dssp -TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC--BCSCC---CCC-----CCTTEEEEEES
T ss_pred -CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc--ccccc---ccC-----CCCCEEEEEec
Confidence 79999999999999999999999999999999999999999998643211 11110 011 12348889999
Q ss_pred ccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccch
Q psy13922 237 SKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTV 315 (509)
Q Consensus 237 SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 315 (509)
|| + |++|+|+||++ .++++++.+..... ...+++.+ .+.+
T Consensus 249 sK-~-~~~G~r~G~~~---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~ 289 (417)
T 3g7q_A 249 SK-L-GLPGSRCGIII---ANDKTITAIANMNGIISLAPGGM----------------------------------GPAM 289 (417)
T ss_dssp GG-G-TCTTSCCEEEE---CCHHHHHHHHHHHHHHCCCCCSH----------------------------------HHHH
T ss_pred hh-c-cCCCcceEEEE---eCHHHHHHHHHhhcceeeCCCcH----------------------------------HHHH
Confidence 99 6 67999999998 79999999987765 33455666 4444
Q ss_pred hhcccCCCCCCCCchHHHHHHHHH-HHHHHHHHHHHHHHHHhc-CC--CCeeccCCceeEEeecCCCCHHHHHHHhhcCC
Q psy13922 316 MDCVVNPPQPGEPSYEQFSREKQS-VLDSLKQRAKMVADTFNS-IE--GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGK 391 (509)
Q Consensus 316 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~-~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 391 (509)
+..+++ +..+. ++..+ +++.++++++.+.+.|.+ ++ ++.+..+.+++++|++++.. ++
T Consensus 290 ~~~~l~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~----------~~ 351 (417)
T 3g7q_A 290 MCEMIK-----RNDLL---RLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDL----------PI 351 (417)
T ss_dssp HHHHHH-----TTCHH---HHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTC----------SS
T ss_pred HHHHHc-----CcchH---HHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCC----------CC
Confidence 444433 11222 22344 777888888888888876 55 47778889999999877520 11
Q ss_pred CCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCC
Q psy13922 392 CPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFG 471 (509)
Q Consensus 392 ~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (509)
+...+ ...|.++||.++||..|+.. ....+
T Consensus 352 -~~~~l-~~~l~~~gi~v~~g~~f~~~-----------------------------------------------~~~~~- 381 (417)
T 3g7q_A 352 -TTELL-YQRLKARGVLMVPGHYFFPG-----------------------------------------------LDKPW- 381 (417)
T ss_dssp -CHHHH-HHHHHHTTEECEEGGGGCTT-----------------------------------------------BSSCC-
T ss_pred -CHHHH-HHHHHHCCEEEECchhhCCC-----------------------------------------------Ccccc-
Confidence 23444 45557889999999988762 00000
Q ss_pred CCCCceeEEEEeecChHHHHHHHHHHHHHHHHHHhh
Q psy13922 472 QVPGTYHFRTTILPQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 472 ~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
..+..++|||++.++++|++++++|++++++++++
T Consensus 382 -~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~~~~~ 416 (417)
T 3g7q_A 382 -PHTHQCMRMNYVPEPDKIEAGVKILAEEIERAWRE 416 (417)
T ss_dssp -GGGGGEEEEESCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ccCCCeEEEEecCCHHHHHHHHHHHHHHHHHHHhc
Confidence 00123999999999999999999999999887653
No 54
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=2.9e-38 Score=329.21 Aligned_cols=372 Identities=15% Similarity=0.186 Sum_probs=276.3
Q ss_pred HHHHHHHHhhcCCCCC----CCCC-----CCHHHHHHHH--HHHhcccCCCcccC-CCCcchHHHHHHHHHHHhhhcCCC
Q psy13922 6 SLSLQVLALVSLPQLF----DDPR-----FPDDVKQRAQ--AVLDGCRGQSVGSY-TDSPGIEIIRRHVAQYISRRDGQP 73 (509)
Q Consensus 6 ~~~~~~~~~~~~~~~~----~~~~-----~p~~v~~a~~--~~l~~~~~~~~~~Y-~~~~g~~~lr~~va~~l~~~~g~~ 73 (509)
+.++++..+...+..+ |.|+ .|+.+.+++. +.+.. +....+| ++..|.+++|+++++++.
T Consensus 13 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~Yp~~~~g~~~lr~~ia~~~~------ 84 (423)
T 3ez1_A 13 LARQAYEAFKARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMD--GLDLRNYPGGVAGLPSARALFAGYLD------ 84 (423)
T ss_dssp HHHHHHHHHHHHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEET--TEETTSSCSCTTCCHHHHHHHHHHTT------
T ss_pred HHHHHHHHhhcCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhc--chhhhCCCCCCCChHHHHHHHHHHhC------
Confidence 4566666766655554 6777 3557888775 44442 2334669 888999999999999982
Q ss_pred CCCCcEEEeCCHHHHHH--HHHHHhhc--CCCC-----CCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHH
Q psy13922 74 ADWQDVILSAGASDGIK--SVLKLLIE--DVDG-----KKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPIS 144 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~--~~~~~l~~--~gd~-----~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 144 (509)
+++++|++|+|+++++. .++++++. +|+. .+++|+++.|+|.++...++..|.+++.++.+++ ++|++
T Consensus 85 ~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~ 161 (423)
T 3ez1_A 85 VKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVD 161 (423)
T ss_dssp SCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHH
T ss_pred CChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHH
Confidence 67889999999999998 89999887 7310 0129999999999999999999999999999865 58999
Q ss_pred HHHHHHH-hhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHH-HHCCcEEEEcccCCcccccC-C-CccccHHHHHH
Q psy13922 145 ELERSIT-EARKHCNPRAIVI-INPGNPTGQVLTKENIQDIIKFA-HREKLFLFADEVYQDNVYAE-G-SKFYSFKKVLV 219 (509)
Q Consensus 145 ~L~~~i~-~~~~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia-~~~~i~lI~Deay~~~~~~~-~-~~~~~~~~~~~ 219 (509)
.|+++++ .. ++++|++ ++||||||.+++.+++++|+++| +++|++||+||+|..+.+.+ + ....++.++..
T Consensus 162 ~l~~~l~~~~----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 237 (423)
T 3ez1_A 162 AVERLAGTDP----SVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLAR 237 (423)
T ss_dssp HHHHHHHSCT----TEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHH
T ss_pred HHHHHHhhCC----CceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhh
Confidence 9999996 22 7899976 59999999999999999999999 99999999999999766654 2 23446665532
Q ss_pred HhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHH
Q psy13922 220 EMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQR 298 (509)
Q Consensus 220 ~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (509)
..+. ..++++++||||.. ++|+|+||++ .++++++.+..... ...+++.+
T Consensus 238 ~~~~---~~~~i~~~S~sK~~--~~G~r~G~~~---~~~~~~~~~~~~~~~~~~~~~~~--------------------- 288 (423)
T 3ez1_A 238 DAGY---PDRAFVFASTSKIT--FAGAGLGFVA---SSEDNIRWLSKYLGAQSIGPNKV--------------------- 288 (423)
T ss_dssp HHTC---TTSEEEEEESTTTS--CSSSSCEEEE---ECHHHHHHHHHHHHHSCSCCCHH---------------------
T ss_pred ccCC---CCeEEEEeCchhhc--cCCcceEEEE---eCHHHHHHHHHHHhhhccCCCHH---------------------
Confidence 2111 23489999999985 4899999998 79999999988765 44566666
Q ss_pred HHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc----CC-CCeeccCCceeEEe
Q psy13922 299 AQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS----IE-GMSCNPVQGAMYAF 373 (509)
Q Consensus 299 ~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-g~~~~~~~~g~~~~ 373 (509)
.|.++..+++ + ....+.+++++.++.++++++.+.+.|.+ ++ ++.+..+.+++|+|
T Consensus 289 -------------~~~a~~~~l~-----~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~ 349 (423)
T 3ez1_A 289 -------------EQARHVKFLT-----E-YPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFIS 349 (423)
T ss_dssp -------------HHHHHHHHHH-----H-STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEE
T ss_pred -------------HHHHHHHHHH-----h-ccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEE
Confidence 3444333332 0 00223344677777777777776666654 43 36777889999999
Q ss_pred ecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec-CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhh
Q psy13922 374 PQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP-GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLY 452 (509)
Q Consensus 374 ~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p-g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (509)
++++- . +...+...+.++||.++| |..|+....
T Consensus 350 ~~~~~------------~--~~~~~~~~l~~~gv~v~~~g~~~~~~~~-------------------------------- 383 (423)
T 3ez1_A 350 LDTAE------------P--VADRVVKLAEAAGVSLTPAGATYPAGQD-------------------------------- 383 (423)
T ss_dssp EEESS------------S--CHHHHHHHHHHTTEECCCTTTTSSTTCC--------------------------------
T ss_pred EECCC------------C--cHHHHHHHHHHCCcEEecCcccccCCCC--------------------------------
Confidence 87751 1 223356778889999999 666653100
Q ss_pred hhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHHHHhh
Q psy13922 453 AFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
.+ ..++||+++ .++++|++++++|++++++...+
T Consensus 384 -------------~~--------~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~~ 418 (423)
T 3ez1_A 384 -------------PH--------NRNLRLAPTRPPVEEVRTAMQVVAACIRLATEE 418 (423)
T ss_dssp -------------SS--------SCEEEECCSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------CC--------CCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 12 229999999 59999999999999999876543
No 55
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=3.9e-38 Score=328.62 Aligned_cols=355 Identities=15% Similarity=0.171 Sum_probs=265.2
Q ss_pred CCCC---C--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHH--HHHHH
Q psy13922 22 DDPR---F--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGI--KSVLK 94 (509)
Q Consensus 22 ~~~~---~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al--~~~~~ 94 (509)
|.|+ | |+.+++++.+.+.........+|++..|.+++|+++++++. +++++|++|+|+++++ ..+++
T Consensus 40 g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~------~~~~~i~~t~G~~~al~l~~~~~ 113 (422)
T 3d6k_A 40 GKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALG------LPADLVVAQDGSSLNIMFDLISW 113 (422)
T ss_dssp CSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHT------CCGGGEEECSSCHHHHHHHHHHH
T ss_pred CCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhC------CChhHEEEecchHHHHHHHHHHH
Confidence 5664 4 44666665443211112235569999999999999999992 6788999999999997 77888
Q ss_pred HhhcC---C-------CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEE-
Q psy13922 95 LLIED---V-------DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIV- 163 (509)
Q Consensus 95 ~l~~~---g-------d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~iv- 163 (509)
.+..+ | | +++|+++.|+|.++...++..|++++.+|.+++ ++|++.|++.+++. ++++|+
T Consensus 114 ~l~~~~~~g~~~~~~~d--~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~----~~~~v~~ 184 (422)
T 3d6k_A 114 SYTWGNNDSSRPWSAEE--KVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDP----QVKGMWT 184 (422)
T ss_dssp HHHHCCTTCSSCGGGSS--CCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTST----TEEEEEE
T ss_pred HhcCcccccccccccCC--CCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcC----CCeEEEE
Confidence 88765 2 2 237999999999999999999999999999765 48999999998753 689988
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHH-HCCcEEEEcccCCcccccC-CCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 164 IINPGNPTGQVLTKENIQDIIKFAH-REKLFLFADEVYQDNVYAE-GSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 164 i~~p~NPtG~~~s~~~l~~l~~ia~-~~~i~lI~Deay~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
+++||||||.+++.+++++|+++|+ ++|++||+||+|.++.+.. +..+.++.++....+. ..++++++||||..
T Consensus 185 ~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~S~SK~~- 260 (422)
T 3d6k_A 185 VPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGN---PNRFWFMSSTSKIT- 260 (422)
T ss_dssp CCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTC---TTCEEEEEESTTTS-
T ss_pred cCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCC---CCcEEEEcChhhhc-
Confidence 5899999999999999999999999 9999999999998633322 2234455444221111 23589999999984
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhccc
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVV 320 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 320 (509)
++|+|+||++ +++++++.+..... ...+++.+ +|.++..++
T Consensus 261 -~~GlriG~~~---~~~~l~~~l~~~~~~~~~~~~~~----------------------------------~q~a~~~~l 302 (422)
T 3d6k_A 261 -HAGSGVSFFA---SSKENIEWYASHANVRGIGPNKL----------------------------------NQLAHAQFF 302 (422)
T ss_dssp -CTTSSCEEEE---CCHHHHHHHHHHHHHHCSCCCHH----------------------------------HHHHHHHHH
T ss_pred -CcccceEEEE---eCHHHHHHHHHHHHhhcCCCCHH----------------------------------HHHHHHHHH
Confidence 4999999998 78999999987665 34566777 555555555
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHH
Q psy13922 321 NPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS----IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVL 396 (509)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (509)
+ + ...+.++++++++.++++++.+.+.|.+ ++++.+..|++++|+|++++. + +.+.
T Consensus 303 ~-----~--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~-----------~--~~~~ 362 (422)
T 3d6k_A 303 G-----D--VAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVP-----------G--TASR 362 (422)
T ss_dssp C-----S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEEST-----------T--CHHH
T ss_pred h-----C--cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCC-----------C--CHHH
Confidence 4 1 1224455788888888888888887765 333677788899999987751 1 2333
Q ss_pred HHHHHHhhcCeEEec-CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCC
Q psy13922 397 YAFELLERTGICIVP-GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPG 475 (509)
Q Consensus 397 ~~~~ll~~~gI~v~p-g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (509)
+..++.++||.++| |..|..... .+.+
T Consensus 363 -~~~~l~~~gV~v~~~g~~f~~~~~---------------------------------------------~~~~------ 390 (422)
T 3d6k_A 363 -VVELAKEAGIALTGAGSSFPLHND---------------------------------------------PNNE------ 390 (422)
T ss_dssp -HHHHHHHTTEECCCTTTTSGGGCC---------------------------------------------TTSC------
T ss_pred -HHHHHHHCCeEEEcCccccCCCCC---------------------------------------------CCCC------
Confidence 56788899999999 455542000 1122
Q ss_pred ceeEEEEee-cChHHHHHHHHHHHHHHHHHHhh
Q psy13922 476 TYHFRTTIL-PQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 476 ~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
++|||++ .+++++++++++|+++++++.++
T Consensus 391 --~iRis~~~~~~e~i~~~~~~l~~~l~~~~~~ 421 (422)
T 3d6k_A 391 --NIRLAPSLPPVAELEVAMDGFATCVLMAALE 421 (422)
T ss_dssp --EEEECCSSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --eEEEecCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999 79999999999999999887654
No 56
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.2e-38 Score=342.61 Aligned_cols=374 Identities=19% Similarity=0.278 Sum_probs=263.4
Q ss_pred CCCCCC-HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHH-hhhcCCCC---CCCcEEEeCCHHHHHHHHHHH-
Q psy13922 22 DDPRFP-DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYI-SRRDGQPA---DWQDVILSAGASDGIKSVLKL- 95 (509)
Q Consensus 22 ~~~~~p-~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l-~~~~g~~~---~~~~i~~t~G~~~al~~~~~~- 95 (509)
|.|.+| +.+++++.+.+.. .+|+++.|..++|+++++++ .++++... ++++|++|+|+++++..++++
T Consensus 112 g~~~~~~~~~~~al~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l 185 (546)
T 2zy4_A 112 DQLGLDPAAFLHEMVDGILG------CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESL 185 (546)
T ss_dssp HTSCCCHHHHHHHHHHHHHT------CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHhhhc------CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHh
Confidence 456665 4566666555421 35999999899999987655 55444322 468999999999999999988
Q ss_pred ----hhcCCCCCCCeEEEcCCCChhHHHHHHh--cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 96 ----LIEDVDGKKPGVLIPIPQYPLYSASLAE--FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 96 ----l~~~gd~~~~~Vlv~~p~y~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
++++|| .|+++.|+|.+|...+.. .|.+++.++.+++++|.+|++.|++.+.. ++++|++++|||
T Consensus 186 ~~~~l~~~Gd----~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----~~k~v~l~~p~N 256 (546)
T 2zy4_A 186 KLNGLLKAGD----KVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP-----AIKIFFCVNPSN 256 (546)
T ss_dssp HHTTSSCTTC----EEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST-----TEEEEEEESSCS
T ss_pred hhhhcCCCCC----EEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC-----CCeEEEEECCCC
Confidence 467888 999999999999988654 47999999998877889999999887654 799999999999
Q ss_pred CCCCCCCHHHHHHHHHHH--HHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe
Q psy13922 170 PTGQVLTKENIQDIIKFA--HREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR 247 (509)
Q Consensus 170 PtG~~~s~~~l~~l~~ia--~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr 247 (509)
|||.+++.+++++|+++| +++|++||+||+|.+|.++ +.++.+..+ .++|+++||||.+ |++|+|
T Consensus 257 PtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~----~~s~~~~~~--------~~~i~~~S~SK~~-g~~GlR 323 (546)
T 2zy4_A 257 PPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD----FQSLFAICP--------ENTLLVYSFSKYF-GATGWR 323 (546)
T ss_dssp SSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT----CCCHHHHCG--------GGEEEEEESTTTT-TCGGGC
T ss_pred CCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc----CcCHHHhCC--------CCEEEEEeCcccc-CCCCcc
Confidence 999999999999999999 7899999999999998753 345554421 2489999999999 799999
Q ss_pred eEEEeeecCCH-HHHHHHHHhh------------hccc-CcchhhhhccccccCCCCCchhHHHHHHHh--hhcccCccc
Q psy13922 248 GGYSEVINLDP-GVKAMLHKSI------------SAML-CPTVLALVSLPQLFDDPRFPDDVKQRAQAV--LDGCRGQSV 311 (509)
Q Consensus 248 ~G~v~~~~~~~-~~~~~l~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 311 (509)
+||++ +++ ++++.+.+.. ..+. .+... +|.+.++..+.+. .........
T Consensus 324 iG~~~---~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~------------~~~~~~~~~~~~~~~~~~~~~s~~ 388 (546)
T 2zy4_A 324 LGVVA---AHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSL------------KFIDRLVADSRAVALNHTAGLSTP 388 (546)
T ss_dssp EEEEE---EESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGC------------CHHHHHHHHTTTTTTGGGCSSCHH
T ss_pred eEEEE---ECCHHHHHHHHhhcchhhhHHHHHHhhhccccccch------------hhhhhhhhhhHHHHhhccCCCCcH
Confidence 99998 455 4777763211 0000 00000 0000000000000 000000011
Q ss_pred ccchh-----hcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCC------CH
Q psy13922 312 GQTVM-----DCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKL------PA 380 (509)
Q Consensus 312 ~~~al-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~------~~ 380 (509)
.|.++ ..+++. ...+.+++++.++++++.+.+.|. + ++.+.+++++||+|++++. ..
T Consensus 389 ~Q~a~a~~a~~all~~----------~~~~~~~~r~~~~~r~~~l~~~L~-~-~~~~~~~~~~~~l~~~l~~~~~~~~~~ 456 (546)
T 2zy4_A 389 QQVQMALFSLFALMDE----------ADEYKHTLKQLIRRRETTLYRELG-M-PPLRDENAVDYYTLIDLQDVTAKLYGE 456 (546)
T ss_dssp HHHHHHHHHHHHHHCT----------TCHHHHHHHHHHHHHHHHHHGGGT-S-SCCCCTTBCCSEEEEEHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHhc----------cHHHHHHHHHHHHHHHHHHHHhcC-C-CcccCCCCeeEEEEEEHHHhhcccccH
Confidence 33322 222221 123367888899999999999886 5 5666688999999987641 00
Q ss_pred HHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcc
Q psy13922 381 KAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERT 460 (509)
Q Consensus 381 ~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (509)
++..+.. .+. ++.+++.++++++||.++||..|+..
T Consensus 457 ~~~~wl~-~~~-~~~~~l~~ll~~~gV~v~pG~~F~~~------------------------------------------ 492 (546)
T 2zy4_A 457 AFSEWAV-KQS-STGDMLFRIADETGIVLLPGRGFGSN------------------------------------------ 492 (546)
T ss_dssp HHHHHHH-HHC-CHHHHHHHHHHHHSCCCEESSCTTCS------------------------------------------
T ss_pred HHHHHhh-ccC-CHHHHHHHHHHHCCEEEeCccccCCC------------------------------------------
Confidence 1111111 122 24455678899999999999998761
Q ss_pred cccccCCCCCCCCCCceeEEEEeec-ChHHHHHHHHHHHHHHHHHHhhcC
Q psy13922 461 GICIVPGAGFGQVPGTYHFRTTILP-QPEKLKAMLEKFREFHEEFLAKYK 509 (509)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~Rls~~~-~~~~i~~~~~~l~~~~~~~~~~~~ 509 (509)
. + +|||+++. +++++++++++|+++++++.++|+
T Consensus 493 -----~--~--------~iRis~~~~~~e~i~~~~~~l~~~l~~~~~~~~ 527 (546)
T 2zy4_A 493 -----R--P--------SGRASLANLNEYEYAAIGRALRKMADELYAEYS 527 (546)
T ss_dssp -----S--C--------EEEEESSSSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -----C--C--------eEEEEeccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2 89999995 899999999999999999999886
No 57
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=7.6e-39 Score=343.70 Aligned_cols=380 Identities=18% Similarity=0.237 Sum_probs=267.9
Q ss_pred CCCCC-CHHHHHHHHHHHhcccCCCcccCC-CCcchHHHHHHHHHHHhhh-cC-CCCC-CCcEEEeCCHHHHHHHHHHH-
Q psy13922 22 DDPRF-PDDVKQRAQAVLDGCRGQSVGSYT-DSPGIEIIRRHVAQYISRR-DG-QPAD-WQDVILSAGASDGIKSVLKL- 95 (509)
Q Consensus 22 ~~~~~-p~~v~~a~~~~l~~~~~~~~~~Y~-~~~g~~~lr~~va~~l~~~-~g-~~~~-~~~i~~t~G~~~al~~~~~~- 95 (509)
|.|.+ |+.+++++.+.+.. . . |+ +..|.+++|+++++++..+ .+ +.+. +++|++|+|+++++..++++
T Consensus 111 g~~~~~~~~~v~a~~~~~~~---~--~-y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l 184 (533)
T 3f6t_A 111 TELGLNRDKVVAEWVNGAVA---N--N-YPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSL 184 (533)
T ss_dssp HTTCCCHHHHHHHHHHHHHT---C--S-CCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHH
T ss_pred CCCCcCCcHHHHHHHHHHHh---C--C-CCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHh
Confidence 34444 45666666666554 1 2 54 7789999999999999766 23 4554 46999999999999999998
Q ss_pred ----hhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCC--CCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 96 ----LIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDE--SKQWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 96 ----l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
++++|| +|+++.|+|.++...++..|++++.++.+. +.+|.+|++.|++.++. ++++|++++|||
T Consensus 185 ~~~~l~~~gd----~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-----~~k~v~l~~p~N 255 (533)
T 3f6t_A 185 AENHLLKKGD----KIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-----SIKALIVVNPTN 255 (533)
T ss_dssp HHTTSSCTTC----EEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT-----TEEEEEEESSCT
T ss_pred hhhhccCCcC----EEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC-----CCeEEEEeCCCC
Confidence 678888 999999999999999999999999999865 55789999999998876 799999999999
Q ss_pred CCCCCCCHHHHHHHHHHHH-HCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 170 PTGQVLTKENIQDIIKFAH-REKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 170 PtG~~~s~~~l~~l~~ia~-~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
|||.+++.+++++|+++|+ +||++||+||+|.++.++ ..++..... .++++++||||.+ |++|+|+
T Consensus 256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~----~~~~~~~~~--------~~~i~~~S~SK~~-g~~G~Ri 322 (533)
T 3f6t_A 256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPN----FKSIYSVVP--------YNTMLVYSYSKLF-GCTGWRL 322 (533)
T ss_dssp TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTT----CCCHHHHSG--------GGEEEEEESHHHH-TCGGGCE
T ss_pred CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccC----ccCHhhcCC--------CCEEEEecCcccC-CCcccce
Confidence 9999999999999999999 689999999999998764 344444322 2489999999999 8999999
Q ss_pred EEEeeecCCHHHHHHHHH-------------hhhcccCcchhhhhccccccCCCCCchhHHHHHHH--hhhcccCccccc
Q psy13922 249 GYSEVINLDPGVKAMLHK-------------SISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQA--VLDGCRGQSVGQ 313 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 313 (509)
||++. .++.+++.+.. +.+....+... +|.+.++..... ...........|
T Consensus 323 G~l~~--~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~------------~~i~rl~~~~~~~~~~~~~~~~~~~q 388 (533)
T 3f6t_A 323 GVIAL--NEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKM------------KFIDRLCADSRSIGLYHTAGLSTPQQ 388 (533)
T ss_dssp EEEEE--ESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGC------------CHHHHHHHHHTTTTTGGGCSCCHHHH
T ss_pred EEEEE--CcHHHHHHHHHhcchhhHHHHHhhhhccccCcchh------------hhHHHHHHHHHHHHHhcccCCChHHH
Confidence 99983 33333333311 11001111110 000000000000 000000001133
Q ss_pred ch-----hhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCH------HH
Q psy13922 314 TV-----MDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPA------KA 382 (509)
Q Consensus 314 ~a-----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~------~~ 382 (509)
.+ +..+.+. -|+ +.+.++++++++.++++++.+.+.|. + ++.+..+++++|+|+++.... .+
T Consensus 389 ~a~a~~a~~~L~~~--~g~---~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~~~~~g~~~~~~l~~~~~~~~g~~~ 461 (533)
T 3f6t_A 389 IMEALFSMTHLLTS--TNG---GSDDPYIDIARKLVSERYDQLHDAMQ-A-PKDETDTNTHYYSLIDIYRLAEKIYGKEF 461 (533)
T ss_dssp HHHHHHHHHHHTTC--BGG---GTBCHHHHHHHHHHHHHHHHHHHHHT-C-CCCCSTTBCCSEEEEEHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHhhh--ccc---cchHHHHHHHHHHHHHHHHHHHHhcC-C-CccccCCCceEEEEEehHhhhhhccchHH
Confidence 33 2222100 000 11234478899999999999999998 6 678888999999998774100 00
Q ss_pred HHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccc
Q psy13922 383 IAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGI 462 (509)
Q Consensus 383 ~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (509)
..... .+ .++.+++.++++++||++.||..|+.
T Consensus 462 ~~~~~-~~-~~~~~~~~~ll~~~GV~v~pg~~f~~--------------------------------------------- 494 (533)
T 3f6t_A 462 RDYLT-NN-FEQVDFLLKLAEKNGVVLVDGVGFGA--------------------------------------------- 494 (533)
T ss_dssp HHHHH-HH-CCHHHHHHHHHHHTTSSSCTTEEECS---------------------------------------------
T ss_pred HHHhh-cc-CCHHHHHHHHHHhCCEEEeCCcccCC---------------------------------------------
Confidence 00000 01 13456678888899999999998876
Q ss_pred cccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHHHHhhcC
Q psy13922 463 CIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEEFLAKYK 509 (509)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~~~~~~~ 509 (509)
+ .+ ++|+|++ .+++++++++++|+++++++.++||
T Consensus 495 ---~-~~--------~iRls~a~~~~e~i~~~i~~L~~~l~~~~~~~~ 530 (533)
T 3f6t_A 495 ---K-PG--------ELRVSQANLPTEDYALIGKQVLELLKEYYEEFK 530 (533)
T ss_dssp ---S-TT--------EEEEESSSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---C-CC--------EEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22 8999999 6999999999999999999999986
No 58
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=3e-38 Score=327.01 Aligned_cols=337 Identities=18% Similarity=0.238 Sum_probs=253.0
Q ss_pred CCHHHHHHHHHHHhcccC-CCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRG-QSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~-~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~ 104 (509)
.|+.+++++.++++.... .....|++..|..++|+++++++. +|. +++++|++|+|+++++..++. +..+||
T Consensus 47 ~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~-~~~~gd--- 119 (400)
T 3asa_A 47 LNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLS-FFGPNQ--- 119 (400)
T ss_dssp CCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHH-HHCSSC---
T ss_pred CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCC-CCHHHEEEccChHHHHHHHHH-HcCCCC---
Confidence 478899999988876321 124459888899999999999974 354 678899999999999998765 456777
Q ss_pred CeEEEcCCCChhHHHHHHhcCCE-EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNME-QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~-~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
+|+++.|+|.++...++..|.+ ++.++.++++++..|++.+ . ++++|++++||||||.++|.+++++|
T Consensus 120 -~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~-----~-----~~~~v~l~~p~nptG~~~~~~~l~~l 188 (400)
T 3asa_A 120 -TVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPED-----T-----HIDILCLCSPNNPTGTVLNKDQLRAI 188 (400)
T ss_dssp -EEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTT-----C-----CCSEEEEESSCTTTCCCCCHHHHHHH
T ss_pred -EEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhc-----c-----CccEEEEeCCCCCCCCcCCHHHHHHH
Confidence 9999999999999999999998 9999987655566664321 2 78999999999999999999999999
Q ss_pred HHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHH---
Q psy13922 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGV--- 260 (509)
Q Consensus 184 ~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~--- 260 (509)
+++|+++|+++|+||+|.++.+++. ...++..+... ..++++++|+||.+ |++|+|+||++ .++++
T Consensus 189 ~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~------~~~~i~~~s~sK~~-g~~GlriG~~~---~~~~~~~~ 257 (400)
T 3asa_A 189 VHYAIEHEILILFDAAYSTFISDPS-LPKSIFEIPDA------RFCAIEINSFSKPL-GFAGIRLGWTV---IPQELTYA 257 (400)
T ss_dssp HHHHHHTTCEEEEECTTGGGCCCTT-SCSSGGGSTTG------GGTEEEEEECCGGG-TTTTCCCEEEE---CCTTCBCT
T ss_pred HHHHHHcCCEEEEEchhhhhhcCCC-CCCchhhCCCC------CCceEEEecchhhc-CCcchheeEEe---eChhhccc
Confidence 9999999999999999999877542 12233222100 12378899999999 79999999998 67666
Q ss_pred ----HHHHHHh-hh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHH
Q psy13922 261 ----KAMLHKS-IS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFS 334 (509)
Q Consensus 261 ----~~~l~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 334 (509)
++.+... .. .+.+++.+ .|.++..+++ + .
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~---------~-~- 292 (400)
T 3asa_A 258 DGHFVIQDWERFLSTTFNGASIP----------------------------------AQEAGVAGLS---------I-L- 292 (400)
T ss_dssp TSCBHHHHHHHHHHHHCCCCCHH----------------------------------HHHHHHHHHH---------H-T-
T ss_pred hhhhHHHHHHHHhccCccCCChH----------------------------------HHHHHHHHhC---------c-H-
Confidence 5555332 22 33456666 4444444432 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeec-CCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 335 REKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQ-MKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 335 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
+++++++.++++++.+.+.|+++ |+++..+.+++|+|++ ++ . +. ++..+...+++++||.+.||.
T Consensus 293 -~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--~---------~~-~~~~~~~~l~~~~gv~v~~g~ 358 (400)
T 3asa_A 293 -PQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLWVKPTQ--A---------NI-SDRDLFDFFLREYHIAITPGI 358 (400)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEEEECCC--T---------TC-CTTTHHHHHHHHHSEECEEGG
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEEEeccC--C---------CC-CHHHHHHHHHHhCCEEEeChh
Confidence 35677888899999999999988 8888888888999987 53 1 22 233445677778899999998
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHH
Q psy13922 414 GFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAM 493 (509)
Q Consensus 414 ~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~ 493 (509)
.|+. .+.+ ++||++..++++++++
T Consensus 359 ~f~~------------------------------------------------~~~~--------~iRis~~~~~e~i~~~ 382 (400)
T 3asa_A 359 GFGR------------------------------------------------SGSG--------FVRFSSLGKREDILAA 382 (400)
T ss_dssp GGCG------------------------------------------------GGTT--------CEEEECCSCHHHHHHH
T ss_pred HhCC------------------------------------------------CCCC--------EEEEEeeCCHHHHHHH
Confidence 8765 2323 8999988999999999
Q ss_pred HHHHHHHHHHHHh
Q psy13922 494 LEKFREFHEEFLA 506 (509)
Q Consensus 494 ~~~l~~~~~~~~~ 506 (509)
+++|+++++++..
T Consensus 383 l~~l~~~~~~~~~ 395 (400)
T 3asa_A 383 CERLQMAPALQSH 395 (400)
T ss_dssp HHHHHC-------
T ss_pred HHHHHHHHHhhhh
Confidence 9999999987654
No 59
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=6.4e-37 Score=311.05 Aligned_cols=326 Identities=18% Similarity=0.283 Sum_probs=260.2
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.+.+ |+.+++++.+.+.. ...|+ ..+..++|++++++++ +++++|++|+|+++++..+++.+.++
T Consensus 24 ~~~~~~~~~~v~~a~~~~~~~-----~~~y~-~~~~~~l~~~la~~~~------~~~~~i~~~~g~~~a~~~~~~~l~~~ 91 (354)
T 3ly1_A 24 NENPLGMSPKAQAAARDAVVK-----ANRYA-KNEILMLGNKLAAHHQ------VEAPSILLTAGSSEGIRAAIEAYASL 91 (354)
T ss_dssp CCCSSCCCHHHHHHHHHTGGG-----TTSCC-HHHHHHHHHHHHHHTT------SCGGGEEEESHHHHHHHHHHHHHCCT
T ss_pred CCCCCCCCHHHHHHHHHHHhh-----CcCCC-CCchHHHHHHHHHHhC------CChHHEEEeCChHHHHHHHHHHHhCC
Confidence 44544 68899999888875 34474 4678999999999983 56789999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|.++...++..|.+++.++.+++ +.+|++.|++.+++. +++++|++++|+||||.+++.++
T Consensus 92 gd----~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~l~~~---~~~~~v~l~~p~nptG~~~~~~~ 162 (354)
T 3ly1_A 92 EA----QLVIPELTYGDGEHFAKIAGMKVTKVKMLDN--WAFDIEGLKAAVAAY---SGPSIVYLVNPNNPTGTITPADV 162 (354)
T ss_dssp TC----EEEEESSSCTHHHHHHHHTTCEEEEECCCTT--SCCCHHHHHHHHHTC---SSCEEEEEESSCTTTCCCCCHHH
T ss_pred CC----eEEECCCCchHHHHHHHHcCCEEEEecCCCC--CCCCHHHHHHHhccC---CCCCEEEEeCCCCCcCCCcCHHH
Confidence 88 9999999999999999999999999998753 689999999999830 17999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+.+|+++| ++|+++|+||+|.++.+++ ...+........ ..++++++|+||.+ |++|+|+||++ .+++
T Consensus 163 l~~l~~~~-~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~-----~~~~i~~~s~sK~~-g~~G~r~G~~~---~~~~ 230 (354)
T 3ly1_A 163 IEPWIASK-PANTMFIVDEAYAEFVNDP--RFRSISPMITQG-----AENIILLKTFSKIH-AMAGMRVGYAV---AHPT 230 (354)
T ss_dssp HHHHHHTC-CTTEEEEEECTTGGGCCCT--TCCCSHHHHHTT-----CSSEEEEEESSSTT-CCGGGCCEEEE---CCHH
T ss_pred HHHHHHhC-CCCeEEEEeccHHHhcccc--ccCCHHHHhhhc-----CCCEEEEeeChhhc-cChhhhheeee---cCHH
Confidence 99999999 8999999999999988764 233444433321 13488899999999 79999999998 7999
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+...... ++++.+ .+.++..+++. . +++++
T Consensus 231 ~~~~~~~~~~~-~~~~~~----------------------------------~~~a~~~~l~~--------~---~~~~~ 264 (354)
T 3ly1_A 231 VIALMGRYVAG-EKINFS----------------------------------GVDAALASMND--------S---AFITY 264 (354)
T ss_dssp HHHHHGGGTTC-SCCCHH----------------------------------HHHHHHHHTTC--------H---HHHHH
T ss_pred HHHHHHHhcCC-CCCCHH----------------------------------HHHHHHHHhcC--------H---HHHHH
Confidence 99999876654 456666 55555555441 1 45788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
.++.++++++.+.+.|+++ ++.+.++.+ .|+|++++. +...+ ...|.++||.+. |.+++.
T Consensus 265 ~~~~~~~~~~~l~~~l~~~-~~~~~~~~~-~~~~~~~~~--------------~~~~~-~~~l~~~gi~v~-g~~~~~-- 324 (354)
T 3ly1_A 265 SKKSNDVSRQILLKALEDL-KLPYLPSEG-NFVFHQLVV--------------PLKDY-QTHMADAGVLIG-RAFPPA-- 324 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCBCCCCS-SEEEEECSS--------------CHHHH-HHHHHHTTEECC-CCCTTC--
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeECCCCc-eEEEEECCC--------------CHHHH-HHHHHHCCEEEe-ecCCCC--
Confidence 8999999999999999988 888776554 557877651 23443 455567899988 664433
Q ss_pred CccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHH
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFRE 499 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~ 499 (509)
++ ++|++++ +++++++++++|++
T Consensus 325 ----------------------------------------------~~----------~iRis~~-~~~~i~~~~~~l~~ 347 (354)
T 3ly1_A 325 ----------------------------------------------DN----------WCRISLG-TPQEMQWVADTMRE 347 (354)
T ss_dssp ----------------------------------------------TT----------EEEEECC-CHHHHHHHHHHHHH
T ss_pred ----------------------------------------------CC----------EEEEEcC-CHHHHHHHHHHHHH
Confidence 33 9999987 78999999999998
Q ss_pred HHHH
Q psy13922 500 FHEE 503 (509)
Q Consensus 500 ~~~~ 503 (509)
++++
T Consensus 348 ~l~~ 351 (354)
T 3ly1_A 348 FRKK 351 (354)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8763
No 60
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=2.2e-37 Score=321.46 Aligned_cols=346 Identities=16% Similarity=0.185 Sum_probs=251.6
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCc--EEEeCCHHHHHHHHHHHhh--
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQD--VILSAGASDGIKSVLKLLI-- 97 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~--i~~t~G~~~al~~~~~~l~-- 97 (509)
|.|+.++.|+++.+.++.. +....|.|..|+++||+++++++... ....+. .+.|.|+|.|+...+..+.
T Consensus 59 g~~~vl~~Vk~A~~~~~~~---~~~~~Y~p~~G~p~lr~aia~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~ 132 (420)
T 4h51_A 59 GRPYPLRVVRKAEQLLLDM---NLDYEYLPISGYQPFIDEAVKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRV 132 (420)
T ss_dssp SCBCCCHHHHHHHHHHHHT---TCCCCCCCTTCCHHHHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTT
T ss_pred CCCCCCHHHHHHHHHHhcC---CCCCCCCCcCChHHHHHHHHHHhcCC---CccccccceeeecCchHHHHHHHHHHHHh
Confidence 4667778999998887766 44445999999999999999998533 333343 4558899988887777664
Q ss_pred --cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEE-EEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 98 --EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQI-GYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 98 --~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~-~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
++|| +|++++|+|.+|...++.+|.+.+ .++..+..++.+|.+.+.+.+.... ++++++++++||||||..
T Consensus 133 ~~~pgd----~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~--~~~~vll~~~p~NPtG~~ 206 (420)
T 4h51_A 133 FDAETT----PIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAP--DGSVFILHQCAHNPTGVD 206 (420)
T ss_dssp SCTTTS----CEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSC--SSCEEEEESSSCTTTCCC
T ss_pred cCCCCC----EEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccC--CCcEEEEeCCCCCCCCCC
Confidence 4666 999999999999999999999744 4555445567889999998887632 256677778999999999
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
+++++|++|+++|+++++++|+|++|.+|.+++............+. ..+++++.||||.| |++|+|+||++++
T Consensus 207 ~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~s~SK~~-~~~G~RvG~~~~~ 280 (420)
T 4h51_A 207 PSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR-----GIEVLLAQSFSKNM-GLYSERAGTLSLL 280 (420)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT-----TCCCEEEEECTTTS-CCGGGCEEEEEEE
T ss_pred CCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh-----CceEEEEecccccc-ccccCceEEEEec
Confidence 99999999999999999999999999999886421111111122222 23489999999999 7999999999865
Q ss_pred cCCHHHHHHH----HHhh-hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCc
Q psy13922 255 NLDPGVKAML----HKSI-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPS 329 (509)
Q Consensus 255 ~~~~~~~~~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 329 (509)
....+-...+ .... ..+.+++.. ++.+....+++ ...
T Consensus 281 ~~~~~~~~~~~~~l~~~~r~~~s~~p~~----------------------------------~a~~~~~~l~d----~~l 322 (420)
T 4h51_A 281 LKDKTKRADVKSVMDSLIREEYTCPPAH----------------------------------GARLAHLILSN----NEL 322 (420)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTTSSCCHH----------------------------------HHHHHHHHHHS----HHH
T ss_pred ccCHHHHHHHHHHHHHhhhcccCcchHH----------------------------------HHHHHHHHhcC----HHH
Confidence 5554433333 2222 256677777 34333333331 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 330 YEQFSREKQSVLDSLKQRAKMVADTFNSI--EG-MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
...|.++++.+++.++++++.+.+.|+++ ++ +.++.+++|||.|..++ . +.+ ++|+++|
T Consensus 323 ~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls----------------~-e~v-~~L~e~~ 384 (420)
T 4h51_A 323 RKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS----------------K-AQC-EYCQNHN 384 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC----------------H-HHH-HHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC----------------H-HHH-HHHHhCC
Confidence 35567778999999999999999999986 22 55567889999995442 1 223 5678899
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-c
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-P 485 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~ 485 (509)
|+++| + -|||++ .
T Consensus 385 Vy~~~-------------------------------------------------------~-----------gRis~Agl 398 (420)
T 4h51_A 385 IFITV-------------------------------------------------------S-----------GRANMAGL 398 (420)
T ss_dssp EECCT-------------------------------------------------------T-----------CEEEGGGC
T ss_pred EEEcC-------------------------------------------------------C-----------CEEEeccC
Confidence 98874 2 289998 6
Q ss_pred ChHHHHHHHHHHHHHHHHHHhh
Q psy13922 486 QPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 486 ~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
+++.|+.+.++|.+++++..+|
T Consensus 399 ~~~ni~~~a~aI~~vvr~i~re 420 (420)
T 4h51_A 399 THETALMLAQTINDAVRNVNRE 420 (420)
T ss_dssp CHHHHHHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999887664
No 61
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=6e-37 Score=312.74 Aligned_cols=323 Identities=15% Similarity=0.165 Sum_probs=259.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.+.+ |+.+++++.+.+.. ..+|++..+ .++|++++++++ +++++|++|+|+++++..++++++++
T Consensus 38 ~~~~~~~~~~v~~a~~~~~~~-----~~~y~~~~~-~~lr~~la~~~~------~~~~~v~~~~g~~~a~~~~~~~l~~~ 105 (365)
T 3get_A 38 NENPFGTPPKAIECLRQNANK-----AHLYPDDSM-IELKSTLAQKYK------VQNENIIIGAGSDQVIEFAIHSKLNS 105 (365)
T ss_dssp CCCTTCSCHHHHHHHHHHGGG-----TTSCCCTTC-HHHHHHHHHHHT------CCGGGEEEESSHHHHHHHHHHHHCCT
T ss_pred CCCCCCCCHHHHHHHHHHHHh-----hccCCCCCh-HHHHHHHHHHhC------CCcceEEECCCHHHHHHHHHHHHhCC
Confidence 44554 68899999988874 345888777 899999999983 56789999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|.++...++..|++++.++. +..++ +|++.|++.++. ++++|++++|+||||.+++.++
T Consensus 106 gd----~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~-----~~~~v~~~~p~nptG~~~~~~~ 174 (365)
T 3get_A 106 KN----AFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKD-----EIKLIFLCLPNNPLGECLDASE 174 (365)
T ss_dssp TC----EEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTT-----TEEEEEEESSCTTTCCCCCHHH
T ss_pred CC----EEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCC-----CCCEEEEcCCCCCCCCCcCHHH
Confidence 98 9999999999999999999999999998 33457 899999999986 7999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccc--cCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVY--AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+.+|+++| ++|+++|+||+|.++.+ .+. .+.+....... ..++++++|+||.+ |++|+|+||++ .+
T Consensus 175 l~~l~~~~-~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~------~~~~i~~~s~sK~~-~~~G~r~G~~~---~~ 242 (365)
T 3get_A 175 ATEFIKGV-NEDCLVVIDAAYNEFASFKDSK-KHLEPCELIKE------FDNVLYLGTFSKLY-GLGGLRIGYGI---AN 242 (365)
T ss_dssp HHHHHHTS-CTTSEEEEECTTHHHHHHHCGG-GCCCHHHHHHH------CTTEEEEEESSSTT-SCTTTCCEEEE---EC
T ss_pred HHHHHHhC-CCCcEEEEeCccHHHhcccCCc-ccccHhHHhcc------CCCEEEEeecchHh-cCcchheEEEE---cC
Confidence 99999998 57999999999999885 332 33444443222 23488899999999 79999999998 69
Q ss_pred HHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 258 PGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 258 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
+++++.+...... ++++.+ .+.++..+++ ..+++
T Consensus 243 ~~~~~~~~~~~~~-~~~~~~----------------------------------~~~~~~~~l~-----------~~~~~ 276 (365)
T 3get_A 243 ANIISAFYKLRAP-FNVSNL----------------------------------ALKAAVAAMD-----------DDEFT 276 (365)
T ss_dssp HHHHHHHHHHSCT-TCSCHH----------------------------------HHHHHHHHHT-----------CHHHH
T ss_pred HHHHHHHHHhcCC-CCcCHH----------------------------------HHHHHHHHhC-----------CHHHH
Confidence 9999999876654 346666 5555555544 11457
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++.++.++++++.+.+.|+++ ++++.++.+++ +|++++. . +...+ ...|.++||.+.||..|+.
T Consensus 277 ~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~-~~~~~~~------------~-~~~~~-~~~l~~~gi~v~~g~~~~~ 340 (365)
T 3get_A 277 EKTLENNFSQMELYKEFAKKH-NIKIIDSYTNF-ITYFFDE------------K-NSTDL-SEKLLKKGIIIRNLKSYGL 340 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCEECCCSSSE-EEEECSS------------S-CHHHH-HHHHHTTTEECEECGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCEECCCCCeE-EEEECCC------------C-CHHHH-HHHHHHCCEEEEECccCCC
Confidence 888999999999999999998 88887776655 7877651 1 34444 4555567999999876541
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
+ ++|++++ ++++++++++.|
T Consensus 341 -------------------------------------------------~----------~iRis~~-~~~~i~~l~~~l 360 (365)
T 3get_A 341 -------------------------------------------------N----------AIRITIG-TSYENEKFFTEF 360 (365)
T ss_dssp -------------------------------------------------S----------EEEEECC-CHHHHHHHHHHH
T ss_pred -------------------------------------------------C----------EEEEEcC-CHHHHHHHHHHH
Confidence 1 8999988 788999999988
Q ss_pred HHHH
Q psy13922 498 REFH 501 (509)
Q Consensus 498 ~~~~ 501 (509)
++++
T Consensus 361 ~~~l 364 (365)
T 3get_A 361 DKIL 364 (365)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8775
No 62
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=6.6e-37 Score=312.19 Aligned_cols=321 Identities=19% Similarity=0.239 Sum_probs=253.7
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.+.+ |+.+++++.+.+.. ...|+ ..+..++|++++++++ +++++|++|+|+++++..+++++.++
T Consensus 40 ~~~~~~~~~~v~~a~~~~~~~-----~~~y~-~~~~~~lr~~la~~~~------~~~~~v~~~~g~t~a~~~~~~~~~~~ 107 (363)
T 3ffh_A 40 NENPLGTSKKVAAIQANSSVE-----TEIYP-DGWASSLRKEVADFYQ------LEEEELIFTAGVDELIELLTRVLLDT 107 (363)
T ss_dssp CSCTTCCCHHHHHHHHTCBSC-----CCBC-----CHHHHHHHHHHHT------CCGGGEEEESSHHHHHHHHHHHHCST
T ss_pred CCCCCCCCHHHHHHHHHHHHH-----hhcCC-CcchHHHHHHHHHHhC------CChhhEEEeCCHHHHHHHHHHHHccC
Confidence 54554 67888888775543 44474 4577999999999993 56789999999999999999999998
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|.++...++..|.+++.++.++ ++.+|++.+++.+++ ++++|++++|+||||.+++.++
T Consensus 108 gd----~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~-----~~~~v~~~~p~nptG~~~~~~~ 176 (363)
T 3ffh_A 108 TT----NTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDE-----KTTIVWICNPNNPTGNYIELAD 176 (363)
T ss_dssp TC----EEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCT-----TEEEEEEESSCTTTCCCCCHHH
T ss_pred CC----EEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhccc-----CCCEEEEeCCCCCcCCCcCHHH
Confidence 88 999999999999999999999999999885 368999999999976 7999999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+.+|+++|++ |+++|+||+|.+|.+ +. ..+....... ..++++++|+||.+ |++|+|+||++ .+++
T Consensus 177 l~~l~~~~~~-~~~li~De~~~~~~~-~~--~~~~~~~~~~------~~~~i~~~s~sK~~-g~~G~r~G~~~---~~~~ 242 (363)
T 3ffh_A 177 IQAFLDRVPS-DVLVVLDEAYIEYVT-PQ--PEKHEKLVRT------YKNLIITRTFSKIY-GLASARVGYGI---ADKE 242 (363)
T ss_dssp HHHHHTTSCT-TSEEEEECTTGGGCS-SC--CCCCGGGGGT------CTTEEEEEESSSTT-CCSSCCCEEEE---ECHH
T ss_pred HHHHHHhCCC-CcEEEEeCchHhhcC-cc--ccCHHHHhhc------CCCEEEEeechhhh-cCchhceeeee---cCHH
Confidence 9999988887 999999999999887 32 2222222111 23489999999999 79999999998 6999
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+..... .++++.+ .+.++..+++ ..+++++
T Consensus 243 ~~~~l~~~~~-~~~~~~~----------------------------------~~~~~~~~l~-----------~~~~~~~ 276 (363)
T 3ffh_A 243 IIRQLNIVRP-PFNTTSI----------------------------------GQKLAIEAIK-----------DQAFIGE 276 (363)
T ss_dssp HHHHHHHTCC-SCCCBHH----------------------------------HHHHHHHHHH-----------CHHHHHH
T ss_pred HHHHHHHhCC-CCCCCHH----------------------------------HHHHHHHHhc-----------CHHHHHH
Confidence 9999987665 3455665 4444444433 1145788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
.++.++++++.+.+.|++++++.+.++.+ .|+|++++. +...+ ...|.++||.+.||..|+.
T Consensus 277 ~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~~~~~~~~--------------~~~~~-~~~l~~~gi~v~~g~~~~~-- 338 (363)
T 3ffh_A 277 CRTSNANGIKQYEAFAKRFEKVKLYPANG-NFVLIDLGI--------------EAGTI-FSYLEKNGYITRSGAALGF-- 338 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEECCCCS-SEEEEECSS--------------CHHHH-HHHHHHTTEECEETTTTTC--
T ss_pred HHHHHHHHHHHHHHHHhhCCCceECCCCC-eEEEEECCC--------------CHHHH-HHHHHHCCeEEEeCccCCC--
Confidence 89999999999999999966888876665 457876651 23443 4455567999999988765
Q ss_pred CccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHH
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFRE 499 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~ 499 (509)
++ ++|++++ ++++++++++.|++
T Consensus 339 ----------------------------------------------~~----------~iRis~~-~~~~i~~~~~~l~~ 361 (363)
T 3ffh_A 339 ----------------------------------------------PT----------AVRITIG-KEEDNSAVIALLEK 361 (363)
T ss_dssp ----------------------------------------------TT----------EEEEECC-CHHHHHHHHHHHHH
T ss_pred ----------------------------------------------CC----------eEEEECC-CHHHHHHHHHHHHH
Confidence 34 8999988 88999999998887
Q ss_pred H
Q psy13922 500 F 500 (509)
Q Consensus 500 ~ 500 (509)
+
T Consensus 362 ~ 362 (363)
T 3ffh_A 362 L 362 (363)
T ss_dssp H
T ss_pred h
Confidence 5
No 63
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=6.6e-37 Score=321.02 Aligned_cols=366 Identities=18% Similarity=0.221 Sum_probs=265.9
Q ss_pred CCCCCCHHHHHHHHHHHhcccCC------------CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQ------------SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGI 89 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~------------~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al 89 (509)
+.|..++.+.+++.+++.+.... ....|++..|.+++|+++++++.+.+|+.+++++|++|+|+++++
T Consensus 40 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al 119 (444)
T 3if2_A 40 GNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAF 119 (444)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred CCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHH
Confidence 67888877777766666543212 124599999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCC------C----eEEEc-CCCChhHHHH------HHhcCCEEEEEecCCC-C--CCCCCHHHHHHH
Q psy13922 90 KSVLKLLIEDVDGKK------P----GVLIP-IPQYPLYSAS------LAEFNMEQIGYYLDES-K--QWGLPISELERS 149 (509)
Q Consensus 90 ~~~~~~l~~~gd~~~------~----~Vlv~-~p~y~~~~~~------~~~~g~~~~~v~~~~~-~--~~~~d~~~L~~~ 149 (509)
+.++++++++||..+ + .|+++ .|+|..+... +...|.+++.++.+++ + +|.+|++.|+++
T Consensus 120 ~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~ 199 (444)
T 3if2_A 120 FYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENL 199 (444)
T ss_dssp HHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTC
T ss_pred HHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHH
Confidence 999999988763000 1 47765 9999998763 4556888998887752 2 367999999988
Q ss_pred HHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCce
Q psy13922 150 ITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSME 229 (509)
Q Consensus 150 i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (509)
+.... +++++|++++||||||.+++.+++++|+++|++||++||+||+|+.+.... .+.+.. +. ...+
T Consensus 200 l~~~~--~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~--~~~~~~---~~-----~~~~ 267 (444)
T 3if2_A 200 PALKE--GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI--IYSDAH---LN-----WDNN 267 (444)
T ss_dssp HHHHT--TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC--BCSCCC---CC-----CCTT
T ss_pred HHhcC--CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc--cccccc---cc-----CCCC
Confidence 43210 178999999999999999999999999999999999999999998643211 111100 00 0234
Q ss_pred eEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccC
Q psy13922 230 LASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRG 308 (509)
Q Consensus 230 vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (509)
+++++|+||. +++|+|+||++ .++++++.+..... ...+++.+
T Consensus 268 ~i~~~S~sK~--~~~G~r~G~~~---~~~~l~~~~~~~~~~~~~~~~~~------------------------------- 311 (444)
T 3if2_A 268 TILCFSLSKI--GLPGMRTGIIV---ADAKVIEAVSAMNAVVNLAPTRF------------------------------- 311 (444)
T ss_dssp EEEEEESTTT--TCGGGCCEEEE---CCHHHHHHHHHHHHHHHSSCCCH-------------------------------
T ss_pred EEEEechhhc--cCCCCceEEEE---ECHHHHHHHHHHHHhccCCCChH-------------------------------
Confidence 8889999996 46999999998 79999999987665 33455555
Q ss_pred cccccchhhcccCCCCCCCCchHHHHHHHHH-HHHHHHHHHHHHHHHHhc-CCC--CeeccCCceeEEeecCCCCHHHHH
Q psy13922 309 QSVGQTVMDCVVNPPQPGEPSYEQFSREKQS-VLDSLKQRAKMVADTFNS-IEG--MSCNPVQGAMYAFPQMKLPAKAIA 384 (509)
Q Consensus 309 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~-~~g--~~~~~~~~g~~~~~~~~~~~~~~~ 384 (509)
.+.++..+++ + ..+.++.++ +++.++++++.+.+.|.+ +++ +.+..+.+++++|++++..
T Consensus 312 ---~~~a~~~~l~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~----- 375 (444)
T 3if2_A 312 ---GAAIATPLVA-----N---DRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDL----- 375 (444)
T ss_dssp ---HHHHHHHHHH-----T---SHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTC-----
T ss_pred ---HHHHHHHHHH-----c---CchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCC-----
Confidence 3444433333 1 122223444 677888888888888766 554 5667788999999877520
Q ss_pred HHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccc
Q psy13922 385 KAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICI 464 (509)
Q Consensus 385 ~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (509)
++ +...+ ...|.++||.+.||..|....
T Consensus 376 -----~~-~~~~l-~~~l~~~gi~v~~g~~~~~~~--------------------------------------------- 403 (444)
T 3if2_A 376 -----PI-STLDL-YERLKAKGTLIVPSEYFFPGV--------------------------------------------- 403 (444)
T ss_dssp -----SS-CHHHH-HHHHHHTTEECEEGGGSCTTC---------------------------------------------
T ss_pred -----CC-CHHHH-HHHHHHCCeEEecchhhcCCC---------------------------------------------
Confidence 11 23443 455678899999999886510
Q ss_pred cCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHHHHHh
Q psy13922 465 VPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 465 ~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
.+. ++..+..++||+++.++++|++++++|+++++++.+
T Consensus 404 -~~~--~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 404 -DVS--DYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp -CCT--TCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCc--ccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHc
Confidence 010 001122389999999999999999999999988765
No 64
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=6.7e-37 Score=321.93 Aligned_cols=339 Identities=13% Similarity=0.173 Sum_probs=256.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCC---CCCCcEEE--eCCHHHHHHH--HHHHhhcC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQP---ADWQDVIL--SAGASDGIKS--VLKLLIED 99 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~---~~~~~i~~--t~G~~~al~~--~~~~l~~~ 99 (509)
.+.+.+++.+..... ......|.+..|.+++|+++++++. |.. +++++|++ |+|+++++++ .+..++.+
T Consensus 69 ~~av~~a~~~~~~~~-~~~~~~Y~~~~G~~~lr~~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~ 144 (448)
T 3meb_A 69 LPAVKEAEAIISSDL-SKYNKEYPPVAGFPLFLEAAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMP 144 (448)
T ss_dssp CHHHHHHHHHHHHCT-TTTCCSCCCTTCCHHHHHHHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHhhcc-cCCCCCCCCCcchHHHHHHHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCC
Confidence 345555555444211 1234459999999999999999983 433 22689999 9999999988 45567788
Q ss_pred CCCCCCeEEEcCCCChhHHHHHH----hcCCEEEEEecCCCC-CCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLA----EFNMEQIGYYLDESK-QWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~-~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
|| +|+++.|+|.++...++ ..|++++.++..+.. +|.+|++.|++.+++.. .+++++++++||||||.+
T Consensus 145 gd----~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~--~~~~~v~~~~p~NPtG~~ 218 (448)
T 3meb_A 145 KA----EFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAP--EKSIFLFHACAHNPSGID 218 (448)
T ss_dssp TC----CEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSC--TTCEEEEESSSCTTTCCC
T ss_pred CC----EEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCC--CCcEEEEeCCCCCCCCcC
Confidence 88 99999999999999999 999999999984443 68999999999998521 146777889999999999
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCC-CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEG-SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
++.+++++|+++|+++|+++|+||+|.+|.+++. ....++..+. +. ..+++++.|+||.| |++|+|+||+.+
T Consensus 219 ~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~-----~~~~i~~~S~SK~~-g~~G~RiG~l~~ 291 (448)
T 3meb_A 219 FTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFV-DA-----GVEVLVAQSFSKNF-GLYGERIGCLHV 291 (448)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHH-HT-----TCCEEEEEECTTTS-CCGGGCCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHh-hc-----CCcEEEEecccccC-CCccccceeeee
Confidence 9999999999999999999999999999987531 0122333332 22 23489999999999 799999999832
Q ss_pred ec--------CCH----HHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhccc
Q psy13922 254 IN--------LDP----GVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVV 320 (509)
Q Consensus 254 ~~--------~~~----~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 320 (509)
+. .++ .+++.+..... .+.+++.+ ++.++..++
T Consensus 292 v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~~l 337 (448)
T 3meb_A 292 VHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIH----------------------------------GAYIVQVIV 337 (448)
T ss_dssp ECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHH----------------------------------HHHHHHHHH
T ss_pred eeccccccccCCHHHHHHHHHHHHHHHhcccCCccHH----------------------------------HHHHHHHHh
Confidence 23 245 66776665433 45567777 454444444
Q ss_pred CCCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC------CeeccCCceeEEeecCCCCHHHHHHHhhcCC
Q psy13922 321 NPPQPGEPS-YEQFSREKQSVLDSLKQRAKMVADTFNSI--EG------MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGK 391 (509)
Q Consensus 321 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~g------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 391 (509)
+ ++. ...|.++++++++.++++++.+.+.|+++ ++ +.+..+++++|+|+.++
T Consensus 338 ~-----~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------------- 398 (448)
T 3meb_A 338 H-----DKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT-------------- 398 (448)
T ss_dssp T-----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC--------------
T ss_pred c-----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC--------------
Confidence 4 111 13455668899999999999999999987 56 66778899999996553
Q ss_pred CCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCC
Q psy13922 392 CPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFG 471 (509)
Q Consensus 392 ~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (509)
.+++..+++++||++.||+
T Consensus 399 ---~~~~~~ll~~~gV~v~~G~---------------------------------------------------------- 417 (448)
T 3meb_A 399 ---PEHVDYLKEKWSIYLVKAG---------------------------------------------------------- 417 (448)
T ss_dssp ---HHHHHHHHHHHCEEECSGG----------------------------------------------------------
T ss_pred ---HHHHHHHHHhCCEEEeCCC----------------------------------------------------------
Confidence 2346778889999998532
Q ss_pred CCCCceeEEEEeec-ChHHHHHHHHHHHHHHHH
Q psy13922 472 QVPGTYHFRTTILP-QPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 472 ~~~~~~~~Rls~~~-~~~~i~~~~~~l~~~~~~ 503 (509)
.|||++. ++++|++++++|++++++
T Consensus 418 -------gRis~a~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 418 -------GRMSMCGLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp -------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred -------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 2888884 888899999999999873
No 65
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=2.6e-37 Score=320.73 Aligned_cols=362 Identities=16% Similarity=0.206 Sum_probs=271.1
Q ss_pred hHHHHHHHHhhc---CCCCC----CC-------CCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhc
Q psy13922 5 FSLSLQVLALVS---LPQLF----DD-------PRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRD 70 (509)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~----~~-------~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~ 70 (509)
.+.++.+++.+. .+..+ |. +..|+.+.+++.+.+.. .....+|++..|..++|+++++++...+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~~y~~~~g~~~lr~~la~~~~~~~ 91 (412)
T 1ajs_A 14 PVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN--SSLNHEYLPILGLAEFRTCASRLALGDD 91 (412)
T ss_dssp CCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTC--TTCCCCCCCTTCCHHHHHHHHHHHHCTT
T ss_pred CchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhC--hhhccCCCCCCCCHHHHHHHHHHHhcCC
Confidence 346677776653 22332 33 33468899999888743 1234559888999999999999997665
Q ss_pred CCCCCCCcEEE--eCCHHHHHHHHHH--HhhcCC-----CCCCCeEEEcCCCChhHHHHHHhcCCE-EEEEecCCCCCCC
Q psy13922 71 GQPADWQDVIL--SAGASDGIKSVLK--LLIEDV-----DGKKPGVLIPIPQYPLYSASLAEFNME-QIGYYLDESKQWG 140 (509)
Q Consensus 71 g~~~~~~~i~~--t~G~~~al~~~~~--~l~~~g-----d~~~~~Vlv~~p~y~~~~~~~~~~g~~-~~~v~~~~~~~~~ 140 (509)
|+.+++++|++ |+|+++++..+++ .++.+| | +|+++.|+|.++...++..|.+ ++.++.+++.+|.
T Consensus 92 ~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (412)
T 1ajs_A 92 SPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDT----PVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRG 167 (412)
T ss_dssp CHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCS----CEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTE
T ss_pred CCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCC----eEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCc
Confidence 65567889999 9999999999965 445677 7 9999999999999999999999 9999986444678
Q ss_pred CCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCC-CccccHHHHHH
Q psy13922 141 LPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEG-SKFYSFKKVLV 219 (509)
Q Consensus 141 ~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~-~~~~~~~~~~~ 219 (509)
+|++.|++.+++. .++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..+.++.++..
T Consensus 168 ~d~~~l~~~l~~~--~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 245 (412)
T 1ajs_A 168 LDLQGFLSDLENA--PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS 245 (412)
T ss_dssp ECHHHHHHHHHHS--CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred cCHHHHHHHHHhC--CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhc
Confidence 9999999999752 12467787899999999999999999999999999999999999999987530 02234444322
Q ss_pred HhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH----HHHHHHHhh-hcccCcchhhhhccccccCCCCCchh
Q psy13922 220 EMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG----VKAMLHKSI-SAMLCPTVLALVSLPQLFDDPRFPDD 294 (509)
Q Consensus 220 ~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~----~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (509)
. ..+++++.|+||.+ |++|+|+||+++...+++ +++.+.... ..+.+++.+
T Consensus 246 ~------~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 301 (412)
T 1ajs_A 246 E------GFELFCAQSFSKNF-GLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQ----------------- 301 (412)
T ss_dssp T------TCCEEEEEECTTTS-CCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSH-----------------
T ss_pred c------CCcEEEEEeccccc-CCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChH-----------------
Confidence 1 22489999999999 778999999982111777 455555433 234445666
Q ss_pred HHHHHHHhhhcccCcccccchhhcccCCCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeeccCCcee
Q psy13922 295 VKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPS-YEQFSREKQSVLDSLKQRAKMVADTFNSIE---GMSCNPVQGAM 370 (509)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~g~ 370 (509)
++.++..+++ +.. +..+.++++++++.++++++++.+.|++++ ++.+..+.+++
T Consensus 302 -----------------~~~a~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 359 (412)
T 1ajs_A 302 -----------------GARIVARTLS-----DPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGM 359 (412)
T ss_dssp -----------------HHHHHHHHHH-----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSS
T ss_pred -----------------HHHHHHHHHc-----CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCce
Confidence 4444444433 100 112345688999999999999999999873 37777889999
Q ss_pred EEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCch
Q psy13922 371 YAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSV 450 (509)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (509)
|+|++++ ..++..+++++||.+.|
T Consensus 360 ~~~~~~~-----------------~~~~~~~l~~~gv~v~~--------------------------------------- 383 (412)
T 1ajs_A 360 FSFTGLN-----------------PKQVEYLINQKHIYLLP--------------------------------------- 383 (412)
T ss_dssp EEECCCC-----------------HHHHHHHHHTTCEECCT---------------------------------------
T ss_pred EEEeCCC-----------------HHHHHHHHHhCCEEecC---------------------------------------
Confidence 9996543 22367788889999874
Q ss_pred hhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHHHHHHHHHHHHH
Q psy13922 451 LYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~~~~~l~~~~~~ 503 (509)
.+|++++ .+++++++++++|++++++
T Consensus 384 ---------------------------~~Ris~~~~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 384 ---------------------------SGRINMCGLTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp ---------------------------TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred ---------------------------CcEEEeeeCCHHHHHHHHHHHHHHHHh
Confidence 3588888 5899999999999998864
No 66
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=6e-41 Score=346.16 Aligned_cols=347 Identities=18% Similarity=0.250 Sum_probs=274.4
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ |+.+++++.+++.. . ...|++. ..++|+++++++.+.+|+++++++|++|+|+++++..+++++.++
T Consensus 39 ~~~~~~~~~~v~~a~~~~~~~---~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~ 112 (392)
T 3b1d_A 39 ADMDFEVMPEVKQAIHDYAEQ---L-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKE 112 (392)
Confidence 56655 56788888888765 2 3348765 689999999999988888888899999999999999999999988
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCC-CCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDE-SKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
|| +|+++.|+|.++...++..|.+++.++.++ +++|.+|++.|++.+++. ++++|++++|+||||.+++.+
T Consensus 113 gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~~~ 184 (392)
T 3b1d_A 113 GE----AVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVEN----DVKLYLLCNPHNPGGRVWERE 184 (392)
Confidence 88 999999999999999999999999999853 335779999999999742 688999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++++|+++|+++|+++|+||+|.++.+++. .+.++..+..+. ..++++++|+||.+ |++|+|+||++. .++
T Consensus 185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~-----~~~~i~~~s~sK~~-~~~G~r~G~~~~--~~~ 255 (392)
T 3b1d_A 185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGH-EHVSFNTVSPDF-----KDFALVLSSATKTF-NIAGTKNSYAII--ENP 255 (392)
Confidence 999999999999999999999999988642 333444432211 12488899999999 799999999972 345
Q ss_pred HHHHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 259 GVKAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 259 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
++++.+......+ .+++.+ ++.++..+++. ..++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~~----------~~~~ 291 (392)
T 3b1d_A 256 TLCAQFKHQQLVNNHHEVSSL----------------------------------GYIATETAYRY----------GKPW 291 (392)
Confidence 6888887765533 245555 45544444431 1234
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCC
Q psy13922 337 KQSVLDSLKQRAKMVADTFNS-IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGF 415 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f 415 (509)
++++++.++++++.+.+.|++ +|++.+.++.+++++|++++.. +. +...+...+++++||.+.||..|
T Consensus 292 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~----------~~-~~~~l~~~l~~~~gi~v~~g~~f 360 (392)
T 3b1d_A 292 LVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDY----------GL-TDDALFTLLHDQAKVILNRGSDY 360 (392)
Confidence 778888999999999999988 7889888999999999766411 11 23344455556889999999988
Q ss_pred CCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHH
Q psy13922 416 GQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLE 495 (509)
Q Consensus 416 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~ 495 (509)
+. .+.+ ++|++++.++++|+++++
T Consensus 361 ~~------------------------------------------------~~~~--------~iRi~~~~~~e~i~~~l~ 384 (392)
T 3b1d_A 361 GS------------------------------------------------EGEL--------HARLNIAAPKSLVEEICK 384 (392)
Confidence 64 2323 899999988999999999
Q ss_pred HHHHHHH
Q psy13922 496 KFREFHE 502 (509)
Q Consensus 496 ~l~~~~~ 502 (509)
+|+++++
T Consensus 385 ~l~~~l~ 391 (392)
T 3b1d_A 385 RIVCCLP 391 (392)
Confidence 9998875
No 67
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=2.5e-37 Score=321.07 Aligned_cols=343 Identities=16% Similarity=0.158 Sum_probs=259.6
Q ss_pred CCCHHHHHHHHH-HHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE--eCCHHHHHHHHHH--HhhcC
Q psy13922 25 RFPDDVKQRAQA-VLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL--SAGASDGIKSVLK--LLIED 99 (509)
Q Consensus 25 ~~p~~v~~a~~~-~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~--t~G~~~al~~~~~--~l~~~ 99 (509)
..|+.+.+++.+ .+.. ....+|++..|..++|+++++++...+|+.+++++|++ |+|+++++.++++ .+..+
T Consensus 47 ~~~~~v~~a~~~~~~~~---~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~ 123 (412)
T 1yaa_A 47 WVLPSVKAAEKLIHNDS---SYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFP 123 (412)
T ss_dssp CCCHHHHHHHHHHHTCT---TCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCT
T ss_pred CCcHHHHHHHHhhhcCc---ccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCC
Confidence 456889999988 7764 33445988899999999999999766666667899999 9999999999843 34467
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEE-EeCCCCCCCCCCCHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIV-IINPGNPTGQVLTKE 178 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~iv-i~~p~NPtG~~~s~~ 178 (509)
|| +|+++.|+|.++...++..|++++.++..+..++.+|++.|++.+++. ...++++ +++||||||.+++.+
T Consensus 124 gd----~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~~~p~nPtG~~~~~~ 196 (412)
T 1yaa_A 124 DK----LVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKA---PEGSIFVLHSCAHNPTGLDPTSE 196 (412)
T ss_dssp TC----CEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEEECSSCTTTCCCCCHH
T ss_pred CC----EEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHH
Confidence 87 999999999999999999999999999832225789999999999762 0134455 599999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCC-CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC-
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEG-SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL- 256 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~- 256 (509)
++++|+++|+++|+++|+||+|.++.+++. ..+.++..+... .. +..++++++|+||.+ |++|+|+||++++.+
T Consensus 197 ~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~i~~~s~sK~~-~~~GlriG~~~~~~~~ 272 (412)
T 1yaa_A 197 QWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEK-LS--TVSPVFVCQSFAKNA-GMYGERVGCFHLALTK 272 (412)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHH-TT--TTCCEEEEEECTTTS-CCGGGCEEEEEEECCS
T ss_pred HHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhc-CC--CCcceEEEeccCCCC-CCcCCcceEEEEEecC
Confidence 999999999999999999999999887530 012334343221 11 000489999999999 777999999962231
Q ss_pred ---CHH----HHHHHHHhh-hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC
Q psy13922 257 ---DPG----VKAMLHKSI-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 257 ---~~~----~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 328 (509)
+++ +++.+.... ..+.+++.+ ++.++..+++ +.
T Consensus 273 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~-----~~ 313 (412)
T 1yaa_A 273 QAQNKTIKPAVTSQLAKIIRSEVSNPPAY----------------------------------GAKIVAKLLE-----TP 313 (412)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTTSSCCHH----------------------------------HHHHHHHHHH-----SH
T ss_pred CCCCHHHHHHHHHHHHHHHhhccCCCChH----------------------------------HHHHHHHHhC-----CH
Confidence 555 788777643 345555666 4444444433 11
Q ss_pred c-hHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhh
Q psy13922 329 S-YEQFSREKQSVLDSLKQRAKMVADTFNSIE---GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLER 404 (509)
Q Consensus 329 ~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~ 404 (509)
. .+.+.++++++++.++++++.+.+.|++++ ++++..+++++++|+.++ ... +..++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~-~~~~l~~ 376 (412)
T 1yaa_A 314 ELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT----------------PQM-VKRLEET 376 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC----------------HHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCC----------------HHH-HHHHHHh
Confidence 0 112445688999999999999999999873 388888899999996443 222 5778888
Q ss_pred cCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee
Q psy13922 405 TGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL 484 (509)
Q Consensus 405 ~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~ 484 (509)
+||.+.| ++|||++
T Consensus 377 ~gi~v~~------------------------------------------------------------------~~Ris~~ 390 (412)
T 1yaa_A 377 HAVYLVA------------------------------------------------------------------SGRASIA 390 (412)
T ss_dssp HCEECCT------------------------------------------------------------------TSEEEGG
T ss_pred CCEEecc------------------------------------------------------------------CcEEEEc
Confidence 9999874 4789988
Q ss_pred -cChHHHHHHHHHHHHHHHH
Q psy13922 485 -PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 485 -~~~~~i~~~~~~l~~~~~~ 503 (509)
.+++++++++++|+++++.
T Consensus 391 ~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 391 GLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp GCCTTTHHHHHHHHHHHHHH
T ss_pred cCCHhHHHHHHHHHHHHHHh
Confidence 4899999999999998753
No 68
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.4e-37 Score=320.79 Aligned_cols=314 Identities=17% Similarity=0.220 Sum_probs=237.6
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE--eCCHHHHHHHHHHHhh--cCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL--SAGASDGIKSVLKLLI--EDVD 101 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~--t~G~~~al~~~~~~l~--~~gd 101 (509)
.|+.+.+++.+.+.. ....+|++..|..++|+++++++....+..+++++|++ |+|++++++.+++.+. .+||
T Consensus 45 ~~~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd 121 (396)
T 2q7w_A 45 VLTSVKKAEQYLLEN---ETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121 (396)
T ss_dssp CCHHHHHHHHHHHHH---CCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCC
T ss_pred CcHHHHHHHHhhcCc---ccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCC
Confidence 358899999888776 23445988899999999999999655443356789998 9999999999998774 5787
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
+|+++.|+|.++...++..|.+++.++.+++.++.+|++.|++.+++.. ++++++++++||||||.+++.++++
T Consensus 122 ----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~~~v~~~~p~nptG~~~~~~~l~ 195 (396)
T 2q7w_A 122 ----RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQ--AGDVVLFHGCCHNPTGIDPTLEQWQ 195 (396)
T ss_dssp ----EEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCC--TTCEEEEECSSCTTTCCCCCHHHHH
T ss_pred ----EEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999998643457899999999987520 1367777899999999999999999
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH---
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP--- 258 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~--- 258 (509)
+|+++|+++|+++|+||+|.++.+++...+.++..+... ..++++++|+||.+ |++|+|+||+++++.++
T Consensus 196 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~ 268 (396)
T 2q7w_A 196 TLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM------HKELIVASSYSXNF-GLYNERVGACTLVAADSETV 268 (396)
T ss_dssp HHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHH------CSCEEEEEECTTTT-TCGGGCCEEEEEECSSHHHH
T ss_pred HHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhc------CCcEEEEEeccccc-cccccccceEEEEcCCHHHH
Confidence 999999999999999999999887531123344444322 12489999999999 79999999997111255
Q ss_pred -HHHHHHHHhh-hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC-chHHHHH
Q psy13922 259 -GVKAMLHKSI-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP-SYEQFSR 335 (509)
Q Consensus 259 -~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~-~~~~~~~ 335 (509)
++++.+.... ..+.+++.+ ++.++..+++ +. ..+.+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~-----~~~l~~~~~~ 309 (396)
T 2q7w_A 269 DRAFSQMKAAIRANYSNPPAH----------------------------------GASVVATILS-----NDALRAIWEQ 309 (396)
T ss_dssp HHHHHHHHHHHHTTTSSCCHH----------------------------------HHHHHHHHHT-----SHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCCcH----------------------------------HHHHHHHHhc-----ChhhHHHHHH
Confidence 4555555433 234455666 4444444443 11 0113345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC---CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIE---GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
+++++++.++++++.+.+.|+++. ++++..+++++|+|++++ . .++..+++++||.+.|
T Consensus 310 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~~l~~~gv~v~~ 371 (396)
T 2q7w_A 310 ELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT----------------K-EQVLRLREEFGVYAVA 371 (396)
T ss_dssp HHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC----------------H-HHHHHHHHHHCEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCC----------------H-HHHHHHHHhcCeeecC
Confidence 688899999999999999999873 378788899999996553 1 2367788889999874
No 69
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.7e-36 Score=309.54 Aligned_cols=325 Identities=20% Similarity=0.296 Sum_probs=260.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.+.+ |+.+++++.+.+.+ .....|+. .+..++|+++++++ |.. ++++|++|+|++++++.++++++++
T Consensus 38 ~~~~~~~~~~v~~a~~~~~~~---~~~~~y~~-~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~ 108 (367)
T 3euc_A 38 MENPYRLPPALRSELAARLGE---VALNRYPV-PSSEALRAKLKEVM----QVP-AGMEVLLGNGSDEIISMLALAAARP 108 (367)
T ss_dssp SCCCCCCCHHHHHHHHHHHHH---HHTTCSCC-CCHHHHHHHHHHHH----TCC-TTCEEEEEEHHHHHHHHHHHHTCCT
T ss_pred CCCCCCCCHHHHHHHHHHhhh---hhhhcCCC-CcHHHHHHHHHHHh----CCC-CcceEEEcCCHHHHHHHHHHHHcCC
Confidence 44554 78999999998885 23445866 47799999999998 322 6789999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|.++...++..|.+++.++.++ +|.+|++.|++.+++. ++++|++++||||||.+++.++
T Consensus 109 gd----~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~~~~ 178 (367)
T 3euc_A 109 GA----KVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEH----QPAIVYLAYPNNPTGNLFDAAD 178 (367)
T ss_dssp TC----EEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHH----CCSEEEEESSCTTTCCCCCHHH
T ss_pred CC----EEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhcc----CCCEEEEcCCCCCCCCCCCHHH
Confidence 88 999999999999999999999999999876 4689999999999875 7999999999999999999999
Q ss_pred HHHHHHHHHHC--CcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 180 IQDIIKFAHRE--KLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 180 l~~l~~ia~~~--~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++|+++|++| |+++|+||+|.+|...+ ..+.. .. ..++++++|+||. |++|+|+||++ .+
T Consensus 179 l~~i~~~~~~~~~~~~li~De~~~~~~~~~---~~~~~---~~------~~~~i~~~s~sK~--~~~G~r~G~~~---~~ 241 (367)
T 3euc_A 179 MEAIVRAAQGSVCRSLVVVDEAYQPFAQES---WMSRL---TD------FGNLLVMRTVSKL--GLAGIRLGYVA---GD 241 (367)
T ss_dssp HHHHHHHTBTTSCBCEEEEECTTCCSSSCC---SGGGG---GT------CTTEEEEEECCCT--TSCSCCEEEEE---EC
T ss_pred HHHHHHhhhhcCCCcEEEEeCcchhhcccc---hHHHH---hh------CCCEEEEecchhh--cccccCceeee---eC
Confidence 99999999999 99999999999976432 21111 11 2348889999999 37999999998 68
Q ss_pred HHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 258 PGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 258 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
+++++.+...... ++.+.+ .+.++..+++ . .+++
T Consensus 242 ~~~~~~~~~~~~~-~~~~~~----------------------------------~~~a~~~~l~---------~--~~~~ 275 (367)
T 3euc_A 242 PQWLEQLDKVRPP-YNVNVL----------------------------------TEATALFALE---------H--VAVL 275 (367)
T ss_dssp HHHHHHHGGGCCS-SCCCHH----------------------------------HHHHHHHHHT---------T--HHHH
T ss_pred HHHHHHHHHhCCC-CCCCHH----------------------------------HHHHHHHHhc---------C--HHHH
Confidence 9999988766543 345555 5555555544 1 3447
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++.++.++++++.+.+.|+++|++.+.++ ++.|+|++++ +... +...|.++||.++||..|+.
T Consensus 276 ~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~~~---------------~~~~-l~~~l~~~gi~v~~~~~~~~ 338 (367)
T 3euc_A 276 DEQAAQLRAERSRVAEGMAAHGGVTVFPS-AANFLLARVP---------------DAAQ-TFDRLLARKVLIKNVSKMHP 338 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTCEECCC-SSSEEEEECS---------------CHHH-HHHHHHTTTEECEECGGGCG
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEECCC-CCeEEEEECC---------------CHHH-HHHHHHHCCeEEEECCccCC
Confidence 88889999999999999999989986544 5567776664 1333 34556788999999887754
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
.+.+ ++|++++ ++++++++++.|
T Consensus 339 ------------------------------------------------~~~~--------~iRis~~-~~~~i~~~~~~l 361 (367)
T 3euc_A 339 ------------------------------------------------LLAN--------CLRVTVS-TPEENAQFLEAF 361 (367)
T ss_dssp ------------------------------------------------GGTT--------EEEEECC-CHHHHHHHHHHH
T ss_pred ------------------------------------------------CCCC--------EEEEecC-CHHHHHHHHHHH
Confidence 2333 9999988 889999999999
Q ss_pred HHHHH
Q psy13922 498 REFHE 502 (509)
Q Consensus 498 ~~~~~ 502 (509)
+++++
T Consensus 362 ~~~l~ 366 (367)
T 3euc_A 362 AASLQ 366 (367)
T ss_dssp HHHTC
T ss_pred HHHhc
Confidence 88763
No 70
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=2.8e-37 Score=320.54 Aligned_cols=316 Identities=16% Similarity=0.155 Sum_probs=234.5
Q ss_pred CCC-CC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEE--EeCCHHHHHHHHHH--
Q psy13922 22 DDP-RF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI--LSAGASDGIKSVLK-- 94 (509)
Q Consensus 22 ~~~-~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~--~t~G~~~al~~~~~-- 94 (509)
|.| ++ |+.+.+++.++.. .....|++..|.+++|+++++++....+..+++++|. .|.|+++++..+..
T Consensus 49 g~~~d~~~~~~v~~a~~~a~~----~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~ 124 (409)
T 4eu1_A 49 GVYRDDADQPFVLECVKQATL----GTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLL 124 (409)
T ss_dssp SSCCCTTSCCCCCHHHHTCCC----CSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHG
T ss_pred eEEECCCCCEeecHHHHhcCc----cccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHH
Confidence 555 44 5667777766622 3445599999999999999999853322222367884 59999999987654
Q ss_pred -HhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 95 -LLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 95 -~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
.++++|| .|+++.|+|.++...++..|++++.++.+++.+|.+|++.|++.+++.. .+++++++++||||||.
T Consensus 125 ~~~~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~~~i~~~~p~NPtG~ 198 (409)
T 4eu1_A 125 NRFVANCN----RIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAP--EGSVILVHACAHNPTGV 198 (409)
T ss_dssp GGTSSSCC----EEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSC--TTCEEEEESSSCTTTCC
T ss_pred HHhcCCCC----EEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCC--CCcEEEEECCCCCCCCC
Confidence 4456777 9999999999999999999999999998655568999999999997421 14566667999999999
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCC-ccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGS-KFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
+++.+++++|+++|+++|+++|+||+|.++.+++.. ...++..+.. . ..++++++||||.+ |++|+|+||++
T Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-~-----~~~~i~~~S~SK~~-g~~G~riG~~~ 271 (409)
T 4eu1_A 199 DPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVD-M-----VPNLIVAQSFSKNF-GLYGHRCGALH 271 (409)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHT-T-----SSCCEEEEECTTTS-SCGGGCCEEEE
T ss_pred CCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHh-h-----CCcEEEEecCcccc-cCccCCceEEE
Confidence 999999999999999999999999999999876410 1233333321 1 23489999999999 79999999972
Q ss_pred eecCCHH----HHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCC
Q psy13922 253 VINLDPG----VKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGE 327 (509)
Q Consensus 253 ~~~~~~~----~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 327 (509)
++.++++ +++.+..... .+.+++.+ ++.++..+++ +
T Consensus 272 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~l~-----~ 312 (409)
T 4eu1_A 272 ISTASAEEAKRLVSQLALLIRPMYNNPPLY----------------------------------GAWVVSSILK-----D 312 (409)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHHHSSCCHH----------------------------------HHHHHHHHHH-----C
T ss_pred EEeCCHHHHHHHHHHHHHHHhhhcCCCChH----------------------------------HHHHHHHHhC-----C
Confidence 1227888 6666665543 45556666 4444444333 1
Q ss_pred Cc-hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHH
Q psy13922 328 PS-YEQFSREKQSVLDSLKQRAKMVADTFNSIEG----MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELL 402 (509)
Q Consensus 328 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll 402 (509)
+. .++|.++++++++.++++++.+.+.|+++ | +.+..+++++|+|++++ .+++..++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~ll 374 (409)
T 4eu1_A 313 PQLTALWKKELKQMSSRIAEVRKRLVSELKAC-GSVHDWSHIERQVGMMAYTGLT-----------------REQVELLR 374 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCSCCHHHHHSCSSEEECCCC-----------------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcceecCCceEEEEeCCC-----------------HHHHHHHH
Confidence 10 13345668899999999999999999987 4 77778999999995442 23367888
Q ss_pred hhcCeEEec
Q psy13922 403 ERTGICIVP 411 (509)
Q Consensus 403 ~~~gI~v~p 411 (509)
+++||.+.|
T Consensus 375 ~~~gv~v~p 383 (409)
T 4eu1_A 375 SEYHIYMTL 383 (409)
T ss_dssp HHHCEECCT
T ss_pred HcCCEEEcC
Confidence 889999885
No 71
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=3.9e-36 Score=306.47 Aligned_cols=278 Identities=20% Similarity=0.295 Sum_probs=219.3
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC-CCCCCeEEEcCCCChhHHHHHHh
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV-DGKKPGVLIPIPQYPLYSASLAE 123 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g-d~~~~~Vlv~~p~y~~~~~~~~~ 123 (509)
..++|++.. ..++|+++++++ | +++++|++|+|+++++..++++++++| | +|+++.|+|.++...++.
T Consensus 51 ~~~~Y~~~~-~~~lr~~la~~~----~--~~~~~v~~~~G~~~ai~~~~~~~~~~g~d----~Vl~~~p~~~~~~~~~~~ 119 (356)
T 1fg7_A 51 TLNRYPECQ-PKAVIENYAQYA----G--VKPEQVLVSRGADEGIELLIRAFCEPGKD----AILYCPPTYGMYSVSAET 119 (356)
T ss_dssp CTTSCCCSS-CHHHHHHHHHHH----T--SCGGGEEEESHHHHHHHHHHHHHCCTTTC----EEEECSSSCTHHHHHHHH
T ss_pred hhccCCCcc-HHHHHHHHHHHh----C--CChHHEEEcCCHHHHHHHHHHHHhCCCCC----EEEEeCCChHHHHHHHHH
Confidence 355698764 799999999999 3 567899999999999999999999888 7 999999999999999999
Q ss_pred cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcc
Q psy13922 124 FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDN 203 (509)
Q Consensus 124 ~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~ 203 (509)
.|.+++.++.++ +|.+|++.+++.++ ++++|++++||||||.+++.+++++|+++|+ +|+++|+||+|.++
T Consensus 120 ~g~~~~~v~~~~--~~~~d~~~l~~~i~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~ 190 (356)
T 1fg7_A 120 IGVECRTVPTLD--NWQLDLQGISDKLD------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEF 190 (356)
T ss_dssp HTCEEEECCCCT--TSCCCHHHHHTSCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGG
T ss_pred cCCEEEEeeCCC--CCCCCHHHHHHHhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhh
Confidence 999999998874 46899999988774 4899999999999999999999999999999 99999999999987
Q ss_pred cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccc
Q psy13922 204 VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLP 283 (509)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 283 (509)
... .++.++... ..++++++|+||.+ |++|+|+||++ .++++++.+......+ +++.+
T Consensus 191 ~~~-----~~~~~~~~~------~~~~i~~~s~sK~~-g~~G~r~G~~~---~~~~~~~~l~~~~~~~-~~~~~------ 248 (356)
T 1fg7_A 191 CPQ-----ASLAGWLAE------YPHLAILRTLSKAF-ALAGLRCGFTL---ANEEVINLLMKVIAPY-PLSTP------ 248 (356)
T ss_dssp SGG-----GCSGGGTTT------CTTEEEEEESSSTT-CCGGGCCEEEE---ECHHHHHHHHHHSCSS-CSCHH------
T ss_pred cCC-----CcHHHHHhh------CCCEEEEecchHhh-cCchhhhEEEE---eCHHHHHHHHHhcCCC-CCCHH------
Confidence 621 121111111 23488899999999 79999999998 6899999998766544 56666
Q ss_pred cccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCee
Q psy13922 284 QLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSC 363 (509)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 363 (509)
++.++..+++ +...+++++.++.++++++.+.+.|++++++..
T Consensus 249 ----------------------------~~~a~~~~l~---------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 291 (356)
T 1fg7_A 249 ----------------------------VADIAAQALS---------PQGIVAMRERVAQIIAEREYLIAALKEIPCVEQ 291 (356)
T ss_dssp ----------------------------HHHHHHHHTS---------HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred ----------------------------HHHHHHHHhc---------CccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 4554444444 111124788889999999999999999865433
Q ss_pred ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec-CCCCCC
Q psy13922 364 NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP-GAGFGQ 417 (509)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p-g~~f~~ 417 (509)
..+.+++|+|+++. +..++. +.|.++||.++| |..|+.
T Consensus 292 ~~~~~~~~~~~~~~---------------~~~~l~-~~L~~~gI~v~~~g~~~~~ 330 (356)
T 1fg7_A 292 VFDSETNYILARFK---------------ASSAVF-KSLWDQGIILRDQNKQPSL 330 (356)
T ss_dssp ECCCSSSEEEEEET---------------THHHHH-HHHHHTTEECEECTTSTTC
T ss_pred ECCCCCeEEEEECC---------------CHHHHH-HHHHHCCEEEEECCCCCCC
Confidence 34556778887664 133433 445788999999 776654
No 72
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=2.5e-35 Score=299.89 Aligned_cols=291 Identities=18% Similarity=0.258 Sum_probs=231.4
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+++++.+.+.. ...|+ ..+..++|++++++++ +++++|++|+|+++++..+++.+ |
T Consensus 40 ~~~~v~~a~~~~~~~-----~~~y~-~~~~~~l~~~la~~~~------~~~~~i~~~~g~t~al~~~~~~~----d---- 99 (361)
T 3ftb_A 40 IPKSFLNNIDEGIKN-----LGVYP-DVNYRRLNKSIENYLK------LKDIGIVLGNGASEIIELSISLF----E---- 99 (361)
T ss_dssp SCHHHHTTHHHHHHG-----GGSCC-CTTCHHHHHHHHHHHT------CCSCEEEEESSHHHHHHHHHTTC----S----
T ss_pred CCHHHHHHHHHHHHH-----hcCCC-CccHHHHHHHHHHHhC------CCcceEEEcCCHHHHHHHHHHHc----C----
Confidence 378999999998876 24474 4677999999999993 57889999999999999999888 6
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
+|+++.|+|.++...++..|.+++.++.++++ .++++.+++.+++ +++|++++|+||||.+++.+++++|++
T Consensus 100 ~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~------~~~v~i~~p~nptG~~~~~~~l~~i~~ 171 (361)
T 3ftb_A 100 KILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD------VDSVIIGNPNNPNGGLINKEKFIHVLK 171 (361)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT------CSEEEEETTBTTTTBCCCHHHHHHHHH
T ss_pred cEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC------CCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999988664 5577888887763 889999999999999999999999999
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
+|+++|+++|+||+|.++.++ . ..+....... ..++++++|+||.+ |++|+|+||+++ .++++++.+.
T Consensus 172 ~~~~~~~~li~De~~~~~~~~-~--~~~~~~~~~~------~~~~i~~~s~sK~~-~~~G~r~g~~~~--~~~~~~~~~~ 239 (361)
T 3ftb_A 172 LAEEKKKTIIIDEAFIEFTGD-P--SSSFVGEIKN------YSCLFIIRAMTKFF-AMPGIRFGYGIT--NNKEIAAKIK 239 (361)
T ss_dssp HHHHHTCEEEEECSSGGGTCC-T--TSSSGGGTTT------CSSEEEEEESSSTT-SCGGGCCEEEEE--SCHHHHHHHH
T ss_pred HhhhcCCEEEEECcchhhcCC-c--ccchhHhccc------CCCEEEEeeChhhc-CCCCcceeEEEe--CCHHHHHHHH
Confidence 999999999999999998875 1 1122211111 23488899999999 799999999864 7999999998
Q ss_pred HhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHH
Q psy13922 266 KSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLK 345 (509)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (509)
..... ++++.+ ++.++..+++ + .+++++.++.++
T Consensus 240 ~~~~~-~~~~~~----------------------------------~~~~~~~~l~---------~--~~~~~~~~~~~~ 273 (361)
T 3ftb_A 240 AKQNP-WNINCF----------------------------------AEMAAINCLK---------D--TNYIEESLLWIK 273 (361)
T ss_dssp TTSCT-TCSCHH----------------------------------HHHHHHHTSS---------C--HHHHHHHHHHHH
T ss_pred hhCCC-CCCCHH----------------------------------HHHHHHHHhc---------C--HHHHHHHHHHHH
Confidence 76553 355666 5555555554 1 244788899999
Q ss_pred HHHHHHHHHHhcCCCCe-eccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 346 QRAKMVADTFNSIEGMS-CNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 346 ~~~~~l~~~L~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++++.+.+.|+++|++. +.++.+++ +|+++. + .+...+...+ .++||.+.||..|+.
T Consensus 274 ~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~------------~-~~~~~l~~~l-~~~gi~v~~g~~~~~ 331 (361)
T 3ftb_A 274 KERKRFIEELNKIGFIKRVFSPHANF-VLCRLE------------N-ISGEKLYDSL-LKEDIVIRRCCNFIG 331 (361)
T ss_dssp HHHHHHHHHHHHSSSEEEEECCSSSE-EEEEES------------S-SCHHHHHHHH-HTTTEECEECTTSTT
T ss_pred HHHHHHHHHHHhCCCCceecCCCCeE-EEEEcC------------C-CCHHHHHHHH-HHCCeEEeeCccCCC
Confidence 99999999999998888 66776654 565554 1 1344444444 455999999998876
No 73
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=1.3e-35 Score=302.95 Aligned_cols=323 Identities=19% Similarity=0.241 Sum_probs=245.1
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+++++.+.+.. ..+|++ .|..++|+++++++. +++++|++|+|+++++..+++++ ++|
T Consensus 38 ~~~~v~~a~~~~~~~-----~~~y~~-~~~~~l~~~la~~~~------~~~~~v~~~~g~~~al~~~~~~~--~gd---- 99 (364)
T 1lc5_A 38 MPVSVKRALIDNLDC-----IERYPD-ADYFHLHQALARHHQ------VPASWILAGNGETESIFTVASGL--KPR---- 99 (364)
T ss_dssp CCHHHHHHHHHTGGG-----GGSCCC-TTCHHHHHHHHHHHT------SCGGGEEEESSHHHHHHHHHHHH--CCS----
T ss_pred CCHHHHHHHHHHHHH-----hhcCCC-CCHHHHHHHHHHHHC------cCHHHEEECCCHHHHHHHHHHHc--CCC----
Confidence 478899998888765 345865 478999999999992 56789999999999999999999 557
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.|+++.|+|.++...++..|.+++.++.+++.+|.+ ++.+.+.+.. ++++|++++|+||||.++|.+++++|++
T Consensus 100 ~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~ 173 (364)
T 1lc5_A 100 RAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTP-----DLDCLFLCTPNNPTGLLPERPLLQAIAD 173 (364)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCT-----TCCEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred eEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccC-----CCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999876444544 4555554433 6899999999999999999999999999
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
+|+++|+++|+||+|.++.+++. .... .... ..++++++|+||.+ |++|+|+||+++ .++++++.+.
T Consensus 174 ~~~~~~~~li~De~~~~~~~~~~-~~~~---~~~~------~~~~i~~~s~sK~~-~~~G~r~G~~~~--~~~~~~~~l~ 240 (364)
T 1lc5_A 174 RCKSLNINLILDEAFIDFIPHET-GFIP---ALKD------NPHIWVLRSLTKFY-AIPGLRLGYLVN--SDDAAMARMR 240 (364)
T ss_dssp HHHHHTCEEEEECTTGGGSTTCC-CSGG---GCTT------CTTEEEEEESTTTT-TCTTTCCEEEEC--CCHHHHHHHH
T ss_pred HhhhcCcEEEEECcChhhccCcc-chhh---Hhcc------CCCEEEEEECchhh-cCCccceEEEEE--CCHHHHHHHH
Confidence 99999999999999999876421 1111 1111 22478899999999 799999999973 6899999888
Q ss_pred HhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHH
Q psy13922 266 KSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLK 345 (509)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (509)
.... .++++.+ .+.++..+++ . .+++++.++.++
T Consensus 241 ~~~~-~~~~~~~----------------------------------~~~~~~~~l~---------~--~~~~~~~~~~~~ 274 (364)
T 1lc5_A 241 RQQM-PWSVNAL----------------------------------AALAGEVALQ---------D--SAWQQATWHWLR 274 (364)
T ss_dssp HHSC-TTCSCHH----------------------------------HHHHHHHGGG---------C--HHHHHHHHHHHH
T ss_pred HhCC-CCCCCHH----------------------------------HHHHHHHHHh---------C--cHHHHHHHHHHH
Confidence 7654 3345555 4555555544 1 235788899999
Q ss_pred HHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccc
Q psy13922 346 QRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFR 425 (509)
Q Consensus 346 ~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r 425 (509)
++++.+.+.|+++|++.+.++.+ .|+|++++ . +...+. ..|.++||.+.||..|+.
T Consensus 275 ~~~~~l~~~L~~~~~~~~~~~~g-~~~~~~~~--~------------~~~~l~-~~l~~~gi~v~~g~~~~~-------- 330 (364)
T 1lc5_A 275 EEGARFYQALCQLPLLTVYPGRA-NYLLLRCE--R------------EDIDLQ-RRLLTQRILIRSCANYPG-------- 330 (364)
T ss_dssp HHHHHHHHHHHTSTTEEECCCSS-SEEEEEES--C------------TTCCHH-HHHHTTTEECEECTTSTT--------
T ss_pred HHHHHHHHHHhcCCCCEECCCCC-eEEEEECC--C------------cHHHHH-HHHHHCCcEEeeCcccCC--------
Confidence 99999999999988888776655 45676554 1 122233 444567999999988764
Q ss_pred cchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHHHH
Q psy13922 426 QQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~~~ 504 (509)
.+.+ ++|++++ ++++++++++.|++++++.
T Consensus 331 ----------------------------------------~~~~--------~iRis~~-~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 331 ----------------------------------------LDSR--------YYRVAIR-SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp ----------------------------------------CCTT--------EEEEECC-CHHHHHHHHHHHHHHC---
T ss_pred ----------------------------------------CCCC--------EEEEEeC-CHHHHHHHHHHHHHHhhcc
Confidence 2223 8999987 4677777788777776554
No 74
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=2.7e-36 Score=311.11 Aligned_cols=310 Identities=15% Similarity=0.183 Sum_probs=232.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE--eCCHHHHHHHHHHHhhc--CCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL--SAGASDGIKSVLKLLIE--DVDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~--t~G~~~al~~~~~~l~~--~gd~ 102 (509)
|+.+.+++.+.+.. ....+|++..|..++|+++++++... .+++++|++ |+|++++++.+++.+.. +||
T Consensus 46 ~~~v~~a~~~~~~~---~~~~~y~~~~g~~~lr~~la~~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd- 118 (394)
T 2ay1_A 46 MRAVHAAEQRMLET---ETTKTYAGLSGEPEFQKAMGELILGD---GLKSETTATLATVGGTGALRQALELARMANPDL- 118 (394)
T ss_dssp CHHHHHHHHHHHHH---CCCCCCCCSSCCHHHHHHHHHHHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTC-
T ss_pred cHHHHHHHHHhcCC---cccCCCCCCCCcHHHHHHHHHHHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCC-
Confidence 68899999888776 23455988889999999999998432 236789999 99999999999988865 787
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
+|+++.|+|.++...++..|.+++.++.+++.++.+|++.+++.+++. ..+++++++++||||||.++|.+++++
T Consensus 119 ---~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~~~~~~~~~nptG~~~~~~~l~~ 193 (394)
T 2ay1_A 119 ---RVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAA--KKGDMVLLHGCCHNPTGANLTLDQWAE 193 (394)
T ss_dssp ---CEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTC--CTTCEEEEESSSCTTTCCCCCHHHHHH
T ss_pred ---EEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhC--CCCCEEEEeCCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999999999864445789999999999752 013566777999999999999999999
Q ss_pred HHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHH
Q psy13922 183 IIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKA 262 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~ 262 (509)
|+++|+++|+++|+||+|.++.+++.....++..+.. . ..++++++|+||.+ |++|+|+||+++++.++++++
T Consensus 194 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~-----~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~ 266 (394)
T 2ay1_A 194 IASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIAS-R-----IPEVLIAASCSKNF-GIYRERTGCLLALCADAATRE 266 (394)
T ss_dssp HHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHH-H-----CSSEEEEEECTTTT-TCGGGCEEEEEEECSSHHHHH
T ss_pred HHHHHHHCCCEEEEecCccccccCcccchHHHHHHhh-c-----CCCEEEEEeccCCC-cCcCCccceEEEEeCCHHHHH
Confidence 9999999999999999999988752111223333322 1 12489999999999 799999999972112666554
Q ss_pred HH----HHhh-hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCc-hHHHHHH
Q psy13922 263 ML----HKSI-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPS-YEQFSRE 336 (509)
Q Consensus 263 ~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~-~~~~~~~ 336 (509)
.+ .... ..+.+++.+ ++.++..+++ +.. .+.+.++
T Consensus 267 ~l~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~-----~~~l~~~~~~~ 307 (394)
T 2ay1_A 267 LAQGAMAFLNRQTYSFPPFH----------------------------------GAKIVSTVLT-----TPELRADWMAE 307 (394)
T ss_dssp HHHHHHHHHHHTTTSSCCCH----------------------------------HHHHHHHHHH-----SHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCChH----------------------------------HHHHHHHHhc-----ChHHHHHHHHH
Confidence 43 3222 234444555 4444433332 000 0123456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC---CCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIE---GMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
++++++.++++++.+.+.|+++. ++++..+.+++|+|++++ .+ .+..+++++||.+.|
T Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~----------------~~-~~~~~l~~~gi~v~~ 368 (394)
T 2ay1_A 308 LEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT----------------PE-QVKRIKEEFGIYMVG 368 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC----------------HH-HHHHHHHHHCEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCC----------------HH-HHHHHHHhCCEEecC
Confidence 88899999999999999998863 477778888999996553 12 257788889999874
No 75
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=3.3e-37 Score=318.65 Aligned_cols=305 Identities=14% Similarity=0.188 Sum_probs=230.8
Q ss_pred CcccCCCCcch-----HHHHHHHHHHHhhhcCCCCCC-CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH
Q psy13922 45 SVGSYTDSPGI-----EIIRRHVAQYISRRDGQPADW-QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS 118 (509)
Q Consensus 45 ~~~~Y~~~~g~-----~~lr~~va~~l~~~~g~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~ 118 (509)
...+|++..|. ++||+++|++++ .+|+.+++ ++|++|+|+++++..++++++++||+++++|+++.|+|.+|.
T Consensus 55 ~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~ 133 (391)
T 3bwn_A 55 LMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYV 133 (391)
T ss_dssp TCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHH
T ss_pred hhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHH
Confidence 34569999998 999999999998 56888877 599999999999999999999887533348999999999999
Q ss_pred HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 119 ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 119 ~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
..++..|++++.++.+.+ .++ .. ++++|++++||||||.+++ +|++.+++++++||+||
T Consensus 134 ~~~~~~g~~~~~~~~d~~---~l~--------~~-----~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De 192 (391)
T 3bwn_A 134 EETTYVRSGMYKWEGDAW---GFD--------KK-----GPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDF 192 (391)
T ss_dssp HHHHTTCBTTEEEEEEST---TCC--------CC-----SCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEEC
T ss_pred HHHHHcCCeEEEecCCHH---HcC--------CC-----CCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeC
Confidence 999999999999988754 222 12 6899999999999999996 34442222339999999
Q ss_pred cCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchh
Q psy13922 199 VYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 199 ay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
+|.+ +. ..++.. ...++|+++||||.| |++|+|+||+++ .++++++.+..... ...+++.+
T Consensus 193 ~y~~----~~--~~~l~~---------~~~~~i~~~S~SK~~-g~~GlRiG~~~~--~~~~l~~~l~~~~~~~~~~~~~~ 254 (391)
T 3bwn_A 193 AYYW----PH--YTPITR---------RQDHDIMLFTFSKIT-GHAGSRIGWALV--KDKEVAKKMVEYIIVNSIGVSKE 254 (391)
T ss_dssp TTCS----TT--TSCCCC---------CBCCSEEEEEHHHHH-SCGGGCEEEEEE--CCHHHHHHHHHHHHHHHSSCCHH
T ss_pred CCCC----CC--CCcccc---------CCCCeEEEEechhhc-CCCccceEEEEe--cCHHHHHHHHHHhcccccCCCHH
Confidence 9974 11 112111 123589999999999 799999999972 48999999988765 34566777
Q ss_pred hhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH-------HHHHHHHHHHHHHHHHHH
Q psy13922 278 ALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ-------FSREKQSVLDSLKQRAKM 350 (509)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 350 (509)
.|.++..+++. + .. +.++++++++.++++++.
T Consensus 255 ----------------------------------~q~a~~~~l~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (391)
T 3bwn_A 255 ----------------------------------SQVRTAKILNV-----L--KETCKSESESENFFKYGREMMKNRWEK 293 (391)
T ss_dssp ----------------------------------HHHHHHHHHHH-----H--HHHTTCCCTTTSHHHHHHHHHHHHHHH
T ss_pred ----------------------------------HHHHHHHHHhC-----c--chhccccccHHHHHHHHHHHHHHHHHH
Confidence 44444433320 0 00 133588899999999999
Q ss_pred HHHHHhcCCCCeeccC-------------CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 351 VADTFNSIEGMSCNPV-------------QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 351 l~~~L~~~~g~~~~~~-------------~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+.+.|+++|++.+..+ .+|+|+|++++. .+ ++..+++++||.++||..|+.
T Consensus 294 l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~---------------~~-~~~~~l~~~gV~v~pg~~fg~ 357 (391)
T 3bwn_A 294 LREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE---------------ET-DLVSELRRHKVMSRAGERCGS 357 (391)
T ss_dssp HHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS---------------SC-CHHHHHHHTTEECEEGGGGTC
T ss_pred HHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCc---------------HH-HHHHHHHHCCEEEccCCCCCC
Confidence 9999999877766543 455689977751 11 256788899999999998754
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKF 497 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l 497 (509)
+.+ ++|||++.+++++++++++|
T Consensus 358 -------------------------------------------------~~~--------~iRis~~~~~e~i~~~~~~L 380 (391)
T 3bwn_A 358 -------------------------------------------------DKK--------HVRVSMLSREDVFNVFLERL 380 (391)
T ss_dssp -------------------------------------------------CTT--------EEEEESCSCHHHHHHHHHHH
T ss_pred -------------------------------------------------CCC--------EEEEEecCCHHHHHHHHHHH
Confidence 112 99999999999999999999
Q ss_pred HHHHHH
Q psy13922 498 REFHEE 503 (509)
Q Consensus 498 ~~~~~~ 503 (509)
++++++
T Consensus 381 ~~~~~~ 386 (391)
T 3bwn_A 381 ANMKLI 386 (391)
T ss_dssp HSCC--
T ss_pred HHHHHh
Confidence 988764
No 76
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=2.4e-34 Score=294.37 Aligned_cols=322 Identities=19% Similarity=0.248 Sum_probs=248.8
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+.+++.+.+.... ....+|++..+ .++|+++++++.+++|.++++++|++|+|+++++..++++++++||
T Consensus 44 ~~~~v~~a~~~~~~~~~-~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd---- 117 (369)
T 3cq5_A 44 PSEALVADLVATVDKIA-TELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGR---- 117 (369)
T ss_dssp CCHHHHHHHHHHHHHHG-GGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTC----
T ss_pred CCHHHHHHHHHHHHhcc-cccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCC----
Confidence 36889999998887632 12445877767 7999999999998888888889999999999999999999998888
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.|+++.|+|.++...++..|.+++.++.++ +|.+|++.|++.+++. ++++|++++|+||||.+++.+++.+|++
T Consensus 118 ~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~~~~l~~l~~ 191 (369)
T 3cq5_A 118 TALGFQPSYSMHPILAKGTHTEFIAVSRGA--DFRIDMDVALEEIRAK----QPDIVFVTTPNNPTGDVTSLDDVERIIN 191 (369)
T ss_dssp EEEEEESSCTHHHHHHHHTTCEEEEEECCT--TSSCCHHHHHHHHHHH----CCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEcCCChHHHHHHHHHcCCEEEEecCCc--CCCCCHHHHHHHhhcc----CCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999653 4689999999999864 6899999999999999999666666555
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCc-eeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSM-ELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l 264 (509)
.+++++|+||+|.++.++ .+...+... .. +++++.|+||.+ |++|+|+||++ .++++++.+
T Consensus 192 ---~~~~~li~De~~~~~~~~-----~~~~~~~~~------~~~~~i~~~s~sK~~-~~~G~r~G~~~---~~~~~~~~l 253 (369)
T 3cq5_A 192 ---VAPGIVIVDEAYAEFSPS-----PSATTLLEK------YPTKLVVSRTMSKAF-DFAGGRLGYFV---ANPAFIDAV 253 (369)
T ss_dssp ---HCSSEEEEECTTGGGCCS-----CCGGGGTTT------CTTTEEEEEESSSTT-SCGGGCCEEEE---ECTHHHHHH
T ss_pred ---hCCCEEEEECCchhhcCC-----cchHHHHhh------CCCCEEEEEechHhc-CCcccceEEEE---eCHHHHHHH
Confidence 556999999999998753 121111111 12 478899999999 78999999998 578888888
Q ss_pred HHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHH
Q psy13922 265 HKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSL 344 (509)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (509)
......+ +++.+ .+.++..+++ ..+++++.++.+
T Consensus 254 ~~~~~~~-~~~~~----------------------------------~~~a~~~~l~-----------~~~~~~~~~~~~ 287 (369)
T 3cq5_A 254 MLVRLPY-HLSAL----------------------------------SQAAAIVALR-----------HSADTLGTVEKL 287 (369)
T ss_dssp HTTSCTT-CSCHH----------------------------------HHHHHHHHHH-----------THHHHHTHHHHH
T ss_pred HHcCCCC-CCCHH----------------------------------HHHHHHHHhc-----------CHHHHHHHHHHH
Confidence 7655433 45555 4444444432 123477888899
Q ss_pred HHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCcccc
Q psy13922 345 KQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHF 424 (509)
Q Consensus 345 ~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~ 424 (509)
+++++.+.+.|++. |+.+.++.+ .|+|++++. +...+ .+.|.++||.+.|| +.
T Consensus 288 ~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~~~~--------------~~~~l-~~~l~~~gi~v~~~---~~------- 340 (369)
T 3cq5_A 288 SVERVRVAARLEEL-GYAVVPSES-NFVFFGDFS--------------DQHAA-WQAFLDRGVLIRDV---GI------- 340 (369)
T ss_dssp HHHHHHHHHHHHHH-TCEEECCSS-SEEEEECCS--------------SHHHH-HHHHHHTTEECBCC---SC-------
T ss_pred HHHHHHHHHHHHhC-CCEECCCCC-eEEEEECCC--------------CHHHH-HHHHHHCCEEEEEC---CC-------
Confidence 99999999999885 888775554 566765531 23343 44556889999987 11
Q ss_pred ccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHH
Q psy13922 425 RQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 425 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~ 502 (509)
++ ++|++++ +++++++++++|+++++
T Consensus 341 -----------------------------------------~~----------~iRis~~-~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 341 -----------------------------------------AG----------HLRTTIG-VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp -----------------------------------------TT----------EEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred -----------------------------------------CC----------eEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 22 8999998 78999999999988764
No 77
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.5e-34 Score=289.71 Aligned_cols=280 Identities=19% Similarity=0.266 Sum_probs=214.8
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+.+++.+.+.. ..+|+ ..|..++|++++++++ +++++|++|+|+++++..++..+ +||
T Consensus 30 ~~~~v~~a~~~~~~~-----~~~y~-~~~~~~lr~~la~~~~------~~~~~i~~t~G~~~~l~~~~~~~--~gd---- 91 (337)
T 3p1t_A 30 VEPRVQAAIAAAAAR-----INRYP-FDAEPRVMRKLAEHFS------CPEDNLMLVRGIDECFDRISAEF--SSM---- 91 (337)
T ss_dssp CCHHHHHHHHHHGGG-----TTSCC-TTHHHHHHHHHHHHHT------SCGGGEEEESHHHHHHHHHHHHS--TTS----
T ss_pred CCHHHHHHHHHhhhh-----hccCC-CCchHHHHHHHHHHhC------cCHHHEEEeCCHHHHHHHHHHhc--CCC----
Confidence 478899999888765 44585 5688999999999983 56789999999999999999998 787
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
+|+++.|+|.++...++..|++++.++.++ +|.+|++.|++. . +++++++++||||||.+++.+++.+
T Consensus 92 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~--~-----~~~~v~i~~p~nptG~~~~~~~l~~--- 159 (337)
T 3p1t_A 92 RFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV--S-----RDDCVVLANPSNPTGQALSAGELDQ--- 159 (337)
T ss_dssp EEEEESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHHTTC--C-----TTEEEEEESSCTTTCCCCCHHHHHH---
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHhh--c-----CCCEEEEeCCCCCCCCCCCHHHHHH---
Confidence 999999999999999999999999999875 368899998765 2 6899999999999999999665555
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
+|+++++ +|+||+|.+|...+. ... .. ..++++++|+||.+ |++|+|+||++ .++++++.+.
T Consensus 160 l~~~~~~-~ivDea~~~~~~~~~-~~~-------~~-----~~~~i~~~S~sK~~-g~~G~r~G~~~---~~~~~~~~l~ 221 (337)
T 3p1t_A 160 LRQRAGK-LLIDETYVDYSSFRA-RGL-------AY-----GENELVFRSFSKSY-GLAGLRLGALF---GPSELIAAMK 221 (337)
T ss_dssp HHHHCSE-EEEECTTGGGSSCSS-SCC-------CC-----BTTEEEEEESSSTT-CCTTTCCEEEE---CCHHHHHHHH
T ss_pred HHHhCCc-EEEECCChhhccccc-ccc-------cc-----CCCEEEEeeCchhc-cCcchheEEEE---eCHHHHHHHH
Confidence 5667786 566999998765421 110 00 23478899999999 79999999998 7999999887
Q ss_pred HhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHH
Q psy13922 266 KSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLK 345 (509)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (509)
+... ..+++.+ .+.++..+++. . ++.++.++.+.
T Consensus 222 ~~~~-~~~~~~~----------------------------------~~~a~~~~l~~--------~---~~~~~~~~~~~ 255 (337)
T 3p1t_A 222 RKQW-FCNVGTL----------------------------------DLHALEAALDN--------D---RAREAHIAKTL 255 (337)
T ss_dssp TTSC-TTCSCHH----------------------------------HHHHHHHHHTC--------H---HHHHHHHHHHH
T ss_pred hhcC-CCCCCHH----------------------------------HHHHHHHHhCC--------H---HHHHHHHHHHH
Confidence 7543 3445555 45554444441 1 12345555667
Q ss_pred HHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 346 QRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 346 ~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++++.+.+.|+++ |+.+.++.+++++| ... +... +...|.++||.+.||..|+.
T Consensus 256 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~-~~~---------------~~~~-~~~~l~~~gi~v~~g~~~~~ 309 (337)
T 3p1t_A 256 AQRRRVADALRGL-GYRVASSEANFVLV-ENA---------------AGER-TLRFLRERGIQVKDAGQFGL 309 (337)
T ss_dssp HHHHHHHHHHHHT-TCCBCCCSSSEEEE-ECT---------------TTHH-HHHHHHHTTEECEEGGGGTC
T ss_pred HHHHHHHHHHHHC-cCEECCCCCeEEEE-EcC---------------CHHH-HHHHHHHCCeEEEECccCCC
Confidence 7788899999988 88888888776655 232 1222 45677888999999988765
No 78
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.1e-34 Score=292.37 Aligned_cols=287 Identities=17% Similarity=0.240 Sum_probs=214.8
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ |+.+++++.+.+.. ...|++..+ .++|++++++++ +++++|++|+|+++++..+++++.
T Consensus 23 ~~~~~~~~~~v~~a~~~~~~~-----~~~y~~~~~-~~lr~~la~~~~------~~~~~i~~t~g~~~al~~~~~~l~-- 88 (350)
T 3fkd_A 23 TVWTDGDKDHLEKHLVENLNC-----IRHYPEPDA-GTLRQMLAKRNS------VDNNAILVTNGPTAAFYQIAQAFR-- 88 (350)
T ss_dssp CSCCCSCCHHHHHHHHHTGGG-----GGSCCCTTC-HHHHHHHHHHTT------CCGGGEEEESHHHHHHHHHHHHTT--
T ss_pred CCCCCCCCHHHHHHHHHhHhH-----HhcCCCCcH-HHHHHHHHHHhC------cCHHHEEEcCCHHHHHHHHHHHHC--
Confidence 44444 67899998887733 445888777 899999999983 678899999999999999999998
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEec-CCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYL-DESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
|| +|+++.|+|.++...++..|++++.++. ++..++ ++ . ++++|++++|+||||.+++.+
T Consensus 89 gd----~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~--------~-----~~~~v~i~~p~nptG~~~~~~ 149 (350)
T 3fkd_A 89 GS----RSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEA--DF--------S-----NMDFCWLCNPNNPDGRLLQRT 149 (350)
T ss_dssp TC----EEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGS--CC--------T-----TCSEEEEESSCTTTCCCCCHH
T ss_pred CC----EEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccC--cc--------C-----CCCEEEEeCCCCCcCCCCCHH
Confidence 77 9999999999999999999999999998 654433 32 3 799999999999999999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++.+|+++|+++ +||+||+|.++.+++. ... .. .. ...++++++|+||.+ |++|+|+||++ .++
T Consensus 150 ~l~~l~~~~~~~--~li~Dea~~~~~~~~~--~~~-~~----~~---~~~~~i~~~S~sK~~-~~~G~r~G~~~---~~~ 213 (350)
T 3fkd_A 150 EILRLLNDHPDT--TFVLDQSYVSFTTEEV--IRP-AD----IK---GRKNLVMVYSFSHAY-GIPGLRIGYIV---ANK 213 (350)
T ss_dssp HHHHHHHHCTTS--EEEEECTTTTSCSSCC--CCG-GG----GT---TCSSEEEEEESHHHH-SCGGGCCEEEE---CCH
T ss_pred HHHHHHHhCCCC--EEEEECchhhhccCcc--hhh-HH----hh---cCCCEEEEecCchhc-cCcchheEeEE---eCH
Confidence 999998888765 9999999999887642 111 11 11 123489999999999 79999999998 799
Q ss_pred HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 259 GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 259 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
++++.+...... ++++.+ .+.++..+++.. +.+ .+
T Consensus 214 ~~~~~~~~~~~~-~~~~~~----------------------------------~~~~~~~~l~~~-------~~~---~~ 248 (350)
T 3fkd_A 214 DFMKRVAAFSTP-WAVNAL----------------------------------AIEAAKFILIHP-------AQF---TL 248 (350)
T ss_dssp HHHHHHHTTCCT-TCSCHH----------------------------------HHHHHHHHHHCT-------TTT---CC
T ss_pred HHHHHHHHhCCC-CCCCHH----------------------------------HHHHHHHHHhCH-------HHH---HH
Confidence 999999876653 345555 333333332210 011 12
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++++.. ++++.+.+.|+++|++.+.++.++ |+|++++. + +..++...+++++||.++||..|+.
T Consensus 249 ~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~-----------~--~~~~l~~~L~~~~gi~v~~g~~f~~ 312 (350)
T 3fkd_A 249 PIRKWQ-RNTVDFITALNRLDGVEVHPSGTT-FFLLRLKK-----------G--TAAELKKYMLEEYNMLIRDASNFRG 312 (350)
T ss_dssp CHHHHH-HHHHHHHHHHHHSTTEEECCCSSS-EEEEEESS-----------S--CHHHHHHHHHHTTCEECEECTTSTT
T ss_pred HHHHHH-HHHHHHHHHHhcCCCcEECCCCCc-EEEEECCC-----------C--CHHHHHHHHHHHCCEEEEeCccCCC
Confidence 222233 778888889988888888766655 45655541 1 3455555666559999999998876
No 79
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=5.8e-36 Score=312.82 Aligned_cols=326 Identities=14% Similarity=0.128 Sum_probs=244.2
Q ss_pred CCCCCC--HHHHHHHHHHHhcccCCCcccCCCCc-c---hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH
Q psy13922 22 DDPRFP--DDVKQRAQAVLDGCRGQSVGSYTDSP-G---IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL 95 (509)
Q Consensus 22 ~~~~~p--~~v~~a~~~~l~~~~~~~~~~Y~~~~-g---~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 95 (509)
+.|+++ +.+.+++.+++..... ....|++.. | .++||++++++++.+.+..+++++|++|+|+++++.+++.+
T Consensus 64 g~~~~~~~~~v~~a~~~~l~~~~~-~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~ 142 (427)
T 2hox_A 64 GDGLFLEEYWKQHKEASAVLVSPW-HRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVIS 142 (427)
T ss_dssp CCCGGGHHHHTTSHHHHCEEECTT-TTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHhHHhhhhcCCc-ccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHH
Confidence 667764 4677777776643221 222398888 8 89999999999998766668899999999999999999999
Q ss_pred h--------hcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCC
Q psy13922 96 L--------IEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINP 167 (509)
Q Consensus 96 l--------~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p 167 (509)
+ +++|| .|+++.|+|..+...++..|.+++.+ .+|++.|++.+++ ++++|++++|
T Consensus 143 l~~~~~~~~~~~Gd----~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~-----~~k~v~l~~p 205 (427)
T 2hox_A 143 LSPNMTATPDAPES----KVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNP-----EQYIEMVTSP 205 (427)
T ss_dssp HSCCTTTCTTSCCE----EEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCG-----GGEEEEEESS
T ss_pred HhhccccccCCCCC----EEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcC-----CceEEEEcCC
Confidence 9 88888 99999999999999999999987743 4567778777765 6899999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe
Q psy13922 168 GNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR 247 (509)
Q Consensus 168 ~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr 247 (509)
|||||.+++ +.+ + ++..|+|+.|.+ + +.++.++. ..++|+++||||.+ |++|+|
T Consensus 206 ~NPtG~~~~-~~l-------~--~~~~i~d~~~~~----~---~~s~~~~~--------~~~~i~~~S~SK~~-g~~G~R 259 (427)
T 2hox_A 206 NNPEGLLRH-AVI-------K--GCKSIYDMVYYW----P---HYTPIKYK--------ADEDILLFTMSKFT-GHSGSR 259 (427)
T ss_dssp CTTTCCCCC-CSS-------T--TCEEEEECTTCS----T---TTSCCCSC--------BCCSEEEEEHHHHT-SCGGGC
T ss_pred CCCcccccH-HHH-------c--CCCEEEeecccC----C---CCCccccC--------CCceEEEEeChhcC-CCCCce
Confidence 999999999 522 2 567788887753 1 12221111 22489999999999 799999
Q ss_pred eEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCC
Q psy13922 248 GGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPG 326 (509)
Q Consensus 248 ~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 326 (509)
+||++. .++++++.+.+... ...+++.+ .|.++..+++..
T Consensus 260 iG~~~~--~~~~l~~~l~~~~~~~~~~~~~~----------------------------------~q~a~~~~L~~~--- 300 (427)
T 2hox_A 260 FGWALI--KDESVYNNLLNYMTKNTEGTPRE----------------------------------TQLRSLKVLKEV--- 300 (427)
T ss_dssp CEEEEE--CCHHHHHHHHHHHHHHTSSCCHH----------------------------------HHHHHHHHHHHH---
T ss_pred EEEEEE--CCHHHHHHHHHHHHhcCCCCCHH----------------------------------HHHHHHHHhhcc---
Confidence 999982 36999999988776 34566666 333333332200
Q ss_pred CCchH-----HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCee--------------ccCCceeEEeecCCCCHHHHHHHh
Q psy13922 327 EPSYE-----QFSREKQSVLDSLKQRAKMVADTFNSIEGMSC--------------NPVQGAMYAFPQMKLPAKAIAKAK 387 (509)
Q Consensus 327 ~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--------------~~~~~g~~~~~~~~~~~~~~~~~~ 387 (509)
..|- .+.+++++.++.++++++.+.+.|++++|+.+ ..|++++|+|++++.
T Consensus 301 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~--------- 370 (427)
T 2hox_A 301 -VAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW--------- 370 (427)
T ss_dssp -HHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS---------
T ss_pred -hhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCC---------
Confidence 0000 01234678889999999999999998866554 346679999987751
Q ss_pred hcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCC
Q psy13922 388 AEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPG 467 (509)
Q Consensus 388 ~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (509)
++.+++..+++++||.++||..|+.. ++
T Consensus 371 -----~~~~~~~~ll~~~gI~v~pg~~f~~~-----------------------------------------------~~ 398 (427)
T 2hox_A 371 -----EEDKDCYQTFQNGRINTQNGVGFEAS-----------------------------------------------SR 398 (427)
T ss_dssp -----GGGCSHHHHHHHTTEECEEGGGGTSC-----------------------------------------------TT
T ss_pred -----cHHHHHHHHHHHCCEEEcCCCccCCC-----------------------------------------------CC
Confidence 12334667788899999999877541 23
Q ss_pred CCCCCCCCceeEEEEeecChHHHHHHHHHHHHHHH
Q psy13922 468 AGFGQVPGTYHFRTTILPQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 468 ~~~~~~~~~~~~Rls~~~~~~~i~~~~~~l~~~~~ 502 (509)
+||+|++.++++|++++++|+++++
T Consensus 399 ----------~~Ris~~~~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 399 ----------YVRLSLIKTQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp ----------EEEEECSSCHHHHHHHHHHHHHHHT
T ss_pred ----------EEEEEecCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999874
No 80
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=8.8e-33 Score=281.61 Aligned_cols=289 Identities=15% Similarity=0.205 Sum_probs=218.6
Q ss_pred CCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+.|.+ |+.+++++.+.+.... .....|+.. +..++|++++++++ +++++|++|+|+++++..++++++++
T Consensus 34 ~~~~~~~~~~v~~a~~~~~~~~~-~~~~~y~~~-~~~~lr~~la~~~g------~~~~~i~~t~g~~~al~~~~~~l~~~ 105 (360)
T 3hdo_A 34 NENPYPPSPEVVKAILEELGPDG-AALRIYPSA-SSQKLREVAGELYG------FDPSWIIMANGSDEVLNNLIRAFAAE 105 (360)
T ss_dssp CCCSSCCCHHHHHHHHHHHTTTC-GGGGSCCCS-SCHHHHHHHHHHHT------CCGGGEEEESSHHHHHHHHHHHHCCT
T ss_pred CCCCCCCCHHHHHHHHHHHhccc-chhhcCCCC-chHHHHHHHHHHhC------cCcceEEEcCCHHHHHHHHHHHHhCC
Confidence 55555 6799999999887721 124458655 45899999999993 67889999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
|| +|+++.|+|.++...++..|++++.++.+++ +.+ +.+++ .. +++++++++|+||||.+++.+
T Consensus 106 gd----~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~--~~~--~~l~~---~~----~~~~v~i~~p~nptG~~~~~~- 169 (360)
T 3hdo_A 106 GE----EIGYVHPSYSYYGTLAEVQGARVRTFGLTGD--FRI--AGFPE---RY----EGKVFFLTTPNAPLGPSFPLE- 169 (360)
T ss_dssp TC----EEEEESSSCTHHHHHHHHHTCEEEEECBCTT--SSB--TTCCS---SB----CSSEEEEESSCTTTCCCCCHH-
T ss_pred CC----EEEEcCCChHHHHHHHHHCCCEEEEeeCCCC--CCH--HHHHh---hc----CCCEEEEeCCCCCCCCCcCHH-
Confidence 98 9999999999999999999999999998654 333 33322 11 567889999999999999955
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+|.++|+++|+++|+||+|.+|.. . ...++. .. ..++++++|+||.+ |++|+|+||++ .+++
T Consensus 170 --~l~~l~~~~~~~li~De~~~~~~~--~-~~~~~~---~~------~~~~i~~~s~sK~~-g~~G~r~G~~~---~~~~ 231 (360)
T 3hdo_A 170 --YIDELARRCAGMLVLDETYAEFAE--S-NALELV---RR------HENVVVTRTLSKSY-SLAGMRIGLAI---ARPE 231 (360)
T ss_dssp --HHHHHHHHBSSEEEEECTTGGGSS--C-CCTHHH---HH------CSSEEEEEESTTTT-SCTTSCCEEEE---CCHH
T ss_pred --HHHHHHHHCCCEEEEECChHhhCC--c-chhHHh---cc------CCCEEEEecchHhh-cCCccceeeEe---eCHH
Confidence 556667789999999999998732 1 222222 11 23488899999999 79999999998 7999
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
+++.+...... ++.+.+ ++.++..+++ ..+++++
T Consensus 232 ~~~~~~~~~~~-~~~~~~----------------------------------~~~a~~~~l~-----------~~~~~~~ 265 (360)
T 3hdo_A 232 VIAALDKIRDH-YNLDRL----------------------------------AQAACVAALR-----------DQAYLSE 265 (360)
T ss_dssp HHHHHHHHSCS-CCSCHH----------------------------------HHHHHHHHHH-----------CHHHHHH
T ss_pred HHHHHHHhCCC-CCCCHH----------------------------------HHHHHHHHhc-----------CHHHHHH
Confidence 99999876653 345555 4555444433 1234788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAG 414 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~ 414 (509)
.++.++++++.+.+.|+++ ++.+.++.++ |+|+.+. +. +... +...|.++||.++||..
T Consensus 266 ~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~-~~~~~~~------------~~-~~~~-l~~~l~~~gi~v~~~~~ 324 (360)
T 3hdo_A 266 CCRRIRETREWFTTELRSI-GYDVIPSQGN-YLFATPP------------DR-DGKR-VYDGLYARKVLVRHFSD 324 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCEECCCSSS-EEEEECT------------TC-CHHH-HHHHHHHTTEECBCCCS
T ss_pred HHHHHHHHHHHHHHHHHHC-CCEEcCCCcc-EEEEECC------------CC-CHHH-HHHHHHHCCEEEEECCC
Confidence 8899999999999999998 8887766554 5565553 11 2344 34566778999998764
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=5.2e-33 Score=280.59 Aligned_cols=277 Identities=18% Similarity=0.283 Sum_probs=212.8
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+++++.+.+.. .....|+.. +..++|+++++++++. .+++++|++|+|+++++..+++++ ||
T Consensus 33 ~~~~v~~a~~~~~~~---~~~~~y~~~-~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~~~~~~~---gd---- 98 (335)
T 1uu1_A 33 FPEDLVDEVFRRLNS---DALRIYYDS-PDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIYVMMLMF---DR---- 98 (335)
T ss_dssp CCHHHHHHHHHTCCG---GGGGSCCCS-SCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHHHHHHHS---SE----
T ss_pred CCHHHHHHHHHHhhh---hhhhcCCCC-chHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHHHHHHHh---CC----
Confidence 478999999888754 234458654 6899999999999643 356789999999999999999998 67
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
+|+++ |+|.++...++..|.+++.++.++ +|.+|++.| + ++++|++++||||||.+++.+++.+|++
T Consensus 99 ~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l-----~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~ 165 (335)
T 1uu1_A 99 SVFFP-PTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVNV-----G-----EGDVVFIPNPNNPTGHVFEREEIERILK 165 (335)
T ss_dssp EEECS-SSCHHHHHHHHHHTCEEEECCCCT--TSCCCCCCC-----C-----TTEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred cEEEC-CCcHHHHHHHHHcCCeEEEeccCC--CCCCCHHHc-----C-----CCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99999 999999999999999999998864 367888877 3 6899999999999999999998888888
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~ 265 (509)
+| | ++|+||+|.++... ...+. ... ..++++++|+||.+ |++|+|+||++ .++++++.+.
T Consensus 166 ~~---~-~li~De~~~~~~~~---~~~~~---~~~------~~~~i~~~s~sK~~-g~~G~r~G~~~---~~~~~~~~l~ 225 (335)
T 1uu1_A 166 TG---A-FVALDEAYYEFHGE---SYVDF---LKK------YENLAVIRTFSKAF-SLAAQRVGYVV---ASEKFIDAYN 225 (335)
T ss_dssp TT---C-EEEEECTTHHHHCC---CCGGG---GGT------CSSEEEEEESTTTT-TCGGGCCEEEE---ECHHHHHHHH
T ss_pred hC---C-EEEEECcchhhcch---hHHHH---hhh------CCCEEEEecchhhc-CCcccCeEEEE---eCHHHHHHHH
Confidence 77 7 89999999987532 11111 111 23488899999999 79999999998 6899999988
Q ss_pred HhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHH
Q psy13922 266 KSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLK 345 (509)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (509)
..... ++++.+ .+.++..+++ . .+++++.++.++
T Consensus 226 ~~~~~-~~~~~~----------------------------------~~~~~~~~l~----------~-~~~~~~~~~~~~ 259 (335)
T 1uu1_A 226 RVRLP-FNVSYV----------------------------------SQMFAKVALD----------H-REIFEERTKFIV 259 (335)
T ss_dssp HHSCT-TCSCHH----------------------------------HHHHHHHHHH----------T-HHHHHHHHHHHH
T ss_pred HhcCC-CCcCHH----------------------------------HHHHHHHHhC----------C-HHHHHHHHHHHH
Confidence 76543 355665 4555554443 1 234777888899
Q ss_pred HHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 346 QRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 346 ~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
++++.+.+.|+++ |+.+.++ ++.|+|++++. . +...+. ..|.++||.+.|
T Consensus 260 ~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~-~------------~~~~~~-~~l~~~gi~v~~ 309 (335)
T 1uu1_A 260 EERERMKSALREM-GYRITDS-RGNFVFVFMEK-E------------EKERLL-EHLRTKNVAVRS 309 (335)
T ss_dssp HHHHHHHHHHHHH-TCCBCCC-CSSEEEEECCT-H------------HHHHHH-HHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHC-CcEEcCC-CCeEEEEECCC-C------------CHHHHH-HHHHHCCEEEEE
Confidence 9999999999887 7776544 56678876641 0 133434 444567999987
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=2.1e-31 Score=275.02 Aligned_cols=330 Identities=12% Similarity=0.081 Sum_probs=247.6
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+.+++.+.+..... ....|++..|..++++++++++.+.+|. +++++|+|+++++..+++++.++||
T Consensus 58 ~~~~v~~a~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~~~ggt~a~~~~~~~~~~~gd---- 128 (398)
T 3a2b_A 58 TDTRIIKAAQDALEKYGT-GCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAILFSTGFQSNLGPLSCLMGRND---- 128 (398)
T ss_dssp GCHHHHHHHHHHHHHHCS-CCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEEESSHHHHHHHHHHHSSCTTC----
T ss_pred CCHHHHHHHHHHHHHcCC-CCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEEECCHHHHHHHHHHHHhCCCC----
Confidence 367899999988876322 2334777778888999999999888773 5899999999999999999999888
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
.|+++.|+|..+...++..|.+++.++. +|++.|++.+++... .++++|++++|+||||.+++ +++|++
T Consensus 129 ~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~-~~~~~v~~~~~~nptG~~~~---~~~l~~ 197 (398)
T 3a2b_A 129 YILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPE-DSAKLICTDGIFSMEGDIVN---LPELTS 197 (398)
T ss_dssp EEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCS-SSCEEEEEESBCTTTCCBCC---HHHHHH
T ss_pred EEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhcc-CCceEEEEeCCCCCCCCccC---HHHHHH
Confidence 9999999999999999999999999875 489999999876311 15889999999999999988 899999
Q ss_pred HHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCce-eEEEEecccccCCCCCCeeEEEeeecCCHHHHHHH
Q psy13922 186 FAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSME-LASFMSCSKGYMGECGLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 186 ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l 264 (509)
+|+++|+++|+||+|+.+.++. ...++.+.. +. ..+ +++++|+||.+ |++| ||++ .++++++.+
T Consensus 198 ~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~-~~-----~~~~di~~~s~sK~~-~~~G---G~~~---~~~~~~~~l 262 (398)
T 3a2b_A 198 IANEFDAAVMVDDAHSLGVIGH--KGAGTASHF-GL-----NDDVDLIMGTFSKSL-ASLG---GFVA---GDADVIDFL 262 (398)
T ss_dssp HHHHHTCEEEEECTTTTTTSSG--GGCCHHHHH-TC-----GGGCSEEEEESSSTT-CSSC---EEEE---ECHHHHHHH
T ss_pred HHHHcCcEEEEECCCcccccCC--CCCchHhhc-CC-----CcCCeEEEecccccc-cCCC---cEEE---eCHHHHHHH
Confidence 9999999999999999887632 123333321 11 112 47788999999 6778 9998 689999988
Q ss_pred HHhh-h-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccc-hhhcccCCCCCCCCchHHHHHHHHHHH
Q psy13922 265 HKSI-S-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQT-VMDCVVNPPQPGEPSYEQFSREKQSVL 341 (509)
Q Consensus 265 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-al~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (509)
.... . ...+.+.+ .+. ++..+++ . .++.++++
T Consensus 263 ~~~~~~~~~~~~~~~----------------------------------~~~a~~~~~l~----------~-~~~~~~~~ 297 (398)
T 3a2b_A 263 KHNARSVMFSASMTP----------------------------------ASVASTLKALE----------I-IQNEPEHI 297 (398)
T ss_dssp HHHCHHHHSSBCCCH----------------------------------HHHHHHHHHHH----------H-HHHCTHHH
T ss_pred HHhcccceecCCCCH----------------------------------HHHHHHHHHHH----------H-HhhCHHHH
Confidence 7742 2 22233333 222 2222221 1 23356788
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCc
Q psy13922 342 DSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGT 421 (509)
Q Consensus 342 ~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~ 421 (509)
+.++++++.+.+.|+++ |+++.++. ++++|+.++... +...+...+++ +||.+.||..|..+
T Consensus 298 ~~~~~~~~~l~~~L~~~-g~~~~~~~-g~~~~~~~~~~~------------~~~~l~~~l~~-~gi~v~~~~~~~~~--- 359 (398)
T 3a2b_A 298 EKLWKNTDYAKAQLLDH-GFDLGATE-SPILPIFIRSNE------------KTFWVTKMLQD-DGVFVNPVVSPAVP--- 359 (398)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCBCSCC-SSEEEEECCCHH------------HHHHHHHHHHH-TTEECEEECTTTSC---
T ss_pred HHHHHHHHHHHHHHHhc-CCCcCCCC-CCEEEEEcCCHH------------HHHHHHHHHHH-CCcEEEeeCCCCCC---
Confidence 89999999999999998 88877666 567787664111 13344445554 59999999887651
Q ss_pred cccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHH
Q psy13922 422 YHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFRE 499 (509)
Q Consensus 422 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~ 499 (509)
.+.+ ++|++++ ++++++++++++|++
T Consensus 360 --------------------------------------------~~~~--------~iRis~~~~~~~e~i~~~~~~l~~ 387 (398)
T 3a2b_A 360 --------------------------------------------AEES--------LIRFSLMATHTYDQIDEAIEKMVK 387 (398)
T ss_dssp --------------------------------------------GGGC--------EEEEECCTTCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------CCCc--------eEEEEEeCCCCHHHHHHHHHHHHH
Confidence 1122 8999999 599999999999999
Q ss_pred HHHHHH
Q psy13922 500 FHEEFL 505 (509)
Q Consensus 500 ~~~~~~ 505 (509)
+++++.
T Consensus 388 ~l~~~~ 393 (398)
T 3a2b_A 388 VFKQAE 393 (398)
T ss_dssp HHHHCC
T ss_pred HHHHhC
Confidence 987643
No 83
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.7e-31 Score=268.79 Aligned_cols=342 Identities=14% Similarity=0.119 Sum_probs=248.7
Q ss_pred HHHHHHHhhcCCCCC---CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeC
Q psy13922 7 LSLQVLALVSLPQLF---DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSA 83 (509)
Q Consensus 7 ~~~~~~~~~~~~~~~---~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~ 83 (509)
.+|+.+......-++ +++.+|+.+++++.+.+. .+|++. ..++++++++++.+.+|.+ +++++++|+
T Consensus 9 ~~r~~f~~~~~~~~l~~~~~~~~~~~v~~a~~~~~~-------~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~ 78 (386)
T 2dr1_A 9 AFKEVYEMVKPKYKLFTAGPVACFPEVLEIMKVQMF-------SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPS 78 (386)
T ss_dssp HHHHHHHHHSCCSEECCSSSCCCCHHHHHHTTSCCC-------CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESS
T ss_pred HHHHHHhhcCccceeecCCCcCCcHHHHHHHhcccc-------cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeC
Confidence 566666654433333 344567777777654432 136542 3778888888888888865 467899999
Q ss_pred CHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceE
Q psy13922 84 GASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRA 161 (509)
Q Consensus 84 G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ 161 (509)
|+++++..++++++++|| .|+++.|+|.+ +...++..|++++.++.++ ++.+|++.|++.+++. +++++
T Consensus 79 g~t~a~~~~~~~l~~~gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~---~~~~~ 149 (386)
T 2dr1_A 79 SGTGIMEASIRNGVSKGG----KVLVTIIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKN---PDVEA 149 (386)
T ss_dssp CHHHHHHHHHHHHSCTTC----EEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHC---TTCCE
T ss_pred ChHHHHHHHHHHhhcCCC----eEEEEcCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcC---CCCcE
Confidence 999999999999988888 99999999998 8888899999999999875 3578999999999641 16899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 162 IVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 162 ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.+. .++.. ....++++|+||.+
T Consensus 150 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~-----~~~~~----------~~~di~~~s~sK~~- 210 (386)
T 2dr1_A 150 VTITYNETSTGVLNP---LPELAKVAKEHDKLVFVDAVSAMGGAD-----IKFDK----------WGLDVVFSSSQKAF- 210 (386)
T ss_dssp EEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTBTTBC-----CCTTT----------TTCSEEEEETTSTT-
T ss_pred EEEEeecCCcchhCC---HHHHHHHHHHcCCeEEEEccccccCcc-----ccccc----------cCCcEEEEeccccc-
Confidence 999999999999987 899999999999999999999876432 11111 11256788999999
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHH----------------hh---hcccCcchhhhhccccccCCCCCchhHHHHHHHh
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHK----------------SI---SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAV 302 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~----------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (509)
|.+ .++||++ .++++++.+.. .. ...++++..
T Consensus 211 ~~~-~g~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 261 (386)
T 2dr1_A 211 GVP-PGLAIGA---FSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMP------------------------- 261 (386)
T ss_dssp CCC-SSCEEEE---ECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHH-------------------------
T ss_pred cCC-CceEEEE---ECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHH-------------------------
Confidence 544 2489998 67888877632 10 111223333
Q ss_pred hhcccCcccccchhhcccCCCCCCCCchHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCCeeccCC---ceeEEeecCC
Q psy13922 303 LDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE--KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ---GAMYAFPQMK 377 (509)
Q Consensus 303 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~g~~~~~~~~ 377 (509)
.+.++..+++ .+.++ ++++++.++++++.+.+.|+++ |+++..+. .+.++|++++
T Consensus 262 ---------~~~a~~~~l~----------~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 321 (386)
T 2dr1_A 262 ---------QVFGINVALR----------IIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLTP 321 (386)
T ss_dssp ---------HHHHHHHHHH----------HHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEECC
T ss_pred ---------HHHHHHHHHH----------HHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEcC
Confidence 4444443322 22222 6788899999999999999998 88877664 3667776654
Q ss_pred CCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhh
Q psy13922 378 LPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESL 457 (509)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (509)
. +. +...+...+++ +||.+.||..+..
T Consensus 322 --~---------~~-~~~~~~~~l~~-~gi~v~~~~~~~~---------------------------------------- 348 (386)
T 2dr1_A 322 --P---------GI-KGDEVYEAMRK-RGFELAKGYGSVK---------------------------------------- 348 (386)
T ss_dssp --T---------TC-CHHHHHHHHHH-TTEECEECCGGGT----------------------------------------
T ss_pred --C---------CC-CHHHHHHHHHH-CCeEEecCccccC----------------------------------------
Confidence 1 21 24444455554 5999999874322
Q ss_pred hcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHHHHHHh
Q psy13922 458 ERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
.+ ++|+++. ++++++++++++|+++++++..
T Consensus 349 --------~~----------~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 349 --------EK----------TFRIGHMGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp --------TT----------EEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------CC----------EEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 22 8999999 7999999999999999987643
No 84
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.98 E-value=5.4e-31 Score=271.16 Aligned_cols=320 Identities=11% Similarity=0.089 Sum_probs=235.7
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
+...|+.+++++.+.+.. .|++. ..++++++++++.+.+|. +++ +|++|+|+++++..++++++++||
T Consensus 42 ~~~~~~~v~~a~~~~~~~-------~~~~~--~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~gd 110 (393)
T 1vjo_A 42 PSNAHPSVLQAMNVSPVG-------HLDPA--FLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPGD 110 (393)
T ss_dssp CCCCCHHHHHHHSSCCCC-------TTSHH--HHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTTC
T ss_pred CCCCCHHHHHHHhccccc-------ccCHH--HHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCCC
Confidence 344577887777554432 36542 467888888888888774 567 899999999999999999998888
Q ss_pred CCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 102 GKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
.|+++.|+|.+ +...++..|++++.++.+++ +.+|++.|++.+++. ++++|++++|+||||.+++
T Consensus 111 ----~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~--- 177 (393)
T 1vjo_A 111 ----VVLIGVAGYFGNRLVDMAGRYGADVRTISKPWG--EVFSLEELRTALETH----RPAILALVHAETSTGARQP--- 177 (393)
T ss_dssp ----EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECC---
T ss_pred ----EEEEEcCChhHHHHHHHHHHcCCceEEEecCCC--CCCCHHHHHHHHhhC----CceEEEEeccCCCcceecc---
Confidence 99999999999 88989999999999998753 578999999999864 5899999999999999987
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|+++|+++|+++|+||+|.. . . ....+. . ....+++.|+||.+ |.+| |+||++ .+++
T Consensus 178 l~~i~~l~~~~~~~li~Dea~~~-g---~-~~~~~~----~------~~~di~~~s~sK~l-~~~~-~~G~l~---~~~~ 237 (393)
T 1vjo_A 178 LEGVGELCREFGTLLLVDTVTSL-G---G-VPIFLD----A------WGVDLAYSCSQKGL-GCSP-GASPFT---MSSR 237 (393)
T ss_dssp CTTHHHHHHHHTCEEEEECTTTT-T---T-SCCCTT----T------TTCSEEECCSSSTT-CSCS-SCEEEE---ECHH
T ss_pred HHHHHHHHHHcCCEEEEECCccc-c---C-cCCccc----c------cCccEEEEcCcccc-cCCC-ceEEEE---ECHH
Confidence 88999999999999999999983 2 1 111111 1 11256677999999 5677 999998 6888
Q ss_pred HHHHHHHhhh---cc-----------------c-CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhc
Q psy13922 260 VKAMLHKSIS---AM-----------------L-CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDC 318 (509)
Q Consensus 260 ~~~~l~~~~~---~~-----------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 318 (509)
+++.+..... .+ . +++.+ .+.++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----------------------------------~~~a~~~ 283 (393)
T 1vjo_A 238 AIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPIN----------------------------------LYYALRE 283 (393)
T ss_dssp HHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHH----------------------------------HHHHHHH
T ss_pred HHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHH----------------------------------HHHHHHH
Confidence 8887754210 00 0 22222 4444444
Q ss_pred ccCCCCCCCCchHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCc---eeEEeecCCCCHHHHHHHhhcCCCCc
Q psy13922 319 VVNPPQPGEPSYEQF-SREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQG---AMYAFPQMKLPAKAIAKAKAEGKCPS 394 (509)
Q Consensus 319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~g~~~~ 394 (509)
+++ .. ..+++++++.++++++++.+.|+++ ++++..+.+ +.++++.++ . +. +.
T Consensus 284 al~----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~---------~~-~~ 340 (393)
T 1vjo_A 284 ALR----------LIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTVCIP--D---------GV-DG 340 (393)
T ss_dssp HHH----------HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECC--T---------TC-CH
T ss_pred HHH----------HHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEEEcC--C---------CC-CH
Confidence 432 11 1236788899999999999999998 888877664 234554442 1 21 24
Q ss_pred HHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCC
Q psy13922 395 VLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVP 474 (509)
Q Consensus 395 ~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (509)
..+...+++++||.+.||..|.. ++
T Consensus 341 ~~~~~~l~~~~gi~v~~g~~~~~------------------------------------------------~~------- 365 (393)
T 1vjo_A 341 KAVARRLLNEHNIEVGGGLGELA------------------------------------------------GK------- 365 (393)
T ss_dssp HHHHHHHHHHHCEECEECCGGGT------------------------------------------------TT-------
T ss_pred HHHHHHHHhhCCEEEecCccccC------------------------------------------------CC-------
Confidence 45555555556999999886543 33
Q ss_pred CceeEEEEe-e--cChHHHHHHHHHHHHHH
Q psy13922 475 GTYHFRTTI-L--PQPEKLKAMLEKFREFH 501 (509)
Q Consensus 475 ~~~~~Rls~-~--~~~~~i~~~~~~l~~~~ 501 (509)
++|+++ . .+++++++++++|++++
T Consensus 366 ---~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 366 ---VWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ---EEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred ---EEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 899994 3 56778999999999876
No 85
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.97 E-value=2.6e-30 Score=266.46 Aligned_cols=376 Identities=13% Similarity=0.116 Sum_probs=252.4
Q ss_pred CchHHHHHHHHhhcC----CCC--C---CCCCCCHHHHHHHHHHHhcccCCC-----cccCCCCcchHHHHHHHHHHHhh
Q psy13922 3 PVFSLSLQVLALVSL----PQL--F---DDPRFPDDVKQRAQAVLDGCRGQS-----VGSYTDSPGIEIIRRHVAQYISR 68 (509)
Q Consensus 3 ~~~~~~~~~~~~~~~----~~~--~---~~~~~p~~v~~a~~~~l~~~~~~~-----~~~Y~~~~g~~~lr~~va~~l~~ 68 (509)
-+++.+|+.+..... +.+ + ..+..|+.+++++.+.+....... ...|.+..+..++|++++++++
T Consensus 3 ~~~~~~r~~f~~~~~~~~g~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~- 81 (406)
T 1kmj_A 3 FSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN- 81 (406)
T ss_dssp CCHHHHHHTCGGGGCEETTEECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCHHHHHHhCcccccccCCCceEEecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC-
Confidence 355678877776542 112 2 223468899999999998732111 1113456678899999999883
Q ss_pred hcCCCCCCCcEEEeCCHHHHHHHHHHHh----hcCCCCCCCeEEEcCCCChhH----HHHHHhcCCEEEEEecCCCCCCC
Q psy13922 69 RDGQPADWQDVILSAGASDGIKSVLKLL----IEDVDGKKPGVLIPIPQYPLY----SASLAEFNMEQIGYYLDESKQWG 140 (509)
Q Consensus 69 ~~g~~~~~~~i~~t~G~~~al~~~~~~l----~~~gd~~~~~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~ 140 (509)
.. ++++|++|+|+++++..+++++ .++|| .|+++.|+|++. ...++..|++++.++.+++ +.
T Consensus 82 ---~~-~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd----~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~ 151 (406)
T 1kmj_A 82 ---AR-SAEELVFVRGTTEGINLVANSWGNSNVRAGD----NIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD--GT 151 (406)
T ss_dssp ---CS-CGGGEEEESSHHHHHHHHHHHTHHHHCCTTC----EEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT--SC
T ss_pred ---CC-CCCeEEEeCChhHHHHHHHHHhhhhcCCCCC----EEEEecccchHHHHHHHHHHHhCCCEEEEEecCCC--CC
Confidence 11 4689999999999999999999 77888 999999998764 3456778999999998753 57
Q ss_pred CCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHH
Q psy13922 141 LPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVE 220 (509)
Q Consensus 141 ~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~ 220 (509)
+|++.|++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+.. ..++...
T Consensus 152 ~d~~~l~~~l~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~-----~~~~~~~--- 215 (406)
T 1kmj_A 152 LQLETLPTLFDE-----KTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH-----PVDVQAL--- 215 (406)
T ss_dssp BCGGGHHHHCCT-----TEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHH---
T ss_pred cCHHHHHHHhcc-----CCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC-----CCccccc---
Confidence 899999999876 7999999999999999999 89999999999999999999986432 1223221
Q ss_pred hCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHH
Q psy13922 221 MGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQ 300 (509)
Q Consensus 221 ~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (509)
+ ..+++.|+||.+ |++| +||++ .++++++.+......+.......... ...+....
T Consensus 216 -~------~d~~~~s~~K~~-g~~G--~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------- 271 (406)
T 1kmj_A 216 -D------CDFYVFSGHKLY-GPTG--IGILY---VKEALLQEMPPWEGGGSMIATVSLSE-GTTWTKAP---------- 271 (406)
T ss_dssp -T------CSEEEEEGGGTT-SCTT--CEEEE---ECHHHHHHCCCSSCSTTSEEEEETTT-EEEECCTT----------
T ss_pred -C------CCEEEEEchhcc-CCCC--cEEEE---EeHHHHhhcCCcccCCCceeeccccc-ccccCCCc----------
Confidence 1 156678999999 7888 79998 68888887754332111000000000 00000000
Q ss_pred HhhhcccCcccccchhhcccCCCCCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC--CceeEEeecCC
Q psy13922 301 AVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFS-REKQSVLDSLKQRAKMVADTFNSIEGMSCNPV--QGAMYAFPQMK 377 (509)
Q Consensus 301 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~~g~~~~~~~~ 377 (509)
..+..++......+++..+++ ... .+++++++.++++++++.+.|+++|++++..+ .++++.| .++
T Consensus 272 ~~~~~~~~~~~~~~a~~~al~----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~~ 340 (406)
T 1kmj_A 272 WRFEAGTPNTGGIIGLGAALE----------YVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAF-NLG 340 (406)
T ss_dssp GGGCCSSCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEE-EET
T ss_pred hhccCCCCCHHHHHHHHHHHH----------HHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEE-EEC
Confidence 000001111011222212211 111 13667888999999999999999888888877 7887776 343
Q ss_pred CCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhh
Q psy13922 378 LPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESL 457 (509)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (509)
+. +..++ .+.|.++||.++||..|... ..
T Consensus 341 ------------~~-~~~~~-~~~l~~~gi~v~~g~~~~~~-------------------------------~~------ 369 (406)
T 1kmj_A 341 ------------KH-HAYDV-GSFLDNYGIAVRTGHHCAMP-------------------------------LM------ 369 (406)
T ss_dssp ------------TC-CHHHH-HHHHHHTTEECEEECTTCHH-------------------------------HH------
T ss_pred ------------CC-CHHHH-HHHHhhCCcEEEeccccchH-------------------------------HH------
Confidence 11 23343 46777889999998866531 00
Q ss_pred hcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHHHHH
Q psy13922 458 ERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~~ 504 (509)
+.. ...+ ++|+++. +++++++++++.|+++++.+
T Consensus 370 ~~~-----g~~~--------~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 370 AYY-----NVPA--------MCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp HHT-----TCSC--------EEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred Hhc-----CCCC--------eEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 000 0112 8999999 49999999999999988754
No 86
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.97 E-value=7.3e-30 Score=264.51 Aligned_cols=353 Identities=12% Similarity=0.140 Sum_probs=242.0
Q ss_pred CCCHHHHHHHHHHHhcccCC---CcccCCC--CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh---
Q psy13922 25 RFPDDVKQRAQAVLDGCRGQ---SVGSYTD--SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL--- 96 (509)
Q Consensus 25 ~~p~~v~~a~~~~l~~~~~~---~~~~Y~~--~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l--- 96 (509)
..|+.+++++.+.+...... ....|++ ..+..+++++++++++. . ++++|++|+|+++++..+++++
T Consensus 39 ~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~----~-~~~~v~~~~g~t~a~~~~~~~~~~~ 113 (420)
T 1t3i_A 39 QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINA----R-SPREIVYTRNATEAINLVAYSWGMN 113 (420)
T ss_dssp CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTC----S-CGGGEEEESSHHHHHHHHHHHTHHH
T ss_pred CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCC----C-CCCeEEEcCChHHHHHHHHHHhhhc
Confidence 56889999999998763211 1233654 46788999999999842 1 5689999999999999999999
Q ss_pred -hcCCCCCCCeEEEcCCCChh----HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC
Q psy13922 97 -IEDVDGKKPGVLIPIPQYPL----YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPT 171 (509)
Q Consensus 97 -~~~gd~~~~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt 171 (509)
.++|| .|+++.|+|.+ +...++..|.+++.++.++ ++.+|++.|++.+++ ++++|++++|+|||
T Consensus 114 ~~~~gd----~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~-----~~~~v~~~~~~npt 182 (420)
T 1t3i_A 114 NLKAGD----EIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE--QESFDLEHFKTLLSE-----KTKLVTVVHISNTL 182 (420)
T ss_dssp HCCTTC----EEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT--TSSBCHHHHHHHCCT-----TEEEEEEESBCTTT
T ss_pred ccCCCC----EEEECcchhHHHHHHHHHHHHhcCcEEEEeccCC--CCCcCHHHHHHhhCC-----CceEEEEeCCcccc
Confidence 77887 99999999998 5666778899999999874 457899999999876 79999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 172 GQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 172 G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
|.+++ +++|.++|+++|+++|+|++|+.+.. ..++... + ..+++.|+||.+ |.+| +||+
T Consensus 183 G~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~----~------~di~~~s~sK~~-~~~g--~G~~ 241 (420)
T 1t3i_A 183 GCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY-----PLDVQLI----D------CDWLVASGHKMC-APTG--IGFL 241 (420)
T ss_dssp CBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHH----T------CSEEEEEGGGTT-SCTT--CEEE
T ss_pred cCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc-----cCchhhc----C------CCEEEEehhhhc-CCCc--eEEE
Confidence 99999 89999999999999999999986432 1233322 1 146678999988 6777 8999
Q ss_pred eeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 252 EVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
+ .++++++.+......+........ ....+ .... ..+..+........++..+++
T Consensus 242 ~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~----------~~~~~~~~~~~~~~a~~~al~---------- 296 (420)
T 1t3i_A 242 Y---GKEEILEAMPPFFGGGEMIAEVFF-DHFTT-GELP----------HKFEAGTPAIAEAIALGAAVD---------- 296 (420)
T ss_dssp E---ECHHHHHHSCCCSCSTTSEEEECS-SCEEE-CCTT----------GGGCCSSCCHHHHHHHHHHHH----------
T ss_pred E---EchHHHhhcCceecCCCccccccc-cccCC-CCch----------hhccCCCccHHHHHHHHHHHH----------
Confidence 8 688888877544321110000000 00000 0000 000000000001222221111
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC------ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhh
Q psy13922 332 QFS-REKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ------GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLER 404 (509)
Q Consensus 332 ~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~ 404 (509)
... .+++++++.++++++.+.+.|+++|++++..+. ++++.| .++ +. +..+ +.+.|.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~-~~~------------~~-~~~~-~~~~l~~ 361 (420)
T 1t3i_A 297 YLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASF-NVA------------GL-HASD-VATMVDQ 361 (420)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEE-EET------------TB-CHHH-HHHHHHT
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEE-EEC------------CC-CHHH-HHHHHHH
Confidence 111 125778889999999999999998888887654 666655 343 11 2333 3567788
Q ss_pred cCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCC-CCCCCCCCceeEEEEe
Q psy13922 405 TGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPG-AGFGQVPGTYHFRTTI 483 (509)
Q Consensus 405 ~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Rls~ 483 (509)
+||.+.||..|... .. .. .+ .+ ++|+++
T Consensus 362 ~gi~v~~~~~~~~~-------------------------------~~------~~------~g~~~--------~iRis~ 390 (420)
T 1t3i_A 362 DGIAIRSGHHCTQP-------------------------------LH------RL------FDASG--------SARASL 390 (420)
T ss_dssp TTEECBCSCTTCHH-------------------------------HH------HH------TTCCC--------CEEEEC
T ss_pred CCeEEeeccccchH-------------------------------HH------Hh------cCCCC--------eEEEec
Confidence 89999998766430 00 00 11 22 899999
Q ss_pred e--cChHHHHHHHHHHHHHHHHHH
Q psy13922 484 L--PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 484 ~--~~~~~i~~~~~~l~~~~~~~~ 505 (509)
. +++++++.++++|++++++++
T Consensus 391 ~~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 391 YFYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9 599999999999999987653
No 87
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.97 E-value=3.7e-30 Score=263.38 Aligned_cols=344 Identities=14% Similarity=0.120 Sum_probs=231.1
Q ss_pred CCCCHHHHHHHHHHHhccc--CCC--cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh--
Q psy13922 24 PRFPDDVKQRAQAVLDGCR--GQS--VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-- 97 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~--~~~--~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-- 97 (509)
+..|+.+++++.+.+...- +.. ...|.+..+..++++.+++++ | +++++|++|+|+++++..+++++.
T Consensus 11 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a~~~~~~~~~~~ 84 (384)
T 1eg5_A 11 TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL----G--VSPSEIFFTSCATESINWILKTVAET 84 (384)
T ss_dssp CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH----T--SCGGGEEEESCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc----C--CCCCeEEEECCHHHHHHHHHHhhhhh
Confidence 4668999999999987621 111 112445567789999999998 3 567899999999999999999998
Q ss_pred --cCCCCCCCeEEEcCCCChhHHHHH---HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 98 --EDVDGKKPGVLIPIPQYPLYSASL---AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 98 --~~gd~~~~~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
++|| .|+++.|+|.++...+ +..|.+++.++.+++ +.+|++.|++.+++ ++++|++++|+||||
T Consensus 85 ~~~~gd----~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~-----~~~~v~~~~~~nptG 153 (384)
T 1eg5_A 85 FEKRKR----TIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSR--GVVKLEELEKLVDE-----DTFLVSIMAANNEVG 153 (384)
T ss_dssp TTTTCC----EEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTT--SCBCHHHHHHHCCT-----TEEEEEEESBCTTTC
T ss_pred ccCCCC----EEEECCCCchHHHHHHHHHHhcCCEEEEEccCCC--CccCHHHHHHHhCC-----CCeEEEEECCCCCcc
Confidence 6887 9999999999887665 678999999998753 57899999999876 799999999999999
Q ss_pred CCCCHHHHHHHHHHHHHCC--cEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 173 QVLTKENIQDIIKFAHREK--LFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~--i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
.+++ +++|.++|+++| ++||+||+|+.. . ...++. +. ...+++.|+||.+ |++| +||
T Consensus 154 ~~~~---~~~i~~l~~~~~~~~~li~Dea~~~~----~-~~~~~~----~~------~~di~~~s~sK~~-g~~G--~G~ 212 (384)
T 1eg5_A 154 TIQP---VEDVTRIVKKKNKETLVHVDAVQTIG----K-IPFSLE----KL------EVDYASFSAHKFH-GPKG--VGI 212 (384)
T ss_dssp BBCC---HHHHHHHHHHHCTTCEEEEECTTTTT----T-SCCCCT----TT------CCSEEEEEGGGGT-SCTT--CEE
T ss_pred cccC---HHHHHHHHHhcCCceEEEEEhhhhcC----C-cccCch----hc------CCCEEEecHHHhc-CCCc--eEE
Confidence 9999 788999999999 999999999731 1 111111 11 1256677999999 7888 799
Q ss_pred EeeecCCHHH--HHHHHHhh----hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCC
Q psy13922 251 SEVINLDPGV--KAMLHKSI----SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQ 324 (509)
Q Consensus 251 v~~~~~~~~~--~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 324 (509)
++ .++++ ...+.... ...++++.+ .+.++..+++
T Consensus 213 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~al~--- 252 (384)
T 1eg5_A 213 TY---IRKGVPIRPLIHGGGQERGLRSGTQNVP----------------------------------GIVGAARAME--- 252 (384)
T ss_dssp EE---ECTTSCCCCSBCSSCTTTTTBCSCCCHH----------------------------------HHHHHHHHHH---
T ss_pred EE---EcCCCccccccccCcccccccCCCCChH----------------------------------HHHHHHHHHH---
Confidence 98 45543 11111000 011223333 3444433322
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC-c--eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHH
Q psy13922 325 PGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ-G--AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFEL 401 (509)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~--g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 401 (509)
...++++++++.++++++.+.+.|++ +++++..+. + +.++++.+. +. +...+ .+.
T Consensus 253 -------~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~-~~~ 310 (384)
T 1eg5_A 253 -------IAVEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFP------------NI-RGSTL-QNL 310 (384)
T ss_dssp -------HHHHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECT------------TC-CHHHH-HHH
T ss_pred -------HHHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeC------------CC-CHHHH-HHH
Confidence 22345788899999999999999998 488876542 2 234444332 11 23443 455
Q ss_pred HhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEE
Q psy13922 402 LERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRT 481 (509)
Q Consensus 402 l~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rl 481 (509)
|.++||.+.||..|+.... .| ...++..|. +. ..+..++||
T Consensus 311 l~~~gi~v~~g~~~~~~~~--------------------------~~-----~~~~~~~g~---~~-----~~~~~~iRi 351 (384)
T 1eg5_A 311 LSGYGIYVSTSSACTSKDE--------------------------RL-----RHVLDAMGV---DR-----RIAQGAIRI 351 (384)
T ss_dssp HHHTTEECBC-------------------------------------------CHHHHTTC---CH-----HHHHHEEEE
T ss_pred HhhCCeEEeccccccCCCC--------------------------cc-----hHHHHHcCC---Ch-----hhcCCeEEE
Confidence 6788999999987765100 00 000000000 00 001228999
Q ss_pred Eee--cChHHHHHHHHHHHHHHHHHHh
Q psy13922 482 TIL--PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 482 s~~--~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
+++ ++++++++++++|+++++++++
T Consensus 352 ~~~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 352 SLCKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999 7999999999999999877543
No 88
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.97 E-value=3e-29 Score=255.96 Aligned_cols=347 Identities=12% Similarity=0.068 Sum_probs=224.5
Q ss_pred CCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh----cC
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI----ED 99 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~----~~ 99 (509)
...|+.+++++.+.+.+........|....+..++.+.+.+.+.+.+| +++++|++|+|+++++..+++++. ++
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~ 87 (382)
T 4hvk_A 10 KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVN--GGGGTVVFTSGATEANNLAIIGYAMRNARK 87 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTT--CTTEEEEEESSHHHHHHHHHHHHHHHHGGG
T ss_pred CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcC--CCcCeEEEECCchHHHHHHHHHhhhhhcCC
Confidence 345889999999998773221111232222333444444444444445 457789999999999999999998 88
Q ss_pred CCCCCCeEEEcCCCChhHHHHHHh---cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 100 VDGKKPGVLIPIPQYPLYSASLAE---FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
|| .|+++.|+|.++...+.. .|++++.++.+++ +.+|++.|++.+++ ++++|++++|+||||.+++
T Consensus 88 gd----~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~-----~~~~v~~~~~~nptG~~~~ 156 (382)
T 4hvk_A 88 GK----HILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKY--GEVDVSFIDQKLRD-----DTILVSVQHANNEIGTIQP 156 (382)
T ss_dssp CC----EEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTT--SCBCHHHHHHHCCT-----TEEEEECCSBCTTTCBBCC
T ss_pred CC----EEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCC--CCcCHHHHHHHhcc-----CceEEEEECCCCCceeeCC
Confidence 88 999999999998776554 5999999998754 47899999999976 7899999999999999988
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
+++|.++|+++|+ +|+|++|..... ..++... + ..+++.|+||.+ |.+|+++.++ .
T Consensus 157 ---~~~i~~l~~~~~~-li~D~a~~~~~~-----~~~~~~~----~------~d~~~~s~~K~~-g~~g~g~~~~----~ 212 (382)
T 4hvk_A 157 ---VEEISEVLAGKAA-LHIDATASVGQI-----EVDVEKI----G------ADMLTISSNDIY-GPKGVGALWI----R 212 (382)
T ss_dssp ---HHHHHHHHSSSSE-EEEECTTTBTTB-----CCCHHHH----T------CSEEEEESGGGT-SCTTCEEEEE----E
T ss_pred ---HHHHHHHHHHcCE-EEEEhHHhcCCC-----CCCchhc----C------CCEEEEeHHHhc-CCCceEEEEE----c
Confidence 7889999999999 999999875221 1222221 1 146677999988 6677544443 2
Q ss_pred CHHHHHHHHHhhhc--------ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC
Q psy13922 257 DPGVKAMLHKSISA--------MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 257 ~~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 328 (509)
++. .+...... ...++.. .+.++..++
T Consensus 213 ~~~---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~al-------- 247 (382)
T 4hvk_A 213 KEA---KLQPVILGGGQENGLRSGSENVP----------------------------------SIVGFGKAA-------- 247 (382)
T ss_dssp TTC---CCCCSSCSSCTGGGTSCSCCCHH----------------------------------HHHHHHHHH--------
T ss_pred Ccc---CcCcccccCCCcCccccCCcCHH----------------------------------HHHHHHHHH--------
Confidence 222 11111100 1111112 233333222
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCc---eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhc
Q psy13922 329 SYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQG---AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERT 405 (509)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~ 405 (509)
....++++++++.++++++.+.+.|+++|++.+..+.+ +.++++.+. +. +... +...|.++
T Consensus 248 --~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~-~~~~l~~~ 311 (382)
T 4hvk_A 248 --EITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS------------YI-EGES-IVLSLDMA 311 (382)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET------------TC-CHHH-HHHHHHHT
T ss_pred --HHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC------------CC-CHHH-HHHHHHHC
Confidence 22234578899999999999999999998888776543 223443333 21 2334 35666778
Q ss_pred CeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-
Q psy13922 406 GICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL- 484 (509)
Q Consensus 406 gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~- 484 (509)
||.+.+|..|..... .|. ..+...|.......+ ++|+++.
T Consensus 312 gi~v~~g~~~~~~~~--------------------------~~~-----~~~~~~g~~~~~~~~--------~iRl~~~~ 352 (382)
T 4hvk_A 312 GIQASTGSACSSKTL--------------------------QPS-----HVLMACGLKHEEAHG--------TLLLTLGR 352 (382)
T ss_dssp TCBCBCC----------------------------------CCC-----HHHHHTTCCHHHHHT--------EEEEECCT
T ss_pred CEEEeeCCccCCCCC--------------------------cch-----HHHHHcCCChhhcCC--------eEEEEcCC
Confidence 999999988776210 000 000000000000012 8999999
Q ss_pred -cChHHHHHHHHHHHHHHHHHHhh
Q psy13922 485 -PQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 485 -~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
++++++++++++|+++++++++.
T Consensus 353 ~~t~e~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 353 YNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 68999999999999999887654
No 89
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.97 E-value=1.3e-28 Score=253.65 Aligned_cols=329 Identities=12% Similarity=0.104 Sum_probs=234.1
Q ss_pred CHHHHHHHHHHHhcccCCC-c--ccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQS-V--GSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~-~--~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
|+.+.+++.+.+....... . ..|+...+..++++.++++++ .++.|++++| ++++..++.+++++||
T Consensus 59 ~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~sG-t~a~~~~l~~~~~~gd-- 128 (399)
T 3tqx_A 59 HPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG-------TDDTILYSSC-FDANGGLFETLLGPED-- 128 (399)
T ss_dssp CHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT-------CSEEEEESCH-HHHHHTTHHHHCCTTC--
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC-------CCcEEEECch-HHHHHHHHHHhcCCCC--
Confidence 6899999998887732111 1 114455567889999998883 1245555555 7899999999999988
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
.|+++.|+|..+...++..|.+++.++. .|++.|++.+++.... .++++|++++|+||||.+++ +++
T Consensus 129 --~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---l~~ 196 (399)
T 3tqx_A 129 --AIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD---LKS 196 (399)
T ss_dssp --EEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC---HHH
T ss_pred --EEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC---HHH
Confidence 9999999999999999999999999875 3678999988864321 26899999999999999999 899
Q ss_pred HHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHH
Q psy13922 183 IIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKA 262 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~ 262 (509)
|+++|+++|+++|+||+|+...++. ...+..+.. ++. ....++++|+||.+ | |+++||++ .++++++
T Consensus 197 i~~l~~~~~~~li~De~~~~~~~~~--~~~~~~~~~-~~~----~~~di~~~s~sK~~-~--g~~gG~~~---~~~~~~~ 263 (399)
T 3tqx_A 197 ICDLADKYNALVMVDDSHAVGFIGE--NGRGTPEYC-GVA----DRVDILTGTLGKAL-G--GASGGYTS---GHKEIIE 263 (399)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTSST--TSCCHHHHH-TCT----TCCSEEEEESSSSS-C--SSCCEEEE---ECHHHHH
T ss_pred HHHHHHHcCCEEEEECCccccccCC--CCCchHHhh-CCC----CCCcEEEecchHhc-c--cCceEEEE---cCHHHHH
Confidence 9999999999999999996433322 222333321 110 11257788999999 5 45669998 7999999
Q ss_pred HHHHhhhcc---cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHH
Q psy13922 263 MLHKSISAM---LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQS 339 (509)
Q Consensus 263 ~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 339 (509)
.+......+ ...+.. .++++...++ ...++.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~l~----------~~~~~~~~ 299 (399)
T 3tqx_A 264 WLRNRSRPYLFSNTVAPV----------------------------------IVATSLKVLE----------LLKTEGPQ 299 (399)
T ss_dssp HHHHHCHHHHSSCCCCHH----------------------------------HHHHHHHHHH----------HHHHTHHH
T ss_pred HHHHhCcceeccCCCcHH----------------------------------HHHHHHHHHH----------HHhhccHH
Confidence 988753322 123333 2222222221 11145788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCC
Q psy13922 340 VLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVP 419 (509)
Q Consensus 340 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~ 419 (509)
+++.++++++++.+.|+++ |+++.++.+++ +|+.+.... +...+...+ .++||.+.|+..+...
T Consensus 300 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~l-~~~gi~v~~~~~~~~~- 363 (399)
T 3tqx_A 300 LRKQLQENSRYFRAGMEKL-GFQLVPGNHPI-IPVMLGDAQ------------LATNMADHL-LQEGIYVVGFSYPVVP- 363 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCBCCCSSSE-EEEEEECHH------------HHHHHHHHH-HHTTEECCEECTTTSC-
T ss_pred HHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEEeCCHH------------HHHHHHHHH-HHCCCEEeeeCCCCCC-
Confidence 9999999999999999998 88877666655 555554111 134444444 4579999987544321
Q ss_pred CccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHH
Q psy13922 420 GTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKF 497 (509)
Q Consensus 420 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l 497 (509)
.+.+ ++|+++. .+++++++++++|
T Consensus 364 ----------------------------------------------~~~~--------~iRi~~~~~~~~~~i~~~~~~l 389 (399)
T 3tqx_A 364 ----------------------------------------------MGKA--------RIRVQMSAVHTQQQLDRAIEAF 389 (399)
T ss_dssp ----------------------------------------------TTCE--------EEEEECCTTCCHHHHHHHHHHH
T ss_pred ----------------------------------------------CCCc--------eEEEEeecCCCHHHHHHHHHHH
Confidence 2222 9999997 8999999999999
Q ss_pred HHHHHHH
Q psy13922 498 REFHEEF 504 (509)
Q Consensus 498 ~~~~~~~ 504 (509)
+++++++
T Consensus 390 ~~~~~~~ 396 (399)
T 3tqx_A 390 GQVGKKL 396 (399)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9998764
No 90
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.97 E-value=1.4e-29 Score=260.31 Aligned_cols=343 Identities=13% Similarity=0.075 Sum_probs=232.2
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCC--CCcchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYT--DSPGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~--~~~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~ 98 (509)
|+...|+.+++++.+.+.. .|. +..+..++++.+++++ | .+++ +|++|+|+++++..+++++.+
T Consensus 26 g~~~~~~~v~~a~~~~~~~-------~~~~~~~~~~~~l~~~la~~~----g--~~~~~~i~~~~g~t~a~~~~~~~~~~ 92 (393)
T 2huf_A 26 GPSNAPQRVLDAMSRPILG-------HLHPETLKIMDDIKEGVRYLF----Q--TNNIATFCLSASGHGGMEATLCNLLE 92 (393)
T ss_dssp SCCCCCHHHHHHTTSCCCC-------TTSHHHHHHHHHHHHHHHHHH----T--CCCSEEEEESSCHHHHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHHhhhcc-------CCCHHHHHHHHHHHHHHHHHh----C--CCCCcEEEEcCcHHHHHHHHHHHHhC
Confidence 4445688888877655433 132 2346678888888887 3 3454 899999999999999999988
Q ss_pred CCCCCCCeEEEcCCCChhH--HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLY--SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
+|| .|+++.|+|.++ ...++..|.+++.++.+++ +.+|++.|++.+++. ++++|++++|+||||.+++
T Consensus 93 ~gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~ 162 (393)
T 2huf_A 93 DGD----VILIGHTGHWGDRSADMATRYGADVRVVKSKVG--QSLSLDEIRDALLIH----KPSVLFLTQGDSSTGVLQG 162 (393)
T ss_dssp TTC----EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECC
T ss_pred CCC----EEEEECCCcchHHHHHHHHHcCCeeEEEeCCCC--CCCCHHHHHHHHhcc----CCcEEEEEccCCCccccCC
Confidence 888 999999999884 3445678999999998754 478999999999864 6899999999999999998
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
+++|+++|+++|+++|+|+++.... ...++.. . ...+++.|+||.+.|++|+ ||++ .
T Consensus 163 ---l~~i~~~~~~~~~~li~D~a~~~~~-----~~~~~~~----~------~~d~~~~s~sK~l~g~~G~--G~~~---~ 219 (393)
T 2huf_A 163 ---LEGVGALCHQHNCLLIVDTVASLGG-----APMFMDR----W------EIDAMYTGSQKVLGAPPGI--TPVS---F 219 (393)
T ss_dssp ---CTTHHHHHHHTTCEEEEECTTTBTT-----BCCCTTT----T------TCSEEECCSSSTTCCCSSC--EEEE---E
T ss_pred ---HHHHHHHHHHcCCEEEEEcccccCC-----CCcchhh----c------CccEEEECCCcccccCCCe--EEEE---E
Confidence 8899999999999999999986421 1111111 1 1245677999975367776 8988 5
Q ss_pred CHHHHHHHHHhhh---ccc-Ccchhh-hhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 257 DPGVKAMLHKSIS---AML-CPTVLA-LVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 257 ~~~~~~~l~~~~~---~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
++++++.+..... .+. ...... ...... ...+ ..++....++.++..++ +
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------~~~~~~~~~~~a~~~al----------~ 274 (393)
T 2huf_A 220 SHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFG---RPRI------------YHHTISSTLLYGLREAI----------A 274 (393)
T ss_dssp CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSS---SCCC------------CSCCCCHHHHHHHHHHH----------H
T ss_pred CHHHHHHHhhcCCCCceEEEchHHHHhhhcccc---ccCC------------CCCCCCHHHHHHHHHHH----------H
Confidence 7899988875421 100 000000 000000 0000 00001111333333222 1
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC---ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCe
Q psy13922 332 QFSR-EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ---GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGI 407 (509)
Q Consensus 332 ~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI 407 (509)
...+ .++++++.++++++++.+.|+++ |+++..+. +++++|++++ . +. +..++...+++++||
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~---------~~-~~~~~~~~L~~~~gi 341 (393)
T 2huf_A 275 MACEEGLPALIARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVTTIKVP--Q---------GV-DWLKAAQYAMKTYLV 341 (393)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECC--T---------TC-CHHHHHHHHHHHHCE
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEEEEEcC--C---------CC-CHHHHHHHHHHhCCE
Confidence 1212 26778888999999999999998 88877653 3556665553 1 22 244555566667799
Q ss_pred EEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe-e--
Q psy13922 408 CIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI-L-- 484 (509)
Q Consensus 408 ~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~-~-- 484 (509)
.+.+|..|.. .+ ++|+++ .
T Consensus 342 ~v~~g~~~~~------------------------------------------------~~----------~~Ri~~~~~~ 363 (393)
T 2huf_A 342 EISGGLGPTA------------------------------------------------GQ----------VFRIGLMGQN 363 (393)
T ss_dssp ECBCCCGGGT------------------------------------------------TT----------EEEEECCGGG
T ss_pred EEecCccccc------------------------------------------------CC----------EEEEEcccCc
Confidence 9998875432 23 899999 5
Q ss_pred cChHHHHHHHHHHHHHHHHHHh
Q psy13922 485 PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
.+++++++++++|++++++++.
T Consensus 364 ~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 364 ATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp CSHHHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHHHcCC
Confidence 4688999999999999987654
No 91
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.97 E-value=4e-29 Score=255.62 Aligned_cols=342 Identities=13% Similarity=0.094 Sum_probs=231.2
Q ss_pred CCCCHHHHHHHHHHHhcccCCCcccCCC----CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh--
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQSVGSYTD----SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-- 97 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~~~~Y~~----~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-- 97 (509)
...|+.+++++.+.+..........|.. ..+..++++.+++++ | +++++|++|+|+++++.++++++.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a~~~~~~~l~~~ 83 (382)
T 4eb5_A 10 KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV----N--GGGGTVVFTSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH----T--CTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEcCchHHHHHHHHHHHHhh
Confidence 4578999999999987632222212432 235567777777777 4 456799999999999999999998
Q ss_pred --cCCCCCCCeEEEcCCCChhHHHHHH---hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 98 --EDVDGKKPGVLIPIPQYPLYSASLA---EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 98 --~~gd~~~~~Vlv~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
++|| .|+++.|+|.++...+. ..|++++.++.+++ +.+|++.|++.+++ ++++|++++|+||||
T Consensus 84 ~~~~gd----~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~-----~~~~v~~~~~~nptG 152 (382)
T 4eb5_A 84 NARKGK----HILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKY--GEVDVSFIDQKLRD-----DTILVSVQHANNEIG 152 (382)
T ss_dssp HGGGCC----EEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTT--SCBCHHHHHHHCCT-----TEEEEECCSBCTTTC
T ss_pred ccCCCC----EEEECCCcchHHHHHHHHHHhCCcEEEEeccCCC--CccCHHHHHHHhcC-----CCeEEEEeccCCCcc
Confidence 8888 99999999998877665 36999999998753 57899999999876 789999999999999
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
.+++ +++|+++|+++|++ |+|++|... . ...++... + ..+++.|+||.+ |++| +||++
T Consensus 153 ~~~~---l~~i~~l~~~~~~~-i~D~a~~~g----~-~~~~~~~~----~------~di~~~s~sK~~-g~~g--~G~~~ 210 (382)
T 4eb5_A 153 TIQP---VEEISEVLAGKAAL-HIDATASVG----Q-IEVDVEKI----G------ADMLTISSNDIY-GPKG--VGALW 210 (382)
T ss_dssp BBCC---HHHHHHHHTTSSEE-EEECTTTBT----T-BCCCHHHH----T------CSEEEEETGGGT-CCSS--CEEEE
T ss_pred ccCC---HHHHHHHHHHCCCE-EEEcchhcC----C-cccCcccc----C------CCEEEeehHHhc-CCCc--eEEEE
Confidence 9998 78999999999999 999999832 1 11233222 1 146677999998 7666 58876
Q ss_pred eecCCHHHHHHHHHhh--------hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCC
Q psy13922 253 VINLDPGVKAMLHKSI--------SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQ 324 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 324 (509)
+ +++. .+.... ...+.++.. .+.++..++
T Consensus 211 ~---~~~~--~l~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~al---- 247 (382)
T 4eb5_A 211 I---RKEA--KLQPVILGGGQENGLRSGSENVP----------------------------------SIVGFGKAA---- 247 (382)
T ss_dssp E---ETTC--CCCCSSCSSCTGGGTSCSCCCHH----------------------------------HHHHHHHHH----
T ss_pred E---cccc--ccCceecCCCccccccCCCccHH----------------------------------HHHHHHHHH----
Confidence 3 3321 111110 001111221 222222222
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCc---eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHH
Q psy13922 325 PGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQG---AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFEL 401 (509)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 401 (509)
+...++++++++.++++++++.+.|+++|++++..+.+ +.++++.++ +. +...+ .+.
T Consensus 248 ------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~-~~~ 307 (382)
T 4eb5_A 248 ------EITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS------------YI-EGESI-VLS 307 (382)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET------------TS-CHHHH-HHH
T ss_pred ------HHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC------------Cc-CHHHH-HHH
Confidence 22223467888999999999999999988888776542 334554443 11 23444 445
Q ss_pred HhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEE
Q psy13922 402 LERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRT 481 (509)
Q Consensus 402 l~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rl 481 (509)
|.++||.+.||..|..... -|+ ..+...|.....+.+ ++|+
T Consensus 308 l~~~gi~v~~g~~~~~~~~--------------------------~~~-----~~~~~~g~~~~~~~~--------~iRi 348 (382)
T 4eb5_A 308 LDMAGIQASTGSACSSKTL--------------------------QPS-----HVLMACGLKHEEAHG--------TLLL 348 (382)
T ss_dssp HHHHTCBCBCCCGGGTSSC--------------------------CCC-----HHHHHTTCCHHHHTT--------EEEE
T ss_pred HHHCCEEEeccccccCCCC--------------------------ccc-----HHHHHcCCChhccCC--------eEEE
Confidence 5678999999987665100 000 000000000000112 8999
Q ss_pred Eee--cChHHHHHHHHHHHHHHHHHHh
Q psy13922 482 TIL--PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 482 s~~--~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
++. ++++++++++++|+++++++++
T Consensus 349 ~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 349 TLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 6899999999999999987765
No 92
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.97 E-value=3.1e-29 Score=257.80 Aligned_cols=343 Identities=12% Similarity=-0.008 Sum_probs=230.2
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
++...|+.+++++.+.+.. ...|....+..++|+.+++++ | .++++|++|+|+++++..+++++.++||
T Consensus 16 ~~~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~t~g~t~a~~~~~~~~~~~gd 84 (392)
T 2z9v_A 16 GPVNAYPEVLRGLGRTVLY-----DYDPAFQLLYEKVVDKAQKAM----R--LSNKPVILHGEPVLGLEAAAASLISPDD 84 (392)
T ss_dssp SCCCCCHHHHHHTTSCCCC-----TTSHHHHHHHHHHHHHHHHHT----T--CSSCCEEESSCTHHHHHHHHHHHCCTTC
T ss_pred CCcCCCHHHHHHHhccccc-----cccHHHHHHHHHHHHHHHHHh----C--CCCCEEEEeCCchHHHHHHHHHhcCCCC
Confidence 3445678888887665543 111223345678888888887 4 3568999999999999999999988888
Q ss_pred CCCCeEEEcCCCChhH--HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 102 GKKPGVLIPIPQYPLY--SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
.|+++.|+|+++ ...++..|.+++.++.+++ +.+|++.|++.+++. +++++|++++|+||||.+++
T Consensus 85 ----~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~---~~~~~v~~~~~~nptG~~~~--- 152 (392)
T 2z9v_A 85 ----VVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYN--EAIDPQAVADMLKAH---PEITVVSVCHHDTPSGTINP--- 152 (392)
T ss_dssp ----CEEEEESSHHHHHHHHHHHHHCSCEEEEECCTT--SCCCHHHHHHHHHHC---TTCCEEEEESEEGGGTEECC---
T ss_pred ----EEEEecCCcccHHHHHHHHHcCCceEEeeCCCC--CCCCHHHHHHHHhcC---CCCcEEEEeccCCCCceecc---
Confidence 999999999875 3445668999999998764 368999999999641 16899999999999999998
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|.++|+++|+++|+|++|+.... ..++. +.+ ..+++.|+||.+.|.+| +||++ .+++
T Consensus 153 l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~----~~~------~d~~~~s~sK~~~~~~g--~G~l~---~~~~ 212 (392)
T 2z9v_A 153 IDAIGALVSAHGAYLIVDAVSSFGGM-----KTHPE----DCK------ADIYVTGPNKCLGAPPG--LTMMG---VSER 212 (392)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTBTTB-----SCCGG----GGT------CSEEEECSSSTTCCCSC--CEEEE---ECHH
T ss_pred HHHHHHHHHHcCCeEEEEcccccCCc-----ccccc----ccc------ceEEEecCcccccCCCc--eeEEE---ECHH
Confidence 78999999999999999999974221 11211 111 14567799996634555 49998 6888
Q ss_pred HHHHHHHhhh----cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 260 VKAMLHKSIS----AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 260 ~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
+++.+..... ...+.... +.. +. ......+......+.++..++ +.+.+
T Consensus 213 ~~~~l~~~~~g~~~~~~~~~~~--------~~~--~~-------~~~~~~~~~~~~~~~a~~~al----------~~~~~ 265 (392)
T 2z9v_A 213 AWAKMKANPLAPRASMLSIVDW--------ENA--WS-------RDKPFPFTPSVSEINGLDVAL----------DLYLN 265 (392)
T ss_dssp HHHHHHTCTTSCCSSTTCSGGG--------TTT--TS-------TTSCCSSCCCHHHHHHHHHHH----------HHHHH
T ss_pred HHHHhhhccCCCCceeccHHHH--------Hhh--hc-------ccCCCCCCCCHHHHHHHHHHH----------HHHHh
Confidence 8888864321 00000000 000 00 000000011111222222221 22223
Q ss_pred H-HHHHHHHHHHHHHHHHHHHhcCCCCeecc-CC---ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 336 E-KQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQ---GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 336 ~-~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~---~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
+ ++++++.++++++++.+.|+++ |+++.. +. .+.++|+.++ . +. +..++...+.+++||.+.
T Consensus 266 ~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--~---------~~-~~~~l~~~L~~~~gi~v~ 332 (392)
T 2z9v_A 266 EGPEAVWARHALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRTP--D---------GV-DEKALRQAARARYGVVFS 332 (392)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECC--T---------TC-CHHHHHHHHHHHHCEECE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEECC--C---------CC-CHHHHHHHHHhcCCEEEe
Confidence 3 6778889999999999999988 888765 32 4556665553 1 22 244545555555599999
Q ss_pred cCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe-e--cCh
Q psy13922 411 PGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI-L--PQP 487 (509)
Q Consensus 411 pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~-~--~~~ 487 (509)
||..+.. .+ ++|+++ + +++
T Consensus 333 ~g~~~~~------------------------------------------------~~----------~lRi~~~~~~~~~ 354 (392)
T 2z9v_A 333 SGRGETL------------------------------------------------GK----------LTRIGHMGPTAQP 354 (392)
T ss_dssp ECCGGGT------------------------------------------------TT----------EEEEECCGGGCSH
T ss_pred cCCCCCC------------------------------------------------CC----------eEEEeCcccccCH
Confidence 9874322 22 899995 4 799
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy13922 488 EKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 488 ~~i~~~~~~l~~~~~~~~ 505 (509)
+++++++++|+++++++.
T Consensus 355 ~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 355 IYAIAALTALGGAMNAAG 372 (392)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 999999999999987654
No 93
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.97 E-value=2.6e-29 Score=258.65 Aligned_cols=346 Identities=11% Similarity=0.095 Sum_probs=232.5
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCcccCCCC--cchHHHHHHHHHHHhhhcCCCCCCC-cEEEeCCHHHHHHHHHHHhhcC
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVGSYTDS--PGIEIIRRHVAQYISRRDGQPADWQ-DVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~--~g~~~lr~~va~~l~~~~g~~~~~~-~i~~t~G~~~al~~~~~~l~~~ 99 (509)
+..+|+.+++++.+.+.. +|.+. ....++|++++++++ .+++ +|++|+|+++++..+++++.++
T Consensus 26 p~~~~~~v~~a~~~~~~~-------~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~~~ 92 (396)
T 2ch1_A 26 PSNCSKRVLTAMTNTVLS-------NFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLLEE 92 (396)
T ss_dssp SCCCCHHHHHHTTSCCCC-------TTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHCCT
T ss_pred CCCCCHHHHHHhcccccc-------CCChhHHHHHHHHHHHHHHHhC------CCCCcEEEECCcHHHHHHHHHHHhcCC
Confidence 334577777766443321 24332 236889999999983 4566 8999999999999999999988
Q ss_pred CCCCCCeEEEcCCCChhHH--HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 100 VDGKKPGVLIPIPQYPLYS--ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
|| .|+++.|+|.++. ..++..|++++.++.++ ++.+|++.|++.+++. ++++|++++|+||||.+++
T Consensus 93 gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~- 161 (396)
T 2ch1_A 93 GD----RVLIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELH----QPKCLFLTHGDSSSGLLQP- 161 (396)
T ss_dssp TC----EEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECC-
T ss_pred CC----eEEEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhC----CCCEEEEECCCCCCceecC-
Confidence 88 9999999999984 47788899999999875 4579999999999864 6899999999999999999
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++|+++|+++|+++|+||+|.... ...++.. . +.+++ +.|++|.+.|. .++|+++ .+
T Consensus 162 --~~~i~~l~~~~~~~li~Dea~~~g~-----~~~~~~~----~-----~~d~~-~~s~~K~~~~~--~g~g~~~---~~ 219 (396)
T 2ch1_A 162 --LEGVGQICHQHDCLLIVDAVASLCG-----VPFYMDK----W-----EIDAV-YTGAQKVLGAP--PGITPIS---IS 219 (396)
T ss_dssp --CTTHHHHHHHTTCEEEEECTTTBTT-----BCCCTTT----T-----TCCEE-ECCCC-CCCCC--SSCEEEE---EC
T ss_pred --HHHHHHHHHHcCCEEEEEccccccC-----Cccchhh----c-----CcCEE-EEcCCccccCC--CCeEEEE---EC
Confidence 8889999999999999999998321 1111111 1 11244 56899987433 4568887 57
Q ss_pred HHHHHHHHHhhh---c-ccCcchhh-hhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 258 PGVKAMLHKSIS---A-MLCPTVLA-LVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 258 ~~~~~~l~~~~~---~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
+++++.+..... . ..+..... ....... ..+ ..++....++.++..+++ ..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------~~~~~~~~~~~a~~~al~---------~~ 275 (396)
T 2ch1_A 220 PKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDE---PKR------------YHHTVASNLIFALREALA---------QI 275 (396)
T ss_dssp HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSS---CCC------------CCCCCCHHHHHHHHHHHH---------HH
T ss_pred HHHHHhhhhccCcccceEechHHHHHhhhhhcc---cCC------------CCCCCcHHHHHHHHHHHH---------HH
Confidence 788887754211 0 00000000 0000000 000 000111113333333322 10
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCce----eEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeE
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGA----MYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGIC 408 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~ 408 (509)
..++++++++.++++++++.+.|+++ |+++..+.++ .++|+.++ . +. +..++...+++++||.
T Consensus 276 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--~---------~~-~~~~~~~~L~~~~gi~ 342 (396)
T 2ch1_A 276 AEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIP--K---------GV-DWWKVSQYAMNNFSLE 342 (396)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCTTEEEEECC--T---------TC-CHHHHHHHHHHHHCBC
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccccCCceEEEEcC--C---------CC-CHHHHHHHHHHhCCEE
Confidence 11236788889999999999999998 8888776653 35665553 1 22 3445556666667999
Q ss_pred EecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe-e--c
Q psy13922 409 IVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI-L--P 485 (509)
Q Consensus 409 v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~-~--~ 485 (509)
+++|..+.. .+ ++|+++ . .
T Consensus 343 v~~g~~~~~------------------------------------------------~~----------~iRi~~~~~~~ 364 (396)
T 2ch1_A 343 VQGGLGPTF------------------------------------------------GK----------AWRVGIMGECS 364 (396)
T ss_dssp CBCCCGGGT------------------------------------------------TT----------EEEEECCGGGC
T ss_pred EecCccccC------------------------------------------------CC----------EEEEECCCCcC
Confidence 998764322 23 899999 3 4
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcC
Q psy13922 486 QPEKLKAMLEKFREFHEEFLAKYK 509 (509)
Q Consensus 486 ~~~~i~~~~~~l~~~~~~~~~~~~ 509 (509)
+++++++++++|+++++++.+.|+
T Consensus 365 ~~e~i~~~~~~l~~~l~~~~~~~~ 388 (396)
T 2ch1_A 365 TVQKIQFYLYGFKESLKATHPDYI 388 (396)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred CHHHHHHHHHHHHHHHHHhCccEE
Confidence 889999999999999998877663
No 94
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.97 E-value=9.3e-29 Score=255.39 Aligned_cols=328 Identities=12% Similarity=0.053 Sum_probs=231.7
Q ss_pred CHHHHHHHHHHHhcccCC---CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh--cCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQ---SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI--EDVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~---~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--~~gd 101 (509)
+|.+++++.+.+...... ....|+...+..++|++++++++ .+++|++|+|++ ++..++..+. .+||
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-------~~~~i~~~sG~~-a~~~~~~~l~~~~~gd 133 (401)
T 2bwn_A 62 HPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ-------KEAALVFSSAYN-ANDATLSTLRVLFPGL 133 (401)
T ss_dssp CHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT-------CSEEEEESCHHH-HHHHHHHHHHHHSTTC
T ss_pred CHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC-------CCcEEEECCcHH-HHHHHHHHHhcCCCCC
Confidence 578999999998863221 12236677788999999999983 247888888876 7767766654 4777
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.|+++.|+|.++...++..|++++.++.+ |++.|++.++.... .++++|++++|+||||.+++ ++
T Consensus 134 ----~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~-~~~~~v~~~~~~nptG~~~~---l~ 198 (401)
T 2bwn_A 134 ----IIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDP-AAPKLIAFESVYSMDGDFGP---IK 198 (401)
T ss_dssp ----EEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCT-TSCEEEEEESBCTTTCCBCC---HH
T ss_pred ----EEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhcc-CCceEEEEecCcCCCCCcCC---HH
Confidence 99999999999999999999999998864 78999998874210 16899999999999999998 89
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|+++|+++|+++|+||+|....++.. ..++.. ..++. ....++++|+||.+ |++| ||++ .+++++
T Consensus 199 ~i~~l~~~~~~~li~Dea~~~g~~~~~--g~~~~~-~~~~~----~~~~i~~~s~sK~~-~~~G---G~~~---~~~~~~ 264 (401)
T 2bwn_A 199 EICDIAEEFGALTYIDEVHAVGMYGPR--GAGVAE-RDGLM----HRIDIFNGTLAKAY-GVFG---GYIA---ASARMV 264 (401)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTSSTT--SCCHHH-HHTCG----GGCSEEEEESSSTT-CSCC---EEEE---ECHHHH
T ss_pred HHHHHHHHcCCEEEEeccccccccCCC--Cceeee-ccCcc----ccCcEEEeechhhc-cCCC---CEEe---cCHHHH
Confidence 999999999999999999996554321 122321 11110 11257788999999 6777 9998 688898
Q ss_pred HHHHHhhhc---ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 262 AMLHKSISA---MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 262 ~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+.+...... ..+.+.. .++++..+++ +... ..++
T Consensus 265 ~~l~~~~~~~~~~~~~~~~----------------------------------~~~a~~~al~--------~~~~-~~~~ 301 (401)
T 2bwn_A 265 DAVRSYAPGFIFSTSLPPA----------------------------------IAAGAQASIA--------FLKT-AEGQ 301 (401)
T ss_dssp HHHHHHCHHHHTSBCCCHH----------------------------------HHHHHHHHHH--------HHTS-HHHH
T ss_pred HHHHHhCcCceecCCCCHH----------------------------------HHHHHHHHHH--------HHHh-cccH
Confidence 887754321 1112223 2222222211 0000 0136
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
++++.++++++++.+.|+++ |+++.++.++ ++|+.+.... +...+...+++++||.+.|+..|+..
T Consensus 302 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~L~~~~gi~v~~~~~~~~~ 367 (401)
T 2bwn_A 302 KLRDAQQMHAKVLKMRLKAL-GMPIIDHGSH-IVPVVIGDPV------------HTKAVSDMLLSDYGVYVQPINFPTVP 367 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCCBCCCSSS-CEEEECCCHH------------HHHHHHHHHHHHHCEECCEECTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccCCCCC-eEEEEeCChH------------HHHHHHHHHHhcCCEEEeecCCCCCC
Confidence 77888899999999999988 8888777776 5666554111 13344455556889999998766541
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEK 496 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~ 496 (509)
.+.+ ++|+++. ++++++++++++
T Consensus 368 -----------------------------------------------~~~~--------~iRis~~~~~t~~~i~~~~~~ 392 (401)
T 2bwn_A 368 -----------------------------------------------RGTE--------RLRFTPSPVHDLKQIDGLVHA 392 (401)
T ss_dssp -----------------------------------------------TTCC--------EEEECCCTTSCHHHHHHHHHH
T ss_pred -----------------------------------------------CCCc--------eEEEEeeCCCCHHHHHHHHHH
Confidence 1223 8999998 799999999999
Q ss_pred HHHHHHH
Q psy13922 497 FREFHEE 503 (509)
Q Consensus 497 l~~~~~~ 503 (509)
|++++++
T Consensus 393 l~~~~~~ 399 (401)
T 2bwn_A 393 MDLLWAR 399 (401)
T ss_dssp HHHHC--
T ss_pred HHHHHHh
Confidence 9988764
No 95
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.97 E-value=3.3e-29 Score=259.76 Aligned_cols=203 Identities=15% Similarity=0.136 Sum_probs=158.6
Q ss_pred CCCCCCC--CHHHHHHHHHHHhccc-CCCcccCCCCcchH---HHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHH
Q psy13922 20 LFDDPRF--PDDVKQRAQAVLDGCR-GQSVGSYTDSPGIE---IIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVL 93 (509)
Q Consensus 20 ~~~~~~~--p~~v~~a~~~~l~~~~-~~~~~~Y~~~~g~~---~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~ 93 (509)
-+++|++ |+.+.+++.+.++... ......|+. .|.+ ++++++++++ |. +++++++|+++++..++
T Consensus 24 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~----g~----~~~i~~~~g~~ai~~~~ 94 (404)
T 1e5e_A 24 AAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE----KT----EACVATSSGMGAIAATV 94 (404)
T ss_dssp CSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH----TC----SEEEEESSHHHHHHHHH
T ss_pred CcCCCCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh----CC----CcEEEeCChHHHHHHHH
Confidence 3477777 3455555555544111 122233776 4545 8999999988 32 37888888899999999
Q ss_pred HHhhcCCCCCCCeEEEcCCCChhHHH----HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 94 KLLIEDVDGKKPGVLIPIPQYPLYSA----SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 94 ~~l~~~gd~~~~~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
++++++|| .|+++.|+|.++.. .++..|++++.++.+ |++.|++.+++ ++++|++++|+|
T Consensus 95 ~~l~~~gd----~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~-----~t~~v~l~~p~N 158 (404)
T 1e5e_A 95 LTILKAGD----HLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKP-----NTKIVYFETPAN 158 (404)
T ss_dssp HHHCCTTC----EEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCT-----TEEEEEEESSCT
T ss_pred HHHhCCCC----EEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCC-----CCcEEEEECCCC
Confidence 99999988 99999999999888 678899999999864 67899988876 799999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHH-CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 170 PTGQVLTKENIQDIIKFAHR-EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 170 PtG~~~s~~~l~~l~~ia~~-~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
|||.+++ +++|+++|++ +|+++|+|++|..+.+.. ++ . .+ ..++++|+||.+ |.+|+|+
T Consensus 159 ptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~-----~~-~----~~------~di~~~S~sK~~-~~~g~ri 218 (404)
T 1e5e_A 159 PTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN-----PV-D----FG------VDVVVHSATKYI-NGHTDVV 218 (404)
T ss_dssp TTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC-----GG-G----GT------CSEEEEETTTTT-TCSSCCC
T ss_pred CCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC-----cc-c----cC------CEEEEEcCcccc-CCCCCCe
Confidence 9999997 8999999999 999999999999876531 11 1 11 267788999999 6899998
Q ss_pred -EEEeeecCCHHHHH-HHHHhhhc
Q psy13922 249 -GYSEVINLDPGVKA-MLHKSISA 270 (509)
Q Consensus 249 -G~v~~~~~~~~~~~-~l~~~~~~ 270 (509)
||++ .++++++ .+......
T Consensus 219 ~G~~~---~~~~~~~~~l~~~~~~ 239 (404)
T 1e5e_A 219 AGLIC---GKADLLQQIRMVGIKD 239 (404)
T ss_dssp CEEEE---ECHHHHHHHHHTCCCC
T ss_pred EEEEE---ECHHHHHHHHHHHHHh
Confidence 9998 6888877 77766553
No 96
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.97 E-value=3.4e-30 Score=264.39 Aligned_cols=343 Identities=14% Similarity=0.117 Sum_probs=229.4
Q ss_pred CCHHHHHHHHHHHhccc---CCCcccCCC-CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCC
Q psy13922 26 FPDDVKQRAQAVLDGCR---GQSVGSYTD-SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDV 100 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~---~~~~~~Y~~-~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~g 100 (509)
.|+.+++++.+.+.... ......|+. ..+..++|+++++++ | +++++|++|+|+++++..+++++ .++|
T Consensus 28 ~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a~~~~~~~~~~~~g 101 (390)
T 1elu_A 28 LPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF----N--VDPNTITITDNVTTGCDIVLWGLDWHQG 101 (390)
T ss_dssp CCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT----T--SCGGGEEEESSHHHHHHHHHHHSCCCTT
T ss_pred CCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc----C--CCHHHEEEeCChHHHHHHHHhCCCCCCC
Confidence 47789999998887621 011113654 467789999999998 3 56779999999999999999999 7888
Q ss_pred CCCCCeEEEcCCCChhHHHH----HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 101 DGKKPGVLIPIPQYPLYSAS----LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
| +|+++.|+|.++... ++..|++++.++.++..++.+|++.|++.+++ ++++|++++|+||||.+++
T Consensus 102 d----~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-----~~~~v~~~~~~nptG~~~~ 172 (390)
T 1elu_A 102 D----EILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP-----KTRLVILSHLLWNTGQVLP 172 (390)
T ss_dssp C----EEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT-----TEEEEEEESBCTTTCCBCC
T ss_pred C----EEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC-----CceEEEEeccccCCceecC
Confidence 8 999999999997654 46679999999987434578999999998876 7999999999999999999
Q ss_pred HHHHHHHHHHHH----HCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 177 KENIQDIIKFAH----REKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 177 ~~~l~~l~~ia~----~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
+++|.++|+ ++|+++|+|++|..... ...+. + ....+++.|+||.+. +|.++||++
T Consensus 173 ---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~-----~~~~~----~------~~~d~~~~s~~K~~~--~~~g~G~~~ 232 (390)
T 1elu_A 173 ---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSL-----PLDFS----R------LEVDYYAFTGHKWFA--GPAGVGGLY 232 (390)
T ss_dssp ---HHHHHHHHHHCCSSSCCEEEEECTTTBTTB-----CCCTT----T------SCCSEEEEESSSTTC--CCTTCEEEE
T ss_pred ---HHHHHHHHhhhhhhcCcEEEEEcccccCCc-----CCChh----h------cCCCEEEcccccccc--CCCceEEEE
Confidence 889999999 99999999999985321 11110 1 112466789999542 556789998
Q ss_pred eecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 253 VINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
.++++++.+......+...... +....|. .......+..+......+.++..+++ +-.
T Consensus 233 ---~~~~~~~~~~~~~~g~~~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~al~--------~l~ 290 (390)
T 1elu_A 233 ---IHGDCLGEINPTYVGWRSITYG--------AKGEPTG---WAEGGKRFEVATSAYPQYAGLLAALQ--------LHQ 290 (390)
T ss_dssp ---ECTTTGGGCCCCSCCTTTEEEC--------TTSCEEE---ECSGGGGGCCSCCCHHHHHHHHHHHH--------HHH
T ss_pred ---ECHHhHhhcCCccccCCccccc--------ccCcccc---cccchHhhCCCCCCHHHHHHHHHHHH--------HHH
Confidence 5677766654321111000000 0000000 00000000001111112333322221 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec---cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE
Q psy13922 333 FSREKQSVLDSLKQRAKMVADTFNSIEGMSCN---PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI 409 (509)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 409 (509)
...+++++++.++++++.+.+.|++++|+++. ++.++++.| +++ . +. +..++. +.|.++||.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~--~---------~~-~~~~~~-~~l~~~gi~v 356 (390)
T 1elu_A 291 RQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSF-TVD--S---------PL-GHRAIV-QKLEEQRIYL 356 (390)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEE-EEC--S---------SS-CHHHHH-HHHHHTTEEC
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEE-EcC--C---------CC-CHHHHH-HHHHHCCEEE
Confidence 11137788899999999999999998888877 346777766 553 1 21 234444 4446789999
Q ss_pred ecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cCh
Q psy13922 410 VPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQP 487 (509)
Q Consensus 410 ~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~ 487 (509)
+||. . ++ ++|+++. .++
T Consensus 357 ~~~~---~------------------------------------------------~~----------~iRis~~~~~~~ 375 (390)
T 1elu_A 357 RTIA---D------------------------------------------------PD----------CIRACCHYITDE 375 (390)
T ss_dssp EEET---T------------------------------------------------TT----------EEEEECCTTCCH
T ss_pred EecC---C------------------------------------------------CC----------eEEEecccCCCH
Confidence 9865 1 22 8999985 899
Q ss_pred HHHHHHHHHHHHH
Q psy13922 488 EKLKAMLEKFREF 500 (509)
Q Consensus 488 ~~i~~~~~~l~~~ 500 (509)
+++++++++|+++
T Consensus 376 ~~i~~~~~~l~~~ 388 (390)
T 1elu_A 376 EEINHLLARLADF 388 (390)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988753
No 97
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.97 E-value=4.5e-28 Score=248.67 Aligned_cols=320 Identities=10% Similarity=0.060 Sum_probs=227.9
Q ss_pred CCHHHHHHHHHHHhcccC-CCcccC--CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRG-QSVGSY--TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDG 102 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~-~~~~~Y--~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~ 102 (509)
.|+.+.+++.+.+..... .....| +...+..++|+++++++ | ++ +.+++++| ++++..+++++.++||
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g--~~-~~i~~~sG-t~a~~~~~~~~~~~gd- 124 (384)
T 1bs0_A 54 HHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL----G--YS-RALLFISG-FAANQAVIAAMMAKED- 124 (384)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH----T--CS-EEEEESCH-HHHHHHHHHHHCCTTC-
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh----C--CC-cEEEeCCc-HHHHHHHHHHhCCCCc-
Confidence 367899999998876321 111223 55678899999999998 3 22 44555555 8999999999998888
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
.|+++.|+|..+...++..|.+++.+|. .|++.|++.+++.. .++++|++++|+||||.+++ +++
T Consensus 125 ---~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~--~~~~~v~~~~~~nptG~~~~---l~~ 189 (384)
T 1bs0_A 125 ---RIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPC--PGQQMVVTEGVFSMDGDSAP---LAE 189 (384)
T ss_dssp ---EEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCC--SSCEEEEEESBCTTTCCBCC---HHH
T ss_pred ---EEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcC--CCCeEEEEeCCCCCCCCccC---HHH
Confidence 9999999999999999999999999873 47899999987621 12678888999999999998 889
Q ss_pred HHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHH
Q psy13922 183 IIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKA 262 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~ 262 (509)
|+++|+++|+++|+||+|+.+.+... ..++... .+. .. .++++|+||.+ |++| ||++ .++++++
T Consensus 190 i~~l~~~~~~~li~De~~~~~~~~~~--~~~~~~~---~~~---~~-di~~~s~sK~~-~~~G---G~~~---~~~~~~~ 253 (384)
T 1bs0_A 190 IQQVTQQHNGWLMVDDAHGTGVIGEQ--GRGSCWL---QKV---KP-ELLVVTFGKGF-GVSG---AAVL---CSSTVAD 253 (384)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTSSGG--GCCHHHH---TTC---CC-SEEEEESSSTT-SSCC---EEEE---ECHHHHH
T ss_pred HHHHHHHcCcEEEEECCcccceecCC--CCchHHh---cCC---CC-cEEEeeccchh-hccC---cEEE---eCHHHHH
Confidence 99999999999999999988654311 1122221 111 12 37788999999 6666 9998 6899999
Q ss_pred HHHHhhhcc---cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH--HH
Q psy13922 263 MLHKSISAM---LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR--EK 337 (509)
Q Consensus 263 ~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~--~~ 337 (509)
.+......+ .+.+.+ .++++..+++ ..+ +.
T Consensus 254 ~l~~~~~~~~~~~~~~~~----------------------------------~~~~~~~al~-----------~~~~~~~ 288 (384)
T 1bs0_A 254 YLLQFARHLIYSTSMPPA----------------------------------QAQALRASLA-----------VIRSDEG 288 (384)
T ss_dssp HHHHHCHHHHSSBCCCHH----------------------------------HHHHHHHHHH-----------HHHSHHH
T ss_pred HHHHhchhhhcCCCCCHH----------------------------------HHHHHHHHHH-----------HHhcccc
Confidence 887643211 234444 3333332221 222 46
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++.++.++++++.+.+.|+++ ++++.++ ++.++|++++... +..++... |.++||.+.||..|+.
T Consensus 289 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~------------~~~~l~~~-l~~~gi~v~~~~~~~~ 353 (384)
T 1bs0_A 289 DARREKLAALITRFRAGVQDL-PFTLADS-CSAIQPLIVGDNS------------RALQLAEK-LRQQGCWVTAIRPPTV 353 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS-SCEECSC-CSSBCCEEEESHH------------HHHHHHHH-HHHTTEECCEECTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCcccCC-CCCEEEEEeCCHH------------HHHHHHHH-HHHCCcEEEeecCCCC
Confidence 678889999999999999998 7877654 4455566553111 13344444 4456999999887654
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLE 495 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~ 495 (509)
. .+.+ ++|+++. +++++++++++
T Consensus 354 ~-----------------------------------------------~~~~--------~~Ri~~~~~~~~~~i~~~~~ 378 (384)
T 1bs0_A 354 P-----------------------------------------------AGTA--------RLRLTLTAAHEMQDIDRLLE 378 (384)
T ss_dssp C-----------------------------------------------TTCE--------EECCBCCTTCCHHHHHHHHH
T ss_pred C-----------------------------------------------CCCc--------eEEEEEcCCCCHHHHHHHHH
Confidence 1 1222 8999998 48999999999
Q ss_pred HHHHH
Q psy13922 496 KFREF 500 (509)
Q Consensus 496 ~l~~~ 500 (509)
+|+++
T Consensus 379 ~l~~~ 383 (384)
T 1bs0_A 379 VLHGN 383 (384)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99864
No 98
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=9.5e-29 Score=255.48 Aligned_cols=322 Identities=13% Similarity=0.080 Sum_probs=214.2
Q ss_pred HHHHHHHHhhcC-CCCC---CCCCCCHHHHHHHHHHHhcccCCCcccCC----CCcchHHHHHHHHHHHhhhcCCCCCCC
Q psy13922 6 SLSLQVLALVSL-PQLF---DDPRFPDDVKQRAQAVLDGCRGQSVGSYT----DSPGIEIIRRHVAQYISRRDGQPADWQ 77 (509)
Q Consensus 6 ~~~~~~~~~~~~-~~~~---~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~----~~~g~~~lr~~va~~l~~~~g~~~~~~ 77 (509)
..+|+.+..... .-.+ ..+..|+.+++++.+.+..........|+ ...+..++++.+++++ | ++++
T Consensus 14 ~~~r~~fp~~~~~~~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~ 87 (406)
T 3cai_A 14 ARVRGLHPSLGDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV----N--ADPG 87 (406)
T ss_dssp HHHHHTCTTTTSSCEECBGGGCCCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH----T--CCGG
T ss_pred HHHHHhhhhcCCCeEEEeCCCcCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh----C--CCCC
Confidence 345555544432 1223 33457899999999998863211112243 2456678888888888 3 4568
Q ss_pred cEEEeCCHHHHHHHHHHHh---hcCCCCCCCeEEEcCCCChhHHHHHHh----cCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 78 DVILSAGASDGIKSVLKLL---IEDVDGKKPGVLIPIPQYPLYSASLAE----FNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l---~~~gd~~~~~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
+|++|+|+++++..+++++ .++|| .|+++.|+|.++...+.. .|++++.++.+++ ++.+|++.|++.+
T Consensus 88 ~v~~~~g~t~al~~~~~~l~~~~~~gd----~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l 162 (406)
T 3cai_A 88 GVVLGADRAVLLSLLAEASSSRAGLGY----EVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLI 162 (406)
T ss_dssp GEEEESCHHHHHHHHHHHTGGGGBTTC----EEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHC
T ss_pred eEEEeCChHHHHHHHHHHHhhccCCCC----EEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHh
Confidence 9999999999999999988 67787 999999999987655443 6999999998733 3578999999998
Q ss_pred HhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCcee
Q psy13922 151 TEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMEL 230 (509)
Q Consensus 151 ~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 230 (509)
++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.... ...++..+ +. .
T Consensus 163 ~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~-----~~~~~~~~----~~------d 219 (406)
T 3cai_A 163 SK-----STRLVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPY-----RLLDIRET----DA------D 219 (406)
T ss_dssp CT-----TEEEEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTT-----CCCCHHHH----CC------S
T ss_pred CC-----CceEEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCC-----CCCCchhc----CC------C
Confidence 76 7999999999999999998 8899999999999999999997521 11233222 11 4
Q ss_pred EEEEecccccCCCCCCeeE-EEeeecCCHHHHHHHHHhhhc----------ccCcchhhhhccccccCCCCCchhHHHHH
Q psy13922 231 ASFMSCSKGYMGECGLRGG-YSEVINLDPGVKAMLHKSISA----------MLCPTVLALVSLPQLFDDPRFPDDVKQRA 299 (509)
Q Consensus 231 i~i~S~SK~~~G~~Glr~G-~v~~~~~~~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (509)
+++.|+||.+ | ++ +| |++ .++++++.+...... .+.++..+. .+
T Consensus 220 ~~~~s~~K~~-g-~~--~G~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~------------------~a 274 (406)
T 3cai_A 220 VVTVNAHAWG-G-PP--IGAMVF---RDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLL------------------AG 274 (406)
T ss_dssp EEEEEGGGGT-S-CS--CEEEEE---SCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHH------------------HH
T ss_pred EEEeehhhhc-C-CC--cCeEEE---EehHHHhhcCCcccCCCCCccccccCCCccHHHH------------------HH
Confidence 5577999988 6 55 88 887 688887766543210 011111100 00
Q ss_pred HHhhhcccCcccccchhhcccCCCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC---ceeEEeec
Q psy13922 300 QAVLDGCRGQSVGQTVMDCVVNPPQPGEPS-YEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ---GAMYAFPQ 375 (509)
Q Consensus 300 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~---~g~~~~~~ 375 (509)
..+++....+......+. -.++.++++++++.++++++++.+.|+++|++++..+. ++ ++++.
T Consensus 275 ------------~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~ 341 (406)
T 3cai_A 275 ------------VVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFA 341 (406)
T ss_dssp ------------HHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS-EEEEE
T ss_pred ------------HHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC-EEEEE
Confidence 111222111100000000 01122247888899999999999999998888877653 45 45654
Q ss_pred CCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 376 MKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 376 ~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
+. +. +..++ ...|.++||.+.+|.
T Consensus 342 ~~------------~~-~~~~~-~~~L~~~gi~v~~g~ 365 (406)
T 3cai_A 342 VH------------KV-PADRV-VQRLADNGILAIANT 365 (406)
T ss_dssp ET------------TB-CHHHH-HHHHHHTTEECEECC
T ss_pred EC------------Cc-CHHHH-HHHHHHCCcEEecCC
Confidence 43 11 23343 455567899999887
No 99
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.97 E-value=4.7e-29 Score=255.15 Aligned_cols=323 Identities=11% Similarity=0.089 Sum_probs=230.0
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
++..+|+.+++++.+.+.. . .. +.......++++.+++++ |.+.+.++|++|+|+++++. ++..+.++||
T Consensus 9 gp~~~~~~v~~a~~~~~~~---~-~~-~~~~~~~~~~~~~la~~~----~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd 78 (384)
T 3zrp_A 9 GPTTIKEDVLVAGLENNVG---F-TS-KEFVEALAYSLKGLRYVM----GASKNYQPLIIPGGGTSAME-SVTSLLKPND 78 (384)
T ss_dssp SCSCCCHHHHHHTTCCSCC---T-TS-HHHHHHHHHHHHHHHHHH----TCCTTSEEEEEESCHHHHHH-HGGGGCCTTC
T ss_pred CCCCCCHHHHHHhhccccc---c-cc-HHHHHHHHHHHHHHHHHh----CCCCCCcEEEEcCCcHHHHH-HHHhhcCCCC
Confidence 4556788888887655433 1 11 122334566677777766 53333388999999999999 9999998888
Q ss_pred CCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 102 GKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
.|+++.|+|++ +...++..|.+++.++.+++ +.+|++.|++.+++. ++++|++++|+||||.+++
T Consensus 79 ----~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~--- 145 (384)
T 3zrp_A 79 ----KILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPG--DYVKPGEVEEEVRKS----EYKLVALTHVETSTGVREP--- 145 (384)
T ss_dssp ----EEEEECSSHHHHHHHHHHTTSSCEEEEECCSTT--CCCCHHHHHHHHHHS----CEEEEEEESEETTTTEECC---
T ss_pred ----EEEEecCCcchHHHHHHHHHcCCcEEEecCCCC--CCCCHHHHHHHHHhC----CCcEEEEeCCCCCCceECc---
Confidence 99999999965 66667888999999998764 478999999999874 6899999999999999998
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|.++|++||+++|+|++|...... .++.. ....+++.|+||.++ ++.++||++ .+++
T Consensus 146 l~~i~~l~~~~~~~li~D~a~~~~~~~-----~~~~~----------~~~d~~~~s~~K~~~--~~~g~g~~~---~~~~ 205 (384)
T 3zrp_A 146 VKDVINKIRKYVELIVVDGVSSVGAEE-----VKAEE----------WNVDVYLTASQKALG--SAAGLGLLL---LSPK 205 (384)
T ss_dssp HHHHHHHHGGGEEEEEEECTTTTTTSC-----CCTTT----------TTCSEEEEETTSTTC--CCSSEEEEE---ECHH
T ss_pred HHHHHHHHHhcCCEEEEECcccccCcc-----ccccc----------cCCCEEEecCccccc--CCCceEEEE---ECHH
Confidence 889999999999999999998754321 11111 012466779999884 344589998 6888
Q ss_pred HHHHH-H------------Hhhhc-----------ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccch
Q psy13922 260 VKAML-H------------KSISA-----------MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTV 315 (509)
Q Consensus 260 ~~~~l-~------------~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 315 (509)
+++.+ . ..... ++.++.. ...+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----------------------------------~~~a 251 (384)
T 3zrp_A 206 ALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVH----------------------------------VILQ 251 (384)
T ss_dssp HHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHH----------------------------------HHHH
T ss_pred HHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHH----------------------------------HHHH
Confidence 88877 2 11110 0112222 2333
Q ss_pred hhcccCCCCCCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCeeccCC----ceeEEeecCCCCHHHHHHHhhcC
Q psy13922 316 MDCVVNPPQPGEPSYEQFSRE-KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ----GAMYAFPQMKLPAKAIAKAKAEG 390 (509)
Q Consensus 316 l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~g 390 (509)
+..++ ....++ ++++++.++++++++.+.|+++ ++++..+. ++.++|+.++ +
T Consensus 252 ~~~al----------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~------------~ 308 (384)
T 3zrp_A 252 LAEAF----------RLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILK------------V 308 (384)
T ss_dssp HHHHH----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECS------------S
T ss_pred HHHHH----------HHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECC------------C
Confidence 32222 112222 6788899999999999999998 88887666 5667776664 2
Q ss_pred CCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCC
Q psy13922 391 KCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGF 470 (509)
Q Consensus 391 ~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (509)
.+..++. ..|.++||.+.+|..+. . +
T Consensus 309 -~~~~~~~-~~l~~~gi~v~~g~~~~-------------------------------------------------~--~- 334 (384)
T 3zrp_A 309 -ADPQKVL-AGTVNEGVEFAPGVHPA-------------------------------------------------F--K- 334 (384)
T ss_dssp -SCHHHHH-HHHHTTTCCCEECCCTT-------------------------------------------------C--C-
T ss_pred -CCHHHHH-HHHHHCCEEEecCCCCC-------------------------------------------------c--C-
Confidence 1344444 44555699999876321 1 2
Q ss_pred CCCCCceeEEEEee--cChHHHHHHHHHHHHHHHHHH
Q psy13922 471 GQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 471 ~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~~~ 505 (509)
++|+++. ++++++++++++|+++++++.
T Consensus 335 -------~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 335 -------YFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp -------EEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred -------EEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 8999988 799999999999999998764
No 100
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.97 E-value=4.6e-29 Score=252.01 Aligned_cols=321 Identities=13% Similarity=0.080 Sum_probs=226.4
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCC-CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYT-DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~-~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g 100 (509)
|+...|+.+++++.+.+.. ..|+ ...+..++|+.+++++ |.+.++++|++|+|+++++..+++.+.+
T Consensus 7 gp~~~~~~v~~a~~~~~~~------~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~t~g~t~a~~~~~~~~~~-- 74 (353)
T 2yrr_A 7 GPTPIPERVQKALLRPMRG------HLDPEVLRVNRAIQERLAALF----DPGEGALVAALAGSGSLGMEAGLANLDR-- 74 (353)
T ss_dssp SSCCCCHHHHGGGGSCCCC------TTCHHHHHHHHHHHHHHHHHH----CCCTTCEEEEESSCHHHHHHHHHHTCSC--
T ss_pred CCCCCCHHHHHHHhccccc------ccCHHHHHHHHHHHHHHHHHh----CCCCCCceEEEcCCcHHHHHHHHHHhcC--
Confidence 3445678888887666543 1132 2345677888888887 5444567899999999999999999876
Q ss_pred CCCCCeEEEcCCCChhH--HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 101 DGKKPGVLIPIPQYPLY--SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
| +|+++.|.|+++ ...++..|++++.++.+++ +.+|++.|++.+++. ++++|++++|+||||.+++
T Consensus 75 d----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~-- 142 (353)
T 2yrr_A 75 G----PVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPG--EPVDPEAVARALKRR----RYRMVALVHGETSTGVLNP-- 142 (353)
T ss_dssp C----CEEEEECSHHHHHHHHHHHHTTCCEEEEECCTT--SCCCHHHHHHHHHHS----CCSEEEEESEETTTTEECC--
T ss_pred C----cEEEEcCCCchHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHHhC----CCCEEEEEccCCCcceecC--
Confidence 6 899999999875 4556778999999998754 578999999999863 5899999999999999998
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
+++|.++|+++|+++|+|++|.... ...++..+ + . .+++.|++|.+.|.+| +||++ .++
T Consensus 143 -~~~i~~l~~~~~~~li~D~a~~~~~-----~~~~~~~~----~-----~-d~~~~s~~K~~~~~~g--~G~~~---~~~ 201 (353)
T 2yrr_A 143 -AEAIGALAKEAGALFFLDAVTTLGM-----LPFSMRAM----G-----V-DYAFTGSQKCLSAPPG--LAPIA---ASL 201 (353)
T ss_dssp -HHHHHHHHHHHTCEEEEECTTTTTT-----SCCCHHHH----T-----C-SEEECCTTSTTCCCSS--CEEEE---ECH
T ss_pred -HHHHHHHHHHcCCeEEEEcCccccc-----cccccccc----C-----c-eEEEecCcccccCCCc--eEEEE---ECH
Confidence 7899999999999999999996421 12233322 1 1 2445689996635556 69998 688
Q ss_pred HHHHHHHH-------------hh--h-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCC
Q psy13922 259 GVKAMLHK-------------SI--S-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNP 322 (509)
Q Consensus 259 ~~~~~l~~-------------~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 322 (509)
++++.+.. .. . ..++++.. .+.++..++
T Consensus 202 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~al-- 245 (353)
T 2yrr_A 202 EARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVL----------------------------------LHYALLEAL-- 245 (353)
T ss_dssp HHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHH----------------------------------HHHHHHHHH--
T ss_pred HHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHH----------------------------------HHHHHHHHH--
Confidence 88776631 00 0 01112222 233333222
Q ss_pred CCCCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCeeccCC--ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHH
Q psy13922 323 PQPGEPSYEQFSRE-KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ--GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAF 399 (509)
Q Consensus 323 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 399 (509)
+.+.++ ++++++.++++++++.+.|+++ |+++..+. +++++|++++ . +. +..++.
T Consensus 246 --------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--~---------~~-~~~~~~- 303 (353)
T 2yrr_A 246 --------DLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPP--E---------GV-DADRLV- 303 (353)
T ss_dssp --------HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECC--T---------TC-CHHHHH-
T ss_pred --------HHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECC--C---------CC-CHHHHH-
Confidence 222222 6778889999999999999988 88877654 6667776653 1 22 234444
Q ss_pred HHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeE
Q psy13922 400 ELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHF 479 (509)
Q Consensus 400 ~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (509)
+.|.++||.+.||..|.. .+ ++
T Consensus 304 ~~l~~~gi~v~~g~~~~~------------------------------------------------~~----------~i 325 (353)
T 2yrr_A 304 RALYAEGVAVAGGIGPTR------------------------------------------------GQ----------VL 325 (353)
T ss_dssp HHHHHTTEECEECCGGGT------------------------------------------------TT----------CE
T ss_pred HHHHHCCEEEeCCccccC------------------------------------------------CC----------eE
Confidence 445556999999875433 23 89
Q ss_pred EEEee--cChHHHH-HHHHHHHHHHHH
Q psy13922 480 RTTIL--PQPEKLK-AMLEKFREFHEE 503 (509)
Q Consensus 480 Rls~~--~~~~~i~-~~~~~l~~~~~~ 503 (509)
|+++. .++++++ +++++|++++++
T Consensus 326 Ri~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 326 RLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp EEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred EEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 99984 7888898 999999988753
No 101
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=1.7e-28 Score=251.72 Aligned_cols=352 Identities=11% Similarity=0.078 Sum_probs=232.0
Q ss_pred CCCCCCC--CCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH
Q psy13922 18 PQLFDDP--RFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL 95 (509)
Q Consensus 18 ~~~~~~~--~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 95 (509)
|..++.. ..++.+.+++.+.+...... |....+..++++++++++.+.+| .++++|++|+|+++++..++++
T Consensus 32 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~ 105 (397)
T 3f9t_A 32 GNIFGSMCSNVLPITRKIVDIFLETNLGD----PGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRC 105 (397)
T ss_dssp TCBCSCSCCCCCTHHHHHHHHHTTCCTTS----GGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHH
T ss_pred CCeEEEecCCCcHHHHHHHHHHHhhcCCC----cccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHH
Confidence 3445433 34678999998888762211 22223557777777777777766 4678999999999999999999
Q ss_pred hhcC---------CCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeC
Q psy13922 96 LIED---------VDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN 166 (509)
Q Consensus 96 l~~~---------gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~ 166 (509)
+..+ +.++++.|+++.|+|.++...++..|.+++.++.+++ +.+|++.|++.+++. ++++|++++
T Consensus 106 ~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~----~~~~v~~~~ 179 (397)
T 3f9t_A 106 IKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKED--YTIDEKFVKDAVEDY----DVDGIIGIA 179 (397)
T ss_dssp HHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTT--SSBCHHHHHHHHHHS----CCCEEEEEB
T ss_pred HHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCC--CcCCHHHHHHHHhhc----CCeEEEEEC
Confidence 9876 1112239999999999999999999999999998754 588999999999874 589999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCC
Q psy13922 167 PGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGL 246 (509)
Q Consensus 167 p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Gl 246 (509)
|+||||.+.+ +++|.++|++||+++|+||+|..+.+.......++..+........ + ..+++.|++|.+ + +|.
T Consensus 180 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~s~~K~~-~-~~~ 252 (397)
T 3f9t_A 180 GTTELGTIDN---IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-G-VDSITIDPHKMG-H-CPI 252 (397)
T ss_dssp SCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-T-CSEEECCTTTTT-C-CCS
T ss_pred CCCCCCCCCC---HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-c-CCeEEEcccccc-C-CCC
Confidence 9999999977 8889999999999999999998765432111000000000000000 1 134566999987 3 788
Q ss_pred eeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCC
Q psy13922 247 RGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPG 326 (509)
Q Consensus 247 r~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 326 (509)
|+|++++ .++.+.+.+............. .+......... .++.+....+
T Consensus 253 ~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~---------------~~~~a~~~~~------ 302 (397)
T 3f9t_A 253 PSGGILF--KDIGYKRYLDVDAPYLTETRQA-------TILGTRVGFGG---------------ACTYAVLRYL------ 302 (397)
T ss_dssp SCEEEEE--SSGGGGGGTCEECTTSSSSEEC-------SSCSSCCSHHH---------------HHHHHHHHHH------
T ss_pred CceEEEE--eCHHHHHhhccCCccccCCCcc-------ccccccccchH---------------HHHHHHHHHH------
Confidence 9999975 6666665543221111110000 00000000000 0222211111
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 327 EPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
...++++..+.++++++++.+.|+++ ++.+..+..+.++|+++. .... +.+.|.++|
T Consensus 303 ------~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~---------------~~~~-~~~~l~~~g 359 (397)
T 3f9t_A 303 ------GREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDE---------------DYKE-VCKKLRDRG 359 (397)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECT---------------THHH-HHHHHHHTT
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeC---------------CHHH-HHHHHHhCC
Confidence 12236777888889999999999998 888654444445555443 1233 345555669
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-- 484 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-- 484 (509)
|.+.+|.. ++ ++|+++.
T Consensus 360 i~v~~~~~---------------------------------------------------~~----------~~Ri~~~~~ 378 (397)
T 3f9t_A 360 IYVSVCNC---------------------------------------------------VK----------ALRIVVMPH 378 (397)
T ss_dssp CBCEECSS---------------------------------------------------SS----------EEEEECCTT
T ss_pred eEEeccCC---------------------------------------------------CC----------EEEEEEcCC
Confidence 99987652 22 8999998
Q ss_pred cChHHHHHHHHHHHHHHH
Q psy13922 485 PQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~ 502 (509)
++++++++++++|+++++
T Consensus 379 ~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 379 IKREHIDNFIEILNSIKR 396 (397)
T ss_dssp CCHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHhhC
Confidence 699999999999998764
No 102
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.97 E-value=1.1e-28 Score=254.76 Aligned_cols=327 Identities=13% Similarity=0.125 Sum_probs=231.4
Q ss_pred CHHHHHHHHHHHhcccCC-CcccC--CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQ-SVGSY--TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~-~~~~Y--~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
|+.+.+++.+.+...... ....| +...+..++++++++++ | ++ +.|++++| ++++..++++++++||
T Consensus 61 ~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g--~~-~~i~~~sG-s~a~~~~~~~~~~~gd-- 130 (401)
T 1fc4_A 61 HPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL----G--ME-DAILYSSC-FDANGGLFETLLGAED-- 130 (401)
T ss_dssp CHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH----T--CS-EEEEESCH-HHHHHTTHHHHCCTTC--
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh----C--CC-cEEEeCCh-HHHHHHHHHHHcCCCC--
Confidence 789999999888763211 11123 23567789999999998 3 23 55655555 6799999999998888
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
.|+++.|+|..+...++..|.+++.++. .|++.|++.+++..+. .++++|++++|+||||.+++ +++
T Consensus 131 --~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---~~~ 198 (401)
T 1fc4_A 131 --AIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN---LKG 198 (401)
T ss_dssp --EEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC---HHH
T ss_pred --EEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC---HHH
Confidence 9999999999998899999999998872 4789999988753211 15889999999999999999 899
Q ss_pred HHHHHHHCCcEEEEcccCC-cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 183 IIKFAHREKLFLFADEVYQ-DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
|.++|+++|+++|+||+|+ ++....+. .+.+.. ++. ....++++|+||.++ ++. +||++ .+++++
T Consensus 199 i~~l~~~~~~~li~De~~~~g~~~~~g~---~~~~~~-~~~----~~~di~~~s~sK~~~--~~~-gG~~~---~~~~~~ 264 (401)
T 1fc4_A 199 VCDLADKYDALVMVDDSHAVGFVGENGR---GSHEYC-DVM----GRVDIITGTLGKALG--GAS-GGYTA---ARKEVV 264 (401)
T ss_dssp HHHHHHHTTEEEEEECTTTTTTSSTTSC---CHHHHT-TCT----TCCSEEEEESSSTTC--SSS-CEEEE---ECHHHH
T ss_pred HHHHHHHcCCEEEEECcccccccCCCCC---ccHHHc-CCC----cCCcEEEecchhhcc--CCC-CEEEE---cCHHHH
Confidence 9999999999999999995 76532111 121111 111 112577889999994 233 49998 689999
Q ss_pred HHHHHhhhc---ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 262 AMLHKSISA---MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 262 ~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+.+...... ..+.+.+ .++++...++ ..++.+
T Consensus 265 ~~l~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~-----------~~~~~~ 299 (401)
T 1fc4_A 265 EWLRQRSRPYLFSNSLAPA----------------------------------IVAASIKVLE-----------MVEAGS 299 (401)
T ss_dssp HHHHHHCHHHHHSCCCCHH----------------------------------HHHHHHHHHH-----------HHHTCH
T ss_pred HHHHHhCcCceeCCCCCHH----------------------------------HHHHHHHHHH-----------HHhcCH
Confidence 988765421 2244444 3333333322 111135
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQV 418 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~ 418 (509)
+.++.++++++.+.+.|+++ ++++.+ ..+.++|++++-.. +...+ ...|.++||.+.||..|+.+
T Consensus 300 ~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~------------~~~~l-~~~l~~~gi~v~~~~~~~~~ 364 (401)
T 1fc4_A 300 ELRDRLWANARQFREQMSAA-GFTLAG-ADHAIIPVMLGDAV------------VAQKF-ARELQKEGIYVTGFFYPVVP 364 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCBCC-SSSSEEEEEEECHH------------HHHHH-HHHHHHTTEECCEECTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCcccC-CCCCEEEEEcCChH------------HHHHH-HHHHHHCCcEEeeecCCCCC
Confidence 77888899999999999988 887774 45666776664111 13333 34455669999998876651
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEK 496 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~ 496 (509)
.+.+ ++|+++. .+++++++++++
T Consensus 365 -----------------------------------------------~~~~--------~iRi~~~~~~~~~~i~~~~~~ 389 (401)
T 1fc4_A 365 -----------------------------------------------KGQA--------RIRTQMSAAHTPEQITRAVEA 389 (401)
T ss_dssp -----------------------------------------------TTCE--------EEEEECCTTCCHHHHHHHHHH
T ss_pred -----------------------------------------------CCCc--------eEEEEeCCCCCHHHHHHHHHH
Confidence 1222 8999998 799999999999
Q ss_pred HHHHHHHH
Q psy13922 497 FREFHEEF 504 (509)
Q Consensus 497 l~~~~~~~ 504 (509)
|+++++++
T Consensus 390 l~~~~~~~ 397 (401)
T 1fc4_A 390 FTRIGKQL 397 (401)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998764
No 103
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.97 E-value=1.4e-29 Score=258.27 Aligned_cols=335 Identities=14% Similarity=0.107 Sum_probs=225.5
Q ss_pred CCCCCHHHHHHHHHHHhcccC-----CCcccCCCCcchHHHHHH-HHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRG-----QSVGSYTDSPGIEIIRRH-VAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~-----~~~~~Y~~~~g~~~lr~~-va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
....|+.+++++.+.+..... .....|.+..+..++++. ++++++ .+ +|++|+|+++++..+++++
T Consensus 18 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~~~~g~t~a~~~~~~~~ 89 (371)
T 2e7j_A 18 GGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VARVTNGAREAKFAVMHSL 89 (371)
T ss_dssp TCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEEEESSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEEEeCChHHHHHHHHHHH
Confidence 344688999999888876210 011225567788999999 999983 22 9999999999999999999
Q ss_pred hcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEe--cCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 97 IEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYY--LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
+++|| .|+++.|+|.++...++..|++++.++ .++ ++.+|++.|++.+++....+++++|++++|+||||.+
T Consensus 90 ~~~gd----~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~ 163 (371)
T 2e7j_A 90 AKKDA----WVVMDENCHYSSYVAAERAGLNIALVPKTDYP--DYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNL 163 (371)
T ss_dssp CCTTC----EEEEETTCCHHHHHHHHHTTCEEEEECCCCTT--TCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCC
T ss_pred hCCCC----EEEEccCcchHHHHHHHHcCCeEEEeecccCC--CCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCccc
Confidence 98888 999999999999999999999999999 654 3689999999999842111278999999999999999
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
++ +++|.++|+++|+++|+|++|..+... .++..+ +. .++++|+||.+ | ++.|+||++
T Consensus 164 ~~---~~~i~~~~~~~~~~li~D~a~~~~~~~-----~~~~~~----~~------di~~~s~sK~~-~-~~~~~G~~~-- 221 (371)
T 2e7j_A 164 PD---VKKIAKVCSEYDVPLLVNGAYAIGRMP-----VSLKEI----GA------DFIVGSGHKSM-A-ASGPIGVMG-- 221 (371)
T ss_dssp CC---HHHHHHHHHTTTCCEEEECTTTBTTBC-----CCHHHH----TC------SEEEEEHHHHS-S-CCSSCEEEE--
T ss_pred CC---HHHHHHHHHHcCCeEEEECccccCCCC-----CChhhc----CC------CEEEecCCcCC-C-CCCCcEEEE--
Confidence 98 699999999999999999999985431 233322 11 36678999998 4 445999998
Q ss_pred cCCHHHHHH-HHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHH
Q psy13922 255 NLDPGVKAM-LHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQF 333 (509)
Q Consensus 255 ~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 333 (509)
.++++++. +............ +..+........++..+++ +
T Consensus 222 -~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~a~~~~l~-----------~ 263 (371)
T 2e7j_A 222 -MKEEWAEIVLRRSEKYKNKEVE--------------------------LLGCTARGATIITLMASFP-----------H 263 (371)
T ss_dssp -ECTTTTTTTTCBCSSCTTSBGG--------------------------GTTCCCCSHHHHHHHHHHH-----------H
T ss_pred -EechhhhhhccccccCcccccc--------------------------cccCCcCHHHHHHHHHHHH-----------H
Confidence 56766665 5433221000000 0000000012222222211 1
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHhcCCCCeeccCC--ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE
Q psy13922 334 SREKQSVLDSL--KQRAKMVADTFNSIEGMSCNPVQ--GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI 409 (509)
Q Consensus 334 ~~~~~~~~~~~--~~~~~~l~~~L~~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 409 (509)
... ++++.+ +++++++.+.|+++ ++++..+. .+.++|++++ . ..+ +.+.|.++||.+
T Consensus 264 ~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~--~-------------~~~-~~~~l~~~gi~~ 324 (371)
T 2e7j_A 264 VRE--RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE--V-------------LYE-ISKKAKGGRFFL 324 (371)
T ss_dssp HHH--HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH--H-------------HHH-HHHHSSSGGGHH
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC--C-------------HHH-HHHHHHHCCEEE
Confidence 111 456667 78888999999988 88887653 3446776653 1 223 345555889998
Q ss_pred ecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEE-EEee---c
Q psy13922 410 VPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFR-TTIL---P 485 (509)
Q Consensus 410 ~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R-ls~~---~ 485 (509)
.| ..|... ..| ...+ ++| ++++ .
T Consensus 325 ~~-~~~~~~----------------------------------------~~g----~~~~--------~iRii~~~~~~~ 351 (371)
T 2e7j_A 325 YR-ELKSRK----------------------------------------IHG----IKPG--------LTRYFKLSTYGL 351 (371)
T ss_dssp HH-HHHHTT----------------------------------------EEC----SCTT--------CCSEEEEECTTC
T ss_pred Ee-cccccc----------------------------------------ccC----CCCC--------ceEEEEeeccCC
Confidence 86 322110 000 0112 899 9999 6
Q ss_pred ChHHHHHHHHHHHHHHHH
Q psy13922 486 QPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 486 ~~~~i~~~~~~l~~~~~~ 503 (509)
+++++++++++|++++++
T Consensus 352 ~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 352 SDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 899999999999998865
No 104
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.96 E-value=1.7e-29 Score=262.98 Aligned_cols=332 Identities=11% Similarity=0.067 Sum_probs=219.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHH---HhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLK---LLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~---~l~~~gd~~ 103 (509)
|+.+++++.+++........ .|.+..+..++++++++++. | + .+++|++|+|+++++..+++ .+.+++
T Consensus 59 ~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~~a~~~~~~~a~~~~~~~--- 129 (426)
T 1sff_A 59 HPKVVAAVEAQLKKLSHTCF-QVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGSEAVENAVKIARAATKRS--- 129 (426)
T ss_dssp CHHHHHHHHHHTTTCSCCCT-TTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHHHHHHHHHHHHHHHHTCC---
T ss_pred CHHHHHHHHHHHHhCCCccc-cccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchHHHHHHHHHHHHHhhCCC---
Confidence 68899999999876322222 36777888999999999983 2 2 34899999999999999988 666554
Q ss_pred CCeEEEcCCCChhHHH-HHHhcCCE-------------EEEEecCCC---CCCCCCHHHHHHHHHhhhccCCceEEEE-e
Q psy13922 104 KPGVLIPIPQYPLYSA-SLAEFNME-------------QIGYYLDES---KQWGLPISELERSITEARKHCNPRAIVI-I 165 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~-~~~~~g~~-------------~~~v~~~~~---~~~~~d~~~L~~~i~~~~~~~~~~~ivi-~ 165 (509)
.|++++|+|+++.. .+...|.+ ++.++.+.. ..+.+|++.|++.+++.....++++|++ +
T Consensus 130 --~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p 207 (426)
T 1sff_A 130 --GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEP 207 (426)
T ss_dssp --EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECS
T ss_pred --eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEec
Confidence 89999999987654 55555543 666666431 1234789999999974100015788887 4
Q ss_pred CCCCCCC-CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC
Q psy13922 166 NPGNPTG-QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC 244 (509)
Q Consensus 166 ~p~NPtG-~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~ 244 (509)
+++| || ..+|++++++|.++|++||++||+||+|.+|.+.+. ..++.. .+. .+.+.||||.+ |.
T Consensus 208 ~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~--~~~--------~~di~s~sK~~-~~- 272 (426)
T 1sff_A 208 VQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT--LFAMEQ--MGV--------APDLTTFAKSI-AG- 272 (426)
T ss_dssp BCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGG--TTS--------CCSEEEECGGG-GT-
T ss_pred ccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccc--hhhhhh--cCC--------CCCEEEEcccc-cC-
Confidence 7788 99 789999999999999999999999999998866542 212111 011 11144899999 64
Q ss_pred CCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCC
Q psy13922 245 GLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPP 323 (509)
Q Consensus 245 Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~ 323 (509)
|+|+||++ .++++++.+..... ...+.+.+ +++++..+++
T Consensus 273 GlriG~~~---~~~~~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~aal~-- 313 (426)
T 1sff_A 273 GFPLAGVT---GRAEVMDAVAPGGLGGTYAGNPI----------------------------------ACVAALEVLK-- 313 (426)
T ss_dssp SSCCEEEE---EEHHHHTTSCTTSBCCSSSSCHH----------------------------------HHHHHHHHHH--
T ss_pred CCceEEEE---EcHHHHhhhccCCcCcCCCCCHH----------------------------------HHHHHHHHHH--
Confidence 99999998 67888877653222 23344555 3333332221
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCeeccCCceeEEeecCCC------CHHHHHHHhhcCCCC
Q psy13922 324 QPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS----IEGMSCNPVQGAMYAFPQMKL------PAKAIAKAKAEGKCP 393 (509)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~g~~~ 393 (509)
+.+ ...+.+.++++++.+.+.|++ ++.+....+. |.++|+++.- |.. .+
T Consensus 314 ---------~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~----------~~ 372 (426)
T 1sff_A 314 ---------VFE-QENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHNKPDA----------KL 372 (426)
T ss_dssp ---------HHH-HTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEE-TTEEEEEEBGGGCTTSBCH----------HH
T ss_pred ---------HHH-hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCCh----------HH
Confidence 000 012334444555555555544 3333334455 6677877741 110 01
Q ss_pred cHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCC
Q psy13922 394 SVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQV 473 (509)
Q Consensus 394 ~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (509)
...+... |.++||.+.||..+..
T Consensus 373 ~~~l~~~-l~~~gi~v~~~~~~~~-------------------------------------------------------- 395 (426)
T 1sff_A 373 TAEIVAR-ARDKGLILLSCGPYYN-------------------------------------------------------- 395 (426)
T ss_dssp HHHHHHH-HHHTTEECEEESTTSC--------------------------------------------------------
T ss_pred HHHHHHH-HHHCCcEEecCCCCCC--------------------------------------------------------
Confidence 3344444 4467999998764322
Q ss_pred CCceeEEEEee--cChHHHHHHHHHHHHHHHHHH
Q psy13922 474 PGTYHFRTTIL--PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 474 ~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~~~ 505 (509)
++|+++. .+++++++++++|++++++++
T Consensus 396 ----~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 425 (426)
T 1sff_A 396 ----VLRILVPLTIEDAQIRQGLEIISQCFDEAK 425 (426)
T ss_dssp ----EEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred ----EEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 8999885 899999999999999987654
No 105
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.96 E-value=8.8e-29 Score=250.26 Aligned_cols=320 Identities=15% Similarity=0.118 Sum_probs=225.0
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
|+...|+.+++++.+.+.. . ..|....+..++|+.+++++ | +++++|++|+|+++++..+++++.++||
T Consensus 8 ~p~~~~~~v~~a~~~~~~~----~-~~~~~~~~~~~l~~~la~~~----g--~~~~~i~~~~g~t~a~~~~~~~~~~~gd 76 (352)
T 1iug_A 8 GPVRLHPKALEALARPQLH----H-RTEAAREVFLKARGLLREAF----R--TEGEVLILTGSGTLAMEALVKNLFAPGE 76 (352)
T ss_dssp SSCCCCHHHHHHHHSCCCC----T-TSHHHHHHHHHHHHHHHHHH----T--CSSEEEEEESCHHHHHHHHHHHHCCTTC
T ss_pred CCCCCCHHHHHHhccCCCC----c-cCHHHHHHHHHHHHHHHHHh----C--CCCceEEEcCchHHHHHHHHHhccCCCC
Confidence 3445688898888776542 1 11222346688999999888 3 4468999999999999999999998888
Q ss_pred CCCCeEEEcCCCChhHH--HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 102 GKKPGVLIPIPQYPLYS--ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
.|+++.|+|.++. ..++..|++++.++.+++ +.+|++.|++ + ++++|++++|+||||.+++
T Consensus 77 ----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~---~-----~~~~v~~~~~~nptG~~~~--- 139 (352)
T 1iug_A 77 ----RVLVPVYGKFSERFYEIALEAGLVVERLDYPYG--DTPRPEDVAK---E-----GYAGLLLVHSETSTGALAD--- 139 (352)
T ss_dssp ----EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCTTTSCC---S-----SCSEEEEESEETTTTEECC---
T ss_pred ----eEEEEeCCchhHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHhc---c-----CCcEEEEEEecCCcceecC---
Confidence 9999999999865 445668999999998754 4678888876 3 7899999999999999988
Q ss_pred HHHHHHHHHHC--CcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 180 IQDIIKFAHRE--KLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 180 l~~l~~ia~~~--~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++|.++|+++ |+++|+|++|..... ...+. +.+ ..+++.|+||.+.|.+| +||++ .+
T Consensus 140 l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~----~~~------~d~~~~s~~K~~~~~~g--~G~~~---~~ 199 (352)
T 1iug_A 140 LPALARAFKEKNPEGLVGADMVTSLLVG-----EVALE----AMG------VDAAASGSQKGLMCPPG--LGFVA---LS 199 (352)
T ss_dssp HHHHHHHHHHHCTTCEEEEECTTTBTTB-----CCCSG----GGT------CSEEEEESSSTTCCCSC--EEEEE---EC
T ss_pred HHHHHHHHHhhCCCCEEEEECCccccCc-----ceecc----ccC------eeEEEecCcccccCCCc--eeEEE---EC
Confidence 78999999999 999999999974211 11111 111 13557799995534444 79987 57
Q ss_pred HHHHHH---------HHHh---h---hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCC
Q psy13922 258 PGVKAM---------LHKS---I---SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNP 322 (509)
Q Consensus 258 ~~~~~~---------l~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 322 (509)
+++++. +... . ...+.++.. .+.++..+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~al~- 244 (352)
T 1iug_A 200 PRALERLKPRGYYLDLARELKAQKEGESAWTPAIN----------------------------------LVLAVAAVLE- 244 (352)
T ss_dssp HHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHH----------------------------------HHHHHHHHHH-
T ss_pred HHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHH----------------------------------HHHHHHHHHH-
Confidence 776654 2110 0 011222332 3333333221
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC-ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHH
Q psy13922 323 PQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ-GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFEL 401 (509)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 401 (509)
...++++++++.++++++++.+.|+++ |+++..+. .+.++|++++ . +. +..++. +.
T Consensus 245 ---------~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--~---------~~-~~~~~~-~~ 301 (352)
T 1iug_A 245 ---------EVLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLP--E---------GV-PYARVK-EA 301 (352)
T ss_dssp ---------HHGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECC--T---------TC-CHHHHH-HH
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcC--C---------CC-CHHHHH-HH
Confidence 122226778889999999999999998 88887664 6667776653 1 22 234444 44
Q ss_pred HhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEE
Q psy13922 402 LERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRT 481 (509)
Q Consensus 402 l~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rl 481 (509)
|.++||.+.||..+. +.+ ++|+
T Consensus 302 l~~~gi~v~~~~~~~--------------------------------------------------~~~--------~iRi 323 (352)
T 1iug_A 302 FAQRGAVIAGGQGPL--------------------------------------------------KGK--------VFRL 323 (352)
T ss_dssp HHTTTEECEECCGGG--------------------------------------------------TTT--------EEEE
T ss_pred HHHCCEEEEeCCCcc--------------------------------------------------CCC--------EEEE
Confidence 556699999887221 112 8999
Q ss_pred Eee--cChHHHHHHHHHHHHHHHHHH
Q psy13922 482 TIL--PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 482 s~~--~~~~~i~~~~~~l~~~~~~~~ 505 (509)
++. ++++++++++++|++++++..
T Consensus 324 ~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 324 SLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred EccccCCHHHHHHHHHHHHHHHHHhc
Confidence 998 579999999999999987764
No 106
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.96 E-value=3e-28 Score=246.79 Aligned_cols=324 Identities=13% Similarity=0.105 Sum_probs=229.4
Q ss_pred CCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCC
Q psy13922 25 RFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKK 104 (509)
Q Consensus 25 ~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~ 104 (509)
..|+.+++++.+.+.. |.+..|..++++++++++.+.+| .++++|++|+|+++++..+++.++++||
T Consensus 25 ~~~~~v~~a~~~~~~~--------~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~~~~~~~~~~~gd--- 91 (359)
T 1svv_A 25 GMHPKILDLMARDNMT--------QHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTNLIACSLALRPWE--- 91 (359)
T ss_dssp CCCHHHHHHHHHHTTC--------CCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHHHHHHHHHCCTTE---
T ss_pred CCCHHHHHHHHHHHhh--------ccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHHHHHHHHHhCCCC---
Confidence 4678999999888764 66666777888999988888877 5678999999999999999999998888
Q ss_pred CeEEEcCCCChhHHH--HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh--ccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 105 PGVLIPIPQYPLYSA--SLAEFNMEQIGYYLDESKQWGLPISELERSITEAR--KHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~--~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
.|+++.|+|.++.. .++..|.+++.++.+ ++.+|++.|++.+++.. ...++++|++++| ||||.+++.+++
T Consensus 92 -~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l 166 (359)
T 1svv_A 92 -AVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQEL 166 (359)
T ss_dssp -EEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHH
T ss_pred -EEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHH
Confidence 99999999999887 478889999999975 46899999999998720 0012899999999 799999999999
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGV 260 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~ 260 (509)
++|+++|+++|+++|+||+|.++..+..........+... . -++..|.+|.. | ..+.|+++ .++++
T Consensus 167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-------~-d~~~~s~~K~g-~--~~~~g~l~---~~~~~ 232 (359)
T 1svv_A 167 EDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARL-------T-DMFYIGATKAG-G--MFGEALII---LNDAL 232 (359)
T ss_dssp HHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHH-------C-SEEEEECTTTT-C--SSCEEEEE---CSGGG
T ss_pred HHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhc-------C-CEEEEecccCC-C--CCceEEEE---EcccH
Confidence 9999999999999999999965533211111111111011 1 23455889975 3 25678887 68888
Q ss_pred HHHHHHhhh--ccc-CcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 261 KAMLHKSIS--AML-CPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 261 ~~~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
++.+..... ... ..+.. ...++..++. +. ..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~l~---------~~---~~ 266 (359)
T 1svv_A 233 KPNARHLIKQRGALMAKGWL----------------------------------LGIQFEVLMK---------DN---LF 266 (359)
T ss_dssp CTTHHHHHHHTTCCCTTTHH----------------------------------HHHHHHHHTS---------TT---HH
T ss_pred HHHHHHHHhcCCcccccchh----------------------------------hHHHHHHHHh---------hh---hH
Confidence 777765421 111 11111 0011111222 10 14
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+++++.++++++++.+.| +.+++++..+.+++++|++++ .++...+++++||.+. +.
T Consensus 267 ~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~~gi~v~-----~~ 323 (359)
T 1svv_A 267 FELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE-----------------NTMIAELNNDFDMYTV-----EP 323 (359)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE-----------------HHHHHHHTTTEECEEE-----EE
T ss_pred HHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC-----------------HHHHHHHHHhcCEEEE-----ec
Confidence 667788888999999999 556888887788888886543 1334555555599983 21
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLE 495 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~ 495 (509)
.+ .+ ..++|+++. .++++++++++
T Consensus 324 ~~----------------------------------------------~~--------~~~iRi~~~~~~~~~~i~~~~~ 349 (359)
T 1svv_A 324 LK----------------------------------------------DG--------TCIMRLCTSWATEEKECHRFVE 349 (359)
T ss_dssp ET----------------------------------------------TT--------EEEEEEECCTTCCHHHHHHHHH
T ss_pred cc----------------------------------------------CC--------CceEEEEccCcCCHHHHHHHHH
Confidence 00 11 128999876 79999999999
Q ss_pred HHHHHHHH
Q psy13922 496 KFREFHEE 503 (509)
Q Consensus 496 ~l~~~~~~ 503 (509)
+|++++++
T Consensus 350 ~l~~~~~~ 357 (359)
T 1svv_A 350 VLKRLVAS 357 (359)
T ss_dssp HHHHC---
T ss_pred HHHHHHhc
Confidence 99988764
No 107
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.96 E-value=6.3e-28 Score=247.53 Aligned_cols=346 Identities=12% Similarity=0.078 Sum_probs=227.5
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCC--CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTD--SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~--~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
++..+|+.+++++.+.+.. .|.+ .....++++.+++++ +.+ ..++|++|+|+++++..+++++.++
T Consensus 30 ~p~~~~~~v~~a~~~~~~~-------~~~~~~~~~~~~l~~~la~~~----~~~-~~~~v~~~~gg~~al~~~~~~~~~~ 97 (393)
T 3kgw_A 30 GPSNLAPRVLAAGSLRMIG-------HMQKEMLQIMEEIKQGIQYVF----QTR-NPLTLVVSGSGHCAMETALFNLLEP 97 (393)
T ss_dssp SCCCCCHHHHHHTTCCCCC-------TTSHHHHHHHHHHHHHHHHHH----TCC-CSEEEEESCCTTTHHHHHHHHHCCT
T ss_pred CCCCCCHHHHHHhcccccC-------cccHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEeCCcHHHHHHHHHhcCCC
Confidence 3334577887777542211 1221 223455666666666 432 3336999999999999999999999
Q ss_pred CCCCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 100 VDGKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
|| .|+++.++|.+ +...++..|.+++.++.+++ +.+|++.|++.+++. ++++|++++|+||||.+++
T Consensus 98 gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~- 166 (393)
T 3kgw_A 98 GD----SFLTGTNGIWGMRAAEIADRIGARVHQMIKKPG--EHYTLQEVEEGLAQH----KPVLLFLVHGESSTGVVQP- 166 (393)
T ss_dssp TC----EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECC-
T ss_pred CC----EEEEEeCCchhHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHhhC----CCcEEEEeccCCcchhhcc-
Confidence 88 99999988863 36778889999999998755 378999999999875 7999999999999999998
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++|.++|++||+++|+||+|...... ..+.. . +. .+++.|+||.+.| +.++||++ .+
T Consensus 167 --l~~i~~l~~~~~~~li~De~~~~g~~~-----~~~~~----~-----~~-d~~~~s~sK~~~~--~~g~g~~~---~~ 224 (393)
T 3kgw_A 167 --LDGFGELCHRYQCLLLVDSVASLGGVP-----IYMDQ----Q-----GI-DIMYSSSQKVLNA--PPGISLIS---FN 224 (393)
T ss_dssp --CTTHHHHHHHTTCEEEEECTTTTTTSC-----CCTTT----T-----TC-CEEEEESSSTTCC--CSSCEEEE---EC
T ss_pred --HHHHHHHHHHcCCEEEEECCccccCcc-----cchhh----c-----CC-CEEEecCcccccC--CCceeEEE---EC
Confidence 889999999999999999998742211 11110 0 11 3556689997743 34589998 68
Q ss_pred HHHHHHHHHhhhcccCcchhhhhcccccc---CCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHH
Q psy13922 258 PGVKAMLHKSISAMLCPTVLALVSLPQLF---DDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFS 334 (509)
Q Consensus 258 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 334 (509)
+++++.+......+... ..........+ ....+ ..+......+.++..++ +...
T Consensus 225 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~a~~~al----------~~~~ 281 (393)
T 3kgw_A 225 DKAKYKVYSRKTKPVSF-YTDITYLAKLWGCEGETRV------------IHHTTPVTSLYCLRESL----------ALIA 281 (393)
T ss_dssp HHHHHHHHTCSSCCSCS-TTCHHHHHHHTTCSSSCCC------------CCCCCCHHHHHHHHHHH----------HHHH
T ss_pred HHHHHHHhccCCCCCce-eecHHHHHHhhhhccccCC------------CCCCCCHHHHHHHHHHH----------HHHH
Confidence 99998887543211000 00000000000 00000 00001111233333222 1111
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC----ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE
Q psy13922 335 R-EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ----GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI 409 (509)
Q Consensus 335 ~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 409 (509)
+ .++++++.++++++.+.+.|+++ ++++..+. .+++.|+.+. . +. +..++...+++++||.+
T Consensus 282 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--~---------~~-~~~~~~~~l~~~~gi~v 348 (393)
T 3kgw_A 282 EQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEIRLPTITTVTVP--A---------GY-NWRDIVSYVLDHFSIEI 348 (393)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEEEEECC--T---------TB-CHHHHHHHHHHHHCEEC
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcCCeEEEEeCC--C---------CC-CHHHHHHHHHHhCCEEE
Confidence 1 26888999999999999999998 88776333 3556665553 1 11 34455566666669999
Q ss_pred ecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe-e--cC
Q psy13922 410 VPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI-L--PQ 486 (509)
Q Consensus 410 ~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~-~--~~ 486 (509)
.||..+.. .+ ++|+++ . .+
T Consensus 349 ~~g~~~~~------------------------------------------------~~----------~iRi~~~~~~~~ 370 (393)
T 3kgw_A 349 SGGLGPTE------------------------------------------------ER----------VLRIGLLGYNAT 370 (393)
T ss_dssp BCCCGGGT------------------------------------------------TT----------EEEEECCGGGCC
T ss_pred eCCcccCC------------------------------------------------CC----------EEEEEecccCCC
Confidence 99874332 23 899998 5 49
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q psy13922 487 PEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 487 ~~~i~~~~~~l~~~~~~~~~ 506 (509)
++++++++++|+++++++.+
T Consensus 371 ~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 371 TENVDRVAEALREALQHCPK 390 (393)
T ss_dssp HHHHHHHHHHHHHHHHHSCB
T ss_pred HHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999987643
No 108
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.96 E-value=6.2e-28 Score=251.86 Aligned_cols=328 Identities=10% Similarity=0.100 Sum_probs=231.4
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCC----CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYT----DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~----~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
.|+.+++++.+++.....+ ...|. ......++++.+++++ |. +++++++++++++..++++++++||
T Consensus 79 ~~~~v~~a~~~~~~~~~~~-~~~~~~~~G~~~~~~~l~~~la~~~----g~----~~~i~~~sGs~a~~~al~~l~~~gd 149 (427)
T 2w8t_A 79 FDPDVIAAGKEALEKFGSG-TCGSRMLNGTFHDHMEVEQALRDFY----GT----TGAIVFSTGYMANLGIISTLAGKGE 149 (427)
T ss_dssp GCHHHHHHHHHHHHHHCSC-CCSCTTTTCCCHHHHHHHHHHHHHH----TC----SEEEEESCHHHHHHHHHHHHSCTTC
T ss_pred CCHHHHHHHHHHHHHhCCC-CcccccccCCcHHHHHHHHHHHHHh----CC----CceEEecCcHHHHHHHHHHhcCCCC
Confidence 3688999999988763221 12233 3344577788888777 42 2556666667799999999998888
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.|+++.|+|.++...++..|.+++.++. .|++.|++.+++... .++++|++++++||||.+++ ++
T Consensus 150 ----~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~-~~~~~v~~~~~~n~tG~~~~---l~ 214 (427)
T 2w8t_A 150 ----YVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPK-EPAKLVVLEGVYSMLGDIAP---LK 214 (427)
T ss_dssp ----EEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCS-SSCEEEEEESEETTTTEECC---HH
T ss_pred ----EEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccC-CCCeEEEEcCCCCCCCCccC---HH
Confidence 9999999999999999999999998873 489999999976311 15889999999999999988 89
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|.++|++||+++|+||+|..+.++. ...++.... ++. ...++++.|+||.+ |++| ||++ ++++++
T Consensus 215 ~l~~l~~~~g~~li~Dea~~~~~~~~--~g~~~~~~~-~~~----~~~di~~~s~sK~~-g~~g---G~v~---~~~~l~ 280 (427)
T 2w8t_A 215 EMVAVAKKHGAMVLVDEAHSMGFFGP--NGRGVYEAQ-GLE----GQIDFVVGTFSKSV-GTVG---GFVV---SNHPKF 280 (427)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTSST--TSCCHHHHT-TCT----TCCSEEEEESSSTT-CSCC---EEEE---ECCTTG
T ss_pred HHHHHHHHcCCEEEEECCccccccCC--CCCchHhhc-CCC----cCCcEEEecchhhh-ccCC---CEEE---eCHHHH
Confidence 99999999999999999999987752 123333321 111 11267788999999 7666 9998 678888
Q ss_pred HHHHHhhh---cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 262 AMLHKSIS---AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 262 ~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
+.+..... .....+.. ..+++..+++ ..++.+
T Consensus 281 ~~l~~~~~~~~~~~~~~~~----------------------------------~~aa~~~al~-----------~~~~~~ 315 (427)
T 2w8t_A 281 EAVRLACRPYIFTASLPPS----------------------------------VVATATTSIR-----------KLMTAH 315 (427)
T ss_dssp GGGGGTCHHHHSSCCCCHH----------------------------------HHHHHHHHHH-----------HHTSCH
T ss_pred HHHHHhcccccccCCCCHH----------------------------------HHHHHHHHHH-----------HHhcCH
Confidence 87765421 11223333 2222222211 111246
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeec-cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCN-PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
++++.++++++++.+.|+++ |+.+. ++..+.++|+.+.... ....+...+ .++||.+.||..|+.
T Consensus 316 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L-~~~Gi~v~~~~~~~~ 381 (427)
T 2w8t_A 316 EKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLEDQE------------QAAMMWQAL-LDGGLYVNMARPPAT 381 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESSHH------------HHHHHHHHH-HHTTEECEEECTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECCHH------------HHHHHHHHH-HHCCeEEeeeCCCCC
Confidence 77888999999999999988 88876 5514456676664111 133444444 455999999887665
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLE 495 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~ 495 (509)
+ .+. .++|+++. +++++++++++
T Consensus 382 ~-----------------------------------------------~~~--------~~lRi~~~~~~t~e~i~~~~~ 406 (427)
T 2w8t_A 382 P-----------------------------------------------AGT--------FLLRCSICAEHTPAQIQTVLG 406 (427)
T ss_dssp C-----------------------------------------------TTC--------EEEEEECCTTCCHHHHHHHHH
T ss_pred C-----------------------------------------------CCC--------eEEEEEeCCCCCHHHHHHHHH
Confidence 1 122 28999999 59999999999
Q ss_pred HHHHHHHHHH
Q psy13922 496 KFREFHEEFL 505 (509)
Q Consensus 496 ~l~~~~~~~~ 505 (509)
+|+++++++.
T Consensus 407 ~l~~~l~~~~ 416 (427)
T 2w8t_A 407 MFQAAGRAVG 416 (427)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 9999987653
No 109
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.96 E-value=9.9e-28 Score=247.92 Aligned_cols=355 Identities=11% Similarity=0.019 Sum_probs=229.0
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCC--cchHHHHHHHHHHHhhhcCCCCCCCc-EEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDS--PGIEIIRRHVAQYISRRDGQPADWQD-VILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~--~g~~~lr~~va~~l~~~~g~~~~~~~-i~~t~G~~~al~~~~~~l~~ 98 (509)
++..+|+.+++++.+.+ ...|.+. ....++++.+++++ |. +.++ +++|+|+++++..+++++.+
T Consensus 20 gp~~~~~~v~~a~~~~~-------~~~~~~~~~~~~~~~~~~la~~~----~~--~~~~~v~~~~sgt~al~~~~~~~~~ 86 (411)
T 3nnk_A 20 GPINADPRVLRAMSSQL-------IGQYDPAMTHYMNEVMALYRGVF----RT--ENRWTMLVDGTSRAGIEAILVSAIR 86 (411)
T ss_dssp SCCCCCHHHHHHHTSCC-------CCTTCHHHHHHHHHHHHHHHHHH----TC--CCSEEEEEESCHHHHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHhhccc-------cccccHHHHHHHHHHHHHHHHHh----CC--CCCcEEEECCCcHHHHHHHHHHhcC
Confidence 34446778877765332 1223221 22345555555555 53 3444 88999999999999999999
Q ss_pred CCCCCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
+|| .|+++.|+|++ +...++..|++++.++.+.+ +.+|++.|++.+++. ++++|++++|+||||.+++
T Consensus 87 ~gd----~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~ 156 (411)
T 3nnk_A 87 PGD----KVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWG--EVFTPDQVEDAVKRI----RPRLLLTVQGDTSTTMLQP 156 (411)
T ss_dssp TTC----EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECC
T ss_pred CCC----EEEEecCCchHHHHHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHhhC----CCeEEEEeCCCCCcceecc
Confidence 988 99999999987 88889999999999998644 578999999999864 7999999999999999988
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
+++|+++|+++|+++|+|+++...... ..+.. ....+++.|+||.+.| +.++|+++ .
T Consensus 157 ---l~~i~~l~~~~~~~li~Dea~~~~~~~-----~~~~~----------~~~d~~~~s~~K~l~~--~~g~g~~~---~ 213 (411)
T 3nnk_A 157 ---LAELGEICRRYDALFYTDATASLGGNP-----LETDV----------WGLDAVSAGMQKCLGG--PSGTSPIT---L 213 (411)
T ss_dssp ---CTTHHHHHHHHTCEEEEECTTTBTTBC-----CCTTT----------TTCSEEECCSTTTTCC--CSSEEEEE---E
T ss_pred ---HHHHHHHHHHcCCEEEEECCcccCCcc-----cchhc----------cCCcEEEecCccccCC--CCceEEEE---E
Confidence 888999999999999999998753221 11110 0114567799998533 34689998 6
Q ss_pred CHHHHHHHHHhhh---cccCcchhhhhccccccCCCCCch-hHHHHH-HHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 257 DPGVKAMLHKSIS---AMLCPTVLALVSLPQLFDDPRFPD-DVKQRA-QAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 257 ~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
++++++.+..... .+.+....+... .. .....+.. ...... ...+..+.....++.++..++ .
T Consensus 214 ~~~~~~~~~~~~~~~~~~~g~~~~gg~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al----------~ 281 (411)
T 3nnk_A 214 SARMEEAIRRRKCVEEGIRTDAHRDGDE-EM-IYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECA----------R 281 (411)
T ss_dssp CHHHHHHHHTTCCCCGGGCCTTCCCCSS-CC-CSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHH----------H
T ss_pred CHHHHHHHhhcccccccccccccccccC-CC-CcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHH----------H
Confidence 8999998876431 000000000000 00 00000000 000000 000011111111333333332 2
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCeeccCCc---eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCe
Q psy13922 332 QFSRE-KQSVLDSLKQRAKMVADTFNSIEGMSCNPVQG---AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGI 407 (509)
Q Consensus 332 ~~~~~-~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI 407 (509)
...++ ++++++.++++++++.+.|+++ ++++..+.+ +.++|+.++ . +. +..++...+++++||
T Consensus 282 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~---------~~-~~~~l~~~l~~~~gi 348 (411)
T 3nnk_A 282 LILQEGLDYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIP--Q---------GI-NGDQARKLMLEDFGI 348 (411)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECC--T---------TC-CHHHHHHHHHHHHSE
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECC--C---------CC-CHHHHHHHHHHhcCe
Confidence 23333 6788899999999999999998 888765543 556665553 1 22 344555666677799
Q ss_pred EEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe-e--
Q psy13922 408 CIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI-L-- 484 (509)
Q Consensus 408 ~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~-~-- 484 (509)
.++||.. . ...+ ++|+++ .
T Consensus 349 ~v~~g~~--~------------------------------------------------~~~~--------~iRi~~~~~~ 370 (411)
T 3nnk_A 349 EIGTSFG--P------------------------------------------------LHGK--------VWRIGTMGYN 370 (411)
T ss_dssp EEEECCG--G------------------------------------------------GTTT--------EEEEECCGGG
T ss_pred EEeCccC--C------------------------------------------------CCCC--------EEEEeCccCc
Confidence 9998742 1 1112 899998 4
Q ss_pred cChHHHHHHHHHHHHHHHHHH
Q psy13922 485 PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~~~~~ 505 (509)
.+++++++++++|+++++++.
T Consensus 371 ~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 371 ARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp CSHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHcC
Confidence 589999999999999987643
No 110
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.96 E-value=1.4e-27 Score=247.43 Aligned_cols=322 Identities=11% Similarity=0.030 Sum_probs=225.4
Q ss_pred CHHHHHHHHHHHhcccCCC---cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQS---VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~---~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~ 103 (509)
|+.+++++.+++.+..... ...|+......++++.+++++ | .+..++++++++++..++++++++||
T Consensus 75 ~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~~~i~~~sGt~a~~~~l~~~~~~gd-- 144 (409)
T 3kki_A 75 HPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT----G----FDECLLSQSGWNANVGLLQTICQPNT-- 144 (409)
T ss_dssp CHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH----T----CSEEEEESCHHHHHHHHHHHHCCTTC--
T ss_pred CHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh----C----CCeEEEecchHHHHHHHHHHhcCCCC--
Confidence 6899999999998743211 122333344567888888877 3 22345555567999999999999998
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
.|+++.|+|..+...+...|++++.++. .|++.|++.+++. ++++|++++|+||||.+++ +++|
T Consensus 145 --~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~----~~~~vi~~~~~nptG~~~~---l~~l 208 (409)
T 3kki_A 145 --NVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRH----GPGIIVVDSIYSTLGTIAP---LAEL 208 (409)
T ss_dssp --EEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHH----CSCEEEEESBCTTTCCBCC---HHHH
T ss_pred --EEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhc----CCeEEEECCCCCCCCCcCC---HHHH
Confidence 9999999999999999999999998764 4899999999874 6899999999999999999 8999
Q ss_pred HHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHH
Q psy13922 184 IKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAM 263 (509)
Q Consensus 184 ~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~ 263 (509)
+++|++||++||+||+|..+.++.. ...+.... ++. ....+++.|+||.+ |.+ +||++ .++++++.
T Consensus 209 ~~la~~~~~~li~De~~~~g~~g~~--g~~~~~~~-~~~----~~~di~~~s~sK~~-~~~---gg~v~---~~~~~~~~ 274 (409)
T 3kki_A 209 VNISKEFGCALLVDESHSLGTHGPN--GAGLLAEL-GLT----REVHFMTASLAKTF-AYR---AGAIW---CNNEVNRC 274 (409)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSSGG--GCCHHHHH-TCG----GGCSEEEEESSSTT-CSS---CEEEE---ESSSGGGT
T ss_pred HHHHHHcCCEEEEECCccccccCCC--CCcchhhc-CCC----CCCCEEEeecchhh-CCC---ceEEE---ECHHHHHH
Confidence 9999999999999999998554321 12222211 110 01146688999999 544 49987 68888877
Q ss_pred HHHhhhc--c-cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHH
Q psy13922 264 LHKSISA--M-LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSV 340 (509)
Q Consensus 264 l~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 340 (509)
+...... + ...+.. ..+++...+ + ..++.+++
T Consensus 275 ~~~~~~~~~~~~~~~~~----------------------------------~~aa~~aal----------~-~~~~~~~~ 309 (409)
T 3kki_A 275 VPFISYPAIFSSTLLPY----------------------------------EAAGLETTL----------E-IIESADNR 309 (409)
T ss_dssp HHHHCHHHHHSBCCCHH----------------------------------HHHHHHHHH----------H-HHHHCHHH
T ss_pred HHHhCcCccccCCCcHH----------------------------------HHHHHHHHH----------H-HHhcCHHH
Confidence 7654321 1 122222 222222221 1 11223678
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCC
Q psy13922 341 LDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPG 420 (509)
Q Consensus 341 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~ 420 (509)
++.++++++++.+.|+++ ++.+. ..+.++|+.+..+. ....+...++ ++||.+.|+..+...
T Consensus 310 ~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~~------------~~~~~~~~L~-~~Gv~v~~~~~~~~~-- 371 (409)
T 3kki_A 310 RQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGDER------------NTEKVRDYLE-SNGVFGSVFCRPATS-- 371 (409)
T ss_dssp HHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEESHH------------HHHHHHHHHH-HTTEECEEECTTSSC--
T ss_pred HHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCCHH------------HHHHHHHHHH-HCCceEeeeCCCCcC--
Confidence 888999999999999998 77665 35667776664221 1233444444 559999885543221
Q ss_pred ccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHH
Q psy13922 421 TYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFR 498 (509)
Q Consensus 421 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~ 498 (509)
.+ ..++|+++. +++++|++++++|+
T Consensus 372 ---------------------------------------------~~--------~~~iRi~~~~~~t~e~i~~~~~~l~ 398 (409)
T 3kki_A 372 ---------------------------------------------KN--------KNIIRLSLNSDVNDEQIAKIIEVCS 398 (409)
T ss_dssp ---------------------------------------------TT--------CEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------CC--------CcEEEEEccCCCCHHHHHHHHHHHH
Confidence 12 239999998 79999999999999
Q ss_pred HHHHHH
Q psy13922 499 EFHEEF 504 (509)
Q Consensus 499 ~~~~~~ 504 (509)
+++++.
T Consensus 399 ~~l~~~ 404 (409)
T 3kki_A 399 DAVNYG 404 (409)
T ss_dssp HHHHHS
T ss_pred HHHhcC
Confidence 998753
No 111
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=6.9e-28 Score=244.44 Aligned_cols=342 Identities=12% Similarity=0.126 Sum_probs=224.3
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
++..+|+.+++++.+.+.. .....+....+..++.+.+.+.+.+.+|.. ++++|++|+|+++++..+++++.++ +
T Consensus 11 ~p~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~~~~~l~~~-~ 85 (362)
T 3ffr_A 11 GPSELYPTVRQHMITALDE---KIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWERIIQNCVEK-K 85 (362)
T ss_dssp SSCCCCTTHHHHHHHHHHT---TTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHHHHHHHCSS-E
T ss_pred CCcCCCHHHHHHHHHHhcC---CccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHHHHHhccCC-c
Confidence 4556799999999888876 221111122333456666666666666643 5678999999999999999999876 4
Q ss_pred CCCCeEEEcCCCChh-HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 102 GKKPGVLIPIPQYPL-YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
.+++..+.|.. +...++..|++++.++.+++ +.+|++.|+ +++ ++++|++++|+||||.+++ +
T Consensus 86 ----~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~--~~~-----~~~~v~~~~~~nptG~~~~---l 149 (362)
T 3ffr_A 86 ----SFHCVNGSFSKRFYEFAGELGREAYKEEAAFG--KGFYPADIT--VPA-----DAEIICLTHNETSSGVSMP---V 149 (362)
T ss_dssp ----EEEEECSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCGGGCC--CCT-----TCCEEEEESEETTTTEECC---H
T ss_pred ----EEEEcCcHHHHHHHHHHHHhCCCeEEEecCCC--CCCCHHHHh--ccC-----CccEEEEEcCCCCcceeCC---H
Confidence 66666666662 44567788999999998643 588999998 443 7999999999999999999 8
Q ss_pred HHHHHHHHHC-CcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 181 QDIIKFAHRE-KLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 181 ~~l~~ia~~~-~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
++|.++|+++ |+++|+|++|..+.... .+. . ..+++.|+||.++|++|+ |+++ .+++
T Consensus 150 ~~i~~la~~~p~~~li~D~a~~~~~~~~-----~~~-----------~-~d~~~~s~~K~~~~~~G~--g~~~---~~~~ 207 (362)
T 3ffr_A 150 EDINTFRDKNKDALIFVDAVSSLPYPKF-----DWT-----------K-IDSVFFSVQKCFGLPAGL--GVWI---LNDR 207 (362)
T ss_dssp HHHTTSGGGSTTSEEEEECTTTTTSSCC-----CTT-----------S-CSEEEEETTSTTCCCSCC--EEEE---EEHH
T ss_pred HHHHHHHHhCCCCEEEEecccccCCccc-----Chh-----------H-CcEEEEecccccCCCCce--EEEE---ECHH
Confidence 8899999999 99999999998653211 110 0 135567999999437775 5665 5888
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH-HHH
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR-EKQ 338 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~-~~~ 338 (509)
+++.+.....+....+.. ++ + ....+........+.....++.++..+++ ...+ .++
T Consensus 208 ~~~~~~~~~~gg~~~~~~--------~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~al~----------~~~~~~~~ 265 (362)
T 3ffr_A 208 VIEKSKALLAKRKSIGTY--------HT---I-PSMLEKARVNQTPETPNAMNIFLLGKVTG----------DMLQISAD 265 (362)
T ss_dssp HHHHHHHHHHTTCCCCST--------TS---H-HHHHHHHTTTCCSSCCCHHHHHHHHHHHH----------HHHHHCHH
T ss_pred HHHHhhhccccCCCCccc--------cc---H-HHHHHHhhcCCCCCCchHHHHHHHHHHHH----------HHHHccHH
Confidence 888887765411100000 00 0 00000000000011111113333333321 1111 157
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeccC----CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCNPV----QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAG 414 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~ 414 (509)
++++.++++++++.+.|+++||+++..+ .++.++|+.+. + +..++. +.|.++||.+.||..
T Consensus 266 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~------------~--~~~~~~-~~l~~~gi~~~~g~~ 330 (362)
T 3ffr_A 266 GIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTT------------M--LPGEIN-KILEPFDMAVGAGYG 330 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEES------------S--CHHHHH-HHHGGGTEEEEECSG
T ss_pred HHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecC------------C--CHHHHH-HHHHHCCeEEecCcc
Confidence 8888999999999999999989887652 34566676554 2 244444 445555999998853
Q ss_pred CCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHH
Q psy13922 415 FGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKA 492 (509)
Q Consensus 415 f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~ 492 (509)
+.. .+ ++|+|+. +++++++.
T Consensus 331 ~~~------------------------------------------------~~----------~iRis~~~~~~~e~i~~ 352 (362)
T 3ffr_A 331 SKK------------------------------------------------ET----------QIRIANFPAHSLEQVHK 352 (362)
T ss_dssp GGT------------------------------------------------TT----------EEEEECCTTSCHHHHHH
T ss_pred ccC------------------------------------------------CC----------EEEEECCCCCCHHHHHH
Confidence 322 22 8999987 68999999
Q ss_pred HHHHHHHHH
Q psy13922 493 MLEKFREFH 501 (509)
Q Consensus 493 ~~~~l~~~~ 501 (509)
+++.|++++
T Consensus 353 l~~~l~~~~ 361 (362)
T 3ffr_A 353 LVQTLKEKI 361 (362)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 998888764
No 112
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=2.1e-28 Score=254.24 Aligned_cols=344 Identities=13% Similarity=0.115 Sum_probs=226.8
Q ss_pred CCCCCHHHHHHHHHHHh--cccCCCc-----ccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH
Q psy13922 23 DPRFPDDVKQRAQAVLD--GCRGQSV-----GSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL 95 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~--~~~~~~~-----~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 95 (509)
....|+.+++++.+.+. ...+... ..|.......++++.+++++ | +++++|++|+|+++|+..++++
T Consensus 31 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~~~~~v~~~~ggt~a~~~a~~~ 104 (423)
T 3lvm_A 31 TTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLV----G--ADPREIVFTSGATESDNLAIKG 104 (423)
T ss_dssp CCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH----T--CCGGGEEEESSHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHc----C--CCCCeEEEeCChHHHHHHHHHH
Confidence 34568899999988877 3111100 01112234456677777766 4 4677999999999999999999
Q ss_pred hhc----CCCCCCCeEEEcCCCChhHHHHH---HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 96 LIE----DVDGKKPGVLIPIPQYPLYSASL---AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 96 l~~----~gd~~~~~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
+.+ +|| .|+++.|+|.++...+ ...|++++.++.+++ +.+|++.|++.+++ ++++|++++|+
T Consensus 105 l~~~~~~~gd----~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~-----~~~~v~~~~~~ 173 (423)
T 3lvm_A 105 AANFYQKKGK----HIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRN--GIIDLKELEAAMRD-----DTILVSIMHVN 173 (423)
T ss_dssp HHHHHTTTCC----EEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTT--SCCCHHHHHHHCCT-----TEEEEECCSBC
T ss_pred HHHhhccCCC----EEEECCccchHHHHHHHHHHHcCCEEEEeccCCC--CccCHHHHHHhcCC-----CcEEEEEeCCC
Confidence 885 677 9999999999988777 445999999998763 57899999999987 79999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 169 NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 169 NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
||||.+++ +++|+++|+++|++||+||+|...... ..+.. . ...+++.|+||.+ |.+| +
T Consensus 174 nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-----~~~~~----~------~~di~~~s~sK~~-g~~g--~ 232 (423)
T 3lvm_A 174 NEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLP-----IDLSQ----L------KVDLMSFSGHKIY-GPKG--I 232 (423)
T ss_dssp TTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC-----CCTTT----S------CCSEEEEESTTTT-SCSS--C
T ss_pred CCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-----cChhh----c------CCCEEEechHHhc-CCCC--e
Confidence 99999999 888999999999999999998763221 11111 0 1146677999988 6666 7
Q ss_pred EEEeeecCCHHHHHHHHHhhh--------cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhccc
Q psy13922 249 GYSEVINLDPGVKAMLHKSIS--------AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVV 320 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 320 (509)
|+++ .++++++.+..... ....++.. .+.++..++
T Consensus 233 G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~al 275 (423)
T 3lvm_A 233 GALY---VRRKPRVRIEAQMHGGGHERGMRSGTLPVH----------------------------------QIVGMGEAY 275 (423)
T ss_dssp EEEE---ECBTTBCCCCCSSCSSCTTTTTCCSCCCHH----------------------------------HHHHHHHHH
T ss_pred EEEE---EeccccCCCCccccCCcccccccCCCCCHH----------------------------------HHHHHHHHH
Confidence 8887 45554444433211 01112222 233332221
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCc---eeEEeecCCCCHHHHHHHhhcCCCCcHHH
Q psy13922 321 NPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQG---AMYAFPQMKLPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (509)
....++++++++.++++++.+.+.|+++|++.+..+.+ +.++++.+. +. +...
T Consensus 276 ----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~- 331 (423)
T 3lvm_A 276 ----------RIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFN------------YV-EGES- 331 (423)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEET------------TS-CHHH-
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeC------------CC-CHHH-
Confidence 22233378889999999999999999998988876543 223333332 11 2333
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
+...|.+ |.+.+|..|..... -|. ..+...|+..... ..
T Consensus 332 l~~~l~~--i~v~~g~~~~~~~~--------------------------~~~-----~~~~~~g~~~~~~--------~~ 370 (423)
T 3lvm_A 332 LIMALKD--LAVSSGSACTSASL--------------------------EPS-----YVLRALGLNDELA--------HS 370 (423)
T ss_dssp HHHHTTT--EECBCCCC-----C--------------------------CCC-----HHHHHHTCCHHHH--------HT
T ss_pred HHHHHhh--heeccCccccCCCc--------------------------ccc-----HHHHHhCCCcccc--------Cc
Confidence 3455555 99999987765100 000 0000000000000 12
Q ss_pred eEEEEee--cChHHHHHHHHHHHHHHHHHHh
Q psy13922 478 HFRTTIL--PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 478 ~~Rls~~--~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
++|+++. .+++++++++++|+++++++++
T Consensus 371 ~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 371 SIRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 8999998 6889999999999999987654
No 113
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.96 E-value=1.7e-27 Score=246.51 Aligned_cols=327 Identities=12% Similarity=0.080 Sum_probs=214.2
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEE-EeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh--HHHHHHhcCCEEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVI-LSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL--YSASLAEFNMEQIGY 131 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~-~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v 131 (509)
..++++.+++++ | .++++++ +++|+++++..+++++.++|| .|+++.|+|++ +...++..|++++.+
T Consensus 46 ~~~l~~~la~~~----g--~~~~~~~~~~~s~t~al~~~~~~l~~~gd----~Vl~~~~~~~~~~~~~~~~~~g~~~~~v 115 (416)
T 3isl_A 46 MNETMEMLRELF----Q--TKNRWAYPIDGTSRAGIEAVLASVIEPED----DVLIPIYGRFGYLLTEIAERYGANVHML 115 (416)
T ss_dssp HHHHHHHHHHHT----T--CCCSEEEEEESCHHHHHHHHHHHHCCTTC----EEEEEESSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHh----C--CCCCcEEEecCcHHHHHHHHHHHhcCCCC----EEEEecCCcccHHHHHHHHhcCCeeEEE
Confidence 345555555555 5 4456555 889999999999999999988 99999999998 777888999999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcc
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~ 211 (509)
+.+++ +.+|++.|++.+++. ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.....
T Consensus 116 ~~~~~--~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~----- 181 (416)
T 3isl_A 116 ECEWG--TVFDPEDIIREIKKV----KPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIGGCE----- 181 (416)
T ss_dssp ECCTT--CCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTTTSC-----
T ss_pred ecCCC--CCCCHHHHHHHHhhC----CCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccccCCC-----
Confidence 98765 378999999999843 7999999999999999988 889999999999999999998753221
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh---cccCcc----hhhhhcccc
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS---AMLCPT----VLALVSLPQ 284 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~---~~~~~~----~~~~~~~~~ 284 (509)
..+.. . ...+++.|+||.+.| +.++|+++ .++++++.+..... +|.... ..+.....
T Consensus 182 ~~~~~----~------~~d~~~~s~~K~l~g--~~g~g~~~---~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~- 245 (416)
T 3isl_A 182 VKVDE----W------KIDAAIGGTQKCLSV--PSGMAPIT---YNERVADVIAARKKVERGIATQADRAALSGNRPIT- 245 (416)
T ss_dssp CCTTT----T------TCSEEECCSSSTTCC--CSSEEEEE---ECHHHHHHHHTC------------------CCCCS-
T ss_pred cchhh----c------CCCEEEecCccccCC--CCCeEEEE---ECHHHHHHhhccccccccccccccchhccCCCCCC-
Confidence 11110 0 114557799997534 44589988 68999988875430 010000 00000000
Q ss_pred ccCCCCCchhHHHH--HHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCC
Q psy13922 285 LFDDPRFPDDVKQR--AQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE-KQSVLDSLKQRAKMVADTFNSIEGM 361 (509)
Q Consensus 285 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~g~ 361 (509)
...+....... ....+..+......+.++..++ ....++ ++++++.++++++++.+.|+++ |+
T Consensus 246 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al----------~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~ 311 (416)
T 3isl_A 246 ---SNYFDLSQLEDYWSERRLNHHTEATTMLYALREGV----------RLVLEEGLETRFERHRHHEAALAAGIKAM-GL 311 (416)
T ss_dssp ---CSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHH----------HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred ---ccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHH----------HHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 00000000000 0000011111111333333332 223333 7888999999999999999997 88
Q ss_pred eeccCCc---eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHH
Q psy13922 362 SCNPVQG---AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAI 438 (509)
Q Consensus 362 ~~~~~~~---g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~ 438 (509)
++..+.+ +.++++.++ . +. +..++...+++++||.+.+|.....
T Consensus 312 ~~~~~~~~~~~~~~~~~~~--~---------~~-~~~~l~~~L~~~~gi~v~~g~~~~~--------------------- 358 (416)
T 3isl_A 312 RLFGDDSCKMPVVTCVEIP--G---------GI-DGESVRDMLLAQFGIEIASSFGPLA--------------------- 358 (416)
T ss_dssp CBCSCGGGBCTTEEEEECC--T---------TC-CHHHHHHHHHHHHCEECBCCCSTTT---------------------
T ss_pred EeccCccccCCcEEEEeCC--C---------CC-CHHHHHHHHHHhCCEEEecCCCCCC---------------------
Confidence 8876654 455665553 1 22 3455556666667999998763211
Q ss_pred HHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHH-HHHHHHHHHHHHHHHH
Q psy13922 439 AKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEK-LKAMLEKFREFHEEFL 505 (509)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~-i~~~~~~l~~~~~~~~ 505 (509)
. + ++|+++. .++++ +++++++|+++++++.
T Consensus 359 ---------------------------~--~--------~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 359 ---------------------------G--K--------IWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp ---------------------------T--T--------EEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred ---------------------------C--C--------EEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 2 2 8999994 45555 9999999999987653
No 114
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.96 E-value=4.9e-28 Score=245.68 Aligned_cols=320 Identities=13% Similarity=0.104 Sum_probs=223.0
Q ss_pred CCCHHHHHHHHHHHhcccCCCcccCCC-C-cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCC
Q psy13922 25 RFPDDVKQRAQAVLDGCRGQSVGSYTD-S-PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDG 102 (509)
Q Consensus 25 ~~p~~v~~a~~~~l~~~~~~~~~~Y~~-~-~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~ 102 (509)
..|+.+++++.+.+ . +.|+. . .+..++|++++++++ .+.+++++++|+|+++++..++++++++||
T Consensus 14 ~~~~~v~~a~~~~~-----~--~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd- 81 (366)
T 1m32_A 14 TTSRTVKEAMLFDS-----C--TWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLLQGSGSYAVEAVLGSALGPQD- 81 (366)
T ss_dssp CCCHHHHHTTCCCC-----C--TTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEEESCHHHHHHHHHHHSCCTTC-
T ss_pred CCCHHHHHHHhhhh-----c--CCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEEecChHHHHHHHHHHhcCCCC-
Confidence 36788888875532 1 11221 1 567899999999983 122345899999999999999999988887
Q ss_pred CCCeEEEcC-CCChh-HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 103 KKPGVLIPI-PQYPL-YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 103 ~~~~Vlv~~-p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
.|+++. ++|.. +...++..|.+++.++.++. +.+|++.|++.+++. .++++|++++|+||||.+++ +
T Consensus 82 ---~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~---~~~~~v~~~~~~nptG~~~~---l 150 (366)
T 1m32_A 82 ---KVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEV--ARPDVQAIDAILNAD---PTISHIAMVHSETTTGMLNP---I 150 (366)
T ss_dssp ---CEEEEESSHHHHHHHHHHHHHTCCEEEEECCTT--SCCCHHHHHHHHHHC---TTCCEEEEESEETTTTEECC---H
T ss_pred ---eEEEEeCCCccHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhcC---CCeEEEEEecccCCcceecC---H
Confidence 888776 55544 56777888999999998753 478999999999862 14789999999999999998 8
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGV 260 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~ 260 (509)
++|.++|+++|+++|+|++|+..... .++. +. ...+++.|+||.+.| +.++||++ .++++
T Consensus 151 ~~i~~l~~~~~~~li~Dea~~~~~~~-----~~~~----~~------~~di~~~s~~K~~~~--~~g~G~~~---~~~~~ 210 (366)
T 1m32_A 151 DEVGALAHRYGKTYIVDAMSSFGGIP-----MDIA----AL------HIDYLISSANKCIQG--VPGFAFVI---AREQK 210 (366)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSC-----CCTT----TT------TCSEEEEESSSTTCC--CSSEEEEE---EEHHH
T ss_pred HHHHHHHHHcCCEEEEECCccccCcC-----cccc----cc------CccEEEecCcccccC--CCceEEEE---ECHHH
Confidence 89999999999999999999854321 1111 11 124667899997733 34579998 57777
Q ss_pred HHHHHHhhhcc-------------------cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccC
Q psy13922 261 KAMLHKSISAM-------------------LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVN 321 (509)
Q Consensus 261 ~~~l~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 321 (509)
++.+......+ +.++.. .+.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~al- 255 (366)
T 1m32_A 211 LAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTH----------------------------------TVLAFAQAL- 255 (366)
T ss_dssp HTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHH----------------------------------HHHHHHHHH-
T ss_pred HHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHH----------------------------------HHHHHHHHH-
Confidence 76654321000 111111 233333332
Q ss_pred CCCCCCCchHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCCeeccC---CceeEEeecCCCCHHHHHHHhhcCCCCcHH
Q psy13922 322 PPQPGEPSYEQFSRE--KQSVLDSLKQRAKMVADTFNSIEGMSCNPV---QGAMYAFPQMKLPAKAIAKAKAEGKCPSVL 396 (509)
Q Consensus 322 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (509)
+...++ ++++++.++++++++.+.|+++ ++++..+ .+++++|++++.. .+. +...
T Consensus 256 ---------~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~ 315 (366)
T 1m32_A 256 ---------KELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPED---------PQY-RFSE 315 (366)
T ss_dssp ---------HHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCC---------TTC-CHHH
T ss_pred ---------HHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCcc---------CCC-CHHH
Confidence 222233 5678889999999999999988 8777654 4677888766410 011 2344
Q ss_pred HHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCc
Q psy13922 397 YAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGT 476 (509)
Q Consensus 397 ~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (509)
+. +.|.++||.+.||..|. .+
T Consensus 316 ~~-~~l~~~gi~v~~~~~~~-------------------------------------------------~~--------- 336 (366)
T 1m32_A 316 FY-RRLKEQGFVIYPGKVSQ-------------------------------------------------SD--------- 336 (366)
T ss_dssp HH-HHHHHTTEECEECCCSS-------------------------------------------------SC---------
T ss_pred HH-HHHHHCCEEEECCcCCC-------------------------------------------------CC---------
Confidence 44 44556699999987652 23
Q ss_pred eeEEEEee--cChHHHHHHHHHHHHHHH
Q psy13922 477 YHFRTTIL--PQPEKLKAMLEKFREFHE 502 (509)
Q Consensus 477 ~~~Rls~~--~~~~~i~~~~~~l~~~~~ 502 (509)
++|+++. ++++++++++++|+++++
T Consensus 337 -~iRi~~~~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 337 -CFRIGNIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp -EEEEECCSSCCHHHHHHHHHHHHHHCT
T ss_pred -EEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 8999998 589999999999988764
No 115
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.96 E-value=7.1e-27 Score=240.18 Aligned_cols=305 Identities=11% Similarity=0.121 Sum_probs=206.6
Q ss_pred CCC-CCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hc
Q psy13922 21 FDD-PRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IE 98 (509)
Q Consensus 21 ~~~-~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~ 98 (509)
++. |.+++.+++++.+.+.. +.+. |.+..+..++|++++++++ . .+.|++|+| +++++.+++++ .+
T Consensus 9 f~~~p~~~~~~~~a~~~~l~~---~~~~-~~~~~~~~~l~~~la~~~~------~-~~~i~~~sG-t~al~~~l~~l~~~ 76 (388)
T 1b9h_A 9 FPAWPQYDDAERNGLVRALEQ---GQWW-RMGGDEVNSFEREFAAHHG------A-AHALAVTNG-THALELALQVMGVG 76 (388)
T ss_dssp CCCSSCCCHHHHHHHHHHHHT---SCCB-TTTCSHHHHHHHHHHHHTT------C-SEEEEESCH-HHHHHHHHHHTTCC
T ss_pred CCCCCCCCHHHHHHHHHHHHc---CCee-ecCCHHHHHHHHHHHHHhC------C-CeEEEeCCH-HHHHHHHHHHcCCC
Confidence 444 77789999999999987 3333 6677788999999999984 1 256777766 89999999999 78
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| +|+++.|+|.++...++..|++++.++.+++ +|.+|++.|++.+++ ++++|+ |+||||.+.+
T Consensus 77 ~gd----~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~-----~~~~v~---~~n~tG~~~~-- 141 (388)
T 1b9h_A 77 PGT----EVIVPAFTFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTP-----RTKVIM---PVHMAGLMAD-- 141 (388)
T ss_dssp TTC----EEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCT-----TEEEEC---CBCGGGCCCC--
T ss_pred CcC----EEEECCCccHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCc-----CceEEE---EeCCccCcCC--
Confidence 888 9999999999999999999999999998764 478999999999875 688777 9999999976
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
+++|.++|+++|++||+|++|+.+....+ .++. .. ..+.+.||||.. +++|.|+||++. .++
T Consensus 142 -l~~i~~la~~~~~~li~D~a~~~g~~~~~---~~~~----~~-------~~i~~~S~s~~K-~l~g~~~G~~~~--~~~ 203 (388)
T 1b9h_A 142 -MDALAKISADTGVPLLQDAAHAHGARWQG---KRVG----EL-------DSIATFSFQNGK-LMTAGEGGAVVF--PDG 203 (388)
T ss_dssp -HHHHHHHHHHHTCCBCEECTTCTTCEETT---EEGG----GS-------SSCEEEECCTTS-SSCSSSCEEEEE--CTT
T ss_pred -HHHHHHHHHHcCCEEEEecchhcCCccCC---eecc----cc-------cceEEEEccCCC-cccCCCeEEEEE--CCH
Confidence 89999999999999999999986432211 1111 11 145577999666 466779999973 333
Q ss_pred HH--HHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 259 GV--KAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 259 ~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
.+ ++.+........ ... ...+.... .+.........+..+ ....++
T Consensus 204 ~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~--------------~g~~~~~~~~~~a~~-----------~~~~~~ 251 (388)
T 1b9h_A 204 ETEKYETAFLRHSCGR--PRD-----DRRYFHKI--------------AGSNMRLNEFSASVL-----------RAQLAR 251 (388)
T ss_dssp CHHHHHHHHHHTBTTC--CTT-----CSSCCCCS--------------CCCBCBCBHHHHHHH-----------HHHHTT
T ss_pred HHHHHHHHHHHHhCCC--Ccc-----Cccceeec--------------ccccCCcCHHHHHHH-----------HHHHHH
Confidence 46 566654332100 000 00000000 000000000011111 112223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeecc------CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCNP------VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
+++.++.++++++++.+.|+++|++.+.. +.+++++|+.++-... .+.+.+ ...|.++||.+.
T Consensus 252 l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l-~~~L~~~gI~v~ 320 (388)
T 1b9h_A 252 LDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTE----------ERRNAL-VDRLVEAGLPAF 320 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCH----------HHHHHH-HHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCc----------ccHHHH-HHHHHHCCCCcc
Confidence 66677888889999999999988888764 3567888877751100 012333 445556899999
Q ss_pred cCC
Q psy13922 411 PGA 413 (509)
Q Consensus 411 pg~ 413 (509)
++.
T Consensus 321 ~~~ 323 (388)
T 1b9h_A 321 AAF 323 (388)
T ss_dssp ECC
T ss_pred ccc
Confidence 865
No 116
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=1.5e-27 Score=244.14 Aligned_cols=339 Identities=10% Similarity=0.076 Sum_probs=222.7
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCC--cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh--
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDS--PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-- 97 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~--~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-- 97 (509)
+++.+++.+++++.+.+.. .|.+. ....++++.+++++...++ +++++|++|+|+++++..+++++.
T Consensus 12 ~p~~~~~~v~~a~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~g~t~al~~~~~~~~~~ 82 (385)
T 2bkw_A 12 GPIILSGAVQKALDVPSLG-------HTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVLAGSGTLGWDIFASNFILS 82 (385)
T ss_dssp SSCCCCHHHHHTTSCCCCC-------TTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEEESCTTHHHHHHHHHHSCT
T ss_pred CCcCchHHHHHHHhccccc-------cCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEEcCchHHHHHHHHHHHhcc
Confidence 4455677777776443322 12221 2456788889988865443 457899999999999999999997
Q ss_pred -cCCCCCCCeEEEc-CCCChhHH-HHHHhcCCEEEEEec-CCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 98 -EDVDGKKPGVLIP-IPQYPLYS-ASLAEFNMEQIGYYL-DESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 98 -~~gd~~~~~Vlv~-~p~y~~~~-~~~~~~g~~~~~v~~-~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
++|| +|+++ .|.|+.+. ..++..|++++.++. ++ ++.+|++.|++.+++. ++++|++++|+||||.
T Consensus 83 ~~~gd----~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~ 152 (385)
T 2bkw_A 83 KAPNK----NVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKI--GESVPLELITEKLSQN----SYGAVTVTHVDTSTAV 152 (385)
T ss_dssp TCSCC----EEEEECSSHHHHHHHHHHHHTTCEEEEECCSST--TSCCCHHHHHHHHHHS----CCSEEEEESEETTTTE
T ss_pred CCCCC----eEEEEcCCcchHHHHHHHHHcCCceEEEecCCC--CCCCCHHHHHHHHhcC----CCCEEEEEccCCCcCe
Confidence 7887 98887 55666653 677888999999998 53 4578999999999863 6899999999999999
Q ss_pred CCCHHHHHHHHHHHHHC--CcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 174 VLTKENIQDIIKFAHRE--KLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~--~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
+++ +++|+++|+++ |+++|+|++|..... ..++. +. + ..+++.|+||.+.|++| +||+
T Consensus 153 ~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~~-----~~~~~----~~-----~-~d~~~~s~~K~~~~~~G--~G~~ 212 (385)
T 2bkw_A 153 LSD---LKAISQAIKQTSPETFFVVDAVCSIGCE-----EFEFD----EW-----G-VDFALTASQKAIGAPAG--LSIS 212 (385)
T ss_dssp ECC---HHHHHHHHHHHCTTSEEEEECTTTTTTS-----CCCTT----TT-----T-CSEEEEESSSTTCCCSC--EEEE
T ss_pred EcC---HHHHHHHHHhhCCCCEEEEECccccCCc-----ccccc----cc-----C-ceEEEecCccccccCCc--ceEE
Confidence 998 78999999999 999999999974221 11111 11 1 13556799997634566 4888
Q ss_pred eeecCCHHHHH-HHHHhh---hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhc------ccCcccccchhhcccC
Q psy13922 252 EVINLDPGVKA-MLHKSI---SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDG------CRGQSVGQTVMDCVVN 321 (509)
Q Consensus 252 ~~~~~~~~~~~-~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~al~~~~~ 321 (509)
+ .++++++ .+.... ......... ........+.. ++....++.++..+++
T Consensus 213 ~---~~~~~~~~~l~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 272 (385)
T 2bkw_A 213 L---CSSRFMDYALNDSKNGHVHGYFSSLR-----------------RWTPIMENYEAGKGAYFATPPVQLINSLDVALK 272 (385)
T ss_dssp E---ECHHHHHHHTCHHHHCCCSCSTTCHH-----------------HHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHH
T ss_pred E---EcHHHHHHHHhhccCCCCCceeecHH-----------------HHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHH
Confidence 7 5777766 542110 000000000 00000000000 0111113333333321
Q ss_pred CCCCCCCchHHHHHH-HHHHHHHHHHHHHHHHHHH-hcCCCCeeccC-----CceeEEeecCCCCHHHHHHHhhcCCCCc
Q psy13922 322 PPQPGEPSYEQFSRE-KQSVLDSLKQRAKMVADTF-NSIEGMSCNPV-----QGAMYAFPQMKLPAKAIAKAKAEGKCPS 394 (509)
Q Consensus 322 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L-~~~~g~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 394 (509)
...++ ++++++.++++++++.+.| +++ ++++..+ ..+.++|+.++ +.
T Consensus 273 ----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~---------------~~ 326 (385)
T 2bkw_A 273 ----------EILEEGLHKRWDLHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVA---------------DP 326 (385)
T ss_dssp ----------HHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECS---------------CH
T ss_pred ----------HHHHccHHHHHHHHHHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecC---------------CH
Confidence 12222 5677888999999999999 888 8887643 24667776664 13
Q ss_pred HHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCC
Q psy13922 395 VLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVP 474 (509)
Q Consensus 395 ~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (509)
.++ .+.|.++||.+.+|..+.. +.+
T Consensus 327 ~~~-~~~l~~~gi~v~~g~~~~~-------------------------------------------------~~~----- 351 (385)
T 2bkw_A 327 PDV-IAFLKSHGVVIAGGIHKDI-------------------------------------------------GPK----- 351 (385)
T ss_dssp HHH-HHHHHHTTEECBCCCCTTT-------------------------------------------------GGG-----
T ss_pred HHH-HHHHHHCCeEEeCCCCccc-------------------------------------------------CCC-----
Confidence 333 4445678999998875422 112
Q ss_pred CceeEEEE-ee-----cChHHHHHHHHHHHHHHHH
Q psy13922 475 GTYHFRTT-IL-----PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 475 ~~~~~Rls-~~-----~~~~~i~~~~~~l~~~~~~ 503 (509)
++|++ ++ ++++++++++++|++++++
T Consensus 352 ---~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 352 ---YIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp ---EEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred ---EEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 89999 65 5899999999999988753
No 117
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.96 E-value=2.6e-27 Score=247.14 Aligned_cols=352 Identities=13% Similarity=0.017 Sum_probs=205.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
|+.+++++.+++... ..|.+..+..+.++++++++.+.++ ...++|++|+|+++++..+++.++.. |++
T Consensus 47 ~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~ 119 (430)
T 3i4j_A 47 RAEVGERMAAQAARL-----PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEATESAVKLARQYHVERGEP 119 (430)
T ss_dssp CHHHHHHHHHHHHHC-----CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhc-----ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 899999999998872 1233334445677777777776655 45679999999999999999988742 211
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCE---------------EEEEecCCCC-CCCCCHHHHHHHHHhhhccCCceEEEEeC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNME---------------QIGYYLDESK-QWGLPISELERSITEARKHCNPRAIVIIN 166 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~---------------~~~v~~~~~~-~~~~d~~~L~~~i~~~~~~~~~~~ivi~~ 166 (509)
.++.|++..|+|+++...+...+.. +..++.+... ....|++.|++.+++... .++++|+++.
T Consensus 120 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~-~~~~~vi~~p 198 (430)
T 3i4j_A 120 GRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGP-ETVAAFMAEP 198 (430)
T ss_dssp TCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCG-GGEEEEEECS
T ss_pred CCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCC-CCEEEEEEcC
Confidence 2349999999999987665554432 1122211100 001256899999975210 1456666666
Q ss_pred CCC-CCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC
Q psy13922 167 PGN-PTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC 244 (509)
Q Consensus 167 p~N-PtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~ 244 (509)
++| ++|. .++++++++|.++|++||+++|+||+|.+|...+. ..+.... ++.. .++ .+|||.+ | +
T Consensus 199 ~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~--~~~~~~~-~~~~-----~di---~t~sK~l-~-~ 265 (430)
T 3i4j_A 199 VVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS--PLALSRW-SGVT-----PDI---AVLGKGL-A-A 265 (430)
T ss_dssp SCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGT-TTCC-----CSE---EEECGGG-T-T
T ss_pred cccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc--hhhhhhh-cCCC-----CcE---EEEcccc-c-C
Confidence 677 8886 77888999999999999999999999999876542 2222111 0111 113 3689999 5 6
Q ss_pred C-CeeEEEeeecCCHHHHHHHHHh-----hhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhc
Q psy13922 245 G-LRGGYSEVINLDPGVKAMLHKS-----ISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDC 318 (509)
Q Consensus 245 G-lr~G~v~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 318 (509)
| +|+||++ +++++++.+.+. ....++.+.+++.+ +.+++..
T Consensus 266 G~~r~G~~~---~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aa------------------------------a~aal~~ 312 (430)
T 3i4j_A 266 GYAPLAGLL---AAPQVYETVMGGSGAFMHGFTYAGHPVSVAA------------------------------GLSVLDI 312 (430)
T ss_dssp TSSCCEEEE---ECHHHHHHHHHTTCBCCCCCTTTTCHHHHHH------------------------------HHHHHHH
T ss_pred CccccEEEE---ECHHHHHHHhccCCcccccCCCCCCHHHHHH------------------------------HHHHHHH
Confidence 9 9999998 799999999863 22344556652222 2222222
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHH
Q psy13922 319 VVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYA 398 (509)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 398 (509)
..+ + +..+.+++....+++.+.+.+.++|++...++.|.++ ++++.... ... . .........+
T Consensus 313 ~~~---------~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~-~-~~~~~~~~~~- 375 (430)
T 3i4j_A 313 VER---------E---DLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLL-GVVLGDLA-TGQ-A-FETPGIASRI- 375 (430)
T ss_dssp HHH---------T---THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEE-EEEEC---------------CHHHH-
T ss_pred HHc---------c---cHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEE-EEEecccc-ccC-C-CccHHHHHHH-
Confidence 100 1 1134444444455555555555566666666666654 44443110 000 0 0000012333
Q ss_pred HHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCcee
Q psy13922 399 FELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYH 478 (509)
Q Consensus 399 ~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (509)
...|.++||.++|+..+... .+.. +
T Consensus 376 ~~~l~~~Gv~v~~~~~~~~~-----------------------------------------------~~~~--------~ 400 (430)
T 3i4j_A 376 GAAALKRGLITYPGSGAEPN-----------------------------------------------GRGD--------H 400 (430)
T ss_dssp HHHHHHTTEECC----------------------------------------------------------C--------E
T ss_pred HHHHHhCCCEEEecccccCC-----------------------------------------------CCCC--------E
Confidence 44555789999997533220 1222 8
Q ss_pred EEEEee--cChHHHHHHHHHHHHHHHHH
Q psy13922 479 FRTTIL--PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 479 ~Rls~~--~~~~~i~~~~~~l~~~~~~~ 504 (509)
+|++++ .+++++++++++|+++++++
T Consensus 401 iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 401 LLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999987 89999999999999999764
No 118
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.96 E-value=1.1e-27 Score=246.50 Aligned_cols=312 Identities=11% Similarity=0.121 Sum_probs=215.7
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC-----CC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED-----VD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----gd 101 (509)
++.+.+++.+.+....... ..| +..-..++++.+++++ | ++++++|+|+++++..+++.+..+ +.
T Consensus 54 ~p~v~~a~~~~~~~~~~~~-~~~-~~~~~~~l~~~la~~~----g----~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~ 123 (392)
T 3ruy_A 54 HPKIINALIDQANRVTLTS-RAF-HSDQLGPWYEKVAKLT----N----KEMVLPMNTGAEAVETAIKTARRWAYDVKKV 123 (392)
T ss_dssp CHHHHHHHHHHHTTCSCCC-TTS-EETTHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CHHHHHHHHHHHHhccccc-ccc-CCHHHHHHHHHHHHhc----C----CCEEEEeCcHHHHHHHHHHHHHHhhhhccCC
Confidence 7899999999987732111 112 2233366777777666 3 679999999999999999988755 00
Q ss_pred -CCCCeEEEcCCCChhHHHHHHhcCCE-------------EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCC
Q psy13922 102 -GKKPGVLIPIPQYPLYSASLAEFNME-------------QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINP 167 (509)
Q Consensus 102 -~~~~~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p 167 (509)
+.++.|+++.|+|+++...+...+.. +..++. .|++.|++.++. ++++|++++|
T Consensus 124 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~-----~~~~v~~~~~ 191 (392)
T 3ruy_A 124 EANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAITP-----NTAAFILEPI 191 (392)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCCT-----TEEEEEECSS
T ss_pred CCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHHHhcc-----CeEEEEEeCc
Confidence 01239999999998876665544322 333332 279999999885 7999999999
Q ss_pred CCCCCCCCCHHH-HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-
Q psy13922 168 GNPTGQVLTKEN-IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG- 245 (509)
Q Consensus 168 ~NPtG~~~s~~~-l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G- 245 (509)
+||||.+++.++ +++|+++|++||+++|+||+|.+|.+.+. ..+... .+.. .+++ |+||.++ +|
T Consensus 192 ~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~--~~~~-----~d~~---~~SK~l~--gG~ 257 (392)
T 3ruy_A 192 QGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK--VFACDW--DNVT-----PDMY---ILGKALG--GGV 257 (392)
T ss_dssp BSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSS--SSGGGG--GTCC-----CSEE---EECGGGG--TTT
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcccc--chhhhc--cCCC-----CCEE---EEchhhh--CCh
Confidence 999999996555 99999999999999999999998876542 222111 1111 1233 7789984 57
Q ss_pred CeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCC
Q psy13922 246 LRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQ 324 (509)
Q Consensus 246 lr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 324 (509)
+|+||++ .++++++.+..... ...+.+.+ ++.++..+++
T Consensus 258 ~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~--- 297 (392)
T 3ruy_A 258 FPISCAA---ANRDILGVFEPGSHGSTFGGNPL----------------------------------ACAVSIAALE--- 297 (392)
T ss_dssp SCCEEEE---ECHHHHTTCCTTSSCCSSTTCHH----------------------------------HHHHHHHHHH---
T ss_pred hhhEEEE---ECHHHHhhhccCCcCCCCCCCHH----------------------------------HHHHHHHHHH---
Confidence 9999998 68888877765433 23344555 3333333322
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHH
Q psy13922 325 PGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSI--EGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELL 402 (509)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll 402 (509)
..+ .+++++.++++++++.+.|+++ +.+....+.++++.|. ++ + +...+. ..|
T Consensus 298 --------~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~-~~------------~--~~~~l~-~~l 352 (392)
T 3ruy_A 298 --------VLE-EEKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIGIE-LN------------E--PARPYC-EQL 352 (392)
T ss_dssp --------HHH-HTTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEEEE-ES------------S--CSHHHH-HHH
T ss_pred --------HHH-hhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEEEE-Ec------------c--hHHHHH-HHH
Confidence 111 2567788889999999999987 3355556677766653 43 1 244444 455
Q ss_pred hhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEE
Q psy13922 403 ERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTT 482 (509)
Q Consensus 403 ~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls 482 (509)
.++||.+.||. .+ ++|++
T Consensus 353 ~~~gi~v~~~~----------------------------------------------------~~----------~iRi~ 370 (392)
T 3ruy_A 353 KAAGLLCKETH----------------------------------------------------EN----------VIRIA 370 (392)
T ss_dssp HTTTEECCCBT----------------------------------------------------TT----------EEEEC
T ss_pred HHCCcEEecCC----------------------------------------------------CC----------EEEEE
Confidence 57899998753 22 89999
Q ss_pred --eecChHHHHHHHHHHHHHH
Q psy13922 483 --ILPQPEKLKAMLEKFREFH 501 (509)
Q Consensus 483 --~~~~~~~i~~~~~~l~~~~ 501 (509)
+..+++++++++++|++++
T Consensus 371 ~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 371 PPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp CCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHh
Confidence 4489999999999999876
No 119
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.95 E-value=9.5e-28 Score=247.96 Aligned_cols=317 Identities=13% Similarity=0.147 Sum_probs=213.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-------C
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-------D 99 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------~ 99 (509)
|+.+.+++.+++.+.... ...| +.....++++.+++++ | .++|++|+|+++++..+++.++. +
T Consensus 57 ~p~v~~a~~~~~~~~~~~-~~~~-~~~~~~~l~~~la~~~----~----~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~ 126 (406)
T 4adb_A 57 HPELREALNEQASKFWHT-GNGY-TNEPVLRLAKKLIDAT----F----ADRVFFCNSGAEANEAALKLARKFAHDRYGS 126 (406)
T ss_dssp CHHHHHHHHHHHTTCSCC-CTTS-CCHHHHHHHHHHHHHS----S----CSEEEEESSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CHHHHHHHHHHHHhcccc-cCCc-CCHHHHHHHHHHHhhC----C----CCeEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 789999999998873211 1223 2333455666666554 3 45999999999999999998875 5
Q ss_pred C-CCCCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe
Q psy13922 100 V-DGKKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII 165 (509)
Q Consensus 100 g-d~~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~ 165 (509)
+ + .|+++.|+|+++...+...+. .+..++. .|++.|++.+++ ++++|+++
T Consensus 127 g~~----~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~-----~~~~v~~~ 190 (406)
T 4adb_A 127 HKS----GIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASALIDD-----STCAVIVE 190 (406)
T ss_dssp TCC----EEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCST-----TEEEEEEC
T ss_pred CCc----EEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHHhcC-----CeEEEEEe
Confidence 4 5 999999999998666555443 3333332 378999988875 79999988
Q ss_pred CCCCCCCCCC--CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCC
Q psy13922 166 NPGNPTGQVL--TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGE 243 (509)
Q Consensus 166 ~p~NPtG~~~--s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~ 243 (509)
|+||+|.++ +.+++++|+++|++||+++|+||+|.+|.+.+. ..+.... +.. .+++ ||||.+ |
T Consensus 191 -p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~~--~~~-----~d~~---t~sK~~-~- 255 (406)
T 4adb_A 191 -PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGE--LYAYMHY--GVT-----PDLL---TTAKAL-G- 255 (406)
T ss_dssp -SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSHHHHH--TCC-----CSEE---EECGGG-G-
T ss_pred -CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hHHHHhc--CCC-----CCEE---Eechhh-c-
Confidence 999999988 999999999999999999999999998876542 2222221 221 1244 679999 6
Q ss_pred CCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCC
Q psy13922 244 CGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNP 322 (509)
Q Consensus 244 ~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 322 (509)
+|+|+||++ .++++++.+..... ...+.+.+ .+.++...++
T Consensus 256 ~G~r~G~~~---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~~l~- 297 (406)
T 4adb_A 256 GGFPVGALL---ATEECARVMTVGTHGTTYGGNPL----------------------------------ASAVAGKVLE- 297 (406)
T ss_dssp TTSCCEEEE---ECHHHHHTCCTTSSCCSSTTCHH----------------------------------HHHHHHHHHH-
T ss_pred CCCCeEEEE---EcHHHHhhhccCCcCCCCCCCHH----------------------------------HHHHHHHHHH-
Confidence 999999998 79999888765533 23345555 3333322221
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHH
Q psy13922 323 PQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEG---MSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAF 399 (509)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 399 (509)
..+ .+++++.++++++.+.+.|+++.. .....+..+.++|+.+..+. ......+.
T Consensus 298 ----------~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~~- 355 (406)
T 4adb_A 298 ----------LIN-TPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADY----------AGQAKQIS- 355 (406)
T ss_dssp ----------HHS-SHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTT----------TTCHHHHH-
T ss_pred ----------HHH-hcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCc----------HHHHHHHH-
Confidence 000 145566667777777777765411 11111223566676664210 01234444
Q ss_pred HHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeE
Q psy13922 400 ELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHF 479 (509)
Q Consensus 400 ~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (509)
..|.++||.+.|+. .+ ++
T Consensus 356 ~~l~~~gi~v~~~~----------------------------------------------------~~----------~i 373 (406)
T 4adb_A 356 QEAAKAGVMVLIAG----------------------------------------------------GN----------VV 373 (406)
T ss_dssp HHHHHTTEECEESS----------------------------------------------------TT----------EE
T ss_pred HHHHHCCcEEeecC----------------------------------------------------CC----------eE
Confidence 44555699998743 22 89
Q ss_pred EEE--eecChHHHHHHHHHHHHHHHHHHh
Q psy13922 480 RTT--ILPQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 480 Rls--~~~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
|++ +..+++++++++++|+++++++.+
T Consensus 374 Ri~~~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 374 RFAPALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 995 558999999999999999987754
No 120
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.95 E-value=1.2e-26 Score=237.06 Aligned_cols=338 Identities=11% Similarity=0.079 Sum_probs=220.3
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
++..+|+.+++++.+.+.. .|. .+..++.+++++++.+.+|.+.+.+.+++|+|+++++..++++++++||
T Consensus 26 gp~~~~~~v~~a~~~~~~~-------~~~--~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd 96 (376)
T 3f0h_A 26 GPVMSSEEVRAIGAEQVPY-------FRT--TEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKD 96 (376)
T ss_dssp SSCCCCHHHHHHHTSCCCC-------CSS--HHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTC
T ss_pred CCCCCcHHHHHHhcCCCCC-------CCC--HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCC
Confidence 4455688888887554422 132 2334566666666666667543334566699999999999999999988
Q ss_pred CCCCeEEEcCCCChhHH--HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHH
Q psy13922 102 GKKPGVLIPIPQYPLYS--ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKEN 179 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~ 179 (509)
.|+++.|.|.+.. ..+...|.+++.++.+. ++.+|++.|++.++. ++++|++++|+||||.+++
T Consensus 97 ----~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~-----~~~~v~~~~~~nptG~~~~--- 162 (376)
T 3f0h_A 97 ----KVLVIDGGSFGHRFVQLCEIHEIPYVALKLEH--GKKLTKEKLYEYDNQ-----NFTGLLVNVDETSTAVLYD--- 162 (376)
T ss_dssp ----CEEEEESSHHHHHHHHHHHHTTCCEEEEECCT--TCCCCHHHHHTTTTS-----CCCEEEEESEETTTTEECC---
T ss_pred ----eEEEEeCChhhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHhhcc-----CceEEEEecccCCcceecC---
Confidence 9999998777654 34677799999998874 358899999987655 7999999999999999999
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|.++|+++|+++|+|++|..+... ..+... + . .+++.|+||.++|++| +|+++ .+++
T Consensus 163 l~~i~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~----~-----~-d~~~~s~~K~l~~~~G--~g~~~---~~~~ 222 (376)
T 3f0h_A 163 TMMIGEFCKKNNMFFVCDCVSAFLADP-----FNMNEC----G-----A-DVMITGSQKVLACPPG--ISVIV---LAPR 222 (376)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTSC-----CCHHHH----T-----C-SEEEEETTTTTCCCSS--CEEEE---ECHH
T ss_pred HHHHHHHHHHcCCEEEEEcCccccCcc-----cccccc----C-----c-cEEEecCcccccCCCc--eEEEE---ECHH
Confidence 999999999999999999999875432 222221 1 1 3556799999942566 56666 6899
Q ss_pred HHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCccccc---chhhcccCCCCCCCCchHHHHH-
Q psy13922 260 VKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQ---TVMDCVVNPPQPGEPSYEQFSR- 335 (509)
Q Consensus 260 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~al~~~~~~~~~~~~~~~~~~~- 335 (509)
+++.+............. ........++....... .++..++ ....+
T Consensus 223 ~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~a~~~al----------~~~~~~ 273 (376)
T 3f0h_A 223 GVERVEKSKVRTMYFDLK-------------------DALKNQERGQTPFTPAVGILLQINERL----------KEIKKH 273 (376)
T ss_dssp HHHHHHTCCCCCSTTCHH-------------------HHHHHHTTTCCSSCCCHHHHHHHHHHH----------HHHHHT
T ss_pred HHHHhhcCCCCceeecHH-------------------HHHhhcccCCCCCCCcHHHHHHHHHHH----------HHHHHh
Confidence 988886532210000000 00000000000001111 2222221 11112
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEe-ecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 336 -EKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAF-PQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 336 -~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
.++++++.++++++.+.+.|+++ ++.+.++.....++ +... +. +...+...+++++||.++||.
T Consensus 274 ~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~------------~~-~~~~l~~~l~~~~gi~v~~g~ 339 (376)
T 3f0h_A 274 GGADAEVARIASQAADFRAKIKDL-PFELVSESPANGVTSVHPT------------TA-NAYDIFLKLKDEYGIWICPNG 339 (376)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTTS-SEEECCSSBBTTEEEEEES------------SS-CHHHHHHHHHHHSSEECEECC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHc-CCccCccccCceEEEEeCC------------CC-CHHHHHHHHHHhCCEEEecCc
Confidence 26778888899999999999988 66665543222222 2111 21 244445555555599999873
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHH
Q psy13922 414 GFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLK 491 (509)
Q Consensus 414 ~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~ 491 (509)
. . .+.+ ++|+++. +++++++
T Consensus 340 ~--~------------------------------------------------~~~~--------~lRis~~~~~t~e~i~ 361 (376)
T 3f0h_A 340 G--E------------------------------------------------MKDT--------IFRVGHIGALTHEDNT 361 (376)
T ss_dssp G--G------------------------------------------------GTTT--------CEEEECCSSCCHHHHH
T ss_pred c--c------------------------------------------------cCCC--------EEEEecCCCCCHHHHH
Confidence 2 1 1222 8999986 7999999
Q ss_pred HHHHHHHHHHHH
Q psy13922 492 AMLEKFREFHEE 503 (509)
Q Consensus 492 ~~~~~l~~~~~~ 503 (509)
+++++|++++++
T Consensus 362 ~~~~~l~~~l~~ 373 (376)
T 3f0h_A 362 TLVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999998863
No 121
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.95 E-value=2.8e-27 Score=244.31 Aligned_cols=335 Identities=17% Similarity=0.106 Sum_probs=224.9
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCc---chHH--HHHHHH-HHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSP---GIEI--IRRHVA-QYISRRDGQPADWQDVILSAGASDGIKSVLKL 95 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~---g~~~--lr~~va-~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 95 (509)
+.+.+|+.+++++.+.+.+ .....|+... |.+. ++++++ +.+.+.+| .++++|++++|+ +++..++++
T Consensus 31 ~~~~~~~~v~~a~~~~~~~---~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g--~~~~~i~~~sGt-~a~~~~~~~ 104 (407)
T 2dkj_A 31 SENFVSKQVREAVGSVLTN---KYAEGYPGARYYGGCEVIDRVESLAIERAKALFG--AAWANVQPHSGS-QANMAVYMA 104 (407)
T ss_dssp TCCCCCHHHHHHHTSGGGG---CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSHH-HHHHHHHHH
T ss_pred CCCCCCHHHHHHHHhhhhc---CcccCCCcccccCCchHHHHHHHHHHHHHHHHhC--CCcceEEecchH-HHHHHHHHH
Confidence 5666799999999888865 2223355432 4332 344322 34444445 344556667765 599999999
Q ss_pred hhcCCCCCCCeEEEcCCCChhHH---HHHHhcCC--EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 96 LIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNM--EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 96 l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~--~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
+.++|| .|+++.|+|..+. ..++..|. ..+.++.++ .++.+|++.|++.+++. ++++|++++|+||
T Consensus 105 ~~~~gd----~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~----~~~~v~~~~p~~~ 175 (407)
T 2dkj_A 105 LMEPGD----TLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRP-DTELIDLEEVRRLALEH----RPKVIVAGASAYP 175 (407)
T ss_dssp HCCTTC----EEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCT-TTSSCCHHHHHHHHHHH----CCSEEEECCSSCC
T ss_pred hcCCCC----EEEEecccccCccchHHHHHhcCceEEEEecCCCc-ccCccCHHHHHHHHhhc----CCeEEEEeccccC
Confidence 988888 9999999998873 44455565 444444342 25689999999999854 6899999999998
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEcccCCc-ccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeE
Q psy13922 171 TGQVLTKENIQDIIKFAHREKLFLFADEVYQD-NVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGG 249 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G 249 (509)
...+ +++|.++|+++|+++|+||+|.. +.+.+. ....+ . . ..++++|+||.+ +|.|+|
T Consensus 176 --~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~~~-~----------~-~di~~~s~sK~l---~g~~~G 234 (407)
T 2dkj_A 176 --RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGL-HPNPL-P----------Y-AHVVTSTTHKTL---RGPRGG 234 (407)
T ss_dssp --SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTC-SCCCT-T----------T-CSEEEEESSGGG---CCCSCE
T ss_pred --CCCC---HHHHHHHHHHcCCEEEEEccccccccccCc-cCCcc-c----------c-ccEEEEeccccC---CCCCce
Confidence 4554 89999999999999999999998 544321 11111 0 1 156688999965 578999
Q ss_pred EEeeecCC-HHHHHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCC
Q psy13922 250 YSEVINLD-PGVKAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPG 326 (509)
Q Consensus 250 ~v~~~~~~-~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 326 (509)
|++ .+ +++++.+......+ ..++.. ...++..+++
T Consensus 235 ~~~---~~~~~~~~~l~~~~~~~~~~~~~~~----------------------------------~~~a~~~al~----- 272 (407)
T 2dkj_A 235 LIL---SNDPELGKRIDKLIFPGIQGGPLEH----------------------------------VIAGKAVAFF----- 272 (407)
T ss_dssp EEE---ESCHHHHHHHHHHHTTTTCSSCCHH----------------------------------HHHHHHHHHH-----
T ss_pred EEE---ECCHHHHHHHHhhhcccccCCCcHH----------------------------------HHHHHHHHHH-----
Confidence 998 56 89999887765422 122222 1212222211
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhc
Q psy13922 327 EPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERT 405 (509)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~ 405 (509)
.....+++++++.++++++++.+.|+++ |+++.. +.++.++|++++. .+. +... +...|.++
T Consensus 273 ----~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~----------~~~-~~~~-~~~~l~~~ 335 (407)
T 2dkj_A 273 ----EALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRP----------KGL-TGKE-AEERLDAV 335 (407)
T ss_dssp ----HHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGG----------GTC-CHHH-HHHHHHHT
T ss_pred ----HHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECcc----------cCC-CHHH-HHHHHHHc
Confidence 0012347888899999999999999998 888774 3567777876641 011 2333 45566789
Q ss_pred CeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-
Q psy13922 406 GICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL- 484 (509)
Q Consensus 406 gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~- 484 (509)
||.+.+|..|..... . ...+ ++|+++.
T Consensus 336 gi~v~~~~~~~~~~~----------------------------~----------------~~~~--------~iRis~~~ 363 (407)
T 2dkj_A 336 GITVNKNAIPFDPKP----------------------------P----------------RVTS--------GIRIGTPA 363 (407)
T ss_dssp TEECEECCCTTCSSC----------------------------T----------------TTCS--------EEEEECHH
T ss_pred CceecCCcCcccccc----------------------------c----------------cCCC--------ceeeeccc
Confidence 999999886422000 0 1112 8999995
Q ss_pred -----cChHHHHHHHHHHHHHHHH
Q psy13922 485 -----PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 485 -----~~~~~i~~~~~~l~~~~~~ 503 (509)
.+++++++++++|++++++
T Consensus 364 ~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 364 ITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp HHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHHhc
Confidence 6899999999999999876
No 122
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.95 E-value=8.2e-27 Score=236.92 Aligned_cols=303 Identities=13% Similarity=0.062 Sum_probs=206.7
Q ss_pred cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe--EEEcCCCChhHH---HHHH
Q psy13922 48 SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG--VLIPIPQYPLYS---ASLA 122 (509)
Q Consensus 48 ~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~--Vlv~~p~y~~~~---~~~~ 122 (509)
.|++..+..++++.++++++ .+..++++|+++++..++++++.++| . |+++.+.|.... ....
T Consensus 43 ~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~g~~a~~~a~~~~~~~g~----~~vvi~~~~~~~~~~~~~~~~~ 110 (359)
T 3pj0_A 43 IYGNGAVIEDFETKIAKILG--------KQSAVFFPSGTMAQQIALRIWADRKE----NRRVAYHPLSHLEIHEQDGLKE 110 (359)
T ss_dssp BTTBSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHHHHHT----CCEEEECTTCHHHHSSTTHHHH
T ss_pred cccCCHHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHHhcCC----CcEEEEeccceeeehhcchHHH
Confidence 47777888999999999983 22335568888999999999998887 5 445545543322 1224
Q ss_pred hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC-CCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 123 EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPT-GQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 123 ~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt-G~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
..|.+++.++.+ ++.+|++.|++. .+ ++++|++++|+||+ |.+++.+++++|+++|++||++||+|++|.
T Consensus 111 ~~g~~~~~v~~~---~~~~d~~~l~~~-~~-----~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~ 181 (359)
T 3pj0_A 111 LQQITPLLLGTA---NQLLTIDDIKSL-RE-----PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARL 181 (359)
T ss_dssp HHCCEEEECSCT---TSCCCHHHHHTC-SS-----CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTC
T ss_pred hcCceEEecCCc---CCCcCHHHHHhc-cC-----CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcch
Confidence 569999998863 358999999887 33 79999999999998 799999999999999999999999999987
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhccc-Ccchhhhh
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAML-CPTVLALV 280 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~ 280 (509)
.+.... ...+...+.. ..+++ +.|+||.+ |.+ .+ ||++ +++++++.+........ ......
T Consensus 182 ~~~~~~--~~~~~~~~~~-------~~d~~-~~s~sK~~-~~~-~g-g~~~---~~~~l~~~~~~~~~~~~~~~~~~~-- 243 (359)
T 3pj0_A 182 WEITPF--YQKSAEEICA-------LFDSV-YVSFYKGI-GGI-AG-AILA---GNDDFVQEAKIWKRRYGGDLISLY-- 243 (359)
T ss_dssp GGGHHH--HTCCHHHHHT-------TCSEE-EEESSSTT-CCS-SC-EEEE---ECHHHHHHHHHHHHHTTCCCSCCH--
T ss_pred hcchhh--hCCCHHHhhc-------cCCEE-EEeccccC-CCc-ce-EEEE---CCHHHHHHHHHHHHHhCCCcchhH--
Confidence 654211 1122333321 12244 45999998 434 23 7776 79999999987544221 111110
Q ss_pred ccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy13922 281 SLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEG 360 (509)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 360 (509)
.. +.+++. . ++.. . +..+.+.++++.+.+.|+++|+
T Consensus 244 --------------~~---------------~~a~~~-~----------l~~~---~-~~~~~~~~~~~~l~~~L~~~~g 279 (359)
T 3pj0_A 244 --------------PY---------------ILSADY-Y----------FEKR---I-GKMAEYFEAAKGLAERFNSCSG 279 (359)
T ss_dssp --------------HH---------------HHHHHH-H----------HHHH---G-GGHHHHHHHHHHHHHHHHTSTT
T ss_pred --------------HH---------------HHHHHH-H----------HHHH---H-HHhHHHHHHHHHHHHHHhhCCC
Confidence 00 111111 1 1212 1 2233457778889999999989
Q ss_pred Ceec-cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHH
Q psy13922 361 MSCN-PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIA 439 (509)
Q Consensus 361 ~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~ 439 (509)
+++. .+.++.++|++++.+... +...+.+.|.++||.++||..|+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~GV~v~~g~~~~~---------------------- 326 (359)
T 3pj0_A 280 VKTVPEVPVSNMFHVYFENSADE-----------IGAILTKIQDETGVGISGYLQEKS---------------------- 326 (359)
T ss_dssp EEEESSSCSSSEEEEEESSCHHH-----------HHHHHHHHHHHHCEECCSCCEEEE----------------------
T ss_pred ceeeccCCcceEEEEEecCccch-----------hHHHHHHHHHhcCcEecCCccccC----------------------
Confidence 9885 466667777777644311 122246677889999999987665
Q ss_pred HHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-----cChHHHHHHHHHHHHH
Q psy13922 440 KAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-----PQPEKLKAMLEKFREF 500 (509)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-----~~~~~i~~~~~~l~~~ 500 (509)
++.+ ++|+++. .+.+++++++++|.+.
T Consensus 327 --------------------------~~~~--------~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 327 --------------------------ADVC--------AFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp --------------------------TTEE--------EEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred --------------------------CCce--------EEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 3333 8999876 5889999999999875
No 123
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.95 E-value=3.7e-26 Score=240.10 Aligned_cols=331 Identities=12% Similarity=0.105 Sum_probs=219.0
Q ss_pred cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC-hhHHHHHHhcCC
Q psy13922 48 SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY-PLYSASLAEFNM 126 (509)
Q Consensus 48 ~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y-~~~~~~~~~~g~ 126 (509)
.|.+..+..++|++++++++ .+++++|+|+++++..++++++++| . +++.|+| ..+...+...|+
T Consensus 70 ~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~g-----d-i~~~~~~~~~~~~~~~~~G~ 135 (456)
T 2ez2_A 70 AYAGSENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPG-----Q-YVAGNMYFTTTRYHQEKNGA 135 (456)
T ss_dssp CSSSCHHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTT-----C-EEEESSCCHHHHHHHHHTTC
T ss_pred hcccChhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCC-----C-EeccccccchhHHHHHHcCC
Confidence 48888889999999999983 3489999999999999999997765 2 7889999 777888999999
Q ss_pred EEEEEecCCC----C----CCCCCHHHHHHHHHhhhccCCceEEEEeCCCC-CCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 127 EQIGYYLDES----K----QWGLPISELERSITEARKHCNPRAIVIINPGN-PTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 127 ~~~~v~~~~~----~----~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N-PtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
+++.++.+++ . +|.+|++.|++.+++..+ .++++|++++|+| |||.+++.+++++|+++|++||+++|+|
T Consensus 136 ~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~-~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~D 214 (456)
T 2ez2_A 136 VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA-ENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYD 214 (456)
T ss_dssp EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG-GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEecccccccccccccccCCCCHHHHHHHHHhccc-cceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 9999988732 1 368899999999986310 0248999999999 9999999999999999999999999999
Q ss_pred ccCCc----------ccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHh
Q psy13922 198 EVYQD----------NVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 198 eay~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~ 267 (509)
|+|.. +.+.+ .++.++....+. ..+++++ |++|.. | +| ++||++. .++++++.+...
T Consensus 215 e~~~~g~~~~~~~~~~~~~g----~~~~~~~~~~~~---~~d~~~~-S~kk~~-~-~~-~gG~~~~--~~~~~~~~~~~~ 281 (456)
T 2ez2_A 215 ATRCVENAYFIKEQEQGFEN----KSIAEIVHEMFS---YADGCTM-SGKKDC-L-VN-IGGFLCM--NDDEMFSSAKEL 281 (456)
T ss_dssp CTTHHHHHHHHHHHSTTCTT----SCHHHHHHHHHT---TCSEEEE-ETTTTT-C-CS-SCEEEEE--SCHHHHHHHHHH
T ss_pred ccccccccccccccccccCC----cchhhhhhhhcc---cCCEEEE-eCcccC-C-CC-ceeEEEE--CCHHHHHHHHHH
Confidence 99986 33432 122211101111 1236666 778876 4 67 7899972 378999888765
Q ss_pred hhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccc-hhhcccCCCCCCCCchHHHHHHH-HHHHHHHH
Q psy13922 268 ISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQT-VMDCVVNPPQPGEPSYEQFSREK-QSVLDSLK 345 (509)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-al~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 345 (509)
.....+....+ .+.... .++ ++... +++ +...+..+
T Consensus 282 ~~~~~~~~~~~-----------~~~~~~----------------~~a~a~~~~---------------~~~~~~~~~~~~ 319 (456)
T 2ez2_A 282 VVVYEGMPSYG-----------GLAGRD----------------MEAMAIGLR---------------EAMQYEYIEHRV 319 (456)
T ss_dssp HHHHTCCTTTT-----------TCCHHH----------------HHHHHHHHH---------------HHTCHHHHHHHH
T ss_pred HhhccCccccc-----------CcchhH----------------HHHHHHHHH---------------HHhHHHHHHHHH
Confidence 43211100000 000000 111 11100 111 23334445
Q ss_pred HHHHHHHHHHhcCCCCeeccCCceeEEeecCCC-CHHHHHHHhhcCCCCcHHH-----HHHHHhhcCeEEec-CCCCCCC
Q psy13922 346 QRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKL-PAKAIAKAKAEGKCPSVLY-----AFELLERTGICIVP-GAGFGQV 418 (509)
Q Consensus 346 ~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~g~~~~~~~-----~~~ll~~~gI~v~p-g~~f~~~ 418 (509)
++.+.+.+.|++. |+.+..+.+++++|+++.. +. +.. ...+ ...+++++||.+.+ |..|...
T Consensus 320 ~~~~~l~~~L~~~-g~~~~~p~~~~~~~~~~~~~~~---------~~~-~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~ 388 (456)
T 2ez2_A 320 KQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFCE---------HLT-QDEFPAQSLAASIYVETGVRSMERGIISAGR 388 (456)
T ss_dssp HHHHHHHHHHHHT-TCCBCSSCCSSEEEEEHHHHTT---------TSC-GGGCHHHHHHHHHHHHHSEECEEESHHHHCB
T ss_pred HHHHHHHHHHhcC-CCccccCCCceEEEEEhHHhcC---------CCC-hhhccHHHHHHHHHHhcCeeeeccccccccc
Confidence 5566777788776 7877778888999976530 00 111 2222 44555788999876 4433210
Q ss_pred CCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee---cChHHHHHHHH
Q psy13922 419 PGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL---PQPEKLKAMLE 495 (509)
Q Consensus 419 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~---~~~~~i~~~~~ 495 (509)
. +..+.+..++..++|+++. .++++++++++
T Consensus 389 ~----------------------------------------------~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~ 422 (456)
T 2ez2_A 389 N----------------------------------------------NVTGEHHRPKLETVRLTIPRRVYTYAHMDVVAD 422 (456)
T ss_dssp C----------------------------------------------TTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHH
T ss_pred C----------------------------------------------ccccccccCCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 0 0000001122338999999 69999999999
Q ss_pred HHHHHHHHHH
Q psy13922 496 KFREFHEEFL 505 (509)
Q Consensus 496 ~l~~~~~~~~ 505 (509)
+|++++++..
T Consensus 423 ~l~~~l~~~~ 432 (456)
T 2ez2_A 423 GIIKLYQHKE 432 (456)
T ss_dssp HHHHHHHTGG
T ss_pred HHHHHHhhhh
Confidence 9999987643
No 124
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.95 E-value=5.4e-28 Score=249.48 Aligned_cols=195 Identities=14% Similarity=0.130 Sum_probs=143.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc------CC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE------DV 100 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------~g 100 (509)
|+.+++++.+++....... ..| +.....++++.+++++ | .++|++|+|+++++..+++.+.. ++
T Consensus 58 ~~~v~~a~~~~~~~~~~~~-~~~-~~~~~~~l~~~la~~~----g----~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~ 127 (397)
T 2ord_A 58 HPRLVEAIKDQAEKLIHCS-NLF-WNRPQMELAELLSKNT----F----GGKVFFANTGTEANEAAIKIARKYGKKKSEK 127 (397)
T ss_dssp CHHHHHHHHHHHHHCSCCC-TTS-EEHHHHHHHHHHHHTT----T----SCEEEEESSHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHhcccCc-ccc-CCHHHHHHHHHHHHhc----C----CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCC
Confidence 7899999999988732111 113 2223344555555544 4 57999999999999999998864 43
Q ss_pred -CCCCCeEEEcCCCChhHH-HHHHhcCCE------------EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeC
Q psy13922 101 -DGKKPGVLIPIPQYPLYS-ASLAEFNME------------QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN 166 (509)
Q Consensus 101 -d~~~~~Vlv~~p~y~~~~-~~~~~~g~~------------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~ 166 (509)
+ .|+++.|+|++.. ..+...|.+ ++.++. .|++.|++.+++ ++++|++++
T Consensus 128 ~~----~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~-----~~~~v~~~~ 191 (397)
T 2ord_A 128 KY----RILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE-----DVCAVFLEP 191 (397)
T ss_dssp CC----EEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT-----TEEEEEECS
T ss_pred Cc----eEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc-----CeEEEEEec
Confidence 4 8999999997654 366667765 666653 279999998875 799999999
Q ss_pred CCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 167 PGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 167 p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
|+||||. +++.+++++|+++|+++|+++|+||+|.++.+.+ ...++..+. .. .+++ ||||.+ | +|
T Consensus 192 ~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g--~~~~~~~~~--~~-----~d~~---s~sK~~-~-~G 257 (397)
T 2ord_A 192 IQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTG--KLFAYQKYG--VV-----PDVL---TTAKGL-G-GG 257 (397)
T ss_dssp EECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SSSHHHHHT--CC-----CSEE---EECGGG-G-TT
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCc--cchhhhhhC--CC-----CCee---eecccc-C-CC
Confidence 9999999 9999999999999999999999999999876654 223333221 11 1233 779999 6 89
Q ss_pred CeeEEEeeecCCHHHHHHHH
Q psy13922 246 LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 246 lr~G~v~~~~~~~~~~~~l~ 265 (509)
+|+||++ .+++++ .+.
T Consensus 258 ~r~G~~~---~~~~~~-~l~ 273 (397)
T 2ord_A 258 VPIGAVI---VNERAN-VLE 273 (397)
T ss_dssp SCCEEEE---ECSTTC-CCC
T ss_pred cCeEEEE---EchHhc-ccC
Confidence 9999998 455555 443
No 125
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.95 E-value=3.1e-27 Score=239.95 Aligned_cols=305 Identities=13% Similarity=0.067 Sum_probs=203.9
Q ss_pred ccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH---HHHh
Q psy13922 47 GSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA---SLAE 123 (509)
Q Consensus 47 ~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~---~~~~ 123 (509)
..|++..+..++++.++++++ .+..++++|+++++..++++++.++| ++.|+++.+.|..... ....
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~--------~~~~i~~~~G~~a~~~al~~~~~~gd--~~~vi~~~~~~~~~~~~~~~~~~ 110 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLG--------MDDAVFFPSGTMAQQVALRIWSDETD--NRTVAYHPLCHLEIHEQDGLKEL 110 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHHHHHT--CCEEEECTTCHHHHSSTTHHHHH
T ss_pred ccccCChHHHHHHHHHHHHhC--------CCcEEEecCcHHHHHHHHHHHhhcCC--CcEEEecccceeeeeccchhhhc
Confidence 448877788999999999983 13345557778899999999988876 1145555555443322 3456
Q ss_pred cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC-CCCCCHHHHHHHHHHHHHCCcEEEEcccCCc
Q psy13922 124 FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPT-GQVLTKENIQDIIKFAHREKLFLFADEVYQD 202 (509)
Q Consensus 124 ~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt-G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~ 202 (509)
.|++++.++.+ ++.+|++.|++. . ++++|++++||||| |.+++.+++++|+++|++||++||+|++|..
T Consensus 111 ~g~~~~~v~~~---~~~~d~~~l~~~--~-----~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 180 (357)
T 3lws_A 111 HPIETILVGAA---DRLMTLDEIKAL--P-----DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLF 180 (357)
T ss_dssp SSCEEEECSCT---TSCCCHHHHHTC--C-----SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHH
T ss_pred cCcEEEEecCC---CCCcCHHHHhcC--c-----CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhh
Confidence 69999988743 347899999876 2 48999999999998 9999999999999999999999999999863
Q ss_pred ccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhccc-Ccchhhhhc
Q psy13922 203 NVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAML-CPTVLALVS 281 (509)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~ 281 (509)
..... ...+...+.. ..+++ +.|+||.++|+. .||++ +++++++.+.+...... +.....
T Consensus 181 ~~~~~--~~~~~~~~~~-------~~d~~-~~s~sK~~~~~~---gg~~~---~~~~~~~~~~~~~~~~~~~~~~~~--- 241 (357)
T 3lws_A 181 EMLPY--YEKTAAEIAG-------LFDSI-YISFYKGLGGIA---GAILA---GPAAFCQTARIWKRRYGGDLISLY--- 241 (357)
T ss_dssp HHHHH--HTCCHHHHHT-------TSSEE-EEESSSTTCCSS---CEEEE---ECHHHHHHHHHHHHHTTCCCSCCH---
T ss_pred hhhhh--cCCChHHHHh-------cCCEE-EEeccccCCCCc---eEEEE---cCHHHHHHHHHHHHHhcCCcccch---
Confidence 21110 0123333321 11244 679999994333 38887 79999999876654221 111110
Q ss_pred cccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy13922 282 LPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGM 361 (509)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 361 (509)
.. +.+++.. ++.+ .+++ +.+.++++.+.+.|+++|++
T Consensus 242 -------------~~---------------~~~~~~~-----------l~~~---~~~~-~~~~~~~~~l~~~L~~~~g~ 278 (357)
T 3lws_A 242 -------------PY---------------IVSADYY-----------YELR---KDRM-GQYYEQAKQLAEQFNALPGV 278 (357)
T ss_dssp -------------HH---------------HHHHHHH-----------HHHH---TTCH-HHHHHHHHHHHHHHHTSTTE
T ss_pred -------------HH---------------HHHHHHH-----------HHHH---HHHH-HHHHHHHHHHHHHHHhCCCC
Confidence 00 1111111 1111 2222 23567788899999999899
Q ss_pred ee-ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHH
Q psy13922 362 SC-NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAK 440 (509)
Q Consensus 362 ~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~ 440 (509)
++ ..+.+++++|++++.+... +... +.+.|.++||.++||..|.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~l~~~Gi~v~~g~~~~~----------------------- 324 (357)
T 3lws_A 279 HTTPEVPVSNMFHLHFDGQAAD----------ISPK-LEQVQEETGLGFVGYLVDKD----------------------- 324 (357)
T ss_dssp EEESSSCSSSEEEEEEESCHHH----------HHHH-HHHHHHHHCEESCSCCEECS-----------------------
T ss_pred eeccCCCcceEEEEEecCChHH----------HHHH-HHHHHHhcCeEEecccccCC-----------------------
Confidence 88 3566777889877632100 1223 45677889999999854332
Q ss_pred HhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-----cChHHHHHHHHHHHHHH
Q psy13922 441 AKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-----PQPEKLKAMLEKFREFH 501 (509)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-----~~~~~i~~~~~~l~~~~ 501 (509)
+ ..++|+++. .+.++|++++++|.+++
T Consensus 325 --------------------------~--------~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 325 --------------------------G--------YCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp --------------------------S--------EEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred --------------------------C--------ceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 2 228888876 58899999999998765
No 126
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.95 E-value=6.6e-28 Score=248.48 Aligned_cols=342 Identities=11% Similarity=0.040 Sum_probs=204.0
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCcccCCCCc----chHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh-
Q psy13922 23 DPRFPDDVKQRAQAVLDGCRGQSVGSYTDSP----GIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI- 97 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~----g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~- 97 (509)
+...|+.+++++.+.+..........|.... ...++++.+++++ | +++++|++|+|+++++..+++++.
T Consensus 29 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~~~~~v~~~~g~t~al~~~~~~l~~ 102 (400)
T 3vax_A 29 TTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV----S--AEPDELIFTSGATESNNIALLGLAP 102 (400)
T ss_dssp CSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT----T--CCGGGEEEESCHHHHHHHHHHTTHH
T ss_pred CCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc----C--CCCCcEEEeCCHHHHHHHHHHHHHH
Confidence 3456889999999988753211111122222 2344555555554 5 457899999999999999999997
Q ss_pred ---cCCCCCCC-eEEEcCCCChhHHHHHHh---cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 98 ---EDVDGKKP-GVLIPIPQYPLYSASLAE---FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 98 ---~~gd~~~~-~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
++| + .|+++.++|.++...+.. .|++++.++.++ ++.+|++.|++.+++ ++++|++++|+||
T Consensus 103 ~~~~~g----d~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~-----~~~~v~~~~~~np 171 (400)
T 3vax_A 103 YGERTG----RRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRP-----DTLLVSLMHVNNE 171 (400)
T ss_dssp HHHHHT----CCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCT-----TEEEEECCSBCTT
T ss_pred hhccCC----CCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCC-----CceEEEEECCCCC
Confidence 665 4 799999999987665554 699999999875 357899999999876 7999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 171 TGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
||.+++ +++|.++|+++|+++|+|++|..... ...+... ..+++.|+||.+ |++|+++++
T Consensus 172 tG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~-----~~~~~~~-----------~d~~~~s~~K~~-g~~g~g~~~ 231 (400)
T 3vax_A 172 TGVIQP---VAELAQQLRATPTYLHVDAAQGYGKV-----PGDLTTP-----------IDMISISGHKIG-APKGVGALV 231 (400)
T ss_dssp TCBBCC---HHHHHHHHTTSSCEEEEECTTTTTTS-----GGGGGSC-----------CSEEEEETGGGT-SCSSCEEEE
T ss_pred ceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCCC-----CcChhhc-----------CcEEEEeHHHhC-CCCceEEEE
Confidence 999988 78999999999999999999985321 1111110 135677999987 666765555
Q ss_pred EeeecCCHHHH---HHHHHhhh--------cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcc
Q psy13922 251 SEVINLDPGVK---AMLHKSIS--------AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCV 319 (509)
Q Consensus 251 v~~~~~~~~~~---~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 319 (509)
+ + .++.+. ..+..... ....++.. .+.++..+
T Consensus 232 ~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~a 274 (400)
T 3vax_A 232 T-R--RREEMDDERVPLEPIMFGGGQERKLRPGTLPVP----------------------------------LIMGLAEA 274 (400)
T ss_dssp E-C--BCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHH----------------------------------HHHHHHHH
T ss_pred E-e--cchhccccccccCceecCCCceeeeecCCCCHH----------------------------------HHHHHHHH
Confidence 1 2 442221 11111100 01112222 33333332
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCc---eeEEeecCCCCHHHHHHHhhcCCCCcHH
Q psy13922 320 VNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQG---AMYAFPQMKLPAKAIAKAKAEGKCPSVL 396 (509)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (509)
+ +...++++++++.++++++++.+.|+ .+++.+..+.+ +.++++.+. +. +.+.
T Consensus 275 l----------~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~ 330 (400)
T 3vax_A 275 A----------KIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFE------------DV-DAEA 330 (400)
T ss_dssp H----------HHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECT------------TC-CHHH
T ss_pred H----------HHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeC------------CC-CHHH
Confidence 2 22233478899999999999999999 88998876654 234444343 21 2344
Q ss_pred HHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCc
Q psy13922 397 YAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGT 476 (509)
Q Consensus 397 ~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (509)
+ ...|. +||.+++|..|.... ..|+ ..+...|+......+
T Consensus 331 l-~~~L~-~gi~v~~g~~~~~~~--------------------------~~~~-----~~~~~~g~~~~~~~~------- 370 (400)
T 3vax_A 331 F-LVTLK-DLVAVATGSASTSAS--------------------------FTPS-----HVLRAMGLPEEAASK------- 370 (400)
T ss_dssp H-HHHHH-HHHHHTTTTEEEEEE--------------------------ECCH-----HHHHTTTCCHHHHTS-------
T ss_pred H-HHHHh-cCcEEEecccccCCC--------------------------CCcc-----HHHHHcCCCccccCc-------
Confidence 3 45555 899999998765410 0000 000000000000012
Q ss_pred eeEEEEe-e--cChHHHHHHHHHHHHHHHH
Q psy13922 477 YHFRTTI-L--PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 477 ~~~Rls~-~--~~~~~i~~~~~~l~~~~~~ 503 (509)
++||++ . .+++++++++++|++++++
T Consensus 371 -~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 371 -SLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp -EEEEEEEEC--------------------
T ss_pred -eEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 999999 5 7889999999999988754
No 127
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.95 E-value=9.3e-27 Score=235.39 Aligned_cols=207 Identities=15% Similarity=0.130 Sum_probs=149.0
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
++.+++++.+... .. ..|.+..+..++|++++++++ .+++++++|+++++..+++++.++|| +
T Consensus 17 ~~~~~~a~~~~~~----~~-~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~~~~~~~~~gd----~ 79 (347)
T 1jg8_A 17 TEEMRKAMAQAEV----GD-DVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGNQVSIMAHTQRGD----E 79 (347)
T ss_dssp CHHHHHHHHTCCC----CC-GGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTC----E
T ss_pred CHHHHHHHhcCCC----CC-cccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHHHHHHHHhcCCCC----E
Confidence 4566666654321 12 248888888999999999983 24678888889999999999999988 9
Q ss_pred EEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh-ccCCceEEEEeCCCCCC-CCCCCHHHHH
Q psy13922 107 VLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR-KHCNPRAIVIINPGNPT-GQVLTKENIQ 181 (509)
Q Consensus 107 Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~-~~~~~~~ivi~~p~NPt-G~~~s~~~l~ 181 (509)
|+++.|+|.... ..+...|++++.+ .++ ++.+|++.|++.+++.. ..+++++|++++||||| |.+++.++++
T Consensus 80 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~ 156 (347)
T 1jg8_A 80 VILEADSHIFWYEVGAMAVLSGVMPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIK 156 (347)
T ss_dssp EEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred EEEcCcchhhhccccchhhccCeEEEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHH
Confidence 999999987643 2567789999988 433 34689999999886410 00158999999999999 9999999999
Q ss_pred HHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHH
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVK 261 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~ 261 (509)
+|+++|+++|+++|+|++|..+.... ...+...+... .+.+++ |+||.+ |.+ +|++++ .+++++
T Consensus 157 ~i~~~a~~~~~~li~D~a~~~~~~~~--~~~~~~~~~~~-------~d~~~~-s~sK~l-~~~---~G~~~~--~~~~~~ 220 (347)
T 1jg8_A 157 EICTIAKEHGINVHIDGARIFNASIA--SGVPVKEYAGY-------ADSVMF-CLSKGL-CAP---VGSVVV--GDRDFI 220 (347)
T ss_dssp HHHHHHHHHTCEEEEEETTHHHHHHH--HCCCHHHHHHT-------CSEEEE-ESSSTT-CCS---SCEEEE--ECHHHH
T ss_pred HHHHHHHHCCCEEEeehhhhhcchhh--cCCChHHhccc-------ccEEEE-eccccc-CCC---ceEEEE--cCHHHH
Confidence 99999999999999999875322110 01122332211 124444 899999 532 564332 688898
Q ss_pred HHHHHhhh
Q psy13922 262 AMLHKSIS 269 (509)
Q Consensus 262 ~~l~~~~~ 269 (509)
+.+...+.
T Consensus 221 ~~~~~~~~ 228 (347)
T 1jg8_A 221 ERARKARK 228 (347)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88876554
No 128
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.95 E-value=1.2e-26 Score=237.95 Aligned_cols=200 Identities=16% Similarity=0.101 Sum_probs=147.1
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
+++.+|+.+++++. . |. +...+++.+++++.+.+|.+ +++++++|+|+++++..+++++ +||
T Consensus 38 ~~~~~~~~v~~a~~----~--------~~---~~~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a~~~~~~~~--~gd 99 (374)
T 2aeu_A 38 GGFLIDEKDKALLN----T--------YI---GSSYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSAILATILAL--KPK 99 (374)
T ss_dssp CCCCCCHHHHHHHT----S--------TT---HHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHH--CCS
T ss_pred CCCCCCHHHHHHHH----H--------hc---CchHHHHHHHHHHHHHhCCC-CcceEEEEcChHHHHHHHHHhC--CCC
Confidence 46677889988884 1 21 11334566666665555643 3578999999999999999988 888
Q ss_pred CCCCeEEEcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceE-EEEeCCCCCCCCCCCH
Q psy13922 102 GKKPGVLIPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRA-IVIINPGNPTGQVLTK 177 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~-ivi~~p~NPtG~~~s~ 177 (509)
+|+++.|+|+++.. .++..|++++.+ .|++.|++. ++ ++++ |++++||||||. +.
T Consensus 100 ----~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~-----~~~~~v~~~~p~nptG~--~~ 158 (374)
T 2aeu_A 100 ----KVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-ID-----KDTLVIITGSTMDLKVI--EL 158 (374)
T ss_dssp ----EEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CC-----TTEEEEEECBCTTSCBC--CH
T ss_pred ----EEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CC-----CccEEEEEccCCCCCCC--Cc
Confidence 99999998776433 677789999887 178888877 33 7999 889999999997 77
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
.++++|.++|+++|+++|+||+|..+...+. ...+.... +. .++++|+||.+ +|+|+||++ .+
T Consensus 159 ~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~----~~------di~~~S~sK~l---~g~~~G~~~---~~ 221 (374)
T 2aeu_A 159 ENFKKVINTAKNKEAIVFVDDASGARVRLLF-NQPPALKL----GA------DLVVTSTDKLM---EGPRGGLLA---GK 221 (374)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTHHHHHHHT-TCCCHHHH----TC------SEEEEETTSSS---SSCSCEEEE---EE
T ss_pred ccHHHHHHHHHHcCCEEEEECCccccccccc-ccCCcccc----CC------cEEEecCcccc---cCcceEEEE---EC
Confidence 8999999999999999999999988642111 01112221 11 46678999986 468999998 68
Q ss_pred HHHHHHHHHhhhcc-cCcchh
Q psy13922 258 PGVKAMLHKSISAM-LCPTVL 277 (509)
Q Consensus 258 ~~~~~~l~~~~~~~-~~~~~~ 277 (509)
+++++.+......+ .+++.+
T Consensus 222 ~~~~~~l~~~~~~~~~~~~~~ 242 (374)
T 2aeu_A 222 KELVDKIYIEGTKFGLEAQPP 242 (374)
T ss_dssp HHHHHHHHHHHHTTTCBCCHH
T ss_pred HHHHHHHHHhhccccCCCCHH
Confidence 89999988766533 234444
No 129
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.95 E-value=2.7e-27 Score=241.93 Aligned_cols=306 Identities=12% Similarity=0.096 Sum_probs=213.2
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH---hh---cC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL---LI---ED 99 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~---l~---~~ 99 (509)
.|+.+.+++.+.+.... .....|+ ..+..++++++++++ |. +++|++|+|+++++..+++. +. ++
T Consensus 45 ~~~~v~~a~~~~~~~~~-~~~~~y~-~~~~~~l~~~la~~~----g~---~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~ 115 (375)
T 2eh6_A 45 AYPKLTEALKEQVEKLL-HVSNLYE-NPWQEELAHKLVKHF----WT---EGKVFFANSGTESVEAAIKLARKYWRDKGK 115 (375)
T ss_dssp SCHHHHHHHHHHHHHCS-CCCTTBC-CHHHHHHHHHHHHTS----SS---CEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhcc-ccCcccC-CHHHHHHHHHHHhhc----CC---CCeEEEeCchHHHHHHHHHHHHHHhccCCC
Confidence 46899999999987632 1223474 567788999999886 43 38999999999999999975 34 56
Q ss_pred C-CCCCCeEEEcCCCChhHHHHHHhcCCE-------------EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe
Q psy13922 100 V-DGKKPGVLIPIPQYPLYSASLAEFNME-------------QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII 165 (509)
Q Consensus 100 g-d~~~~~Vlv~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~ 165 (509)
| | .|+++.|+|+++...+...+.. +..++ ..|++.|++.+++ ++++|+++
T Consensus 116 g~~----~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~-----~~~~v~~~ 179 (375)
T 2eh6_A 116 NKW----KFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAK-------LNDIDSVYKLLDE-----ETAGIIIE 179 (375)
T ss_dssp CCC----EEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEEC-------TTCHHHHHTTCCT-----TEEEEEEC
T ss_pred CCC----EEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCC-------CchHHHHHHHhcC-----CeEEEEEe
Confidence 6 6 9999999999887665554322 22222 1489999988875 79999999
Q ss_pred CCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC
Q psy13922 166 NPGNPTGQV-LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC 244 (509)
Q Consensus 166 ~p~NPtG~~-~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~ 244 (509)
+|+||||.+ .+++++++|+++|+++|+++|+||+|.+|...+. ..++.. .+. ..+++ ||||.+ | +
T Consensus 180 ~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~----~~~---~~d~~---s~SK~~-~-~ 245 (375)
T 2eh6_A 180 VIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE--FYAYQH----FNL---KPDVI---ALAKGL-G-G 245 (375)
T ss_dssp SEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGG----GTC---CCSEE---EECGGG-G-T
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc--chhhhh----cCC---CCCEE---EEcccc-c-C
Confidence 999999998 5689999999999999999999999998755431 112211 110 12244 788999 6 7
Q ss_pred CCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCC
Q psy13922 245 GLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPP 323 (509)
Q Consensus 245 Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~ 323 (509)
|+|+||++ .++++++.+..... ...+.+.+ .+.++..+++
T Consensus 246 g~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~l~-- 286 (375)
T 2eh6_A 246 GVPIGAIL---AREEVAQSFTPGSHGSTFGGNPL----------------------------------ACRAGTVVVD-- 286 (375)
T ss_dssp TSCCEEEE---EEHHHHTTCCTTSCCCSSTTCHH----------------------------------HHHHHHHHHH--
T ss_pred CCCeEEEE---EcHHHHhhhcCCCCCCCCCCCHH----------------------------------HHHHHHHHHH--
Confidence 99999998 57777776654211 12223333 3333222221
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHh
Q psy13922 324 QPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLE 403 (509)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~ 403 (509)
. .++.++.++++++.+.+.|++++ ....++ .+.++|++++. +...+...+ .
T Consensus 287 ---------~---~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~g~~~~~~~~~--------------~~~~~~~~l-~ 337 (375)
T 2eh6_A 287 ---------E---VEKLLPHVREVGNYFKEKLKELG-KGKVKG-RGLMLGLELER--------------ECKDYVLKA-L 337 (375)
T ss_dssp ---------H---HHHHHHHHHHHHHHHHHHHHHTT-SSEEEE-ETTEEEEECSS--------------CCHHHHHHH-H
T ss_pred ---------H---HHHHHHHHHHHHHHHHHHHHHHh-cCCceE-EEEEEEEEEcC--------------cHHHHHHHH-H
Confidence 1 22667788888899999998874 333333 45677766641 234444444 4
Q ss_pred hcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEe
Q psy13922 404 RTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTI 483 (509)
Q Consensus 404 ~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~ 483 (509)
++||.+.|+. ++ ++|+++
T Consensus 338 ~~gi~~~~~~----------------------------------------------------~~----------~iRi~~ 355 (375)
T 2eh6_A 338 EKGLLINCTA----------------------------------------------------GK----------VLRFLP 355 (375)
T ss_dssp HTTEECEEET----------------------------------------------------TT----------EEEECC
T ss_pred HCCCEEecCC----------------------------------------------------CC----------EEEEEC
Confidence 6899998742 22 899996
Q ss_pred e--cChHHHHHHHHHHHHH
Q psy13922 484 L--PQPEKLKAMLEKFREF 500 (509)
Q Consensus 484 ~--~~~~~i~~~~~~l~~~ 500 (509)
. .+++++++++++|+++
T Consensus 356 ~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 356 PLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp CTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHh
Confidence 5 7999999999999875
No 130
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.95 E-value=1.6e-27 Score=242.00 Aligned_cols=337 Identities=12% Similarity=0.082 Sum_probs=214.5
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCC---CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCH-HHHHHHHHHHhh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTD---SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGA-SDGIKSVLKLLI 97 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~---~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~-~~al~~~~~~l~ 97 (509)
|++..|+.+++++.+.+.+......+.|.. ..+..++.+++.+.+.+.+|.. ++++|++|+|+ ++++..++..+.
T Consensus 10 g~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~gt~al~~~~~~l~ 88 (360)
T 1w23_A 10 GPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGGASLQFTMLPMNLL 88 (360)
T ss_dssp SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHHHC
T ss_pred CCcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCcchHHHHHHHHHhc
Confidence 556788999999998886521111111222 3344445555555555555653 45799999999 999999999998
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHH-HHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELER-SITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~-~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
.+++ +++.|+++.++|.. ...++..| +++.++.+++.+ .+|++.|++ .+++ ++++|++++|+||||.+++
T Consensus 89 ~~~~-~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~-----~~k~v~~~~~~nptG~~~~ 159 (360)
T 1w23_A 89 TKGT-IGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNE-----NDAYLHITSNNTIYGTQYQ 159 (360)
T ss_dssp CTTC-EEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCT-----TEEEEEEESEETTTTEECS
T ss_pred CCCC-cccEEEecchhHHH-HHHHHHhC-CeEEeecccccC-cCCccchHhhccCC-----CCCEEEEeCCCCCcceecc
Confidence 7653 22367777666654 34467789 999999875322 378888888 7754 7999999999999999987
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
++.+ ++|+++|+|++|..+... .++. + . .++++|+||.+ |++| +||++ .
T Consensus 160 --~i~~------~~~~~li~D~a~~~~~~~-----~~~~----~-------~-di~~~s~sK~~-~~~G--~G~~~---~ 208 (360)
T 1w23_A 160 --NFPE------INHAPLIADMSSDILSRP-----LKVN----Q-------F-GMIYAGAQKNL-GPSG--VTVVI---V 208 (360)
T ss_dssp --SCCC------CCSSCEEEECTTTTTSSC-----CCGG----G-------C-SEEEEETTTTT-SCTT--CEEEE---E
T ss_pred --cccc------cCCceEEEechhhcCCCC-----cCcc----c-------C-CEEEEEccccc-CCCC--cEEEE---E
Confidence 3332 799999999999875421 1211 1 1 24577999999 6666 89998 5
Q ss_pred CHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH-
Q psy13922 257 DPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR- 335 (509)
Q Consensus 257 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~- 335 (509)
++++++++..... +. .+.. .........++....++.++..+++ ...+
T Consensus 209 ~~~~~~~~~~~~~-~~-~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~al~----------~~~~~ 257 (360)
T 1w23_A 209 KKDLLNTKVEQVP-TM-LQYA-------------------THIKSDSLYNTPPTFSIYMLRNVLD----------WIKDL 257 (360)
T ss_dssp EHHHHCSCCTTCC-GG-GCHH-------------------HHHHTTTCSSCCCHHHHHHHHHHHH----------HHHHT
T ss_pred cHHHHhhcccCCc-ch-hhhh-------------------hhhhccCCCCCCCHHHHHHHHHHHH----------HHHHh
Confidence 7777665543210 00 0000 0000000001111112333333321 1111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCC-eec-cC--CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 336 -EKQSVLDSLKQRAKMVADTFNSIEGM-SCN-PV--QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 336 -~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~-~~--~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
+++++++.++++++.+.+.|++++++ ... .+ .+++++|++++-.. +..++. ..|.++||.+.
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-~~l~~~gi~~~ 324 (360)
T 1w23_A 258 GGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEE------------LNQQFL-AKAKEQGFVGL 324 (360)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHH------------HHHHHH-HHHHHTTEESC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCCc------------cHHHHH-HHHHHCCeeee
Confidence 36788899999999999999998655 543 23 35668887664110 123333 34667899998
Q ss_pred cCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChH
Q psy13922 411 PGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPE 488 (509)
Q Consensus 411 pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~ 488 (509)
||..+ ++ ++|+++. ++++
T Consensus 325 ~~~~~--------------------------------------------------~~----------~iRis~~~~~~~~ 344 (360)
T 1w23_A 325 NGHRS--------------------------------------------------VG----------GCRASIYNAVPID 344 (360)
T ss_dssp BCCTT--------------------------------------------------TC----------SEEEECCTTSCHH
T ss_pred cCCCC--------------------------------------------------CC----------eEEEEecCCCCHH
Confidence 76632 12 8999998 6899
Q ss_pred HHHHHHHHHHHHHHH
Q psy13922 489 KLKAMLEKFREFHEE 503 (509)
Q Consensus 489 ~i~~~~~~l~~~~~~ 503 (509)
++++++++|++++++
T Consensus 345 ~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 345 ACIALRELMIQFKEN 359 (360)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988764
No 131
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.95 E-value=1.1e-26 Score=240.09 Aligned_cols=296 Identities=16% Similarity=0.116 Sum_probs=202.8
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~g 100 (509)
+.|.+|+.+++++.+.+.. . .|.+..+..+++++++++++ .+++++++|+++++..+++++ .++|
T Consensus 38 ~~~~~~~~v~~a~~~~~~~---~---~y~~~~~~~~l~~~la~~~~--------~~~~v~~~~Gt~a~~~~l~~~~~~~g 103 (399)
T 2oga_A 38 AYEELRAETDAAIARVLDS---G---RYLLGPELEGFEAEFAAYCE--------TDHAVGVNSGMDALQLALRGLGIGPG 103 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHH---T---CCSSSHHHHHHHHHHHHHTT--------SSEEEEESCHHHHHHHHHHHTTCCTT
T ss_pred CCCCCCHHHHHHHHHHHhc---C---CCCCchhHHHHHHHHHHHHC--------CCeEEEecCHHHHHHHHHHHhCCCCc
Confidence 4555678899999888876 2 37667888999999999983 126788888899999999999 7888
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
| .|+++.|+|.++...++..|.+++.++.+++ ++.+|++.|++.+++ ++++|+ |+||||...+ +
T Consensus 104 d----~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~-----~~~~v~---~~n~tG~~~~---l 167 (399)
T 2oga_A 104 D----EVIVPSHTYIASWLAVSATGATPVPVEPHED-HPTLDPLLVEKAITP-----RTRALL---PVHLYGHPAD---M 167 (399)
T ss_dssp C----EEEEESSSCTHHHHHHHHTTCEEEEECBCSS-SSSBCHHHHHHHCCT-----TEEEEC---CBCGGGCCCC---H
T ss_pred C----EEEECCCccHHHHHHHHHCCCEEEEEecCCC-CCCcCHHHHHHhcCC-----CCeEEE---EeCCcCCccC---H
Confidence 7 9999999999999999999999999998753 468999999999876 688777 5789999877 8
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec--ccccCCCCCCeeEEEeeecCCH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC--SKGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~G~~Glr~G~v~~~~~~~ 258 (509)
++|.++|+++|+++|+|++|..+..... ..+..+ . .+++.|+ ||.+ |.+| |+||++. .++
T Consensus 168 ~~i~~l~~~~~~~li~Dea~~~g~~~~~---~~~~~~----------~-di~~~S~~~sK~~-~~~G-~~g~~~~--~~~ 229 (399)
T 2oga_A 168 DALRELADRHGLHIVEDAAQAHGARYRG---RRIGAG----------S-SVAAFSFYPGKNL-GCFG-DGGAVVT--GDP 229 (399)
T ss_dssp HHHHHHHHHHTCEECEECTTCTTCEETT---EETTCT----------T-CEEEEECCTTSSS-CCSS-CCEEEEE--SCH
T ss_pred HHHHHHHHHcCCEEEEECcccccCccCC---eecccc----------c-CEEEEeCCCCccC-CcCC-ceEEEEe--CCH
Confidence 9999999999999999999987642211 111000 1 3556688 7999 7679 9999973 468
Q ss_pred HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 259 GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 259 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
++++.+......... .... ..... ..+.-... ..+++... .++++
T Consensus 230 ~~~~~l~~~~~~g~~-~~~~----~~~~g-~~~~~~~~---------------~~a~~~~~--------------l~~~~ 274 (399)
T 2oga_A 230 ELAERLRMLRNYGSR-QKYS----HETKG-TNSRLDEM---------------QAAVLRIR--------------LAHLD 274 (399)
T ss_dssp HHHHHHHHHHBTTCS-STTC----CCSCC-CBCCCCHH---------------HHHHHHHH--------------HHTHH
T ss_pred HHHHHHHHHHhcCcc-cccc----ccccc-cCCCcCHH---------------HHHHHHHH--------------HHHHH
Confidence 999888765442110 0000 00000 00000000 11111111 12244
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeec-cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEGMSCN-PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPG 412 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg 412 (509)
...+..+++.+.+.+.|.++|++++. .+.++.++|+.+.++ + .+... +...|.++||.+.++
T Consensus 275 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~----------~-~~~~~-l~~~L~~~gI~v~~~ 337 (399)
T 2oga_A 275 SWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVR----------T-ERRDE-LRSHLDARGIDTLTH 337 (399)
T ss_dssp HHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEE----------C-SSHHH-HHHHHHHTTBCCBCS
T ss_pred HHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEE----------C-CCHHH-HHHHHHHCCCceecC
Confidence 55566677788899999988888764 345556665433321 1 12333 345566789999874
No 132
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.95 E-value=3.7e-26 Score=244.19 Aligned_cols=349 Identities=12% Similarity=0.066 Sum_probs=230.3
Q ss_pred HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcE--EEeCCHHHHHHHHHHHhhcCCC----
Q psy13922 28 DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDV--ILSAGASDGIKSVLKLLIEDVD---- 101 (509)
Q Consensus 28 ~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i--~~t~G~~~al~~~~~~l~~~gd---- 101 (509)
+.+.+.+.+++..........|....+..++++++++++.+.+|.+.+++++ ++|+|+++++..+++++++++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g 189 (514)
T 3mad_A 110 EHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKG 189 (514)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcC
Confidence 4444555555443222223335556677889999999998888866655778 9999999999999999987650
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
..++.|+++.|+|.++...++..|.+++.++.++ ++.+|++.|++++++ ++++|++++|+||||.+.+ ++
T Consensus 190 ~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~-----~~~~v~~~~~~nptG~~~~---l~ 259 (514)
T 3mad_A 190 ITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDA--DYRADVAAMREAITP-----NTVVVAGSAPGYPHGVVDP---IP 259 (514)
T ss_dssp CSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCT--TSCBCHHHHHHHCCT-----TEEEEEEETTCTTTCCCCC---HH
T ss_pred CCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCC--CCCCCHHHHHHHhcc-----CCEEEEEeCCCCCCccccC---HH
Confidence 0113999999999999999999999999999876 468999999999987 7999999999999999987 88
Q ss_pred HHHHHHHHCCcEEEEcccCCccccc--C--CCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYA--E--GSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+|.++|++||+++|+|++|.++.+. . +.....+. ....+. .+++.|++|.+. +|.++|++++ .+
T Consensus 260 ~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~-------~~~~g~-d~~~~s~~K~l~--~~~~~g~~~~--~~ 327 (514)
T 3mad_A 260 EIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD-------FRLEGV-TSVSADTHKYGY--GAKGTSVILY--RR 327 (514)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS-------TTSTTC-CEEEECTTTTTC--CCSSCEEEEE--SS
T ss_pred HHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc-------ccCCCC-cEEEECchhccC--CCCCeEEEEE--eC
Confidence 9999999999999999999987541 0 00000110 001122 344569999963 6788999974 55
Q ss_pred HHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 258 PGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 258 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
+.+..........+...... ...+. +........++..++. .-...++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~----------~~~~~-------------gs~~~~~~~a~~aal~---------~l~~~~~ 375 (514)
T 3mad_A 328 PDLLHYQYFIAADWPGGLYF----------SPTFA-------------GSRPGALSATAWAAML---------SLGEEGY 375 (514)
T ss_dssp HHHHTTTCEEESSCTTCSEE----------ESSSC-------------SSCCHHHHHHHHHHHH---------HHHHHHH
T ss_pred HHHhccccccccccCCCccc----------CCccC-------------CCCchHHHHHHHHHHH---------HHhHHHH
Confidence 54433211101001000000 00000 0000000111111111 0012236
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
+++.+.+.++++++.+.|++++++++..+..+ ++|+... +. +..+ +.+.|.++||.+ +|..|..
T Consensus 376 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~------------~~-~~~~-l~~~L~~~Gi~v-~g~~~~~ 439 (514)
T 3mad_A 376 LDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASD------------EL-NIYQ-VMEEMAGRGWRL-NGLHRPP 439 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECS------------SS-CHHH-HHHHHHTTTCBC-EEETTTT
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCC------------CC-CHHH-HHHHHHhcCCEe-ccCCCCC
Confidence 78888899999999999999989988766655 4454332 11 2334 345556679987 4432222
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee---cChHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL---PQPEKLKAML 494 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~---~~~~~i~~~~ 494 (509)
++|+++. .+++++++++
T Consensus 440 ------------------------------------------------------------~~Ri~~~~~~~~~e~i~~~l 459 (514)
T 3mad_A 440 ------------------------------------------------------------AFHVALTLRHTEPGVVDRFL 459 (514)
T ss_dssp ------------------------------------------------------------EEEEECCGGGGSTTHHHHHH
T ss_pred ------------------------------------------------------------eEEEEEecCCCCHHHHHHHH
Confidence 7888887 4669999999
Q ss_pred HHHHHHHHHHHh
Q psy13922 495 EKFREFHEEFLA 506 (509)
Q Consensus 495 ~~l~~~~~~~~~ 506 (509)
++|++++++..+
T Consensus 460 ~~L~~~l~~~~~ 471 (514)
T 3mad_A 460 ADLQDAVAQVRA 471 (514)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999987764
No 133
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.95 E-value=9e-27 Score=235.85 Aligned_cols=325 Identities=13% Similarity=0.099 Sum_probs=219.1
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKP 105 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~ 105 (509)
.|+.+++++.+.+.. ....|++.....++++.+++++ | ...+|++|+|+++++..++++++++||
T Consensus 20 ~~~~v~~a~~~~~~~----~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~~~al~~~~~~gd---- 84 (356)
T 1v72_A 20 ASPEVAQALVKHSSG----QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAANALCLSAMTPPWG---- 84 (356)
T ss_dssp CCHHHHHHHHHTTSS----CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHHHHHHHTSCCTTE----
T ss_pred CCHHHHHHHHhhccC----cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHHHHHHHHhcCCCC----
Confidence 368888888777532 2234765555566777777666 5 244699999999999999999988888
Q ss_pred eEEEcCCCChhHHHH--HHhc--CCEEEEEecCCCCCCCCCHHHHHH-HHHhhh--ccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 106 GVLIPIPQYPLYSAS--LAEF--NMEQIGYYLDESKQWGLPISELER-SITEAR--KHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~--~~~~--g~~~~~v~~~~~~~~~~d~~~L~~-~i~~~~--~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
.|+++.|+|..+... +... |.+++.++.+. +.+|++.|++ .+++.. ...++++|++++|+| ||.+++.+
T Consensus 85 ~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~ 160 (356)
T 1v72_A 85 NIYCHPASHINNDECGAPEFFSNGAKLMTVDGPA---AKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLD 160 (356)
T ss_dssp EEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGG---GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHH
T ss_pred EEEEcCccchhhhhchHHHHHhCCcEEEEecCCC---CeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHH
Confidence 999999999876655 6777 99999988752 5899999998 886410 112578999999987 99999999
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCccccc-CCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYA-EGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
++++|+++|++||+++|+|++|..+... .+... ....+ +. ..+++++ |+||. |. .+..||++ .+
T Consensus 161 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~--~~-----~~d~~~~-s~sK~--g~-~~G~g~~~---~~ 225 (356)
T 1v72_A 161 EIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSP-AEMTW--KA-----GVDALSF-GATKN--GV-LAAEAIVL---FN 225 (356)
T ss_dssp HHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCT-TTTTG--GG-----TCCEEEE-CCGGG--TC-SSCEEEEE---SS
T ss_pred HHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCH-HHhhh--hh-----cCCEEEE-ecccC--CC-cCccEEEE---EC
Confidence 9999999999999999999999765321 01011 10000 00 1235544 89997 32 23334776 68
Q ss_pred HHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 258 PGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 258 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
+++++.+.............+.. +..+....++ + . ..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~l~-----~---~----~~ 262 (356)
T 1v72_A 226 TSLATEMSYRRKRAGHLSSKMRF-------------------------------LSAQIDAYLT-----D---D----LW 262 (356)
T ss_dssp GGGHHHHHHHHHHTTCCCSSTHH-------------------------------HHHHHHHHTS-----T---T----HH
T ss_pred HHHHhhHHHHhhccCchhhhHHH-------------------------------HHHHHHHHHH-----h---h----hH
Confidence 88888876553311111110000 1111111111 0 0 12
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCC
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQ 417 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~ 417 (509)
....+.++++++++.+.|++++|+++..+.+++++|++++ . . +...|.++||.+.||. |+.
T Consensus 263 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~--~---------------~-~~~~l~~~gi~v~~g~-~~~ 323 (356)
T 1v72_A 263 LRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD--S---------------A-MIDALLKAGFGFYHDR-WGP 323 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC--H---------------H-HHHHHHHTTCBCBCSS-SST
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC--H---------------H-HHHHHHhcCeEEeccc-cCC
Confidence 3445667888899999999888888876777888887653 1 2 2344567799999876 321
Q ss_pred CCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHH
Q psy13922 418 VPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLE 495 (509)
Q Consensus 418 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~ 495 (509)
+ ++|+++. +++++++++++
T Consensus 324 -------------------------------------------------~----------~iRi~~~~~~~~~~i~~~~~ 344 (356)
T 1v72_A 324 -------------------------------------------------N----------VVRFVTSFATTAEDVDHLLN 344 (356)
T ss_dssp -------------------------------------------------T----------EEEEECCTTCCHHHHHHHHH
T ss_pred -------------------------------------------------C----------eEEEEecCCCCHHHHHHHHH
Confidence 1 8999976 68999999999
Q ss_pred HHHHHHHHHH
Q psy13922 496 KFREFHEEFL 505 (509)
Q Consensus 496 ~l~~~~~~~~ 505 (509)
+|++++++..
T Consensus 345 ~l~~~l~~~~ 354 (356)
T 1v72_A 345 QVRLAADRTQ 354 (356)
T ss_dssp HHHHTC----
T ss_pred HHHHHHHhhc
Confidence 9999887654
No 134
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.95 E-value=3e-26 Score=241.44 Aligned_cols=346 Identities=10% Similarity=-0.012 Sum_probs=221.4
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
|+.+++++.+++.+.. .. |....+..++++++++.+.+.++ ...++|++|+|+++|+..+++.++.. |.+
T Consensus 69 ~p~v~~A~~~~~~~~~---~~-~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~ 142 (460)
T 3gju_A 69 RQKIADAIATQAKNLA---YY-HAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSDANETNIKLIWYYNNVLGRP 142 (460)
T ss_dssp CHHHHHHHHHHHHHHS---CC-CCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhcc---cc-ccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 7899999999988732 11 33334445667777777766543 45679999999999999999998751 111
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCC--C-CCCCCC--------HHHHHHHHHhhhccCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDE--S-KQWGLP--------ISELERSITEARKHCN 158 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~--~-~~~~~d--------~~~L~~~i~~~~~~~~ 158 (509)
.++.|++..|+|+++...+...+. .+..++... . +.++.+ ++.|++.+++... .+
T Consensus 143 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~-~~ 221 (460)
T 3gju_A 143 EKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGP-ET 221 (460)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCG-GG
T ss_pred CCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCC-CC
Confidence 234999999999987765544321 234444221 1 112334 5888888874211 15
Q ss_pred ceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 159 PRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
+++|+++.++|++|. +++++++++|.++|++||+++|+||+|.+|...+. ....... ++.+ + +.+||
T Consensus 222 ~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~--~~~~~~~--~~~p-----d---i~t~s 289 (460)
T 3gju_A 222 IAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGT--MFGSDHY--GIKP-----D---LITIA 289 (460)
T ss_dssp EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SCHHHHH--TCCC-----S---EEEEC
T ss_pred EEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc--cchHhhc--CCCC-----C---eeeee
Confidence 777778777888887 77889999999999999999999999999876542 2222221 2211 1 33789
Q ss_pred cccCCCCC-CeeEEEeeecCCHHHHHHHHHh-------h-hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccC
Q psy13922 238 KGYMGECG-LRGGYSEVINLDPGVKAMLHKS-------I-SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRG 308 (509)
Q Consensus 238 K~~~G~~G-lr~G~v~~~~~~~~~~~~l~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (509)
|.+ | +| +|+||++ +++++++.+... . ..+++.+.+++.+
T Consensus 290 K~l-~-gG~~~lg~v~---~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aa--------------------------- 337 (460)
T 3gju_A 290 KGL-T-SAYAPLSGVI---VADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAA--------------------------- 337 (460)
T ss_dssp GGG-T-TTSSCCEEEE---EEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHH---------------------------
T ss_pred hhh-c-CCCCCeEEEE---ECHHHHHHHhcccccccccccCCCCCCCHHHHHH---------------------------
Confidence 999 4 56 8999998 799999998642 1 1234455552222
Q ss_pred cccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhh
Q psy13922 309 QSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKA 388 (509)
Q Consensus 309 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 388 (509)
+.+++..+.+ .+.++++++....+++.+.+.+.+.|.+..+.+.|.++ ++++..... .+
T Consensus 338 ---a~aal~~~~~------------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~-----~~ 396 (460)
T 3gju_A 338 ---GVANLELIDE------------MDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGMLA-AVEFVADKD-----DR 396 (460)
T ss_dssp ---HHHHHHHHHH------------TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEE-EEEECSBTT-----TT
T ss_pred ---HHHHHHHHHh------------ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEEE-EEEEccCcc-----cc
Confidence 2233322211 11245566666666677777777776666666666554 444431110 00
Q ss_pred cCCCC----cHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccc
Q psy13922 389 EGKCP----SVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICI 464 (509)
Q Consensus 389 ~g~~~----~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (509)
....+ ... +...|.++||.++|+. .
T Consensus 397 ~~~~~~~~~~~~-~~~~l~~~Gv~v~~~~---~----------------------------------------------- 425 (460)
T 3gju_A 397 VFFDASQKIGPQ-VATALAASGVIGRAMP---Q----------------------------------------------- 425 (460)
T ss_dssp BCCCGGGCHHHH-HHHHHHHTTEECEECS---S-----------------------------------------------
T ss_pred ccccchHHHHHH-HHHHHHHCCeEEecCC---C-----------------------------------------------
Confidence 00000 123 3455556799999854 1
Q ss_pred cCCCCCCCCCCceeEEEE--eecChHHHHHHHHHHHHHHHHHHh
Q psy13922 465 VPGAGFGQVPGTYHFRTT--ILPQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 465 ~~~~~~~~~~~~~~~Rls--~~~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
.+ ++||+ +..++++|++++++|++++++..+
T Consensus 426 -~~----------~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 426 -GD----------ILGFAPPLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp -SC----------EEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred -CC----------EEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 12 89999 568999999999999999987754
No 135
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.95 E-value=1e-26 Score=242.60 Aligned_cols=326 Identities=12% Similarity=0.116 Sum_probs=209.7
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh---c----
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI---E---- 98 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~---- 98 (509)
.|+.+++++.+++..........|+. ....++++.+++++ + +.+++|++|+|++++++.+++++. +
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~--~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~ 132 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT----P--QPLECVFLADSGSVAVEVAMKMALQYWQAKGE 132 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS----C--TTCCEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC----C--CCCCEEEEeCCHHHHHHHHHHHHHHHhcccCC
Confidence 37899999999997732111223432 22355666666655 4 467899999999999999998764 2
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhc----------------CCEEEEEecCC-CCCC-CCCHHHHHHHHHhhhccCCce
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEF----------------NMEQIGYYLDE-SKQW-GLPISELERSITEARKHCNPR 160 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~----------------g~~~~~v~~~~-~~~~-~~d~~~L~~~i~~~~~~~~~~ 160 (509)
+++ .|+++.|+|+++...+... +...+.++... +..| .+|++.|++.+++.. .+++
T Consensus 133 ~~~----~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~~ 206 (429)
T 1s0a_A 133 ARQ----RFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR--HEIA 206 (429)
T ss_dssp CCC----EEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT--TTEE
T ss_pred CCC----eEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCC--CCEE
Confidence 455 9999999999865533321 23344333211 1134 478999999997421 1466
Q ss_pred EEEEeCC-CCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 161 AIVIINP-GNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 161 ~ivi~~p-~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
+|+++.. +||||. ..+++++++|.++|++||+++|+||+|.+|...+. ..++... +.. .+++ |+||
T Consensus 207 ~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~--~~~~~~~--~~~-----~d~~---t~sK 274 (429)
T 1s0a_A 207 AVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK--LFACEHA--EIA-----PDIL---CLGK 274 (429)
T ss_dssp EEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGG--TCC-----CSEE---EECG
T ss_pred EEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccch--HHHhhhc--CCC-----CCEE---Eecc
Confidence 6555544 799996 66788899999999999999999999998765432 1111111 111 1233 7899
Q ss_pred ccCCCCC-CeeEEEeeecCCHHHHHHHHHh------hhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCccc
Q psy13922 239 GYMGECG-LRGGYSEVINLDPGVKAMLHKS------ISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSV 311 (509)
Q Consensus 239 ~~~G~~G-lr~G~v~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (509)
.+ | +| +|+||++ .++++++.+... .....+.+.+
T Consensus 275 ~l-~-~G~~~iG~~~---~~~~~~~~l~~~~~~~~~~~~t~~~n~~---------------------------------- 315 (429)
T 1s0a_A 275 AL-T-GGTMTLSATL---TTREVAETISNGEAGCFMHGPTFMGNPL---------------------------------- 315 (429)
T ss_dssp GG-G-TSSSCCEEEE---ECHHHHHHHHTSTTSSCSCCCTTTTCHH----------------------------------
T ss_pred cc-c-CCCccceEEE---eCHHHHHHhhcCCCcccccCCCCCCCHH----------------------------------
Confidence 99 5 68 9999998 688998888753 1123334454
Q ss_pred ccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeeccCCceeEEeecCCCCHHHHHHHhh
Q psy13922 312 GQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSI---EGMSCNPVQGAMYAFPQMKLPAKAIAKAKA 388 (509)
Q Consensus 312 ~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 388 (509)
+++++.++++ ..+ -+...+.++++++.+.+.|+++ |++....+.| .++|+++.-+
T Consensus 316 ~~~a~~aal~-----------~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g-~~~~~~~~~~--------- 373 (429)
T 1s0a_A 316 ACAAANASLA-----------ILE-SGDWQQQVADIEVQLREQLAPARDAEMVADVRVLG-AIGVVETTHP--------- 373 (429)
T ss_dssp HHHHHHHHHH-----------HHH-TCHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEET-TEEEEEESSC---------
T ss_pred HHHHHHHHHH-----------HHH-hCCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEee-EEEEEEECCc---------
Confidence 3333333221 000 0234566667778888888765 4554444554 4677666411
Q ss_pred cCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCC
Q psy13922 389 EGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGA 468 (509)
Q Consensus 389 ~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (509)
.+...+... |.++||.+.|+ +
T Consensus 374 ---~~~~~l~~~-l~~~Gi~v~~~---~---------------------------------------------------- 394 (429)
T 1s0a_A 374 ---VNMAALQKF-FVEQGVWIRPF---G---------------------------------------------------- 394 (429)
T ss_dssp ---BCHHHHHHH-HHHTTEECCCB---T----------------------------------------------------
T ss_pred ---ccHHHHHHH-HHHCCCEEecc---C----------------------------------------------------
Confidence 123344444 44679998752 1
Q ss_pred CCCCCCCceeEEEEe--ecChHHHHHHHHHHHHHHHHH
Q psy13922 469 GFGQVPGTYHFRTTI--LPQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 469 ~~~~~~~~~~~Rls~--~~~~~~i~~~~~~l~~~~~~~ 504 (509)
+ ++|+++ ..+++++++++++|+++++++
T Consensus 395 ~--------~iRis~~~~~t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 395 K--------LIYLMPPYIILPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp T--------EEEECCCTTCCHHHHHHHHHHHHHHTSSG
T ss_pred C--------EEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 1 899995 589999999999999987543
No 136
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.95 E-value=9.8e-27 Score=242.89 Aligned_cols=210 Identities=9% Similarity=0.031 Sum_probs=141.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-C-CCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-D-VDGKK 104 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~-gd~~~ 104 (509)
|+.+++++.+++..... ....|+ .+++.++++.+.+.++ ..+++|++|+|+++++..+++.+.. + ++
T Consensus 61 ~p~v~~a~~~~~~~~~~-~~~~~~-----~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~--- 129 (433)
T 1zod_A 61 HPEIVSVIGEYAGKLDH-LFSEML-----SRPVVDLATRLANITP--PGLDRALLLSTGAESNEAAIRMAKLVTGKY--- 129 (433)
T ss_dssp CHHHHHHHHHHHHHCCC-CCTTCC-----CHHHHHHHHHHHHHSC--TTCCEEEEESCHHHHHHHHHHHHHHHHTCC---
T ss_pred CHHHHHHHHHHHHhCcc-cccccC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHHHHHHHHHHHhhCCC---
Confidence 78999999999877321 112233 2344444444444445 3568999999999999999987642 3 34
Q ss_pred CeEEEcCCCChhHHHHHHhc--------------CCEEEEEecCCCCCCC--------CCHHHHHHHHHhhhccCCceEE
Q psy13922 105 PGVLIPIPQYPLYSASLAEF--------------NMEQIGYYLDESKQWG--------LPISELERSITEARKHCNPRAI 162 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~--------------g~~~~~v~~~~~~~~~--------~d~~~L~~~i~~~~~~~~~~~i 162 (509)
.|++..|+|+++...+... |...+.++......|. +|++.|++.+++.. ..++++|
T Consensus 130 -~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~~v 207 (433)
T 1zod_A 130 -EIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQS-SGNLAAF 207 (433)
T ss_dssp -EEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHC-CSCEEEE
T ss_pred -eEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcC-CCCeEEE
Confidence 8999999998865543322 4444433321111122 36899999987521 0156666
Q ss_pred EEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 163 VIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 163 vi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
+++..+||||. ..+++++++|.++|++||+++|+||+|.+|.+.+. ...+... +... + +.|+||.+
T Consensus 208 i~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~--~~~~~~~--~~~~-----d---i~s~sK~~- 274 (433)
T 1zod_A 208 IAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGT--MFACQRD--GVTP-----D---ILTLSKTL- 274 (433)
T ss_dssp EECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHHH--TCCC-----S---EEEECHHH-
T ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCch--HhHHhhc--CCCC-----C---EEEecccc-
Confidence 65444688996 67889999999999999999999999998865532 2222211 1111 1 34889999
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
| +|+|+||++ .++++++.+..
T Consensus 275 ~-~G~~ig~~~---~~~~~~~~~~~ 295 (433)
T 1zod_A 275 G-AGLPLAAIV---TSAAIEERAHE 295 (433)
T ss_dssp H-TTSSCEEEE---ECHHHHHHHHH
T ss_pred c-CCCCeeEEE---EhHHHHHhhcc
Confidence 5 599999998 68899998876
No 137
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.95 E-value=8.1e-26 Score=232.44 Aligned_cols=363 Identities=12% Similarity=0.093 Sum_probs=230.5
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~g 100 (509)
+.|.+|+.+++++.+.+.+ .. |.+..+..+++++++++++ .+++++|+|+++++..+++++ .++|
T Consensus 14 ~~p~~~~~~~~a~~~~~~~---~~---~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~~~~~~~~~~g 79 (393)
T 1mdo_A 14 SRPAMGAEELAAVKTVLDS---GW---ITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHIALMALGIGEG 79 (393)
T ss_dssp CCCCCCHHHHHHHHHHHHH---TC---CSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTT
T ss_pred CCCCCCHHHHHHHHHHHhc---CC---cCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHHHHHHcCCCCC
Confidence 4478999999999999877 22 3456788999999999993 247999999999999999999 8888
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
| .|+++.|+|.++...++..|++++.++.+++ ++.+|++.|++.+++ ++++|+++ ||+|...+ +
T Consensus 80 d----~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~-----~~~~v~~~---~~~G~~~~---~ 143 (393)
T 1mdo_A 80 D----EVITPSMTWVSTLNMIVLLGANPVMVDVDRD-TLMVTPEHIEAAITP-----QTKAIIPV---HYAGAPAD---L 143 (393)
T ss_dssp C----EEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCT-----TEEEECCB---CGGGCCCC---H
T ss_pred C----EEEeCCCccHhHHHHHHHCCCEEEEEeccCC-cCCCCHHHHHHhcCC-----CceEEEEe---CCCCCcCC---H
Confidence 8 9999999999999999999999999998754 467999999999876 68888875 48999876 8
Q ss_pred HHHHHHHHHCCcEEEEcccCCcc-cccCCCccccHHHHHHHhCCCCCCceeEEEEecc--cccCCCCCCeeEEEeeecCC
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDN-VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS--KGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~G~~Glr~G~v~~~~~~ 257 (509)
++|.++|+++|+++|+|++|..+ .+.+ . ++ +. ..+++.|+| |.+ +|.|+||++. .+
T Consensus 144 ~~i~~l~~~~~~~li~D~a~~~g~~~~~--~--~~-------~~-----~d~~~~S~~k~K~l---~~~~~g~~~~--~~ 202 (393)
T 1mdo_A 144 DAIYALGERYGIPVIEDAAHATGTSYKG--R--HI-------GA-----RGTAIFSFHAIKNI---TCAEGGIVVT--DN 202 (393)
T ss_dssp HHHHHHHHHHTCCBCEECTTCTTCEETT--E--ET-------TS-----SSEEEEECCTTSSS---CSSSCEEEEE--SC
T ss_pred HHHHHHHHHcCCeEEEECccccCCeECC--e--ec-------CC-----CCeEEEeCCCCCcc---ccccceEEEe--CC
Confidence 99999999999999999999964 3321 1 11 00 156677999 665 4558999973 45
Q ss_pred HHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHH
Q psy13922 258 PGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREK 337 (509)
Q Consensus 258 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 337 (509)
+++++.+..........+... +.+....+. +. ....+... ....+..++. ....+++
T Consensus 203 ~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~---~~----~~~~g~~~--~~~~~~~a~~---------~~~l~~~ 259 (393)
T 1mdo_A 203 PQFADKLRSLKFHGLGVDAWD-----RQSGGRAPQ---AE----VLAPGYKY--NLPDLNAAIA---------LAQLQKL 259 (393)
T ss_dssp HHHHHHHHHHTBTTEECC----------------C---CE----ESSCCCBC--CCCHHHHHHH---------HHHHHTH
T ss_pred HHHHHHHHHHHhcCCcccchh-----hhccccccc---cc----ccccCccC--CCCHHHHHHH---------HHHHHHH
Confidence 899998876544211111110 000000000 00 00000000 0000110000 1122335
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeecc-C-----CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEec
Q psy13922 338 QSVLDSLKQRAKMVADTFNSIEGMSCNP-V-----QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVP 411 (509)
Q Consensus 338 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~-----~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 411 (509)
++..+..+++++.+.+.|.+++ +++.. + .+++++|+.++ ... .+. +..+ +...|.++||.+.+
T Consensus 260 ~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~--~~~------~~~-~~~~-l~~~l~~~gi~v~~ 328 (393)
T 1mdo_A 260 DALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVD--EAR------CGI-TRDA-LMASLKTKGIGTGL 328 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECC--HHH------HSS-CHHH-HHHHHHHTTBCCBC
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEec--ccc------ccc-CHHH-HHHHHHhCCCCccc
Confidence 5666677778888999999884 77642 2 34556776664 100 022 2334 35556678999998
Q ss_pred CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHH
Q psy13922 412 GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEK 489 (509)
Q Consensus 412 g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~ 489 (509)
|..+... ..++.. + ......|...+ .+.. ++|+++. +++++
T Consensus 329 ~~~~~~~--~~~~~~--~------------~~~~~~~~~~~-------------~~~~--------~lRi~~~~~~t~~~ 371 (393)
T 1mdo_A 329 HFRAAHT--QKYYRE--R------------FPTLTLPDTEW-------------NSER--------ICSLPLFPDMTESD 371 (393)
T ss_dssp CCCCGGG--SHHHHH--H------------STTCCCHHHHH-------------HHTT--------EEEECCCTTCCHHH
T ss_pred ccCcccc--Chhhhc--c------------CCccCChhHHH-------------HHhC--------EEEecCCCCCCHHH
Confidence 7754210 000000 0 00000000000 0112 7999998 79999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy13922 490 LKAMLEKFREFHEEFLA 506 (509)
Q Consensus 490 i~~~~~~l~~~~~~~~~ 506 (509)
++.+++.|+++++.+..
T Consensus 372 i~~~~~~l~~~~~~~~~ 388 (393)
T 1mdo_A 372 FDRVITALHQIAGQGSH 388 (393)
T ss_dssp HHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHhcCCc
Confidence 99999999998876654
No 138
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.95 E-value=8.3e-26 Score=238.09 Aligned_cols=355 Identities=17% Similarity=0.193 Sum_probs=227.4
Q ss_pred HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc----CCCCC
Q psy13922 28 DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE----DVDGK 103 (509)
Q Consensus 28 ~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~----~gd~~ 103 (509)
+.+.+++.+.+.. ... .|++..+..+++++++++++ .++|++|+|+++|+..+++++++ +||
T Consensus 55 ~~v~~a~~~~~~~---~~~-~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd-- 120 (467)
T 1ax4_A 55 NAMSDHQWAAMIT---GDE-AYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRGAENILFPVLLKYKQKEGK-- 120 (467)
T ss_dssp CCEEHHHHHHHHT---CCC-CSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHhh---ccc-ccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHHHHHHHHHHHHHhhccCCC--
Confidence 5667777666654 223 48888888999999999983 36899999999999999999998 888
Q ss_pred CCe---EEEcCCCChhHHHHHHhcCCEEEEEecCC----C----CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC-
Q psy13922 104 KPG---VLIPIPQYPLYSASLAEFNMEQIGYYLDE----S----KQWGLPISELERSITEARKHCNPRAIVIINPGNPT- 171 (509)
Q Consensus 104 ~~~---Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~----~----~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt- 171 (509)
. |+++.+.|..+...+...|.+++.++... . .++.+|++.|++.+++.. ..++++|++++|+||+
T Consensus 121 --~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-~~~~~~vi~~~~~np~g 197 (467)
T 1ax4_A 121 --AKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG-ADNIVAIVSTVTCNSAG 197 (467)
T ss_dssp --CSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC-GGGEEEEEEESSBTTTT
T ss_pred --ccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC-CCCeeEEEEeccccCCC
Confidence 7 89887777777888888999988876532 1 134689999999998631 0158999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEcccCCc-ccc---c--CCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 172 GQVLTKENIQDIIKFAHREKLFLFADEVYQD-NVY---A--EGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 172 G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~-~~~---~--~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
|.+++.+++++|+++|++||++||+|+++.. ..+ . .+....++.++.+++.. ..+++ +.|+||.+ |++
T Consensus 198 G~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~-~~s~sK~~-g~~- 271 (467)
T 1ax4_A 198 GQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYK---YADAL-TMSAKKDP-LLN- 271 (467)
T ss_dssp SBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGG---GCSEE-EEETTSTT-CCS-
T ss_pred ccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhcc---ccceE-EEeccccC-CCC-
Confidence 8999999999999999999999999998653 010 0 00011233333221110 11244 46999998 655
Q ss_pred CeeEEEeeecCCH-HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCC
Q psy13922 246 LRGGYSEVINLDP-GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQ 324 (509)
Q Consensus 246 lr~G~v~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 324 (509)
+ .||++. .++ ++++.+......+.+....+.... . ...++...+
T Consensus 272 ~-Gg~~~~--~d~~~l~~~~~~~~~~~~~~~~~~~~~~------------~----------------~~~a~~~~l---- 316 (467)
T 1ax4_A 272 I-GGLVAI--RDNEEIFTLARQRCVPMEGFVTYGGLAG------------R----------------DMAAMVQGL---- 316 (467)
T ss_dssp S-CEEEEE--SSCHHHHHHHHHHHHHHTCSTTTTTCCH------------H----------------HHHHHHHHH----
T ss_pred c-ceEEEe--CCHHHHHHHHHhhccccccccccCCccc------------h----------------HHHHHHHHH----
Confidence 1 266652 336 888887665432111111100000 0 111111111
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCC-----CCHHHHHHHhhcCCCCcHHHHH
Q psy13922 325 PGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMK-----LPAKAIAKAKAEGKCPSVLYAF 399 (509)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~ 399 (509)
....+ +.......++++.+.+.|++ +++.+..+.+++++|+++. ++. .+. +...++.
T Consensus 317 ------~~~~~--~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~l~~ 378 (467)
T 1ax4_A 317 ------EEGTE--EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQIPG--------DQF-PAQAVIN 378 (467)
T ss_dssp ------HHTTC--HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTTSCG--------GGC-HHHHHHH
T ss_pred ------HHhhh--hhHHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhcccccc--------CCC-CHHHHHH
Confidence 10100 11222233566778888877 4888777888999998732 111 011 2345555
Q ss_pred HHHhhcCeEEec-CCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCcee
Q psy13922 400 ELLERTGICIVP-GAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYH 478 (509)
Q Consensus 400 ~ll~~~gI~v~p-g~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (509)
.++.++||.+.| |..|.... +..+.+...+..+
T Consensus 379 ~L~~~~gv~v~~~g~~~~~~~----------------------------------------------~~~g~~~~~~~~~ 412 (467)
T 1ax4_A 379 ALYLESGVRAVEIGSFLLGRD----------------------------------------------PATGEQKHADMEF 412 (467)
T ss_dssp HHHHHHCEECEEESHHHHCBC----------------------------------------------TTTCSBCCCSCCE
T ss_pred HHHHhcCceeeecCccccccc----------------------------------------------cccccccccccce
Confidence 665889999999 55321100 0000000111239
Q ss_pred EEEEee---cChHHHHHHHHHHHHHHHHH
Q psy13922 479 FRTTIL---PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 479 ~Rls~~---~~~~~i~~~~~~l~~~~~~~ 504 (509)
+||++. .+.+++++++++|++++++.
T Consensus 413 iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 413 MRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp EEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred EEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 999998 68999999999999998764
No 139
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.95 E-value=1e-26 Score=239.64 Aligned_cols=312 Identities=12% Similarity=0.097 Sum_probs=210.4
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh--cCCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI--EDVDGK 103 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--~~gd~~ 103 (509)
.|+.+++++.+++...... ...| +.....++++.+++++ + +.+++|++|+|+++++..+++++. .+++
T Consensus 62 ~~~~v~~a~~~~~~~~~~~-~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~~~gg~~a~~~al~~~~~~~~~~-- 131 (395)
T 1vef_A 62 GNPEVVEAVKRQAETLMAM-PQTL-PTPMRGEFYRTLTAIL----P--PELNRVFPVNSGTEANEAALKFARAHTGRK-- 131 (395)
T ss_dssp TCHHHHHHHHHHHHHCCCC-CTTS-CCHHHHHHHHHHHHTS----C--TTEEEEEEESSHHHHHHHHHHHHHHHHSCC--
T ss_pred CCHHHHHHHHHHHHhCCCC-cccc-CCHHHHHHHHHHHHhc----C--CCcCEEEEcCcHHHHHHHHHHHHHHHhCCC--
Confidence 5789999999999863211 1224 3444466666666655 4 357899999999999999998874 5666
Q ss_pred CCeEEEcCCCChhH-HHHHHhcCCE------------EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 104 KPGVLIPIPQYPLY-SASLAEFNME------------QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~-~~~~~~~g~~------------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
.|+++.|+|++. ...+...|.+ +..++ ..|++.|++.+++ ++++|+++.++||
T Consensus 132 --~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~-------~~d~~~l~~~i~~-----~~~~v~~~~~~~~ 197 (395)
T 1vef_A 132 --KFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIP-------YNDVEALKRAVDE-----ETAAVILEPVQGE 197 (395)
T ss_dssp --EEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEEC-------TTCHHHHHHHCCT-----TEEEEEECSEETT
T ss_pred --eEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeC-------CCcHHHHHHHhcc-----CEEEEEEeCccCC
Confidence 899999999764 4456666765 22222 2489999998875 7888888777899
Q ss_pred CCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeE
Q psy13922 171 TGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGG 249 (509)
Q Consensus 171 tG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G 249 (509)
||.++ +++++++|+++|++||+++|+||+|.++.+.+. ..++... +.. .+++ ||||.+ | +|+|+|
T Consensus 198 tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~--~~~~~~~--~~~-----~d~~---s~sK~~-~-~g~~~G 263 (395)
T 1vef_A 198 GGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGK--RFAFEHF--GIV-----PDIL---TLAKAL-G-GGVPLG 263 (395)
T ss_dssp TTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHHH--TCC-----CSEE---EECGGG-G-TTSSCE
T ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCc--hhHhhhc--CCC-----CCEE---EEcccc-c-CCCceE
Confidence 99864 788999999999999999999999997654431 2122211 111 1233 889999 5 599999
Q ss_pred EEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC
Q psy13922 250 YSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 250 ~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 328 (509)
|++ .++++++.+..... ...+.+.+ .+.++..+++
T Consensus 264 ~~~---~~~~~~~~l~~~~~~~~~~~~~~----------------------------------~~~a~~~al~------- 299 (395)
T 1vef_A 264 VAV---MREEVARSMPKGGHGTTFGGNPL----------------------------------AMAAGVAAIR------- 299 (395)
T ss_dssp EEE---EEHHHHHTSCTTSSCCSSTTCHH----------------------------------HHHHHHHHHH-------
T ss_pred EEE---ehHHHHhhhccCCcCCCcCCCHH----------------------------------HHHHHHHHHH-------
Confidence 998 57777776644211 12233333 3333322221
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCee--ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcC
Q psy13922 329 SYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSC--NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTG 406 (509)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~g 406 (509)
.... +.+.+.++++++.+.+.|++++. .+ ..+..+.++|++++. +...+...+++++|
T Consensus 300 ----~~~~-~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~~~~~~~~~--------------~~~~l~~~l~~~~g 359 (395)
T 1vef_A 300 ----YLER-TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGLMVGLELKE--------------KAAPYIARLEKEHR 359 (395)
T ss_dssp ----HHHH-HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETTEEEEEESS--------------CSHHHHHHHHHHHC
T ss_pred ----HHHh-CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEEEEEEEEcC--------------hHHHHHHHHHHHCC
Confidence 1111 34567788888899999988732 21 122345677766641 14444555554789
Q ss_pred eEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--
Q psy13922 407 ICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-- 484 (509)
Q Consensus 407 I~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-- 484 (509)
|.+.|+. .+ ++|+++.
T Consensus 360 i~v~~~~----------------------------------------------------~~----------~iRi~~~~~ 377 (395)
T 1vef_A 360 VLALQAG----------------------------------------------------PT----------VIRFLPPLV 377 (395)
T ss_dssp EECEESS----------------------------------------------------TT----------EEEECCCTT
T ss_pred eEEecCC----------------------------------------------------CC----------EEEEeCCCC
Confidence 9999742 22 8999865
Q ss_pred cChHHHHHHHHHHHHHH
Q psy13922 485 PQPEKLKAMLEKFREFH 501 (509)
Q Consensus 485 ~~~~~i~~~~~~l~~~~ 501 (509)
.+++++++++++|++++
T Consensus 378 ~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 378 IEKEDLERVVEAVRAVL 394 (395)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 79999999999998875
No 140
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.95 E-value=1.3e-26 Score=241.27 Aligned_cols=323 Identities=12% Similarity=0.110 Sum_probs=206.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-CCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-DVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~~~~ 105 (509)
|+.+++++.+++..........|+ .+++.++++.+.+.+|++. +++|++|+|+++++..+++.+.. .++
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~~~~-----~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea~~~ai~~~~~~~~~---- 130 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLAHAAANDFY-----NIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEAIEASIKVVKNTGRK---- 130 (419)
T ss_dssp CHHHHHHHHHHHTTSCCCSCSCSC-----CHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHTTSCC----
T ss_pred CHHHHHHHHHHHhhCccccccccC-----CHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHHHHHHHHHHHHhhCC----
Confidence 799999999998762110112233 2334444444444446443 78999999999999999998764 366
Q ss_pred eEEEcCCCChhHHHHHHh-c-------------CCEEEEEecCCC--CCCC------------CCHHHHH-HHHHhhhcc
Q psy13922 106 GVLIPIPQYPLYSASLAE-F-------------NMEQIGYYLDES--KQWG------------LPISELE-RSITEARKH 156 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~-~-------------g~~~~~v~~~~~--~~~~------------~d~~~L~-~~i~~~~~~ 156 (509)
.|+++.|+|+++...... . ...++.+|.+.. ..|+ +|++.|+ +.+++....
T Consensus 131 ~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~ 210 (419)
T 2eo5_A 131 YIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPP 210 (419)
T ss_dssp EEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCG
T ss_pred cEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCC
Confidence 999999999875543331 1 125667766432 1122 3688998 888741000
Q ss_pred CCceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEe
Q psy13922 157 CNPRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMS 235 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 235 (509)
.++++|+++..|||||. ..+++++++|.++|++||+++|+||+|.+|.+.+. ..++... +.. .+++ |
T Consensus 211 ~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~--~~~~~~~--~~~-----~d~~---t 278 (419)
T 2eo5_A 211 EEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK--LFAIENF--NTV-----PDVI---T 278 (419)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGG--TCC-----CSEE---E
T ss_pred CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc--hhhHHhc--CCC-----CCEE---E
Confidence 14555555434567896 67889999999999999999999999998876542 1111111 111 1233 8
Q ss_pred cccccCCCCC-CeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccc
Q psy13922 236 CSKGYMGECG-LRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQT 314 (509)
Q Consensus 236 ~SK~~~G~~G-lr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (509)
|||.+ | +| +|+||++ ++++++ .+........+.+.+ +++
T Consensus 279 ~sK~~-~-~G~~riG~~~---~~~~~~-~~~~~~~~t~~~n~~----------------------------------~~~ 318 (419)
T 2eo5_A 279 LAKAL-G-GGIMPIGATI---FRKDLD-FKPGMHSNTFGGNAL----------------------------------ACA 318 (419)
T ss_dssp ECGGG-G-TTTSCCEEEE---EEGGGC-CC------CCCCCHH----------------------------------HHH
T ss_pred ecccc-c-CCccceEEEE---EchHhh-cCCcccCCCCCCCHH----------------------------------HHH
Confidence 89999 5 59 9999998 577776 552122234455666 444
Q ss_pred hhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCc
Q psy13922 315 VMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPS 394 (509)
Q Consensus 315 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 394 (509)
++..+++ . .+++++.++++++++.+.|+++ +...++.| .++|+++. +... ..
T Consensus 319 aa~aal~-----------~---~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~g-~~~~i~~~-~~~~----------~~ 370 (419)
T 2eo5_A 319 IGSKVID-----------I---VKDLLPHVNEIGKIFAEELQGL--ADDVRGIG-LAWGLEYN-EKKV----------RD 370 (419)
T ss_dssp HHHHHHH-----------H---HHHHHHHHHHHHHHHHHHHTTS--SSEEEEET-TEEEEECS-CHHH----------HH
T ss_pred HHHHHHH-----------H---HHHHHHHHHHHHHHHHHHHHHh--hhheEeee-EEEEEEEe-cCcc----------HH
Confidence 4444322 1 2237788889999999999876 33344554 45565553 2100 12
Q ss_pred HHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCC
Q psy13922 395 VLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVP 474 (509)
Q Consensus 395 ~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (509)
. +...+ .++||.++|+. .+
T Consensus 371 ~-~~~~l-~~~Gv~v~~~~----------------------------------------------------~~------- 389 (419)
T 2eo5_A 371 R-IIGES-FKRGLLLLPAG----------------------------------------------------RS------- 389 (419)
T ss_dssp H-HHHHH-HHTTEECEEET----------------------------------------------------TT-------
T ss_pred H-HHHHH-HHCCCEEecCC----------------------------------------------------CC-------
Confidence 3 44444 47899999743 12
Q ss_pred CceeEEEEee--cChHHHHHHHHHHHHHHHH
Q psy13922 475 GTYHFRTTIL--PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 475 ~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~ 503 (509)
++|+++. .+++++++++++|++++++
T Consensus 390 ---~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 390 ---AIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp ---EEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---EEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 8999654 8999999999999998865
No 141
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.94 E-value=4.6e-26 Score=239.99 Aligned_cols=345 Identities=14% Similarity=0.073 Sum_probs=215.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
||.|++++.+++.+. .+. |....+..+.++++++++.+.++ ...++|++|+|+++|+..+++.+++. |.+
T Consensus 68 ~p~v~~A~~~~~~~~---~~~-~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~ 141 (459)
T 4a6r_A 68 RKDFAEAARRQMEEL---PFY-NTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKP 141 (459)
T ss_dssp CHHHHHHHHHHHHHC---SCC-CTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhc---ccc-ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 789999999999872 211 33333445677777777776655 45679999999999999999999761 111
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCC--C-CCCCCC--------HHHHHHHHHhhhccCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDE--S-KQWGLP--------ISELERSITEARKHCN 158 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~--~-~~~~~d--------~~~L~~~i~~~~~~~~ 158 (509)
+++.|++..|+|+++...+...+. .+..++... . +.+ .| ++.|++.+++... .+
T Consensus 142 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~-~~ 219 (459)
T 4a6r_A 142 EKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGA-DK 219 (459)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG-GG
T ss_pred CCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCC-CC
Confidence 234999999999988766554422 222333211 0 112 45 7888888874211 14
Q ss_pred ceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 159 PRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 159 ~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
+++|+++.++|++|. .++++++++|.++|++||+++|+||+|.+|...+. ...... .++.+ ++ .+||
T Consensus 220 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~--~~~~~~--~~~~p-----di---~t~s 287 (459)
T 4a6r_A 220 VAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGE--WFGHQH--FGFQP-----DL---FTAA 287 (459)
T ss_dssp EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSHHHH--HTCCC-----SE---EEEC
T ss_pred EEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc--cchHhh--cCCCC-----Ce---eehh
Confidence 566666655666666 56999999999999999999999999999876642 222222 12221 13 3679
Q ss_pred cccCCCCCCeeEEEeeecCCHHHHHHHHH---hhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCccccc
Q psy13922 238 KGYMGECGLRGGYSEVINLDPGVKAMLHK---SIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQ 313 (509)
Q Consensus 238 K~~~G~~Glr~G~v~~~~~~~~~~~~l~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (509)
|.+ |.+|+|+||++ .++++++.+.. ... .+++.+.+++.+ +.
T Consensus 288 K~l-~gg~~~lg~v~---~~~~i~~~~~~~~~~~~~~t~~~~~~~~aa------------------------------a~ 333 (459)
T 4a6r_A 288 KGL-SSGYLPIGAVF---VGKRVAEGLIAGGDFNHGFTYSGHPVCAAV------------------------------AH 333 (459)
T ss_dssp GGG-GTTSSCCEEEE---ECHHHHHHHHHHCTTHHHHHHCSCHHHHHH------------------------------HH
T ss_pred hhh-cCCCCCcccee---eCHHHHHHhhcCCCcccCCCCCCCHHHHHH------------------------------HH
Confidence 999 43449999998 79999999872 222 334555552222 22
Q ss_pred chhhcccCCCCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCC
Q psy13922 314 TVMDCVVNPPQPGEPSYEQFSREKQSVL-DSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKC 392 (509)
Q Consensus 314 ~al~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 392 (509)
+++..+.+ + +..++++ +.....++.+.+.|.+.|.+..+.+.|.++. +++..... .+....
T Consensus 334 aal~~~~~---------~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~-~~~~~~~~-----~~~~~~ 395 (459)
T 4a6r_A 334 ANVAALRD---------E---GIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQA-FTLVKNKA-----KRELFP 395 (459)
T ss_dssp HHHHHHHH---------T---CHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEEE-EEECSBTT-----TTBCCS
T ss_pred HHHHHHhc---------c---hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEE-EEEecCcc-----cccccc
Confidence 23222111 1 1133444 4444455555555666665666666666544 34431100 000000
Q ss_pred C----cHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCC
Q psy13922 393 P----SVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGA 468 (509)
Q Consensus 393 ~----~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (509)
+ ...+ ...|.++||.++|+. .
T Consensus 396 ~~~~~~~~~-~~~l~~~Gv~v~~~g---~--------------------------------------------------- 420 (459)
T 4a6r_A 396 DFGEIGTLC-RDIFFRNNLIMRACG---D--------------------------------------------------- 420 (459)
T ss_dssp STTHHHHHH-HHHHHHTTEECEEET---T---------------------------------------------------
T ss_pred chHHHHHHH-HHHHHHCCeEEecCC---C---------------------------------------------------
Confidence 0 2233 344556799998732 1
Q ss_pred CCCCCCCceeEEEE--eecChHHHHHHHHHHHHHHHHHHhh
Q psy13922 469 GFGQVPGTYHFRTT--ILPQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 469 ~~~~~~~~~~~Rls--~~~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
++|++ +..+++++++++++|++++++..++
T Consensus 421 ---------~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 452 (459)
T 4a6r_A 421 ---------HIVSAPPLVMTRAEVDEMLAVAERCLEEFEQT 452 (459)
T ss_dssp ---------EEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 89998 5589999999999999999887654
No 142
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.94 E-value=9.4e-26 Score=234.45 Aligned_cols=208 Identities=16% Similarity=0.267 Sum_probs=158.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-h
Q psy13922 19 QLFDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-I 97 (509)
Q Consensus 19 ~~~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~ 97 (509)
+..+.|.+|+.+++++.+.+++ ..+.+|++..|..++++++++.+.+.+|.+ ++++++++++++..+++++ .
T Consensus 7 g~p~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~g~~~l~~~l~~~la~~~g~~----~~i~~~~gt~al~~~~~~~~~ 79 (418)
T 2c81_A 7 HWPEWPQHSDRTRRKIEEVFQS---NRWAISGYWTGEESMERKFAKAFADFNGVP----YCVPTTSGSTALMLALEALGI 79 (418)
T ss_dssp -CCCSSCCCHHHHHHHHHHHHH---TCCSTTSBCCSSCCHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHhc---CCccccCcccCCHHHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCC
Confidence 3445677899999999999987 344457777774444555555544444532 5677777889999999999 7
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
++|| .|+++.|+|.++...++..|++++.++.+++ ++.+|++.|++.+++ ++++|+++ ||||...+
T Consensus 80 ~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~-----~~~~v~~~---~~~G~~~~- 145 (418)
T 2c81_A 80 GEGD----EVIVPSLTWIATATAVLNVNALPVFVDVEAD-TYCIDPQLIKSAITD-----KTKAIIPV---HLFGSMAN- 145 (418)
T ss_dssp CTTC----EEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHGGGCCT-----TEEEECCB---CCTTCCCC-
T ss_pred CCcC----EEEECCCccHhHHHHHHHcCCEEEEEecCCC-CCCcCHHHHHHhhCC-----CCeEEEEe---CCcCCccc-
Confidence 8888 9999999999999999999999999998753 578999999998876 68888854 58998754
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCccc-ccCCCccccHHHHHHHhCCCCCCceeEEEEec--ccccCCCCCCeeEEEeee
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNV-YAEGSKFYSFKKVLVEMGEPYKSMELASFMSC--SKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~G~~Glr~G~v~~~ 254 (509)
+++|.++|+++|++||+|++|..+. +++. ...+ . . .+.+.|| ||.+ |. | |+||++.
T Consensus 146 --~~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~-------~------~-~~~~~s~s~~K~~-~~-g-~~g~~~~- 204 (418)
T 2c81_A 146 --MDEINEIAQEHNLFVIEDCAQSHGSVWNNQ-RAGT-------I------G-DIGAFSCQQGKVL-TA-G-EGGIIVT- 204 (418)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTCTTCEETTE-ETTS-------S------S-SEEEEECCTTSSS-CS-S-SCEEEEE-
T ss_pred --HHHHHHHHHHCCCEEEEECcccccCccCCE-eccc-------c------c-ceEEEeccCCccc-CC-C-CeEEEEE-
Confidence 8999999999999999999999876 4321 1110 0 0 2445677 9999 65 8 9999972
Q ss_pred cCCHHHHHHHHHhhh
Q psy13922 255 NLDPGVKAMLHKSIS 269 (509)
Q Consensus 255 ~~~~~~~~~l~~~~~ 269 (509)
.++++++.+.....
T Consensus 205 -~~~~l~~~~~~~~~ 218 (418)
T 2c81_A 205 -KNPRLFELIQQLRA 218 (418)
T ss_dssp -SCHHHHHHHHHHHB
T ss_pred -CCHHHHHHHHHHHH
Confidence 46889888876554
No 143
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.94 E-value=1.3e-25 Score=232.16 Aligned_cols=212 Identities=17% Similarity=0.184 Sum_probs=154.4
Q ss_pred CCCCCCCC--CHHHHHHHHHHHhccc-CCCcccCC--CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHH
Q psy13922 19 QLFDDPRF--PDDVKQRAQAVLDGCR-GQSVGSYT--DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVL 93 (509)
Q Consensus 19 ~~~~~~~~--p~~v~~a~~~~l~~~~-~~~~~~Y~--~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~ 93 (509)
..++.|++ |+.+.+++.+++.... ......|+ +..+..++++.+++++ |. +++++++++++++..++
T Consensus 25 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~----~~~i~~~sG~~a~~~~l 96 (398)
T 2rfv_A 25 GALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLE----RG----EAGLATASGISAITTTL 96 (398)
T ss_dssp CCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHH----TC----SEEEEESSHHHHHHHHH
T ss_pred CCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHh----CC----CcEEEECCHHHHHHHHH
Confidence 34577776 3444455444444100 01111243 4556677888888877 42 25666666679999999
Q ss_pred HHhhcCCCCCCCeEEEcCCCChhHHHHH----HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 94 KLLIEDVDGKKPGVLIPIPQYPLYSASL----AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 94 ~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
+++.++|| +|+++.|+|.++...+ +..|.+++.++.+ |++.+++.+++ ++++|++++|+|
T Consensus 97 ~~~~~~gd----~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~-----~~~~v~~~~~~n 160 (398)
T 2rfv_A 97 LTLCQQGD----HIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRP-----ETKVVYIETPAN 160 (398)
T ss_dssp HHHCCTTC----EEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCT-----TEEEEEEESSBT
T ss_pred HHHhCCCC----EEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCC-----CCeEEEEECCCC
Confidence 99998888 9999999999988776 7789999998864 78999998876 799999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-
Q psy13922 170 PTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG- 248 (509)
Q Consensus 170 PtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~- 248 (509)
|||.+++ +++|+++|+++|+++|+||+|..+.+.. +. . .+ ..+++.|+||.+ |.+|+|+
T Consensus 161 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~-----~~-~----~~------~di~~~s~sK~~-~~~g~~~~ 220 (398)
T 2rfv_A 161 PTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ-----PL-Q----LG------ADIVVHSVTKYI-NGHGDVIG 220 (398)
T ss_dssp TTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-----GG-G----GT------CSEEEEETTTTT-TCSSCCCC
T ss_pred CCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-----ch-h----hC------CcEEEEeCcccc-cCCCCceE
Confidence 9999997 9999999999999999999999765531 11 1 11 256678999999 6799998
Q ss_pred EEEeeecCCHHHHH-HHHHhhhcc--cCcchh
Q psy13922 249 GYSEVINLDPGVKA-MLHKSISAM--LCPTVL 277 (509)
Q Consensus 249 G~v~~~~~~~~~~~-~l~~~~~~~--~~~~~~ 277 (509)
||++ .++++++ .+......+ ...+.+
T Consensus 221 G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (398)
T 2rfv_A 221 GIIV---GKQEFIDQARFVGLKDITGGCMSPF 249 (398)
T ss_dssp EEEE---ECHHHHHHHHHTHHHHTTCCCCCHH
T ss_pred EEEE---ECHHHHHHHHHHHHHhCCCCCCCHH
Confidence 9998 6788776 565544422 344444
No 144
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.94 E-value=3.5e-26 Score=240.60 Aligned_cols=220 Identities=13% Similarity=0.073 Sum_probs=147.4
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-CCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-DVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~~~~ 105 (509)
|+.|++++.+++.+. .+|....+..+.+.++++.+.+.++.. ..++|++|+|+++|+..+++.++. ++ ++
T Consensus 82 ~p~v~~A~~~~~~~~-----~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~~~alk~a~~~~g---~~ 152 (453)
T 4ffc_A 82 HPAVAAAIADQATHF-----THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEAVENAIKVARLATG---RP 152 (453)
T ss_dssp CHHHHHHHHHHHHHC-----SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHHHHHHHHHHHHHHC---CC
T ss_pred CHHHHHHHHHHHHhc-----cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHHHHHHHHHHHHhcC---CC
Confidence 799999999999872 124443444566667777776665422 257999999999999999988764 23 23
Q ss_pred eEEEcCCCChhHHHHHHhcCC--------------EEEEEecCC--CCCCCCC--------HHHHHHHHHhhhccCCceE
Q psy13922 106 GVLIPIPQYPLYSASLAEFNM--------------EQIGYYLDE--SKQWGLP--------ISELERSITEARKHCNPRA 161 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~--------------~~~~v~~~~--~~~~~~d--------~~~L~~~i~~~~~~~~~~~ 161 (509)
.|++..++|+++...+...+. .+..++... ...++.+ ++.|++.+.. +..+
T Consensus 153 ~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~-----~~~a 227 (453)
T 4ffc_A 153 AVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGA-----QSLA 227 (453)
T ss_dssp EEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCG-----GGEE
T ss_pred EEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCC-----CCEE
Confidence 899999999987766554422 344444431 1122333 2333333322 3556
Q ss_pred EEEeCCCCCCC--CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 162 IVIINPGNPTG--QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 162 ivi~~p~NPtG--~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
++++.|+|++| ...+++++++|.++|++||+++|+||+|.+|...+. ....... ++.+ + +.+|||.
T Consensus 228 avi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~--~~a~~~~--~~~p-----d---i~t~sK~ 295 (453)
T 4ffc_A 228 AIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA--WFASEHE--GIVP-----D---IVTMAKG 295 (453)
T ss_dssp EEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHHH--TCCC-----S---EEEECGG
T ss_pred EEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc--cchhhhc--CCCc-----c---hHhhhhh
Confidence 66667777776 456888999999999999999999999999876542 2232221 1111 1 4478999
Q ss_pred cCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchh
Q psy13922 240 YMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
+ | .|+|+||++ +++++++.+..... .+++.+.+
T Consensus 296 ~-~-~G~~~G~~~---~~~~i~~~~~~~~~~~t~~~~~~ 329 (453)
T 4ffc_A 296 I-A-GGMPLSAVT---GRAELMDAVYAGGLGGTYGGNPV 329 (453)
T ss_dssp G-G-TTSSCEEEE---EEHHHHTTSCTTSSCCSSSSCHH
T ss_pred h-c-CCcCeEEEE---ECHHHHhhhcccCcCCCCCcCHH
Confidence 9 5 599999998 78999888765433 34455666
No 145
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.94 E-value=3.3e-26 Score=238.61 Aligned_cols=345 Identities=12% Similarity=0.084 Sum_probs=208.6
Q ss_pred CCCCHHHHHHHHHHHhcccCCCcccCCCC----cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh--
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQSVGSYTDS----PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-- 97 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~----~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-- 97 (509)
+..|+.+++++.+.+..........|... ....++|+.+++++ | +++++|++|+|+++++..+++++.
T Consensus 28 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a~~~~~~~~~~~ 101 (432)
T 3a9z_A 28 TPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMI----G--GKPQDIIFTSGGTESNNLVIHSTVRC 101 (432)
T ss_dssp CCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHH----T--CCGGGEEEESCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHc----C--CCcCeEEEeCChHHHHHHHHHHHHhh
Confidence 35689999999998876211111223211 12457888888887 4 467899999999999999999986
Q ss_pred ------cCCCCCCCeEEEcCCCChhH-----------------HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 98 ------EDVDGKKPGVLIPIPQYPLY-----------------SASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 98 ------~~gd~~~~~Vlv~~p~y~~~-----------------~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
++|| +|+++.|+|..+ ...++..|.+++.++.+++ ++.+|++.|++.+++
T Consensus 102 ~~~~~~~~gd----~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~i~~-- 174 (432)
T 3a9z_A 102 FHEQQTLQGR----TVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQVEVEDILAAVRP-- 174 (432)
T ss_dssp HHHHHHHC----------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSSCCHHHHHHTCCT--
T ss_pred hhhccccCCc----cccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCCcCHHHHHHhccC--
Confidence 4787 999999999765 3444557999999998752 347899999998876
Q ss_pred ccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC----------cEEEEcccCCcccccCCCccccHHHHHHHhCCC
Q psy13922 155 KHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREK----------LFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEP 224 (509)
Q Consensus 155 ~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~----------i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 224 (509)
++++|++++|+||||.+++ +++|.++|+++| +++|+|++|..+. ...++... +
T Consensus 175 ---~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~-----~~~~~~~~----~-- 237 (432)
T 3a9z_A 175 ---TTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK-----RRVDVEDL----G-- 237 (432)
T ss_dssp ---TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT-----SCCCHHHH----C--
T ss_pred ---CceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC-----cccChhhc----C--
Confidence 7999999999999999999 567888999999 9999999997642 12233322 1
Q ss_pred CCCceeEEEEecccccCCCCCCeeEEEeeecCCHHH-HHHHHHhhh--------cccCcchhhhhccccccCCCCCchhH
Q psy13922 225 YKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGV-KAMLHKSIS--------AMLCPTVLALVSLPQLFDDPRFPDDV 295 (509)
Q Consensus 225 ~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~-~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (509)
.+++ +.|+||.+ | .|+||++ .++++ ...+..... ..+.++..
T Consensus 238 ---~d~~-~~s~~K~~-g---~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 288 (432)
T 3a9z_A 238 ---VDFL-TIVGHKFY-G---PRIGALY---VRGVGKLTPLYPMLFGGGQERNFRPGTENTP------------------ 288 (432)
T ss_dssp ---CSEE-EEEGGGTT-C---CSCEEEE---ETTBTTTBCCCCSCCSSCGGGGTSCSCCCHH------------------
T ss_pred ---CCEE-EEehhHhc-C---CcceEEE---EccccccCCcCceeecCCccccccCCCcCHH------------------
Confidence 1254 67999987 5 3599998 34443 221211000 01112222
Q ss_pred HHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec--cC-----Cc
Q psy13922 296 KQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN--PV-----QG 368 (509)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~-----~~ 368 (509)
++.++..+++ ...++++++++.++++++++.+.|++++|+.+. .+ ..
T Consensus 289 ----------------~~~a~~aal~----------~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 342 (432)
T 3a9z_A 289 ----------------MIAGLGKAAD----------LVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERL 342 (432)
T ss_dssp ----------------HHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBC
T ss_pred ----------------HHHHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCC
Confidence 3333333322 222347888899999999999999886565432 22 12
Q ss_pred eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCC
Q psy13922 369 AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCP 448 (509)
Q Consensus 369 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 448 (509)
+..+++.+.- .+. +...+ ...+ .+|.+.+|..|.... +.
T Consensus 343 ~~~~~~~~~~----------~~~-~~~~~-~~~l--~~i~~~~G~~~~~~~---------------------------~~ 381 (432)
T 3a9z_A 343 PNTCNFSIQG----------SQL-RGYMV-LAQC--QTLLASVGASCHSDH---------------------------ED 381 (432)
T ss_dssp TTEEEEEECS----------TTC-CHHHH-HHHC--SSEECBSSCGGGGGG---------------------------TT
T ss_pred CCEEEEEeCC----------CCC-cHHHH-HHHh--cCeEEeccccccCCC---------------------------CC
Confidence 2233333320 011 12222 2222 388888887664410 00
Q ss_pred chhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHHHHHH
Q psy13922 449 SVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~~~ 505 (509)
.....+...|+....+.+ ++|+++. ++++++++++++|++++++++
T Consensus 382 ---~~~~~l~~~g~~~~~~~~--------~iRis~~~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 382 ---RPSPVLLSCGIPVDVARN--------AVRLSVGRSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp ---SCCHHHHHTTCCHHHHTT--------EEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CccHHHHhcCCCccccCc--------eEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 000111111111001112 8999999 489999999999999987764
No 146
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.94 E-value=7.1e-26 Score=237.97 Aligned_cols=212 Identities=10% Similarity=0.093 Sum_probs=142.7
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
||.|++++.+++.+... . ...+..+.+.++++++.+.++. ..+ |++|+|+++|+..+++.++.. |.+
T Consensus 67 ~p~v~~A~~~~~~~~~~-~-----~~~~~~~~~~~la~~l~~~~~~--~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~ 137 (452)
T 3n5m_A 67 RKELAEAAYKQLQTLSY-F-----PMSQSHEPAIKLAEKLNEWLGG--EYV-IFFSNSGSEANETAFKIARQYYAQKGEP 137 (452)
T ss_dssp CHHHHHHHHHHHTTCCC-C-----CTTSEEHHHHHHHHHHHHHHTS--CEE-EEEESSHHHHHHHHHHHHHHHHHTTTCT
T ss_pred CHHHHHHHHHHHHhcCC-c-----ccccCCHHHHHHHHHHHHhCCC--Cce-EEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 78999999999987221 1 1123344555666665555553 334 999999999999999998721 111
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCCCCCCCC-C---------HHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDESKQWGL-P---------ISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~-d---------~~~L~~~i~~~~~~~~~ 159 (509)
+++.|++..|+|+++.......+. .+..++......+.. | ++.|++.+++... .++
T Consensus 138 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~-~~~ 216 (452)
T 3n5m_A 138 HRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELS-ETI 216 (452)
T ss_dssp TCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCG-GGE
T ss_pred CCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCC-CCE
Confidence 234999999999987765554432 133333211111111 2 8999999982111 157
Q ss_pred eEEEEeCC-CCCCCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc
Q psy13922 160 RAIVIINP-GNPTGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS 237 (509)
Q Consensus 160 ~~ivi~~p-~NPtG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 237 (509)
++|+++.+ +| ||.++ +++++++|.++|++||+++|+||+|.+|...+. ...... .++.+ + +.+||
T Consensus 217 ~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~--~~~~~~--~~~~~-----d---i~t~s 283 (452)
T 3n5m_A 217 AAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGK--AFGFMN--YDVKP-----D---IITMA 283 (452)
T ss_dssp EEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGG--TTCCC-----S---EEEEC
T ss_pred EEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccc--cchhhh--cCCCC-----C---EEeec
Confidence 78888777 89 99765 888899999999999999999999999876542 211111 11111 1 33789
Q ss_pred cccCCCCC-CeeEEEeeecCCHHHHHHHHH
Q psy13922 238 KGYMGECG-LRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 238 K~~~G~~G-lr~G~v~~~~~~~~~~~~l~~ 266 (509)
|.+ | .| +|+||++ +++++++.+.+
T Consensus 284 K~l-~-~G~~~ig~~~---~~~~i~~~~~~ 308 (452)
T 3n5m_A 284 KGI-T-SAYLPLSATA---VKREIYEAFKG 308 (452)
T ss_dssp GGG-G-TTSSCCEEEE---EEHHHHGGGCS
T ss_pred ccc-c-CCCcceEEEE---ECHHHHHHHhh
Confidence 999 5 59 9999998 79999988843
No 147
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.94 E-value=2.8e-26 Score=238.94 Aligned_cols=317 Identities=10% Similarity=0.093 Sum_probs=207.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-------C
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-------D 99 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------~ 99 (509)
|+.+++++.+++++..... ..|. .++++++++.+.+.+| .++|++|+|+++|+..+++.++. +
T Consensus 75 ~p~v~~ai~~~~~~~~~~~-~~~~-----~~~~~~l~~~la~~~g----~~~v~~~~ggteA~~~al~~~~~~~~~~~~~ 144 (420)
T 2pb2_A 75 HPALVEALKSQGETLWHTS-NVFT-----NEPALRLGRKLIDATF----AERVLFMNSGTEANETAFKLARHYACVRHSP 144 (420)
T ss_dssp CHHHHHHHHHHHTTCCCCC-TTSC-----CHHHHHHHHHHHHHSS----CSEEEEESSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CHHHHHHHHHHHHhccccc-CccC-----CHHHHHHHHHHHhhCC----CCeEEEeCCHHHHHHHHHHHHHHHhhhccCC
Confidence 7899999999988732111 1132 3345555555544444 57999999999999999999875 4
Q ss_pred CCCCCCeEEEcCCCChhHHHH-HHhcCCE------------EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeC
Q psy13922 100 VDGKKPGVLIPIPQYPLYSAS-LAEFNME------------QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN 166 (509)
Q Consensus 100 gd~~~~~Vlv~~p~y~~~~~~-~~~~g~~------------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~ 166 (509)
|+ +.|+++.|+|+++... +...|.+ +..++. .|++.|++.+++ ++++|++++
T Consensus 145 g~---~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~-----~~~~vi~~p 209 (420)
T 2pb2_A 145 FK---TKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDD-----HTCAVVVEP 209 (420)
T ss_dssp TC---CEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCT-----TEEEEEECS
T ss_pred CC---CEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhcc-----CceEEEEeC
Confidence 42 3899999999887544 3444543 444442 279999998876 799999988
Q ss_pred CCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 167 PGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 167 p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
++|++|. +++.+++++|.++|++||+++|+||+|.+|.+.+. ..++... +.. .+++ ||||.+ | +|
T Consensus 210 ~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~--~~~~~~~--~~~-----~dii---t~sK~l-~-~G 275 (420)
T 2pb2_A 210 IQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGD--LFAYMHY--GVT-----PDIL---TSAKAL-G-GG 275 (420)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSHHHHH--TCC-----CSEE---EECGGG-G-TT
T ss_pred CcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCc--HHHHHhc--CCC-----CCeE---Eecccc-c-CC
Confidence 8998884 69999999999999999999999999988766542 2222211 111 1244 789999 6 89
Q ss_pred CeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCC
Q psy13922 246 LRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQ 324 (509)
Q Consensus 246 lr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 324 (509)
+|+||++ .++++++.+..... ...+.+.+++.+ +.+++..+.+
T Consensus 276 ~~iG~~~---~~~~l~~~l~~~~~~~t~~~~~~~~aa------------------------------~~a~L~~~~~--- 319 (420)
T 2pb2_A 276 FPVSAML---TTQEIASAFHVGSHGSTYGGNPLACAV------------------------------AGAAFDIINT--- 319 (420)
T ss_dssp SCCEEEE---ECHHHHTTCC----CCEECCCHHHHHH------------------------------HHHHHHHHSS---
T ss_pred CceEEEE---EhHHHHHhhcCCCcCcccCcCHHHHHH------------------------------HHHHHHHHHh---
Confidence 9999998 57778776654222 233445551111 2222222110
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHH
Q psy13922 325 PGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSI----EGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFE 400 (509)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 400 (509)
+.+.+.++++++++.+.|+++ |.+....+. |.++|+++..+. + .....+. .
T Consensus 320 -------------~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~v~~~~~~---------~-~~~~~l~-~ 374 (420)
T 2pb2_A 320 -------------PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGM-GLLIGAELKPKY---------K-GRARDFL-Y 374 (420)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-TTEEEEEECGGG---------T-TCHHHHH-H
T ss_pred -------------ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec-ceEEEEEECCCc---------h-HHHHHHH-H
Confidence 244556666666666666553 333334444 445565554110 0 1234444 4
Q ss_pred HHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEE
Q psy13922 401 LLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFR 480 (509)
Q Consensus 401 ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 480 (509)
.|.++||.+.|+. ++ ++|
T Consensus 375 ~l~~~Gi~v~~~~----------------------------------------------------~~----------~iR 392 (420)
T 2pb2_A 375 AGAEAGVMVLNAG----------------------------------------------------AD----------VMR 392 (420)
T ss_dssp HHHHTTEECEESS----------------------------------------------------TT----------EEE
T ss_pred HHHHCCCEEEeCC----------------------------------------------------CC----------EEE
Confidence 4445899998753 12 899
Q ss_pred EEe--ecChHHHHHHHHHHHHHHHHHH
Q psy13922 481 TTI--LPQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 481 ls~--~~~~~~i~~~~~~l~~~~~~~~ 505 (509)
+++ ..+++++++++++|+++++++.
T Consensus 393 l~~~~~~t~eei~~~~~~l~~~l~~~~ 419 (420)
T 2pb2_A 393 FAPSLVVEEADIHEGMQRFAQAVGKVV 419 (420)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 995 4899999999999999987653
No 148
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.94 E-value=6.3e-25 Score=228.73 Aligned_cols=296 Identities=13% Similarity=0.125 Sum_probs=205.4
Q ss_pred CCCCCCC--HHHHHHHHHHHhcccCCCcccCCC-CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh
Q psy13922 21 FDDPRFP--DDVKQRAQAVLDGCRGQSVGSYTD-SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 21 ~~~~~~p--~~v~~a~~~~l~~~~~~~~~~Y~~-~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 97 (509)
.+.|+++ +.+++++.+.+.. + .|++ ..+..++|++++++++ .++|++|+|+++++..+++++.
T Consensus 23 ~~~p~~~~p~~~~~a~~~~~~~---~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~l~~l~ 88 (424)
T 2po3_A 23 VGRPNRIDRARLYERLDRALDS---Q---WLSNGGPLVREFEERVAGLAG--------VRHAVATCNATAGLQLLAHAAG 88 (424)
T ss_dssp TTCCCCCCHHHHHHHHHHHHHH---T---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHHT
T ss_pred ccCCCCCChHHHHHHHHHHHhc---C---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcC
Confidence 3677774 4899999888876 2 3777 7888999999999993 2589999999999999999985
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
+|| .|+++.|+|.++...+...|++++.++.+++ ++.+|++.|++.+++ ++++|++++ |||...
T Consensus 89 -~gd----~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~-----~~~~v~~~~---~tG~~~-- 152 (424)
T 2po3_A 89 -LTG----EVIMPSMTFAATPHALRWIGLTPVFADIDPD-TGNLDPDQVAAAVTP-----RTSAVVGVH---LWGRPC-- 152 (424)
T ss_dssp -CCS----EEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TSSBCHHHHGGGCCT-----TEEEEEEEC---GGGCCC--
T ss_pred -CCC----EEEECCCccHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhhCc-----CCcEEEEEC---CCCCcC--
Confidence 666 9999999999999999999999999998753 578899999988876 789988864 899874
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCC-cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQ-DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
++++|+++|+++|++||+|++|. ++.+++ .++.. ..+ +++.||||.. +++|.|+||++. .
T Consensus 153 -~l~~i~~la~~~~~~li~Dea~~~g~~~~~----~~~~~----------~~d-i~~~S~sk~K-~l~~~~~G~~v~--~ 213 (424)
T 2po3_A 153 -AADQLRKVADEHGLRLYFDAAHALGCAVDG----RPAGS----------LGD-AEVFSFHATK-AVNAFEGGAVVT--D 213 (424)
T ss_dssp -CHHHHHHHHHHTTCEEEEECTTCTTCEETT----EETTS----------SSS-EEEEECCTTS-SSCCSSCEEEEE--S
T ss_pred -CHHHHHHHHHHcCCEEEEECccccCCeECC----eeccc----------ccC-EEEEeCCCCC-CccCCCCeEEEe--C
Confidence 59999999999999999999999 465542 11110 112 6677999555 466789999983 3
Q ss_pred CHHHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 257 DPGVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 257 ~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
++++++.+...... ............+ ..+ .+.+....+ ...+
T Consensus 214 ~~~l~~~l~~~~~~~~~~~~~~~~~g~~-----~~~--------------------~~~~aa~~l-----------~~~~ 257 (424)
T 2po3_A 214 DADLAARIRALHNFGFDLPGGSPAGGTN-----AKM--------------------SEAAAAMGL-----------TSLD 257 (424)
T ss_dssp CHHHHHHHHHHHBTTTTCTTCCTTCCCB-----CCC--------------------CHHHHHHHH-----------HHHH
T ss_pred CHHHHHHHHHHHhcCccccccccccCcC-----CCc--------------------CHHHHHHHH-----------HHHH
Confidence 38999988776542 1111110000000 000 111111111 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCce---eEEe-ecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGA---MYAF-PQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g---~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
+++...+..+++++++.+.|.++|++.+.. +.++ +++| +.++ ... .+. +..+ +.+.|.++||.+.
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~--~~~------~~~-~~~~-l~~~L~~~gI~v~ 327 (424)
T 2po3_A 258 AFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEID--EAT------TGI-HRDL-VMEVLKAEGVHTR 327 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEEC--HHH------HSS-CHHH-HHHHHHHTTEECB
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEEC--Ccc------chh-hHHH-HHHHHHHCCCcee
Confidence 356677778888888999999888888765 4443 2333 4332 200 022 2333 4566778899998
Q ss_pred c
Q psy13922 411 P 411 (509)
Q Consensus 411 p 411 (509)
+
T Consensus 328 ~ 328 (424)
T 2po3_A 328 A 328 (424)
T ss_dssp C
T ss_pred c
Confidence 7
No 149
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.94 E-value=5.3e-26 Score=234.35 Aligned_cols=211 Identities=15% Similarity=0.153 Sum_probs=146.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
|+.+++++.+.+... .+. |. .+..++++++++++.+.+| .++|++|+|+++++..+++.+... |.
T Consensus 54 ~p~v~~a~~~~~~~~---~~~-~~--~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea~~~al~~~~~~~~~~g~- 122 (395)
T 3nx3_A 54 HAKFNAKIKAQVDKL---LHT-SN--LYYNENIAAAAKNLAKASA----LERVFFTNSGTESIEGAMKTARKYAFNKGV- 122 (395)
T ss_dssp CHHHHHHHHHHHTTC---SCC-CT--TSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred CHHHHHHHHHHHHhc---ccc-cc--ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHHHHHHHHHHHhhccCC-
Confidence 789999999998772 211 21 1223455555555555544 579999999999999999887643 10
Q ss_pred CCCeEEEcCCCChhHHHHHHhcC-------------CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFN-------------MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
+++.|++..|+|+++.......+ .++..++. .|++.|++.+++ ++++|+++.++|
T Consensus 123 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~-----~~~~v~~~~~~~ 190 (395)
T 3nx3_A 123 KGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNE-----KTCAIILESVQG 190 (395)
T ss_dssp TTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCT-----TEEEEEEESEEC
T ss_pred CCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccC-----CeEEEEEeCccC
Confidence 13399999999998765444332 34444442 278999988875 788999887777
Q ss_pred CCCCC-CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 170 PTGQV-LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 170 PtG~~-~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
++|.. ++++++++|.++|++||+++|+||+|.+|...+. ...... .+.. .+ +.|+||.+ | +|+|+
T Consensus 191 ~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~--~~~~~~--~~~~-----~d---~~t~sK~~-~-~G~~~ 256 (395)
T 3nx3_A 191 EGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK--FFAYEH--AQIL-----PD---IMTSAKAL-G-CGLSV 256 (395)
T ss_dssp TTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGG--GTCC-----CS---EEEECGGG-T-TTSCC
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc--chhHHh--cCCC-----CC---EEEecccc-c-CCCce
Confidence 77765 7899999999999999999999999998865432 111111 1111 11 34789999 5 59999
Q ss_pred EEEeeecCCHHH-HHHHHHhhh-cccCcchh
Q psy13922 249 GYSEVINLDPGV-KAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 249 G~v~~~~~~~~~-~~~l~~~~~-~~~~~~~~ 277 (509)
||++ .++++ ++.+..... ...+.+.+
T Consensus 257 G~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 284 (395)
T 3nx3_A 257 GAFV---INQKVASNSLEAGDHGSTYGGNPL 284 (395)
T ss_dssp EEEE---ECHHHHHHHSCTTCCSSCBSCCHH
T ss_pred EEEE---EchhhhhhhcCCcccCCCCCCCHH
Confidence 9998 68888 787765432 33445555
No 150
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.94 E-value=7.8e-26 Score=236.22 Aligned_cols=205 Identities=9% Similarity=-0.002 Sum_probs=142.1
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVDGKK 104 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~~~ 104 (509)
||.+++++.+++.+ .....| +.....++++.+++++ + .+++|++|+|+++++..+++.++. +++
T Consensus 73 ~p~v~~a~~~~~~~---~~~~~~-~~~~~~~l~~~la~~~----~---~~~~v~~~~sGsea~~~ai~~a~~~~~~~--- 138 (434)
T 3l44_A 73 HPHITKAITTAAEN---GVLYGT-PTALEVKFAKMLKEAM----P---ALDKVRFVNSGTEAVMTTIRVARAYTGRT--- 138 (434)
T ss_dssp CHHHHHHHHHHHHH---CSCCSS-CCHHHHHHHHHHHHHC----T---TCSEEEEESSHHHHHHHHHHHHHHHHCCC---
T ss_pred CHHHHHHHHHHHHh---CcCCCC-CCHHHHHHHHHHHHhC----C---CCCEEEEeCchHHHHHHHHHHHHHhhCCC---
Confidence 79999999999987 333324 3445567777777765 2 468999999999999999998865 445
Q ss_pred CeEEEcCCCChhHHHHHHhcCCE-EEEEecCCCCCC------------CCCHHHHHHHHHhhhccCCceEEEEeCCCCCC
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNME-QIGYYLDESKQW------------GLPISELERSITEARKHCNPRAIVIINPGNPT 171 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~-~~~v~~~~~~~~------------~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt 171 (509)
.|++..|+|+++...+...+.. ...+.......+ .-|++.|++.+++... ++++|+++.++|++
T Consensus 139 -~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~--~~~~vi~ep~~~~~ 215 (434)
T 3l44_A 139 -KIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGH--EVAAILVEPIVGNF 215 (434)
T ss_dssp -EEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGG--GEEEEEECSSBCTT
T ss_pred -EEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCC--CEEEEEEcCCCCCC
Confidence 9999999999876544433221 111111100000 0189999999985311 46666666666677
Q ss_pred CCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 172 GQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 172 G~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
|.+. +++++++|.++|++||+++|+||+|.+| ..+ ........ +..+ + +.|+||.+ | +|+|+||
T Consensus 216 G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g--~~~~~~~~--~~~~-----d---i~t~sK~~-~-~G~~iG~ 280 (434)
T 3l44_A 216 GIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFM--YGGAQDLL--GVTP-----D---LTALGKVI-G-GGLPIGA 280 (434)
T ss_dssp SCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSS--SSCHHHHH--TCCC-----S---EEEEEGGG-G-TTSSCEE
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecc--ccHHHHHc--CCCC-----C---eeehhhhh-c-CCcCeee
Confidence 7655 8899999999999999999999999998 443 22222221 1111 1 44789999 6 8999999
Q ss_pred EeeecCCHHHHHHHHH
Q psy13922 251 SEVINLDPGVKAMLHK 266 (509)
Q Consensus 251 v~~~~~~~~~~~~l~~ 266 (509)
++ +++++++.+.+
T Consensus 281 ~~---~~~~i~~~~~~ 293 (434)
T 3l44_A 281 YG---GKKEIMEQVAP 293 (434)
T ss_dssp EE---ECHHHHTTBTT
T ss_pred EE---EcHHHHHhhcc
Confidence 97 79999988765
No 151
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.94 E-value=4.8e-25 Score=228.30 Aligned_cols=302 Identities=14% Similarity=0.048 Sum_probs=194.8
Q ss_pred CCCCCCHHHHHHHHHHHhcccCC---CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQ---SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~---~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.+.+|+.+++++.+.+...... ....|.......++++.+.+.+.+.+| .++++|++|+| ++++..+++++++
T Consensus 33 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG-t~a~~~~~~~~~~ 109 (417)
T 3n0l_A 33 SENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG-SQANQGVYAALIN 109 (417)
T ss_dssp TCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHSC
T ss_pred ccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH-HHHHHHHHHHhcC
Confidence 44556999999998887542110 011244445555666655556655556 35567888888 7999999999999
Q ss_pred CCCCCCCeEEEcCCCChhHHH---HHHh--cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSA---SLAE--FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~---~~~~--~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
+|| +|+++.|+|.++.. .+.. .+..++.++.+ .++.+|++.|++.+++. ++++|++++|+| |.
T Consensus 110 ~gd----~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~----~~~~v~~~~~~~--G~ 177 (417)
T 3n0l_A 110 PGD----KILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKE----KPKLIVCGASAY--AR 177 (417)
T ss_dssp TTC----EEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHH----CCSEEEECCSSC--CS
T ss_pred CCC----EEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhc----CCeEEEECCccc--Cc
Confidence 998 99999999987654 3333 34556666665 35689999999999843 799999888887 78
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCC-cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQ-DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
.++ +++|.++|++||+++|+|++|. ++.+.+. ....+. .. .+++.|+||.+ +|.|+||++
T Consensus 178 ~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~~~~-----------~~-di~~~s~sK~l---~g~~~G~~~ 238 (417)
T 3n0l_A 178 VID---FAKFREIADEIGAYLFADIAHIAGLVVAGE-HPSPFP-----------YA-HVVSSTTHKTL---RGPRGGIIM 238 (417)
T ss_dssp CCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTS-SCCCTT-----------TC-SEEEEESSTTT---CSCSCEEEE
T ss_pred cCC---HHHHHHHHHHcCCEEEEECccchhhhhccc-CCCccc-----------cc-eEEEeeCcccc---CCCCeeEEE
Confidence 877 8999999999999999999964 3333221 111110 11 35677999977 578899997
Q ss_pred eecCCHHHHHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 253 VINLDPGVKAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
. .++++++.+....... .+++.. ..+++..++.
T Consensus 239 ~--~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~aa~~~a~~--------- 273 (417)
T 3n0l_A 239 T--NDEELAKKINSAIFPGIQGGPLMH----------------------------------VIAAKAVGFK--------- 273 (417)
T ss_dssp E--SCHHHHHHHHHHHTTTTCSSCCHH----------------------------------HHHHHHHHHH---------
T ss_pred E--CCHHHHHHHhhhhCCcccCCcHHH----------------------------------HHHHHHHHHH---------
Confidence 3 3489999887765422 222222 2222222211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE
Q psy13922 331 EQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI 409 (509)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 409 (509)
....+++++.++.+.++++.+.+.|.+. |+.+.. +..+.++|+++..+ ++ +...+..+|+++||.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~----------~~--~~~~~~~~l~~~gi~v 340 (417)
T 3n0l_A 274 FNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHLVLMSFLDR----------EF--SGKDADLALGNAGITA 340 (417)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTS----------SS--CHHHHHHHHHHTTEEC
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceEEEEEcccC----------CC--CHHHHHHHHHHcCeEE
Confidence 1112336778888888899999999885 887764 34455677666411 11 2333677888899999
Q ss_pred ecCCCC
Q psy13922 410 VPGAGF 415 (509)
Q Consensus 410 ~pg~~f 415 (509)
.++..+
T Consensus 341 ~~~~~~ 346 (417)
T 3n0l_A 341 NKNTVP 346 (417)
T ss_dssp EECCCT
T ss_pred eccccC
Confidence 986543
No 152
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.94 E-value=4.6e-26 Score=238.36 Aligned_cols=212 Identities=10% Similarity=0.034 Sum_probs=146.5
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVDGK 103 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~~ 103 (509)
-|+.+++++.+++... ..|+...|..++++++++.+.+.++... +++|++|+|+++++..+++.++. +++
T Consensus 60 ~~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~ggsea~~~al~~~~~~~~~~-- 131 (439)
T 3dxv_A 60 GHPAIVAAVSAAAANP-----AGATILSASNAPAVTLAERLLASFPGEG-THKIWFGHSGSDANEAAYRAIVKATGRS-- 131 (439)
T ss_dssp SCHHHHHHHHHHHHSC-----SCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEEEEESSHHHHHHHHHHHHHHHHSCC--
T ss_pred CCHHHHHHHHHHHHhc-----cCccccccCCHHHHHHHHHHHHhCCCCC-CCEEEEeCCHHHHHHHHHHHHHHHhCCC--
Confidence 4789999999998872 2255455667788888888877765322 16999999999999999998632 444
Q ss_pred CCeEEEcCCCChhHHHHHHhcCCE-E--------------EEEecCCCCCCCC-----CHHHHHHHHHhhhccCCceEEE
Q psy13922 104 KPGVLIPIPQYPLYSASLAEFNME-Q--------------IGYYLDESKQWGL-----PISELERSITEARKHCNPRAIV 163 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~g~~-~--------------~~v~~~~~~~~~~-----d~~~L~~~i~~~~~~~~~~~iv 163 (509)
.|++.+|.|+++...+...+.. . ..++.+.. +.. |++.|++.+++.. ..++++|+
T Consensus 132 --~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~le~~l~~~~-~~~~~~vi 206 (439)
T 3dxv_A 132 --GVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPY--RNDPTGDAILTLLTEKLAAVP-AGSIGAAF 206 (439)
T ss_dssp --EEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCB--TTBTTSHHHHHHHHHHHHTSC-TTCEEEEE
T ss_pred --EEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcc--cccccHHHHHHHHHHHHHhcC-CCCEEEEE
Confidence 8999999998876655544322 1 11222111 111 6899999995110 12678888
Q ss_pred EeCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 164 IINPGNPTGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 164 i~~p~NPtG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
++.++|++|.+. +++++++|.++|++||+++|+||+|.+|...+. ...... .+.. .+++ ||||.+ |
T Consensus 207 ~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~--~~~~~~--~~~~-----~di~---s~sK~~-~ 273 (439)
T 3dxv_A 207 IEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR--LHCFEH--EGFV-----PDIL---VLGKGL-G 273 (439)
T ss_dssp ECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS--SSGGGG--TTCC-----CSEE---EECGGG-G
T ss_pred EccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch--hhHHHh--cCCC-----CCEE---EEcchh-c
Confidence 888888888755 555699999999999999999999998765432 111111 1111 1233 889999 5
Q ss_pred CCCCeeEEEeeecCCHHHHHHHHHh
Q psy13922 243 ECGLRGGYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 243 ~~Glr~G~v~~~~~~~~~~~~l~~~ 267 (509)
+|+|+||++ +++++++.+...
T Consensus 274 -~G~riG~~~---~~~~~~~~~~~~ 294 (439)
T 3dxv_A 274 -GGLPLSAVI---APAEILDCASAF 294 (439)
T ss_dssp -TTSCCEEEE---EEHHHHTSCSSS
T ss_pred -CCcceEEEE---ECHHHHhhhcCC
Confidence 699999998 788988877654
No 153
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.2e-25 Score=239.02 Aligned_cols=349 Identities=12% Similarity=0.064 Sum_probs=233.7
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-----DVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-----~gd 101 (509)
++.+.+.+.+++..........|....|..++++++++++.+.+|.+..++++++|+|+++++.++++++++ +|-
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~ 156 (497)
T 3mc6_A 77 GDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGI 156 (497)
T ss_dssp CHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred chHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 467888888888764333334466677888999999999999989776688999999999999999999975 451
Q ss_pred CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 102 GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
.++.|+++.|+|..+...++..|++++.++.++ .++.+|++.|++++++ ++++|++++|+||||.+.+ ++
T Consensus 157 -~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~-----~~~~v~~~~p~nptG~~~~---l~ 226 (497)
T 3mc6_A 157 -TEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINK-----NTVLLVGSAPNFPHGIADD---IE 226 (497)
T ss_dssp -SSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCS-----SEEEEEEETTCTTTCCCCS---CT
T ss_pred -CCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhh-----CCEEEEEECCCCCCCcCCC---HH
Confidence 223999999999999999999999999999876 2468999999999876 7999999999999999977 88
Q ss_pred HHHHHHHHCCcEEEEcccCCccccc----CCC-ccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 182 DIIKFAHREKLFLFADEVYQDNVYA----EGS-KFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 182 ~l~~ia~~~~i~lI~Deay~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
+|.++|+++|+++|+|++|..+... .+. ..+++. ....+.+++ +.|++|.+. +|.++|++++ .
T Consensus 227 ~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~-------~~~~g~d~~-~~s~~K~l~--~~~~~g~~~~--~ 294 (497)
T 3mc6_A 227 GLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLD-------FRVPGVTSI-SCDTHKYGF--APKGSSVIMY--R 294 (497)
T ss_dssp TTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCS-------TTSTTCCEE-EEETTTTTC--CCSSCEEEEC--S
T ss_pred HHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCcccc-------ccCCCCcEE-EECchhhcC--CCCCceeEEe--c
Confidence 8999999999999999999865432 000 000110 000122344 558899863 7788999973 4
Q ss_pred CHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHH
Q psy13922 257 DPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSR 335 (509)
Q Consensus 257 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 335 (509)
++.+. ....... .+.... . ..+.+.. ........++..++. .-...
T Consensus 295 ~~~~~-~~~~~~~~~~~~~~-~---------~~~~~~g-------------~~~~~~~~a~~aal~---------~l~~~ 341 (497)
T 3mc6_A 295 NSDLR-MHQYYVNPAWTGGL-Y---------GSPTLAG-------------SRPGAIVVGCWATMV---------NMGEN 341 (497)
T ss_dssp SHHHH-TTTSCCBTTCTTSC-B---------CCSSSCS-------------SCBHHHHHHHHHHHH---------HHHHH
T ss_pred CHHHH-hhhhcccccccCCC-c---------CCcCccc-------------CCcchhHHHHHHHHH---------HHhHH
Confidence 44333 2211111 110000 0 0000000 000000111111111 00112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCCeec-cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCC
Q psy13922 336 EKQSVLDSLKQRAKMVADTFNS-IEGMSCN-PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGA 413 (509)
Q Consensus 336 ~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 413 (509)
.+++..+...++++++.+.|++ +||+++. ++.++++.| ... +. +..+ +...|.++||.+.++.
T Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~-~~~------------~~-~~~~-l~~~L~~~Gi~v~~~~ 406 (497)
T 3mc6_A 342 GYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISF-SSK------------TL-NIHE-LSDRLSKKGWHFNALQ 406 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEE-ECT------------TT-THHH-HHHHHHTTTCBCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEE-eCC------------CC-CHHH-HHHHHHhCCEEEecCC
Confidence 3577788888899999999999 7999887 456666655 222 11 2333 4556667799887543
Q ss_pred CCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee-cChHHHHH
Q psy13922 414 GFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL-PQPEKLKA 492 (509)
Q Consensus 414 ~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~-~~~~~i~~ 492 (509)
. +. .+|+++. .+.+++++
T Consensus 407 ~---------------------------------------------------~~----------~~ri~~~~~t~e~i~~ 425 (497)
T 3mc6_A 407 K---------------------------------------------------PV----------ALHMAFTRLSAHVVDE 425 (497)
T ss_dssp S---------------------------------------------------SC----------CEEEECCTTTTCTHHH
T ss_pred C---------------------------------------------------CC----------eEEEEEeCCCHHHHHH
Confidence 1 11 4677776 78888888
Q ss_pred HHHHHHHHHHHHHh
Q psy13922 493 MLEKFREFHEEFLA 506 (509)
Q Consensus 493 ~~~~l~~~~~~~~~ 506 (509)
++++|+++++++.+
T Consensus 426 ~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 426 ICDILRTTVQELKS 439 (497)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888876643
No 154
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.94 E-value=5.6e-25 Score=224.65 Aligned_cols=350 Identities=13% Similarity=0.102 Sum_probs=227.2
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~g 100 (509)
+.|.+++ +.+++.+.+.. . .|.+..+..+++++++++++ .+++++++|+++++..+++++ .++|
T Consensus 14 ~~~~~~~-~~~~~~~~~~~---~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~~~~~~~~~~g 78 (374)
T 3uwc_A 14 QFADIEP-YLNDLREFIKT---A---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDALAMSFKMLNIGAG 78 (374)
T ss_dssp HTSSCHH-HHHHHHHHHHH---T---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHHHHHHHHTTCCTT
T ss_pred CCCCchH-HHHHHHHHHHc---C---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCC
Confidence 5677877 88999888876 2 27778888999999999983 238899999999999999999 8888
Q ss_pred CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHH
Q psy13922 101 DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENI 180 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l 180 (509)
| .|+++.|+|.++...++..|.+++.++.+ .++.+|++.+++.+++ ++++|+ |+||||...+ +
T Consensus 79 d----~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~-----~~~~v~---~~n~~G~~~~---~ 141 (374)
T 3uwc_A 79 D----EVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITD-----KTKAIM---PVHYTGNIAD---M 141 (374)
T ss_dssp C----EEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCT-----TEEEEC---CBCGGGCCCC---H
T ss_pred C----EEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCC-----CceEEE---EeCCcCCcCC---H
Confidence 8 99999999999999999999999999987 3468899999998876 688877 8999999876 8
Q ss_pred HHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc--cccCCCCCCeeEEEeeecCCH
Q psy13922 181 QDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS--KGYMGECGLRGGYSEVINLDP 258 (509)
Q Consensus 181 ~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~G~~Glr~G~v~~~~~~~ 258 (509)
++|.++|+++|+++|+|++|..+..-....... .. .+++.|+| |.+ |.+|. +|+++. .++
T Consensus 142 ~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~-------------~~-d~~~~s~~~~K~l-~~~g~-~g~~~~--~~~ 203 (374)
T 3uwc_A 142 PALAKIAKKHNLHIVEDACQTILGRINDKFVGS-------------WG-QFACFSLHPLKNL-NVWSD-AGVIIT--HSD 203 (374)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEETTS-------------SS-SEEEEECSSSSSS-CCSSC-CEEEEE--SCH
T ss_pred HHHHHHHHHcCCEEEEeCCCccCceeCCeeccc-------------cc-cEEEEeCCCCCcC-Cccce-eEEEEe--CCH
Confidence 899999999999999999998754321111110 01 34456866 999 54475 788763 677
Q ss_pred HHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHH
Q psy13922 259 GVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQ 338 (509)
Q Consensus 259 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 338 (509)
.+.+.+.......... .... ....++. ....+..++. ....+.++
T Consensus 204 ~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~------------------~~~~~~aa~~---------~~~~~~~~ 248 (374)
T 3uwc_A 204 EYAEKLRLYRNHGLIN-RDVC-------VEYGINC------------------RMDTIQAVIA---------NRLMNQLE 248 (374)
T ss_dssp HHHHHHHHHTBTTEEE-TTEE-------SSCCCBC------------------BCCHHHHHHH---------HHHGGGHH
T ss_pred HHHHHHHHHHhcCccc-cCcc-------ccccccC------------------CCCHHHHHHH---------HHHHHHHH
Confidence 8888887665411110 0000 0000000 0011111100 00112256
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC-Ceec-cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 339 SVLDSLKQRAKMVADTFNSIEG-MSCN-PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 339 ~~~~~~~~~~~~l~~~L~~~~g-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
+..+..+++.+.+.+.|.++++ +.+. .+.++...|..+.+.. .+... +.+.|.++||.+.++....
T Consensus 249 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-l~~~L~~~gi~v~~~~~~~ 316 (374)
T 3uwc_A 249 TITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV-----------KYRDQ-LFQYLKDNGIEVKIHYPIA 316 (374)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE-----------TTHHH-HHHHHHHTTBCCBCSCSSC
T ss_pred HHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc-----------CCHHH-HHHHHHHCCCccccCCCCc
Confidence 6777778888889999998866 6654 2333333332222110 12333 4566677899999875222
Q ss_pred CCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHH
Q psy13922 417 QVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAML 494 (509)
Q Consensus 417 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~ 494 (509)
......+.++... ....|... ......+|+++. +++++|+.++
T Consensus 317 ~~~~~~~~~~~~~--------------~~~~~~~~---------------------~~~~~~lrl~~~~~~t~edi~~~~ 361 (374)
T 3uwc_A 317 MHLQPAAKSLGYQ--------------QGDFPMAE---------------------KHGEAVITLPAHPYLTEEEINYII 361 (374)
T ss_dssp GGGSGGGGGGCCC--------------TTSCHHHH---------------------HHHHHEEEECCCTTSCHHHHHHHH
T ss_pred cccChhhhhcCCc--------------cCCCccHH---------------------HHHhCEEEccCCCCCCHHHHHHHH
Confidence 2000000000000 00000000 000128999988 7999999999
Q ss_pred HHHHHHHHH
Q psy13922 495 EKFREFHEE 503 (509)
Q Consensus 495 ~~l~~~~~~ 503 (509)
+.|++++++
T Consensus 362 ~~l~~~l~~ 370 (374)
T 3uwc_A 362 KKVREFYLE 370 (374)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999999864
No 155
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.94 E-value=1.3e-24 Score=221.71 Aligned_cols=354 Identities=12% Similarity=0.079 Sum_probs=227.6
Q ss_pred CCCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh---h
Q psy13922 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL---I 97 (509)
Q Consensus 21 ~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l---~ 97 (509)
++.+.+|+.+++++.+.+.. .. |.+.....+++++++++++ . +++++|+|+++++..+++++ .
T Consensus 6 ~~~~~~~~~v~~a~~~~~~~---~~---~~~~~~~~~l~~~la~~~~------~--~~v~~~~ggt~al~~~~~~~~~~~ 71 (375)
T 2fnu_A 6 YSEPCLDKEDKKAVLEVLNS---KQ---LTQGKRSLLFEEALCEFLG------V--KHALVFNSATSALLTLYRNFSEFS 71 (375)
T ss_dssp SCCCCCCHHHHHHHHHHHTS---SC---CSSSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHSSCCC
T ss_pred cCCCCCCHHHHHHHHHHHHc---Cc---ccCChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHhcccC
Confidence 35688999999999999876 22 3345567899999999983 2 28999999999999999999 7
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
++|| +|+++.|+|.++...++..|++++.++.++++ .+|++.|++.+++ ++++|++++| ||.+.+
T Consensus 72 ~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d~~~l~~~i~~-----~~~~v~~~~~---tG~~~~- 136 (375)
T 2fnu_A 72 ADRN----EIITTPISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINE-----RTKAIVSVDY---AGKSVE- 136 (375)
T ss_dssp TTSC----EEEECSSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCT-----TEEEEEEECG---GGCCCC-
T ss_pred CCCC----EEEECCCccHhHHHHHHHCCCEEEEeccCCCC--CCCHHHHHhhcCc-----CceEEEEeCC---cCCccC-
Confidence 7887 99999999999999999999999999987653 6899999988876 7888888776 999987
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc--cccCCCCCCeeEEEeeec
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS--KGYMGECGLRGGYSEVIN 255 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~G~~Glr~G~v~~~~ 255 (509)
+++|.++|+++|+++|+|++|..+..... .. ++. .. .+.+.|+| |.+ |. | +|++++ +
T Consensus 137 --l~~i~~l~~~~~~~li~D~a~~~~~~~~~---~~-------~~~---~~-~i~~~s~s~~K~~-~~-g--~g~~~~-~ 195 (375)
T 2fnu_A 137 --VESVQKLCKKHSLSFLSDSSHALGSEYQN---KK-------VGG---FA-LASVFSFHAIKPI-TT-A--EGGAVV-T 195 (375)
T ss_dssp --HHHHHHHHHHHTCEEEEECTTCTTCEETT---EE-------TTS---SS-SEEEEECCTTSSS-CC-S--SCEEEE-E
T ss_pred --HHHHHHHHHHcCCEEEEECccccCCeECC---ee-------ccc---cC-CeEEEeCCCCCCc-cc-c--CceEEE-e
Confidence 88999999999999999999987543211 11 110 01 25566888 999 64 7 566652 2
Q ss_pred CCHHHHHHHHHhhhcccCcchhhhhccccccCC--CCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHH
Q psy13922 256 LDPGVKAMLHKSISAMLCPTVLALVSLPQLFDD--PRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQF 333 (509)
Q Consensus 256 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 333 (509)
.++++++.+......... ... +..++. ..+.....+ .+.++... .
T Consensus 196 ~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~--------------~~~a~~~~-------------~ 242 (375)
T 2fnu_A 196 NDSELHEKMKLFRSHGML-KKD-----FFEGEVKSIGHNFRLNE--------------IQSALGLS-------------Q 242 (375)
T ss_dssp SCHHHHHHHHHHTBTTEE-ESS-----SSCEEESSCCCBCCCCH--------------HHHHHHHH-------------H
T ss_pred CCHHHHHHHHHHHhcCCc-ccc-----ccccccccccccCCCCH--------------HHHHHHHH-------------H
Confidence 357888888765431110 000 000000 000000000 01111110 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC----Cc-eeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeE
Q psy13922 334 SREKQSVLDSLKQRAKMVADTFNSIEGMSCNPV----QG-AMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGIC 408 (509)
Q Consensus 334 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~ 408 (509)
.+++++..+..+++++++.+.|+++|++++..+ .+ +++.|+.++.. +..+... +...|.++||.
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~-l~~~L~~~gi~ 311 (375)
T 2fnu_A 243 LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQK----------FFTCKKL-ILESLHKRGIL 311 (375)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGG----------GGGGHHH-HHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcc----------ccchHHH-HHHHHHHCCCC
Confidence 123667788888999999999999888887654 12 34446555411 0101333 34555678999
Q ss_pred EecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cC
Q psy13922 409 IVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQ 486 (509)
Q Consensus 409 v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~ 486 (509)
+..+ |.+......++ . .......|.... .+ ..++|+++. ++
T Consensus 312 v~~~--~~p~~~~~~~~----~----------~~~~~~~~~~~~-------------~~--------~~~lRi~~~~~~t 354 (375)
T 2fnu_A 312 AQVH--YKPIYQYQLYQ----Q----------LFNTAPLKSAED-------------FY--------HAEISLPCHANLN 354 (375)
T ss_dssp CBCC--CCCGGGSHHHH----H----------HHCCCCCHHHHH-------------HH--------HHEEEECCCTTCC
T ss_pred cccc--ccccccchhhh----c----------CCCccCChHHHH-------------HH--------hCEEEecCCCCCC
Confidence 8832 22200000000 0 000000000000 00 128999998 58
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy13922 487 PEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 487 ~~~i~~~~~~l~~~~~~~~ 505 (509)
+++++.++++|+++++++.
T Consensus 355 ~~~i~~~~~~l~~~~~~~~ 373 (375)
T 2fnu_A 355 LESVQNIAHSVLKTFESFK 373 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999987653
No 156
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.93 E-value=3.2e-25 Score=232.84 Aligned_cols=212 Identities=12% Similarity=0.107 Sum_probs=138.7
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc----CCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE----DVDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~----~gd~ 102 (509)
|+.+++++.+++... . .|....+..+.++++++++.+.++ ...++|++|+|+++|+..+++.++. +|.+
T Consensus 62 ~p~v~~A~~~~~~~~---~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~ 134 (448)
T 3dod_A 62 KKELDDAIKKQLGKI---A--HSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKP 134 (448)
T ss_dssp CHHHHHHHHHHHTTC---S--CCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhc---c--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCC
Confidence 799999999999872 1 133334445677777777776654 3457999999999999999999876 4522
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC-------------EEEEEecCCCCCCCC-----------CHHHHHHHHHhhhccCC
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM-------------EQIGYYLDESKQWGL-----------PISELERSITEARKHCN 158 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~-----------d~~~L~~~i~~~~~~~~ 158 (509)
+++.|++..|+|+++.......+. .+..++... .|.. |++.|++.++... .+
T Consensus 135 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~~~--~~ 210 (448)
T 3dod_A 135 EKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPY--VYRSESGDPDECRDQCLRELAQLLEEHH--EE 210 (448)
T ss_dssp TCCEEEEEC-----------------------------CEEECCCC--CTTSSSCCHHHHHHHHHHHHHHHHHHHG--GG
T ss_pred CCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCc--cccCCccchhhhhHHHHHHHHHHHHhCC--CC
Confidence 345999999999987655444332 122233221 1222 4788999987321 15
Q ss_pred ceEEEEeCCC-CCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec
Q psy13922 159 PRAIVIINPG-NPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC 236 (509)
Q Consensus 159 ~~~ivi~~p~-NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 236 (509)
+++|+++.++ |++|. ..+++++++|.++|++||++||+||+|.+|...+. ...... .++.+ + +.+|
T Consensus 211 ~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~--~~a~~~--~~~~~-----d---i~t~ 278 (448)
T 3dod_A 211 IAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGK--MFACEH--ENVQP-----D---LMAA 278 (448)
T ss_dssp EEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGG--GTCCC-----S---EEEE
T ss_pred EEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc--hhhhhh--cCCCC-----C---EEEe
Confidence 6777777766 88884 67888899999999999999999999999876542 111111 11111 1 3378
Q ss_pred ccccCCCCC-CeeEEEeeecCCHHHHHHHHH
Q psy13922 237 SKGYMGECG-LRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 237 SK~~~G~~G-lr~G~v~~~~~~~~~~~~l~~ 266 (509)
||.+ | +| +|+||++ +++++++.+.+
T Consensus 279 sK~l-~-~G~~~ig~v~---~~~~~~~~~~~ 304 (448)
T 3dod_A 279 GKGI-T-GGYLPIAVTF---ATEDIYKAFYD 304 (448)
T ss_dssp CGGG-G-TTSSCCEEEE---EEHHHHHTTCS
T ss_pred cccc-c-CCcCceEEEE---ECHHHHHHhhh
Confidence 9999 5 69 5999998 79999998865
No 157
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.93 E-value=3.6e-25 Score=232.31 Aligned_cols=212 Identities=11% Similarity=0.082 Sum_probs=142.4
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--------
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-------- 98 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-------- 98 (509)
|+.+++++.+.+.... ...+ ..+..++++++++.+.+.++ ..+++|++|+|+++++..+++.+..
T Consensus 68 ~~~v~~a~~~~~~~~~---~~~~--~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~ 140 (449)
T 3a8u_X 68 RKEIQEAVAKQLSTLD---YSPG--FQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSECALTAVKMVRAYWRLKGQA 140 (449)
T ss_dssp CHHHHHHHHHHTTTCS---CCCS--SSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhCC---Cccc--cccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 7999999999987732 1111 01223355555555555444 3577999999999999999998864
Q ss_pred CCCCCCCeEEEcCCCChhHHH-HHHhcC--------------CEEEEEecCCCCCC-CCC--------HHHHHHHHHhhh
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSA-SLAEFN--------------MEQIGYYLDESKQW-GLP--------ISELERSITEAR 154 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~-~~~~~g--------------~~~~~v~~~~~~~~-~~d--------~~~L~~~i~~~~ 154 (509)
+++ .|++..|+|+++.. .+...| ...+.+|.....+| ++| ++.|++.+++..
T Consensus 141 ~~~----~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~ 216 (449)
T 3a8u_X 141 TKT----KMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD 216 (449)
T ss_dssp TCC----EEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC
T ss_pred CCC----EEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC
Confidence 445 99999999998643 444333 33333332111111 256 999999997421
Q ss_pred ccCCceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEE
Q psy13922 155 KHCNPRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASF 233 (509)
Q Consensus 155 ~~~~~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i 233 (509)
. .++++|+++..+|+||. ..+++++++|.++|++||+++|+||+|.+|...+. ...+... +... +++
T Consensus 217 ~-~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~--~~~~~~~--~~~~-----di~-- 284 (449)
T 3a8u_X 217 A-SNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGS--MFGADSF--GVTP-----DLM-- 284 (449)
T ss_dssp G-GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSHHHHH--TCCC-----SEE--
T ss_pred C-CCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCc--chhhhhc--CCCC-----CEE--
Confidence 0 14666665544678996 66799999999999999999999999988765432 2222221 1111 233
Q ss_pred EecccccCCCCC-CeeEEEeeecCCHHHHHHHHHh
Q psy13922 234 MSCSKGYMGECG-LRGGYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 234 ~S~SK~~~G~~G-lr~G~v~~~~~~~~~~~~l~~~ 267 (509)
|+||.+ | +| +|+||++ .++++++.+...
T Consensus 285 -s~sK~l-~-~G~~~~G~~~---~~~~~~~~l~~~ 313 (449)
T 3a8u_X 285 -CIAKQV-T-NGAIPMGAVI---ASTEIYQTFMNQ 313 (449)
T ss_dssp -EECGGG-G-TTSSCCEEEE---EEHHHHHHHHTC
T ss_pred -EEcccc-c-CCCCceEEEE---ECHHHHHHhhcc
Confidence 889999 5 58 9999998 578898888753
No 158
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.93 E-value=1.6e-25 Score=227.89 Aligned_cols=319 Identities=13% Similarity=0.131 Sum_probs=211.6
Q ss_pred CCCCCCHHHHHHHHHHHhcccCC--C---cccCCCCcchHHHHHHHHHHHhhhcCCCCCCC-c-EEEeCCHHHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQ--S---VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQ-D-VILSAGASDGIKSVLK 94 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~--~---~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~-~-i~~t~G~~~al~~~~~ 94 (509)
++...|+.+++++.+.+.+.... . ..+|. .+..++++++++.+.+.+|. +++ + +++|+|++++++.++.
T Consensus 11 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~t~g~t~a~~~~~~ 86 (362)
T 2c0r_A 11 GPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFIQGGASTQFAMIPM 86 (362)
T ss_dssp SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEESSHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEECCCchHHHHHHHH
Confidence 44557899999999888652111 0 11122 23356777777777777674 443 5 5788999999999999
Q ss_pred HhhcCCCCCCCeEEEcCCCChhH--HHHHHhcCCEEEEEecCCC--CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 95 LLIEDVDGKKPGVLIPIPQYPLY--SASLAEFNMEQIGYYLDES--KQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 95 ~l~~~gd~~~~~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
++.++|| +|+++.+.+.+. ...++..| +++.++.+.+ .++.+|.+.++ +++ ++++|++++|+||
T Consensus 87 ~l~~~gd----~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~-----~t~~v~~~~~~n~ 154 (362)
T 2c0r_A 87 NFLKEGQ----TANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD-----NAAYLHLTSNETI 154 (362)
T ss_dssp HHCCTTC----EEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT-----TEEEEEEESEETT
T ss_pred hcCCCCC----eEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCC-----CcCEEEEeCCcCc
Confidence 9999988 998887765543 46677789 9999988632 23345766654 443 7999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 171 TGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
||..++ ++++| +|+++|+|++|..+.. ..++. + .++ ++.|+||.+ |++| +||
T Consensus 155 tG~~~~--~l~~i------~~~~vivD~a~~~~~~-----~~~~~----~-------~d~-~~~s~~K~~-g~~G--~G~ 206 (362)
T 2c0r_A 155 EGAQFK--AFPDT------GSVPLIGDMSSDILSR-----PFDLN----Q-------FGL-VYAGAQKNL-GPSG--VTV 206 (362)
T ss_dssp TTEECS--SCCCC------TTSCEEEECTTTTTSS-----CCCGG----G-------CSE-EEEETTTTT-CCSS--CEE
T ss_pred cceecc--ccccc------CCCEEEEEChhhccCC-----ccchh----H-------CcE-EEEeccccc-cCcC--cEE
Confidence 999755 35555 8999999999987532 11211 1 124 456999999 7888 899
Q ss_pred EeeecCCHHHHHHHHHhh-------------hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhh
Q psy13922 251 SEVINLDPGVKAMLHKSI-------------SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMD 317 (509)
Q Consensus 251 v~~~~~~~~~~~~l~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 317 (509)
++ .++++++.+.+.. ...++++.. .+.++.
T Consensus 207 l~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~----------------------------------~~~a~~ 249 (362)
T 2c0r_A 207 VI---VREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSF----------------------------------GIYMVN 249 (362)
T ss_dssp EE---EEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHH----------------------------------HHHHHH
T ss_pred EE---EcHHHHhhccccCchHHhHHHHhhccCcCCCchHH----------------------------------HHHHHH
Confidence 98 5777665543210 011223332 344444
Q ss_pred cccCCCCCCCCchHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCC-eecc---CCceeEEeecCCCCHHHHHHHhhcCC
Q psy13922 318 CVVNPPQPGEPSYEQFSR--EKQSVLDSLKQRAKMVADTFNSIEGM-SCNP---VQGAMYAFPQMKLPAKAIAKAKAEGK 391 (509)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~---~~~g~~~~~~~~~~~~~~~~~~~~g~ 391 (509)
.+++ ...+ .++++++.++++++++.+.|++++++ .+.. ..++.++|+.++ ...
T Consensus 250 ~al~----------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------- 308 (362)
T 2c0r_A 250 EVLK----------WIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLA--SEE--------- 308 (362)
T ss_dssp HHHH----------HHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECS--CHH---------
T ss_pred HHHH----------HHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcC--Ccc---------
Confidence 4432 1112 36788899999999999999998436 6532 224455665553 110
Q ss_pred CCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCC
Q psy13922 392 CPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFG 471 (509)
Q Consensus 392 ~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (509)
+..++ ...|.++||.+.||..|. +
T Consensus 309 -~~~~~-~~~L~~~gi~~~~g~~~~--------------------------------------------------~---- 332 (362)
T 2c0r_A 309 -LEKEF-VKASEQEGFVGLKGHRSV--------------------------------------------------G---- 332 (362)
T ss_dssp -HHHHH-HHHHHHTTEESCBCCTTT--------------------------------------------------C----
T ss_pred -hHHHH-HHHHHHCCCeeccCCCCC--------------------------------------------------C----
Confidence 13343 455677899888765331 1
Q ss_pred CCCCceeEEEEee--cChHHHHHHHHHHHHHHHHH
Q psy13922 472 QVPGTYHFRTTIL--PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 472 ~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~~ 504 (509)
++|+|++ +++++++.+++.|+++++++
T Consensus 333 ------~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 333 ------GLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp ------SEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ------EEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 7999998 58999999999998887643
No 159
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.93 E-value=1.6e-24 Score=224.73 Aligned_cols=301 Identities=14% Similarity=0.078 Sum_probs=180.4
Q ss_pred CCCCCCHHHHHHHHHHHhcccC-C-Cc-ccCCCCcchHHHHHHHH-HHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRG-Q-SV-GSYTDSPGIEIIRRHVA-QYISRRDGQPADWQDVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~-~-~~-~~Y~~~~g~~~lr~~va-~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~ 97 (509)
+.+.+|+.+++++.+.+...-. + .. ..|+.... .+..+.++ +.+.+.+|. +. ..++++|+++++..+++++.
T Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~--~~-~~v~~~~Gs~a~~~al~~~~ 115 (425)
T 3ecd_A 40 SENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEF-ADEVEALAIERVKRLFNA--GH-ANVQPHSGAQANGAVMLALA 115 (425)
T ss_dssp TCCCCCHHHHHHHTSGGGSSCTTC-------------CCHHHHHHHHHHHHHHTC--SE-EECCCSSHHHHHHHHHHHHC
T ss_pred ccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChH-HHHHHHHHHHHHHHHhCC--CC-ceeecCchHHHHHHHHHHcc
Confidence 4455699999999888854110 0 00 11222211 11233333 444444342 22 23458888899999999999
Q ss_pred cCCCCCCCeEEEcCCCChh---HHHHHHhcCC--EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 98 EDVDGKKPGVLIPIPQYPL---YSASLAEFNM--EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~---~~~~~~~~g~--~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
++|| .|+++.|+|.+ +.......|. +++.++.+++ ++.+|++.|++.+++. ++++|++++|+||+
T Consensus 116 ~~gd----~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~----~~~~v~~~~~~~~~- 185 (425)
T 3ecd_A 116 KPGD----TVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRD-TMLIDYDQVEALAQQH----KPSLIIAGFSAYPR- 185 (425)
T ss_dssp CTTC----EEEEECC------------------CEEEEECCCTT-TSSCCHHHHHHHHHHH----CCSEEEEECSCCCS-
T ss_pred CCCC----EEEEcccccccceecchhhhhcccceeeeecCCCcc-cCccCHHHHHHHHhhc----CCcEEEEccccCCC-
Confidence 9988 99999999987 2222223444 5566665543 5789999999999854 79999999999974
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
. .++++|.++|++||++||+||+|....+..+.....+. .. .+++.|+||.+ +|.|+||++
T Consensus 186 -~---~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-----------~~-di~~~s~sK~l---~g~~~g~~~ 246 (425)
T 3ecd_A 186 -K---LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-----------HA-HVVTSTTHKTL---RGPRGGFVL 246 (425)
T ss_dssp -C---CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-----------TC-SEEEEESSGGG---CCCSCEEEE
T ss_pred -c---CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-----------cC-cEEEecCCccc---CCCCcEEEE
Confidence 3 34899999999999999999996433222121111111 01 25577999987 467899997
Q ss_pred eecCCHHHHHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 253 VINLDPGVKAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
. .++.+.+.+....... .+++.. ...++..++.
T Consensus 247 ~--~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~a~~--------- 281 (425)
T 3ecd_A 247 T--NDEEIAKKINSAVFPGLQGGPLMH----------------------------------VIAGKAVAFG--------- 281 (425)
T ss_dssp E--SCHHHHHHHHHHHC-----CCCHH----------------------------------HHHHHHHHHH---------
T ss_pred e--CCHHHHHHHHhhhCccccCCccHH----------------------------------HHHHHHHHHH---------
Confidence 3 4478888777654422 122222 1111111110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC-CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE
Q psy13922 331 EQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPV-QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI 409 (509)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 409 (509)
....++++.+++.++++++++.+.|.+. |+.+..+ .++.++|+.+.-+ + .+...+...|+++||.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~l~~~gi~v 348 (425)
T 3ecd_A 282 EALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRPK----------G--LKGAQVEQALERAGITC 348 (425)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG----------T--CCHHHHHHHHHHTTEEC
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCCC----------C--CCHHHHHHHHHHcCCEe
Confidence 1111346778888899999999999886 8887753 4666777666410 1 12333567788899999
Q ss_pred ecCC
Q psy13922 410 VPGA 413 (509)
Q Consensus 410 ~pg~ 413 (509)
.++.
T Consensus 349 ~~~~ 352 (425)
T 3ecd_A 349 NKNG 352 (425)
T ss_dssp EECC
T ss_pred cccc
Confidence 9654
No 160
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.93 E-value=3.9e-25 Score=232.82 Aligned_cols=178 Identities=15% Similarity=0.188 Sum_probs=140.4
Q ss_pred cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----HHh
Q psy13922 48 SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----LAE 123 (509)
Q Consensus 48 ~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~~~ 123 (509)
.|+ ..|.+ +++++++++.+.+|. +++++++|+++++..++. +.++|| .|+++.|.|.++... ++.
T Consensus 126 ~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~~~sGt~al~~~l~-~~~~Gd----~Vi~~~~~y~~~~~~~~~~~~~ 194 (464)
T 1ibj_A 126 DYT-RSGNP-TRDALESLLAKLDKA----DRAFCFTSGMAALSAVTH-LIKNGE----EIVAGDDVYGGSDRLLSQVVPR 194 (464)
T ss_dssp SBT-TTCCH-HHHHHHHHHHHHHTC----SEEEEESSHHHHHHHHHT-TSCTTC----EEEEESSCCHHHHHHHHHTSGG
T ss_pred ccc-CCCCH-HHHHHHHHHHHHhCC----CeEEEECCHHHHHHHHHH-HhCCCC----EEEEECCCchhHHHHHHHHHHH
Confidence 376 34545 788888888777773 477888888899998886 778888 999999999998764 456
Q ss_pred cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcc
Q psy13922 124 FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDN 203 (509)
Q Consensus 124 ~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~ 203 (509)
.|++++.++.+ |++.|++.++. ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|...
T Consensus 195 ~G~~v~~v~~~-------d~~~l~~~i~~-----~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g 259 (464)
T 1ibj_A 195 SGVVVKRVNTT-------KLDEVAAAIGP-----QTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSP 259 (464)
T ss_dssp GTCEEEEECTT-------SHHHHHHHCCS-----SEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCT
T ss_pred cCCEEEEeCCC-------CHHHHHHHhcc-----CceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCccc
Confidence 79999998753 78999998876 7999999999999999996 899999999999999999999763
Q ss_pred cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 204 VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.. +.++. .+ ..++++|+||.++|.+|+|+||+++ .++++++.+.....
T Consensus 260 ~~-----~~~~~-----~~------~div~~S~sK~~~g~~Gl~~G~l~~--~~~~l~~~l~~~~~ 307 (464)
T 1ibj_A 260 VL-----SRPLE-----LG------ADIVMHSATKFIAGHSDVMAGVLAV--KGEKLAKEVYFLQN 307 (464)
T ss_dssp TT-----CCGGG-----TT------CSEEEEETTTTTTCSSCCCCEEEEE--CSHHHHHHHHHHHH
T ss_pred cc-----CChhh-----cC------CEEEEECCcccccCCCCCcEEEEEE--ChHHHHHHHHHHHH
Confidence 21 11111 11 2677889999985555999999983 44688888877654
No 161
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.93 E-value=8.4e-25 Score=225.61 Aligned_cols=339 Identities=12% Similarity=0.070 Sum_probs=216.8
Q ss_pred CCCCCCHHHHHHHHHHHhcccC-C-Cccc-CCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRG-Q-SVGS-YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~-~-~~~~-Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.+.+|+.+++++.+.+.+... + .... |+......++++++.+.+.+.+|. +++.|++++| ++++..+++++.+
T Consensus 31 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~--~~~~i~~~sG-t~a~~~a~~~~~~ 107 (405)
T 2vi8_A 31 SENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGA--EHANVQPHSG-AQANMAVYFTVLE 107 (405)
T ss_dssp TCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCCSSH-HHHHHHHHHHHCC
T ss_pred CcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceEEEecCc-HHHHHHHHHHhcC
Confidence 4455699999999888863110 0 0111 322233345554333444444453 3334445666 9999999999988
Q ss_pred CCCCCCCeEEEcCCCChhHHH-H--HHhcC--CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSA-S--LAEFN--MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~-~--~~~~g--~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
+|| .|+++.|+|..+.. . +...| .+++.++.++. ++.+|++.|++.+++. ++++|++ +|+|. |.
T Consensus 108 ~gd----~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~----~~~~v~~-~~~~~-~~ 176 (405)
T 2vi8_A 108 HGD----TVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPE-THVIDYDDVREKARLH----RPKLIVA-AAAAY-PR 176 (405)
T ss_dssp TTC----EEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTT-TCSBCHHHHHHHHHHH----CCSEEEE-CCSSC-CS
T ss_pred CCC----EEEEecccccchhcccchhhhccceeEEEecccccc-cCCcCHHHHHHHHHhc----CCeEEEE-eCCCC-Cc
Confidence 888 99999999987743 1 12233 47888877533 4689999999999864 6888877 44554 34
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
..+ +++|.++|+++|+++|+||+|.......+....+ + . .. .++++|+||.++|++| ||++
T Consensus 177 ~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~-~-------~~-di~~~s~sK~~~g~~g---G~~~- 237 (405)
T 2vi8_A 177 IID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP---V-P-------YA-HFVTTTTHKTLRGPRG---GMIL- 237 (405)
T ss_dssp CCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS---T-T-------TC-SEEEEESSSTTCCCSC---EEEE-
T ss_pred cCC---HHHHHHHHHHcCCEEEEEccccccccccCcCCCc---c-c-------cC-CEEEEeccccCCCCCC---eEEE-
Confidence 433 8999999999999999999998533321111111 0 0 12 2667899999932455 9998
Q ss_pred ecCCHHHHHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 254 INLDPGVKAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
.++++++.+......+ .+++.. ..+++..+++
T Consensus 238 --~~~~~~~~l~~~~~~~~~~~~~~~----------------------------------~~aa~~~al~---------- 271 (405)
T 2vi8_A 238 --CQEQFAKQIDKAIFPGIQGGPLMH----------------------------------VIAAKAVAFG---------- 271 (405)
T ss_dssp --ECHHHHHHHHHHHTTTTCSSCCHH----------------------------------HHHHHHHHHH----------
T ss_pred --EcHHHHHHHHhhhcccccCCCCHH----------------------------------HHHHHHHHHH----------
Confidence 5789998887664322 122222 2222222211
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC-CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE
Q psy13922 332 QF-SREKQSVLDSLKQRAKMVADTFNSIEGMSCNPV-QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI 409 (509)
Q Consensus 332 ~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 409 (509)
.. ..+++++++.++++++++.+.|+++ |+++..+ .+++++|++++.+ +. +... +...|.++||.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~----------~~-~~~~-~~~~l~~~gi~v 338 (405)
T 2vi8_A 272 EALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQ----------QL-TGKT-AEKVLDEVGITV 338 (405)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG----------TC-CHHH-HHHHHHHHTEEC
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccCC----------CC-CHHH-HHHHHHHcCcee
Confidence 11 1347888899999999999999998 8888765 4577888776410 11 2333 456668899999
Q ss_pred ecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeec----
Q psy13922 410 VPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILP---- 485 (509)
Q Consensus 410 ~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~---- 485 (509)
.||..+....+ . .+.+ ++|+++..
T Consensus 339 ~~g~~~~~~~~----------------------------~----------------~~~~--------~iRis~~~~~~~ 366 (405)
T 2vi8_A 339 NKNTIPYDPES----------------------------P----------------FVTS--------GIRIGTAAVTTR 366 (405)
T ss_dssp EEECCTTCSSC----------------------------T----------------TTCS--------EEEEECHHHHHT
T ss_pred ccCcCccccCC----------------------------C----------------CCCC--------ceEEeeeeeeec
Confidence 99874211000 0 1112 79999883
Q ss_pred --ChHHHHHHHHHHHHHHHHH
Q psy13922 486 --QPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 486 --~~~~i~~~~~~l~~~~~~~ 504 (509)
+++++++++++|++++++.
T Consensus 367 ~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 367 GFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp TCCHHHHHHHHHHHHHHHTCT
T ss_pred CCCHHHHHHHHHHHHHHHhcc
Confidence 7999999999999887543
No 162
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.93 E-value=1e-24 Score=228.10 Aligned_cols=321 Identities=10% Similarity=0.084 Sum_probs=196.6
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh--------
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-------- 97 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-------- 97 (509)
-|+.+++++.+++....... ..| +.....++++.+++++ | .++|++|+|+++|+..+++.+.
T Consensus 82 ~~p~v~~ai~~~~~~~~~~~-~~~-~~~~~~~l~~~la~~~----g----~~~v~~~~sGseA~~~al~~a~~~~~~~~g 151 (433)
T 1z7d_A 82 CHPNILNAMINQAKNLTICS-RAF-FSVPLGICERYLTNLL----G----YDKVLMMNTGAEANETAYKLCRKWGYEVKK 151 (433)
T ss_dssp TCHHHHHHHHHHHTTCSCCC-TTS-EEHHHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHhCCCcc-CCc-CCHHHHHHHHHHHhhc----C----CCeEEEeCCHHHHHHHHHHHHHHHhhhccC
Confidence 46899999999998732111 113 2223345566666554 3 5799999999999999999865
Q ss_pred -cCCCCCCCeEEEcCCCChhHHHH-HHhcC------------CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEE
Q psy13922 98 -EDVDGKKPGVLIPIPQYPLYSAS-LAEFN------------MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIV 163 (509)
Q Consensus 98 -~~gd~~~~~Vlv~~p~y~~~~~~-~~~~g------------~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~iv 163 (509)
.+| ++.|+++.|+|+++... +...| ..+..+|. .|++.|++.++.. ++++|+
T Consensus 152 ~~~g---r~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~~----~~~~vi 217 (433)
T 1z7d_A 152 IPEN---MAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELKDP----NVCAFI 217 (433)
T ss_dssp CCTT---CCEEEEETTC--------------------------CEEEECT-------TCHHHHHHHHTST----TEEEEE
T ss_pred CCCC---CCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCCC----CEEEEE
Confidence 234 23999999999987543 33223 23333332 2899999999521 678877
Q ss_pred EeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 164 IINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 164 i~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
++..+|++|. .++++++++|.++|++||+++|+||+|.+|...+. ...+... +.. .+++ |+||.+ |
T Consensus 218 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~--~~~~~~~--~~~-----~di~---t~sK~l-~ 284 (433)
T 1z7d_A 218 VEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK--LLCVHHY--NVK-----PDVI---LLGKAL-S 284 (433)
T ss_dssp ECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGGG--TCC-----CSEE---EECGGG-G
T ss_pred EECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc--chhhHhc--CCC-----CCEE---EECccc-c
Confidence 7666778997 47889999999999999999999999998765432 2111111 111 1233 889999 6
Q ss_pred CCC-CeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhccc
Q psy13922 243 ECG-LRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVV 320 (509)
Q Consensus 243 ~~G-lr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 320 (509)
+| +|+||++ .++++++.+..... ...+.+.+++++ +.+++..+.
T Consensus 285 -~G~~~~G~v~---~~~~~~~~l~~~~~~~t~~~~~~~~aa------------------------------a~aal~~~~ 330 (433)
T 1z7d_A 285 -GGHYPISAVL---ANDDIMLVIKPGEHGSTYGGNPLAASI------------------------------CVEALNVLI 330 (433)
T ss_dssp -TTSSCCEEEE---ECHHHHTTCCTTCCCCTTTTCHHHHHH------------------------------HHHHHHHHH
T ss_pred -CCCCCeEEEE---ECHHHHhhhccccccccCCCCHHHHHH------------------------------HHHHHHHHH
Confidence 89 9999998 68888877654221 223444442111 222222211
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHH
Q psy13922 321 NPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSI----EGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVL 396 (509)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (509)
.+.+.+.++++.+++.+.|+++ |.+...++. |.++|+++.-. + .+...
T Consensus 331 ----------------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~-g~~~~i~~~~~----------~-~~~~~ 382 (433)
T 1z7d_A 331 ----------------NEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGK-GLLCAIEFKNE----------L-VNVLD 382 (433)
T ss_dssp ----------------HTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEE-TTEEEEEECTT----------T-CCHHH
T ss_pred ----------------hccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEee-eeEEEEEEccC----------h-hHHHH
Confidence 0134455566666666666543 322223343 45566666411 0 12344
Q ss_pred HHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCc
Q psy13922 397 YAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGT 476 (509)
Q Consensus 397 ~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (509)
+... |.++||.+.|+. .+
T Consensus 383 ~~~~-l~~~Gv~v~~~~----------------------------------------------------~~--------- 400 (433)
T 1z7d_A 383 ICLK-LKENGLITRDVH----------------------------------------------------DK--------- 400 (433)
T ss_dssp HHHH-HHHTTEECCEET----------------------------------------------------TT---------
T ss_pred HHHH-HHHCCeEEecCC----------------------------------------------------CC---------
Confidence 4444 446799998741 12
Q ss_pred eeEEEEee--cChHHHHHHHHHHHHHHHHHHhhc
Q psy13922 477 YHFRTTIL--PQPEKLKAMLEKFREFHEEFLAKY 508 (509)
Q Consensus 477 ~~~Rls~~--~~~~~i~~~~~~l~~~~~~~~~~~ 508 (509)
++|+++. .+++++++++++|+++++++.+||
T Consensus 401 -~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~~ 433 (433)
T 1z7d_A 401 -TIRLTPPLCITKEQLDECTEIIVKTVKFFDERF 433 (433)
T ss_dssp -EEEECCCTTCCHHHHHHHHHHHHHHHHHHC---
T ss_pred -EEEEECCcCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 8999765 799999999999999998887765
No 163
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.93 E-value=3.9e-25 Score=232.38 Aligned_cols=224 Identities=14% Similarity=0.079 Sum_probs=146.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-CCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-DVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~~~~ 105 (509)
|+.+++++.+++.+. .+|....+..+.+.++++.+.+.++.. ..++|++|+|+++|+..+++.++. ++ ++
T Consensus 79 ~p~v~~A~~~~~~~~-----~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~g---~~ 149 (451)
T 3oks_A 79 APKVVEAVRSQVGDF-----THTCFMVTPYEGYVAVCEQLNRLTPVR-GDKRSALFNSGSEAVENAVKIARSHTH---KP 149 (451)
T ss_dssp CHHHHHHHHHHHTTC-----SCCTTTTSCCHHHHHHHHHHHHHSSCC-SSEEEEEESSHHHHHHHHHHHHHHHHC---CC
T ss_pred CHHHHHHHHHHHHhc-----ccccCCccCCHHHHHHHHHHHHhCCcC-CCCEEEEeCcHHHHHHHHHHHHHHhcC---CC
Confidence 789999999999872 224444455667777777776665421 357899999999999999988765 33 23
Q ss_pred eEEEcCCCChhHHHHHHhcCC--------------EEEEEecCCCCCC---CC--------CHHHHHHHHHhhhccCCce
Q psy13922 106 GVLIPIPQYPLYSASLAEFNM--------------EQIGYYLDESKQW---GL--------PISELERSITEARKHCNPR 160 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~--------------~~~~v~~~~~~~~---~~--------d~~~L~~~i~~~~~~~~~~ 160 (509)
.|++..++|+++...+...+. .+..++....... +. +++.+++.+++.... +..
T Consensus 150 ~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 228 (451)
T 3oks_A 150 AVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGA-DNL 228 (451)
T ss_dssp EEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCG-GGE
T ss_pred eEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCC-CCE
Confidence 899999999987766554422 3444444310000 11 245555555532111 234
Q ss_pred EEEEeCCCCCCC-C-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 161 AIVIINPGNPTG-Q-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 161 ~ivi~~p~NPtG-~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
+++++.|.|++| . ..+++++++|.++|++||+++|+||+|.+|.+.+. ..+.... ++.+ ++ .||||
T Consensus 229 aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~~~--~~~p-----di---~t~sK 296 (451)
T 3oks_A 229 AAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA--MFACEHE--GIDP-----DL---IVTAK 296 (451)
T ss_dssp EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGGG--TCCC-----SE---EEECG
T ss_pred EEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc--chhhhhc--CCCC-----Ce---eeehh
Confidence 455555655555 3 55778899999999999999999999998876542 2222111 1111 13 38899
Q ss_pred ccCCCCCCeeEEEeeecCCHHHHHHHHHhhh-cccCcchh
Q psy13922 239 GYMGECGLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVL 277 (509)
Q Consensus 239 ~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~ 277 (509)
.+ | +|+|+||++ +++++++.+..... .+++.+.+
T Consensus 297 ~l-~-~G~~iG~v~---~~~~~~~~~~~~~~~~t~~~~~~ 331 (451)
T 3oks_A 297 GI-A-GGLPLSAVT---GRAEIMDSPHVSGLGGTYGGNPI 331 (451)
T ss_dssp GG-G-TTSSCEEEE---EEHHHHTCSCTTSBCCSSSSCHH
T ss_pred hh-h-CCcceEEEE---ECHHHHhhhcCCCcCCCCCCCHH
Confidence 99 5 599999998 78999888765433 34455665
No 164
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.93 E-value=1e-24 Score=225.91 Aligned_cols=335 Identities=12% Similarity=0.085 Sum_probs=209.7
Q ss_pred CCCCHHHHHHHHHHHhcccCCCcc--cCC--CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh--
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQSVG--SYT--DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-- 97 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~~~--~Y~--~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-- 97 (509)
+..|+.+++++.+.+......... .|+ ......++++.+++++ | .++++|++|+|+++++..+++.+.
T Consensus 38 ~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~al~~al~~~~~~ 111 (416)
T 1qz9_A 38 GARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLI----G--ARDGEVVVTDTTSINLFKVLSAALRV 111 (416)
T ss_dssp CCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTT----T--CCTTSEEECSCHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHc----C--CCcccEEEeCChhHHHHHHHHhhccc
Confidence 345788999999998762111111 121 1234456666666665 4 457899999999999998888876
Q ss_pred ----cCCCCCCCe-EEEcCCCChhHHHHH----Hhc--CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeC
Q psy13922 98 ----EDVDGKKPG-VLIPIPQYPLYSASL----AEF--NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN 166 (509)
Q Consensus 98 ----~~gd~~~~~-Vlv~~p~y~~~~~~~----~~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~ 166 (509)
++|| . |+++.++|..+...+ +.. |++++.++. ++.|++.+++ ++++|++++
T Consensus 112 ~~~~~~gd----~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~-----~~~~v~~~~ 173 (416)
T 1qz9_A 112 QATRSPER----RVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQ-----DTAVVMLTH 173 (416)
T ss_dssp HHHHSTTC----CEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCST-----TEEEEEEES
T ss_pred ccccCCCC----cEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCC-----CceEEEEec
Confidence 7776 6 455556777655433 233 999988875 6788888865 799999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCC
Q psy13922 167 PGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGL 246 (509)
Q Consensus 167 p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Gl 246 (509)
|+||||.+++ +++|.++|+++|+++|+|++|.... ...++... +. .+++.|+||.+. +|.
T Consensus 174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~-----~~~~~~~~----~~------d~~~~s~~K~l~--~g~ 233 (416)
T 1qz9_A 174 VNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA-----VPVDLHQA----GA------DYAIGCTYKYLN--GGP 233 (416)
T ss_dssp BCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT-----SCCCHHHH----TC------SEEEECSSSTTC--CCT
T ss_pred cccCcccccC---HHHHHHHHHHcCCEEEEEccccccC-----cCCChhhc----CC------CEEEecCcccCC--CCC
Confidence 9999999988 8999999999999999999997421 12233222 11 355669999983 677
Q ss_pred ee-EEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCC
Q psy13922 247 RG-GYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQP 325 (509)
Q Consensus 247 r~-G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 325 (509)
++ |+++ .++++++.+......+.+.... . .. +..+. .......+..++....++.++..+++
T Consensus 234 ~~~g~l~---~~~~~~~~l~~~~~g~~g~~~~--~---~~--~~~~~---~~~~~~~~~~~~~~~~~~~a~~~al~---- 296 (416)
T 1qz9_A 234 GSQAFVW---VSPQLCDLVPQPLSGWFGHSRQ--F---AM--EPRYE---PSNGIARYLCGTQPITSLAMVECGLD---- 296 (416)
T ss_dssp TCCCEEE---ECTTTTTTSCCSCCCGGGBCTT--S---CC--CSSCC---BCSSGGGGCCSCCCHHHHHHHHHHHH----
T ss_pred CCeEEEE---ECHHHHhccCCCccccCccccc--c---CC--CCccC---CCcchHHhcCCCCCHHHHHHHHHHHH----
Confidence 87 9998 5777766554321111000000 0 00 00000 00000001111111112222222221
Q ss_pred CCCchHHHH-HHHHHHHHHHHHHHHHHHHHHhcC-C--CCeeccCC----ceeEEeecCCCCHHHHHHHhhcCCCCcHHH
Q psy13922 326 GEPSYEQFS-REKQSVLDSLKQRAKMVADTFNSI-E--GMSCNPVQ----GAMYAFPQMKLPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 326 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (509)
... .+++++++.++++++++.+.|+++ | |+.+..+. .+.++|+++. +...+
T Consensus 297 ------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------------~~~~l 355 (416)
T 1qz9_A 297 ------VFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP---------------EGYAV 355 (416)
T ss_dssp ------HHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT---------------THHHH
T ss_pred ------HHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC---------------CHHHH
Confidence 111 126778888999999999999885 6 78877653 2445676654 12333
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
.+.|.++||.+.. .+.+
T Consensus 356 -~~~l~~~gi~~~~------------------------------------------------------~~~~-------- 372 (416)
T 1qz9_A 356 -IQALIDRGVIGDY------------------------------------------------------REPR-------- 372 (416)
T ss_dssp -HHHHHTTTEECEE------------------------------------------------------ETTT--------
T ss_pred -HHHHHhCCcEecc------------------------------------------------------CCCC--------
Confidence 4555577998642 1112
Q ss_pred eEEEEee---cChHHHHHHHHHHHHHHHH
Q psy13922 478 HFRTTIL---PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 478 ~~Rls~~---~~~~~i~~~~~~l~~~~~~ 503 (509)
++|+++. ++++++++++++|++++++
T Consensus 373 ~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 373 IMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp EEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 8999986 5999999999999999875
No 165
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.93 E-value=6.4e-25 Score=232.31 Aligned_cols=340 Identities=13% Similarity=0.105 Sum_probs=219.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
||.|++++.+++.+. .+ |....+..+.++++++++.+.++ ...++|++++|+++|+..+++.++.. |+.
T Consensus 72 ~p~v~~A~~~~l~~~---~~--~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~ 144 (476)
T 3i5t_A 72 RREIVDAMAHQAMVL---PY--ASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRP 144 (476)
T ss_dssp CHHHHHHHHHHHHHC---CC--CCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhc---cC--cccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 799999999999872 21 11113456788888888887765 34569999999999999999998652 222
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC---------------EEEEEecCCCCCCCCC--------HHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM---------------EQIGYYLDESKQWGLP--------ISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~---------------~~~~v~~~~~~~~~~d--------~~~L~~~i~~~~~~~~~ 159 (509)
+++.|++..|+|+++...+...+. ..+.+|..... +..| ++.|++.++.... .++
T Consensus 145 ~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~le~~i~~~~~-~~~ 222 (476)
T 3i5t_A 145 QKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLDDLVQEFEDRIESLGP-DTI 222 (476)
T ss_dssp TCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHHHHHHHHHHHHHHHCG-GGE
T ss_pred CCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHHHHHHHHHHHHHhcCC-CCE
Confidence 345899999999998766554432 12222221111 1222 7889888874211 157
Q ss_pred eEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 160 RAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 160 ~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
++|+++.++|++|. +++++++++|.++|++||+++|+||+|.+|...+. ..+.... .++.+ +++ ++||
T Consensus 223 aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~--~~~~~~~-~~v~p-----di~---t~sK 291 (476)
T 3i5t_A 223 AAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGE--WFASEKV-FGVVP-----DII---TFAK 291 (476)
T ss_dssp EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SCHHHHT-TCCCC-----SEE---EECG
T ss_pred EEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccC--ceeeecc-cCCCc-----chh---hhhh
Confidence 88888888888886 88999999999999999999999999999876642 2232211 11111 233 6799
Q ss_pred ccCCCCC-CeeEEEeeecCCHHHHHHHHHhh--------hcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCc
Q psy13922 239 GYMGECG-LRGGYSEVINLDPGVKAMLHKSI--------SAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQ 309 (509)
Q Consensus 239 ~~~G~~G-lr~G~v~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (509)
.+ | .| +|+|+++ +++++++.+.... ..+++.+.+++++
T Consensus 292 ~l-~-~G~~plg~v~---~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aA---------------------------- 338 (476)
T 3i5t_A 292 GV-T-SGYVPLGGLA---ISEAVLARISGENAKGSWFTNGYTYSNQPVACAA---------------------------- 338 (476)
T ss_dssp GG-G-TTSSCCEEEE---ECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHH----------------------------
T ss_pred hh-c-CCCcCeEEEE---ECHHHHHHHhcCCcccccccccCCCCcCHHHHHH----------------------------
Confidence 99 5 69 9999998 7999999887531 1334455552222
Q ss_pred ccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeeccCCceeEEeecCCCCHHHHHHH
Q psy13922 310 SVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSI---EGMSCNPVQGAMYAFPQMKLPAKAIAKA 386 (509)
Q Consensus 310 ~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 386 (509)
+.+++..+. -+.+.+.++++.+++.+.|+.+ |.+..+.+.|.++ ++++.......
T Consensus 339 --a~aaL~~~~----------------~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~~~-~i~~~~~~~~~--- 396 (476)
T 3i5t_A 339 --ALANIELME----------------REGIVDQAREMADYFAAALASLRDLPGVAETRSVGLVG-CVQCLLDPTRA--- 396 (476)
T ss_dssp --HHHHHHHHH----------------HTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEE-EEEECCC-------
T ss_pred --HHHHHHHHH----------------hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCcee-EEEEecCcccc---
Confidence 223322211 1334555666666666666653 4444555666554 44443211000
Q ss_pred hhcCCC----CcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccc
Q psy13922 387 KAEGKC----PSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGI 462 (509)
Q Consensus 387 ~~~g~~----~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (509)
.... ....+ ...|.++||.++|.
T Consensus 397 --~~~~~~~~~~~~~-~~~l~~~Gv~v~~~-------------------------------------------------- 423 (476)
T 3i5t_A 397 --DGTAEDKAFTLKI-DERCFELGLIVRPL-------------------------------------------------- 423 (476)
T ss_dssp ---CCHHHHHHHHHH-HHHHHHTTEECEEE--------------------------------------------------
T ss_pred --ccccchhHHHHHH-HHHHHHCCCEEEec--------------------------------------------------
Confidence 0000 02233 34455679999862
Q ss_pred cccCCCCCCCCCCceeEEEE--eecChHHHHHHHHHHHHHHHHHHhh
Q psy13922 463 CIVPGAGFGQVPGTYHFRTT--ILPQPEKLKAMLEKFREFHEEFLAK 507 (509)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Rls--~~~~~~~i~~~~~~l~~~~~~~~~~ 507 (509)
| + ++||+ ++.++++|++++++|+++++++.++
T Consensus 424 ----g-~--------~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 424 ----G-D--------LCVISPPLIISRAQIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp ----T-T--------EEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----C-C--------EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2 89999 6799999999999999999887665
No 166
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.93 E-value=1e-24 Score=224.38 Aligned_cols=299 Identities=16% Similarity=0.133 Sum_probs=203.0
Q ss_pred CCCCCCCHHHHHHHHHHHhcccCCCcccCC-CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hc
Q psy13922 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYT-DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IE 98 (509)
Q Consensus 21 ~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~-~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~ 98 (509)
++.|.+|+.+++++.+.+.. +. |+ +..+..++|++++++++ .+++++++|+++++..++..+ .+
T Consensus 29 ~~~p~~~~~~~~a~~~~~~~---~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~al~~~l~~~~~~ 94 (391)
T 3dr4_A 29 VAAPRLDGNERDYVLECMDT---TW---ISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTTALHLALVAMGIG 94 (391)
T ss_dssp CCCCCCCSSHHHHHHHHHHH---TC---CSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHTCC
T ss_pred cCCCCCCHHHHHHHHHHHHc---CC---ccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCC
Confidence 37888999999999998877 22 55 67888999999999993 237899999999999999999 88
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHH
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKE 178 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~ 178 (509)
+|| .|+++.|+|.++...++..|++++.++.+++ ++.+|++.|++.+++ ++++|+ |+||||...+
T Consensus 95 ~gd----~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~~~~-----~~~~v~---~~n~tG~~~~-- 159 (391)
T 3dr4_A 95 PGD----EVIVPSLTYIASANSVTYCGATPVLVDNDPR-TFNLDAAKLEALITP-----RTKAIM---PVHLYGQICD-- 159 (391)
T ss_dssp TTC----EEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGSGGGCCT-----TEEEEC---CBCGGGCCCC--
T ss_pred CcC----EEEECCCchHHHHHHHHHCCCEEEEEecCcc-ccCcCHHHHHHhcCC-----CceEEE---EECCCCChhh--
Confidence 888 9999999999999999999999999998754 478899999998876 788877 5789999866
Q ss_pred HHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc--cccCCCCCCeeEEEeeecC
Q psy13922 179 NIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS--KGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 179 ~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~G~~Glr~G~v~~~~~ 256 (509)
+++|.++|+++|+++|+|++|.......+.....+ . -+.+.||| |.+ +|.++|+++. .
T Consensus 160 -~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~-------------~-di~~~S~s~~K~l---~~g~gg~~~~--~ 219 (391)
T 3dr4_A 160 -MDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSL-------------G-DCATFSFFGNAII---TTGEGGMITT--N 219 (391)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-------------S-SEEEEECBTTSSS---CCBSCEEEEE--S
T ss_pred -HHHHHHHHHHcCCEEEEECcccccceECCeeeccc-------------C-CEEEEECCCCCcC---CcCCeEEEEE--C
Confidence 88899999999999999999986443211111000 0 14455766 776 3457888864 6
Q ss_pred CHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 257 DPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 257 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
++.+.+.+............. . ......++ .....+..++. ....+.
T Consensus 220 ~~~~~~~~~~~~~~g~~~~~~---~---~~~~~g~~------------------~~~~~l~aa~~---------~~~~~~ 266 (391)
T 3dr4_A 220 DDDLAAKMRLLRGQGMDPNRR---Y---WFPIVGFN------------------YRMTNIQAAIG---------LAQLER 266 (391)
T ss_dssp CHHHHHHHHHHHBTTCCTTST---T---CCSSCCCB------------------CBCCHHHHHHH---------HHHHHT
T ss_pred CHHHHHHHHHHHhcCCCCCCc---c---cccccccc------------------cCCCHHHHHHH---------HHHHHH
Confidence 778888887665421110000 0 00000000 01111111110 111223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeccC------Ccee-EEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE
Q psy13922 337 KQSVLDSLKQRAKMVADTFNSIEGMSCNPV------QGAM-YAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI 409 (509)
Q Consensus 337 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~------~~g~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v 409 (509)
+++..+..+++.+.+.+.|.++ ++.+..+ ..++ .+++.+.-. .+. +... +...|.++||.+
T Consensus 267 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~---------~~~-~~~~-l~~~L~~~GI~v 334 (391)
T 3dr4_A 267 VDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEG---------LST-TRDQ-VIKDLDALGIES 334 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSS---------CSS-CHHH-HHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCc---------cch-hHHH-HHHHHHHCCCce
Confidence 5667778888888999999988 8776544 1222 234333310 011 2333 455666779999
Q ss_pred ecCC
Q psy13922 410 VPGA 413 (509)
Q Consensus 410 ~pg~ 413 (509)
++|.
T Consensus 335 ~~~~ 338 (391)
T 3dr4_A 335 RPVF 338 (391)
T ss_dssp EECC
T ss_pred eecC
Confidence 9875
No 167
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.93 E-value=9.1e-25 Score=231.08 Aligned_cols=347 Identities=14% Similarity=0.122 Sum_probs=222.6
Q ss_pred CCCHHHHHHHHHHHhcccCCCcccCCC---CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh----h
Q psy13922 25 RFPDDVKQRAQAVLDGCRGQSVGSYTD---SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL----I 97 (509)
Q Consensus 25 ~~p~~v~~a~~~~l~~~~~~~~~~Y~~---~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l----~ 97 (509)
...+.+.+++.+.+. .++.|.+ ..|..++++++++++.+.+|.+. .+++|+|+++++..++.++ .
T Consensus 77 ~~~p~v~~~~~~~~~-----~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a~~~al~~~~~~~~ 148 (474)
T 1wyu_B 77 KYNPKLHEEAARLFA-----DLHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAAGAHGELTGILIIRAYHE 148 (474)
T ss_dssp CCCCHHHHHHHHTTS-----SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH-----hcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChHHHHHHHHHHHHHHHHHH
Confidence 344566666655422 2344554 67888999999999988888542 4778899999998866555 3
Q ss_pred cCCC-CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCC
Q psy13922 98 EDVD-GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLT 176 (509)
Q Consensus 98 ~~gd-~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s 176 (509)
++|| .+++.|+++.|+|..+...++..|++++.++.+++ +.+|++.|++.+++ ++++|++++| ||+|.+.
T Consensus 149 ~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~--~~~d~~~L~~~i~~-----~t~~v~~~~p-n~~G~~~- 219 (474)
T 1wyu_B 149 DRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPE--GEVDLEALKRELGP-----HVAALMLTNP-NTLGLFE- 219 (474)
T ss_dssp HTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTT--SSBCHHHHHHHCST-----TEEEEEECSS-CTTSCCC-
T ss_pred hcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCC--CCcCHHHHHHhhCC-----CceEEEEECC-CCCcccC-
Confidence 4665 45669999999999999999999999999998753 68899999999976 7999999998 6899873
Q ss_pred HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC-C---CeeEEEe
Q psy13922 177 KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC-G---LRGGYSE 252 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~-G---lr~G~v~ 252 (509)
+++++|+++|+++|+++|+|++|..+.++ ..+...+ +. .+++.|+||.+ |.| | .|+||++
T Consensus 220 -~~l~~i~~l~~~~g~~li~Dea~~~~~~g----~~~~~~~----g~------di~~~s~~K~~-~~p~g~gG~~~G~~~ 283 (474)
T 1wyu_B 220 -RRILEISRLCKEAGVQLYYDGANLNAIMG----WARPGDM----GF------DVVHLNLHKTF-TVPHGGGGPGSGPVG 283 (474)
T ss_dssp -TTHHHHHHHHHHHTCEEEEEGGGGGGTTT----TCCHHHH----TC------SEEECCTTTTT-CCCCTTSCCCCCCEE
T ss_pred -CCHHHHHHHHHHcCCEEEEeCchhhhhcc----CCCcccC----CC------cEEEEeCcccc-ccCCCCCCCCeEEEE
Confidence 45999999999999999999999876542 1122222 11 34456999999 556 4 5999998
Q ss_pred eecCCHHHHHHHHH-hhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchH
Q psy13922 253 VINLDPGVKAMLHK-SISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYE 331 (509)
Q Consensus 253 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 331 (509)
.++++++.+.. ... ..+..........+-.. ++. .+..+..++.+....+. .
T Consensus 284 ---~~~~l~~~l~~~~~~-~~g~~~~~~~~~~~~~~--~~~------------~~~~~~~~~~aa~~~l~---------~ 336 (474)
T 1wyu_B 284 ---VKAHLAPYLPVPLVE-RGEEGFYLDFDRPKSIG--RVR------------SFYGNFLALVRAWAYIR---------T 336 (474)
T ss_dssp ---ECGGGGGGCCSCEEE-ECSSCEEEECCCTTCCC--CSS------------STTSCHHHHHHHHHHHH---------H
T ss_pred ---EcHHHHHhCCCCeee-ccCCeeEecccCcccCc--ccc------------cCcCcHHHHHHHHHHHH---------H
Confidence 56676655431 100 00000000000000000 000 00000001221111111 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeE-EeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 332 QFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMY-AFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
...++++++.+.+.++++++.+.|+++ |+++..+...+. .|+++. . +. +..++..+++ ++||.+
T Consensus 337 ~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--~---------~~-~~~~l~~~L~-~~Gi~~- 401 (474)
T 1wyu_B 337 LGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQPP--E---------GF-RALDLAKGLL-ELGFHP- 401 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBCS--T---------TC-CHHHHHHHHH-HTTCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEcC--C---------CC-CHHHHHHHHH-HCCccc-
Confidence 112346777889999999999999988 887643332221 454442 1 22 3445455555 559974
Q ss_pred cCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEeec--ChH
Q psy13922 411 PGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTILP--QPE 488 (509)
Q Consensus 411 pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~~--~~~ 488 (509)
|+..|.. ...+ ++|++++. +++
T Consensus 402 ~~~~~~~------------------------------------------------~~~~--------~lRis~~~~~t~e 425 (474)
T 1wyu_B 402 PTVYFPL------------------------------------------------IVKE--------ALMVEPTETEAKE 425 (474)
T ss_dssp CEESCST------------------------------------------------TSTT--------CEEECCCTTSCHH
T ss_pred ccccccc------------------------------------------------ccCC--------EEEEEeecCCCHH
Confidence 5544432 1112 89999994 899
Q ss_pred HHHHHHHHHHHHHH
Q psy13922 489 KLKAMLEKFREFHE 502 (509)
Q Consensus 489 ~i~~~~~~l~~~~~ 502 (509)
++++++++|+++++
T Consensus 426 ~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 426 TLEAFAEAMGALLK 439 (474)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998874
No 168
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.93 E-value=1.5e-24 Score=229.83 Aligned_cols=335 Identities=13% Similarity=0.084 Sum_probs=225.9
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCC---cccCCCCcchHHHHHHHHHHHhhhcCCCCCC--CcEEEeCCHHHHHHHHHHHh
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQS---VGSYTDSPGIEIIRRHVAQYISRRDGQPADW--QDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~---~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l 96 (509)
+.+..|+.|++++.+.+...-... ...|+...+..++++.+.+++.+.+|.+.+. .+|++++|+ +++..++.++
T Consensus 52 ~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~al 130 (483)
T 1rv3_A 52 SENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTAL 130 (483)
T ss_dssp TCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHh
Confidence 566679999999988887521000 0125555566788888888888888865322 358888888 8888889999
Q ss_pred hcCCCCCCCeEEEcCCCChhHHHH--------HHhcC--CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeC
Q psy13922 97 IEDVDGKKPGVLIPIPQYPLYSAS--------LAEFN--MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN 166 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~~~~~--------~~~~g--~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~ 166 (509)
+++|| +|+++.|.|.++... +...| .++++++.+++ ++.+|++.|++.+++. ++++|++ +
T Consensus 131 l~pGD----~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~-~~~iD~d~le~~i~~~----~tklIi~-~ 200 (483)
T 1rv3_A 131 VEPHG----RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD-TGYIDYDRLEENARLF----HPKLIIA-G 200 (483)
T ss_dssp TCTTC----EEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT-TCSBCHHHHHHHHHHH----CCSEEEE-C
T ss_pred cCCCC----EEEEecCccCcCcchhhhhcccCcccccceEEEEECccccC-CCcCCHHHHHHHHhhc----CCcEEEE-e
Confidence 99999 999999988876532 22334 56666655643 4789999999999843 8999999 8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCc-ccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 167 PGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQD-NVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 167 p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
++||+ .+++ +++|.++|+++|+++|+|++|.. +.+.+ ....++ + .. .+++.|+||++ .|
T Consensus 201 ~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~-~~~~p~----~-------~~-div~~s~~K~l---~G 260 (483)
T 1rv3_A 201 TSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAG-VVPSPF----E-------HC-HVVTTTTHKTL---RG 260 (483)
T ss_dssp CSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHT-SSCCGG----G-------TC-SEEEEESSGGG---CC
T ss_pred CCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccC-CCCCCC----C-------CC-cEEEecCcccC---CC
Confidence 99998 7776 89999999999999999999863 33222 111111 1 11 24567999987 47
Q ss_pred CeeEEEeeecCCH--------------HHHHHHHHhhhc--ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCc
Q psy13922 246 LRGGYSEVINLDP--------------GVKAMLHKSISA--MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQ 309 (509)
Q Consensus 246 lr~G~v~~~~~~~--------------~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (509)
.|+||+++ .++ ++...+...... .++++..
T Consensus 261 prgG~i~~--~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~-------------------------------- 306 (483)
T 1rv3_A 261 CRAGMIFY--RRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNH-------------------------------- 306 (483)
T ss_dssp CSCEEEEE--ECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHH--------------------------------
T ss_pred CCceEEEE--cchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHH--------------------------------
Confidence 78899984 332 233333322111 1122222
Q ss_pred ccccchhhcccCCCCCCCCchHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCC-ceeEEeecCCCCHHHHHHHh
Q psy13922 310 SVGQTVMDCVVNPPQPGEPSYEQF-SREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQ-GAMYAFPQMKLPAKAIAKAK 387 (509)
Q Consensus 310 ~~~~~al~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 387 (509)
..+++..++. .. ..+++++++.+.++++++.+.|.++ |+++..+. +++++|+++..
T Consensus 307 --~iaal~~Al~----------~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~--------- 364 (483)
T 1rv3_A 307 --AIAGVAVALK----------QAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRS--------- 364 (483)
T ss_dssp --HHHHHHHHHH----------HHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGG---------
T ss_pred --HHHHHHHHHH----------HHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccC---------
Confidence 2223322221 11 1236778888999999999999998 88887653 45677877751
Q ss_pred hcCCCCcHHHHHHHHhhcCeEEe----cCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhccccc
Q psy13922 388 AEGKCPSVLYAFELLERTGICIV----PGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGIC 463 (509)
Q Consensus 388 ~~g~~~~~~~~~~ll~~~gI~v~----pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (509)
.|+ +... +..+|++.||.+. ||..+.
T Consensus 365 -~g~-~~~~-~~~~L~~~gI~v~~~~~pg~~~~----------------------------------------------- 394 (483)
T 1rv3_A 365 -KGT-DGGR-AEKVLEACSIACNKNTCPGDKSA----------------------------------------------- 394 (483)
T ss_dssp -GTC-CHHH-HHHHHHHTTEECEEECCSSCSCT-----------------------------------------------
T ss_pred -CCC-CHHH-HHHHHHhCCcEEecCCCCCCCcC-----------------------------------------------
Confidence 132 2333 5677888999999 776321
Q ss_pred ccCCCCCCCCCCceeEEEEee--cC----hHHHHHHHHHHHHHHHH
Q psy13922 464 IVPGAGFGQVPGTYHFRTTIL--PQ----PEKLKAMLEKFREFHEE 503 (509)
Q Consensus 464 ~~~~~~~~~~~~~~~~Rls~~--~~----~~~i~~~~~~l~~~~~~ 503 (509)
.+.+ ++||++. ++ ++++++++++|.++++.
T Consensus 395 --~~~~--------~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 395 --LRPS--------GLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp --TSCC--------EEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred --CCCc--------eEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 1222 8999988 35 89999999999998875
No 169
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.93 E-value=9.2e-25 Score=226.27 Aligned_cols=300 Identities=15% Similarity=0.101 Sum_probs=184.8
Q ss_pred CCCCCCHHHHHHHHHHHhccc--CCC-cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCR--GQS-VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE 98 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~--~~~-~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~ 98 (509)
+.+..|+.+++++.+.+.+.. +.. ...|+.......+.+...+.+.+.+| .++++|++++| ++++..+++++++
T Consensus 38 ~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~ 114 (420)
T 3gbx_A 38 SENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQ 114 (420)
T ss_dssp TCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCC
T ss_pred cCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcC
Confidence 344468999999988885411 000 01133333333444434355555545 35556767666 7899999999999
Q ss_pred CCCCCCCeEEEcCCCChhHH---HHHHh--cCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 99 DVDGKKPGVLIPIPQYPLYS---ASLAE--FNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~---~~~~~--~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
+|| .|+++.|+|..+. ..+.. .+...+.++.+ .++.+|++.|++.+++. ++++|++++|+||+
T Consensus 115 ~gd----~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~----~~~~v~~~~~~~~~-- 182 (420)
T 3gbx_A 115 PGD----TVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEH----KPKMIIGGFSAYSG-- 182 (420)
T ss_dssp TTC----EEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHH----CCSEEEECCTTCCS--
T ss_pred CCC----EEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhc----CCeEEEEecCccCC--
Confidence 998 9999999998743 22222 34566666665 34579999999999874 69999998999974
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
..+ +++|.++|++||+++|+||+|.......+ .+..... . ..+++.|+||.+ | |.++||++
T Consensus 183 ~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~----------~-~di~~~s~sK~~-~--g~~gg~~~- 243 (420)
T 3gbx_A 183 VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAG-VYPNPVP----------H-AHVVTTTTHKTL-A--GPRGGLIL- 243 (420)
T ss_dssp CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTT-SSCCSTT----------T-SSEEEEESSGGG-C--SCSCEEEE-
T ss_pred ccC---HHHHHHHHHHcCCEEEEECCcchhceecc-cCCcccc----------c-CCEEEeecccCC-C--CCCceEEE-
Confidence 444 89999999999999999999864433222 1111100 1 136678999998 3 56679997
Q ss_pred ecCCH---HHHHHHHHhhhc--ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC
Q psy13922 254 INLDP---GVKAMLHKSISA--MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 254 ~~~~~---~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 328 (509)
.++ ++.+.+...... ..+++.. .+.++...+.
T Consensus 244 --~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~a~~~a~~------- 280 (420)
T 3gbx_A 244 --AKGGDEELYKKLNSAVFPSAQGGPLMH----------------------------------VIAGKAVALK------- 280 (420)
T ss_dssp --ESSCCHHHHHHHHHHHC----CCCCHH----------------------------------HHHHHHHHHH-------
T ss_pred --EcCCcHHHHHHhhhhcCCCCCCCcchh----------------------------------HHHHHHHHHH-------
Confidence 455 788777654432 1223232 1222221110
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC-CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCe
Q psy13922 329 SYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPV-QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGI 407 (509)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI 407 (509)
....++++++++.+.++++.+.+.|.+. |+.+..+ ..+.++|+.+..+ + .+...+...|+++||
T Consensus 281 --~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~l~~~gi 345 (420)
T 3gbx_A 281 --EAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDK----------N--LTGKEADAALGRANI 345 (420)
T ss_dssp --HTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG----------T--CCHHHHHHHHHHTTE
T ss_pred --HHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCC----------C--CCHHHHHHHHHHCCc
Confidence 0012336778888999999999999886 8887653 4566677665411 1 133335677888999
Q ss_pred EEecCC
Q psy13922 408 CIVPGA 413 (509)
Q Consensus 408 ~v~pg~ 413 (509)
.+.|+.
T Consensus 346 ~v~~~~ 351 (420)
T 3gbx_A 346 TVNKNS 351 (420)
T ss_dssp ECEEEC
T ss_pred Eecccc
Confidence 999844
No 170
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.93 E-value=3e-24 Score=226.86 Aligned_cols=214 Identities=14% Similarity=0.109 Sum_probs=147.7
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~ 102 (509)
||.|++++.+++.+.. +. |....+..+.+.++++.+.+.++ ...++|++++|+++|+..+++.++.. |.+
T Consensus 73 ~p~v~~A~~~~~~~~~---~~-~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~ 146 (472)
T 3hmu_A 73 RDELAEVAARQMRELP---YY-NTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQP 146 (472)
T ss_dssp CHHHHHHHHHHHHHCS---CC-CSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhcc---cc-ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 7999999999998832 11 33333445566666666665544 34679999999999999999998751 111
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC------------EEEEEecCC--C-CCCCCC--------HHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM------------EQIGYYLDE--S-KQWGLP--------ISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~------------~~~~v~~~~--~-~~~~~d--------~~~L~~~i~~~~~~~~~ 159 (509)
.++.||+..|+|+++...+...+. .+..++... . +.+ .| ++.|++.+++... .++
T Consensus 147 ~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~-~~~ 224 (472)
T 3hmu_A 147 EKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGE-NRV 224 (472)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG-GGE
T ss_pred CCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCC-CCE
Confidence 234899999999998766555433 233444221 0 111 34 7888888874211 156
Q ss_pred eEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 160 RAIVIINPGNPTGQV-LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 160 ~~ivi~~p~NPtG~~-~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
++|+++.++|++|.+ .+++++++|.++|++||+++|+||+|.+|...+. ....... ++.+ +++ +|||
T Consensus 225 aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~--~~a~~~~--~v~p-----di~---t~sK 292 (472)
T 3hmu_A 225 AAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGN--WFGTQTM--GIRP-----HIM---TIAK 292 (472)
T ss_dssp EEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SCHHHHH--TCCC-----SEE---EECG
T ss_pred EEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCc--cchhHHh--CCCC-----cee---eech
Confidence 777777778888875 4889999999999999999999999999876642 2222221 2222 233 6799
Q ss_pred ccCCCCCCeeEEEeeecCCHHHHHHH
Q psy13922 239 GYMGECGLRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 239 ~~~G~~Glr~G~v~~~~~~~~~~~~l 264 (509)
.+ |-.|+|+|+++ +++++++.+
T Consensus 293 ~l-~gg~~plG~v~---~~~~i~~~~ 314 (472)
T 3hmu_A 293 GL-SSGYAPIGGSI---VCDEVAHVI 314 (472)
T ss_dssp GG-TTTSSCCEEEE---EEHHHHHHH
T ss_pred hh-hcCCcceEEEE---ECHHHHHhc
Confidence 99 53449999998 799999988
No 171
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.93 E-value=8.9e-25 Score=230.38 Aligned_cols=350 Identities=10% Similarity=0.031 Sum_probs=219.8
Q ss_pred CHHHHHHHHHHHhcccC----CCcccCCC-CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCC
Q psy13922 27 PDDVKQRAQAVLDGCRG----QSVGSYTD-SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~----~~~~~Y~~-~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd 101 (509)
|..+.+++.+.+..... .+...|.+ ..-..++++.+++++ | +++++|++|+|++++++.++.++.++++
T Consensus 80 p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~t~g~t~al~~~~~~~~~~~~ 153 (465)
T 3e9k_A 80 PKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV----G--ANEKEIALMNALTVNLHLLMLSFFKPTP 153 (465)
T ss_dssp ETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH----T--CCGGGEEECSCHHHHHHHHHHHHCCCCS
T ss_pred hHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc----C--CCcCCEEEECCHHHHHHHHHHHhccccC
Confidence 56677777666654210 11111222 122245777777776 4 4578999999999999999999998886
Q ss_pred CCCCeEEEcCCCChhHHH----HHHhcCCEEE----EE-ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCC
Q psy13922 102 GKKPGVLIPIPQYPLYSA----SLAEFNMEQI----GY-YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTG 172 (509)
Q Consensus 102 ~~~~~Vlv~~p~y~~~~~----~~~~~g~~~~----~v-~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG 172 (509)
++++|+++.|+|++... .++..|+++. .+ +.+ .++.+|++.|++.++++.. ++++|++++|+||||
T Consensus 154 -~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~--~~~~~d~~~l~~~i~~~~~--~~~lv~~~~~~n~tG 228 (465)
T 3e9k_A 154 -KRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPRE--GEETLRIEDILEVIEKEGD--SIAVILFSGVHFYTG 228 (465)
T ss_dssp -SSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCT--TCSSCCHHHHHHHHHHHGG--GEEEEEEESBCTTTC
T ss_pred -CCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCC--CCCccCHHHHHHHHHhcCC--CeEEEEEeCcccCcc
Confidence 55679999999998544 5666888752 22 332 3468899999999974211 689999999999999
Q ss_pred CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 173 QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 173 ~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
.+++ +++|.++|+++|+++|+|++|+.... ...+.... . .++++|++|.++|.|+ ++|+++
T Consensus 229 ~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~-----~~~~~~~~---------~-D~~~~s~~K~l~~gp~-~~g~l~ 289 (465)
T 3e9k_A 229 QHFN---IPAITKAGQAKGCYVGFDLAHAVGNV-----ELYLHDWG---------V-DFACWCSYKYLNAGAG-GIAGAF 289 (465)
T ss_dssp BBCC---HHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHHT---------C-CEEEECSSSTTCCCTT-CCCEEE
T ss_pred eeec---HHHHHHHHHHcCCEEEEEhhhhcCCc-----CCchhhcC---------C-CEEEECcccccccCCC-ceEEEE
Confidence 9988 78899999999999999999976322 22333221 1 3556799999942233 678887
Q ss_pred eecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHH
Q psy13922 253 VINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQ 332 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 332 (509)
.++++.+.+.....++.+......... .....+.. ....+..++....+..++..+++ .
T Consensus 290 ---~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~gt~~~~~~~a~~aal~----------~ 348 (465)
T 3e9k_A 290 ---IHEKHAHTIKPALVGWFGHELSTRFKM---DNKLQLIP-----GVCGFRISNPPILLVCSLHASLE----------I 348 (465)
T ss_dssp ---ECGGGTTTSCCSSCCGGGBCHHHHTTC---CSCCCBCS-----SGGGGCCSCCCHHHHHHHHHHHH----------H
T ss_pred ---EcHHHHhhcCCcccCccCCCCCccccc---CCCcCcCC-----ChHHhccCCccHHHHHHHHHHHH----------H
Confidence 577776655432222211110000000 00000000 00111222222223344443322 2
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhcC----------CCCeeccCC----ceeEEeecCCCCHHHHHHHhhcCCCCcHHH
Q psy13922 333 FSRE-KQSVLDSLKQRAKMVADTFNSI----------EGMSCNPVQ----GAMYAFPQMKLPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 333 ~~~~-~~~~~~~~~~~~~~l~~~L~~~----------~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (509)
+.++ ++++++++.++++++.+.|+++ +++++..|. .+.++|+.+.. +...
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~--------------~~~~- 413 (465)
T 3e9k_A 349 FKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV--------------PNKD- 413 (465)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC--------------TTCC-
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC--------------CHHH-
Confidence 2222 6888999999999999999884 688887654 25555655541 1122
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
+...|.++||.+.. .. ++
T Consensus 414 l~~~L~~~Gi~v~~----~~------------------------------------------------~~---------- 431 (465)
T 3e9k_A 414 VFQELEKRGVVCDK----RN------------------------------------------------PN---------- 431 (465)
T ss_dssp HHHHHHTTTEECEE----ET------------------------------------------------TT----------
T ss_pred HHHHHHHCCEEEec----CC------------------------------------------------CC----------
Confidence 34556677998862 11 23
Q ss_pred eEEEEe-e--cChHHHHHHHHHHHHHHHHH
Q psy13922 478 HFRTTI-L--PQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 478 ~~Rls~-~--~~~~~i~~~~~~l~~~~~~~ 504 (509)
++|+|+ . ++.++++++++.|++++++.
T Consensus 432 ~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 432 GIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp EEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred EEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 899997 2 79999999999999998653
No 172
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.93 E-value=1.5e-24 Score=228.34 Aligned_cols=211 Identities=11% Similarity=0.059 Sum_probs=146.0
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-------
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE------- 98 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------- 98 (509)
-+|.+.+++.+++.+......+.| +.....+|++.+++++ + ...++|++|+|+++|+..+++.++.
T Consensus 92 ~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~~L~e~la~~~----~--~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~ 164 (457)
T 3tfu_A 92 GHPALDQALTTQLRVMNHVMFGGL-THEPAARLAKLLVDIT----P--AGLDTVFFSDSGSVSVEVAAKMALQYWRGRGL 164 (457)
T ss_dssp TCHHHHHHHHHHHHHCSCCCSSSE-ECHHHHHHHHHHHHHS----S--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhccCcccccc-CCHHHHHHHHHHHHhC----C--CCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCC
Confidence 378999999999987321111222 2333345555555554 3 3456999999999999999999875
Q ss_pred CCCCCCCeEEEcCCCChhHHHHHHhcCC--------------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEE
Q psy13922 99 DVDGKKPGVLIPIPQYPLYSASLAEFNM--------------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVI 164 (509)
Q Consensus 99 ~gd~~~~~Vlv~~p~y~~~~~~~~~~g~--------------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi 164 (509)
++ ++.|++..++|+++...+...+. .+..++.........|++.|++.+++... ++++|++
T Consensus 165 ~g---~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~--~~aavi~ 239 (457)
T 3tfu_A 165 PG---KRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG--ELAAVVV 239 (457)
T ss_dssp TT---CCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGG--GEEEEEE
T ss_pred CC---CceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCC--CEEEEEE
Confidence 33 34899999999987655554421 22223322211112378999999984211 6788888
Q ss_pred eC-CCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 165 IN-PGNPTGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 165 ~~-p~NPtG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
+. ++||+|..+ +++++++|.++|++||+++|+||+|.+|...+. ..+.... +..+ +++ ||||.++
T Consensus 240 ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~--~~a~~~~--~~~p-----dii---t~sK~l~- 306 (457)
T 3tfu_A 240 EPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGA--LFAADHA--GVSP-----DIM---CVGKALT- 306 (457)
T ss_dssp CSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHHH--TCCC-----SEE---EECGGGG-
T ss_pred eCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccc--hhHhHhc--CCCc-----eEE---EEChhhh-
Confidence 87 899999865 788899999999999999999999999876542 2233222 1211 233 8899994
Q ss_pred CCC-CeeEEEeeecCCHHHHHHHH
Q psy13922 243 ECG-LRGGYSEVINLDPGVKAMLH 265 (509)
Q Consensus 243 ~~G-lr~G~v~~~~~~~~~~~~l~ 265 (509)
.| +|+||++ +++++++.+.
T Consensus 307 -gG~~~lG~v~---~~~~i~~~~~ 326 (457)
T 3tfu_A 307 -GGYLSLAATL---CTADVAHTIS 326 (457)
T ss_dssp -TTSSCCEEEE---EEHHHHHHHH
T ss_pred -CCCcceEEEE---EcHHHHHHhh
Confidence 56 7999998 7999999886
No 173
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.93 E-value=6.9e-25 Score=228.83 Aligned_cols=206 Identities=13% Similarity=0.047 Sum_probs=141.0
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVDGK 103 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~~ 103 (509)
-||.+++++.+++.+ .... |.+.....+|++.+++++ + ..++|++|+|+++++..+++.++. +++
T Consensus 70 ~~p~v~~A~~~~~~~---~~~~-~~~~~~~~~l~~~la~~~----~---~~~~v~~~~~Gsea~~~ai~~a~~~~~~~-- 136 (429)
T 3k28_A 70 ANDRVVEALKAVAER---GTSF-GAPTEIENKLAKLVIERV----P---SIEIVRMVNSGTEATMSALRLARGYTGRN-- 136 (429)
T ss_dssp SCHHHHHHHHHHHHH---CSCC-SSCCHHHHHHHHHHHHHS----T---TCSEEEEESSHHHHHHHHHHHHHHHHTCC--
T ss_pred CCHHHHHHHHHHHhh---CcCc-CCCCHHHHHHHHHHHHhC----C---CCCEEEEeCChHHHHHHHHHHHHHhhCCC--
Confidence 389999999999987 3333 334556678888888876 2 468999999999999999998865 334
Q ss_pred CCeEEEcCCCChhHHHHHHhc-CCEEEEEecCCCCCCC------------CCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 104 KPGVLIPIPQYPLYSASLAEF-NMEQIGYYLDESKQWG------------LPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~------------~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
.|++..|+|+++...+... |.....+.......+. -|++.|++.++.... ++++|+++.++|+
T Consensus 137 --~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~--~~~~vi~ep~~~~ 212 (429)
T 3k28_A 137 --KILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD--DIACVIVEPVAGN 212 (429)
T ss_dssp --EEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG--GEEEEEECSSBCT
T ss_pred --EEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC--CEEEEEEcCCCCC
Confidence 8999999998765433222 2211111111111110 179999999975311 4666666666666
Q ss_pred CCCC-CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeE
Q psy13922 171 TGQV-LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGG 249 (509)
Q Consensus 171 tG~~-~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G 249 (509)
+|.. .+++++++|.++|++||+++|+||+|.+| ..+ ....... .+..+ + +.++||.+ | +|+|+|
T Consensus 213 ~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g--~~~~~~~--~~~~~-----d---i~t~sK~~-~-~G~~iG 277 (429)
T 3k28_A 213 MGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVA--YNCGQGY--YGVTP-----D---LTCLGKVI-G-GGLPVG 277 (429)
T ss_dssp TSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSS--TTHHHHH--HTCCC-----S---EEEECGGG-G-TTSCCE
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC--cchHHHH--hCCCC-----c---eehhhhhh-c-CCCCeE
Confidence 6764 46888999999999999999999999988 543 1212211 11111 1 34789999 5 599999
Q ss_pred EEeeecCCHHHHHHHHH
Q psy13922 250 YSEVINLDPGVKAMLHK 266 (509)
Q Consensus 250 ~v~~~~~~~~~~~~l~~ 266 (509)
|++ +++++++.+..
T Consensus 278 ~~~---~~~~~~~~~~~ 291 (429)
T 3k28_A 278 AYG---GKAEIMRQVAP 291 (429)
T ss_dssp EEE---ECHHHHTTBTT
T ss_pred EEE---EcHHHHhhhcc
Confidence 998 78999888764
No 174
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=4.2e-23 Score=212.25 Aligned_cols=173 Identities=17% Similarity=0.208 Sum_probs=138.9
Q ss_pred CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----HHhcCCE
Q psy13922 52 SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----LAEFNME 127 (509)
Q Consensus 52 ~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~~~~g~~ 127 (509)
..+..+++++++++++ .+ +.|++++| ++++..+++.+.++|| .|+++.|+|.+.... ++..|.+
T Consensus 51 ~~~~~~l~~~la~~~~------~~-~~i~~~sG-t~a~~~~~~~~~~~g~----~vl~~~~~~~~~~~~~~~~~~~~g~~ 118 (386)
T 1cs1_A 51 NPTRDVVQRALAELEG------GA-GAVLTNTG-MSAIHLVTTVFLKPGD----LLVAPHDCYGGSYRLFDSLAKRGCYR 118 (386)
T ss_dssp CHHHHHHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHCCTTC----EEEEETTCCHHHHHHHHHHHTTTSCE
T ss_pred CccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHhCCCC----EEEEecCCcHhHHHHHHHHHHhcCCE
Confidence 4567899999999983 12 56666666 8999999999988888 999999999985543 3667999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccC
Q psy13922 128 QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207 (509)
Q Consensus 128 ~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~ 207 (509)
++.++.+ |++.|++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+..
T Consensus 119 ~~~~~~~-------d~~~l~~~i~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~ 183 (386)
T 1cs1_A 119 VLFVDQG-------DEQALRAALAE-----KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN 183 (386)
T ss_dssp EEEECTT-------CHHHHHHHHHT-----CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC
T ss_pred EEEeCCC-------CHHHHHHhhcc-----CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 9988753 79999999986 7999999999999999987 8999999999999999999999876531
Q ss_pred CCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-EEEeeecCCHHHHHHHHHhhhc
Q psy13922 208 GSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG-GYSEVINLDPGVKAMLHKSISA 270 (509)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~-G~v~~~~~~~~~~~~l~~~~~~ 270 (509)
++ +.+ ..+++.|+||.+ |.+|.|+ ||+++ .++++++.+......
T Consensus 184 -----~~-----~~~------~di~~~s~sK~~-~~~~~~~~G~~~~--~~~~l~~~l~~~~~~ 228 (386)
T 1cs1_A 184 -----PL-----ALG------ADLVLHSCTKYL-NGHSDVVAGVVIA--KDPDVVTELAWWANN 228 (386)
T ss_dssp -----GG-----GGT------CSEEEEETTTTT-TCSSCCCCEEEEE--SSHHHHHHHHHHHHH
T ss_pred -----cc-----ccC------ceEEEEcCcccc-cCCCCceeEEEEe--CcHHHHHHHHHHHHh
Confidence 11 111 256678999999 6788886 99873 445888888776553
No 175
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.92 E-value=1.8e-23 Score=219.74 Aligned_cols=352 Identities=13% Similarity=-0.021 Sum_probs=226.8
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC---CcEEEeCCHHHHHHHHHHHhhc-----
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW---QDVILSAGASDGIKSVLKLLIE----- 98 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~---~~i~~t~G~~~al~~~~~~l~~----- 98 (509)
++.+.+++.+++.. . ..+|....+..++++++++++.+.+|.+... ..+++|+|+++++.+++.+++.
T Consensus 55 ~~~v~e~~~~a~~~---~-~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~ 130 (452)
T 2dgk_A 55 DENVHKLMDLSINK---N-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKR 130 (452)
T ss_dssp CHHHHHHHHHTTTC---B-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcc---C-CCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 46777777777755 2 2236666788899999999998888855332 2499999999999999988864
Q ss_pred ---CCCC-CCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 99 ---DVDG-KKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 99 ---~gd~-~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
+|.+ .++.|+++. +|..+...++..|++++.++.++ .++.+|++.|++++++ ++++|++++|+||||.+
T Consensus 131 ~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~-----~t~~v~~~~~~n~tG~~ 203 (452)
T 2dgk_A 131 MEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDE-----NTIGVVPTFGVTYTGNY 203 (452)
T ss_dssp HHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCT-----TEEEEECBBSCTTTCBB
T ss_pred HHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhh-----CCEEEEEEcCCcCCccc
Confidence 4410 134899999 99999999999999999999875 2478999999999987 78999999999999999
Q ss_pred CCHHHHHHHHHHHHHC------CcEEEEcccCCcccc---cCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 175 LTKENIQDIIKFAHRE------KLFLFADEVYQDNVY---AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~------~i~lI~Deay~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
.+ +++|+++|+++ |+++++|++|..+.. .+... ..+ . ..+.++++ .|.+|. |++|
T Consensus 204 ~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-------~--~~~~d~~~-~~~hK~--~~~~ 267 (452)
T 2dgk_A 204 EF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV-WDF-------R--LPRVKSIS-ASGHKF--GLAP 267 (452)
T ss_dssp CC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC-CST-------T--STTEEEEE-EETTTT--TCCC
T ss_pred CC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch-hhc-------C--CCCCcEEE-ECcccc--cCCC
Confidence 66 88999999995 999999999998753 11100 000 0 11233454 488995 4588
Q ss_pred CeeEEEeeecCCHHHH-HHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccc-hhhcccCCC
Q psy13922 246 LRGGYSEVINLDPGVK-AMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQT-VMDCVVNPP 323 (509)
Q Consensus 246 lr~G~v~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-al~~~~~~~ 323 (509)
.++||+++ .++.++ +.+.. ...+...... . ..+-....+...+ ++. ++..+
T Consensus 268 ~~~G~~~~--~~~~~~~~~~~~-~~~~~~~~~~-~---~~~~~~r~~~~~~----------------~~~aal~~l---- 320 (452)
T 2dgk_A 268 LGCGWVIW--RDEEALPQELVF-NVDYLGGQIG-T---FAINFSRPAGQVI----------------AQYYEFLRL---- 320 (452)
T ss_dssp SSCEEEEE--SSGGGSCGGGCE-EECCTTCCEE-E---CCSCCSCBCHHHH----------------HHHHHHHHH----
T ss_pred CCeEEEEE--cCHHHHHHHhcc-CccccCCCCC-C---cccCCCChhHHHH----------------HHHHHHHHH----
Confidence 99999984 555433 33311 0111110000 0 0000000000000 111 11111
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC-----CceeEEeecCCCCHHHHHHHhhcCCCCcHHHH
Q psy13922 324 QPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPV-----QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYA 398 (509)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 398 (509)
..+.++++.+...++++++.+.|++++++++..+ ..+++.+ ++.-.. ..++ +... +
T Consensus 321 ---------g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f-~~~~~~-------~~~~-~~~~-l 381 (452)
T 2dgk_A 321 ---------GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCF-KLKDGE-------DPGY-TLYD-L 381 (452)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEE-EECTTC-------CCSC-CHHH-H
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEE-EecCcc-------cccC-CHHH-H
Confidence 1123677888899999999999999978887643 4444443 333100 0001 1134 3
Q ss_pred HHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCcee
Q psy13922 399 FELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYH 478 (509)
Q Consensus 399 ~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (509)
.+.|.+.||.+........ ..+..+
T Consensus 382 ~~~L~~~Gi~v~~~~~~~~-------------------------------------------------------~~~~~~ 406 (452)
T 2dgk_A 382 SERLRLRGWQVPAFTLGGE-------------------------------------------------------ATDIVV 406 (452)
T ss_dssp HHHHHHTTCBCCEEECSTT-------------------------------------------------------CTTCEE
T ss_pred HHHHHhcCCeeeeeeCCcc-------------------------------------------------------cCCeEE
Confidence 4555667987653111000 012238
Q ss_pred EEEEee--cChHHHHHHHHHHHHHHHHHHh
Q psy13922 479 FRTTIL--PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 479 ~Rls~~--~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
+|+++. ++.++++.+++.|+++++++.+
T Consensus 407 lRis~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 407 MRIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999998 5789999999999999877654
No 176
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.92 E-value=3.9e-24 Score=224.06 Aligned_cols=316 Identities=9% Similarity=0.087 Sum_probs=208.2
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-------
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE------- 98 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------- 98 (509)
-|+.+++++.+++....... ..|. .....++++.+++++ | .++|++|+|+++|+..+++.++.
T Consensus 93 ~~p~v~~Ai~~~~~~~~~~~-~~~~-~~~~~~l~~~la~~~----g----~~~v~~~~sGseA~~~al~~~~~~~~~~~g 162 (439)
T 2oat_A 93 CHPKIVNALKSQVDKLTLTS-RAFY-NNVLGEYEEYITKLF----N----YHKVLPMNTGVEAGETACKLARKWGYTVKG 162 (439)
T ss_dssp TCHHHHHHHHHHHTTCSCCC-TTSE-ESSHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhcCccc-CccC-CHHHHHHHHHHHHhc----C----CCEEEEeCCHHHHHHHHHHHHHHHhhhccC
Confidence 57899999999998732111 1232 223366777777766 3 57899999999999999998752
Q ss_pred --CCCCCCCeEEEcCCCChhHHH-HHHhcC------------CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEE
Q psy13922 99 --DVDGKKPGVLIPIPQYPLYSA-SLAEFN------------MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIV 163 (509)
Q Consensus 99 --~gd~~~~~Vlv~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~iv 163 (509)
+| ++.|++..|+|+++.. .+...| ..+..+|. .|++.|++.++.. ++++|+
T Consensus 163 ~~~g---~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~~----~~~~vi 228 (439)
T 2oat_A 163 IQKY---KAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALERALQDP----NVAAFM 228 (439)
T ss_dssp CCTT---CCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHHHHTTST----TEEEEE
T ss_pred CCCC---CCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHHHHhCCC----CEEEEE
Confidence 34 2399999999988654 344334 34555553 2799999998531 677777
Q ss_pred EeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 164 IINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 164 i~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
++..+|++|. .++++++++|.++|++||+++|+||+|.+|...+. ...+... ++. .+++ |+||.+ |
T Consensus 229 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~--~~~~~~~--~~~-----~Di~---t~sK~l-~ 295 (439)
T 2oat_A 229 VEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR--WLAVDYE--NVR-----PDIV---LLGKAL-S 295 (439)
T ss_dssp ECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGGG--TCC-----CSEE---EECGGG-G
T ss_pred EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc--chhHHHh--CCC-----CcEE---Eecccc-c
Confidence 7666778996 67999999999999999999999999988765542 2111111 111 1233 889999 5
Q ss_pred CCC-CeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhccc
Q psy13922 243 ECG-LRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVV 320 (509)
Q Consensus 243 ~~G-lr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 320 (509)
+| +|+||++ .++++++.+..... ...+.+.+ ++++....+
T Consensus 296 -~G~~~~G~v~---~~~~~~~~l~~~~~~~t~~~~~~----------------------------------~~aaa~aal 337 (439)
T 2oat_A 296 -GGLYPVSAVL---CDDDIMLTIKPGEHGSTYGGNPL----------------------------------GCRVAIAAL 337 (439)
T ss_dssp -TTSSCCEEEE---ECHHHHTTSCTTSSCCSSTTCHH----------------------------------HHHHHHHHH
T ss_pred -CCCCCeEEEE---ECHHHHhccCCCCcccCCCcCHH----------------------------------HHHHHHHHH
Confidence 68 9999998 68888877654221 23344444 222222221
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCee---ccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHH
Q psy13922 321 NPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSC---NPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLY 397 (509)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 397 (509)
+ ... .+.+.+.++++.+++.+.|+++ ++.+ .++ .|.++|+++.... + .+...+
T Consensus 338 ~----------~~~--~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~-~g~~~~v~l~~~~---------~-~~~~~l 393 (439)
T 2oat_A 338 E----------VLE--EENLAENADKLGIILRNELMKL-PSDVVTAVRG-KGLLNAIVIKETK---------D-WDAWKV 393 (439)
T ss_dssp H----------HHH--HTTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEE-ETTEEEEEECCCS---------S-CCHHHH
T ss_pred H----------HHh--hhhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEe-eeeEEEEEEecCc---------c-HHHHHH
Confidence 1 111 1245677888888999999887 4432 233 3455666664110 0 123444
Q ss_pred HHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCce
Q psy13922 398 AFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTY 477 (509)
Q Consensus 398 ~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (509)
...+ .++||.+.|+. .+
T Consensus 394 ~~~l-~~~Gv~v~~~~----------------------------------------------------~~---------- 410 (439)
T 2oat_A 394 CLRL-RDNGLLAKPTH----------------------------------------------------GD---------- 410 (439)
T ss_dssp HHHH-HHTTEECCBSS----------------------------------------------------SS----------
T ss_pred HHHH-HHCCeEEecCC----------------------------------------------------CC----------
Confidence 4444 45799998731 12
Q ss_pred eEEEEee--cChHHHHHHHHHHHHHHHH
Q psy13922 478 HFRTTIL--PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 478 ~~Rls~~--~~~~~i~~~~~~l~~~~~~ 503 (509)
++|+++. .+++++++++++|++++++
T Consensus 411 ~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 411 IIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 8999664 8999999999999998753
No 177
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.92 E-value=1.2e-24 Score=228.65 Aligned_cols=198 Identities=12% Similarity=0.088 Sum_probs=134.7
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH---hhcCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL---LIEDVDG 102 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~---l~~~gd~ 102 (509)
-|+.+++++.+.+.. ... |+ +..++++++++++.+.++ ..++|++|+|+++|+..+++. +.++ +
T Consensus 74 ~~~~v~~a~~~~~~~---~~~--~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~~~al~~ar~~~~~-~- 140 (453)
T 2cy8_A 74 GHPRVNAAIAEALSH---GVQ--YA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETTLLALRVARAFTGR-R- 140 (453)
T ss_dssp TCHHHHHHHHHHHTT---TCS--SC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHHHHHHHHHHHHHCC-C-
T ss_pred CCHHHHHHHHHHHHh---CCC--CC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHHHHHHHHHHHhhCC-C-
Confidence 378999999999877 221 32 246789999999988764 578999999999999999998 6544 3
Q ss_pred CCCeEEEcCCCChhHHHHHHh-c----------CCE------EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe
Q psy13922 103 KKPGVLIPIPQYPLYSASLAE-F----------NME------QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII 165 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~-~----------g~~------~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~ 165 (509)
.|++..|+|+++...+.. . |.. +..++ + .|++.|++.+++... ++++|+++
T Consensus 141 ---~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~-~d~~~le~~l~~~~~--~~~~vi~e 208 (453)
T 2cy8_A 141 ---MILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIR------P-DDIEGMREVFANHGS--DIAAFIAE 208 (453)
T ss_dssp ---EEEEECC----------------------------CGGGEEEEC------T-TCHHHHHHHHHHHGG--GEEEEEEC
T ss_pred ---EEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecC------C-CCHHHHHHHHHhcCC--CEEEEEEC
Confidence 899999999987654322 1 221 22222 1 389999999985211 56776666
Q ss_pred CCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC
Q psy13922 166 NPGNPTGQV-LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC 244 (509)
Q Consensus 166 ~p~NPtG~~-~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~ 244 (509)
..+||||.+ .+++++++|.++|++||++||+||+|.+| ..+ ....+... ++.+ + +.|+||.+ | +
T Consensus 209 p~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g--~~~~~~~~--~~~~-----d---i~s~sK~l-~-~ 273 (453)
T 2cy8_A 209 PVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVG--NHGMQALL--DVQP-----D---LTCLAKAS-A-G 273 (453)
T ss_dssp SSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTC--TTHHHHHH--TCCC-----S---EEEEEGGG-G-T
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccC--chhhhHHh--CCCC-----c---EEEEChhh-h-C
Confidence 556789975 57999999999999999999999999987 433 11122111 1111 2 33889999 5 6
Q ss_pred CCeeEEEeeecCCHHHHHHHHH
Q psy13922 245 GLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 245 Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
|+|+||++ .++++++.+..
T Consensus 274 G~~~G~v~---~~~~~~~~l~~ 292 (453)
T 2cy8_A 274 GLPGGILG---GREDVMGVLSR 292 (453)
T ss_dssp TSSCEEEE---ECHHHHTTSSS
T ss_pred CcceEEEe---chHHHHHHhcc
Confidence 99999998 68888887654
No 178
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.92 E-value=1.6e-24 Score=225.74 Aligned_cols=199 Identities=9% Similarity=0.049 Sum_probs=137.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-CCCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-DVDGKKP 105 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~~~~ 105 (509)
|+.+++++.+++.. .....| + .++++++++.+.+.++ .+++|++|+|+++++..+++.... .+ ++
T Consensus 70 ~p~v~~a~~~~~~~---~~~~~~-~----~~~~~~la~~l~~~~~---~~~~v~~~~ggsea~~~al~~a~~~~~---~~ 135 (427)
T 3fq8_A 70 HPEVIEALKVAMEK---GTSFGA-P----CALENVLAEMVNDAVP---SIEMVRFVNSGTEACMAVLRIMRAYTG---RD 135 (427)
T ss_dssp CHHHHHHHHHHHTT---CSCCSS-C----CHHHHHHHHHHHHHST---TCSEEEEESSHHHHHHHHHHHHHHHHC---CC
T ss_pred CHHHHHHHHHHHHh---CCCcCC-C----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHHHHHHHHHHhhC---CC
Confidence 89999999999987 222223 2 3455666666655554 578999999999999999965432 22 23
Q ss_pred eEEEcCCCChhHHHHHHhc-CC-------------------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe
Q psy13922 106 GVLIPIPQYPLYSASLAEF-NM-------------------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII 165 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~-g~-------------------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~ 165 (509)
.|++..|+|+++...+... |. .+..++.+ |++.|++.+++.. .++++|+++
T Consensus 136 ~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~~~--~~~~~vi~~ 206 (427)
T 3fq8_A 136 KIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFAENP--GEIAGVILE 206 (427)
T ss_dssp EEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHHHST--TTEEEEEEC
T ss_pred EEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHHhCC--CCEEEEEEc
Confidence 8999999998754332222 11 12333321 8999999997631 156777777
Q ss_pred CCCCCCCCCCC-HHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC
Q psy13922 166 NPGNPTGQVLT-KENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC 244 (509)
Q Consensus 166 ~p~NPtG~~~s-~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~ 244 (509)
.++|++|.+.+ ++++++|.++|++||++||+||+|.+| ..+. ...... .+..+ + +.|+||.+ | +
T Consensus 207 p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~--~~~~~~--~~~~~-----d---i~t~sK~~-~-~ 271 (427)
T 3fq8_A 207 PIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAY--GGVQEK--FGVTP-----D---LTTLGKII-G-G 271 (427)
T ss_dssp SSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBT--THHHHH--TTCCC-----S---EEEECGGG-G-T
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc--chhhHh--cCCCC-----C---hhhhhhhh-h-C
Confidence 77888887555 666999999999999999999999988 5432 111111 11111 1 45889999 5 8
Q ss_pred CCeeEEEeeecCCHHHHHHHHH
Q psy13922 245 GLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 245 Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
|+|+||++ +++++++.+..
T Consensus 272 G~~~G~~~---~~~~~~~~~~~ 290 (427)
T 3fq8_A 272 GLPVGAYG---GKREIMQLVAP 290 (427)
T ss_dssp TSSCEEEE---ECHHHHTTBTT
T ss_pred CcceEEEE---EcHHHHHhhcc
Confidence 99999998 79999988865
No 179
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.92 E-value=2.2e-23 Score=215.03 Aligned_cols=172 Identities=16% Similarity=0.162 Sum_probs=139.9
Q ss_pred CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----HhcCCE
Q psy13922 52 SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL----AEFNME 127 (509)
Q Consensus 52 ~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~~~g~~ 127 (509)
.....++++.++++++ .+++++++|+++|+..+++.+.++|| +|+++.|+|.++...+ +..|.+
T Consensus 65 ~~~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~~~gd----~Vi~~~~~y~~~~~~~~~~~~~~g~~ 132 (392)
T 3qhx_A 65 NPTRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAMLRPGD----HVVIPDDAYGGTFRLIDKVFTGWNVE 132 (392)
T ss_dssp CHHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHCCTTC----EEEEETTCCHHHHHHHHHTGGGGTCE
T ss_pred ChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEeCCCcchHHHHHHHHHHhcCcE
Confidence 3455788888888873 24789999999999999999998888 9999999999887766 667999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccC
Q psy13922 128 QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207 (509)
Q Consensus 128 ~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~ 207 (509)
++.++.+ |++.|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+...
T Consensus 133 ~~~v~~~-------d~~~l~~~i~~-----~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~- 196 (392)
T 3qhx_A 133 YTPVALA-------DLDAVRAAIRP-----TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ- 196 (392)
T ss_dssp EEEECTT-------CHHHHHHHCCT-----TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC-
T ss_pred EEEeCCC-------CHHHHHHhhCC-----CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence 9998754 79999999886 7999999999999999977 999999999999999999999864321
Q ss_pred CCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-CeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 208 GSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG-LRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G-lr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.+. +.+ ..++++|+||.+ |.+| +++||++. .++++.+.+.....
T Consensus 197 ----~~~-----~~~------~di~~~S~sK~l-g~~g~~~~G~v~~--~~~~~~~~l~~~~~ 241 (392)
T 3qhx_A 197 ----QPL-----SLG------ADVVLHSTTKYI-GGHSDVVGGALVT--NDEELDQSFAFLQN 241 (392)
T ss_dssp ----CGG-----GGT------CSEEEEETTTTT-TCSSCCCCEEEEE--SCHHHHHHHHHHHH
T ss_pred ----ChH-----HhC------CcEEEEcCcccc-CCCCCceEEEEEE--CcHHHHHHHHHHHH
Confidence 111 111 146678999999 5566 79999973 45788888877655
No 180
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.92 E-value=2.8e-24 Score=219.73 Aligned_cols=198 Identities=19% Similarity=0.190 Sum_probs=155.1
Q ss_pred CCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCCCC
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDVDG 102 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~ 102 (509)
|.+++.+++++.+.+.. .. |.+..+..++|+.++++++ .+++++|+|+++|+..+++++ .++||
T Consensus 13 ~~~~~~~~~a~~~~~~~---~~---~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~gd- 77 (373)
T 3frk_A 13 DEIEYEIKFKFEEIYKR---NW---FILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFGD- 77 (373)
T ss_dssp HHHHHHHHHHHHHHHHH---TC---CSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTTC-
T ss_pred CCCCHHHHHHHHHHHHC---CC---ccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCcC-
Confidence 44567788888888776 22 6677788999999999983 248999999999999999999 88888
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
.|+++.|+|.++...++..|++++.++.+++ ++.+|++.|++.+++ ++++|+ |+||||...+ +++
T Consensus 78 ---~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~-----~~~~v~---~~n~~G~~~~---l~~ 142 (373)
T 3frk_A 78 ---EVIVPSNTFIATALAVSYTGAKPIFVEPDIR-TYNIDPSLIESAITE-----KTKAII---AVHLYGQPAD---MDE 142 (373)
T ss_dssp ---EEEEETTSCTHHHHHHHHHSCEEEEECEETT-TTEECGGGTGGGCCT-----TEEEEE---EECCTTCCCC---HHH
T ss_pred ---EEEECCCCcHHHHHHHHHcCCEEEEEecccc-ccCcCHHHHHHhcCC-----CCeEEE---EECCCcCccc---HHH
Confidence 9999999999999999999999999998754 468899999998876 788888 6789999876 889
Q ss_pred HHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecc--cccCCCCCCeeEEEeeecCCHHH
Q psy13922 183 IIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCS--KGYMGECGLRGGYSEVINLDPGV 260 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~G~~Glr~G~v~~~~~~~~~ 260 (509)
|.++|+++|+++|+|++|+.+..-..... +. .. -+.+.||| |.+ |.+|. +|+++. .++++
T Consensus 143 i~~l~~~~~~~li~D~a~~~g~~~~~~~~----------~~---~~-d~~~~S~~~~K~l-~~~g~-gg~~~~--~~~~~ 204 (373)
T 3frk_A 143 IKRIAKKYNLKLIEDAAQAHGSLYKGMKV----------GS---LG-DAAGFSFYPAKNL-GSLGD-GGAVVT--NDKDL 204 (373)
T ss_dssp HHHHHHHHTCEEEEECTTCTTCEETTEET----------TS---SS-SEEEEECCTTSSS-CCSSS-CEEEEE--SCHHH
T ss_pred HHHHHHHcCCEEEEECCcccCCEECCEec----------cc---cc-cEEEEeCcCCCcc-Cccce-eEEEEe--CCHHH
Confidence 99999999999999999986443211110 00 01 24455877 988 43254 788763 66788
Q ss_pred HHHHHHhhh
Q psy13922 261 KAMLHKSIS 269 (509)
Q Consensus 261 ~~~l~~~~~ 269 (509)
.+.+.....
T Consensus 205 ~~~~~~~~~ 213 (373)
T 3frk_A 205 AEKIKALSN 213 (373)
T ss_dssp HHHHHHHHB
T ss_pred HHHHHHHHh
Confidence 888877654
No 181
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.92 E-value=2e-23 Score=219.15 Aligned_cols=294 Identities=14% Similarity=0.044 Sum_probs=192.4
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCC---cchHHHH--HHHH-HHHhhhcCCCCCCCcEEE-eCCHHHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDS---PGIEIIR--RHVA-QYISRRDGQPADWQDVIL-SAGASDGIKSVLK 94 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~---~g~~~lr--~~va-~~l~~~~g~~~~~~~i~~-t~G~~~al~~~~~ 94 (509)
+.+.+|+.+++++.+.+.+ .....|+.. .|...++ ++++ +.+.+.+|.+ .+.+ ++|+++++..++.
T Consensus 53 ~~~~~~~~v~~a~~~~~~~---~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~----~~~v~~~sGs~a~~~a~~ 125 (447)
T 3h7f_A 53 SENFVPRAVLQAQGSVLTN---KYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE----FANVQPHSGAQANAAVLH 125 (447)
T ss_dssp TCCCCCHHHHHHHTSGGGG---CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS----EEECCCSSHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhcC---CccccCCcccccCccHHHHHHHHHHHHHHHHHcCCC----ceEEEeCCHHHHHHHHHH
Confidence 3444699999999887764 111123321 1333333 4455 6665555632 2444 7788899999999
Q ss_pred HhhcCCCCCCCeEEEcCCCChhHH-H----HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCC
Q psy13922 95 LLIEDVDGKKPGVLIPIPQYPLYS-A----SLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGN 169 (509)
Q Consensus 95 ~l~~~gd~~~~~Vlv~~p~y~~~~-~----~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~N 169 (509)
+++++|| +|+++.|+|.++. . .+...+..++.++.+++ ++.+|++.|++.++.. ++++|++++|+|
T Consensus 126 ~~~~~Gd----~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~----~~~~i~~~~~~~ 196 (447)
T 3h7f_A 126 ALMSPGE----RLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPA-THLIDMDAVRATALEF----RPKVIIAGWSAY 196 (447)
T ss_dssp HHCCTTC----EEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTT-TCSCCHHHHHHHHHHH----CCSEEEEECSSC
T ss_pred HhcCCCC----EEEecCcccccccchhhhhhhcCCeeEEEEcCcCcc-cCCcCHHHHHHHHHhc----CCeEEEEcCCCC
Confidence 9999998 9999999987621 1 12224567777776644 4679999999999764 789999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCc-ccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 170 PTGQVLTKENIQDIIKFAHREKLFLFADEVYQD-NVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 170 PtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
|++. ++++|.++|+++|+++|+||+|.. +.+.+. ..+.. . ..+ +++.|+||.+ +|+|+
T Consensus 197 ~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~--~~~~~---~-------~~d-i~~~s~sK~l---~G~~g 255 (447)
T 3h7f_A 197 PRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGL--HPSPV---P-------HAD-VVSTTVHKTL---GGGRS 255 (447)
T ss_dssp CSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTS--SCCST---T-------TCS-EEEEESSGGG---CCCSC
T ss_pred CCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCC--CCCCC---C-------CCc-EEEecCCcCC---CCCCe
Confidence 9887 589999999999999999999743 333321 11111 1 112 4477999987 37899
Q ss_pred EEEeeecCCHHHHHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCC
Q psy13922 249 GYSEVINLDPGVKAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPG 326 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 326 (509)
||++ .++++++.+....... .+++.. ...++..++.
T Consensus 256 G~i~---~~~~~~~~l~~~~~~~~~~~~~~~----------------------------------~~~a~~~a~~----- 293 (447)
T 3h7f_A 256 GLIV---GKQQYAKAINSAVFPGQQGGPLMH----------------------------------VIAGKAVALK----- 293 (447)
T ss_dssp EEEE---ECGGGHHHHHHHHTTTTCSSCCHH----------------------------------HHHHHHHHHH-----
T ss_pred EEEE---ECHHHHHHHhhhcCCcccCCccHH----------------------------------HHHHHHHHHH-----
Confidence 9998 6888888887654422 222222 1112111111
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCeecc-CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHH
Q psy13922 327 EPSYEQFSREKQSVLDSLKQRAKMVADTFNSI----EGMSCNP-VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFEL 401 (509)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 401 (509)
.....+++..++.+.++++.+.+.|.+. +|+.+.. +.++.++|+++.-. + .+...+..+
T Consensus 294 ----~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~ 357 (447)
T 3h7f_A 294 ----IAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDS----------P--LDGQAAEDL 357 (447)
T ss_dssp ----HTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTS----------S--CCHHHHHHH
T ss_pred ----HhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCC----------C--CCHHHHHHH
Confidence 0011235677788888888888888775 5777764 34566777777511 1 133346788
Q ss_pred HhhcCeEEe
Q psy13922 402 LERTGICIV 410 (509)
Q Consensus 402 l~~~gI~v~ 410 (509)
|+++||.+.
T Consensus 358 l~~~GI~v~ 366 (447)
T 3h7f_A 358 LHEVGITVN 366 (447)
T ss_dssp HHHTTEECB
T ss_pred HHHCCeEEe
Confidence 888999998
No 182
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.92 E-value=3.1e-23 Score=215.45 Aligned_cols=167 Identities=17% Similarity=0.222 Sum_probs=133.5
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh----cCCEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE----FNMEQIG 130 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~----~g~~~~~ 130 (509)
..++++.+++++ | .+++++++|+++|+..++++++++|| +|+++.|+|.++...++. .|.+++.
T Consensus 83 ~~~l~~~la~~~----g----~~~~~~~~sG~~Ai~~al~~l~~~Gd----~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~ 150 (414)
T 3ndn_A 83 VSVFEERLRLIE----G----APAAFATASGMAAVFTSLGALLGAGD----RLVAARSLFGSCFVVCSEILPRWGVQTVF 150 (414)
T ss_dssp HHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTTC----EEEEESCCCHHHHHHHHTHHHHTTCEEEE
T ss_pred HHHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEcCCccchHHHHHHHHHHHcCcEEEE
Confidence 355666666665 4 36789999999999999999999998 999999999998877654 8999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCc
Q psy13922 131 YYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSK 210 (509)
Q Consensus 131 v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~ 210 (509)
++.+ |++.|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 151 v~~~-------d~~~l~~ai~~-----~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~---- 211 (414)
T 3ndn_A 151 VDGD-------DLSQWERALSV-----PTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ---- 211 (414)
T ss_dssp ECTT-------CHHHHHHHTSS-----CCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----
T ss_pred eCCC-------CHHHHHHhcCC-----CCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 9864 78999999876 7999999999999999977 889999999999999999999853321
Q ss_pred cccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-CeeEEEeeecCCHHHHH-HHHHhh
Q psy13922 211 FYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG-LRGGYSEVINLDPGVKA-MLHKSI 268 (509)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G-lr~G~v~~~~~~~~~~~-~l~~~~ 268 (509)
.++ +.+ ..++++|+||.+ |.+| +++|+++ .+++.+. .++...
T Consensus 212 -~~~-----~~g------~div~~S~sK~l-~~~G~~~~G~vv---~~~~~~~~~l~~~~ 255 (414)
T 3ndn_A 212 -QGF-----PLG------VDVVVYSGTKHI-DGQGRVLGGAIL---GDREYIDGPVQKLM 255 (414)
T ss_dssp -CCG-----GGT------CSEEEEETTTTT-TCSSCCCCEEEE---ECHHHHTTHHHHHH
T ss_pred -Cch-----hcC------CCeEeccCCccc-cCCCCceEEEEE---ECHHHHHHHHHHHH
Confidence 111 111 146678999999 5678 8999998 6776665 665443
No 183
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.92 E-value=8.8e-24 Score=222.58 Aligned_cols=351 Identities=17% Similarity=0.137 Sum_probs=216.7
Q ss_pred HHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC-----C--
Q psy13922 28 DDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED-----V-- 100 (509)
Q Consensus 28 ~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~-----g-- 100 (509)
+.+++++.+++.. +.. .|++..+..++++++++++. .+++++|+|+++|+..++++++++ |
T Consensus 53 ~~v~~a~~~~l~~---~~~-~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~ 120 (467)
T 2oqx_A 53 GAVTQSMQAAMMR---GDE-AYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLD 120 (467)
T ss_dssp SCCCHHHHHHTTS---CCC-CSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhcc---Ccc-eeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHHHHHHHHHHHhccccccCCCC
Confidence 6777777777654 333 48888888999999999983 368999999999999999999887 7
Q ss_pred --CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecC----CC----CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 101 --DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLD----ES----KQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 101 --d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~----~~----~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
| .|++..+.|..+.......|..++..... .. .++.+|++.|++.+++.. ..++++|++++|+||
T Consensus 121 ~~d----~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~-~~~~~~vi~~~~~n~ 195 (467)
T 2oqx_A 121 RSK----MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG-PNNVPYIVATITSNS 195 (467)
T ss_dssp TTT----CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC-GGGCCCEEEESSBCG
T ss_pred ccc----eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC-CCceeEEEEeccccC
Confidence 6 78887555555556666677777654321 11 235689999999998521 016899999999999
Q ss_pred C-CCCCCHHHHHHHHHHHHHCCcEEEEcccCCc-c---------cccCCCccccHHHHHHHhCCCCCCceeEEEEecccc
Q psy13922 171 T-GQVLTKENIQDIIKFAHREKLFLFADEVYQD-N---------VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKG 239 (509)
Q Consensus 171 t-G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 239 (509)
+ |.+++.+++++|+++|++||++||+|+++.. . .+.+ .+...+..+... ..+++ +.|+||.
T Consensus 196 ~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g----~~~~~~~~~~~~---~~d~~-~~s~sK~ 267 (467)
T 2oqx_A 196 AGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKD----WTIEQITRETYK---YADML-AMSAKKD 267 (467)
T ss_dssp GGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTT----SCHHHHHHHHGG---GCSEE-EEESSST
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccC----ccHHHHhhhhhc---cCCeE-EEecccc
Confidence 8 8999999999999999999999999976543 1 2221 233333211000 11244 5699999
Q ss_pred cCCCCCCeeEEEeeecCCHH-HHHHHHHhhhc---ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccch
Q psy13922 240 YMGECGLRGGYSEVINLDPG-VKAMLHKSISA---MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTV 315 (509)
Q Consensus 240 ~~G~~Glr~G~v~~~~~~~~-~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 315 (509)
+ |++ + .||++ .+++ +++.+.+.... ..+....+..+ +. +..+
T Consensus 268 ~-g~~-~-Gg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~-------------~~~a 313 (467)
T 2oqx_A 268 A-MVP-M-GGLLC---MKDDSFFDVYTECRTLCVVQEGFPTYGGLE---------------GG-------------AMER 313 (467)
T ss_dssp T-CCS-S-CEEEE---ECSGGGHHHHHHHHHHHHHTTSSCCCCCCC---------------HH-------------HHHH
T ss_pred c-CCC-C-ceEEE---ecChhHHHHHHHHHHhhhccCCcccccchh---------------hh-------------HHHH
Confidence 9 665 1 27765 4544 44443332221 11111110000 00 1111
Q ss_pred hhcccCCCCCCCCchHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCC-
Q psy13922 316 MDCVVNPPQPGEPSYEQFSREK-QSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCP- 393 (509)
Q Consensus 316 l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~- 393 (509)
+...+ ..+ + +...+...++.+.+.+.|+++ ++.+. +.+++++|+++.. .. .+...
T Consensus 314 l~~~l----------~~~---~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~---~~-----~~~~~~ 370 (467)
T 2oqx_A 314 LAVGL----------YDG---MNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGK---LL-----PHIPAD 370 (467)
T ss_dssp HHHHH----------HHT---TCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHH---HS-----TTSCGG
T ss_pred HHHhh----------Hhh---hhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechh---hc-----ccCCcc
Confidence 11110 111 1 123344567788889999888 88877 7788888876630 00 01111
Q ss_pred ---cHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCC
Q psy13922 394 ---SVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGF 470 (509)
Q Consensus 394 ---~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (509)
...++..++.++||.+.|+..|.... . +..+.
T Consensus 371 ~~~~~~l~~~L~~~~gv~~~~~~~~~~~~---------------------------~------------------~~~g~ 405 (467)
T 2oqx_A 371 QFPAQALACELYKVAGIRAVEIGSFLLGR---------------------------D------------------PKTGK 405 (467)
T ss_dssp GCHHHHHHHHHHHHHCEECEEESHHHHCB---------------------------C------------------TTTCS
T ss_pred cccHHHHHHHHHHhcCceecccccccccc---------------------------c------------------ccccc
Confidence 22334555588999999855321100 0 00000
Q ss_pred CCCCCceeEEEEee---cChHHHHHHHHHHHHHHHHHH
Q psy13922 471 GQVPGTYHFRTTIL---PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 471 ~~~~~~~~~Rls~~---~~~~~i~~~~~~l~~~~~~~~ 505 (509)
....+..++|+++. +++++|++++++|++++++..
T Consensus 406 ~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 406 QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp BCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 00111238999998 789999999999999987643
No 184
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.92 E-value=8.4e-23 Score=212.06 Aligned_cols=161 Identities=12% Similarity=0.109 Sum_probs=130.5
Q ss_pred CCCC--cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----H
Q psy13922 49 YTDS--PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL----A 122 (509)
Q Consensus 49 Y~~~--~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~ 122 (509)
|+.. ....++++.++++++ .+++++|+|+++|+..+++++.++|| +|+++.|+|.+....+ +
T Consensus 50 y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~gd----~vi~~~~~~~~~~~~~~~~~~ 117 (412)
T 2cb1_A 50 YARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPGD----EVVAAKGLFGQTIGLFGQVLS 117 (412)
T ss_dssp BTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTC----EEEEETTCCHHHHHHHHHTTT
T ss_pred cCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEeCCCchhHHHHHHHHHH
Confidence 6543 567889999998883 24899999999999999999988888 9999999999866654 4
Q ss_pred hcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCc
Q psy13922 123 EFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQD 202 (509)
Q Consensus 123 ~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~ 202 (509)
..|.+++.++. |++.|++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..
T Consensus 118 ~~g~~~~~~~~--------~~~~l~~~i~~-----~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~~ 181 (412)
T 2cb1_A 118 LMGVTVRYVDP--------EPEAVREALSA-----KTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFGA 181 (412)
T ss_dssp TTTCEEEEECS--------SHHHHHHHCCT-----TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGT
T ss_pred HcCCEEEEECC--------CHHHHHHHhcc-----CCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcc
Confidence 57999998864 38889888876 7999999999999999987 99999999999999999999987
Q ss_pred ccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 203 NVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
+.+. ..+. +.+ ..+++.|+||.+ |.+|.|+|++++
T Consensus 182 ~~~~----~~~~-----~~~------~di~~~S~~K~~-~~~~~~~G~~~~ 216 (412)
T 2cb1_A 182 AGAL----CRPL-----AWG------AHVVVESLTKWA-SGHGSVLGGAVL 216 (412)
T ss_dssp TTTS----CCGG-----GGT------CSEEEEETTTTT-TCSSCCCCEEEE
T ss_pred cccc----CCcc-----ccC------CeEEEECCcccc-cCCCCcEEEEEE
Confidence 6221 1111 111 256678999999 579999999874
No 185
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.92 E-value=6.9e-23 Score=211.28 Aligned_cols=202 Identities=14% Similarity=0.203 Sum_probs=151.9
Q ss_pred CCCCCCCHHHHHHHHHHHhcccCCCcccCCCCcc--hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-h
Q psy13922 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPG--IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-I 97 (509)
Q Consensus 21 ~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g--~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~ 97 (509)
++.|.+++.+++++.+.+.. + |.+..| ..++|++++++++ .++|++|+|+++++..+++++ .
T Consensus 5 ~~~p~~~~~v~~a~~~~~~~---~----~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~ 69 (394)
T 1o69_A 5 LSPPHMGGNELKYIEEVFKS---N----YIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGV 69 (394)
T ss_dssp -------CCHHHHHHHHHHH---T----TTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHHHHHHc---C----CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCC
Confidence 46788889999999998876 2 555556 7899999999983 268999999999999999999 8
Q ss_pred cCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 98 EDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 98 ~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
++|| .|+++.|+|.++...++..|++++.++.++ +|.+|++.|++.+++.. .++++|++++ |+|...
T Consensus 70 ~~gd----~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~--~~~~~v~~~~---~~G~~~-- 136 (394)
T 1o69_A 70 KQDD----IVLASSFTFIASVAPICYLKAKPVFIDCDE--TYNIDVDLLKLAIKECE--KKPKALILTH---LYGNAA-- 136 (394)
T ss_dssp CTTC----EEEEESSSCGGGTHHHHHTTCEEEEECBCT--TSSBCHHHHHHHHHHCS--SCCCEEEEEC---GGGCCC--
T ss_pred CCCC----EEEECCCccHHHHHHHHHcCCEEEEEEeCC--CCCcCHHHHHHHHhccc--CCceEEEEEC---CCCChh--
Confidence 8888 999999999999999999999999999873 46899999999997521 1488888875 899764
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCC-cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQ-DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINL 256 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~ 256 (509)
++++|.++|+++|+++|+|++|. ++.+.+. ...++ . -+.+.|+||.. +++|.|+||+++ .
T Consensus 137 -~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~~~-------------~-~~~~~s~s~~K-~l~~~~~G~~~~--~ 197 (394)
T 1o69_A 137 -KMDEIVEICKENDIVLIEDAAEALGSFYKNK-ALGTF-------------G-EFGVYSYNGNK-IITTSGGGMLIG--K 197 (394)
T ss_dssp -CHHHHHHHHHHTTCEEEEECTTCTTCEETTE-ETTSS-------------S-SEEEEECCTTS-SSCCSSCEEEEE--S
T ss_pred -hHHHHHHHHHHcCCEEEEECcCcccceeCCc-ccccc-------------c-CcEEEEEeCCc-cCCCCCceEEEE--C
Confidence 49999999999999999999998 4544321 11010 0 12344664333 345679999983 3
Q ss_pred CHHHHHHHHHhhh
Q psy13922 257 DPGVKAMLHKSIS 269 (509)
Q Consensus 257 ~~~~~~~l~~~~~ 269 (509)
++++++.+.....
T Consensus 198 ~~~l~~~l~~~~~ 210 (394)
T 1o69_A 198 NKEKIEKARFYST 210 (394)
T ss_dssp CHHHHHHHHHHTB
T ss_pred CHHHHHHHHHHHH
Confidence 6899998887644
No 186
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.92 E-value=2.5e-24 Score=224.93 Aligned_cols=198 Identities=12% Similarity=0.067 Sum_probs=136.3
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH---hhcCCCC
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL---LIEDVDG 102 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~---l~~~gd~ 102 (509)
-|+.+++++.+++.+ .....|. .....++++.+++++ + ..++|++|+|+++|+..+++. +.+ ++
T Consensus 73 ~~~~v~~a~~~~~~~---~~~~~~~-~~~~~~l~~~la~~~----~---~~~~v~~~~sgseA~~~al~~ar~~~~-~~- 139 (434)
T 2epj_A 73 KHPRVLEAVEEALAR---GWLYGAP-GEAEVLLAEKILGYV----K---RGGMIRFVNSGTEATMTAIRLARGYTG-RD- 139 (434)
T ss_dssp TCHHHHHHHHHHHHT---CSCCSSC-CHHHHHHHHHHHHHH----C---TTCEEEEESSHHHHHHHHHHHHHHHHC-CC-
T ss_pred CCHHHHHHHHHHHHh---CCCCCCC-CHHHHHHHHHHHHhC----C---CCCEEEEeCCHHHHHHHHHHHHHHhhC-CC-
Confidence 378999999999987 2222242 222244555555544 3 468999999999999999988 443 34
Q ss_pred CCCeEEEcCCCChhHHHHHH--------------hcCC------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEE
Q psy13922 103 KKPGVLIPIPQYPLYSASLA--------------EFNM------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAI 162 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~--------------~~g~------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~i 162 (509)
.|++..|+|+++...+. ..|. +++.++. .|++.|++.+++... ++++|
T Consensus 140 ---~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~--~~~~v 207 (434)
T 2epj_A 140 ---LILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFAEYGD--RIAGV 207 (434)
T ss_dssp ---EEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHHHHGG--GEEEE
T ss_pred ---eEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHHhCCC--CEEEE
Confidence 89999999987644321 1132 2444442 289999999975211 46776
Q ss_pred EEeCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 163 VIINPGNPTGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 163 vi~~p~NPtG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
+++..+|+||.++ +++++++|.++|++||+++|+||+|.+| ..+ ........ +..+ + +.|+||.+
T Consensus 208 i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g--~~~~~~~~--~~~~-----d---i~s~sK~l- 273 (434)
T 2epj_A 208 IVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLG--LEGAQGYF--NIEG-----D---IIVLGKII- 273 (434)
T ss_dssp EECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSS--TTHHHHHH--TCCC-----S---EEEEEGGG-
T ss_pred EEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCC--cchhhHHh--CCCC-----C---eeeecchh-
Confidence 6665567899865 7999999999999999999999999987 332 11111111 1111 1 34889999
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
| +|+|+||++ .++++++.+..
T Consensus 274 ~-~G~~~G~v~---~~~~~~~~l~~ 294 (434)
T 2epj_A 274 G-GGFPVGAVA---GSREVMSLLTP 294 (434)
T ss_dssp G-TTSSCEEEE---ECHHHHTTBTT
T ss_pred c-CCcceeeee---ecHHHHHhhcc
Confidence 5 599999998 68888887754
No 187
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.92 E-value=1.3e-23 Score=216.88 Aligned_cols=338 Identities=11% Similarity=0.054 Sum_probs=200.6
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE-eCCHHHHHHHHHHHhhcCC
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL-SAGASDGIKSVLKLLIEDV 100 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~-t~G~~~al~~~~~~l~~~g 100 (509)
+++.+|+.+++++.+..... .+... +.+ ...++.+++.+.+.+.+|.+ ++++|++ |+|++++++.+++++.++|
T Consensus 47 ~~~~~~~~v~~a~~~~~~~~-~~~~~-~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~al~~~~~~l~~~g 121 (398)
T 2fyf_A 47 GPSKVRLEQLQTLTTTAAAL-FGTSH-RQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATAFWDAAAFGLIDKR 121 (398)
T ss_dssp SSCCCCHHHHHGGGTTTTTT-TTSCT-TSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHHHHHHHHHHTCSSC
T ss_pred CCCCCCHHHHHHHhhcCCCc-cCcCc-CCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhHHHHHHHHHhcCCC
Confidence 55567888888886531110 01112 222 11233444444444444644 3568998 9999999999999998764
Q ss_pred CCCCCeEEEcCCCChh-HHHHHHhc--CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH
Q psy13922 101 DGKKPGVLIPIPQYPL-YSASLAEF--NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK 177 (509)
Q Consensus 101 d~~~~~Vlv~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~ 177 (509)
.+++..+.|.. ....+... |.+++.++.+. ++..+.+ +.. ++++|++++|+||||.+++.
T Consensus 122 -----v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--g~~~~~~-----i~~-----~~~~v~~~~~~nptG~~~~~ 184 (398)
T 2fyf_A 122 -----SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDP--GSAPEPQ-----TDP-----SVDVIAWAHNETSTGVAVAV 184 (398)
T ss_dssp -----EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCT--TCCCCCC-----CCT-----TCSEEEEESEETTTTEECCC
T ss_pred -----eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCC--CCCCCcc-----ccC-----CCCEEEEeCcCCCcceecch
Confidence 23444433321 12234555 88888888762 2333321 233 79999999999999999997
Q ss_pred HHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCC
Q psy13922 178 ENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLD 257 (509)
Q Consensus 178 ~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~ 257 (509)
+++.++ +|+++|+|++|..+... ..+. + . .+++.|+||.+ |++| ++||++ .+
T Consensus 185 ~~i~~~------~~~~vivD~a~~~~~~~-----~~~~----~-------~-di~~~s~sK~~-~~~g-g~g~l~---~~ 236 (398)
T 2fyf_A 185 RRPEGS------DDALVVIDATSGAGGLP-----VDIA----E-------T-DAYYFAPQKNF-ASDG-GLWLAI---MS 236 (398)
T ss_dssp CCCTTC------C-CEEEEECTTTTTTSC-----CCGG----G-------C-SEEEECTTSTT-CSCS-SEEEEE---EC
T ss_pred HHhhhh------cCCeEEEEeccccCCcc-----cCcc----c-------C-cEEEEecCccc-CCCC-ceEEEE---EC
Confidence 666664 89999999999875421 1111 1 1 34567999999 6775 689988 68
Q ss_pred HHHHHHHHHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHH
Q psy13922 258 PGVKAMLHKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSRE 336 (509)
Q Consensus 258 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 336 (509)
+++++.+.+.... ...++....... .+........++....++.++..++ +...++
T Consensus 237 ~~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~t~~~~~~~a~~~al----------~~~~~~ 293 (398)
T 2fyf_A 237 PAALSRIEAIAATGRWVPDFLSLPIA-------------VENSLKNQTYNTPAIATLALLAEQI----------DWLVGN 293 (398)
T ss_dssp HHHHHHHHHHHHTTCCCCGGGCHHHH-------------HHHHTTTCCSSCCCHHHHHHHHHHH----------HHHHHH
T ss_pred HHHHHHhhcccccCCCCCcEEehHHH-------------hhhcccCCCCCCCCHHHHHHHHHHH----------HHHHHc
Confidence 8888887653210 000000000000 0000000000000111233333332 112222
Q ss_pred --HHHHHHHHHHHHHHHHHHHhcCCCCeecc--C--CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 337 --KQSVLDSLKQRAKMVADTFNSIEGMSCNP--V--QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 337 --~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
++++++.++++++.+.+.|+++||+++.. + .+++++|++++ . ++ +..++. +.|.++||.++
T Consensus 294 g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~--~---------~~-~~~~l~-~~L~~~gI~v~ 360 (398)
T 2fyf_A 294 GGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFV--D---------DV-DAGTVA-KILRANGIVDT 360 (398)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEEC--T---------TS-CHHHHH-HHHHHTTCBCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECC--C---------CC-CHHHHH-HHHHHCCcEEe
Confidence 67788899999999999999988888763 4 45657886663 1 22 234444 44455599999
Q ss_pred cCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChH
Q psy13922 411 PGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPE 488 (509)
Q Consensus 411 pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~ 488 (509)
+|. .. .+.+ ++|+|+. ++++
T Consensus 361 ~g~--~~------------------------------------------------~~~~--------~iRis~~~~~t~e 382 (398)
T 2fyf_A 361 EPY--RK------------------------------------------------LGRN--------QLRVAMFPAVEPD 382 (398)
T ss_dssp SCC--TT------------------------------------------------TCSS--------EEEEECCTTSCHH
T ss_pred cCc--cc------------------------------------------------CCCC--------EEEEEecCCCCHH
Confidence 862 21 1122 8999998 6999
Q ss_pred HHHHHHHHHHHHHHH
Q psy13922 489 KLKAMLEKFREFHEE 503 (509)
Q Consensus 489 ~i~~~~~~l~~~~~~ 503 (509)
++++++++|++++++
T Consensus 383 ~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 383 DVSALTECVDWVVER 397 (398)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988753
No 188
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.92 E-value=5e-23 Score=212.75 Aligned_cols=172 Identities=20% Similarity=0.248 Sum_probs=135.7
Q ss_pred CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----HhcCC
Q psy13922 51 DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL----AEFNM 126 (509)
Q Consensus 51 ~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~~~g~ 126 (509)
+.....++++.+++++ |. ++.++++++++++..+++++.++|| +|+++.|+|.++...+ ...|.
T Consensus 63 ~~~~~~~l~~~la~~~----g~----~~~i~~~sG~~a~~~~l~~~~~~gd----~vl~~~~~~~~~~~~~~~~~~~~g~ 130 (398)
T 1gc0_A 63 SNPTLNLLEARMASLE----GG----EAGLALASGMGAITSTLWTLLRPGD----EVLLGNTLYGCTFAFLHHGIGEFGV 130 (398)
T ss_dssp CCHHHHHHHHHHHHHH----TC----SEEEEESSHHHHHHHHHHHHCCTTC----EEEEESSCCSHHHHHHHHTGGGGTC
T ss_pred CChHHHHHHHHHHHHh----CC----CcEEEECCHHHHHHHHHHHHhcCCC----EEEEeCCCchhHHHHHHHHHHHcCC
Confidence 4456678888888887 31 2555566667999999999988888 9999999999987776 66799
Q ss_pred EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCccccc
Q psy13922 127 EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYA 206 (509)
Q Consensus 127 ~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~ 206 (509)
++..++.+ |++.+++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..+.+.
T Consensus 131 ~~~~~~~~-------d~~~l~~~i~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~ 195 (398)
T 1gc0_A 131 KLRHVDMA-------DLQALEAAMTP-----ATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQ 195 (398)
T ss_dssp EEEEECTT-------CHHHHHHHCCT-----TEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHC
T ss_pred EEEEECCC-------CHHHHHHhcCC-----CCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 99988753 78999998876 7999999999999999987 899999999999999999999876542
Q ss_pred CCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-EEEeeecCCHHHHH-HHHHhhh
Q psy13922 207 EGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG-GYSEVINLDPGVKA-MLHKSIS 269 (509)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~-G~v~~~~~~~~~~~-~l~~~~~ 269 (509)
. ++ ..+ ..+++.|+||.+ |.+|.|+ ||++ .++++++ .+.....
T Consensus 196 ~-----~~-----~~~------~d~~~~S~sK~~-~~~~~~~~G~l~---~~~~~~~~~~~~~~~ 240 (398)
T 1gc0_A 196 R-----PL-----ELG------ADLVVHSATKYL-SGHGDITAGIVV---GSQALVDRIRLQGLK 240 (398)
T ss_dssp C-----GG-----GGT------CSEEEEETTTTT-TCSSSCCCEEEE---ECHHHHHHHHHTHHH
T ss_pred C-----ch-----hhC------ceEEEECCcccc-CCCCCCeEEEEE---EChHHHHHHHHHHhh
Confidence 1 11 111 146677999999 6799997 8887 5766655 5554443
No 189
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.92 E-value=2.1e-23 Score=216.07 Aligned_cols=177 Identities=18% Similarity=0.215 Sum_probs=136.5
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----H
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----L 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~ 121 (509)
+++|+ ..+..+++++++++++ . .+.|++++| ++++..+++ ++++|| +|+++.|+|.+.... +
T Consensus 61 y~r~~-~p~~~~l~~~la~~~g----~---~~~i~~~sG-~~ai~~~~~-l~~~gd----~Vl~~~~~y~~~~~~~~~~~ 126 (403)
T 3cog_A 61 YSRSG-NPTRNCLEKAVAALDG----A---KYCLAFASG-LAATVTITH-LLKAGD----QIICMDDVYGGTNRYFRQVA 126 (403)
T ss_dssp ------CHHHHHHHHHHHHHHT----C---SEEEEESCH-HHHHHHHHT-TSCTTC----EEEEESSCCHHHHHHHHHTG
T ss_pred ccCCC-CchHHHHHHHHHHHhC----C---CcEEEECCH-HHHHHHHHH-HhCCCC----EEEEeCCCcchHHHHHHHHH
Confidence 34454 3566899999999983 1 256666666 589999999 888888 999999999985554 3
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC-cEEEEcccC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREK-LFLFADEVY 200 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~-i~lI~Deay 200 (509)
+..|.+++.++.+ |++.+++.+++ ++++|++++|+||||.+++ +++|+++|+++| +++|+|++|
T Consensus 127 ~~~G~~v~~v~~~-------d~~~l~~~i~~-----~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~ 191 (403)
T 3cog_A 127 SEFGLKISFVDCS-------KIKLLEAAITP-----ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTF 191 (403)
T ss_dssp GGGTCEEEEECTT-------SHHHHHHHCCT-----TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTT
T ss_pred HHcCCEEEEECCC-------CHHHHHHhcCc-----CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCC
Confidence 5679999998864 78999998876 7999999999999999997 899999999999 999999999
Q ss_pred CcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 201 QDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
..+.+.. ++. .+ ..++++|+||.++|..|+|+||++. .++++++.+.....
T Consensus 192 ~~~~~~~-----~~~-----~~------~div~~S~sK~~~g~~~~~~G~v~~--~~~~l~~~l~~~~~ 242 (403)
T 3cog_A 192 MSPYFQR-----PLA-----LG------ADISMYSATKYMNGHSDVVMGLVSV--NCESLHNRLRFLQN 242 (403)
T ss_dssp TCTTTCC-----TTT-----TT------CSEEEEETTTTTTCSSCCCCEEEEE--CCHHHHHHHHHHHH
T ss_pred cccccCC-----ccc-----cC------CeEEEEcChhhccCCCCCeEEEEEE--CcHHHHHHHHHHHH
Confidence 9865421 110 11 2577889999994433468999973 46899998877655
No 190
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.92 E-value=1.3e-23 Score=211.07 Aligned_cols=167 Identities=16% Similarity=0.193 Sum_probs=134.1
Q ss_pred HHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----HhcCCEEEEEe
Q psy13922 57 IIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL----AEFNMEQIGYY 132 (509)
Q Consensus 57 ~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~~~g~~~~~v~ 132 (509)
++++.++++++ .+ +.+++++| ++++..+++++.++|| .|+++.|+|.++...+ +..|.+++.++
T Consensus 2 ~l~~~la~~~g------~~-~~i~~~sG-~~a~~~~~~~~~~~g~----~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 69 (331)
T 1pff_A 2 ALEGKIAKLEH------AE-ACAATASG-MGAIAASVWTFLKAGD----HLISDDCLYGCTHALFEHQLRKFGVEVDFID 69 (331)
T ss_dssp HHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHCCTTC----EEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred hHHHHHHHHhC------CC-eEEEeCCh-HHHHHHHHHHhcCCCC----EEEEcCCCcchHHHHHHHHHHhcCCEEEEeC
Confidence 58899999883 22 44555555 8999999999988888 9999999999987765 45799999887
Q ss_pred cCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH-CCcEEEEcccCCcccccCCCcc
Q psy13922 133 LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR-EKLFLFADEVYQDNVYAEGSKF 211 (509)
Q Consensus 133 ~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~-~~i~lI~Deay~~~~~~~~~~~ 211 (509)
. .|++.+++.+++ ++++|++++|+||||.+++ +++|.++|++ +|+++|+|++|..+.+.
T Consensus 70 ~-------~d~~~l~~~i~~-----~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----- 129 (331)
T 1pff_A 70 M-------AVPGNIEKHLKP-----NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----- 129 (331)
T ss_dssp T-------TSTTHHHHTCCT-----TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC-----
T ss_pred C-------CCHHHHHHhhcC-----CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC-----
Confidence 5 378889888875 7999999999999999997 8999999999 99999999999875542
Q ss_pred ccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe-eEEEeeecCCH-HHHHHHHHhhhc
Q psy13922 212 YSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR-GGYSEVINLDP-GVKAMLHKSISA 270 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr-~G~v~~~~~~~-~~~~~l~~~~~~ 270 (509)
.++ +. ...++++|+||.+ |.+|.| +||++ .++ ++++.+......
T Consensus 130 ~~~-----~~------~~d~~~~s~~K~~-~~~~~r~~G~~~---~~~~~~~~~l~~~~~~ 175 (331)
T 1pff_A 130 NPL-----DL------GVDIVVHSATKYI-NGHTDVVAGLVC---SRADIIAKVKSQGIKD 175 (331)
T ss_dssp CGG-----GG------TCSEEEEETTTTT-SSSSSCCCEEEE---ECHHHHHHHHHTCCCC
T ss_pred Chh-----hc------CCcEEEEECcccc-CCCCCceEEEEE---eCcHHHHHHHHHHHHh
Confidence 111 11 1256788999999 679999 89998 576 898888775543
No 191
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.91 E-value=3.6e-22 Score=208.88 Aligned_cols=170 Identities=12% Similarity=0.172 Sum_probs=133.7
Q ss_pred cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----HHhcCCEE
Q psy13922 53 PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----LAEFNMEQ 128 (509)
Q Consensus 53 ~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~~~~g~~~ 128 (509)
....++++.+++++ |. .+.|++++|+ ++++.++++++++|| +|+++.|.|.++... ++..|+++
T Consensus 114 ~~~~~l~~~lA~l~----g~---~~~v~~~sG~-~Ai~~al~~l~~~Gd----~Vi~~~~~y~~~~~~~~~~~~~~G~~v 181 (445)
T 1qgn_A 114 PTTVVLEEKISALE----GA---ESTLLMASGM-CASTVMLLALVPAGG----HIVTTTDCYRKTRIFIETILPKMGITA 181 (445)
T ss_dssp HHHHHHHHHHHHHH----TC---SEEEEESCHH-HHHHHHHHHHSCSSC----EEEEETTSCHHHHHHHHHTGGGGTCEE
T ss_pred hHHHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHHhCCCC----EEEEcCCCchhHHHHHHHHHHHcCCEE
Confidence 34468899999887 32 2455555555 999999999999888 999999999987764 45679999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHhhhccCCc-eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccC
Q psy13922 129 IGYYLDESKQWGLPISELERSITEARKHCNP-RAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207 (509)
Q Consensus 129 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~-~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~ 207 (509)
+.++.+ |++.|++++++ ++ ++|++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 182 ~~v~~~-------d~~~l~~ai~~-----~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~- 245 (445)
T 1qgn_A 182 TVIDPA-------DVGALELALNQ-----KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ- 245 (445)
T ss_dssp EEECSS-------CHHHHHHHHHH-----SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-
T ss_pred EEeCCC-------CHHHHHHHhcc-----CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence 998753 79999999987 68 99999999999999987 889999999999999999999864321
Q ss_pred CCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-CeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 208 GSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG-LRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G-lr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.+. +.+ ..++++|+||.+ |..| +++||++ .++++++.+.....
T Consensus 246 ----~~~-----~~g------~Div~~S~sK~~-gg~gd~~~G~l~---~~~~l~~~l~~~~~ 289 (445)
T 1qgn_A 246 ----KAL-----ALG------ADLVLHSATKFL-GGHNDVLAGCIS---GPLKLVSEIRNLHH 289 (445)
T ss_dssp ----CTT-----TTT------CSEEEECTTTTT-TCSSSCCCEEEE---ECHHHHHHHHHHHH
T ss_pred ----Ccc-----ccC------CEEEEECCcccc-cccccceEEEEE---ECHHHHHHHHHHHH
Confidence 111 111 146678999999 4344 5799998 68889888876554
No 192
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.91 E-value=4.4e-23 Score=218.73 Aligned_cols=364 Identities=12% Similarity=0.045 Sum_probs=224.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCC-------CCcEEEeCCHHHHHHHHHHHhhcC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPAD-------WQDVILSAGASDGIKSVLKLLIED 99 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~~~ 99 (509)
|..+.+.+..++.. ... .|....+..++++.+++++.+.+|.+.. ..++++|+|+|+|+..++.++...
T Consensus 87 ~~~~~~~~~~~~n~---~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~ 162 (486)
T 1js3_A 87 PAMLADMLCGAIGC---IGF-SWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTK 162 (486)
T ss_dssp HHHHHHHHHHHHCC---CCS-SGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc---Ccc-ccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHH
Confidence 34566666666643 333 3777777889999999999998886632 357899999999999988776432
Q ss_pred ---------CCC------CCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEE
Q psy13922 100 ---------VDG------KKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIV 163 (509)
Q Consensus 100 ---------gd~------~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~iv 163 (509)
||- .+..|+++.+.|.++...++..|++++.+|.++ ++.+|++.|++++++..+. ..+.+|+
T Consensus 163 ~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~p~~vv 240 (486)
T 1js3_A 163 VVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDG--KFAMRASALQEALERDKAAGLIPFFVV 240 (486)
T ss_dssp HHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecCC--CCCCCHHHHHHHHHHHHhCCCCceEEE
Confidence 210 011378899999999999999999999999863 5789999999999874211 1134788
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCC
Q psy13922 164 IINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGE 243 (509)
Q Consensus 164 i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~ 243 (509)
+++|+||||.+ +++++|+++|++||+++++|++|+.+.+... .+.... ..+ ...+++++ +++|.+ +.
T Consensus 241 ~~~~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~-~~~~~~---~g~----~~adsi~~-~~hK~~-~~ 307 (486)
T 1js3_A 241 ATLGTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICP-EFRHLL---NGV----EFADSFNF-NPHKWL-LV 307 (486)
T ss_dssp EEBSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGST-TTGGGG---TTG----GGCSEEEE-CHHHHS-SC
T ss_pred EeCCCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCH-HHHHHh---cCc----cccCeeEE-chhhhc-CC
Confidence 89999999988 4599999999999999999999988654321 111110 011 02236654 889998 55
Q ss_pred CCCeeEEEeeecCCHHH-HHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCC
Q psy13922 244 CGLRGGYSEVINLDPGV-KAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNP 322 (509)
Q Consensus 244 ~Glr~G~v~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 322 (509)
| .++|++++ .++.. .+.+.... .+............... + | .+..+.+. ...++..++.
T Consensus 308 p-~~~G~l~~--~~~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~-~--~----------~~~~~rr~--~~~~~~~al~- 367 (486)
T 1js3_A 308 N-FDCSAMWV--KRRTDLTGAFKLDP-VYLKHSHQGSGLITDYR-H--W----------QLPLGRRF--RSLKMWFVFR- 367 (486)
T ss_dssp C-SSCEEEEE--SCHHHHHGGGC-------------CCSCCCGG-G--S----------SSCSCCCC--THHHHHHHHH-
T ss_pred C-cceEEEEE--eCHHHHHHHhcCCc-hhhCCCcccccCCCCcc-c--c----------CCCCCCch--hHHHHHHHHH-
Confidence 4 89999985 66664 34331100 00000000000000000 0 0 00000000 0011111110
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec-cCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHH
Q psy13922 323 PQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN-PVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFEL 401 (509)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 401 (509)
....++++++.+...++++++.+.|+++|++++. ++..+++.| .+.-... ....+...
T Consensus 368 --------~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~~-----------~~~~l~~~- 426 (486)
T 1js3_A 368 --------MYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCF-RLKGSDG-----------LNEALLER- 426 (486)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEE-EESSCHH-----------HHHHHHHH-
T ss_pred --------HHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEE-EecChHH-----------HHHHHHHH-
Confidence 0112347788888999999999999999899886 466666655 3321110 02333344
Q ss_pred HhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEE
Q psy13922 402 LERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRT 481 (509)
Q Consensus 402 l~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rl 481 (509)
|.+.|+.+.++..+ .+ ..++|+
T Consensus 427 L~~~g~~~~~~~~~--------------------------------------------------~~--------~~~lRi 448 (486)
T 1js3_A 427 INSARKIHLVPCRL--------------------------------------------------RG--------QFVLRF 448 (486)
T ss_dssp HHHHTSCBCEEEEE--------------------------------------------------TT--------EEEEEE
T ss_pred HHhcCCEEEEEEEE--------------------------------------------------CC--------EEEEEE
Confidence 44456543321111 11 228999
Q ss_pred Eee---cChHHHHHHHHHHHHHHHHHHhhc
Q psy13922 482 TIL---PQPEKLKAMLEKFREFHEEFLAKY 508 (509)
Q Consensus 482 s~~---~~~~~i~~~~~~l~~~~~~~~~~~ 508 (509)
+++ ++.++|++++++|+++++++.+++
T Consensus 449 ~~~~~~~t~~di~~~~~~l~~~~~~~~~~~ 478 (486)
T 1js3_A 449 AICSRKVESGHVRLAWEHIRGLAAELLAAE 478 (486)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 986 478999999999999998876654
No 193
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.91 E-value=3.2e-23 Score=213.94 Aligned_cols=170 Identities=18% Similarity=0.114 Sum_probs=134.9
Q ss_pred CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH----HHHhcCCE
Q psy13922 52 SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA----SLAEFNME 127 (509)
Q Consensus 52 ~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~----~~~~~g~~ 127 (509)
..+..++|+.++++++ . ++++++++++++++.+++ +.++|| +|+++.|+|.+... .++..|++
T Consensus 54 ~~~~~~lr~~la~~~g------~--~~~i~~~sGt~a~~~al~-~~~~gd----~Vi~~~~~y~~~~~~~~~~~~~~G~~ 120 (393)
T 1n8p_A 54 NPNRENLERAVAALEN------A--QYGLAFSSGSATTATILQ-SLPQGS----HAVSIGDVYGGTHRYFTKVANAHGVE 120 (393)
T ss_dssp CHHHHHHHHHHHHHTT------C--SEEEEESCHHHHHHHHHH-TSCSSC----EEEEESSCCHHHHHHHHHTSTTTCSC
T ss_pred ChhHHHHHHHHHHHhC------C--CcEEEECChHHHHHHHHH-HcCCCC----EEEEeCCCchHHHHHHHHHHHHcCcE
Confidence 3456889999999983 1 245556666899999999 888888 99999999986554 34567999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC----CcEEEEcccCCcc
Q psy13922 128 QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE----KLFLFADEVYQDN 203 (509)
Q Consensus 128 ~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~----~i~lI~Deay~~~ 203 (509)
++.++.+ | +.|++++++ ++++|++++|+||||.+++ +++|+++|+++ |+++|+|++|..+
T Consensus 121 v~~v~~~-------d-~~l~~~i~~-----~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~ 184 (393)
T 1n8p_A 121 TSFTNDL-------L-NDLPQLIKE-----NTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSP 184 (393)
T ss_dssp CEEESSH-------H-HHHHHHSCS-----SEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHH
T ss_pred EEEeCCC-------h-HHHHHhccc-----CceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCcccc
Confidence 9988764 6 788888765 7999999999999999997 89999999999 9999999999987
Q ss_pred cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-EEEeeecCCHHHHHHHHHhhh
Q psy13922 204 VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG-GYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~-G~v~~~~~~~~~~~~l~~~~~ 269 (509)
.+. ... . .+ ..++++|+||.+ |.+|+|+ ||++. .++++++.+.....
T Consensus 185 ~~~---~~~---~----~~------~di~~~S~sK~~-g~~G~rigG~~~~--~~~~~~~~l~~~~~ 232 (393)
T 1n8p_A 185 YIS---NPL---N----FG------ADIVVHSATKYI-NGHSDVVLGVLAT--NNKPLYERLQFLQN 232 (393)
T ss_dssp HHC---CGG---G----GT------CSEEEEETTTTT-TCSSCCCCEEEEE--SCHHHHHHHHHHHH
T ss_pred ccC---CHH---H----cC------CeEEEEECcccc-cCCCCceeEEEEe--CCHHHHHHHHHHHH
Confidence 652 111 1 11 256788999999 7899999 98872 36889888876644
No 194
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.91 E-value=7e-24 Score=220.83 Aligned_cols=195 Identities=14% Similarity=0.079 Sum_probs=133.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH---hhcCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL---LIEDVDGK 103 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~---l~~~gd~~ 103 (509)
|+.+++++.++++. .....|. .++++++++.+.+.++ .+++|++|+|+++|+..+++. +.++ +
T Consensus 70 ~p~v~~a~~~~~~~---~~~~~~~-----~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea~~~al~~ar~~~~~-~-- 135 (424)
T 2e7u_A 70 HPKVLARVRETLER---GLTFGAP-----SPLEVALAKKVKRAYP---FVDLVRFVNSGTEATMSALRLARGYTGR-P-- 135 (424)
T ss_dssp CHHHHHHHHHHHHT---CSCCSSC-----CHHHHHHHHHHHHHCT---TCCEEEEESSHHHHHHHHHHHHHHHHCC-C--
T ss_pred CHHHHHHHHHHHHh---CCCCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHHHHHHHHHHhhCC-C--
Confidence 78999999999987 2222232 3455555555555543 468999999999999999986 5543 4
Q ss_pred CCeEEEcCCCChhHHHHHHh--------------cCC------EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEE
Q psy13922 104 KPGVLIPIPQYPLYSASLAE--------------FNM------EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIV 163 (509)
Q Consensus 104 ~~~Vlv~~p~y~~~~~~~~~--------------~g~------~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~iv 163 (509)
.|++..|+|+++...+.. .|. +++.++. .|++.|++.+++..+ ++++|+
T Consensus 136 --~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~--~~~~vi 204 (424)
T 2e7u_A 136 --YIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLKRRGE--EIAAII 204 (424)
T ss_dssp --EEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHGG--GEEEEE
T ss_pred --EEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHHhCCC--CEEEEE
Confidence 899999999986543321 121 2344432 389999999974211 455555
Q ss_pred EeCCCCC-CCCCC-CHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 164 IINPGNP-TGQVL-TKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 164 i~~p~NP-tG~~~-s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
+ +|+|+ ||.++ +++++++|.++ ++||++||+||+|.+| ..+ ..... +.. ...+ ++ .|+||.+
T Consensus 205 ~-ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g--~~~~~-~~~-~~~~-----di---~s~sK~l- 268 (424)
T 2e7u_A 205 F-EPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLA--FGGAT-ELL-GLKP-----DL---VTLGKIL- 268 (424)
T ss_dssp E-CSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSS--TTHHH-HHH-TCCC-----SE---EEECGGG-
T ss_pred E-eCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccc--hhHHH-HHh-CCCc-----ch---hhhhhhh-
Confidence 4 56554 89755 79999999999 9999999999999988 432 11111 111 1111 23 3889999
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
| +|+|+||++ .++++++.+..
T Consensus 269 ~-~G~~~G~~~---~~~~~~~~~~~ 289 (424)
T 2e7u_A 269 G-GGLPAAAYA---GRREIMEKVAP 289 (424)
T ss_dssp G-TTSSCEEEE---ECHHHHTTBTT
T ss_pred h-CCcceEEEE---EcHHHHhhhcc
Confidence 6 699999998 68888887765
No 195
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.91 E-value=7e-23 Score=209.03 Aligned_cols=198 Identities=20% Similarity=0.242 Sum_probs=156.7
Q ss_pred CCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-hcCCCC
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL-IEDVDG 102 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~ 102 (509)
|.+++.+++++.+.+.. . .|.+..+..++++.++++++ .+++++|+|+++|+..++..+ .++||
T Consensus 12 ~~~~~~v~~a~~~~~~~---~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd- 76 (367)
T 3nyt_A 12 ARIKDKIDAGIQRVLRH---G---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGD- 76 (367)
T ss_dssp HHHHHHHHHHHHHHHHH---C---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTC-
T ss_pred cccCHHHHHHHHHHHhc---C---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcC-
Confidence 34567788888888776 2 25567788999999999983 248999999999999999999 78888
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
.|+++.|+|..+...++..|++++.++.+++ ++.+|++.|++.+++ ++++|+ |+||+|...+ +++
T Consensus 77 ---~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~-----~~~~v~---~~~~~G~~~~---~~~ 141 (367)
T 3nyt_A 77 ---EVITPGFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITP-----RTKAII---PVSLYGQCAD---FDA 141 (367)
T ss_dssp ---EEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCT-----TEEEEC---CBCGGGCCCC---HHH
T ss_pred ---EEEECCCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCc-----CCcEEE---eeCCccChhh---HHH
Confidence 9999999999999999999999999998765 478899999998866 788887 8889998765 889
Q ss_pred HHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec--ccccCCCCCCeeEEEeeecCCHHH
Q psy13922 183 IIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC--SKGYMGECGLRGGYSEVINLDPGV 260 (509)
Q Consensus 183 l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~G~~Glr~G~v~~~~~~~~~ 260 (509)
|.++|+++|+++|+|++|+......+..... . . .+++.|| +|.+ |.+|. +|+++. .++++
T Consensus 142 i~~la~~~~~~li~D~a~~~g~~~~~~~~~~-------~------~-di~~~Sf~~~K~l-~~~g~-gg~~~~--~~~~l 203 (367)
T 3nyt_A 142 INAIASKYGIPVIEDAAQSFGASYKGKRSCN-------L------S-TVACTSFFPSAPL-GCYGD-GGAIFT--NDDEL 203 (367)
T ss_dssp HHHHHHHTTCCBEEECTTTTTCEETTEETTS-------S------S-SEEEEECCTTSSS-CCSSC-CEEEEE--SCHHH
T ss_pred HHHHHHHcCCEEEEECccccCCeECCeeccC-------C------C-CEEEEECCCCCcC-CCcCc-eeEEEe--CCHHH
Confidence 9999999999999999998643221111110 0 0 2445686 8999 65586 888863 67899
Q ss_pred HHHHHHhhh
Q psy13922 261 KAMLHKSIS 269 (509)
Q Consensus 261 ~~~l~~~~~ 269 (509)
.+.+.....
T Consensus 204 ~~~~~~~~~ 212 (367)
T 3nyt_A 204 ATAIRQIAR 212 (367)
T ss_dssp HHHHHHHTB
T ss_pred HHHHHHHHh
Confidence 988877654
No 196
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.91 E-value=1.2e-23 Score=219.30 Aligned_cols=204 Identities=11% Similarity=0.004 Sum_probs=128.9
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--CCCCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--DVDGKK 104 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~~~ 104 (509)
||.+++++.+++.+ .....|+ .....++++.+++++ + ..++|++|+|++++++.+++.... ..+
T Consensus 71 ~p~v~~A~~~~~~~---~~~~~~~-~~~~~~la~~l~~~~----~---~~~~v~~~~sGsea~~~al~~a~~~~~~~--- 136 (429)
T 4e77_A 71 HPAIRQAVIEAVER---GLSFGAP-TEMEVKMAQLVTDLV----P---TMDMVRMVNSGTEATMSAIRLARGYTGRD--- 136 (429)
T ss_dssp CHHHHHHHHHHHTT---CSCCSSC-CHHHHHHHHHHHHHS----T---TCSEEEEESSHHHHHHHHHHHHHHHHCCC---
T ss_pred CHHHHHHHHHHHHh---CcccCCC-CHHHHHHHHHHHhhC----C---CCCEEEEeCcHHHHHHHHHHHHHHhhCCC---
Confidence 79999999999987 2223243 333355666666554 3 468999999999999999986543 333
Q ss_pred CeEEEcCCCChhHHHHHHh-cC--CEEEEEecCCCC---------CC-CCCHHHHHHHHHhhhccCCceEEEEeCCCCCC
Q psy13922 105 PGVLIPIPQYPLYSASLAE-FN--MEQIGYYLDESK---------QW-GLPISELERSITEARKHCNPRAIVIINPGNPT 171 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~-~g--~~~~~v~~~~~~---------~~-~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt 171 (509)
.|++..+.|+++...+.. .+ ......+....- .+ ..|++.|++.+++.. .++++| +++|+|++
T Consensus 137 -~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--~~~~~v-i~ep~~~~ 212 (429)
T 4e77_A 137 -KIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYP--QEVACI-IVEPVAGN 212 (429)
T ss_dssp -EEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHST--TTEEEE-EECSSBCT
T ss_pred -EEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcC--CCEEEE-EECCccCC
Confidence 899999999987653221 11 111111111000 00 128999999998521 134444 45565555
Q ss_pred C-C-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeE
Q psy13922 172 G-Q-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGG 249 (509)
Q Consensus 172 G-~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G 249 (509)
| . ..+++.+++|.++|++||+++|+||+|.+| ..+. ....... +..+ + +.|+||.+ | +|+|+|
T Consensus 213 ~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~--~~~~~~~--~~~p-----d---i~t~sK~~-~-~G~~~G 277 (429)
T 4e77_A 213 MNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVAL--AGAQDYY--HVIP-----D---LTCLGKII-G-GGMPVG 277 (429)
T ss_dssp TSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBT--TCHHHHT--TCCC-----S---EEEEEGGG-G-TTSCCE
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCc--chHHHhc--CCCC-----C---eeeecccc-c-CCCCeE
Confidence 4 4 344667999999999999999999999988 4432 2222211 1111 1 34889999 5 799999
Q ss_pred EEeeecCCHHHHHHHHH
Q psy13922 250 YSEVINLDPGVKAMLHK 266 (509)
Q Consensus 250 ~v~~~~~~~~~~~~l~~ 266 (509)
|++ +++++++.+..
T Consensus 278 ~~~---~~~~~~~~l~~ 291 (429)
T 4e77_A 278 AFG---GRREVMNALAP 291 (429)
T ss_dssp EEE---ECHHHHTTBTT
T ss_pred EEE---ECHHHHHHhcc
Confidence 998 79999888765
No 197
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.91 E-value=2.6e-23 Score=213.34 Aligned_cols=321 Identities=12% Similarity=0.110 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH--HHHHhcC--CEEEEE
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS--ASLAEFN--MEQIGY 131 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~--~~~~~~g--~~~~~v 131 (509)
.++.+++++.+.+.+|.+ +.|++|+|++++++.++..+ .+|| +|+++.+.|+++. ..++..| .+++.+
T Consensus 34 ~~~~~~~~~~l~~~~~~~---~~v~~~~sgt~a~~~~~~~~-~~gd----~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 105 (379)
T 3ke3_A 34 QEVMNDLLSNLKTVYNAE---AAVIIPGSGTYGMEAVARQL-TIDE----DCLIIRNGWFSYRWTQILEKGKFAKSSTVL 105 (379)
T ss_dssp HHHHHHHHHHHHHHHTCS---EEEEEESCHHHHHHHHHHHH-CTTC----EEEEEECSHHHHHHHHHHHHHCCSSEEEEE
T ss_pred HHHHHHHHHHHHHHhCCC---CEEEEcCChhHHHHHHHHhC-CCCC----eEEEEeCCchhHHHHHHHHHhCCCCceEEE
Confidence 456666666666665633 68999999999999988655 5777 9999999998753 3455555 477777
Q ss_pred ecCCC------CCC-CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCccc
Q psy13922 132 YLDES------KQW-GLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204 (509)
Q Consensus 132 ~~~~~------~~~-~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~ 204 (509)
+.+.. ..| .+|++.+++.+++. ++++|++++++||||.+++.+++++|.++|+++|+++|+|+++. .
T Consensus 106 ~~~~~g~~~~~~~~~~~d~~~l~~~i~~~----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g- 179 (379)
T 3ke3_A 106 TAERTEDTEAPKPFAPVDIETAVAKIKED----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G- 179 (379)
T ss_dssp ECEESSCCSSCCCEECCCHHHHHHHHHHH----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T-
T ss_pred eccccccccccCCCCCCCHHHHHHHHhhc----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C-
Confidence 76431 111 47999999999653 79999999999999999999999999999999999999999986 2
Q ss_pred ccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhcccc
Q psy13922 205 YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQ 284 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 284 (509)
. ....+.... . .+++.|++|.+. .+.++|+++ .++++++.+.............
T Consensus 180 ---~-~~~~~~~~~---------~-d~~~~s~~K~l~--~~~g~g~~~---~~~~~~~~l~~~~~~~~~~~~~------- 233 (379)
T 3ke3_A 180 ---C-VWLDMKELG---------I-DVLISAPQKGWS--STPCAGLVM---LSAAAIKKVESTESNCFSLDLK------- 233 (379)
T ss_dssp ---T-CCCCHHHHT---------C-SEEEECTTTTTC--SCCCEEEEE---ECHHHHHHHHTCCCSCSTTCHH-------
T ss_pred ---C-ccccccccC---------C-CEEEecchhhcC--CCCceEEEE---ECHHHHHhhhcCCCCceeecHH-------
Confidence 1 223333221 1 244569999883 334588887 6889888876422100000000
Q ss_pred ccCCCCCchhHHHHHHHhhhcc------cCcccccchhhcccCCCCCCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Q psy13922 285 LFDDPRFPDDVKQRAQAVLDGC------RGQSVGQTVMDCVVNPPQPGEPSYEQFSRE-KQSVLDSLKQRAKMVADTFNS 357 (509)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~ 357 (509)
...+. ....+.+ +......+++..+++ ...+. ++.++++++++++++.+.|++
T Consensus 234 ---------~~~~~-~~~~~~g~~~~~~t~~~~~~~a~~aal~----------~~~~~g~~~~~~~~~~l~~~l~~~l~~ 293 (379)
T 3ke3_A 234 ---------QWLTI-MRAYENGGHAYHATMPTDSLRQFRDAIL----------EAKEIGFDILRDAQWELGNRVRKVLTD 293 (379)
T ss_dssp ---------HHHHH-HHHHHTTSCCCSSCCCHHHHHHHHHHHH----------HHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------HHHHH-HHhhhccCCCCCCCCCHHHHHHHHHHHH----------HHHHhcHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000000 111113334433322 12121 577888889999999999998
Q ss_pred CCCCeeccCC---ceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhh
Q psy13922 358 IEGMSCNPVQ---GAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYT 434 (509)
Q Consensus 358 ~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~ 434 (509)
+ |+++..+. ++....+.++-+ +.. ....|.++||.+.+|..|.....
T Consensus 294 ~-g~~~~~~~~~~~~~i~~~~~~~~--------------~~~-~~~~L~~~Gi~v~~g~~~~~~~~-------------- 343 (379)
T 3ke3_A 294 K-GIESVAAEGFEAPGVVVSYTERD--------------DMH-KGSAFAEAGLQIAAGVPLKVGEP-------------- 343 (379)
T ss_dssp T-TCCBSBCTTCBCSSEEEEECSCH--------------HHH-SSHHHHHTTCCCEECCCCSSCCC--------------
T ss_pred c-CCEecCCccccCceEEEEccCCc--------------chH-HHHHHHHCCeEEeCCcccccccc--------------
Confidence 8 88776443 333333222211 111 13556778999999886543000
Q ss_pred HHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHHHHHH
Q psy13922 435 QRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFHEEFL 505 (509)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~~~~~ 505 (509)
.+.+ ++|+|+. +++++|++++++|+++++++.
T Consensus 344 -------------------------------~~~~--------~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 344 -------------------------------DNFK--------TFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp -------------------------------TTCC--------EEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CcCC--------EEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 1122 8999987 899999999999999998765
No 198
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.91 E-value=2.2e-22 Score=214.25 Aligned_cols=355 Identities=10% Similarity=0.019 Sum_probs=230.3
Q ss_pred CCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEE---EeCCHHHHHHHHHHHhhcC-
Q psy13922 24 PRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVI---LSAGASDGIKSVLKLLIED- 99 (509)
Q Consensus 24 ~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~---~t~G~~~al~~~~~~l~~~- 99 (509)
.+.++.+.+++.+++.. ... .|....+..++++.+.+++.+.+|.+..+++++ +|+|+++++.+++.++..+
T Consensus 66 ~~~~~~v~~~l~~~~~~---~~~-~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~ 141 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINK---NYV-DMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKW 141 (502)
T ss_dssp CCCCHHHHHHHHHTTTC---BTT-CTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcc---CCC-ChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHH
Confidence 44578888888887766 222 244555678899999999988888765455543 5999999999998888654
Q ss_pred -------CCCC-CCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCC
Q psy13922 100 -------VDGK-KPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPT 171 (509)
Q Consensus 100 -------gd~~-~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPt 171 (509)
|++. ++.|+++.++|..+...++..|++++.++.+++ ++.+|++.|++++++ ++++|++++|+|||
T Consensus 142 ~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~-----~t~~v~~~~~~n~t 215 (502)
T 3hbx_A 142 QNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEG-YYVMDPQQAVDMVDE-----NTICVAAILGSTLN 215 (502)
T ss_dssp HHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTT-BCSCCHHHHHHHCCT-----TEEEEEEEBSCTTT
T ss_pred hHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCC-cCcCCHHHHHHHHhh-----CCEEEEEecCCCCC
Confidence 4311 237999999999999999999999999998753 478999999999987 79999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHC------CcEEEEcccCCcccc---cCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 172 GQVLTKENIQDIIKFAHRE------KLFLFADEVYQDNVY---AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 172 G~~~s~~~l~~l~~ia~~~------~i~lI~Deay~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
|.+.+ +++|.++|+++ |+++++|++|..+.. .+.... .+ . ..+.+++.+ |.+|.+.
T Consensus 216 G~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~-~~-------~--~~~~D~v~~-s~hK~l~- 280 (502)
T 3hbx_A 216 GEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DF-------R--LPLVKSINV-SGHKYGL- 280 (502)
T ss_dssp CCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCC-ST-------T--STTEEEEEE-ETTTTTC-
T ss_pred CcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccc-cc-------C--CCCceEEEE-CcccccC-
Confidence 99976 88889999998 999999999987642 111110 00 0 013345544 8899873
Q ss_pred CCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccc-hhhcccC
Q psy13922 243 ECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQT-VMDCVVN 321 (509)
Q Consensus 243 ~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-al~~~~~ 321 (509)
++.++||+++ .+++.+.........+...... ...+.-.+. ..+. .++. ++..+
T Consensus 281 -~p~g~G~~~~--~~~~~l~~~~~~~~~yl~~~~~-----~~~~~~sr~---~~~~------------~a~~~al~~l-- 335 (502)
T 3hbx_A 281 -VYAGIGWVIW--RNKEDLPEELIFHINYLGADQP-----TFTLNFSKG---SSQV------------IAQYYQLIRL-- 335 (502)
T ss_dssp -CCSSCEEEEE--SSGGGSCGGGCEEECSSSSCEE-----ECCSCCSCB---SHHH------------HHHHHHHHHH--
T ss_pred -CCCCeEEEEE--eCHHHhhHHhccCcccccCCCC-----CccccCCch---HHHH------------HHHHHHHHHH--
Confidence 6778898875 6665442221111111111000 000000000 0000 0111 11111
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccC--CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHH
Q psy13922 322 PPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPV--QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAF 399 (509)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 399 (509)
..+.+.+..+...++++++.+.|++++++++..+ ..+++ ++++.-.. ++ +... +.
T Consensus 336 -----------g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v-~f~~~~~~---------~~-~~~~-l~ 392 (502)
T 3hbx_A 336 -----------GHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLV-AFSLKDSS---------CH-TEFE-IS 392 (502)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEE-EEEESSCS---------SC-CHHH-HH
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEE-EEEecCCC---------cC-CHHH-HH
Confidence 1123567778888889999999999977888755 44444 43443100 11 1223 45
Q ss_pred HHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeE
Q psy13922 400 ELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHF 479 (509)
Q Consensus 400 ~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (509)
..|.++||.+........ ..+..++
T Consensus 393 ~~L~~~Gi~v~~~~~p~~-------------------------------------------------------~~~~~~l 417 (502)
T 3hbx_A 393 DMLRRYGWIVPAYTMPPN-------------------------------------------------------AQHITVL 417 (502)
T ss_dssp HHHHTTTCBCCEEECCTT-------------------------------------------------------CTTCEEE
T ss_pred HHHHhCCcEEeeccCCcc-------------------------------------------------------cCCceEE
Confidence 667778998753221111 1122389
Q ss_pred EEEee--cChHHHHHHHHHHHHHHHHHHh
Q psy13922 480 RTTIL--PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 480 Rls~~--~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
|+++. .+.++++.+++.|+++++++.+
T Consensus 418 Risv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 418 RVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99988 6889999999999998877654
No 199
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.91 E-value=1.2e-23 Score=221.05 Aligned_cols=326 Identities=10% Similarity=0.072 Sum_probs=201.1
Q ss_pred CHHHH-H-HHHH---HHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh---c
Q psy13922 27 PDDVK-Q-RAQA---VLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI---E 98 (509)
Q Consensus 27 p~~v~-~-a~~~---~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~---~ 98 (509)
||.|+ + ++.+ ++..... ....|. .....++++.+++++ + ....++|++|+|+++|++.+++.+. +
T Consensus 72 ~p~v~~~~A~~~~~~~~~~~~~-~~~~~~-~~~~~~la~~la~~~----~-~~~~~~v~~~~~gseA~~~aik~a~~~~~ 144 (449)
T 2cjg_A 72 PPALVDDREFHAELMQAALNKP-SNSDVY-SVAMARFVETFARVL----G-DPALPHLFFVEGGALAVENALKAAFDWKS 144 (449)
T ss_dssp CHHHHTCHHHHHHHHHHHTCCC-CTTTCC-CHHHHHHHHHHHHHH----C-CTTCCEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCC-CCcccC-CHHHHHHHHHHHHhc----C-CCCCCEEEEeCchHHHHHHHHHHHHHHhc
Confidence 78999 8 9988 6665211 011232 222345555555555 3 2357899999999999999998654 2
Q ss_pred -CC------CCCCCeEEEcCCCChhHHHHHHhc---------CC-----EEEEEecCCCCCC--------CCCHHHHHHH
Q psy13922 99 -DV------DGKKPGVLIPIPQYPLYSASLAEF---------NM-----EQIGYYLDESKQW--------GLPISELERS 149 (509)
Q Consensus 99 -~g------d~~~~~Vlv~~p~y~~~~~~~~~~---------g~-----~~~~v~~~~~~~~--------~~d~~~L~~~ 149 (509)
++ .++++.|++..|.|+++...+... +. .+..+|.++.+.. ..+++.|++.
T Consensus 145 ~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~ 224 (449)
T 2cjg_A 145 RHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAA 224 (449)
T ss_dssp HHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHH
Confidence 10 001339999999999865532221 22 4555554331000 1345668888
Q ss_pred HHhhhccCCceEEEEeCCCCCCC-CCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCc
Q psy13922 150 ITEARKHCNPRAIVIINPGNPTG-QVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSM 228 (509)
Q Consensus 150 i~~~~~~~~~~~ivi~~p~NPtG-~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (509)
+++.. .++++|+++.++||+| ..++++++++|.++|++||+++|+||+|.++.+.+. +.++... ++..
T Consensus 225 i~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~--~~~~~~~--~~~~----- 293 (449)
T 2cjg_A 225 FETRP--HDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT--AWAYQQL--DVAP----- 293 (449)
T ss_dssp HHHST--TTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSTHHHH--TCCC-----
T ss_pred HHhcC--CceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc--ceeeccc--CCCc-----
Confidence 86311 1677877776689999 599999999999999999999999999998876542 2222221 1211
Q ss_pred eeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHH-----hhh-cccCcchhhhhccccccCCCCCchhHHHHHHHh
Q psy13922 229 ELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHK-----SIS-AMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAV 302 (509)
Q Consensus 229 ~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (509)
++ .|+||.+ |+||++ .++++++.+.. ... .+.+.+.+
T Consensus 294 di---~t~sK~l------~iG~~~---~~~~~~~~l~~~~~~~~~~~~t~~~n~~------------------------- 336 (449)
T 2cjg_A 294 DI---VAFGKKT------QVCGVM---AGRRVDEVADNVFAVPSRLNSTWGGNLT------------------------- 336 (449)
T ss_dssp SE---EEECGGG------SSEEEE---ECGGGGGSTTCTTTSTTSSCCSSSSCHH-------------------------
T ss_pred eE---EEecCcc------cEEEEE---ECHHHhhhhhhcccCCcccccCCCCCHH-------------------------
Confidence 23 3789965 789998 57788775321 111 23344444
Q ss_pred hhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCC-CeeccCCceeEEeecCC
Q psy13922 303 LDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS----IEG-MSCNPVQGAMYAFPQMK 377 (509)
Q Consensus 303 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~g-~~~~~~~~g~~~~~~~~ 377 (509)
++++...+++ ... -+.+.+.++++++++.+.|++ .|. +....+.|.++ ++++.
T Consensus 337 ---------~~~aa~aal~----------~~~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~-~~~~~ 394 (449)
T 2cjg_A 337 ---------DMVRARRILE----------VIE--AEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMC-AFSLP 394 (449)
T ss_dssp ---------HHHHHHHHHH----------HHH--HHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEE-EEECS
T ss_pred ---------HHHHHHHHHH----------HHH--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEE-EEEEC
Confidence 3333322221 111 123455666666777776664 344 55556666655 45664
Q ss_pred CCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhh
Q psy13922 378 LPAKAIAKAKAEGKCPSVLYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESL 457 (509)
Q Consensus 378 ~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (509)
-.. ....++..++ ++||.+.|+.
T Consensus 395 ~~~------------~~~~~~~~l~-~~Gv~v~~~g-------------------------------------------- 417 (449)
T 2cjg_A 395 TTA------------DRDELIRQLW-QRAVIVLPAG-------------------------------------------- 417 (449)
T ss_dssp SHH------------HHHHHHHHHH-HTTEECEEET--------------------------------------------
T ss_pred ChH------------HHHHHHHHHH-HCCeEEecCC--------------------------------------------
Confidence 211 1234445555 6799998742
Q ss_pred hcccccccCCCCCCCCCCceeEEEEe--ecChHHHHHHHHHHHHHHHHH
Q psy13922 458 ERTGICIVPGAGFGQVPGTYHFRTTI--LPQPEKLKAMLEKFREFHEEF 504 (509)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~Rls~--~~~~~~i~~~~~~l~~~~~~~ 504 (509)
.+ ++|+++ +.++++|++++++|+++++++
T Consensus 418 --------~~----------~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 418 --------AD----------TVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp --------TT----------EEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --------CC----------EEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 12 899954 589999999999999998754
No 200
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.91 E-value=4.9e-22 Score=204.75 Aligned_cols=176 Identities=17% Similarity=0.154 Sum_probs=140.8
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH----H
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS----L 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~----~ 121 (509)
+++|+ .....++++.++++++ .+++++++++++++..+++++.++|| +|+++.|+|.++... +
T Consensus 53 y~~~~-~~~~~~l~~~la~~~g--------~~~~i~~~sG~~ai~~~~~~~~~~gd----~vl~~~~~y~~~~~~~~~~~ 119 (389)
T 3acz_A 53 YSRLG-NPTVEQFEEMVCSIEG--------AAGSAAFGSGMGAISSSTLAFLQKGD----HLIAGDTLYGCTVSLFTHWL 119 (389)
T ss_dssp BTTTC-CHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHTTTCCTTC----EEEEESSCCHHHHHHHHHHH
T ss_pred cCCCC-ChHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCC----EEEEeCCCchHHHHHHHHHH
Confidence 34343 4456789999999883 12666777778999999999988888 999999999987665 5
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ 201 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~ 201 (509)
+..|.+++.++. .|++.+++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.
T Consensus 120 ~~~g~~~~~v~~-------~d~~~l~~~i~~-----~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~ 184 (389)
T 3acz_A 120 PRFGIEVDLIDT-------SDVEKVKAAWKP-----NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFT 184 (389)
T ss_dssp HHTTCEEEEECT-------TCHHHHHHTCCT-----TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTT
T ss_pred HHcCCEEEEECC-------CCHHHHHHhcCC-----CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCc
Confidence 778999999875 378999998876 7999999999999999987 8999999999999999999998
Q ss_pred cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-EEEeeecCCH-HHHHHHHHhhh
Q psy13922 202 DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG-GYSEVINLDP-GVKAMLHKSIS 269 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~-G~v~~~~~~~-~~~~~l~~~~~ 269 (509)
.+... .++ +.+ ..++++|+||.+ |.+|.|+ ||++ .++ ++++.+.....
T Consensus 185 ~~~~~-----~~~-----~~~------~di~~~S~sK~~-~~~~~~~~G~v~---~~~~~~~~~l~~~~~ 234 (389)
T 3acz_A 185 SPCFL-----KPL-----ELG------ADIALHSVSKYI-NGHGDVIGGVSS---AKTAEDIATIKFYRK 234 (389)
T ss_dssp CTTTC-----CGG-----GTT------CSEEEEETTTTT-TCSSCCCCEEEE---ESSHHHHHHHHHHHH
T ss_pred ccccc-----Ccc-----ccC------CeEEEECChhhc-cCCCCceeEEEE---ECcHHHHHHHHHHHH
Confidence 76532 111 111 256688999999 6799998 9997 455 88888877654
No 201
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.90 E-value=2.2e-22 Score=206.54 Aligned_cols=203 Identities=13% Similarity=0.148 Sum_probs=156.2
Q ss_pred CCCCCC--CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHH-HHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-
Q psy13922 21 FDDPRF--PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHV-AQYISRRDGQPADWQDVILSAGASDGIKSVLKLL- 96 (509)
Q Consensus 21 ~~~~~~--p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~v-a~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l- 96 (509)
++.|+| |+.+++++.+.+++ +.+..|++ ...++++++ +++++ ..+++++++|+++++..++..+
T Consensus 7 ~~~p~~~~~~~i~~a~~~~~~~---~~~~~~~~--~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~ 74 (377)
T 3ju7_A 7 FLRASTVPVIEYLDELKEIDAS---HIYTNYGP--INQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKK 74 (377)
T ss_dssp SCCCCCCCGGGGHHHHHHHHHH---TCCSSSCH--HHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHS
T ss_pred ccCCCCCCcHHHHHHHHHHHHc---CCcccCCH--HHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcC
Confidence 467888 46789999999988 44433443 458899999 99883 2567999999999999999998
Q ss_pred hcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCC--ceEEEEeCCCCCCCCC
Q psy13922 97 IEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCN--PRAIVIINPGNPTGQV 174 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~--~~~ivi~~p~NPtG~~ 174 (509)
.++|| +|+++.|+|..+...+...|++++.++++++ +|.+|++.+++++... + +++|+ |+||+|..
T Consensus 75 ~~~Gd----~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~~i~~~----~~~tk~v~---~~~~~G~~ 142 (377)
T 3ju7_A 75 RKKGK----YALMPSFTFPATPLAAIWCGLEPYFIDISID-DWYMDKTVLWDKIEEL----KEEVAIVV---PYATFGSW 142 (377)
T ss_dssp CTTCC----EEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHHHHH----GGGEEEEC---CBCGGGBC
T ss_pred CCCcC----EEEECCCCcHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHHHhcC----CCCceEEE---EECCCCCc
Confidence 88998 9999999999999999999999999998754 5789999999998432 5 88877 77899998
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEec--ccccCCCCCCeeEEEe
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSC--SKGYMGECGLRGGYSE 252 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~G~~Glr~G~v~ 252 (509)
.+ +++|.++|+ +|++||+|++|.......+ ..+ +.. .. -+.+.|| +|.+ | +| +.|+++
T Consensus 143 ~~---~~~i~~la~-~~~~vi~D~a~a~g~~~~~---~~~-------g~~--~~-d~~~~S~~~~K~l-~-~g-~gG~~~ 202 (377)
T 3ju7_A 143 MN---LEEYEELEK-KGVPVVVDAAPGFGLMNGG---MHY-------GQD--FS-GMIIYSFHATKPF-G-IG-EGGLIY 202 (377)
T ss_dssp CC---CHHHHHHHH-TTCCBEEECTTCTTCEETT---EET-------TTT--CS-SEEEEECBTTSSS-C-CB-SCEEEE
T ss_pred cC---HHHHHHHHh-cCCEEEEECCCccCCeECC---Eec-------cCC--CC-cEEEEECCCCCcC-C-CC-CcEEEE
Confidence 77 788899999 9999999999986543211 110 000 00 1234454 6999 5 46 577775
Q ss_pred eecCCHHHHHHHHHhhh
Q psy13922 253 VINLDPGVKAMLHKSIS 269 (509)
Q Consensus 253 ~~~~~~~~~~~l~~~~~ 269 (509)
+ .++++.++++.++.
T Consensus 203 ~--~~~~l~~~~~~~~~ 217 (377)
T 3ju7_A 203 S--KNEEDIQRIKRMGN 217 (377)
T ss_dssp E--SCHHHHHHHHHHTB
T ss_pred E--CCHHHHHHHHHHHh
Confidence 4 78999998887765
No 202
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.90 E-value=1.3e-21 Score=203.94 Aligned_cols=157 Identities=16% Similarity=0.144 Sum_probs=125.2
Q ss_pred CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH----HHHhcCCE
Q psy13922 52 SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA----SLAEFNME 127 (509)
Q Consensus 52 ~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~----~~~~~g~~ 127 (509)
.....++++.++++++ .+..++++++++|+..++++++++|| +|+++.|+|.++.. .++..|.+
T Consensus 81 ~p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~Gd----~Vi~~~~~y~~~~~~~~~~~~~~G~~ 148 (430)
T 3ri6_A 81 NPTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAGD----SVVTTDRLFGHTLSLFQKTLPSFGIE 148 (430)
T ss_dssp CHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTC----EEEEETTCCHHHHHHHHTHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCCC----EEEEcCCCchhHHHHHHHHHHHcCCE
Confidence 3455788888888873 23466666778999999999999998 99999999998877 66788999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccC
Q psy13922 128 QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207 (509)
Q Consensus 128 ~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~ 207 (509)
++.++.+ |++.|++++++ ++++|++++|+||+|.+++ +++|+++|+++|+++|+|++|....+.
T Consensus 149 ~~~v~~~-------d~~~l~~ai~~-----~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~- 212 (430)
T 3ri6_A 149 VRFVDVM-------DSLAVEHACDE-----TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL- 212 (430)
T ss_dssp EEEECTT-------CHHHHHHHCCT-----TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC-
T ss_pred EEEeCCC-------CHHHHHHhhCC-----CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC-
Confidence 9998865 79999999876 7999999999999999987 889999999999999999999864431
Q ss_pred CCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 208 GSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
.+. +.+ ..++++|+||.+ |.+|..+|.++
T Consensus 213 ----~~~-----~~g------~div~~S~sK~l-~g~g~~~gG~v 241 (430)
T 3ri6_A 213 ----EAK-----RLG------VDIEVLSSTKFI-SGGGTSVGGVL 241 (430)
T ss_dssp ----CGG-----GGT------CSEEEEECCCEE-ETTEEECCEEE
T ss_pred ----ChH-----HcC------CEEEEECCcccc-cCCCCceEEEE
Confidence 111 111 146688999999 44666556555
No 203
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.90 E-value=1.5e-21 Score=207.86 Aligned_cols=283 Identities=13% Similarity=0.040 Sum_probs=185.2
Q ss_pred cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--------CCCC-CCC-eEEEcCCCChhH
Q psy13922 48 SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--------DVDG-KKP-GVLIPIPQYPLY 117 (509)
Q Consensus 48 ~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--------~gd~-~~~-~Vlv~~p~y~~~ 117 (509)
.|....+..++++.+.+++.+.+|.+.+.+++++|+|+++++.+++.+++. +|.. ..+ .|+++.+.|.++
T Consensus 123 ~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~ 202 (504)
T 2okj_A 123 TYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI 202 (504)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred chhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHH
Confidence 377667778889999888888888654478999999999999999998863 3400 012 688899999999
Q ss_pred HHHHHhcCC---EEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcE
Q psy13922 118 SASLAEFNM---EQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLF 193 (509)
Q Consensus 118 ~~~~~~~g~---~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~ 193 (509)
...++..|. +++.+|.++ ++.+|++.|++.+++.... .++++|++++|+||||.+.+ +++|+++|+++|++
T Consensus 203 ~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g~~ 277 (504)
T 2okj_A 203 KKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNLW 277 (504)
T ss_dssp HHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHTCE
T ss_pred HHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCE
Confidence 999988877 899999864 4689999999999763221 24789999999999999865 89999999999999
Q ss_pred EEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccC
Q psy13922 194 LFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLC 273 (509)
Q Consensus 194 lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~ 273 (509)
+++|++|+.+.+... .+... ...+. ..++++ .|++|.+ |.| .++|++++ .+++++.........+..
T Consensus 278 lhvD~a~~~~~~~~~-~~~~~---~~g~~----~~D~i~-~~~hK~~-~~p-~~~g~l~~--~~~~~~~~~~~~~~~~l~ 344 (504)
T 2okj_A 278 LHVDAAWGGGLLMSR-KHRHK---LNGIE----RANSVT-WNPHKMM-GVL-LQCSAILV--KEKGILQGCNQMCAGYLF 344 (504)
T ss_dssp EEEEETTGGGGGGCT-TTGGG---GTTGG----GCSEEE-ECTTSTT-CCC-SCCEEEEE--SSTTHHHHHHCCCCSSSC
T ss_pred EEEehhhhhHHHhCH-hhHhh---cCCcc----cCCEEE-ECchhhc-CCC-cceEEEEE--ECHHHHHHHhcCCCcccc
Confidence 999999998775321 11111 11110 223554 4889999 544 68999985 565665543221111110
Q ss_pred -cchhhhhccccccCCCCCchhHHHHHHHhhhcccC-cccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q psy13922 274 -PTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRG-QSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMV 351 (509)
Q Consensus 274 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 351 (509)
..... .... .+.++. +..+.+ ....+.++-.. +. .+.++++.+...++++++
T Consensus 345 ~~~~~~-~~~~------~~~~~~-------~~~~rr~~~l~~~a~l~~----------lg--~~g~~~~~~~~~~~a~~l 398 (504)
T 2okj_A 345 QPDKQY-DVSY------DTGDKA-------IQCGRHVDIFKFWLMWKA----------KG--TVGFENQINKCLELAEYL 398 (504)
T ss_dssp CSCCSS-CGGG------CCGGGS-------SCSSCBCCHHHHHHHHHH----------HH--HHHHHHHHHHHHHHHHHH
T ss_pred CCcccc-cCcC------CcccCC-------CCCCCCccHHHHHHHHHH----------hh--HHHHHHHHHHHHHHHHHH
Confidence 00000 0000 000000 000000 00011111111 11 233677888899999999
Q ss_pred HHHHhcCCCCeecc---CCceeEEee
Q psy13922 352 ADTFNSIEGMSCNP---VQGAMYAFP 374 (509)
Q Consensus 352 ~~~L~~~~g~~~~~---~~~g~~~~~ 374 (509)
.+.|+++|++++.. +..+++.|.
T Consensus 399 ~~~L~~~~~~~~~~~~~p~~~~v~f~ 424 (504)
T 2okj_A 399 YAKIKNREEFEMVFNGEPEHTNVCFW 424 (504)
T ss_dssp HHHHTTCTTEEESSSSCCSSSCEEEE
T ss_pred HHHHhcCCCEEEEecCCCCeEEEEEE
Confidence 99999988998874 667776653
No 204
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.90 E-value=1.7e-21 Score=207.80 Aligned_cols=299 Identities=12% Similarity=0.021 Sum_probs=195.6
Q ss_pred HHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC--------C
Q psy13922 29 DVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED--------V 100 (509)
Q Consensus 29 ~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--------g 100 (509)
.+.+.+..++.. .. ..|....+..++++++++++.+.+|++...+.+++|+|+++++..++.++++. |
T Consensus 111 ~~~e~l~~~~~~---~~-~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G 186 (511)
T 3vp6_A 111 LAGEWLTSTANT---NM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG 186 (511)
T ss_dssp HHHHHHHHHHCC---CS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred HHHHHHHHHhcc---CC-CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence 344555555544 33 34888888899999999999999997766789999999999999988887651 1
Q ss_pred C--CCCCeEEEcCCCChhHHHHHHhcCC---EEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCC
Q psy13922 101 D--GKKPGVLIPIPQYPLYSASLAEFNM---EQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 101 d--~~~~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~ 174 (509)
. ..+..|+++.++|.++...++.+|. +++.++.+++ +.+|++.|++.|++.... ..+++|+++.|+||+|.+
T Consensus 187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~--~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v 264 (511)
T 3vp6_A 187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNER--GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF 264 (511)
T ss_dssp GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB
T ss_pred cccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCC--CccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc
Confidence 0 0123899999999999999999998 8999998753 689999999999874221 237889999999999999
Q ss_pred CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeee
Q psy13922 175 LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVI 254 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~ 254 (509)
- ++++|+++|++||+++++|++|+....... .+... .... ...+++++ +.+|.+ |.| ...|++++
T Consensus 265 d---~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~-~~~~~---~~g~----~~aDsv~~-~~hK~l-~~p-~g~g~l~~- 329 (511)
T 3vp6_A 265 D---PIQEIADICEKYNLWLHVDAAWGGGLLMSR-KHRHK---LNGI----ERANSVTW-NPHKMM-GVL-LQCSAILV- 329 (511)
T ss_dssp C---CHHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGG---GTTG----GGCSEEEE-CTTSTT-CCC-SCCEEEEE-
T ss_pred c---cHHHHHHHHHHcCCEEEEEccchhhHhhCh-hhhhh---ccCC----ccCCEEEE-Cccccc-CCC-cCeEEEEE-
Confidence 4 499999999999999999999988655321 11111 1100 01235654 899998 544 66788765
Q ss_pred cCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHH
Q psy13922 255 NLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFS 334 (509)
Q Consensus 255 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~ 334 (509)
.++.+..........+........... ..+.+ ..+..+.+. ....+..++. ....
T Consensus 330 -~~~~~~~~~~~~~~~yl~~~~~~~~~~------~~~~~-------~~~~~~r~~--~al~~~~al~---------~~g~ 384 (511)
T 3vp6_A 330 -KEKGILQGCNQMHASYLFQQDKHYDVS------YDTGD-------KAIQCGRHV--DIFKFWLMWK---------AKGT 384 (511)
T ss_dssp -SSTTHHHHHHCCCCTTTCCSSCSSCGG------GCCGG-------GSSCSSCCC--CHHHHHHHHH---------HHHH
T ss_pred -eCHHHHHHHhccCCccccCcccccccc------cCccC-------CCCCCCCch--HHHHHHHHHH---------HHhH
Confidence 777766554322111111000000000 00000 000000000 0011111111 0122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeecc---CCceeEEe
Q psy13922 335 REKQSVLDSLKQRAKMVADTFNSIEGMSCNP---VQGAMYAF 373 (509)
Q Consensus 335 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~---~~~g~~~~ 373 (509)
++++++.+...++.+++.+.|+++||+++.. +..+.+.|
T Consensus 385 ~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f 426 (511)
T 3vp6_A 385 VGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCF 426 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEE
Confidence 3578889999999999999999999999865 56666554
No 205
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.89 E-value=9.4e-22 Score=209.14 Aligned_cols=359 Identities=15% Similarity=0.131 Sum_probs=223.8
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh----h
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL----I 97 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l----~ 97 (509)
..+..|+.+++++...... .....|....+..++++++.+++.+.+|.+ ..+++++|+|+++++..++.++ .
T Consensus 108 ~~~~~~~~v~~~~~~~~~n---~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~ 183 (497)
T 2qma_A 108 HTPPLMPAVAAEAMIAALN---QSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIA 183 (497)
T ss_dssp CCCCBHHHHHHHHHHHHHC---CCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHhhc---ccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHH
Confidence 4556677888887655544 223336665677888999888888887754 2378999999999999999884 2
Q ss_pred ---------cCCCCC--CC-eEEEcCCCChhHHHHHHhcCC---EEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceE
Q psy13922 98 ---------EDVDGK--KP-GVLIPIPQYPLYSASLAEFNM---EQIGYYLDESKQWGLPISELERSITEARKH-CNPRA 161 (509)
Q Consensus 98 ---------~~gd~~--~~-~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ 161 (509)
.+|.+. ++ .|+++.+.|.++...+...|. +++.+|.++ ++.+|++.|++.+++.... .++.+
T Consensus 184 ~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~ 261 (497)
T 2qma_A 184 DKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGLIPFA 261 (497)
T ss_dssp HHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTCEEEE
T ss_pred HhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCCcceE
Confidence 122111 23 688899999999999888876 799999864 4689999999999863211 12447
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 162 IVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 162 ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
|+++.++||||...+ +++|+++|++||+++++|++|+.+..... +.. ....+ +..+++ +.|++|.+
T Consensus 262 vv~~~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~--~~~---~~~gi----~~~D~i-~~s~hK~l- 327 (497)
T 2qma_A 262 IVGTAGTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS--HKS---RLKGV----ERAHSI-SVDFHKLF- 327 (497)
T ss_dssp EEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST--TGG---GGTTG----GGCSEE-EEETTTTT-
T ss_pred EEEcCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc--chH---hhcCc----ccCCEE-EEcchhcc-
Confidence 788999999999855 89999999999999999999998765421 111 11111 022355 44899998
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccC-cccccc-hhhcc
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRG-QSVGQT-VMDCV 319 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-al~~~ 319 (509)
+.| .++|++++ .++..++.+... ..+...... .... ... ..+..+.+ ..+.+. ++..+
T Consensus 328 ~~p-~~~G~l~~--~~~~~~~~~~~~-~~yl~~~~~---~~~~----------~~~---~~~~~~r~~~al~~~~~l~~l 387 (497)
T 2qma_A 328 YQT-ISCGALLV--NDKSNFKFLLHH-ADYLNREHD---ELPN----------LVD---KSIATTKRFDALKVFMTMQNV 387 (497)
T ss_dssp CCC-SSCEEEEE--SCGGGGGGGCC-------------------------------------CCSCCCTHHHHHHHHHHT
T ss_pred CCC-cceEEEEE--eCHHHHHHhcCC-chhcCCccc---cCCC----------ccc---cCCCCCCchhHHHHHHHHHHh
Confidence 544 68999975 666544333110 001000000 0000 000 00000000 000111 11111
Q ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeec-cCCceeEEeecCCCCHHHHHHHhhcCCCC---cH
Q psy13922 320 VNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCN-PVQGAMYAFPQMKLPAKAIAKAKAEGKCP---SV 395 (509)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~---~~ 395 (509)
. .+.++++.+...++++++.+.|+++|+++++ ++.++++.| ++.-. +... ..
T Consensus 388 -g------------~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~----------~~~~~~l~~ 443 (497)
T 2qma_A 388 -G------------PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLF-RATHE----------TADLDELNK 443 (497)
T ss_dssp -C------------HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEE-EECCS----------SSCHHHHHH
T ss_pred -C------------HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEE-EEcCC----------ccCHHHHHH
Confidence 1 1236677888889999999999998898875 566665443 44311 0000 11
Q ss_pred HHHHHHHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCC
Q psy13922 396 LYAFELLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPG 475 (509)
Q Consensus 396 ~~~~~ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (509)
. +...+.+.|+.+.++..+ .+
T Consensus 444 ~-l~~~l~~~G~~~~~~~~~--------------------------------------------------~g-------- 464 (497)
T 2qma_A 444 A-LRLEALTRGIAVLGETIV--------------------------------------------------DG-------- 464 (497)
T ss_dssp H-HHHHHHHHTSCBCEEEEE--------------------------------------------------TT--------
T ss_pred H-HHHHHHhCCCEEEEeeEE--------------------------------------------------CC--------
Confidence 2 234555678877643211 11
Q ss_pred ceeEEEEee---cChHHHHHHHHHHHHHHHH
Q psy13922 476 TYHFRTTIL---PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 476 ~~~~Rls~~---~~~~~i~~~~~~l~~~~~~ 503 (509)
..++|+++. ++++++++++++|++++++
T Consensus 465 ~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 465 KTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp EEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 228999983 7999999999999998765
No 206
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.89 E-value=1.4e-21 Score=204.29 Aligned_cols=197 Identities=15% Similarity=0.136 Sum_probs=152.4
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh-----
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL----- 96 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l----- 96 (509)
+.|.+++.+++++.+++.. .. |.+..+..+++++++++++ .+++++++++++++..+++++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~---~~---~~~~~~~~~l~~~la~~~g--------~~~~i~~~sGt~a~~~al~~l~~~~~ 102 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLD---GW---LTTGRFNDAFEKKLGEYLG--------VPYVLTTTSGSSANLLALTALTSPKL 102 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHH---CC---CBSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCGGG
T ss_pred CCCCCCHHHHHHHHHHHHc---CC---cCCChHHHHHHHHHHHHHC--------CCcEEEeCCHHHHHHHHHHHhhhccc
Confidence 6788889999999988876 22 4556688999999999993 126788888889999999998
Q ss_pred ----hcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe-CCCCCC
Q psy13922 97 ----IEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII-NPGNPT 171 (509)
Q Consensus 97 ----~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~-~p~NPt 171 (509)
.++|+ .|+++.|+|..+...++..|++++.++.+++ ++.+|++.|++.+++ ++++|+++ +|+||
T Consensus 103 ~~~~~~~gd----~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~-----~~~~v~~~~~~g~~- 171 (437)
T 3bb8_A 103 GVRALKPGD----EVITVAAGFPTTVNPTIQNGLIPVFVDVDIP-TYNVNASLIEAAVSD-----KTKAIMIAHTLGNL- 171 (437)
T ss_dssp GGGSCCTTC----EEEECSSSCHHHHHHHHHTTCEEEECCEETT-TTEECGGGHHHHCCT-----TEEEEEEECGGGCC-
T ss_pred ccccCCCcC----EEEECCCCcHHHHHHHHHcCCEEEEEeccCc-cCCcCHHHHHHhcCC-----CCeEEEEeCCCCCh-
Confidence 66777 9999999999999999999999999988753 468899999999876 79999987 46666
Q ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEE
Q psy13922 172 GQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYS 251 (509)
Q Consensus 172 G~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v 251 (509)
.++++|.++|+++|+++|+|++|..+..... . . .+. ..+ +++.||+|.+ +++|.++|++
T Consensus 172 ------~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~--~-------~~~---~~d-~~~~s~~~~k-~l~~g~gg~~ 230 (437)
T 3bb8_A 172 ------FDLAEVRRVADKYNLWLIEDCCDALGSTYDG-K--M-------AGT---FGD-IGTVSFYPAK-HITMGEGGAV 230 (437)
T ss_dssp ------CCHHHHHHHHHHHTCEEEEECTTCTTCEETT-E--E-------TTS---SSS-EEEEECSTTS-SSCCSSCEEE
T ss_pred ------hcHHHHHHHHHHcCCEEEEECccccCceECC-e--e-------ccc---ccC-EEEEECcCCc-CCCCCCeEEE
Confidence 4599999999999999999999985432211 1 1 110 112 4456998888 6899999999
Q ss_pred eeecCCHHHHHHHHH
Q psy13922 252 EVINLDPGVKAMLHK 266 (509)
Q Consensus 252 ~~~~~~~~~~~~l~~ 266 (509)
+. .++.+...+..
T Consensus 231 ~~--~~~~~~~~~~~ 243 (437)
T 3bb8_A 231 FT--QSAELKSIIES 243 (437)
T ss_dssp EE--SCHHHHHHHHH
T ss_pred Ee--CCHHHHHHHHH
Confidence 72 33444544443
No 207
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.88 E-value=3e-21 Score=204.43 Aligned_cols=363 Identities=12% Similarity=0.057 Sum_probs=227.0
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC--------CcEEEeCCHHHHHHHHHHHhh
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW--------QDVILSAGASDGIKSVLKLLI 97 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~--------~~i~~t~G~~~al~~~~~~l~ 97 (509)
.|..+.+.+..++.. . ...|....+..++++.+++++.+.+|.+... ...++|+|+|+++..++.+.+
T Consensus 91 ~~~~~~~~~~~~~n~---~-~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar 166 (481)
T 4e1o_A 91 WPSLLGDMLADAINC---L-GFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAAR 166 (481)
T ss_dssp HHHHHHHHHHHHHCC---C-CSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc---c-cCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHH
Confidence 344555555666554 3 3348888899999999999999998865332 367999999999988888775
Q ss_pred cC--------CC-------CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceE
Q psy13922 98 ED--------VD-------GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRA 161 (509)
Q Consensus 98 ~~--------gd-------~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ 161 (509)
+. +. .++..|+++.++|.++...+...|.+++.+|.++ ++.+|++.|+++|++.... ..+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~--~~~~d~~~Le~~i~~~~~~g~~~~~ 244 (481)
T 4e1o_A 167 KNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDD--NFSLRGEALQKAIEEDKQRGLVPVF 244 (481)
T ss_dssp HHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcCC--CCcCCHHHHHHHHHHHHhCCCCcEE
Confidence 31 00 0123889999999999999999999999999864 4689999999999864221 22677
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 162 IVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 162 ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
|+++.++|++|.+-+ +++|+++|++||+++++|++|.....-.. .+... ...+. ..+++++ +.+|.+
T Consensus 245 vv~~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~-~~~~~---~~gi~----~aDsi~~-~~hK~l- 311 (481)
T 4e1o_A 245 VCATLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCP-EFRGF---LKGIE----YADSFTF-NPSKWM- 311 (481)
T ss_dssp EEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSG-GGGGG---GTTGG----GCSEEEE-CHHHHS-
T ss_pred EEEecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhCh-hhHHH---hcCcc----cCCEEEE-ChHHhc-
Confidence 788999999998844 99999999999999999999987643221 11111 11110 1236655 889998
Q ss_pred CCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccC
Q psy13922 242 GECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVN 321 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 321 (509)
+.| ...|++++ .++............+......+ .. +.+.++ .+..+++. ....+...+.
T Consensus 312 ~~p-~g~g~l~~--~~~~~l~~~~~~~~~yl~~~~~~--~~------~~~~~~-------~~~~~r~~--~~l~~~~al~ 371 (481)
T 4e1o_A 312 MVH-FDCTGFWV--KDKYKLQQTFSVNPIYLRHANSG--VA------TDFMHW-------QIPLSRRF--RSVKLWFVIR 371 (481)
T ss_dssp SCC-SSCEEEEE--SBHHHHHTTTCCCCGGGCCTTTT--TS------CCGGGG-------SSSSCCCC--THHHHHHHHH
T ss_pred CCC-CceEEEEE--eCHHHHHHHhcCCchhccCcccC--CC------CCcccc-------cccCCCCc--cHHHHHHHHH
Confidence 444 34566654 67765432211111111000000 00 000000 00111100 0001111110
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHH
Q psy13922 322 PPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFEL 401 (509)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 401 (509)
....+.++++.+...++++++.+.|+++|++++..+....++++++.-... ....+..++
T Consensus 372 ---------~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~-----------~~~~l~~~L 431 (481)
T 4e1o_A 372 ---------SFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNS-----------LTENVLKEI 431 (481)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHH-----------HHHHHHHHH
T ss_pred ---------HhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchH-----------HHHHHHHHH
Confidence 011234678888999999999999999999998755555555655541110 123434444
Q ss_pred HhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEE
Q psy13922 402 LERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRT 481 (509)
Q Consensus 402 l~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rl 481 (509)
.++..+++.|+.. .+ ..++|+
T Consensus 432 ~~~g~~~~~~~~~---------------------------------------------------~g--------~~~lR~ 452 (481)
T 4e1o_A 432 AKAGRLFLIPATI---------------------------------------------------QD--------KLIIRF 452 (481)
T ss_dssp HHHCSSBCEEEEE---------------------------------------------------TT--------EEEEEE
T ss_pred HhCCeEEEEeeEE---------------------------------------------------CC--------EEEEEE
Confidence 4443344443221 12 238999
Q ss_pred Eee---cChHHHHHHHHHHHHHHHHHHh
Q psy13922 482 TIL---PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 482 s~~---~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
++. .++++|++++++|+++.+++.+
T Consensus 453 ~~~~~~tt~~di~~~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 453 TVTSQFTTRDDILRDWNLIRDAATLILS 480 (481)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 977 3789999999999999987654
No 208
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.88 E-value=3.3e-21 Score=202.70 Aligned_cols=249 Identities=12% Similarity=0.087 Sum_probs=168.6
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHH-HHHHHHHHhhc--CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGASD-GIKSVLKLLIE--DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGY 131 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~-al~~~~~~l~~--~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v 131 (509)
..++.+++.+++.+.+|.+ ++ +++|+|+++ ++..++..+.. +++ .|+++.+.|..+...++..|++++.+
T Consensus 131 ~~~~~~~~~~~la~~~g~~--~~-~~~t~g~te~a~~~al~~~~~~~~~~----~vi~~~~~h~s~~~~~~~~G~~~~~v 203 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLN--VH-AIATPISTGMSISLCLSAARKKYGSN----VVIYPYASHKSPIKAVSFVGMNMRLV 203 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCC--CE-EEEESSCHHHHHHHHHHHHHHHHCCC----EEEEECCCCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCC--CC-EEEeCcHHHHHHHHHHHHHHHhcCCC----EEEEECCCcHHHHHHHHHcCCCceEE
Confidence 4566677777777776743 34 999999994 55545555543 454 79999999999999999999999999
Q ss_pred ecCC-CCCCCCCHHHHHHHH-HhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCC
Q psy13922 132 YLDE-SKQWGLPISELERSI-TEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGS 209 (509)
Q Consensus 132 ~~~~-~~~~~~d~~~L~~~i-~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~ 209 (509)
+..+ +.++.+|++.|++++ +.. ...++.+|++++||||||.+.+ +++|+++|+++|+++++|++|..+..+
T Consensus 204 ~~~~~~~~~~~d~~~l~~~i~~~~-~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g--- 276 (456)
T 2z67_A 204 ETVLDGDRVYVPVEDIENAIKKEI-ELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNY--- 276 (456)
T ss_dssp CCEEETTEEECCHHHHHHHHHHHH-HTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHH---
T ss_pred EEeccCCCCCcCHHHHHHHHHHHh-hCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHH---
Confidence 8742 235689999999999 421 0116778888999999999966 899999999999999999999876542
Q ss_pred ccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcc-hhhhhccccccCC
Q psy13922 210 KFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSISAMLCPT-VLALVSLPQLFDD 288 (509)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 288 (509)
..+. ....... ..+++ +.|++|.+ + ++.++||+++ .++++++.+.....++...+ ..
T Consensus 277 -~~~~--~~~~~~~---~~D~~-~~s~hK~~-~-~p~g~G~l~~--~~~~~~~~l~~~~~g~~~~~~~~----------- 334 (456)
T 2z67_A 277 -YLEK--LKKAFKY---RVDAV-VSSSDKNL-L-TPIGGGLVYS--TDAEFIKEISLSYPGRASATPVV----------- 334 (456)
T ss_dssp -HHHH--HHHHHTS---CCSEE-EEEHHHHH-C-CCSSCEEEEE--SCHHHHHHHHTTSCSCBCSHHHH-----------
T ss_pred -hhHH--HHHhhCC---CCCEE-EEcCCCCc-C-CCCCeEEEEE--cCHHHHhhcCcCCCCCCCCCHHH-----------
Confidence 1111 1111110 12354 55899976 3 5688999984 57888887743222111111 11
Q ss_pred CCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeecc
Q psy13922 289 PRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIE---GMSCNP 365 (509)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~~~~~ 365 (509)
. ..+++..+ ..++++++.+...++++++.+.|++++ |+.+.+
T Consensus 335 -------~---------------~~aal~~l-------------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~ 379 (456)
T 2z67_A 335 -------N---------------TLVSLLSM-------------GSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLD 379 (456)
T ss_dssp -------H---------------HHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCC
T ss_pred -------H---------------HHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecC
Confidence 0 11122111 123367888899999999999999886 777777
Q ss_pred CCceeEEeecC
Q psy13922 366 VQGAMYAFPQM 376 (509)
Q Consensus 366 ~~~g~~~~~~~ 376 (509)
++ +++ ++++
T Consensus 380 ~~-~~v-~~~~ 388 (456)
T 2z67_A 380 VE-SPI-ASCI 388 (456)
T ss_dssp CC-CSS-EEEE
T ss_pred CC-CeE-EEEE
Confidence 66 443 4444
No 209
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.88 E-value=3.6e-21 Score=199.82 Aligned_cols=176 Identities=12% Similarity=0.120 Sum_probs=136.7
Q ss_pred cccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----
Q psy13922 46 VGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---- 121 (509)
Q Consensus 46 ~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---- 121 (509)
+++|+ ..-..++++.+|++++ .+++++++|+++|++.++.+++++|| +|+++.|.|.+....+
T Consensus 76 y~r~~-~p~~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~Gd----~Vi~~~~~y~~~~~~~~~~l 142 (415)
T 2fq6_A 76 YGRRG-TLTHFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQGD----HVLMTNTAYEPSQDFCSKIL 142 (415)
T ss_dssp CTTTC-CHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTC----EEEEETTSCHHHHHHHHHTG
T ss_pred ccCCC-CchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCC----EEEEeCCCchHHHHHHHHHH
Confidence 34343 3334779999999883 24677788899999999999999998 9999999999877654
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH--CCcEEEEccc
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR--EKLFLFADEV 199 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~--~~i~lI~Dea 199 (509)
+..|+++..++.+ |++.|++++++ ++++|++++|+||+|.+++ +++|+++|++ +|+++|+|++
T Consensus 143 ~~~G~~v~~v~~~-------d~~~le~ai~~-----~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a 207 (415)
T 2fq6_A 143 SKLGVTTSWFDPL-------IGADIVKHLQP-----NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNT 207 (415)
T ss_dssp GGGTCEEEEECTT-------CGGGGGGGCCT-----TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECT
T ss_pred HHcCcEEEEECCC-------CHHHHHHhhcc-----CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECC
Confidence 4579999988643 78999988876 7999999999999999987 8999999999 9999999999
Q ss_pred CCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe-eEEEeeecCCHHHHHHHHHhhh
Q psy13922 200 YQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR-GGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 200 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr-~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
|...... .++ +.+ ..++++|+||.+ |.+|.+ +||++ .++++++.+.....
T Consensus 208 ~a~~~~~-----~p~-----~~g------~Div~~S~sK~l-g~~g~~~~G~l~---~~~~~~~~l~~~~~ 258 (415)
T 2fq6_A 208 WAAGVLF-----KAL-----DFG------IDVSIQAATKYL-VGHSDAMIGTAV---CNARCWEQLRENAY 258 (415)
T ss_dssp TTTTTSS-----CGG-----GGT------CSEEEEETTTTT-TCSSSCCCEEEE---ECTTTHHHHHHHHH
T ss_pred CcccccC-----Ccc-----ccC------CeEEEEeCcccc-CCCCCceEEEEE---eCHHHHHHHHHHHH
Confidence 9864321 121 111 146677999999 567754 68887 56677777776543
No 210
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.88 E-value=1.2e-20 Score=199.55 Aligned_cols=358 Identities=11% Similarity=0.029 Sum_probs=219.6
Q ss_pred HHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCC-------CcEEEeCCHHHHHHHHHHHhhcC--
Q psy13922 29 DVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADW-------QDVILSAGASDGIKSVLKLLIED-- 99 (509)
Q Consensus 29 ~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~-------~~i~~t~G~~~al~~~~~~l~~~-- 99 (509)
.+.+.+...+.. . ...|....+..++++.+++++.+.+|.+... ...++|+|+|+++..++.+.+..
T Consensus 89 ~~~~~l~~~~n~---~-~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~ 164 (475)
T 3k40_A 89 IVADMLSGAIAC---I-GFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKL 164 (475)
T ss_dssp HHHHHHHHHHCC---C-SSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCc---c-ccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHH
Confidence 344444444433 3 3348888888999999999999998865321 36899999999998888776421
Q ss_pred ------CC-------CCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEe
Q psy13922 100 ------VD-------GKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVII 165 (509)
Q Consensus 100 ------gd-------~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~ 165 (509)
+. .++..|+++.++|.++...+...|++++.+|.+++ + +|++.|+++|++..+. ..+.+|+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~--~-~d~~~L~~~i~~~~~~~~~~~~v~~~ 241 (475)
T 3k40_A 165 KEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSENH--R-MRGAALEKAIEQDVAEGLIPFYAVVT 241 (475)
T ss_dssp HHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCBTT--B-CCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECCCC--C-cCHHHHHHHHHHHHHCCCccEEEEEE
Confidence 10 01227999999999999999999999999998753 5 9999999999874322 226677889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC
Q psy13922 166 NPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG 245 (509)
Q Consensus 166 ~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G 245 (509)
.++|++|.+-+ +++|+++|++||+++++|++|+....-.. .+... ...+. ..+.+++ +.+|.+ + ..
T Consensus 242 ~~~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~-~~~~~---~~gi~----~~Ds~~~-~~hK~l-~-~p 307 (475)
T 3k40_A 242 LGTTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICP-EYRHL---MKGIE----SADSFNF-NPHKWM-L-VN 307 (475)
T ss_dssp BSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSG-GGGGG---GTTGG----GCSEEEE-CHHHHS-S-CC
T ss_pred ecCCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCH-hhHHH---hcCcc----cCCEEEE-Cchhcc-C-CC
Confidence 99999999855 99999999999999999999987543211 11111 11110 1236655 889988 3 33
Q ss_pred CeeEEEeeecCCHHHH-HHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCC
Q psy13922 246 LRGGYSEVINLDPGVK-AMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQ 324 (509)
Q Consensus 246 lr~G~v~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 324 (509)
..+|++++ .++... +.+.. ...+......+. . ..+.+ ..+..+++. ....+..++.
T Consensus 308 ~g~g~l~~--~~~~~l~~~~~~-~~~yl~~~~~~~--~------~~~~~-------~~~~~sr~~--~~l~l~~al~--- 364 (475)
T 3k40_A 308 FDCSAMWL--KDPSWVVNAFNV-DPLYLKHDMQGS--A------PDYRH-------WQIPLGRRF--RALKLWFVLR--- 364 (475)
T ss_dssp SSCEEEEE--SSGGGC-------------------------------------------CCCGGG--THHHHHHHHH---
T ss_pred CceEEEEE--eCHHHHHHHhcC-CccccCCCcCCC--C------CCccc-------ccccCCCcc--cHHHHHHHHH---
Confidence 45677764 666543 33221 111110000000 0 00000 001111100 0011111111
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhh
Q psy13922 325 PGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLER 404 (509)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~ 404 (509)
....+.++++.+...++++++.+.|+++|++++..+....++++++.-... ....+..++.++
T Consensus 365 ------~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~-----------~~~~l~~~L~~~ 427 (475)
T 3k40_A 365 ------LYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNE-----------RNEALLKRINGR 427 (475)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHH-----------HHHHHHHHHHHH
T ss_pred ------HHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchH-----------HHHHHHHHHHhC
Confidence 001233678888999999999999999999998755444444544531110 123444555555
Q ss_pred cCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee
Q psy13922 405 TGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL 484 (509)
Q Consensus 405 ~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~ 484 (509)
.++.+.|+.. . |..++|++++
T Consensus 428 g~~~~~~~~~---------------------------------------------------~--------g~~~lR~~~~ 448 (475)
T 3k40_A 428 GHIHLVPAKI---------------------------------------------------K--------DVYFLRMAIC 448 (475)
T ss_dssp TSCBCEEEEE---------------------------------------------------T--------TEEEEEEECC
T ss_pred CcEEEEeeEE---------------------------------------------------C--------CEEEEEEEeC
Confidence 4444443221 1 2239999987
Q ss_pred ---cChHHHHHHHHHHHHHHHHHHh
Q psy13922 485 ---PQPEKLKAMLEKFREFHEEFLA 506 (509)
Q Consensus 485 ---~~~~~i~~~~~~l~~~~~~~~~ 506 (509)
+++++|+.++++|+++.+++.+
T Consensus 449 ~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 449 SRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 4889999999999999987754
No 211
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.87 E-value=1.3e-20 Score=194.79 Aligned_cols=178 Identities=13% Similarity=0.093 Sum_probs=133.9
Q ss_pred CcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH---
Q psy13922 45 SVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL--- 121 (509)
Q Consensus 45 ~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~--- 121 (509)
.+++|+ .....++++.+++++ | .+++++++++++|+.. +..++++|| +|+++.|+|.+....+
T Consensus 60 ~y~r~~-~p~~~~l~~~la~l~----g----~~~~~~~~sG~~Ai~~-~~~l~~~gd----~Vi~~~~~y~~~~~~~~~~ 125 (400)
T 3nmy_A 60 EYSRTH-NPTRFAYERCVAALE----G----GTRAFAFASGMAATST-VMELLDAGS----HVVAMDDLYGGTFRLFERV 125 (400)
T ss_dssp CBTTTC-CHHHHHHHHHHHHHH----T----CSEEEEESSHHHHHHH-HHTTSCTTC----EEEEESSCCHHHHHHHHHT
T ss_pred ccccCC-CHHHHHHHHHHHHHh----C----CCCEEEecCHHHHHHH-HHHHcCCCC----EEEEeCCCchHHHHHHHHh
Confidence 334443 233467888888776 3 2367777777999988 566788888 9999999999766554
Q ss_pred --HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 122 --AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 122 --~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
+..|.+++.++.+ |++.+++++++ ++++|++++|+||+|.+++ +++|+++|+++|+++|+|++
T Consensus 126 ~~~~~g~~~~~v~~~-------d~~~l~~~i~~-----~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~ 190 (400)
T 3nmy_A 126 RRRTAGLDFSFVDLT-------DPAAFKAAIRA-----DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNT 190 (400)
T ss_dssp HHHHHCCEEEEECTT-------SHHHHHHHCCT-----TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECT
T ss_pred hHhhcCeEEEEECCC-------CHHHHHHHhcc-----CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECC
Confidence 3459999998754 78999999876 7999999999999999987 99999999999999999999
Q ss_pred CCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE-EeeecCCHHHHHHHHHhhh
Q psy13922 200 YQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY-SEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 200 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~-v~~~~~~~~~~~~l~~~~~ 269 (509)
|....+.. ++ +.+ ..++++|+||.+ |-+|.++|+ ++ +..++++.+.+.....
T Consensus 191 ~~~~~~~~-----~~-----~~g------~div~~S~sK~l-~g~g~~~gG~~v-v~~~~~~~~~l~~~~~ 243 (400)
T 3nmy_A 191 FASPMLQR-----PL-----SLG------ADLVVHSATKYL-NGHSDMVGGIAV-VGDNAELAEQMAFLQN 243 (400)
T ss_dssp TTHHHHCC-----GG-----GGT------CSEEEEETTTTT-TCSSSCCCEEEE-ECSCHHHHHHHHHHHH
T ss_pred CcccccCC-----hh-----hcC------CcEEEecCcccc-CCCCCcceeEEE-EeCCHHHHHHHHHHHH
Confidence 97543221 11 011 146688999999 457777766 32 3378899988877655
No 212
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.87 E-value=1.6e-20 Score=192.94 Aligned_cols=154 Identities=16% Similarity=0.259 Sum_probs=129.3
Q ss_pred CCCCCCCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh----
Q psy13922 21 FDDPRFPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL---- 96 (509)
Q Consensus 21 ~~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l---- 96 (509)
++.|.+|+.+++++.+.+.+ . .|.+..+..+++++++++++ .+++++++++++++..++.++
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~---~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sGt~a~~~al~~~~~~~ 73 (390)
T 3b8x_A 8 LASSTWDDLEYKAIQSVLDS---K---MFTMGEYVKQYETQFAKTFG--------SKYAVMVSSGSTANLLMIAALFFTK 73 (390)
T ss_dssp SCCCCCCHHHHHHHHHHHHH---T---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTSSS
T ss_pred CCCCCCCHHHHHHHHHHHHc---C---CCCCChHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHHhhh
Confidence 46788999999999999876 2 25567788999999999983 126777888889999999998
Q ss_pred ---hcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC
Q psy13922 97 ---IEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ 173 (509)
Q Consensus 97 ---~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~ 173 (509)
.++|+ .|+++.|+|.++...++..|++++.++.+++ ++.+|++.|++.+++ ++++|++++ ++|.
T Consensus 74 ~~~~~~g~----~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~-----~~~~v~~~~---~~g~ 140 (390)
T 3b8x_A 74 KPRLKKGD----EIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTD-----STKAILTVN---LLGN 140 (390)
T ss_dssp SCSCCTTC----EEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCT-----TEEEEEEEC---GGGC
T ss_pred hcCCCCcC----EEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCc-----CCeEEEEEC---CccC
Confidence 56676 9999999999999999999999999998765 478999999999876 789999874 3444
Q ss_pred CCCHHHHHHHHHHHHHCCcEEEEcccCCccc
Q psy13922 174 VLTKENIQDIIKFAHREKLFLFADEVYQDNV 204 (509)
Q Consensus 174 ~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~ 204 (509)
. .++++|.++|+++|+++|+|++|+...
T Consensus 141 ~---~~~~~i~~l~~~~~~~li~D~a~~~g~ 168 (390)
T 3b8x_A 141 P---NNFDEINKIIGGRDIILLEDNCESMGA 168 (390)
T ss_dssp C---CCHHHHHHHHTTSCCEEEEECTTCTTC
T ss_pred h---hhHHHHHHHHHHcCCEEEEECcCcccC
Confidence 4 459999999999999999999998543
No 213
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.86 E-value=4.1e-20 Score=195.03 Aligned_cols=302 Identities=13% Similarity=0.049 Sum_probs=177.6
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcccCCC------CcchHHHHHHHHHHHhhhcCCCCCCC---cEEEeCCHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGSYTD------SPGIEIIRRHVAQYISRRDGQPADWQ---DVILSAGASDGIKSV 92 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~Y~~------~~g~~~lr~~va~~l~~~~g~~~~~~---~i~~t~G~~~al~~~ 92 (509)
++...|+.|++++...+.+.- ...|+. ..-..++++...+.+.+.+|. +.+ ..++++++++|+..+
T Consensus 62 s~n~~~~~V~eA~~~~l~~~y---~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~--~~~~~~~~v~~~sGt~An~~a 136 (490)
T 2a7v_A 62 SENFCSRAALEALGSCLNNKY---SEGYPGKRYYGGAEVVDEIELLCQRRALEAFDL--DPAQWGVNVQPYSGSPANLAV 136 (490)
T ss_dssp TCCCCCHHHHHHHTSGGGTCC---CCC------------CTHHHHHHHHHHHHHTTC--CTTTEEEECCCSSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHcCCC---ccCCCcccccCccHHHHHHHHHHHHHHHHHcCC--CcccCceEEeCCchHHHHHHH
Confidence 444468999999988776521 111222 111235664444555444453 333 235566788999999
Q ss_pred HHHhhcCCCCCCCeEEEcCCCChhHHH--------HHHhcCCE--EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEE
Q psy13922 93 LKLLIEDVDGKKPGVLIPIPQYPLYSA--------SLAEFNME--QIGYYLDESKQWGLPISELERSITEARKHCNPRAI 162 (509)
Q Consensus 93 ~~~l~~~gd~~~~~Vlv~~p~y~~~~~--------~~~~~g~~--~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~i 162 (509)
+.+++++|| +|+++.+.|.++.. .+...|.. ++.++++++ ++.+|++.|++.+... ++++|
T Consensus 137 l~al~~pGD----~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~-~~~iD~d~le~~l~~~----~~klI 207 (490)
T 2a7v_A 137 YTALLQPHD----RIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLF----RPRLI 207 (490)
T ss_dssp HHHHCCSCE----ECCC-------------------------------CCBCTT-TCSBCHHHHHHHHHHH----CCSEE
T ss_pred HHHHcCCCC----EecccCccccccccchhhhcchhHHHcCCeEEEEecccccc-cCCcCHHHHHHHHhhc----CCcEE
Confidence 999999999 99999998865421 22344543 444444433 4689999999999764 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCC-cccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 163 VIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQ-DNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 163 vi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
+++.++||+ .. ++++|.++|+++|+++++|+++. ++...+. ...++ . ..++ ++.|+||++
T Consensus 208 i~~~s~~~~--~~---dl~~i~~ia~~~g~~livD~Ah~~glv~~g~-~~~~~-~----------~aDi-v~~S~hK~l- 268 (490)
T 2a7v_A 208 IAGTSAYAR--LI---DYARMREVCDEVKAHLLADMAHISGLVAAKV-IPSPF-K----------HADI-VTTTTHKTL- 268 (490)
T ss_dssp EECCSSCCS--CC---CHHHHHHHHHHTTCEEEEECGGGHHHHHTTS-SCCGG-G----------TCSE-EEEESSGGG-
T ss_pred EEcCCCCCC--cc---cHHHHHHHHHHcCCEEEEccccccccccCCc-CCCCC-C----------CCCE-EEECCcccC-
Confidence 988899985 33 38999999999999999999975 3333221 11121 1 1224 456999988
Q ss_pred CCCCCeeEEEeeecCCH--------------HHHHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhc
Q psy13922 242 GECGLRGGYSEVINLDP--------------GVKAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDG 305 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~--------------~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (509)
.|.++|++++ .+. ++.+.+++..... ++++..
T Consensus 269 --~Gp~GG~i~~--~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~---------------------------- 316 (490)
T 2a7v_A 269 --RGARSGLIFY--RKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNH---------------------------- 316 (490)
T ss_dssp --CSCSCEEEEE--ECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHH----------------------------
T ss_pred --ccccchheee--ccchhcccccccchhhHHHHHHHHHHhcccCCCCchHH----------------------------
Confidence 3667899973 332 3556666543321 233333
Q ss_pred ccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEEeecCCCCHHHHH
Q psy13922 306 CRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYAFPQMKLPAKAIA 384 (509)
Q Consensus 306 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~ 384 (509)
..+++..++. .-...+.++..+.+.++++++.+.|.+. |+++.. .....++|+++.-
T Consensus 317 ------~iaAla~Al~---------~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~------ 374 (490)
T 2a7v_A 317 ------AIAAVAVALK---------QACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRP------ 374 (490)
T ss_dssp ------HHHHHHHHHH---------HHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTT------
T ss_pred ------HHHHHHHHHH---------HHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCC------
Confidence 2223222211 1111224667788889999999999998 888864 3456778877751
Q ss_pred HHhhcCCCCcHHHHHHHHhhcCeEEecCCCCC
Q psy13922 385 KAKAEGKCPSVLYAFELLERTGICIVPGAGFG 416 (509)
Q Consensus 385 ~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~ 416 (509)
.|+. ... +...|++.||.+..+..++
T Consensus 375 ----~g~~-~~~-~~~~L~~~GI~v~~~~~p~ 400 (490)
T 2a7v_A 375 ----KGLD-GAR-AERVLELVSITANKNTCPG 400 (490)
T ss_dssp ----TTCC-HHH-HHHHHHHTTEECEEECCTT
T ss_pred ----CCCC-HHH-HHHHHHhCCeEEecCccCC
Confidence 1222 233 5778889999998765444
No 214
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.86 E-value=1.1e-21 Score=205.91 Aligned_cols=166 Identities=15% Similarity=0.043 Sum_probs=121.5
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEE
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQ 128 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~ 128 (509)
|.+.....++++.+++ + |. + +++++|+|+++++..++++++++|| .|+++.|+|.++...+...|+++
T Consensus 53 ~~~~~~~~~~~~~la~-~----g~--~-~~v~~~~G~t~a~~~~~~a~~~~gd----~Vlv~~~~h~s~~~~~~~~G~~~ 120 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-H----SD--Y-DGYFLVNGTTSGILSVIQSFSQKKG----DILMARNVHKSVLHALDISQQEG 120 (446)
T ss_dssp TSCSSHHHHHHHHHCS-C----TT--E-EEEEESSHHHHHHHHHHHTTTTSSS----CEEECTTCCHHHHHHHHHHTCCE
T ss_pred cCcchHHHHHHHHHHh-c----CC--C-ceEEEeCCHHHHHHHHHHHhcCCCC----EEEEecCccHHHHHHHHHcCCeE
Confidence 3445555677777777 6 42 2 6899999999999999999999988 99999999999999999999999
Q ss_pred EEEec--CCCCC--CCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCc-c
Q psy13922 129 IGYYL--DESKQ--WGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQD-N 203 (509)
Q Consensus 129 ~~v~~--~~~~~--~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~-~ 203 (509)
+.++. +++.+ +.+|++.| +.. ++++|++++ .|++|.+++ +++|+++|+++|+++|+||+|+. +
T Consensus 121 ~~v~~~~~~~~~~~~~~d~~~l---~~~-----~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~ 188 (446)
T 2x3l_A 121 HFIETHQSPLTNHYNKVNLSRL---NND-----GHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHF 188 (446)
T ss_dssp EECEEEECTTTSSEEEEEC---------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTT
T ss_pred EEEeCeeccccCcCCCCCHHHH---cCC-----CceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhh
Confidence 99987 43211 45777777 333 689999988 556999988 88999999999999999999986 3
Q ss_pred cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEe
Q psy13922 204 VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~ 252 (509)
.+.+. ..+.... + . -+++.|+||.+.| +.++||++
T Consensus 189 ~f~~~--~~~~~~~----g-----~-Di~~~S~~K~l~~--~~g~g~l~ 223 (446)
T 2x3l_A 189 GLQGF--PDSTLNY----Q-----A-DYVVQSFHKTLPA--LTMGSVLY 223 (446)
T ss_dssp TSTTS--CCCGGGG----T-----C-SEEEECHHHHSSS--CTTCEEEE
T ss_pred ccCCC--CCChHHc----C-----C-CEEEECCcccccc--ccccEEEE
Confidence 34332 2222211 1 1 2557799996633 34579997
No 215
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.85 E-value=7.9e-20 Score=190.21 Aligned_cols=157 Identities=15% Similarity=0.124 Sum_probs=124.4
Q ss_pred chHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----HhcCCEEE
Q psy13922 54 GIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL----AEFNMEQI 129 (509)
Q Consensus 54 g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~~~g~~~~ 129 (509)
...++++.++++++. +..++++++++|+..+++++.++|| +|+++.++|.++...+ +..|++++
T Consensus 59 ~~~~l~~~la~~~g~--------~~~v~~~sGt~A~~~~l~~~~~~gd----~vi~~~~~~~~~~~~~~~~~~~~g~~~~ 126 (421)
T 2ctz_A 59 TVDVLEKRLAALEGG--------KAALATASGHAAQFLALTTLAQAGD----NIVSTPNLYGGTFNQFKVTLKRLGIEVR 126 (421)
T ss_dssp HHHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHHHHHCCTTC----EEEECSCCCHHHHHHHHTHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhCC--------CceEEecCHHHHHHHHHHHHhCCCC----EEEEeCCCchHHHHHHHHHHHHcCCEEE
Confidence 347899999998831 1334455559999999999988888 9999999999987765 67899999
Q ss_pred EE-ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCC
Q psy13922 130 GY-YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEG 208 (509)
Q Consensus 130 ~v-~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~ 208 (509)
.+ +.+ |++.+++.+++ ++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|..+.+.+
T Consensus 127 ~~~~~~-------d~~~l~~~i~~-----~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g~~~- 190 (421)
T 2ctz_A 127 FTSREE-------RPEEFLALTDE-----KTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGGYLL- 190 (421)
T ss_dssp ECCTTC-------CHHHHHHHCCT-----TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGGTSC-
T ss_pred EECCCC-------CHHHHHHhhcc-----CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccccccC-
Confidence 88 543 78999999876 7999999999999999998 8999999999999999999993222221
Q ss_pred CccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEee
Q psy13922 209 SKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEV 253 (509)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~ 253 (509)
.++ ..+. .++++|+||.+ |.+|.|+|++++
T Consensus 191 ---~~~-----~~~~------Di~~~s~~K~l-~~~g~~~G~~~~ 220 (421)
T 2ctz_A 191 ---RPL-----AWGA------ALVTHSLTKWV-GGHGAVIAGAIV 220 (421)
T ss_dssp ---CGG-----GGTC------SEEEEETTTTT-TCSSCCCCEEEE
T ss_pred ---Ccc-----ccCC------eEEEECCcccc-cCCCCcEEEEEE
Confidence 111 1111 35677999999 678999999874
No 216
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.84 E-value=4.2e-19 Score=184.37 Aligned_cols=231 Identities=15% Similarity=0.122 Sum_probs=168.2
Q ss_pred CCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE---eCCHHHHHHHHHHHhhcCCCCCCCeEEEcC-CCChhHHHH----
Q psy13922 49 YTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL---SAGASDGIKSVLKLLIEDVDGKKPGVLIPI-PQYPLYSAS---- 120 (509)
Q Consensus 49 Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~---t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~-p~y~~~~~~---- 120 (509)
|+. .|..++++.+|++++ .+..++ ++|+++|+..++.+++++|| +|+++. |.|.++...
T Consensus 70 y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~pGD----~Vl~~~~~~y~~~~~~~g~~ 136 (427)
T 3i16_A 70 YGD-IGRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNLRPGN----TMLSVCGEPYDTLHDVIGIT 136 (427)
T ss_dssp TTC-HHHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHCCTTC----EEEESSSSCCGGGHHHHTCS
T ss_pred CCH-HHHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHhCCCC----EEEEeCCCccHHHHHHHhcc
Confidence 443 366788899998883 233355 78889999999999999998 999998 999988744
Q ss_pred -------HHhcCCEEEEEecCCCCCCCCCHHHHHHHHH--hhhccCCceEEEEeC----CCCCCCCCCCHHHHHHHHHHH
Q psy13922 121 -------LAEFNMEQIGYYLDESKQWGLPISELERSIT--EARKHCNPRAIVIIN----PGNPTGQVLTKENIQDIIKFA 187 (509)
Q Consensus 121 -------~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~--~~~~~~~~~~ivi~~----p~NPtG~~~s~~~l~~l~~ia 187 (509)
++..|++++.++.+++ +.+|++.++++++ . ++++|++++ |+||||.+ .++++|+++|
T Consensus 137 ~~~~~~~l~~~G~~~~~v~~~~~--g~~D~e~l~~~l~~~~-----~tklV~i~~s~~~p~nptg~i---~dl~~i~~la 206 (427)
T 3i16_A 137 ENSNMGSLKEFGINYKQVDLKED--GKPNLEEIEKVLKEDE-----SITLVHIQRSTGYGWRRALLI---EDIKSIVDCV 206 (427)
T ss_dssp CCCSSCCTGGGTCEEEECCCCTT--SSCCHHHHHHHHHTCT-----TEEEEEEECSCCSSSSCCCCH---HHHHHHHHHH
T ss_pred ccchHHHHHHcCCEEEEecCccC--CCcCHHHHHHHhhCCC-----CCEEEEEEcCCCCCCCCcccH---HHHHHHHHHH
Confidence 4567999999998755 3789999999998 5 799999988 99999877 6799999999
Q ss_pred HH--CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-CeeEEEeeecCCHHHHHHH
Q psy13922 188 HR--EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG-LRGGYSEVINLDPGVKAML 264 (509)
Q Consensus 188 ~~--~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G-lr~G~v~~~~~~~~~~~~l 264 (509)
++ +|+++|+|++|..+.+... +. +.+ ..++++|+||.+ |.+| .++||++ +++++++++
T Consensus 207 ~~~~~g~~livD~a~~~~~~~~~----p~-----~~g------aDiv~~S~sK~l-gg~g~~~gG~i~---~~~~li~~l 267 (427)
T 3i16_A 207 KNIRKDIICFVDNCYGEFMDTKE----PT-----DVG------ADLIAGSLIKNI-GGGIAPTGGYLA---GTKDCIEKT 267 (427)
T ss_dssp HHHCTTSEEEEECTTTTTSSSSC----GG-----GGT------CSEEEEETTSGG-GTTTCCSCEEEE---ECHHHHHHH
T ss_pred HHhCCCCEEEEECCCccccccCC----cc-----ccC------CeEEEecCcccC-CCCCCceEEEEE---ECHHHHHHH
Confidence 99 9999999999998764321 11 111 146688999999 5455 5789988 799999999
Q ss_pred HHhhhc-ccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHH
Q psy13922 265 HKSISA-MLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDS 343 (509)
Q Consensus 265 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (509)
+..... ..+.... + ...+...+ .+..+.....++.
T Consensus 268 ~~~~~~~~~g~~~~-----~----------------------------~~~~a~~~-----------l~gl~~~~~r~~~ 303 (427)
T 3i16_A 268 SYRLTVPGIGGECG-----S----------------------------TFGVVRSM-----------YQGLFLAPHISME 303 (427)
T ss_dssp HHHHSCTTTGGGCC-----C----------------------------CTTCHHHH-----------HHHHHHHHHHHHH
T ss_pred HHhcccCccCccCC-----c----------------------------cHHHHHHH-----------HHHHHHHHHHHHH
Confidence 875431 1111100 0 01101111 1122235667788
Q ss_pred HHHHHHHHHHHHhcCCCCeeccC
Q psy13922 344 LKQRAKMVADTFNSIEGMSCNPV 366 (509)
Q Consensus 344 ~~~~~~~l~~~L~~~~g~~~~~~ 366 (509)
..+++..+.+.|++. ++++++.
T Consensus 304 ~~~~a~~la~~L~~~-g~~V~p~ 325 (427)
T 3i16_A 304 ALKGAILCSRIMELA-GFEVMPK 325 (427)
T ss_dssp HHHHHHHHHHHHHHT-TCEEESC
T ss_pred HHHHHHHHHHHHHhC-CCeecCC
Confidence 888899999999998 6677654
No 217
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.84 E-value=9.4e-20 Score=190.53 Aligned_cols=317 Identities=16% Similarity=0.119 Sum_probs=185.2
Q ss_pred CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHH-hhcCCCCCCCeEEEcCCCChhHHHHH----HhcCC
Q psy13922 52 SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKL-LIEDVDGKKPGVLIPIPQYPLYSASL----AEFNM 126 (509)
Q Consensus 52 ~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~-l~~~gd~~~~~Vlv~~p~y~~~~~~~----~~~g~ 126 (509)
..|..++.+++.+.+.+.+| .+++++++++|++.+.+.+..+ ..++|| +|+++.++|..+...+ +..|+
T Consensus 103 ~~g~~~~~~~~~~~la~~~g--~~~~~i~~~~g~taa~ea~~~a~~~~~gd----~Viv~~~~h~s~~~~~~~~a~~~G~ 176 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAG--LEIANASMYDGATALAEGVLLALRETGRM----GVLVSQGVHPEYRAVLRAYLEAVGA 176 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHT--SSEECSCBSSHHHHHHHHHHHHHHHHTCC----EEEEETTSCHHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHHHHHHHhC--CCccceEEeCcHHHHHHHHHHHHhcCCCC----EEEEcCccCHhHHHHHHHHHHHCCC
Confidence 45666666666666665556 3567889999999443333333 245677 9999999999988665 44799
Q ss_pred EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc-CCcccc
Q psy13922 127 EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV-YQDNVY 205 (509)
Q Consensus 127 ~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea-y~~~~~ 205 (509)
+++.++.+ ++.+|++. +++ ++++|++++| ||||.+.+ +++|+++|+++|+++|+|.. .+ +
T Consensus 177 ~v~~v~~~---~~~~d~~~----i~~-----~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a---~ 237 (438)
T 1wyu_A 177 KLLTLPLE---GGRTPLPE----VGE-----EVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLS---L 237 (438)
T ss_dssp EEEEECCB---TTBCCCCC----CCT-----TEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTG---G
T ss_pred EEEEEcCc---CCccCHHH----hCC-----CeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhh---c
Confidence 99999872 24677766 444 7999999999 99999986 99999999999999996632 21 1
Q ss_pred cCCCccccHHHHHHHhCCCCCCceeEEEEecccccC---CCCCCeeEEEeeecCCHHHHHHHHHhhhcccCcchhhhhcc
Q psy13922 206 AEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM---GECGLRGGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSL 282 (509)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~---G~~Glr~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 282 (509)
+ . ...... .+ .+++++ | +|.|+ |+.|.++||++ .++++++.+.....+. .....+....
T Consensus 238 g-~--~~~~~~----~g-----~D~~~~-s-~kk~~~~~~~~Gp~~G~l~---~~~~~~~~l~~~~~g~-~~~~~~~~~~ 299 (438)
T 1wyu_A 238 G-V--LKPPGA----YG-----ADIAVG-D-GQSLGLPMGFGGPHFGFLA---TKKAFVRQLPGRLVSE-TVDVEGRRGF 299 (438)
T ss_dssp G-T--BCCHHH----HT-----CSEEEE-E-CTTTTCCCGGGCSCCEEEE---ECGGGGGGCCSCCEEE-EEBTTSCEEE
T ss_pred c-C--cCCCcc----CC-----CCEEEE-C-CcccCCCccCCCCCeeEEE---EcHHHHHhCCCceecc-ccccCCCcce
Confidence 1 1 111111 11 125544 6 67651 24466899998 5676665542111000 0000000000
Q ss_pred ccccCCCCCchhHHHHHHHhhhcccCcc---cccchhhcc--cCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy13922 283 PQLFDDPRFPDDVKQRAQAVLDGCRGQS---VGQTVMDCV--VNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNS 357 (509)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~al~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 357 (509)
.+ .++.. -+.. ....+..+. ....++.++ +. ....+.++++.+.+.++++++.+.|++
T Consensus 300 --~~---~l~~~-~~~~--r~~~~t~~~~~~~~~~a~~aa~~l~---------~~~~~g~~~~~~~~~~~~~~l~~~L~~ 362 (438)
T 1wyu_A 300 --IL---TLQAR-EQYI--RRAKAKSNITTNAQLTALMGAMYLA---------ALGPEGLREVALKSVEMAHKLHALLLE 362 (438)
T ss_dssp --EE---CCGGG-SHHH--HGGGSSCCCCSCCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred --ee---ecccc-cccc--chhcccCCccchHHHHHHHHHHHHH---------HhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00 00000 0000 000111111 011111111 11 001123677888899999999999999
Q ss_pred CCCCeeccCCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhhcCeEE--ecCCCCCCCCCccccccchhhhhhhH
Q psy13922 358 IEGMSCNPVQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLERTGICI--VPGAGFGQVPGTYHFRQQVWWRHYTQ 435 (509)
Q Consensus 358 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v--~pg~~f~~~~~~~~~r~~~~~~~~~~ 435 (509)
+||+++..+. .++.++.++.+ .+..++..++ .++||.+ .++..|..
T Consensus 363 ~~g~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~L-~~~gi~v~~~~~~~~~~------------------ 410 (438)
T 1wyu_A 363 VPGVRPFTPK-PFFNEFALALP------------KDPEAVRRAL-AERGFHGATPVPREYGE------------------ 410 (438)
T ss_dssp STTCEECSCS-SBCSEEEEECS------------SCHHHHHHHH-HHTTCCCCEECCTTSCS------------------
T ss_pred CCCeEECCCC-CeEEEEEEeCC------------CCHHHHHHHH-HHCCceeccccccccCC------------------
Confidence 9899887654 34333333321 1234444444 4569998 66654432
Q ss_pred HHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee--cChHHHHHHHHHHHHHH
Q psy13922 436 RAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL--PQPEKLKAMLEKFREFH 501 (509)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~--~~~~~i~~~~~~l~~~~ 501 (509)
+ ++|+|+. ++++++++++++|++++
T Consensus 411 -------------------------------~----------~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 411 -------------------------------N----------LALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp -------------------------------S----------EEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred -------------------------------C----------eEEEEecccCCHHHHHHHHHHHHHHh
Confidence 2 8999999 79999999999998764
No 218
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.84 E-value=8.8e-19 Score=187.05 Aligned_cols=196 Identities=15% Similarity=0.093 Sum_probs=145.2
Q ss_pred cCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc--------CCCC--CCCeEEEcCCCChhH
Q psy13922 48 SYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE--------DVDG--KKPGVLIPIPQYPLY 117 (509)
Q Consensus 48 ~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--------~gd~--~~~~Vlv~~p~y~~~ 117 (509)
.|....+..++.+.+.+++.+.+|.+ .+++++|+|+++++..++.+++. +|+. .+..|+++.+.|.++
T Consensus 139 ~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~ 216 (515)
T 2jis_A 139 TYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSI 216 (515)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred chhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHH
Confidence 37767777788888888887777754 78999999999999988888742 3420 012788899999999
Q ss_pred HHHHHhcCC---EEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcE
Q psy13922 118 SASLAEFNM---EQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLF 193 (509)
Q Consensus 118 ~~~~~~~g~---~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~ 193 (509)
...++..|. +++.+|.++ ++.+|++.|++.+++.... .++++|++++|+||||.+.+ +++|+++|+++|++
T Consensus 217 ~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g~~ 291 (515)
T 2jis_A 217 QKGAAFLGLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHGLW 291 (515)
T ss_dssp HHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCE
T ss_pred HHHHHHcCCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcCCe
Confidence 999998888 899999864 4689999999999863221 24889999999999999976 89999999999999
Q ss_pred EEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCH-HHHHH
Q psy13922 194 LFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDP-GVKAM 263 (509)
Q Consensus 194 lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~-~~~~~ 263 (509)
+++|++|+.+..... .+.. ....+. ..+++ +.|++|.+ | .+.++|++++ .++ +++..
T Consensus 292 l~vD~a~~~~~~~~~-~~~~---~~~g~~----~aD~v-~~s~hK~l-~-~p~g~G~l~~--~~~~~~~~~ 349 (515)
T 2jis_A 292 LHVDAAWGGSVLLSQ-THRH---LLDGIQ----RADSV-AWNPHKLL-A-AGLQCSALLL--QDTSNLLKR 349 (515)
T ss_dssp EEEEETTGGGGGGCT-TTGG---GGTTGG----GCSEE-EECTTSTT-C-CCSCCEEEEE--SCCSCHHHH
T ss_pred EEEehhhhhHHHhCh-hhHh---hcCCCc----cCCEE-EECccccc-C-CCCCeeEEEE--eChHHHHHH
Confidence 999999998776422 1111 111110 12255 45999998 5 3457898875 555 46554
No 219
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.74 E-value=1.1e-22 Score=213.57 Aligned_cols=199 Identities=12% Similarity=-0.014 Sum_probs=137.2
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|++++.+++.+ .....|+ .....+|.+.+++++ + ..+.+++++++++|+..+++.+..-. .++.
T Consensus 118 ~p~V~~Av~~q~~~---~~~~~~~-~~~~~~Lae~L~~~~----p---~~~~v~~~nSGseA~~~Aik~ar~~t--gr~~ 184 (465)
T 2yky_A 118 HPVIRAAVERALAV---GLNLSTQ-TENEALFAEAVCDRF----P---SIDLVRFTNSGTEANLMALATATAIT--GRKT 184 (465)
Confidence 68899999888877 2233343 233355666666655 2 35789999999999999998864311 1338
Q ss_pred EEEcCCCChhHHHHHH----hcCC--EEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC-CCCHHH
Q psy13922 107 VLIPIPQYPLYSASLA----EFNM--EQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ-VLTKEN 179 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~----~~g~--~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~-~~s~~~ 179 (509)
|++..++|+++...+. ..|+ .++.++. .|++.|++.+++.. .++++|+++..+|++|. ..++++
T Consensus 185 ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~--~~~aavi~epv~~~~G~~~~~~~~ 255 (465)
T 2yky_A 185 VLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHG--HDCAAILVEPMLGAGGCVPAERAF 255 (465)
Confidence 9999999998765443 1233 2222221 27889999887421 16888888655666996 556899
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
+++|.++|++||+++|+||+|. |..+ ........ .+. .-+.||||.+ | .|+|+||++ ++++
T Consensus 256 l~~l~~l~~~~g~llI~DEv~~-~r~g---~~~a~~~~--gv~--------pDi~t~sK~l-g-~G~piG~v~---~~~~ 316 (465)
T 2yky_A 256 LDLLRAEASRCGALLIFDEVMT-SRLS---GGGAQEML--GIS--------ADLTTLGKYI-G-GGMSFGAFG---GRRD 316 (465)
Confidence 9999999999999999999999 7332 11111111 111 1134889999 6 599999998 7899
Q ss_pred HHHHHHH
Q psy13922 260 VKAMLHK 266 (509)
Q Consensus 260 ~~~~l~~ 266 (509)
+++.+..
T Consensus 317 i~~~l~~ 323 (465)
T 2yky_A 317 LMERFDP 323 (465)
Confidence 9998876
No 220
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.84 E-value=2.2e-19 Score=185.65 Aligned_cols=199 Identities=18% Similarity=0.205 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHhc---ccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE---eCCHHHHHHHHHHHhhcCCC
Q psy13922 28 DDVKQRAQAVLDG---CRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL---SAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 28 ~~v~~a~~~~l~~---~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~---t~G~~~al~~~~~~l~~~gd 101 (509)
.+|++++.+.... ........|+. .|...|++.+|++++ .+..++ ++|+++|+..++.+++++||
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~~GD 102 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGILRPDD 102 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence 4566666655422 11222233554 356789999998883 344555 88999999999999999998
Q ss_pred CCCCeEEEcC-CCChhHHHH----------HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeC----
Q psy13922 102 GKKPGVLIPI-PQYPLYSAS----------LAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIIN---- 166 (509)
Q Consensus 102 ~~~~~Vlv~~-p~y~~~~~~----------~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~---- 166 (509)
+|+++. |.|..+... ++..|+++..++.+++ +.+|++.+++++++ ++++|++++
T Consensus 103 ----~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~--g~~d~e~l~~ai~~-----~tklV~i~~s~g~ 171 (409)
T 3jzl_A 103 ----ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLEN--GDVDFPRIAKKMTP-----KTKMIGIQRSRGY 171 (409)
T ss_dssp ----EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTT--SCCCHHHHHHHCCT-----TEEEEEEECSCTT
T ss_pred ----EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCC--CCcCHHHHHHhccC-----CCeEEEEECCCCC
Confidence 999998 999998754 4667999999998754 57899999999976 799999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHH--CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC
Q psy13922 167 PGNPTGQVLTKENIQDIIKFAHR--EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC 244 (509)
Q Consensus 167 p~NPtG~~~s~~~l~~l~~ia~~--~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~ 244 (509)
|+||||.+ .++++|+++|++ +|+++|+|++|..+.+... ... .+ ..++++|+||.+ |.+
T Consensus 172 p~nptg~v---~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~--p~~-------~g------~Div~~S~sK~l-gg~ 232 (409)
T 3jzl_A 172 ADRPSFTI---EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQE--PPE-------VG------ADIIAGSLIKNP-GGG 232 (409)
T ss_dssp SSSCCCCH---HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCC--SGG-------GT------CSEEEEETTSGG-GTT
T ss_pred CCCCcCcc---ccHHHHHHHHHhhCCCCEEEEeCCcccccccCC--ccc-------cC------CeEEEECccccC-Ccc
Confidence 99999987 569999999999 9999999999998764321 111 11 146678999999 545
Q ss_pred C-CeeEEEeeecCCHHHHHHHHHhh
Q psy13922 245 G-LRGGYSEVINLDPGVKAMLHKSI 268 (509)
Q Consensus 245 G-lr~G~v~~~~~~~~~~~~l~~~~ 268 (509)
| .+.||++ +++++++++....
T Consensus 233 ~~~~GG~v~---~~~~li~~l~~~~ 254 (409)
T 3jzl_A 233 LAKTGGYIA---GKEALVDLCGYRL 254 (409)
T ss_dssp TCSSCEEEE---ECHHHHHHHHHHH
T ss_pred CCceEEEEE---eCHHHHHHHHHHh
Confidence 5 4578887 7899999998754
No 221
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.83 E-value=8.3e-19 Score=182.11 Aligned_cols=199 Identities=18% Similarity=0.145 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHhcc---cCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEE---eCCHHHHHHHHHHHhhcCCC
Q psy13922 28 DDVKQRAQAVLDGC---RGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVIL---SAGASDGIKSVLKLLIEDVD 101 (509)
Q Consensus 28 ~~v~~a~~~~l~~~---~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~---t~G~~~al~~~~~~l~~~gd 101 (509)
+.|++++.+..... .......|+.. |...+++.++++++ .+..++ ++|+++|+..++.+++++||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~g--------~e~alv~p~~~sGt~A~~~al~all~pGD 117 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIFN--------TESAFVRPHFVNGTHAIGAALFGNLRPND 117 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHhC--------CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence 45566655543321 11122225443 67889999998883 344456 78889999999999999999
Q ss_pred CCCCeEEEcC-CCChhHHH-----------HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh-hhccCCceEEEEeC--
Q psy13922 102 GKKPGVLIPI-PQYPLYSA-----------SLAEFNMEQIGYYLDESKQWGLPISELERSITE-ARKHCNPRAIVIIN-- 166 (509)
Q Consensus 102 ~~~~~Vlv~~-p~y~~~~~-----------~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~-~~~~~~~~~ivi~~-- 166 (509)
+|+++. |.|.++.. .++..|++++.++. + ++.+|++.+++++++ . ++++|++++
T Consensus 118 ----~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~--~~~~d~e~l~~~i~~~~----~tklV~i~~s~ 186 (427)
T 3hvy_A 118 ----TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-K--DGKVDINTVKEELKKDD----SIKLIHIQRST 186 (427)
T ss_dssp ----EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-B--TTBCCHHHHHHHHHHCT----TEEEEEEESSC
T ss_pred ----EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC-C--CCCcCHHHHHHHhhCCC----CCEEEEEECCC
Confidence 999998 99998773 34567999999988 3 358899999999983 2 799999988
Q ss_pred --CCCCCCCCCCHHHHHHHHHHHHH--CCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCC
Q psy13922 167 --PGNPTGQVLTKENIQDIIKFAHR--EKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMG 242 (509)
Q Consensus 167 --p~NPtG~~~s~~~l~~l~~ia~~--~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G 242 (509)
|+||||.+ .++++|+++|++ +|+++|+|++|..+.+... +. +.+ ..++++|+||.+ |
T Consensus 187 gyp~nptg~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~----p~-----~~g------aDiv~~S~sK~l-g 247 (427)
T 3hvy_A 187 GYGWRKSLRI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKE----PT-----DVG------ADIIAGSLIKNI-G 247 (427)
T ss_dssp CSSSSCCCCH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSC----GG-----GGT------CSEEEEETTSGG-G
T ss_pred CCCCCccccH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCC----Cc-----ccC------CeEEEECCcccc-c
Confidence 99999877 679999999999 8999999999988764321 11 111 146688999999 4
Q ss_pred CCC-CeeEEEeeecCCHHHHHHHHHhh
Q psy13922 243 ECG-LRGGYSEVINLDPGVKAMLHKSI 268 (509)
Q Consensus 243 ~~G-lr~G~v~~~~~~~~~~~~l~~~~ 268 (509)
..| .++||++ ++++++++++...
T Consensus 248 g~g~~~GG~i~---~~~~li~~l~~~~ 271 (427)
T 3hvy_A 248 GGIATTGGYIA---GKEEYVTQATFRV 271 (427)
T ss_dssp TTTCCSCEEEE---ECHHHHHHHHHHH
T ss_pred ccccceEEEEE---ECHHHHHHHHHHh
Confidence 344 5678887 7899999998754
No 222
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.83 E-value=1.5e-19 Score=188.41 Aligned_cols=181 Identities=18% Similarity=0.175 Sum_probs=138.9
Q ss_pred HHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC-CCChhHHHHH----------HhcCCE
Q psy13922 59 RRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI-PQYPLYSASL----------AEFNME 127 (509)
Q Consensus 59 r~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~-p~y~~~~~~~----------~~~g~~ 127 (509)
++++++.+.+.+|.+....+++++ ++++|+..++.+++++|| .|+++. |.|..+...+ +..|++
T Consensus 67 ~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd----~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~ 141 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGD----ELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIG 141 (431)
T ss_dssp HHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTC----EEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCE
T ss_pred HHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCC----EEEEeCCCCchhHHHHHhhcccccchHHHcCCE
Confidence 444444444444533222233355 668999999999999998 999998 9999988655 457999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEe-CCCCCCCCCCCHHHHHHHHHHHHH--CCcEEEEcccCCccc
Q psy13922 128 QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHR--EKLFLFADEVYQDNV 204 (509)
Q Consensus 128 ~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~-~p~NPtG~~~s~~~l~~l~~ia~~--~~i~lI~Deay~~~~ 204 (509)
++.++.+++ +.+|++.|++++++ ++++|+++ +||||+|...+.+++++|+++|++ +|+++|+|++|..+.
T Consensus 142 ~~~v~~~~~--~~~d~e~l~~~l~~-----~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~ 214 (431)
T 3ht4_A 142 YNAVPLTEG--GLVDFEAVAAAIHS-----NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFI 214 (431)
T ss_dssp EEECCBCTT--SSBCHHHHHHHCCT-----TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTS
T ss_pred EEEeCCCCC--CCcCHHHHHhhcCC-----CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhc
Confidence 999998764 58899999999986 79999998 699999999999999999999999 999999999999987
Q ss_pred ccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHHhhh
Q psy13922 205 YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHKSIS 269 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~~~~ 269 (509)
+... ... .+. .++++|+||.+.|..+...||++ .++++++.+.....
T Consensus 215 ~~~~--~~~-------~g~------Di~~~S~sK~lgg~~~~~GG~v~---~~~~li~~l~~~~~ 261 (431)
T 3ht4_A 215 EEQE--PCH-------VGA------DLMAGSLIKNPGGGIVKTGGYIV---GKEQYVEACAYRLT 261 (431)
T ss_dssp SSCC--GGG-------TTC------SEEEEETTSGGGTTTCSSCEEEE---ECHHHHHHHHHHHS
T ss_pred cCCC--ccc-------cCC------eEEEcCccccCCCCCCCceEEEE---ecHHHHHHHHHHhc
Confidence 5421 111 111 36678999997321224559998 78999999877544
No 223
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.83 E-value=3.2e-19 Score=196.33 Aligned_cols=179 Identities=15% Similarity=0.117 Sum_probs=127.2
Q ss_pred CCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH-HHhcCCEEE
Q psy13922 51 DSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS-LAEFNMEQI 129 (509)
Q Consensus 51 ~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~-~~~~g~~~~ 129 (509)
+..-..++++.+|++++ . ...+++++|+++++..++.+++++|| .|+++.|+|.++... +...|++++
T Consensus 171 ~~~~i~e~e~~lA~~~g------a-e~~i~v~nGtt~an~~ai~al~~pGD----~VLv~~~~H~S~~~~~~~l~Ga~~v 239 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYN------A-DKTYFVLGGSSNANNTVTSALVSNGD----LVLFDRNNHKSVYNSALAMAGGRPV 239 (730)
T ss_dssp TBTHHHHHHHHHHHHTT------C-SEEEEESSHHHHHHHHHHHHHCCTTC----EEEEETTCCHHHHHHHTTTTCCEEE
T ss_pred ChHHHHHHHHHHHHHHC------C-CcEEEECCHHHHHHHHHHHHhcCCCC----EEEEcCCchHHHHHHHHHHCCCEEE
Confidence 33445789999998883 2 24588899999999999999999998 999999999998888 888899999
Q ss_pred EEecCCCCCCC----CCHHHH-----HHHHHhh-hc---cCCc-eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEE
Q psy13922 130 GYYLDESKQWG----LPISEL-----ERSITEA-RK---HCNP-RAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195 (509)
Q Consensus 130 ~v~~~~~~~~~----~d~~~L-----~~~i~~~-~~---~~~~-~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI 195 (509)
.++.+.+ .|+ +|++.| ++++++. .+ ..++ +++++++| ||+|.+.+ +++|+++|+++|+++|
T Consensus 240 ~v~~~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~li 314 (730)
T 1c4k_A 240 YLQTNRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIE 314 (730)
T ss_dssp EECEEEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEE
T ss_pred EEeCCcc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEE
Confidence 8876532 334 688888 7777652 00 0012 89999998 58999976 8999999999999999
Q ss_pred EcccCCcc-cccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee-EEE
Q psy13922 196 ADEVYQDN-VYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG-GYS 251 (509)
Q Consensus 196 ~Deay~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~-G~v 251 (509)
+|++|... .+.+..+..+.... ...+.+ +.+++++.|+||.+ +|++. |++
T Consensus 315 vDeAh~~~~~f~~~~~g~~~l~~-~~~g~D--~~~~iv~~S~hK~L---~g~~~gg~I 366 (730)
T 1c4k_A 315 FDSAWVGYEQFIPMMRNSSPLLI-DDLGPE--DPGIIVVQSVHKQQ---AGFSQTSQI 366 (730)
T ss_dssp EECTTCCGGGSSGGGGGGCTTSC-CCCCTT--SCEEEEEECHHHHS---SCCTTCEEE
T ss_pred EEcccccccccCcccCCcCcccc-cccCCC--CCCEEEEECCCCCC---CCCCCEEEE
Confidence 99999753 23211000000000 001111 33578899999987 45554 455
No 224
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.82 E-value=1.2e-19 Score=191.51 Aligned_cols=178 Identities=10% Similarity=-0.027 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-------
Q psy13922 26 FPDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE------- 98 (509)
Q Consensus 26 ~p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~------- 98 (509)
-+|.|++++.+++..........|+. ....++++++++.+.+..+ ...++|++++|+++|+..+++.++.
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~ 156 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACGSCSNENAFKTIFMWYRSKER 156 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCchhHHHHHHHHHHHHhhhhcc
Confidence 37899999988765311001112432 2346799999997766543 3567999999999999999998841
Q ss_pred ------------------CCCCCCCeEEEcCCCChhHHHHHHhc-CCE-------------EEEEecCCCC---C--C--
Q psy13922 99 ------------------DVDGKKPGVLIPIPQYPLYSASLAEF-NME-------------QIGYYLDESK---Q--W-- 139 (509)
Q Consensus 99 ------------------~gd~~~~~Vlv~~p~y~~~~~~~~~~-g~~-------------~~~v~~~~~~---~--~-- 139 (509)
+|. +++.|++.++.|+++...+... |.. .+.+|..... . +
T Consensus 157 ~~~~~t~~~~~~~~~~~~~g~-~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 235 (472)
T 1ohv_A 157 GQSAFSKEELETCMINQAPGC-PDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQ 235 (472)
T ss_dssp TTCCCCHHHHHHHHTTCTTTS-CCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHH
T ss_pred CcccccccccccccccccccC-CCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccch
Confidence 230 1359999999999876555322 221 1122211000 0 0
Q ss_pred ---CCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccC
Q psy13922 140 ---GLPISELERSITEARKH-CNPRAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAE 207 (509)
Q Consensus 140 ---~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~ 207 (509)
..|++.|++.+++.... .++++|+++..+|++|. ..+++++++|.++|++||+++|+||+|.+|.+.+
T Consensus 236 ~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g 308 (472)
T 1ohv_A 236 QEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTG 308 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS
T ss_pred hHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCC
Confidence 12578888888763221 25788888777888996 6789999999999999999999999999876653
No 225
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.80 E-value=5.7e-18 Score=187.82 Aligned_cols=177 Identities=15% Similarity=0.140 Sum_probs=129.7
Q ss_pred cchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEe
Q psy13922 53 PGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYY 132 (509)
Q Consensus 53 ~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 132 (509)
.-..++++.+++++ | . .+.+++++|+++++..++.+++++|| .|+++.|+|.++...+...|++++.++
T Consensus 205 g~v~~~ee~la~l~----G--~-d~~i~~~~Gtt~a~~~~i~al~~~GD----~Vlv~~~~h~s~~~~~~~~G~~~v~v~ 273 (755)
T 2vyc_A 205 GAFGESEKYAARVF----G--A-DRSWSVVVGTSGSNRTIMQACMTDND----VVVVDRNCHKSIEQGLMLTGAKPVYMV 273 (755)
T ss_dssp HHHHHHHHHHHHHH----T--C-SEEEEESSHHHHHHHHHHHHHCCTTC----EEEEESSCCHHHHHHHHHHCCEEEEEC
T ss_pred cHHHHHHHHHHHHh----C--C-CceEEECCcHHHHHHHHHHHhcCCCC----EEEECCCchHHHHHHHHHcCCEEEEEe
Confidence 34567788888877 3 1 24688899999999999999999998 999999999999999999999999998
Q ss_pred cCCCCCCC----C-----CHHHHHHHHHhhh-----ccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 133 LDESKQWG----L-----PISELERSITEAR-----KHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 133 ~~~~~~~~----~-----d~~~L~~~i~~~~-----~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.+.+ +|+ + |++.|++++++.. ...+++++++++| ||+|.+.+ +++|+++|+++|+++|+|+
T Consensus 274 ~~~~-~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDe 348 (755)
T 2vyc_A 274 PSRN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDE 348 (755)
T ss_dssp CCBC-TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEEC
T ss_pred CCCC-ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEEC
Confidence 7643 333 4 9999999997621 1123458999998 79999977 8999999999999999999
Q ss_pred cCCccc-ccCCC-ccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe-eEEEe
Q psy13922 199 VYQDNV-YAEGS-KFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR-GGYSE 252 (509)
Q Consensus 199 ay~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr-~G~v~ 252 (509)
+|.... +.+.. ...++ .. + ..+....++|++.|+||.+ +|.+ .|+++
T Consensus 349 A~~~~~~~~~~~~~~~~~--~g-~-~aD~~~~~~iv~~S~hK~L---~g~~~g~~i~ 398 (755)
T 2vyc_A 349 AWYGYARFNPIYADHYAM--RG-E-PGDHNGPTVFATHSTHKLL---NALSQASYIH 398 (755)
T ss_dssp TTCTTGGGCGGGTTSSSS--CS-C-CCCCSSBEEEEEEETTTSS---SCCTTCEEEE
T ss_pred cCchhcccCcccCCcchh--cC-C-cCCccCCCeEEEECccccc---cCcCCeeeee
Confidence 997532 22100 01111 00 0 0111234678899999987 4555 45554
No 226
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.76 E-value=8.2e-18 Score=175.38 Aligned_cols=199 Identities=10% Similarity=0.040 Sum_probs=136.5
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++++ .... ..+..-..++.+.+++.+ . ..+.|+++++++||...+++..+.... ++.
T Consensus 105 hp~v~~Av~~q~~~---~~~~-~~~~~~~~~lae~l~~~~----p---~~~~v~f~~SGsEA~e~AiklAr~~tg--r~~ 171 (454)
T 4ao9_A 105 APEIRDAVIEAMQG---GINL-TGHNLLEGRLARLICERF----P---QIEQLRFTNSGTEANLMALTAALHFTG--RRK 171 (454)
T ss_dssp CHHHHHHHHHHHHT---CSCC-CSEESSHHHHHHHHHHHS----T---TCSEEEEESSHHHHHHHHHHHHHHHHT--CCE
T ss_pred CHHHHHHHHHHHhc---CCCc-cCCcHHHHHHHHHHHHhC----C---CCCEEEEeCchHHHHHHHHHHHHhccc--CCe
Confidence 68999999999987 2222 122223355666666655 2 357899999999999999998865432 458
Q ss_pred EEEcCCCChhHHHHHHhc------CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC-CCCHHH
Q psy13922 107 VLIPIPQYPLYSASLAEF------NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ-VLTKEN 179 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~------g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~-~~s~~~ 179 (509)
|+....+|++....+... ......+|. -|++.+++.+++... ++.+|++.......|. ..+++.
T Consensus 172 ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~--~iAavIvEPv~g~~G~~~p~~~f 242 (454)
T 4ao9_A 172 IVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGP--EIAVVLVEPMQGASGCIPGQPDF 242 (454)
T ss_dssp EEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGG--GEEEEEECSEESTTTCEECCHHH
T ss_pred EEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCC--ceEEEEeccccCCCCccCCchhh
Confidence 999999998854322111 122233221 278999999986432 5778888655666675 667899
Q ss_pred HHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHH
Q psy13922 180 IQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPG 259 (509)
Q Consensus 180 l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~ 259 (509)
|++|.++|++||+++|+||++.. ..+ ....... ..+.++ + .+++|.+ | .|+++|.++ +.++
T Consensus 243 L~~lr~lc~~~g~lLI~DEV~tG--R~G--~~~a~e~--~gv~PD-----i---~t~gK~l-g-gG~Piga~~---~~~e 303 (454)
T 4ao9_A 243 LQALRESATQVGALLVFDEVMTS--RLA--PHGLANK--LGIRSD-----L---TTLGKYI-G-GGMSFGAFG---GRAD 303 (454)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGG--GGS--TTCHHHH--HTCCCS-----E---EEEEGGG-G-TTSSCEEEE---ECHH
T ss_pred HHHHHHHHhhcCCEEEEECCCcC--CCc--cccchhc--cCCCCc-----E---EEecccc-C-CCCcceeee---eHHH
Confidence 99999999999999999999974 222 1112111 223332 3 3679999 5 899999998 7999
Q ss_pred HHHHHHH
Q psy13922 260 VKAMLHK 266 (509)
Q Consensus 260 ~~~~l~~ 266 (509)
+++.+..
T Consensus 304 i~~~~~~ 310 (454)
T 4ao9_A 304 VMALFDP 310 (454)
T ss_dssp HHGGGCT
T ss_pred HHHHHhh
Confidence 9987753
No 227
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.76 E-value=1.4e-17 Score=169.99 Aligned_cols=332 Identities=13% Similarity=0.084 Sum_probs=203.0
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCcc-----cCCC--CcchHHHHHHHHHHHhhhcCCCCCC-CcEEE-eCCHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVG-----SYTD--SPGIEIIRRHVAQYISRRDGQPADW-QDVIL-SAGASDGIKSV 92 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~-----~Y~~--~~g~~~lr~~va~~l~~~~g~~~~~-~~i~~-t~G~~~al~~~ 92 (509)
.....|+.|++++.+.+....+...+ +.++ ..-+.+.|+.+++++ + .+. ++|++ |+|+|++++++
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll----~--~~~~~evif~t~~~T~a~n~a 93 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELL----A--VPDNYKVIFLQGGGCGQFSAV 93 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHH----T--CCTTEEEEEESSHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh----C--CCCCCeEEEEcCchHHHHHHH
Confidence 35567999999999988753321111 1111 123456777777777 4 333 57888 58999999999
Q ss_pred HHHhhcC--CCCCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 93 LKLLIED--VDGKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 93 ~~~l~~~--gd~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
+..+..+ || +|++..-.+.+ +...++..|..++.++.+.. +..+++.++..+++ ++++|.+++..
T Consensus 94 ~~~l~~~~~Gd----~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~--~~~~~~~~~~~i~~-----~t~lV~~~h~e 162 (377)
T 3e77_A 94 PLNLIGLKAGR----CADYVVTGAWSAKAAEEAKKFGTINIVHPKLGS--YTKIPDPSTWNLNP-----DASYVYYCANE 162 (377)
T ss_dssp HHHHGGGSTTC----EEEECCCSHHHHHHHHHHTTTSEEEECSCCCSS--SCSCCCGGGCCCCT-----TCSCEEEESEE
T ss_pred HHhccCCCCCC----eEEEEECCHHHHHHHHHHHHhCCceEEeccCCC--cCCCCChHHhccCC-----CccEEEEeCcc
Confidence 9999875 67 88776655554 34556777887777666533 35566666555554 79999999889
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCee
Q psy13922 169 NPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRG 248 (509)
Q Consensus 169 NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~ 248 (509)
|.||+..|. +|+++|+++++|.+++.... ...+.. ..++ +.|..|.+ |.+|+
T Consensus 163 t~tG~~~pi--------i~~~~~~~~~vD~~q~~g~~-----~id~~~-----------~~~~-~~s~~K~~-gp~G~-- 214 (377)
T 3e77_A 163 TVHGVEFDF--------IPDVKGAVLVCDMSSNFLSK-----PVDVSK-----------FGVI-FAGAQKNV-GSAGV-- 214 (377)
T ss_dssp TTTTEECSS--------CCCCTTCCEEEECTTTTTSS-----CCCGGG-----------CSEE-EEEGGGTT-SCTTC--
T ss_pred CchheEchh--------hhccCCCEEEEEcccccCCC-----CCchhh-----------cCEE-EEeccccc-CCCcc--
Confidence 999999883 46789999999999986432 122221 1254 45779999 88886
Q ss_pred EEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCC
Q psy13922 249 GYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEP 328 (509)
Q Consensus 249 G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 328 (509)
|++.+ ++++.+.+... .+..+ + +..........+++...+..++..+++
T Consensus 215 g~l~~---~~~~l~~~~~~-----~p~~~---------------~-~~~~~~~~~~~~Tp~v~~i~~l~~al~------- 263 (377)
T 3e77_A 215 TVVIV---RDDLLGFALRE-----CPSVL---------------E-YKVQAGNSSLYNTPPCFSIYVMGLVLE------- 263 (377)
T ss_dssp EEEEE---ETTSCSCCCTT-----SCGGG---------------C-HHHHHTTTTCSSCCCHHHHHHHHHHHH-------
T ss_pred EEEEE---cHHHHhhccCC-----CCchh---------------h-HHHHhhcCCCCCCchHHHHHHHHHHHH-------
Confidence 44442 33332221100 00000 0 000000000011222224455555433
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc----CCceeEEeecCCCCHHHHHHHhhcCCCCc----HHHHHH
Q psy13922 329 SYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP----VQGAMYAFPQMKLPAKAIAKAKAEGKCPS----VLYAFE 400 (509)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~ 400 (509)
|-....-++.+.++.+++.+++.+.|.++||+.+.+ ..++..+.+.++ ++.++ ..++ .
T Consensus 264 -~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~------------~~~~~~~~~~~~l-~ 329 (377)
T 3e77_A 264 -WIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIG------------NAKGDDALEKRFL-D 329 (377)
T ss_dssp -HHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEES------------STTCCHHHHHHHH-H
T ss_pred -HHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcC------------CCCCchhHHHHHH-H
Confidence 111110267888899999999999999998887432 133444444444 33221 2233 3
Q ss_pred HHhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEE
Q psy13922 401 LLERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFR 480 (509)
Q Consensus 401 ll~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 480 (509)
.+.++||.+++|... .+ .+|
T Consensus 330 ~l~~~Gi~~~~g~~~--------------------------------------------------~g----------~iR 349 (377)
T 3e77_A 330 KALELNMLSLKGHRS--------------------------------------------------VG----------GIR 349 (377)
T ss_dssp HHHHTTEESCBCCTT--------------------------------------------------TC----------SEE
T ss_pred HHHHCCcEEeCCCCc--------------------------------------------------CC----------EEE
Confidence 445789998876521 12 699
Q ss_pred EEee--cChHHHHHHHHHHHHHHHH
Q psy13922 481 TTIL--PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 481 ls~~--~~~~~i~~~~~~l~~~~~~ 503 (509)
+|+. +++++++.+++.|++++++
T Consensus 350 iS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 350 ASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9998 7999999999999988765
No 228
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.74 E-value=6.6e-17 Score=164.23 Aligned_cols=329 Identities=14% Similarity=0.100 Sum_probs=200.8
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCccc----C-CC--CcchHHHHHHHHHHHhhhcCCCCCCCcEEE-eCCHHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGS----Y-TD--SPGIEIIRRHVAQYISRRDGQPADWQDVIL-SAGASDGIKSVL 93 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~----Y-~~--~~g~~~lr~~va~~l~~~~g~~~~~~~i~~-t~G~~~al~~~~ 93 (509)
|+..+|+.|++++.+.+....+...+- + ++ ..-+.+.|+.+++++ |.+ ++++|++ |+|+|+++++++
T Consensus 12 gpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll----~~~-~~~~v~f~t~~~T~a~n~~~ 86 (361)
T 3m5u_A 12 GPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY----ELN-DDYEVLFLQGGASLQFAMIP 86 (361)
T ss_dssp SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHH----TCC-TTEEEEEESSHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEEcCcHHHHHHHHH
Confidence 667789999999999887532111110 1 11 123456777777777 321 2457888 999999999999
Q ss_pred HHhhcCCCCCCCeE--EEcCCCCh-hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC
Q psy13922 94 KLLIEDVDGKKPGV--LIPIPQYP-LYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP 170 (509)
Q Consensus 94 ~~l~~~gd~~~~~V--lv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP 170 (509)
..+. ++| ++ ++.. .|. .+...++..|+++..++.+.++.+.++++. + +++ ++++|.+++..|.
T Consensus 87 ~~~~-~~~----~~~~i~~~-~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~-----~t~lv~~~~~e~~ 152 (361)
T 3m5u_A 87 MNLA-LNG----VCEYANTG-VWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSD-----NADYAYICSNNTI 152 (361)
T ss_dssp HHHC-CSS----CEEEEECS-HHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCT-----TSSEEEEESEETT
T ss_pred HhcC-CCC----eEEEEeCC-HHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cCC-----CCCEEEEeCCCCC
Confidence 9998 665 44 3332 222 345566778999999998876433245555 3 555 7999999988999
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEE
Q psy13922 171 TGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGY 250 (509)
Q Consensus 171 tG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~ 250 (509)
||+.++. +++ +|+++++|.+++.... ...+. ..++++ .|..|.+ |.+|+ |+
T Consensus 153 tG~~~~~--------i~~-~~~~~~vD~~q~~g~~-----~id~~-----------~~d~~~-~s~~K~~-gp~G~--g~ 203 (361)
T 3m5u_A 153 YGTQYQN--------YPK-TKTPLIVDASSDFFSR-----KVDFS-----------NIALFY-GGVQKNA-GISGL--SC 203 (361)
T ss_dssp TTEECSS--------CCC-CSSCEEEECGGGTTSS-----CCCCT-----------TEEEEE-EETTTTS-SCTTC--EE
T ss_pred cceeCCc--------ccc-cCCEEEEEcccccCCC-----CCCcc-----------cCCEEE-Eechhcc-CCCcc--EE
Confidence 9998762 333 4999999999876332 11211 122554 4889999 88885 55
Q ss_pred EeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCCCch
Q psy13922 251 SEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGEPSY 330 (509)
Q Consensus 251 v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 330 (509)
++ .++++.+.+.... .+..... ..........+++...+..++..+++
T Consensus 204 l~---~~~~~~~~~~~~~----~p~~~~~----------------~~~~~~~~~~~Tp~v~~i~~l~~al~--------- 251 (361)
T 3m5u_A 204 IF---IRKDMLERSKNKQ----IPSMLNY----------------LTHAENQSLFNTPPTFAIYMFNLEMD--------- 251 (361)
T ss_dssp EE---EEHHHHHHHHTCC----CCGGGCH----------------HHHHHTTTCSSCCCHHHHHHHHHHHH---------
T ss_pred EE---EcHHHHhhhcCCC----CCceeeh----------------HHHhhcCCCCCCccHHHHHHHHHHHH---------
Confidence 55 3777777665310 0111000 00000000112222224444444432
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCC-eecc-C--CceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHHHhh
Q psy13922 331 EQFSRE--KQSVLDSLKQRAKMVADTFNSIEGM-SCNP-V--QGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFELLER 404 (509)
Q Consensus 331 ~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~-~--~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ll~~ 404 (509)
...+. ++.+.++.+++.+++.+.|.+++++ .... + .+...+.+.++ . +...+..+ ...|++
T Consensus 252 -~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~--~---------~~~~~~~~-~~~L~~ 318 (361)
T 3m5u_A 252 -WLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIA--K---------NKDLEPLF-VKEAEE 318 (361)
T ss_dssp -HHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEES--S---------CTTHHHHH-HHHHHH
T ss_pred -HHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECC--C---------chhhhHHH-HHHHHH
Confidence 11112 6788889999999999999999766 4432 1 22333333343 1 00012233 466788
Q ss_pred cCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEEEee
Q psy13922 405 TGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRTTIL 484 (509)
Q Consensus 405 ~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rls~~ 484 (509)
+||.+.+|... .+ .+|+|+.
T Consensus 319 ~gI~~~~g~~~--------------------------------------------------~g----------~iRiS~~ 338 (361)
T 3m5u_A 319 AGMIGLKGHRI--------------------------------------------------LG----------GIRASIY 338 (361)
T ss_dssp TTEECCBCCTT--------------------------------------------------TC----------SEEEECC
T ss_pred CCCEEecCCCc--------------------------------------------------cC----------eEEEEcc
Confidence 89998876521 12 5999998
Q ss_pred --cChHHHHHHHHHHHHHHHH
Q psy13922 485 --PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 485 --~~~~~i~~~~~~l~~~~~~ 503 (509)
++.++|+.+++.|+++.++
T Consensus 339 ~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 339 NALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp TTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 6999999999998888764
No 229
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.73 E-value=2.9e-17 Score=168.35 Aligned_cols=329 Identities=13% Similarity=0.074 Sum_probs=196.1
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCC-----cccCCC--CcchHHHHHHHHHHHhhhcCCCCC-CCcEEE-eCCHHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQS-----VGSYTD--SPGIEIIRRHVAQYISRRDGQPAD-WQDVIL-SAGASDGIKSV 92 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~-----~~~Y~~--~~g~~~lr~~va~~l~~~~g~~~~-~~~i~~-t~G~~~al~~~ 92 (509)
++..+|+.|++++.+.+.+..+.. .++.+. ..-+.+.|+.++++++ .+ +++|++ |+|+|++++++
T Consensus 34 gpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~a 107 (386)
T 3qm2_A 34 GPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN------IPSNYKVLFCHGGGRGQFAGV 107 (386)
T ss_dssp SSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHT------CCTTEEEEEEESCTTHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCCchHHHHHH
Confidence 556689999999987775422111 111111 3456789999999994 33 247888 69999999999
Q ss_pred HHHhhcCCCCCCCeEEEcCCCChh--HHHHHHhcCCEEEEEecC--CCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCC
Q psy13922 93 LKLLIEDVDGKKPGVLIPIPQYPL--YSASLAEFNMEQIGYYLD--ESKQWGLPISELERSITEARKHCNPRAIVIINPG 168 (509)
Q Consensus 93 ~~~l~~~gd~~~~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~--~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~ 168 (509)
+..+.++|| +|++..-.+.+ +...++..| ++..++.+ +. +..++++.++..+++ ++++|.+++..
T Consensus 108 i~~l~~~gd----~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~-G~~~~~~~~~~~l~~-----~t~lV~~~h~e 176 (386)
T 3qm2_A 108 PLNLLGDKT----TADYVDAGYWAASAIKEAKKYC-APQIIDAKITVD-GKRAVKPMREWQLSD-----NAAYLHYCPNE 176 (386)
T ss_dssp HHHHCTTCC----EEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEET-TEEEECCGGGCCCCT-----TCSCEEECSEE
T ss_pred HHhccCCCC----eEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccC-CCCCCchHHHhhcCC-----CCcEEEEECCc
Confidence 999988887 77654433333 455567778 88888876 33 222567777766665 79999899888
Q ss_pred CCCCCC-CCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCCe
Q psy13922 169 NPTGQV-LTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGLR 247 (509)
Q Consensus 169 NPtG~~-~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr 247 (509)
|.||+. .+ +++|. +|+++++|.+++.... ...+.. ..+++ .|..|.+ |++|+
T Consensus 177 t~tG~~i~p---i~~i~-----~g~~~~vDa~qs~g~~-----pidv~~-----------~~~~~-~s~hK~l-GP~G~- 229 (386)
T 3qm2_A 177 TIDGIAIDE---TPDFG-----PEVVVTADFSSTILSA-----PLDVSR-----------YGVIY-AGAQKNI-GPAGL- 229 (386)
T ss_dssp TTTTEECCC---CCCCC-----TTCCEEEECTTTTTSS-----CCCGGG-----------CSEEE-EETTTTT-CCTTE-
T ss_pred CCcCEecCc---hhhhc-----CCCEEEEEcccccCCC-----CCCccc-----------cCEEE-Eeccccc-CCCcc-
Confidence 999996 66 44443 7999999999876332 222221 12544 5889999 88885
Q ss_pred eEEEeeecCCHHHHHHHHHhhhcccCcchhhhhccccccCCCCCchhHHHHHHHhhhcccCcccccchhhcccCCCCCCC
Q psy13922 248 GGYSEVINLDPGVKAMLHKSISAMLCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDGCRGQSVGQTVMDCVVNPPQPGE 327 (509)
Q Consensus 248 ~G~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 327 (509)
|++.+ ++++.+.+.... +... + | ..........++++..+..++..+++
T Consensus 230 -g~l~v---~~~~~~~~~~~~-----p~~~---------~---~----~~~~~~~~~~gTp~v~~i~~l~~Al~------ 278 (386)
T 3qm2_A 230 -TLVIV---REDLLGKAHESC-----PSIL---------D---Y----TVLNDNDSMFNTPPTFAWYLSGLVFK------ 278 (386)
T ss_dssp -EEEEE---EGGGCSCCCTTS-----CGGG---------C---H----HHHHHC-------CCSHHHHHHHHHH------
T ss_pred -EEEEE---CHHHHhhhcccC-----CcHH---------H---H----HHHhhcCCCCCCCcHHHHHHHHHHHH------
Confidence 55552 444433221100 0000 0 0 00000001112333335555655543
Q ss_pred CchHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCC-eec-c--CCceeEEeecCCCCHHHHHHHhhcCCCCcHHHHHHH
Q psy13922 328 PSYEQFSRE--KQSVLDSLKQRAKMVADTFNSIEGM-SCN-P--VQGAMYAFPQMKLPAKAIAKAKAEGKCPSVLYAFEL 401 (509)
Q Consensus 328 ~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~g~-~~~-~--~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 401 (509)
...+. ++.+.++.+++++++.+.|+++ ++ ... . ..+...+.+.++-+ ++ +..++ ..
T Consensus 279 ----~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~----------~~--~~~~~-~~ 340 (386)
T 3qm2_A 279 ----WLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLADN----------TL--DKVFL-EE 340 (386)
T ss_dssp ----HHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEESSG----------GG--HHHHH-HH
T ss_pred ----HHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEECCCc----------cc--cHHHH-HH
Confidence 12222 6788889999999999999988 54 221 1 12333444334310 11 23333 34
Q ss_pred HhhcCeEEecCCCCCCCCCccccccchhhhhhhHHHHHHHhhcCCCCchhhhhhhhhcccccccCCCCCCCCCCceeEEE
Q psy13922 402 LERTGICIVPGAGFGQVPGTYHFRQQVWWRHYTQRAIAKAKAEGKCPSVLYAFESLERTGICIVPGAGFGQVPGTYHFRT 481 (509)
Q Consensus 402 l~~~gI~v~pg~~f~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rl 481 (509)
|+++||.+++|..+. + .+|+
T Consensus 341 L~~~gI~~~~g~~~~--------------------------------------------------~----------~iRi 360 (386)
T 3qm2_A 341 SFAAGLHALKGHRVV--------------------------------------------------G----------GMRA 360 (386)
T ss_dssp HHHTTEECCBCCTTT--------------------------------------------------C----------SEEE
T ss_pred HHHCCCEEeCCCCCc--------------------------------------------------C----------eEEE
Confidence 778899988765221 1 5999
Q ss_pred Eee--cChHHHHHHHHHHHHHHHH
Q psy13922 482 TIL--PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 482 s~~--~~~~~i~~~~~~l~~~~~~ 503 (509)
|+. +++++|+.+++.|+++.++
T Consensus 361 S~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 361 SIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHHHHHh
Confidence 998 6899999999999888765
No 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.72 E-value=1.8e-16 Score=173.21 Aligned_cols=178 Identities=13% Similarity=0.087 Sum_probs=126.6
Q ss_pred CCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEE
Q psy13922 50 TDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQI 129 (509)
Q Consensus 50 ~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~ 129 (509)
.+..-..++++.+|++++ ....+++++|++.++..++.+++++|| .|+++.++|.++...+...|++++
T Consensus 192 ~~~g~i~eaE~~lA~~fG-------a~~a~~v~nGts~An~~ai~al~~pGD----~VLv~r~~H~S~~~~l~lsGa~pv 260 (715)
T 3n75_A 192 DHSGPHKEAEQYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGS----TILIDRNCHKSLTHLMMMSDVTPI 260 (715)
T ss_dssp TTBTHHHHHHHHHHHHHT-------CSEEEEESSHHHHHHHHHHHHHCCTTC----EEEEESSCCHHHHHHHHHSCCEEE
T ss_pred CCcHHHHHHHHHHHHHhC-------CCCceEECcHHHHHHHHHHHHhCCCCC----EEEECCCccHHHHHHHHHcCCEEE
Confidence 344455789999999984 224577788888999999999999999 999999999999999999999999
Q ss_pred EEecCCCCCCCC---------CHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccC
Q psy13922 130 GYYLDESKQWGL---------PISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVY 200 (509)
Q Consensus 130 ~v~~~~~~~~~~---------d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay 200 (509)
.++.+.+ .|++ |++.|++++++..+...++++++++| ||+|.+++ +++|+++|++++ +++||+|
T Consensus 261 ~v~~~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH 333 (715)
T 3n75_A 261 YFRPTRN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAW 333 (715)
T ss_dssp EECCCBC-TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTT
T ss_pred EEecccc-ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEcccc
Confidence 9987643 4554 89999999986311112348999999 99999988 777777887663 7999999
Q ss_pred Cccc-ccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCCC-eeEEEee
Q psy13922 201 QDNV-YAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECGL-RGGYSEV 253 (509)
Q Consensus 201 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Gl-r~G~v~~ 253 (509)
.... +++. .+....+. .+ ...+.-++++.|+||+++ |+ ..|++.+
T Consensus 334 ~~~~~f~~~--~~~~~al~--~g-~~aD~vii~~~S~hKtL~---gltqgs~i~v 380 (715)
T 3n75_A 334 VPYTNFSPI--YEGKCGMS--GG-RVEGKVIYETQSTHKLLA---AFSQASMIHV 380 (715)
T ss_dssp CTTGGGSGG--GTTSSTTS--SS-CCTTCEEEEEECHHHHSS---CCTTCEEEEE
T ss_pred ccccccCCc--cccccccc--cC-cCCCEEEEEEeccccccc---CCCCeeEEEe
Confidence 8653 3221 11000010 00 001222356889999983 44 3577763
No 231
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.67 E-value=1.8e-15 Score=158.15 Aligned_cols=230 Identities=12% Similarity=0.057 Sum_probs=143.6
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCe
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPG 106 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~ 106 (509)
+|.|.+++.+++.+....... +.+.....++.+.+++.. . .-..+.++++++++||++.+++..+.... +..
T Consensus 82 ~p~v~~Ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~----p-~~~~~~v~f~~sGsEA~e~AlklAr~~t~--r~~ 153 (456)
T 4atq_A 82 DPAVVAAVQEAAAHFTHTCFM-VTPYEGYVAVTEQLNRLT----P-GDHAKRTVLFNSGAEAVENAVKVARLATG--RDA 153 (456)
T ss_dssp CHHHHHHHHHHHHHCSCCTTT-TSCCHHHHHHHHHHHHHS----S-CSSCEEEEEESSHHHHHHHHHHHHHHHHC--CCE
T ss_pred CHHHHHHHHHHHhhccCcccC-ccCcHHHHHHHHHHHHhC----C-CCCCcEEEEeCChHHHHHHHHHHHhhhhc--CCe
Confidence 689999999998873211111 333343344555555443 1 01245799999999999999998765432 558
Q ss_pred EEEcCCCChhHHHHHHhc-C-------------CEEEEEecCCC----CCCCCCHHHHHHHHHh---hhccCCceEEEEe
Q psy13922 107 VLIPIPQYPLYSASLAEF-N-------------MEQIGYYLDES----KQWGLPISELERSITE---ARKHCNPRAIVII 165 (509)
Q Consensus 107 Vlv~~p~y~~~~~~~~~~-g-------------~~~~~v~~~~~----~~~~~d~~~L~~~i~~---~~~~~~~~~ivi~ 165 (509)
|+....+|++....+... + ..+..+|.... ....-+.+.+++.++. .....++.+|++.
T Consensus 154 ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivE 233 (456)
T 4atq_A 154 VVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIE 233 (456)
T ss_dssp EEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEEC
T ss_pred EEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEec
Confidence 999999999865443221 1 12444443211 0011234444444432 1111267888886
Q ss_pred CCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCC
Q psy13922 166 NPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGEC 244 (509)
Q Consensus 166 ~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~ 244 (509)
..+.-.|. ..+++.+++|.++|++||+++|.||++.+|...|. +.....+ ++.++ ++ +++|.+ | .
T Consensus 234 Piqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~--~~a~e~~--gv~PD-----iv---t~gK~l-g-g 299 (456)
T 4atq_A 234 PIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGE--WFAVDHE--GVVPD-----II---TMAKGI-A-G 299 (456)
T ss_dssp SSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGT--TCCCS-----EE---EECGGG-G-T
T ss_pred cccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccc--ccccccc--CCCCc-----hh---hhhhcc-c-C
Confidence 55666675 67789999999999999999999999999876652 3232221 22222 33 668999 5 8
Q ss_pred CCeeEEEeeecCCHHHHHHHHHhhh-cccCcchhhhhc
Q psy13922 245 GLRGGYSEVINLDPGVKAMLHKSIS-AMLCPTVLALVS 281 (509)
Q Consensus 245 Glr~G~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 281 (509)
|+++|.++ ..+++++.+..... .+++.+.+++++
T Consensus 300 g~P~~av~---~~~~i~~~~~~~~~~~Tf~gnpla~aa 334 (456)
T 4atq_A 300 GLPLSAIT---GRADLLDAVHPGGLGGTYGGNPVACAA 334 (456)
T ss_dssp TSSCEEEE---EEHHHHTTSCTTSSCCSSSSCHHHHHH
T ss_pred cCCceeeE---ecHHHHhcccccCCCCCCCCChHHHHh
Confidence 99999998 78888887754332 344555554444
No 232
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.65 E-value=1.9e-15 Score=158.63 Aligned_cols=217 Identities=15% Similarity=0.094 Sum_probs=137.0
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc----CCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE----DVDG 102 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~----~gd~ 102 (509)
+|.|.+++.+++.+....... +. ...+....+|+.|.+..+ ...+.|+++++++||++.+++..+. .|.+
T Consensus 85 ~p~v~~Ai~~q~~~l~~~~~~-~~---~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~ 158 (473)
T 4e3q_A 85 HKGLIDAAKAQYERFPGYHAF-FG---RMSDQTVMLSEKLVEVSP--FDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKP 158 (473)
T ss_dssp CHHHHHHHHHHHHHCCCCCCC-TT---EEEHHHHHHHHHHHHHSS--CSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHHHHhccccccc-cc---ccCHHHHHHHHHHHhhCC--CCccEEEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 689999999999883211111 11 112334445555544432 2346899999999999999998642 3433
Q ss_pred CCCeEEEcCCCChhHHHHHHhcCC------------EEEEEecCCC---CCCCCC--------HHHHHHHHHhhhccCCc
Q psy13922 103 KKPGVLIPIPQYPLYSASLAEFNM------------EQIGYYLDES---KQWGLP--------ISELERSITEARKHCNP 159 (509)
Q Consensus 103 ~~~~Vlv~~p~y~~~~~~~~~~g~------------~~~~v~~~~~---~~~~~d--------~~~L~~~i~~~~~~~~~ 159 (509)
++..|+...-+|++.......... ....++.... +...-. .+.+++.+..... .++
T Consensus 159 ~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~-~~i 237 (473)
T 4e3q_A 159 QKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGA-DTI 237 (473)
T ss_dssp TCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCG-GGE
T ss_pred CcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCC-Cce
Confidence 456899999999986544322211 1222221110 000111 2345555554321 256
Q ss_pred eEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEeccc
Q psy13922 160 RAIVIINPGNPTGQ-VLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSK 238 (509)
Q Consensus 160 ~~ivi~~p~NPtG~-~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 238 (509)
.+|++...+.-.|. ..+++.+++|.++|++||+++|.||++.+|..++ ....... .++.++ ++ +++|
T Consensus 238 Aavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG--~~fa~e~--~gv~PD-----i~---t~~K 305 (473)
T 4e3q_A 238 AGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTG--NTWGCVT--YDFTPD-----AI---ISSK 305 (473)
T ss_dssp EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTS--SSCHHHH--TTCCCS-----EE---EECG
T ss_pred EEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCccc--chhHHHh--cCCCCC-----hH---Hhcc
Confidence 77777666666776 5677899999999999999999999999997665 2333332 233333 33 6699
Q ss_pred ccCCCCC-CeeEEEeeecCCHHHHHHHHHh
Q psy13922 239 GYMGECG-LRGGYSEVINLDPGVKAMLHKS 267 (509)
Q Consensus 239 ~~~G~~G-lr~G~v~~~~~~~~~~~~l~~~ 267 (509)
.+ | .| +++|.++ .++++.+.+...
T Consensus 306 ~l-~-gG~~Pl~av~---~~~~i~~~~~~~ 330 (473)
T 4e3q_A 306 NL-T-AGFFPMGAVI---LGPELSKRLETA 330 (473)
T ss_dssp GG-G-TTSSCCEEEE---ECHHHHHHHHHH
T ss_pred cc-c-CCCCCccccc---ccHHHHHHhccc
Confidence 99 4 66 9999998 799999988653
No 233
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.57 E-value=9.6e-15 Score=163.20 Aligned_cols=217 Identities=12% Similarity=-0.003 Sum_probs=132.3
Q ss_pred CHHHHHHHHHHHhcccCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhh-----cCCC
Q psy13922 27 PDDVKQRAQAVLDGCRGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLI-----EDVD 101 (509)
Q Consensus 27 p~~v~~a~~~~l~~~~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-----~~gd 101 (509)
.|.+.+++.+++.+.....+..+ ..+...++++.|.+..+.+ ..+.+++++++++|++.+++... ..|.
T Consensus 399 ~p~i~~Ai~~Q~~~l~h~~~~~~-----~~~~~~~Lae~L~~~~p~~-~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~ 472 (831)
T 4a0g_A 399 QAELAREMGYTAARFGHVMFPEN-----VYEPALKCAELLLDGVGKG-WASRVYFSDNGSTAIEIALKMAFRKFCVDHNF 472 (831)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTTE-----ECHHHHHHHHHHHHTTTTT-TCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHHhhccccccccc-----CCHHHHHHHHHHHHhCCCC-CCCEEEECCChhHHHHHHHHHHHHHHHhhcCC
Confidence 47899999888887321111111 1233445555554432211 13689999999999999998873 1221
Q ss_pred C--------CCCeEEEcCCCChhHHHHH-HhcCC---------------EE-E------------EEecCCCCCC-----
Q psy13922 102 G--------KKPGVLIPIPQYPLYSASL-AEFNM---------------EQ-I------------GYYLDESKQW----- 139 (509)
Q Consensus 102 ~--------~~~~Vlv~~p~y~~~~~~~-~~~g~---------------~~-~------------~v~~~~~~~~----- 139 (509)
+ ++..||...-.|++....+ ...|. .+ . .++.......
T Consensus 473 ~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~ 552 (831)
T 4a0g_A 473 CEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEY 552 (831)
T ss_dssp ---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSST
T ss_pred CccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCcccccccccc
Confidence 1 2457888888888754333 32221 00 0 1111110000
Q ss_pred --CCC------------------HHHHHHHHHhh---hccCCceEEEEeCC-CCCCCC-CCCHHHHHHHHHHHHHCCcEE
Q psy13922 140 --GLP------------------ISELERSITEA---RKHCNPRAIVIINP-GNPTGQ-VLTKENIQDIIKFAHREKLFL 194 (509)
Q Consensus 140 --~~d------------------~~~L~~~i~~~---~~~~~~~~ivi~~p-~NPtG~-~~s~~~l~~l~~ia~~~~i~l 194 (509)
.-| .+.|++.+++. ....++.+|++... ++..|. .++++++++|.++|++||+++
T Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilL 632 (831)
T 4a0g_A 553 GTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPV 632 (831)
T ss_dssp TEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCE
T ss_pred ccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeE
Confidence 001 24566666531 01125777777654 788887 568999999999999999999
Q ss_pred EEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccCCCCC-CeeEEEeeecCCHHHHHHHHH
Q psy13922 195 FADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYMGECG-LRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 195 I~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~G-lr~G~v~~~~~~~~~~~~l~~ 266 (509)
|+||++..|...|. ....... ++.++ + .++||.+ | .| +++|+++ .++++++.+..
T Consensus 633 I~DEV~tGfGRtG~--~fa~e~~--gv~PD-----i---itlsK~L-~-gG~~Plgav~---~~~~i~~~~~~ 688 (831)
T 4a0g_A 633 IFDEVFTGFWRLGV--ETTTELL--GCKPD-----I---ACFAKLL-T-GGMVPLAVTL---ATDAVFDSFSG 688 (831)
T ss_dssp EEECTTTTTTTTSB--SSTHHHH--SSCCS-----E---EEECGGG-G-TTSSCCEEEE---ECHHHHHTTCS
T ss_pred EEEcCccccccCCC--chhhHhc--CCCCc-----E---EEEeccc-c-cCccCcEEEE---ECHHHHHHHhc
Confidence 99999999877653 2333322 22222 3 3789999 4 57 8999998 79999988754
No 234
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.53 E-value=2.5e-13 Score=140.39 Aligned_cols=188 Identities=9% Similarity=0.039 Sum_probs=126.3
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcC----CCCCCCeEEEcCCCChhHHHHHHhcCCEEEE
Q psy13922 55 IEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIED----VDGKKPGVLIPIPQYPLYSASLAEFNMEQIG 130 (509)
Q Consensus 55 ~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~----gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~ 130 (509)
...+.+.+..++.+..|.+ .....++++|+|.+...++.+.+++ ++ .|+++.-+|.+...++..+|+.++.
T Consensus 96 ~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~----~viv~r~aHkSv~kAl~l~Gl~p~~ 170 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAK----YIIWPRIDQKSCFKSMVTAGFEPVV 170 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCC----EEEEECCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCC----EEEEECCcHHHHHHHHHHcCCeeEE
Confidence 4467778888887777743 2234688888885555555555444 55 8999999999999999999999998
Q ss_pred EecCC-CCCCCCCHHHHHHHHHhhhccCCceEEEEeCC-CCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCC
Q psy13922 131 YYLDE-SKQWGLPISELERSITEARKHCNPRAIVIINP-GNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEG 208 (509)
Q Consensus 131 v~~~~-~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p-~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~ 208 (509)
++... +..+.+|++.|+++|++... ..+++++.+| ++.+|.+- ++++|+++|++||+++++|++|+.....
T Consensus 171 v~~~~~~~~~~id~~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~d---dl~~Ia~ia~~~gi~l~VD~A~G~~~~~-- 243 (450)
T 3bc8_A 171 IENVLEGDELRTDLKAVEAKIQELGP--EHILCLHSTTACFAPRVPD---RLEELAVICANYDIPHVVNNAYGLQSSK-- 243 (450)
T ss_dssp ECCEEETTEEECCHHHHHHHHHHHCG--GGEEEEEEESSCCTTBCCC---CHHHHHHHHHHHTCCEEEECTTTTTCHH--
T ss_pred EEeeecCccCCcCHHHHHHHHHhcCC--CCEEEEEEECCcCCCceec---CHHHHHHHHHHCCCeEEEECCCchhhhh--
Confidence 86531 22468999999999988521 1345554444 55456664 4999999999999999999999864321
Q ss_pred CccccHH-HHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 209 SKFYSFK-KVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 209 ~~~~~~~-~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
...+. +.. +.+ ..+.++ .|.+|++. .-...+++.+ .+++..+++..
T Consensus 244 --~~~l~~~a~-~~~----~AD~~v-~S~HK~l~--a~~~~~~l~~--rd~~~~~~~~~ 290 (450)
T 3bc8_A 244 --CMHLIQQGA-RVG----RIDAFV-QSLDKNFM--VPVGGAIIAG--FNEPFIQDISK 290 (450)
T ss_dssp --HHHHHHHHH-HHS----CCCEEE-EEHHHHHS--CCSSCEEEEE--SCHHHHHHHHH
T ss_pred --hHhHHHHHh-ccc----CCCEEE-ECCccCCC--chhccEEEEe--cCHHHHHHHHH
Confidence 11111 111 111 122554 48999983 4455666654 68887776654
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.52 E-value=8.7e-12 Score=127.53 Aligned_cols=190 Identities=9% Similarity=0.058 Sum_probs=124.5
Q ss_pred HHHHHHH-HHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCC
Q psy13922 57 IIRRHVA-QYISRRDGQPADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDE 135 (509)
Q Consensus 57 ~lr~~va-~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 135 (509)
.|-+.++ +|+. ..|.+ .....++++|+|.++..++.+.++++.+.++.||++-.+|.+...++..+|++++.++...
T Consensus 116 ~ltn~l~ld~L~-~~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~ 193 (501)
T 3hl2_A 116 KITNSLVLDIIK-LAGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVL 193 (501)
T ss_dssp HHHHHHHHHHHH-HTTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEE
T ss_pred HHHHHHHHHHHH-HcCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeee
Confidence 4555555 4444 44755 2346899999997777777777664210113999999999999999999999999997621
Q ss_pred -CCCCCCCHHHHHHHHHhhhccCCceEEE-EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCcccc
Q psy13922 136 -SKQWGLPISELERSITEARKHCNPRAIV-IINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYS 213 (509)
Q Consensus 136 -~~~~~~d~~~L~~~i~~~~~~~~~~~iv-i~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~ 213 (509)
+..+.+|++.++++|++... ...+++ .+.+.|-.+.+ +++++|+++|++||+++++|++|+..... +..
T Consensus 194 d~~~~~id~e~le~aI~e~ga--~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~----~~~ 264 (501)
T 3hl2_A 194 EGDELRTDLKAVEAKVQELGP--DCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSK----CMH 264 (501)
T ss_dssp ETTEEEECHHHHHHHHHHHCG--GGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHH----HHH
T ss_pred cccccCCCHHHHHHHHHhcCC--CcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhh----hhh
Confidence 12468899999999998521 233444 44555643444 35999999999999999999999764311 111
Q ss_pred HHHHHHHhCCCCCCceeEEEEecccccCCCCCCeeEEEeeecCCHHHHHHHHH
Q psy13922 214 FKKVLVEMGEPYKSMELASFMSCSKGYMGECGLRGGYSEVINLDPGVKAMLHK 266 (509)
Q Consensus 214 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~G~~Glr~G~v~~~~~~~~~~~~l~~ 266 (509)
+..-.-+.++ .+.+ +.|..|++. .-+..|.+.+ .++++++++..
T Consensus 265 lp~sA~~~Gr----AD~v-VqS~HK~ll--vpIGG~ii~~--~d~e~l~~~~~ 308 (501)
T 3hl2_A 265 LIQQGARVGR----IDAF-VQSLDKNFM--VPVGGAIIAG--FNDSFIQEISK 308 (501)
T ss_dssp HHHHHHHHSC----CCEE-EEEHHHHHC--CCSSCEEEEE--SCHHHHHHHHH
T ss_pred hHHHHHhcCC----CcEE-Eecccccce--eecCceEEEe--CCHHHHHHHHH
Confidence 1111112221 2255 458999974 4344555533 78888887744
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.28 E-value=8.8e-10 Score=112.34 Aligned_cols=296 Identities=13% Similarity=0.053 Sum_probs=169.1
Q ss_pred CCCCCCHHHHHHHHHHHhcccCCCccc------CCCCcchHHHHHHHHHHHhhhcCCCCCCC----cEEEeCCHHHHHHH
Q psy13922 22 DDPRFPDDVKQRAQAVLDGCRGQSVGS------YTDSPGIEIIRRHVAQYISRRDGQPADWQ----DVILSAGASDGIKS 91 (509)
Q Consensus 22 ~~~~~p~~v~~a~~~~l~~~~~~~~~~------Y~~~~g~~~lr~~va~~l~~~~g~~~~~~----~i~~t~G~~~al~~ 91 (509)
..+..++.|++++-..+.. ..... |+......++.+...+...+.+| .+.. ||-.-+|+ .|...
T Consensus 62 SEN~~S~aV~~a~gS~ltn---KYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~--a~~A~w~VNVQP~SGs-~AN~a 135 (490)
T 3ou5_A 62 SENFCSRAALEALGSCLNN---KYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQPYSGS-PANLA 135 (490)
T ss_dssp TCCCCCHHHHHHHTSGGGT---CCCCC----------CHHHHHHHHHHHHHHHHTT--CCTTTEEEECCCSSHH-HHHHH
T ss_pred CCCcCCHHHHHHhcCcccc---cccCCCCCccccCCChHHHHHHHHHHHHHHHHhC--CCccccCCCCCcCCHH-HHHHH
Confidence 3444466666666555544 11111 23222333444444455555555 3333 45555555 68889
Q ss_pred HHHHhhcCCCCCCCeEEEcCCCChhHHHHH--------Hhc--CCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceE
Q psy13922 92 VLKLLIEDVDGKKPGVLIPIPQYPLYSASL--------AEF--NMEQIGYYLDESKQWGLPISELERSITEARKHCNPRA 161 (509)
Q Consensus 92 ~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~--------~~~--g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ 161 (509)
++.+|++||| +|+..+..+.++...- ... -.+.++++++++ +..+|.+++++...+. +|++
T Consensus 136 vy~All~PGD----~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~----kPkl 206 (490)
T 3ou5_A 136 VYTALLQPHD----RIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLF----RPRL 206 (490)
T ss_dssp HHHHHCC-CC----CEECBC----------------------------CBCEETT-TTEECHHHHHHHHHHH----CCSE
T ss_pred HHHHHcCCCC----EEEecccCCCCcccccccCCCcccccccccccccccccCCC-CCcccHHHHHHHHhhc----CCCe
Confidence 9999999999 9999887766653211 111 235566666654 3479999999999987 9999
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCceeEEEEecccccC
Q psy13922 162 IVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMELASFMSCSKGYM 241 (509)
Q Consensus 162 ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 241 (509)
|++..-.+| ..++ ++++.+||++.|.++++|-+|.-...-++ .+++... ..+++ ..|.+|++
T Consensus 207 Ii~G~SaY~--r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g-~~psP~~----------~ADvV-TtTTHKTL- 268 (490)
T 3ou5_A 207 IIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAK-VIPSPFK----------HADIV-TTTTHKTL- 268 (490)
T ss_dssp EEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTT-SSCCGGG----------TCSEE-EEESSSTT-
T ss_pred EEECCccCc--cccC---HHHHHHHHhhcccEEEechhhhhhhhccc-ccCCccc----------cceEE-eccccccc-
Confidence 998655555 2334 88888899999999999999854333223 2222221 22366 45889998
Q ss_pred CCCCCeeEEEeeecCCH--------------HHHHHHHHhhhcc--cCcchhhhhccccccCCCCCchhHHHHHHHhhhc
Q psy13922 242 GECGLRGGYSEVINLDP--------------GVKAMLHKSISAM--LCPTVLALVSLPQLFDDPRFPDDVKQRAQAVLDG 305 (509)
Q Consensus 242 G~~Glr~G~v~~~~~~~--------------~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (509)
.|=|.|.+.+ .+. ++.+++.+...+. +++-..
T Consensus 269 --rGPrGG~Il~--~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h---------------------------- 316 (490)
T 3ou5_A 269 --RGARSGLIFY--RKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNH---------------------------- 316 (490)
T ss_dssp --CSCSCEEEEE--ECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHH----------------------------
T ss_pred --cCCCceEEEe--ccccccccccccchhHHHHHHHHHhhcCccccccchHH----------------------------
Confidence 5668899874 321 4566665544322 222222
Q ss_pred ccCcccccchhhcccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeecc-CCceeEEeecCCCCHHHHH
Q psy13922 306 CRGQSVGQTVMDCVVNPPQPGEPSYEQFSREKQSVLDSLKQRAKMVADTFNSIEGMSCNP-VQGAMYAFPQMKLPAKAIA 384 (509)
Q Consensus 306 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~ 384 (509)
..++.+.++. +....+.....+...++.+.|.+.|.+. |++++. ...+-.++++++
T Consensus 317 ------~IAAkAVaf~---------Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHlvLvDl~------- 373 (490)
T 3ou5_A 317 ------AIAAVAVALK---------QACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLR------- 373 (490)
T ss_dssp ------HHHHHHHHHH---------HHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECG-------
T ss_pred ------HHHHHHHHHH---------HHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceEEEEecc-------
Confidence 2223332221 2222335666777888888888888887 998863 344456666765
Q ss_pred HHhhcCCCCcHHHHHHHHhhcCeEEe
Q psy13922 385 KAKAEGKCPSVLYAFELLERTGICIV 410 (509)
Q Consensus 385 ~~~~~g~~~~~~~~~~ll~~~gI~v~ 410 (509)
..|+. -..+..+|++.||.+.
T Consensus 374 ---~~g~t--G~~ae~~Le~agItvN 394 (490)
T 3ou5_A 374 ---PKGLD--GARAERVLELVSITAN 394 (490)
T ss_dssp ---GGTCC--HHHHHHHHHHTTEECE
T ss_pred ---ccCCC--HHHHHHHHHHcCcEEC
Confidence 12332 2226889999999886
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=88.34 E-value=3.9 Score=38.81 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=68.7
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
+-.-+++|.|++..=..+.+.|.+.|. .|++..-.-......++..|.+...+..|-. |.+++++.++...
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga----~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA----RVFITGRRKDVLDAAIAEIGGGAVGIQADSA-----NLAELDRLYEKVK 98 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHcCCCeEEEEecCC-----CHHHHHHHHHHHH
Confidence 334567777776666677788888887 8888776655566667777888777776633 7788887776643
Q ss_pred cc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIKF 186 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~i 186 (509)
+. .++.++|-+.-.++.+. -++.++|+++.++
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHH
Confidence 32 35666554433333332 5678888888874
No 238
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=82.51 E-value=12 Score=34.44 Aligned_cols=101 Identities=14% Similarity=0.020 Sum_probs=64.0
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-..........+.++..+..|-. |.+.+++.++...+
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 76 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGA----TVIVSDINAEGAKAAAASIGKKARAIAADIS-----DPGSVKALFAEIQA 76 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHHHCTTEEECCCCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 34677777776666677788888887 8888776655555666666777777665533 67777777765432
Q ss_pred c-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 156 H-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 156 ~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
. .++.++|-+.-..+.+. ..+.+++++..+
T Consensus 77 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 77 LTGGIDILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2 35676664433333322 456677777665
No 239
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=79.60 E-value=18 Score=33.92 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=64.0
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
+....+++|.|+...=..+.+.|.+.|. .|++..-.-..........+.++..+..|-. |.+.+++.++..
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 95 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGA----YVVVADVNEDAAVRVANEIGSKAFGVRVDVS-----SAKDAESMVEKT 95 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHH
Confidence 3444677777776666677788888887 8887765544455555566777777766533 678887777654
Q ss_pred hcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-..+.+ ...+.++++++.+
T Consensus 96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 322 3566665443222222 2466777777665
No 240
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=79.15 E-value=21 Score=33.23 Aligned_cols=104 Identities=13% Similarity=0.040 Sum_probs=66.4
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
++-..+++|.|++.-=..+.+.|.+.|. .|++.+-.-..... .++..|.++..+..|-. |.+.+++.+
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga----~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-----~~~~v~~~~ 77 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA----RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-----DELAIEAAF 77 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC----EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHH
Confidence 3444567777776666677788888887 88887655443333 34456888888776633 778888888
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIKF 186 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~i 186 (509)
++..+. .++.++|-+.-.++.+. -++.++|+++.++
T Consensus 78 ~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 78 SKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 765443 45666654432333332 5678888888774
No 241
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=76.44 E-value=17 Score=33.39 Aligned_cols=102 Identities=13% Similarity=0.050 Sum_probs=53.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 76 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGA----TVLGLDLKPPAGEEPAAELGAAVRFRNADVT-----NEADATAALAFAK 76 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESSCC------------CEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHHhCCceEEEEccCC-----CHHHHHHHHHHHH
Confidence 344677777776666677778888887 7777654444444444445556666655532 6777777776543
Q ss_pred cc-CCceEEEEeCCCCCCCC------CCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTGQ------VLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG~------~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-..+.+. ..+.+++++..+
T Consensus 77 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 77 QEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp HHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHH
Confidence 22 35666664322222222 345667766655
No 242
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=76.17 E-value=16 Score=34.24 Aligned_cols=101 Identities=12% Similarity=0.008 Sum_probs=61.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...+.
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGC----HVLCADIDGDAADAAATKIGCGAAACRVDVS-----DEQQIIAMVDACVAA 100 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHCSSCEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHcCCcceEEEecCC-----CHHHHHHHHHHHHHH
Confidence 4577776666555666777888887 8887765545555555555666666665533 677777777654322
Q ss_pred -CCceEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q psy13922 157 -CNPRAIVIINPGNPTGQ--VLTKENIQDIIKF 186 (509)
Q Consensus 157 -~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~i 186 (509)
.++.++|-+.-..+.+. ..+.+++++..+.
T Consensus 101 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 101 FGGVDKLVANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp HSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 35676664422222222 4567777776653
No 243
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=75.94 E-value=22 Score=32.80 Aligned_cols=102 Identities=12% Similarity=0.027 Sum_probs=61.8
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA----EVLLTGRNESNIARIREEFGPRVHALRSDIA-----DLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHGGGEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhCCcceEEEccCC-----CHHHHHHHHHHHH
Confidence 345678887777666677788888887 8887765545555555555667777766533 6777777666532
Q ss_pred cc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+. .++.+++-+.-..+.+ ...+.+++++..+
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFA 111 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 22 2456555332222222 1346677777665
No 244
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=75.54 E-value=20 Score=33.39 Aligned_cols=102 Identities=7% Similarity=0.016 Sum_probs=61.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 96 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGA----IVGLHGTREDKLKEIAADLGKDVFVFSANLS-----DRKSIKQLAEVAE 96 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHCSSEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhCCceEEEEeecC-----CHHHHHHHHHHHH
Confidence 344677777776655677778888887 8877765545555556666777777776633 6777777776533
Q ss_pred cc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 97 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 97 REMEGIDILVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp HHHTSCCEEEECCCCC-----CCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 22 3566666432222222 2345566666554
No 245
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=75.48 E-value=23 Score=32.87 Aligned_cols=99 Identities=16% Similarity=0.021 Sum_probs=62.6
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH- 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~- 156 (509)
.|++|.|++.-=..+.+.|.+.|. .|++.+-.-...... ...+.++..+..|- -|.+.+++.++...+.
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga----~V~~~~~~~~~~~~~-~~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGD----KVCFIDIDEKRSADF-AKERPNLFYFHGDV-----ADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHH-HTTCTTEEEEECCT-----TSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHH-HHhcCCEEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 578888887777778888888887 888776543333333 33355566666553 3677887777664333
Q ss_pred CCceEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q psy13922 157 CNPRAIVIINPGNPTGQ--VLTKENIQDIIKF 186 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~i 186 (509)
.+..++|-+.-.++.+. -++.++|+++.++
T Consensus 74 g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 74 QRIDVLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp SCCCEEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 46776654433333332 5677888887764
No 246
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=75.39 E-value=25 Score=32.42 Aligned_cols=102 Identities=11% Similarity=0.075 Sum_probs=62.5
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-..........+.++..+..|- -|.+.+++.++...
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA----TVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHHHHHH
Confidence 334678887776666677788888887 888776555555555555666666666553 36778877776543
Q ss_pred cc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 32 3566666442222222 2456677776655
No 247
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=75.08 E-value=21 Score=32.46 Aligned_cols=100 Identities=16% Similarity=0.151 Sum_probs=58.3
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH- 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~- 156 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...+.
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGH----QVSMMGRRYQRLQQQELLLGNAVIGIVADLA-----HHEDVDVAFAAAVEWG 75 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHGGGEEEEECCTT-----SHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHhcCCceEEECCCC-----CHHHHHHHHHHHHHhc
Confidence 577777776666667778888887 8887765544444444444445566655532 677777777653322
Q ss_pred CCceEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q psy13922 157 CNPRAIVIINPGNPTGQ--VLTKENIQDIIKF 186 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~i 186 (509)
.++.++|-+.-..+.+. ..+.+++++..+.
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 35677665433222222 4566777776653
No 248
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=74.98 E-value=24 Score=32.94 Aligned_cols=100 Identities=16% Similarity=0.025 Sum_probs=60.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...+.
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~----~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 101 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGL----GVVIADLAAEKGKALADELGNRAEFVSTNVT-----SEDSVLAAIEAANQL 101 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHTTS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHHh
Confidence 4577777776666677788888887 8887765545555555666766777766533 678888877764221
Q ss_pred CCceEEEEe-CCCCCCC-------CCCCHHHHHHHHH
Q psy13922 157 CNPRAIVII-NPGNPTG-------QVLTKENIQDIIK 185 (509)
Q Consensus 157 ~~~~~ivi~-~p~NPtG-------~~~s~~~l~~l~~ 185 (509)
.+...++.+ ....+.+ ...+.+++++..+
T Consensus 102 ~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
T 3ppi_A 102 GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTID 138 (281)
T ss_dssp SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHH
T ss_pred CCCCeEEEccCcccccccccccccccCCHHHHHHHHH
Confidence 244555544 2222222 2456666666654
No 249
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=74.03 E-value=43 Score=30.65 Aligned_cols=102 Identities=11% Similarity=-0.017 Sum_probs=60.8
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.... ..++..|.++..+..|-. |.+.+++.++
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~ 76 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF----TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR-----NEDEVTAFLN 76 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC----EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC-----CHHHHHHHHH
Confidence 344678887776666677788888887 7877654444333 334445778888777633 6777777776
Q ss_pred hhhccCCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 152 EARKHCNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
...+..++.++|-+.-....+. ..+.+++++..+
T Consensus 77 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 77 AADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 5322224565554322222222 456677776655
No 250
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=73.81 E-value=19 Score=33.59 Aligned_cols=101 Identities=14% Similarity=0.058 Sum_probs=59.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC------------Chh---HHHHHHhcCCEEEEEecCCCCCCC
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ------------YPL---YSASLAEFNMEQIGYYLDESKQWG 140 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~------------y~~---~~~~~~~~g~~~~~v~~~~~~~~~ 140 (509)
...+++|.|+...=..+.+.|.+.|. .|++.+-. -.. ....++..|.++..+..|-.
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~---- 81 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGA----DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR---- 81 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT----
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC----eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC----
Confidence 34677787776666677788888887 77765322 111 12223445777777776633
Q ss_pred CCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 141 LPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 141 ~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
|.+.+++.+++..+. .++.++|-+.-..+.+...+.+++++..+
T Consensus 82 -~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 82 -DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp -CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhh
Confidence 677777777654322 35666664433333333466677776655
No 251
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=73.74 E-value=34 Score=31.33 Aligned_cols=102 Identities=12% Similarity=0.082 Sum_probs=62.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~ 78 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGA----KVVIVDRDKAGAERVAGEIGDAALAVAADIS-----KEADVDAAVEAAL 78 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHH
Confidence 344677887776655677778888877 8887765555555556666767777766533 6777777776533
Q ss_pred cc-CCceEEEEeCC-CCCCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINP-GNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p-~NPtG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.- ..+.+ ...+.+++++..+
T Consensus 79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 22 35666654422 22122 2346677776655
No 252
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=73.43 E-value=11 Score=39.03 Aligned_cols=111 Identities=13% Similarity=0.243 Sum_probs=67.7
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhc----CCCCC---CCeEEEcCCCCh-------------h------HHHHHHhcCCE
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIE----DVDGK---KPGVLIPIPQYP-------------L------YSASLAEFNME 127 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~----~gd~~---~~~Vlv~~p~y~-------------~------~~~~~~~~g~~ 127 (509)
++.+.|.+++.+..++...+++|.+ ...+. ....|...|.|. + +.+.+...+.+
T Consensus 98 v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~KlN 177 (507)
T 2gjx_A 98 INDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLN 177 (507)
T ss_dssp ESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCC
T ss_pred EeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhCCc
Confidence 4556788887777766666666643 11100 002333455543 1 23444556788
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 128 QIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 128 ~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
+..+.+.++.+|.+....+.++-+.. . ..|.+..|+++++++|++.|++++|-||--
T Consensus 178 ~lh~HltDdq~wr~ei~~~P~Lt~~G----a---------~~~~~~~YT~~di~eiv~yA~~rgI~VIPE 234 (507)
T 2gjx_A 178 VFHWHLVDDPSFPYESFTFPELMRKG----S---------YNPVTHIYTAQDVKEVIEYARLRGIRVLAE 234 (507)
T ss_dssp EEEEECCCSSCCCBCCSSCTHHHHHH----S---------SCTTTSCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred eEEEEEecccCeeeeccccchhhhcc----c---------cCCCCCCcCHHHHHHHHHHHHHcCCEEEEC
Confidence 88887776666766554433332221 0 124466899999999999999999999863
No 253
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=72.33 E-value=49 Score=30.11 Aligned_cols=101 Identities=13% Similarity=0.019 Sum_probs=58.0
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC-hhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY-PLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.- ......++..|.++..+..|-. |.+.+++.++...
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 77 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGA----DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS-----QPGDVEAFGKQVI 77 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEcCCchhHHHHHHHhcCCcEEEEEeecC-----CHHHHHHHHHHHH
Confidence 34577887776666677778888776 777654332 3233344455666666666532 6777777766532
Q ss_pred cc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 78 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 22 3566666443222222 2356677776655
No 254
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=72.28 E-value=32 Score=31.88 Aligned_cols=102 Identities=9% Similarity=-0.021 Sum_probs=61.7
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 80 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGA----RVVLADLPETDLAGAAASVGRGAVHHVVDLT-----NEVSVRALIDFTI 80 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEECTTSCHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHhCCCeEEEECCCC-----CHHHHHHHHHHHH
Confidence 344677777776666677788888887 8877665555555555665666666665532 6777777776533
Q ss_pred cc-CCceEEEEeCCCC-C-CC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGN-P-TG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~N-P-tG--~~~s~~~l~~l~~ 185 (509)
+. .+..++|-+.-.. + .+ ..++.+++++..+
T Consensus 81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 22 3566655432222 2 11 1456777777665
No 255
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=71.85 E-value=25 Score=32.55 Aligned_cols=100 Identities=10% Similarity=0.001 Sum_probs=56.2
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-......+...+...+..++. |.+.+++.++...
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~-------~~~~v~~~~~~~~ 94 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGH----RVIISYRTEHASVTELRQAGAVALYGDFS-------CETGIMAFIDLLK 94 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTC----CEEEEESSCCHHHHHHHHHTCEEEECCTT-------SHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHhcCCeEEECCCC-------CHHHHHHHHHHHH
Confidence 345688887776666677778888876 77766544444455555567555443332 6777777776543
Q ss_pred cc-CCceEEEEeCCC-CCCCCCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPG-NPTGQVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~-NPtG~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-. .+.....+.+++++..+
T Consensus 95 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 95 TQTSSLRAVVHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp HHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHH
T ss_pred HhcCCCCEEEECCCccCCCCCCCCHHHHHHHHH
Confidence 22 356666643221 12223344555555554
No 256
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=71.73 E-value=30 Score=31.66 Aligned_cols=102 Identities=13% Similarity=0.044 Sum_probs=59.3
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.+...+..|- -|.+.+++.++...
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 78 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGA----KVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVLKAIT 78 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHHHHHH
Confidence 334677777776555667778888887 888766554444444444444455555542 36777777776543
Q ss_pred cc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 79 DEFGGVDILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 22 3566665442222222 2356677777665
No 257
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=71.25 E-value=35 Score=31.69 Aligned_cols=100 Identities=13% Similarity=0.073 Sum_probs=64.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|++.-=..+.+.|.+.|. .|++.+-.-.... ..++..|.++..+..|-. |.+.+++.++..
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga----~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt-----~~~~v~~~~~~~ 78 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDS----IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS-----KKKDVEEFVRRT 78 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCC----EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHH
Confidence 4567777776666667777888887 8887665443333 334556888888887633 778888877664
Q ss_pred hcc-CCceEEEEeCC--CCCCC--CCCCHHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINP--GNPTG--QVLTKENIQDIIKF 186 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p--~NPtG--~~~s~~~l~~l~~i 186 (509)
.+. .++.++| +|. ..+.+ .-++.++|+++.++
T Consensus 79 ~~~~G~iDiLV-NNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 79 FETYSRIDVLC-NNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHHHSCCCEEE-ECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCcccCCCCChhhCCHHHHHHHHHH
Confidence 433 3566655 433 22333 25788899988874
No 258
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=71.18 E-value=58 Score=30.22 Aligned_cols=104 Identities=11% Similarity=0.006 Sum_probs=60.9
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC--hhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY--PLYSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y--~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
+.-.-+++|.|++.-=..+.+.|.+.|. .|++..-.- ......+...|.+...+..|-. |.+++++.++
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga----~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~ 75 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERA----IPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVA 75 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC----EEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHH
Confidence 3334566666665555666778888876 777654222 2233444556777777776533 6777777776
Q ss_pred hhhcc-CCceEEEEeCC-CCCCCCCCCHHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINP-GNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p-~NPtG~~~s~~~l~~l~~i 186 (509)
+..+. .+..++|-+.- +.+...-.+.++|++..++
T Consensus 76 ~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 76 QTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 54332 35666554321 2233346677888877764
No 259
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=71.05 E-value=49 Score=30.17 Aligned_cols=81 Identities=10% Similarity=-0.033 Sum_probs=48.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...+
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGA----SAVLLDLPNSGGEAQAKKLGNNCVFAPADVT-----SEKDVQTALALAKG 82 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEECTTSSHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCcHhHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 34678887776655677777887776 7776544333444444545656666665532 67777777764322
Q ss_pred c-CCceEEEEe
Q psy13922 156 H-CNPRAIVII 165 (509)
Q Consensus 156 ~-~~~~~ivi~ 165 (509)
. .++.++|-+
T Consensus 83 ~~g~id~li~~ 93 (265)
T 2o23_A 83 KFGRVDVAVNC 93 (265)
T ss_dssp HHSCCCEEEEC
T ss_pred HCCCCCEEEEC
Confidence 1 256666643
No 260
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=70.97 E-value=12 Score=39.06 Aligned_cols=117 Identities=16% Similarity=0.252 Sum_probs=70.4
Q ss_pred CCCCCCcEEEeCCHHHHHHHHHHHhhcC---CCCC-----C-C-----eEEEcCCCCh-------------------hHH
Q psy13922 72 QPADWQDVILSAGASDGIKSVLKLLIED---VDGK-----K-P-----GVLIPIPQYP-------------------LYS 118 (509)
Q Consensus 72 ~~~~~~~i~~t~G~~~al~~~~~~l~~~---gd~~-----~-~-----~Vlv~~p~y~-------------------~~~ 118 (509)
..++++.|.+++++..++...+++|.+- .... + . ..|...|.|. .+.
T Consensus 126 L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~i 205 (525)
T 3gh5_A 126 LITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQI 205 (525)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHH
Confidence 3355667888877777766666666431 1000 0 0 1344456543 123
Q ss_pred HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 119 ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 119 ~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
+.+...+.++..+.+.++.+|.+..+...++-... .. +......|-.|+++++++|++.|++++|-||--
T Consensus 206 d~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~G-----a~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIPE 275 (525)
T 3gh5_A 206 DLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIG-----SK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIPE 275 (525)
T ss_dssp HHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTT-----TS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHcCCcEEEEEeccCCccccccccchhhhhcc-----Cc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEEE
Confidence 44556678888888777667776665554433221 00 011123467899999999999999999998864
No 261
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=70.64 E-value=41 Score=30.85 Aligned_cols=103 Identities=13% Similarity=0.049 Sum_probs=60.8
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
+....+++|.|+...=..+.+.|.+.|. .|++..-.-..... .++..|.++..+..|-. |.+.+++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~ 80 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA----SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVT-----DEQHREAVI 80 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC----EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHH
Confidence 3344677777776666677778888887 78776554333332 23445777777776633 677777777
Q ss_pred Hhhhcc-CCceEEEEeCCC-CCCCCCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPG-NPTGQVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~-NPtG~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-. .+.....+.+++++..+
T Consensus 81 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 81 KAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 653322 356666644222 22222567777777655
No 262
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=70.57 E-value=62 Score=30.15 Aligned_cols=102 Identities=9% Similarity=-0.001 Sum_probs=61.5
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCh----------hHHHHHHhcCCEEEEEecCCCCCCCCCHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYP----------LYSASLAEFNMEQIGYYLDESKQWGLPIS 144 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~----------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 144 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-. .....++..|.++..+..|-. |.+
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~ 78 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGA----NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR-----DGD 78 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTC----EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT-----SHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC-----CHH
Confidence 344677887776666677788888877 7776543222 223344556788888877633 677
Q ss_pred HHHHHHHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 145 ELERSITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 145 ~L~~~i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.+++.++...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 79 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 79 AVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 877777654332 3567666443222222 2456777777665
No 263
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=70.44 E-value=56 Score=30.71 Aligned_cols=103 Identities=8% Similarity=0.052 Sum_probs=60.2
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC------------Chh---HHHHHHhcCCEEEEEecCCCCC
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ------------YPL---YSASLAEFNMEQIGYYLDESKQ 138 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~------------y~~---~~~~~~~~g~~~~~v~~~~~~~ 138 (509)
+....+++|.|+...=..+.+.|.+.|. .|++.+-. -.. ....++..|.++..+..|-.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-- 99 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGA----DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVR-- 99 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT--
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCC--
Confidence 3445677887776666667778888887 77765322 111 12233455777777777633
Q ss_pred CCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCC---CCCCHHHHHHHHH
Q psy13922 139 WGLPISELERSITEARKH-CNPRAIVIINPGNPTG---QVLTKENIQDIIK 185 (509)
Q Consensus 139 ~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG---~~~s~~~l~~l~~ 185 (509)
|.+.+++.++...+. .++.++|-+.-..+.+ ..++.+++++..+
T Consensus 100 ---~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 100 ---DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp ---CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 678887777653322 3566665442222222 2357777777665
No 264
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=69.70 E-value=52 Score=30.48 Aligned_cols=100 Identities=9% Similarity=0.037 Sum_probs=58.8
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++...
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 76 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGA----KILLGARRQARIEAIATEIRDAGGTALAQVLDVT-----DRHSVAAFAQAAV 76 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHH
Confidence 467776666555666777888887 787765443333332 3444777777776533 6777777776533
Q ss_pred cc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIKF 186 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~i 186 (509)
+. .++.++|-+.-..+.+. ..+.+++++..++
T Consensus 77 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 77 DTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 22 35666664432222222 4566777776653
No 265
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=69.69 E-value=51 Score=29.77 Aligned_cols=101 Identities=13% Similarity=0.066 Sum_probs=59.6
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.... ..++..+.++..+..|-. |.+.+++.++.
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 75 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA----TVVGTATSQASAEKFENSMKEKGFKARGLVLNIS-----DIESIQNFFAE 75 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHH
Confidence 34577777776655667778888887 7877655433332 333445777777766533 67888877766
Q ss_pred hhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++..+|-+.-..+.+ ...+.+++++..+
T Consensus 76 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 76 IKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp HHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 4332 3566666442222222 1446667766655
No 266
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=69.61 E-value=55 Score=30.85 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=60.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH---hcC-CEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA---EFN-MEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~---~~g-~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+ ..+ .++..+..|- -|.+.+++.+
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~ 110 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGA----NVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAA 110 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHH
Confidence 344577777766555667778888887 88776655444443333 333 4666666653 2677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIKF 186 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~i 186 (509)
+...+. .++.++|-+.-..+.+. .++.+++++..++
T Consensus 111 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 111 RTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 654322 35666664432222222 4577777777663
No 267
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=69.42 E-value=51 Score=30.60 Aligned_cols=101 Identities=10% Similarity=0.074 Sum_probs=59.5
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH----hcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA----EFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-........ ..|.++..+..|-. |.+.+++.++
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~ 97 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGC----HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR-----APPAVMAAVD 97 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTC----EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHH
Confidence 34577777776666677788888887 88876554433333322 24677777776633 6777777776
Q ss_pred hhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-....+ ..++.+++++..+
T Consensus 98 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 98 QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHH
Confidence 54322 3566665432222222 2356677777665
No 268
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=69.21 E-value=49 Score=30.17 Aligned_cols=100 Identities=15% Similarity=0.065 Sum_probs=56.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|- -|.+.+++.++...+.
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 77 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGA----KVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVMAAVQRR 77 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 4577776666555667777887777 787766543333444444455566665543 2677777777653222
Q ss_pred -CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 157 -CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 157 -~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.++.++|-+.-..+.+ ...+.+++++..+
T Consensus 78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3466665432222222 2346666766655
No 269
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=68.63 E-value=56 Score=30.17 Aligned_cols=102 Identities=12% Similarity=0.146 Sum_probs=57.9
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----HhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL----AEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-....... +..|.++..+..|-. |.+.+++++
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~ 90 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGC----SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVS-----NYEEVKKLL 90 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHH
Confidence 334677887776666677778888877 7777654433333222 223666766665532 677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-....+ ...+.++++++.+
T Consensus 91 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 91 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 653222 3566666432222222 2356667776655
No 270
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=68.39 E-value=46 Score=30.87 Aligned_cols=103 Identities=10% Similarity=0.018 Sum_probs=61.4
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
+....+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|- -|.+.+++.+
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~ 94 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA----RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAF 94 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC----EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHH
Confidence 3445677777776666677788888887 888876554433333 334466777666553 3678888777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 95 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 95 ARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp HHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 654332 3566666442222222 2457777777665
No 271
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=68.34 E-value=52 Score=27.53 Aligned_cols=111 Identities=11% Similarity=0.052 Sum_probs=68.3
Q ss_pred CCCCCCCcEEEeCCH--HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHH
Q psy13922 71 GQPADWQDVILSAGA--SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELER 148 (509)
Q Consensus 71 g~~~~~~~i~~t~G~--~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 148 (509)
|..++...++++-+. .+.+..+.+.|.+-|- +|+.+.. ....++..|.++..+.-..+++-.-+..++.+
T Consensus 19 g~~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf----~i~AT~G----Ta~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d 90 (143)
T 2yvq_A 19 GFKIPQKGILIGIQQSFRPRFLGVAEQLHNEGF----KLFATEA----TSDWLNANNVPATPVAWPSQEGQNPSLSSIRK 90 (143)
T ss_dssp SCCCCCSEEEEECCGGGHHHHHHHHHHHHTTTC----EEEEEHH----HHHHHHHTTCCCEEECCGGGC-----CBCHHH
T ss_pred CCCCCCCCEEEEecccchHHHHHHHHHHHHCCC----EEEECch----HHHHHHHcCCeEEEEEeccCCCcccccccHHH
Confidence 444544457777665 5556667777877776 7776653 34556778988888753322100001135777
Q ss_pred HHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 149 SITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 149 ~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
.|.+. ++.+|+ +.|. +..-+..+-..|.+.|-+|+++++..
T Consensus 91 ~i~~g----~i~lVI-nt~~---~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 91 LIRDG----SIDLVI-NLPN---NNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp HHHTT----SCCEEE-ECCC---CCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred HHHCC----CceEEE-ECCC---CCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 78774 566655 4442 22234677888999999999998764
No 272
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=68.14 E-value=28 Score=32.38 Aligned_cols=100 Identities=10% Similarity=0.081 Sum_probs=59.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-..........+.++..+..|- -|.+.+++.++...+.
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGD----TVIGTARRTEALDDLVAAYPDRAEAISLDV-----TDGERIDVVAADVLAR 76 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSGGGGHHHHHHCTTTEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHhccCCceEEEeeC-----CCHHHHHHHHHHHHHh
Confidence 3577776666555667777888887 888776655556666666666666666553 2677777777653222
Q ss_pred -CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 157 -CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 157 -~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.++.+++-+.-..+.+ ...+.+++++..+
T Consensus 77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 77 YGRVDVLVNNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp HSCCSEEEECCCCEEECCTTTCCHHHHHHHHH
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 3566665432222212 1456677776655
No 273
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=67.58 E-value=71 Score=29.51 Aligned_cols=102 Identities=6% Similarity=-0.064 Sum_probs=60.4
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC----------hhHHHHHHhcCCEEEEEecCCCCCCCCCHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY----------PLYSASLAEFNMEQIGYYLDESKQWGLPIS 144 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y----------~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 144 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.- ......++..|.++..+..|-. |.+
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~ 75 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGA----NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR-----EED 75 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT-----CHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC----EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHH
Confidence 345677887776666677778888887 777654322 1223334555888888877643 677
Q ss_pred HHHHHHHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 145 ELERSITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 145 ~L~~~i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.+++.++...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 76 ~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 76 QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHh
Confidence 777777654332 3566665442222222 2456677776655
No 274
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=67.42 E-value=52 Score=30.04 Aligned_cols=100 Identities=14% Similarity=0.064 Sum_probs=56.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...+.
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGA----RVVLADVLDEEGAATARELGDAARYQHLDVT-----IEEDWQRVVAYAREE 76 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHTTGGGEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHH
Confidence 4577777766655677777888877 7777654433333444444555665655532 677777777643222
Q ss_pred -CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 157 -CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 157 -~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.++.++|-+.-..+.+ ...+.+++++..+
T Consensus 77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2566666432222222 1346666666554
No 275
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=67.18 E-value=49 Score=30.79 Aligned_cols=100 Identities=17% Similarity=0.048 Sum_probs=58.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++..
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 95 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGI----AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVT-----STDEVHAAVAAA 95 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHH
Confidence 3577777776666677778888887 787765443333332 3344667777766533 677777777654
Q ss_pred hcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-..+.+ ...+.++++++.+
T Consensus 96 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 96 VERFGPIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp HHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 322 3566655442222222 2356677776655
No 276
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=66.95 E-value=39 Score=31.43 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=59.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...+.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGY----GVALAGRRLDALQETAAEIGDDALCVPTDVT-----DPDSVRALFTATVEK 99 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHTSCCEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHhCCCeEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 3466666665555566777888887 8887765545555555666666666665532 677777777653322
Q ss_pred -CCceEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q psy13922 157 -CNPRAIVIINPG-NPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 157 -~~~~~ivi~~p~-NPtG--~~~s~~~l~~l~~ 185 (509)
.++.++|-+.-. .+.+ ..++.+++++..+
T Consensus 100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 356666543222 2212 2456777777665
No 277
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=66.69 E-value=64 Score=29.95 Aligned_cols=102 Identities=11% Similarity=0.036 Sum_probs=58.5
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC----------------ChhHH---HHHHhcCCEEEEEecCC
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ----------------YPLYS---ASLAEFNMEQIGYYLDE 135 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~----------------y~~~~---~~~~~~g~~~~~v~~~~ 135 (509)
....+++|.|+...=..+.+.|.+.|. .|++.+-. -.... ..+...+.++..+..|-
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 85 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA----DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV 85 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC----eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence 345677787776666677788888887 77765322 11111 22334566777777663
Q ss_pred CCCCCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCC---CCCHHHHHHHHH
Q psy13922 136 SKQWGLPISELERSITEARKH-CNPRAIVIINPGNPTGQ---VLTKENIQDIIK 185 (509)
Q Consensus 136 ~~~~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~---~~s~~~l~~l~~ 185 (509)
. |.+.+++.++...+. .++.++|-+.-....+. ..+.+++++..+
T Consensus 86 ~-----~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 86 R-----DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp T-----CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred C-----CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHH
Confidence 3 677777777653322 35666554422222222 356777777665
No 278
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=66.35 E-value=15 Score=38.08 Aligned_cols=70 Identities=19% Similarity=0.393 Sum_probs=45.6
Q ss_pred HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 119 ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 119 ~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
+.+...+.++..+.+.++.+|.+.+....++-+.. .. + ......|-.|+++++++|++.|++++|-||--
T Consensus 181 d~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~g-a~-~-------~~~~~~~g~YT~~di~eiv~yA~~rgI~VIPE 250 (512)
T 1jak_A 181 DRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYG-GS-T-------EVGGGPGGYYTKAEYKEIVRYAASRHLEVVPE 250 (512)
T ss_dssp HHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTT-TS-C-------CTTSSCCCCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHcCCcEEEEEeccCCCceehhhhhHHHHhhc-Cc-c-------ccCCCCCCCCCHHHHHHHHHHHHHcCCEEEEc
Confidence 34445677777777766666776655544432221 00 0 11122367899999999999999999999863
No 279
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=66.07 E-value=65 Score=29.71 Aligned_cols=100 Identities=9% Similarity=0.019 Sum_probs=57.2
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC------------ChhH---HHHHHhcCCEEEEEecCCCCCC
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ------------YPLY---SASLAEFNMEQIGYYLDESKQW 139 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~------------y~~~---~~~~~~~g~~~~~v~~~~~~~~ 139 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-. -... ...+...|.++..+..|-.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--- 84 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA----DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVR--- 84 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTT---
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC----eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCC---
Confidence 344677887776666677788888887 77765422 1111 1223445777777776633
Q ss_pred CCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHH
Q psy13922 140 GLPISELERSITEARKH-CNPRAIVIINPGNPTGQVLTKENIQDIIK 185 (509)
Q Consensus 140 ~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ 185 (509)
|.+.+++.++...+. .++.++|-+.-..+.+. +.+++++..+
T Consensus 85 --~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 85 --DRESLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp --CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHH
Confidence 678887777653322 35666664422222222 4566666554
No 280
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=65.99 E-value=88 Score=30.28 Aligned_cols=101 Identities=8% Similarity=0.032 Sum_probs=59.4
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCh----------hHHHHHHhcCCEEEEEecCCCCCCCCCHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYP----------LYSASLAEFNMEQIGYYLDESKQWGLPISE 145 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~----------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 145 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-. .....++..|.++..+..|-. |.+.
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga----~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~ 115 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGA----NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR-----DEQQ 115 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTC----EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT-----CHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCC----EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC-----CHHH
Confidence 34577777666555667777888776 7776532221 233445566888888877633 7788
Q ss_pred HHHHHHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 146 LERSITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 146 L~~~i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
++++++...+. .++.++|-+.-....+ ...+.++++++.+
T Consensus 116 v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 116 ISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 88777754332 3566666442222222 2456677766554
No 281
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=65.70 E-value=71 Score=28.95 Aligned_cols=101 Identities=11% Similarity=0.015 Sum_probs=57.5
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++.
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----~~~~~~~~~~~ 77 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGA----AVAIAARRVEKLRALGDELTAAGAKVHVLELDVA-----DRQGVDAAVAS 77 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHH
Confidence 34678887776666677778888877 777764432222222 2233666666666533 67777777765
Q ss_pred hhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-..+.+. ..+.++++++.+
T Consensus 78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 78 TVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 3222 35666664432222222 356677776665
No 282
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=65.37 E-value=43 Score=31.04 Aligned_cols=102 Identities=9% Similarity=0.049 Sum_probs=59.1
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC-------------CChhH---HHHHHhcCCEEEEEecCCCCC
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP-------------QYPLY---SASLAEFNMEQIGYYLDESKQ 138 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p-------------~y~~~---~~~~~~~g~~~~~v~~~~~~~ 138 (509)
....+++|.|+...=..+.+.|.+.|. .|++.+- .-... ...+...+.++..+..|-.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-- 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA----DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR-- 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT--
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC----EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC--
Confidence 344677777776666677788888887 7776532 11111 2223445677777776633
Q ss_pred CCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 139 WGLPISELERSITEARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 139 ~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
|.+.+++.++...+. .++.++|-+.-..+.+. ..+.+++++..+
T Consensus 84 ---~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 84 ---DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp ---CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 778888777653322 35666664422222222 456677777665
No 283
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=65.14 E-value=39 Score=31.32 Aligned_cols=103 Identities=12% Similarity=0.020 Sum_probs=59.3
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC-CChh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP-QYPL---YSASLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p-~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
+....+++|.|+...=..+.+.|.+.|. .|++..- .-.. ....++..|.++..+..|-. |.+.+++.
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----d~~~v~~~ 96 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGA----KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVS-----QESEVEAL 96 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHH
Confidence 3444677777766655667778888887 7776543 2121 22334445777777776633 67787777
Q ss_pred HHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 150 ITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 150 i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
++...+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 97 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 97 FAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 7654322 3566666442222222 2456677777665
No 284
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=65.02 E-value=78 Score=29.24 Aligned_cols=102 Identities=14% Similarity=0.030 Sum_probs=59.1
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC------------Chh---HHHHHHhcCCEEEEEecCCCCCC
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ------------YPL---YSASLAEFNMEQIGYYLDESKQW 139 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~------------y~~---~~~~~~~~g~~~~~v~~~~~~~~ 139 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-. -.. ....++..|.++..+..|-.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~--- 81 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGA----DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK--- 81 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT---
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC----eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC---
Confidence 334677777776655677788888887 77765432 111 12233455777777776633
Q ss_pred CCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 140 GLPISELERSITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 140 ~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
|.+.+++.++...+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 82 --~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 82 --DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp --CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 677777777654322 3566666432222222 2456777777655
No 285
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=65.00 E-value=42 Score=31.02 Aligned_cols=104 Identities=13% Similarity=0.033 Sum_probs=60.4
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh----HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHH
Q psy13922 73 PADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL----YSASLAEFNMEQIGYYLDESKQWGLPISELER 148 (509)
Q Consensus 73 ~~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 148 (509)
.+....+++|.|+...=..+.+.|.+.|. .|++..-.-.. ....++..|.++..+..|-. |.+.+++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~ 96 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL----KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAA-----SESDFIE 96 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHH
Confidence 34455678887776655677778888876 77765432222 22334455777777776633 6777777
Q ss_pred HHHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 149 SITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 149 ~i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.++...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 97 ~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 97 AIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 77653322 3566666442222222 2456677766655
No 286
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=64.96 E-value=75 Score=29.03 Aligned_cols=101 Identities=11% Similarity=-0.050 Sum_probs=59.3
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-...... +...|.++..+..|-. |.+.+++.++.
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~ 99 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGA----RVVLTARDVEKLRAVEREIVAAGGEAESHACDLS-----HSDAIAAFATG 99 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHH
Confidence 34577777766555666777888877 787765544433332 3345777777766533 67777777765
Q ss_pred hhcc-CCceEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPG-NPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~-NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-. .+.+ ...+.+++++..+
T Consensus 100 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp HHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 3222 356776644322 2222 2356677766654
No 287
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=64.56 E-value=85 Score=28.65 Aligned_cols=102 Identities=10% Similarity=0.126 Sum_probs=58.1
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|+...=..+.+.|.+.|. .|++. ...-.... ..++..|.++..+..|-. |.+.+++.+
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~ 77 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA----NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLT-----NAAEVEAAI 77 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTT-----CHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHH
Confidence 344677777776655677778888887 77765 43333322 233445666666666533 677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCC-CCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGN-PTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~N-PtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-.. +.+ ...+.+++++..+
T Consensus 78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 78 SAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp HHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHH
Confidence 654322 3455555332111 222 2456677776655
No 288
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=64.49 E-value=64 Score=29.21 Aligned_cols=99 Identities=12% Similarity=0.104 Sum_probs=54.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..|...+. .| --|.+.+++.++...+.
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~--~D-----~~~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGA----RLVACDIEEGPLREAAEAVGAHPVV--MD-----VADPASVERGFAEALAH 74 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHTTTCEEEE--CC-----TTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHcCCEEEE--ec-----CCCHHHHHHHHHHHHHH
Confidence 4577777766655667777887777 7777654433333444444644443 33 22677777776653222
Q ss_pred -CCceEEEEeCCCCCCC--CCCCHHHHHHHHHH
Q psy13922 157 -CNPRAIVIINPGNPTG--QVLTKENIQDIIKF 186 (509)
Q Consensus 157 -~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~i 186 (509)
.++.++|-+.-..+.+ ...+.+++++..+.
T Consensus 75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3566666432222222 23466777766653
No 289
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=64.30 E-value=54 Score=30.14 Aligned_cols=102 Identities=10% Similarity=0.005 Sum_probs=59.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC---hh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY---PL---YSASLAEFNMEQIGYYLDESKQWGLPISELER 148 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y---~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 148 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.- .. ....++..|.++..+..|-. |.+.+++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~ 80 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV----NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS-----NEEEVAK 80 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC----EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCC-----SHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHH
Confidence 344677887776666677788888887 777753211 11 12233445778888877633 6788877
Q ss_pred HHHhhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 149 SITEARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 149 ~i~~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
.++...+. .++.++|-+.-..+.+. ..+.+++++..+
T Consensus 81 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 120 (262)
T 3ksu_A 81 LFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDT 120 (262)
T ss_dssp HHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 77654322 34566554322222222 356677776655
No 290
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=63.87 E-value=28 Score=32.62 Aligned_cols=77 Identities=12% Similarity=0.052 Sum_probs=52.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++..
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~- 84 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGA----TVIMAVRDTRKGEAAARTMAGQVEVRELDLQ-----DLSSVRRFADGV- 84 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHTTSSSEEEEEECCTT-----CHHHHHHHHHTC-
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHhcCCeeEEEcCCC-----CHHHHHHHHHhc-
Confidence 344678887776666677778888887 8887765544555555666777777776633 788888888763
Q ss_pred ccCCceEEE
Q psy13922 155 KHCNPRAIV 163 (509)
Q Consensus 155 ~~~~~~~iv 163 (509)
.++.++|
T Consensus 85 --~~iD~lv 91 (291)
T 3rd5_A 85 --SGADVLI 91 (291)
T ss_dssp --CCEEEEE
T ss_pred --CCCCEEE
Confidence 1355554
No 291
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=63.85 E-value=23 Score=36.70 Aligned_cols=109 Identities=10% Similarity=0.110 Sum_probs=66.6
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhhc---CCCCCCCe-----EEEcCCCCh-------------h------HHHHHHhcC
Q psy13922 73 PADWQDVILSAGASDGIKSVLKLLIE---DVDGKKPG-----VLIPIPQYP-------------L------YSASLAEFN 125 (509)
Q Consensus 73 ~~~~~~i~~t~G~~~al~~~~~~l~~---~gd~~~~~-----Vlv~~p~y~-------------~------~~~~~~~~g 125 (509)
.++.+.|.+++.+..++...+++|.+ ..+ .+.. .|...|.|. + +.+.+...+
T Consensus 103 ~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~-~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~K 181 (507)
T 1now_A 103 LVKEPVAVLKANRVWGALRGLETFSQLVYQDS-YGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNK 181 (507)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHHHHCEECT-TSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHTT
T ss_pred EEcCCeEEEEECCHHHHHHHHHHHHHHHhhcc-CceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHhC
Confidence 35566788887777776666666643 111 0111 233445543 1 234445567
Q ss_pred CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 126 MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 126 ~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
.++..+.+.++.+|.+....+.++-+.. .- .| |..|+++++++|++.|++++|-||-
T Consensus 182 lN~lh~HltDdq~wr~e~~~~P~Lt~~G----a~---------~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 182 FNVLHWHIVDDQSFPYQSITFPELSNKG----SY---------SL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp CCEEEEECCCSSCCCBCCSSCHHHHHHH----SS---------ST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEeeccCccceeeccchhhhhccc----Cc---------CC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 7788877766666766554443332221 00 12 6789999999999999999999985
No 292
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=63.55 E-value=1.2e+02 Score=30.25 Aligned_cols=103 Identities=9% Similarity=-0.003 Sum_probs=53.6
Q ss_pred CcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHhhc-CCCCCCCeEEEcCCCCh---------------
Q psy13922 52 SPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLLIE-DVDGKKPGVLIPIPQYP--------------- 115 (509)
Q Consensus 52 ~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~p~y~--------------- 115 (509)
+.|...--+.--+|.+..-...-....+++|.|++.-=..+...|.. .|. .|++..-.-.
T Consensus 23 p~gc~~~v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA----~Vv~~~~~~~~~~~~~~~~gwyn~~ 98 (405)
T 3zu3_A 23 PTGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGA----DTLGVFFERPGEEGKPGTSGWYNSA 98 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC----EEEEEECCCCCBTTBCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC----EEEEEeCCchhhhhhcccccchhHH
Confidence 34555433333345554422112233466666655444455666776 776 7765321110
Q ss_pred hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-CCceEEE
Q psy13922 116 LYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-CNPRAIV 163 (509)
Q Consensus 116 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~~~~~iv 163 (509)
.....++..|.+...+..|- -|.+.+++.++...+. .++.++|
T Consensus 99 ~~~~~~~~~G~~a~~i~~Dv-----td~~~v~~~v~~i~~~~G~IDiLV 142 (405)
T 3zu3_A 99 AFHKFAAQKGLYAKSINGDA-----FSDEIKQLTIDAIKQDLGQVDQVI 142 (405)
T ss_dssp HHHHHHHHTTCCEEEEESCT-----TSHHHHHHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEE
Confidence 02234456688888777663 3778887777664332 3455544
No 293
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=63.54 E-value=49 Score=30.23 Aligned_cols=101 Identities=13% Similarity=0.014 Sum_probs=55.6
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh---c--C-CEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE---F--N-MEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~---~--g-~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+. . + .++..+..|-. |.+.+++.
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~ 77 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGY----RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT-----DCTKADTE 77 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTC----EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTT-----CHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCC-----CHHHHHHH
Confidence 34577777776655677777888777 887766544433333322 1 2 45555555532 67777777
Q ss_pred HHhhhcc-CCceEEEEeCCCCC-CCCCCCHHHHHHHHH
Q psy13922 150 ITEARKH-CNPRAIVIINPGNP-TGQVLTKENIQDIIK 185 (509)
Q Consensus 150 i~~~~~~-~~~~~ivi~~p~NP-tG~~~s~~~l~~l~~ 185 (509)
++...+. .++.++|-+.-... .....+.+++++..+
T Consensus 78 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 78 IKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHH
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHH
Confidence 7654322 35666554322222 222445566666554
No 294
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=63.54 E-value=38 Score=31.32 Aligned_cols=102 Identities=13% Similarity=0.069 Sum_probs=58.6
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC-Chh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ-YPL---YSASLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~-y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-. -.. ....++..|.++..+..|-. |.+.+++.+
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~ 87 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA----KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIR-----QVPEIVKLF 87 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHH
Confidence 334577777766555667778888887 77764322 121 22334455777777776633 678887777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-..+.+. .++.+++++..+
T Consensus 88 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 88 DQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 654322 35666653322222222 346677777665
No 295
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=63.46 E-value=38 Score=30.36 Aligned_cols=98 Identities=14% Similarity=0.041 Sum_probs=59.1
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccC
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHC 157 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~ 157 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++....
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~-- 71 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGK----ATYLTGRSESKLSTVTNCLSNNVGYRARDLA-----SHQEVEQLFEQLDS-- 71 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTC----CEEEEESCHHHHHHHHHTCSSCCCEEECCTT-----CHHHHHHHHHSCSS--
T ss_pred EEEEecCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHhhccCeEeecCC-----CHHHHHHHHHHHhh--
Confidence 478887777666677778888887 7777765555555555655666666655533 68888888876321
Q ss_pred CceEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q psy13922 158 NPRAIVIINPGNPTGQ--VLTKENIQDIIKF 186 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~--~~s~~~l~~l~~i 186 (509)
...+++-+....+.+. ..+.+++++..+.
T Consensus 72 ~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 72 IPSTVVHSAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred cCCEEEEeCCcCCCCccccCCHHHHHHHHHH
Confidence 2244443322222222 4566777766653
No 296
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=63.32 E-value=88 Score=28.50 Aligned_cols=102 Identities=8% Similarity=0.013 Sum_probs=56.1
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH---hc-CCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA---EF-NMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~---~~-g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+ .. |.++..+..|-. |.+.+++.+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-----~~~~~~~~~ 76 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGA----HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVA-----TPEGVDAVV 76 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----SHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHH
Confidence 334678887776666677777888777 77776543222222222 22 656666665532 677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 77 ESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp HHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 653222 2566666432222112 1346666666554
No 297
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=63.26 E-value=70 Score=30.09 Aligned_cols=102 Identities=14% Similarity=0.106 Sum_probs=59.7
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~ 100 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGA----RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR-----HLDEMVRLAD 100 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHH
Confidence 334677777776655667777888887 787766544433333 3344667777766533 6777777776
Q ss_pred hhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-....+. ..+.+++++..+
T Consensus 101 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 101 EAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 53322 35666664422222222 456677776655
No 298
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=63.25 E-value=74 Score=29.52 Aligned_cols=103 Identities=10% Similarity=-0.006 Sum_probs=60.6
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
+....+++|.|+...=..+.+.|.+.|. .|++..-.-..... .+...|.++..+..|-. |.+.+++.+
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~ 100 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA----QVAVAARHSDALQVVADEIAGVGGKALPIRCDVT-----QPDQVRGML 100 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHH
Confidence 3445678887776666677778888887 77776544333332 33445666666666533 677887777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-....+ ...+.++++++.+
T Consensus 101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 101 DQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 654322 3567766442222222 2456777777665
No 299
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=62.72 E-value=91 Score=29.11 Aligned_cols=102 Identities=12% Similarity=0.078 Sum_probs=59.6
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh----HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL----YSASLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.. ....++..|.++..+..|-. |.+.+++.+
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~ 116 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA----NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLS-----DEQHCKDIV 116 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTT-----SHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHH
Confidence 334678887776666677788888887 77766443332 22334456777777776633 677777777
Q ss_pred Hhhhcc-CCceEEEEeCC-CCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINP-GNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p-~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.- ..+.+ ...+.++++++.+
T Consensus 117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3ijr_A 117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFR 155 (291)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHH
Confidence 653322 35666554322 12222 1246677777665
No 300
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=62.72 E-value=86 Score=28.71 Aligned_cols=104 Identities=12% Similarity=0.036 Sum_probs=59.7
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh----c-CCEEEEEecCCCCCCCCCHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE----F-NMEQIGYYLDESKQWGLPISELER 148 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~----~-g~~~~~v~~~~~~~~~~d~~~L~~ 148 (509)
+....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+. . +.++..+..|-. |.+.+++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----~~~~v~~ 76 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA----AVAFCARDGERLRAAESALRQRFPGARLFASVCDVL-----DALQVRA 76 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTT-----CHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC-----CHHHHHH
Confidence 3444677887776666677788888887 787766543333333222 3 334666666533 6777777
Q ss_pred HHHhhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q psy13922 149 SITEARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIKF 186 (509)
Q Consensus 149 ~i~~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~i 186 (509)
.++...+. .++.++|-+.-..+.+. ..+.+++++..+.
T Consensus 77 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 77 FAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77654322 35666654432222222 4567777776664
No 301
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=62.65 E-value=54 Score=30.37 Aligned_cols=103 Identities=10% Similarity=0.074 Sum_probs=60.1
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPL---YSASLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
+....+++|.|+...=..+.+.|.+.|. .|++. ...-.. ....++..|.++..+..|-. |.+.+++.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~----~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~ 99 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGA----AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNR-----DAEAIEQA 99 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHH
Confidence 4445678887776666677778888887 77765 322122 22334455777777776633 77888777
Q ss_pred HHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 150 ITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 150 i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
++...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 100 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 100 IRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 7654322 3566665432222222 2456677777665
No 302
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=62.62 E-value=67 Score=29.45 Aligned_cols=102 Identities=10% Similarity=0.025 Sum_probs=60.4
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-...... +...|.++..+..|-. |.+.+++.++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~ 80 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGA----DLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT-----DDAQVAHLVD 80 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcC----EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHH
Confidence 344677887776655677778888887 788766544433332 3344677777776633 6788877776
Q ss_pred hhhcc-CCceEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPG-NPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~-NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-. .+.+ ...+.+++++..+
T Consensus 81 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 81 ETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp HHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHH
Confidence 54332 356665543212 1222 2456677777655
No 303
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=62.56 E-value=55 Score=31.18 Aligned_cols=102 Identities=9% Similarity=-0.053 Sum_probs=58.4
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC----------Ch---hHHHHHHhcCCEEEEEecCCCCCCCCC
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ----------YP---LYSASLAEFNMEQIGYYLDESKQWGLP 142 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~----------y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d 142 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-. -. .....+...|.++..+..|-. |
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~----~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d 97 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGA----RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVA-----D 97 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC----EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTT-----S
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCC-----C
Confidence 34567776666555666777888887 88776432 12 223334456777777766633 6
Q ss_pred HHHHHHHHHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHHH
Q psy13922 143 ISELERSITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIKF 186 (509)
Q Consensus 143 ~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~i 186 (509)
.+.+++.++...+. .++.++|-+.-....+ ...+.+++++..++
T Consensus 98 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 98 WDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77777777653322 3566655332222222 24566777776653
No 304
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=62.20 E-value=85 Score=29.13 Aligned_cols=102 Identities=11% Similarity=-0.020 Sum_probs=58.9
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCh-hHHHHH---Hh-cCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYP-LYSASL---AE-FNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~-~~~~~~---~~-~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-. ...... .. .+.++..+..|- -|.+.+++.
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~ 94 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGA----NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADM 94 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHH
Confidence 344678887777666677788888887 8887654222 222222 22 256677666553 367888877
Q ss_pred HHhhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 150 ITEARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 150 i~~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
++...+. .++.++|-+.-..+.+. ..+.+++++..+
T Consensus 95 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 133 (281)
T 3v2h_A 95 MAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIA 133 (281)
T ss_dssp HHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 7654332 35666654422222222 346677777665
No 305
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=62.11 E-value=58 Score=30.01 Aligned_cols=101 Identities=15% Similarity=0.150 Sum_probs=56.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.++...+
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~ 76 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGA----SLVAVDREERLLAEAVAALEAEAIAVVADVS-----DPKAVEAVFAEALE 76 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHTCCSSEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhcCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 34577887776666677777888777 7877654433344444555445555655532 67777777765322
Q ss_pred c-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 156 H-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 156 ~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
. .++.++|-+.-..+.+ ...+.++++++.+
T Consensus 77 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 77 EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp HHSCCCEEEEGGGGTTTTC----CHHHHHHHHH
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2 3566666432222222 2345566665554
No 306
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=62.07 E-value=72 Score=28.85 Aligned_cols=102 Identities=9% Similarity=-0.044 Sum_probs=59.6
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..+.++..+..|-. |.+.+++.++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~ 78 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA----AVVVADINAEAAEAVAKQIVADGGTAISVAVDVS-----DPESAKAMAD 78 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHH
Confidence 344678887776666677788888887 787766544433333 3344777777776633 6777777776
Q ss_pred hhhcc-CCceEEEEeCCC---CCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPG---NPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~---NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-. .+.+ ...+.+++++..+
T Consensus 79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 79 RTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 53322 356666533211 1111 2356677776655
No 307
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=61.99 E-value=76 Score=29.02 Aligned_cols=99 Identities=6% Similarity=-0.006 Sum_probs=57.9
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
.+++|.|+...=..+.+.|.+.|. .|++. .-.-..... .++..|.++..+..|-. |.+.+++.++..
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~----~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~ 76 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGY----NIVINYARSKKAALETAEEIEKLGVKVLVVKANVG-----QPAKIKEMFQQI 76 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCC----EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHH
Confidence 467777666555667777888887 77764 444333322 23445667777776633 678888777654
Q ss_pred hcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 77 DETFGRLDVFVNNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp HHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 322 3566666443222222 2456777777665
No 308
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=61.65 E-value=80 Score=28.78 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=58.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH---HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---AEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-....... +..+.++..+..|-. |.+.+++.++..
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~ 77 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGA----RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVR-----NTDDIQKMIEQI 77 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHH
Confidence 4567776666555667777888887 8877655443333333 234566776666533 677777777654
Q ss_pred hcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIKF 186 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~i 186 (509)
.+. .++.++|-+.-..+.+ ..++.+++++..++
T Consensus 78 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 78 DEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 322 3566665432222222 24567777776664
No 309
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=61.56 E-value=65 Score=29.89 Aligned_cols=102 Identities=10% Similarity=-0.041 Sum_probs=56.8
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL---YSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.. ....+...|.++..+..|-. |.+.+++.++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~~~~~~~ 102 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA----HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLS-----EAGAGTDLIE 102 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTT-----STTHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCC-----CHHHHHHHHH
Confidence 445677777776666677778888887 77765433222 23334445777777766533 4455555554
Q ss_pred hhhccCCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 152 EARKHCNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
...+..++.++|-+.-..+.+. ..+.+++++..+
T Consensus 103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 103 RAEAIAPVDILVINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3222125666664432222222 456677777665
No 310
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=61.55 E-value=80 Score=28.86 Aligned_cols=101 Identities=15% Similarity=0.001 Sum_probs=54.9
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|- -|.+.+++.++...+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 77 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGA----KVVFGDILDEEGKAMAAELADAARYVHLDV-----TQPAQWKAAVDTAVT 77 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHTGGGEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhhcCceEEEecC-----CCHHHHHHHHHHHHH
Confidence 34577777766555667777887777 777754433333333333333344455442 267777777764322
Q ss_pred c-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 156 H-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 156 ~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
. .++.++|-+......+ ...+.+++++..+
T Consensus 78 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 110 (260)
T 1nff_A 78 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILD 110 (260)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2 2566666442222222 1356667766555
No 311
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=61.49 E-value=88 Score=28.46 Aligned_cols=100 Identities=10% Similarity=-0.033 Sum_probs=55.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh-HHHHHHh---c-CCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL-YSASLAE---F-NMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~-~~~~~~~---~-g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.. .....+. . |.++..+..|-. |.+.+++.++
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~ 75 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGA----DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS-----KGEAVRGLVD 75 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTT-----SHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCC----EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCC-----CHHHHHHHHH
Confidence 3577776666555667777888877 78776544333 2222222 1 666666655532 6777777776
Q ss_pred hhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 76 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 76 NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 53221 2566665432222222 2356677766655
No 312
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=61.39 E-value=69 Score=29.45 Aligned_cols=102 Identities=8% Similarity=-0.019 Sum_probs=56.9
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH---h-cCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA---E-FNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~---~-~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+ . .+.++..+..|-. |.+.+++.+
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~ 89 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA----RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA-----EPDAPAELA 89 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----STTHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHH
Confidence 334577777666555667778888887 78776554333333222 2 4667777766533 455665555
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 90 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 127 (266)
T 4egf_A 90 RRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIA 127 (266)
T ss_dssp HHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 543221 3567766543222222 2456677776655
No 313
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=61.28 E-value=56 Score=30.31 Aligned_cols=102 Identities=12% Similarity=0.019 Sum_probs=58.7
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC-------------Chh---HHHHHHhcCCEEEEEecCCCCC
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ-------------YPL---YSASLAEFNMEQIGYYLDESKQ 138 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~-------------y~~---~~~~~~~~g~~~~~v~~~~~~~ 138 (509)
....+++|.|+...=..+.+.|.+.|. .|++.+-. -.. ....++..|.++..+..|-.
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-- 87 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGA----DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR-- 87 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC--
Confidence 344677777776666677788888887 77775321 111 12233445777777766533
Q ss_pred CCCCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 139 WGLPISELERSITEARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 139 ~~~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
|.+.+++.++...+. .++.++|-+.-....+. .++.+++++..+
T Consensus 88 ---~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 88 ---DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp ---CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 677887777654322 35666664422222222 356677776655
No 314
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=61.19 E-value=84 Score=29.81 Aligned_cols=101 Identities=15% Similarity=0.050 Sum_probs=58.0
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC------------ChhH---HHHHHhcCCEEEEEecCCCCCCC
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ------------YPLY---SASLAEFNMEQIGYYLDESKQWG 140 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~------------y~~~---~~~~~~~g~~~~~v~~~~~~~~~ 140 (509)
...+++|.|+...=..+.+.|.+.|. .|++.+-+ -... ...+...|.++..+..|-.
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~----~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---- 117 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGA----DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVR---- 117 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC----EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT----
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC----eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC----
Confidence 34577777766655667778888887 77765322 1111 2233445777777776633
Q ss_pred CCHHHHHHHHHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 141 LPISELERSITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 141 ~d~~~L~~~i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
|.+.+++.++...+. .++.++|-+.-....+ ..++.++++++.+
T Consensus 118 -d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 118 -DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp -CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 677777777654322 3566665442222222 2456777777665
No 315
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=60.34 E-value=49 Score=29.63 Aligned_cols=99 Identities=12% Similarity=0.066 Sum_probs=57.6
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH----HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL----AEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-....... +..|.++..+..|-. |.+.+++.++..
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~ 74 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGY----ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS-----KAESVEEFSKKV 74 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHCC-H
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccC-----CHHHHHHHHHHH
Confidence 477777776655667778888887 7877665544333322 244677777766633 677777766543
Q ss_pred hcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-..+.+. ..+.+++++..+
T Consensus 75 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 75 LERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp HHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHhcCCCCEEEECCccccccCcccCCHHHHHHHHH
Confidence 221 35676664433222222 346677777665
No 316
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=60.25 E-value=79 Score=28.72 Aligned_cols=99 Identities=16% Similarity=0.105 Sum_probs=55.1
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++...
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~ 74 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGF----AVAIADYNDATAKAVASEINQAGGHAVAVKVDVS-----DRDQVFAAVEQAR 74 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHH
Confidence 467777666555667777887776 777764432222222 2333656666665532 6777777776533
Q ss_pred cc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 75 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 75 KTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp HHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 22 2566665443222222 1346677766655
No 317
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=60.25 E-value=56 Score=34.30 Aligned_cols=106 Identities=14% Similarity=0.239 Sum_probs=63.8
Q ss_pred cEEEeCCHHHHHHHHHHHhhcC---CCCCC------CeEEEcCCCCh-------------h------HHHHHHhcCCEEE
Q psy13922 78 DVILSAGASDGIKSVLKLLIED---VDGKK------PGVLIPIPQYP-------------L------YSASLAEFNMEQI 129 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~---gd~~~------~~Vlv~~p~y~-------------~------~~~~~~~~g~~~~ 129 (509)
.|.+++++..++...+++|.+- .+... ...|...|.|. + +.+.+...+.++.
T Consensus 142 ~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~~p~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~mA~~KlN~l 221 (572)
T 3ozo_A 142 NATITANSFFGMRHGLETLSQLFVFDDIRDHLLMVRDVNISDKPVYPYRGILLDTARNYYSIESIKRTIEAMAAVKLNTF 221 (572)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEEEETTTTEEEEESSEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhccccccccccCceeEEecCCCccccceeccCCCCCCHHHHHHHHHHHHHcCCceE
Confidence 3667776666666666666441 10000 12344456543 1 2344455677788
Q ss_pred EEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 130 GYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 130 ~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
.+.+.++.+|.+......++-+.. . ...|..|+++++++|++.|++++|-||--
T Consensus 222 H~HltDdqgwrlei~~~P~Lt~~G-----a---------~~~~~~YT~~di~eiv~yA~~rgI~VIPE 275 (572)
T 3ozo_A 222 HWHITDSQSFPFVTTKRPNLYKFG-----A---------LSPQKVYTKAAIREVVRFGLERGVRVLPE 275 (572)
T ss_dssp EEECCCSSCCCBCCSSSHHHHHHH-----S---------SSSSSCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeecCcCceeccccCcchhccC-----C---------cCCCCCcCHHHHHHHHHHHHHhCCceeee
Confidence 887776666766655444332221 0 11356899999999999999999998853
No 318
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=60.24 E-value=94 Score=28.42 Aligned_cols=101 Identities=14% Similarity=0.053 Sum_probs=55.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH---hc--CCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA---EF--NMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~---~~--g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+ .. +.++..+..|-. |.+.+++.+
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~ 83 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGA----KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS-----DEAQVEAYV 83 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTT-----SHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCC-----CHHHHHHHH
Confidence 34577777776655677778888877 77776443232222222 22 556666665532 677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCC-C--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPT-G--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPt-G--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-..+. + ...+.+++++..+
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (267)
T 1iy8_A 84 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVS 122 (267)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 653222 246665543221111 2 1346677776655
No 319
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=60.00 E-value=59 Score=30.26 Aligned_cols=79 Identities=9% Similarity=0.072 Sum_probs=52.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-..........+.++..+..|-. |.+.+++.++....
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 75 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEGA----RVAVLDKSAERLRELEVAHGGNAVGVVGDVR-----SLQDQKRAAERCLA 75 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHTBTTEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC----EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 34678887777666677788888887 8888766555555555666767777766533 67777777765432
Q ss_pred c-CCceEEE
Q psy13922 156 H-CNPRAIV 163 (509)
Q Consensus 156 ~-~~~~~iv 163 (509)
. .++.++|
T Consensus 76 ~~g~iD~lv 84 (281)
T 3zv4_A 76 AFGKIDTLI 84 (281)
T ss_dssp HHSCCCEEE
T ss_pred hcCCCCEEE
Confidence 2 3566655
No 320
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=59.38 E-value=87 Score=28.53 Aligned_cols=101 Identities=11% Similarity=-0.007 Sum_probs=54.5
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+....++..+..|- -|.+.+++.++...+
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGA----TVAIADLDVMAAQAVVAGLENGGFAVEVDV-----TKRASVDAAMQKAID 82 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHTCTTCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHhcCCeEEEEeC-----CCHHHHHHHHHHHHH
Confidence 34677887776655677777888777 777765433333333333322334444442 267777777764322
Q ss_pred c-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 156 H-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 156 ~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 83 ALGGFDLLCANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 1 2566655432222222 2356677776655
No 321
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=59.25 E-value=74 Score=29.07 Aligned_cols=101 Identities=11% Similarity=0.015 Sum_probs=56.1
Q ss_pred CCcEEEeCCH-HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh---c-CCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 76 WQDVILSAGA-SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE---F-NMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 76 ~~~i~~t~G~-~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~---~-g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
...+++|.|+ +..=..+.+.|.+.|. .|++..-.-.......+. . +.++..+..|-. |.+.+++.+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~ 92 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGA----DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT-----STEAVDALI 92 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTT-----CHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCC----EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCC-----CHHHHHHHH
Confidence 3457777764 4344456667777776 787765444333333322 2 356666666533 677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-..+.+. ..+.+++++..+
T Consensus 93 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3o38_A 93 TQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLN 130 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 654322 35676664432222222 356677776665
No 322
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=58.80 E-value=80 Score=28.72 Aligned_cols=99 Identities=13% Similarity=0.077 Sum_probs=54.3
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh--HHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL--YSA---SLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~--~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-.. ... .++..+.++..+..|-. |.+.+++.++.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~ 74 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGF----DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT-----DKANFDSAIDE 74 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTC----EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHH
Confidence 467777666555667777777776 77765433222 222 22333666666666532 67777777764
Q ss_pred hhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-..+.+. ..+.+++++..+
T Consensus 75 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (258)
T 3a28_C 75 AAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYS 110 (258)
T ss_dssp HHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3222 25666654322222221 346677776655
No 323
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=58.64 E-value=95 Score=28.66 Aligned_cols=100 Identities=15% Similarity=0.088 Sum_probs=55.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++..
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~ 93 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGL----RVFVCARGEEGLRTTLKELREAGVEADGRTCDVR-----SVPEIEALVAAV 93 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHH
Confidence 4577777766555667777877776 777654332222222 2333666666665532 677777777653
Q ss_pred hcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 94 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 94 VERYGPVDVLVNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 222 2466665432222222 1356666666655
No 324
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=57.94 E-value=97 Score=28.97 Aligned_cols=103 Identities=15% Similarity=0.055 Sum_probs=60.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCh-----hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYP-----LYSASLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~-----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-. .....++..|.++..+..|-. |.+.+++.
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~ 118 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA----DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLS-----DESFARSL 118 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTT-----SHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCC-----CHHHHHHH
Confidence 334678887776666677788888887 7777543311 122334456777777666533 67777777
Q ss_pred HHhhhcc-CCceEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q psy13922 150 ITEARKH-CNPRAIVIINPG-NPTG--QVLTKENIQDIIKF 186 (509)
Q Consensus 150 i~~~~~~-~~~~~ivi~~p~-NPtG--~~~s~~~l~~l~~i 186 (509)
++...+. .++.++|-+.-. .+.+ ..++.+++++..++
T Consensus 119 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 119 VHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 7653322 356666544222 1222 24577777776653
No 325
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=57.75 E-value=1e+02 Score=28.60 Aligned_cols=101 Identities=11% Similarity=-0.077 Sum_probs=60.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH---HhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---AEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-....... ...|.++..+..|-. |.+.+++.++.
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~ 98 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGV----TVGALGRTRTEVEEVADEIVGAGGQAIALEADVS-----DELQMRNAVRD 98 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHH
Confidence 34577787776666677778888887 8877665444333333 334667777776633 67787777765
Q ss_pred hhcc-CCceEEEEeCCCC-CCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGN-PTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~N-PtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-.. +.+ ..++.+++++..+
T Consensus 99 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 99 LVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred HHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 4322 3566665442221 112 2456677777665
No 326
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=57.74 E-value=1e+02 Score=28.57 Aligned_cols=100 Identities=14% Similarity=0.131 Sum_probs=55.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc----CCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF----NMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+.. +.++..+..|- -|.+.+++.++.
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~ 97 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGA----QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTVSE 97 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHHHH
Confidence 4578887776655677777887776 7777654433332222221 55666666553 267888777765
Q ss_pred hhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 98 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 98 LIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 4322 3566666432222222 1345566666554
No 327
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=57.58 E-value=88 Score=29.70 Aligned_cols=84 Identities=15% Similarity=0.192 Sum_probs=50.2
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEE
Q psy13922 83 AGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAI 162 (509)
Q Consensus 83 ~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~i 162 (509)
++..+++..+-.+-....| .|++..|.|. .++.+.+.+.++...+.....++
T Consensus 83 ~~t~~ai~la~~a~~~Gad----avlv~~P~y~------------------------~~~~~~l~~~f~~va~a~~lPii 134 (300)
T 3eb2_A 83 TSVADAVAQAKLYEKLGAD----GILAILEAYF------------------------PLKDAQIESYFRAIADAVEIPVV 134 (300)
T ss_dssp SSHHHHHHHHHHHHHHTCS----EEEEEECCSS------------------------CCCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHHHcCCC----EEEEcCCCCC------------------------CCCHHHHHHHHHHHHHHCCCCEE
Confidence 4566777655544433345 8888888875 22445555555443332245566
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 163 VIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 163 vi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
+-++|. .||..++.+.+.+|+ +-.|+.=|=|.
T Consensus 135 lYn~P~-~tg~~l~~~~~~~La---~~pnIvgiKds 166 (300)
T 3eb2_A 135 IYTNPQ-FQRSDLTLDVIARLA---EHPRIRYIKDA 166 (300)
T ss_dssp EEECTT-TCSSCCCHHHHHHHH---TSTTEEEEEEC
T ss_pred EEECcc-ccCCCCCHHHHHHHH---cCCCEEEEEcC
Confidence 667776 379999977777764 34566666664
No 328
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=57.08 E-value=81 Score=28.31 Aligned_cols=99 Identities=8% Similarity=0.023 Sum_probs=52.7
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh----cCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE----FNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-.......+. .+.++..+..|- -|.+.+++.++..
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~ 74 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGD----RVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIAAT 74 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHH
Confidence 467777665555566777777776 777765443333332222 244555565553 2677777777653
Q ss_pred hcc-CCceEEEEeCCCCCCC-----CCCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTG-----QVLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG-----~~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+....+.+ ...+.+++++..+
T Consensus 75 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 2cfc_A 75 MEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA 112 (250)
T ss_dssp HHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence 221 2566666442221111 1245566665554
No 329
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=57.06 E-value=1.1e+02 Score=29.17 Aligned_cols=92 Identities=14% Similarity=0.123 Sum_probs=50.5
Q ss_pred EEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..| ..+++..+-.+-....| .|++..|.|... +.++-+.+.+.++...+
T Consensus 80 viaGvg~~~t~~ai~la~~A~~~Gad----avlv~~Pyy~~~---------------------~~~s~~~l~~~f~~va~ 134 (309)
T 3fkr_A 80 VIVTTSHYSTQVCAARSLRAQQLGAA----MVMAMPPYHGAT---------------------FRVPEAQIFEFYARVSD 134 (309)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCS----EEEECCSCBTTT---------------------BCCCHHHHHHHHHHHHH
T ss_pred EEEecCCchHHHHHHHHHHHHHcCCC----EEEEcCCCCccC---------------------CCCCHHHHHHHHHHHHH
Confidence 665433 45555444333332334 777777766210 13345566555554333
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH-CCcEEEEcccC
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR-EKLFLFADEVY 200 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~-~~i~lI~Deay 200 (509)
.....+++-+.|. ||..++.+.+.+|+ ++ .|+.=|=|++-
T Consensus 135 a~~lPiilYn~P~--tg~~l~~~~~~~La---~~~pnIvgiK~~~~ 175 (309)
T 3fkr_A 135 AIAIPIMVQDAPA--SGTALSAPFLARMA---REIEQVAYFXIETP 175 (309)
T ss_dssp HCSSCEEEEECGG--GCCCCCHHHHHHHH---HHSTTEEEEEECSS
T ss_pred hcCCCEEEEeCCC--CCCCCCHHHHHHHH---hhCCCEEEEECCCc
Confidence 2245566667784 89999976666554 33 46666664443
No 330
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=56.91 E-value=74 Score=30.33 Aligned_cols=90 Identities=21% Similarity=0.231 Sum_probs=50.5
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-.+-....| .|++..|.|. .++.+.+.+.++...+
T Consensus 84 ViaGvg~~st~~ai~la~~A~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~va~ 135 (306)
T 1o5k_A 84 VIVGAGTNSTEKTLKLVKQAEKLGAN----GVLVVTPYYN------------------------KPTQEGLYQHYKYISE 135 (306)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHHT
T ss_pred EEEcCCCccHHHHHHHHHHHHhcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 6665444 5555544433332334 7777777764 2345666665555433
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
.....+++-++|. .||..++.+.+.+|++ +-.|+.=|=|..
T Consensus 136 a~~lPiilYn~P~-~tg~~l~~~~~~~La~--~~pnIvgiKdss 176 (306)
T 1o5k_A 136 RTDLGIVVYNVPG-RTGVNVLPETAARIAA--DLKNVVGIXEAN 176 (306)
T ss_dssp TCSSCEEEEECHH-HHSCCCCHHHHHHHHH--HCTTEEEEEECC
T ss_pred hCCCCEEEEeCcc-ccCcCCCHHHHHHHHH--hCCCEEEEeCCC
Confidence 3244555556665 4788888777777652 234666565543
No 331
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=56.78 E-value=87 Score=28.91 Aligned_cols=102 Identities=12% Similarity=0.035 Sum_probs=57.9
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.... ..++..|.++..+..|- -|.+.+++.++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~ 97 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGA----MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-----NDATAVDALVE 97 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-----CCHHHHHHHHH
Confidence 334577776666555667777888887 7877655433332 22334466666665553 26777777776
Q ss_pred hhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 98 STLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 53322 3566655432222222 2456777777665
No 332
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=56.19 E-value=1.1e+02 Score=27.60 Aligned_cols=100 Identities=7% Similarity=0.068 Sum_probs=54.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC-CChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP-QYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p-~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..- .-..... .++..+.++..+..|-. |.+.+++.++.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 75 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGA----NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVA-----NAEDVTNMVKQ 75 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHH
Confidence 3577776666555666777777776 7776543 2222222 22334666666666532 67777777765
Q ss_pred hhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-..+.+. ..+.+++++..+
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 76 TVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3222 35666664322222221 356667766655
No 333
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=56.00 E-value=1.2e+02 Score=27.59 Aligned_cols=101 Identities=7% Similarity=0.010 Sum_probs=56.6
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 77 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGT----AIALLDMNREALEKAEASVREKGVEARSYVCDVT-----SEEAVIGTVDS 77 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHH
Confidence 34677887776666677777888876 777654332222222 2334666666666532 67777777765
Q ss_pred hhcc-CCceEEEEeCCCC-CCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGN-PTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~N-PtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-.. +.+ ...+.+++++..+
T Consensus 78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 78 VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHH
Confidence 3222 2566665432222 222 2346677776655
No 334
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=55.94 E-value=72 Score=30.34 Aligned_cols=89 Identities=16% Similarity=0.197 Sum_probs=50.8
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-.+-....| .|++..|.|. .++.+.+.+.++...+
T Consensus 84 ViaGvg~~~t~~ai~la~~A~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~va~ 135 (301)
T 1xky_A 84 VIAGTGSNNTHASIDLTKKATEVGVD----AVMLVAPYYN------------------------KPSQEGMYQHFKAIAE 135 (301)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHTTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHhcCCC----EEEEcCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 6665544 5555544443332334 7888888774 2244555555554333
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
.....+++-++|. .||..++.+.+.+|++ -.|+.=|=|..
T Consensus 136 a~~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiKdss 175 (301)
T 1xky_A 136 STPLPVMLYNVPG-RSIVQISVDTVVRLSE---IENIVAIKDAG 175 (301)
T ss_dssp TCSSCEEEEECHH-HHSSCCCHHHHHHHHT---STTEEEEEECS
T ss_pred hcCCCEEEEeCcc-ccCCCCCHHHHHHHHc---CCCEEEEEcCC
Confidence 2244555556665 4788899777777753 35666666543
No 335
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=55.82 E-value=1.2e+02 Score=27.38 Aligned_cols=100 Identities=10% Similarity=0.084 Sum_probs=58.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC-hh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY-PL---YSASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y-~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.- .. ....++..|.++..+..|-. |.+.+++.++.
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~ 75 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGY----NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA-----DADEVKAMIKE 75 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHH
Confidence 3577777776656667778888887 776643322 22 22334455777777776533 67888777765
Q ss_pred hhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 76 VVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4322 3566666442222222 2456777777665
No 336
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=55.74 E-value=1.1e+02 Score=27.40 Aligned_cols=102 Identities=7% Similarity=-0.038 Sum_probs=55.1
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEE-EEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQ-IGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~-~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++ ..+..|- -|.+.+++.++..
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~ 80 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGA----RLILIDREAAALDRAAQELGAAVAARIVADV-----TDAEAMTAAAAEA 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHGGGEEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhcccceeEEEEec-----CCHHHHHHHHHHH
Confidence 344678887766555677777887776 77776544333333334334444 4444442 2677777776542
Q ss_pred hccCCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 154 RKHCNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.+..++.++|-+....+.+ ...+.+++++..+
T Consensus 81 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (254)
T 2wsb_A 81 EAVAPVSILVNSAGIARLHDALETDDATWRQVMA 114 (254)
T ss_dssp HHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHH
T ss_pred HhhCCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 2112566665442222222 2345566666554
No 337
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=55.70 E-value=1.1e+02 Score=27.29 Aligned_cols=102 Identities=11% Similarity=0.027 Sum_probs=54.9
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-..... .++..+.++..+..|- -|.+.+++.++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 80 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGA----SVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALAD 80 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHH
Confidence 334577776665555667777887776 77766543222222 2233455666665552 26777877776
Q ss_pred hhhcc-CCceEEEEeCCC-CCCCCCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPG-NPTGQVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~-NPtG~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+... .+.....+.+++++..+
T Consensus 81 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~ 116 (255)
T 1fmc_A 81 FAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYE 116 (255)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 43221 256776644222 12112345666665554
No 338
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=55.68 E-value=92 Score=28.47 Aligned_cols=102 Identities=13% Similarity=0.112 Sum_probs=58.5
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH---HhcC-CEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---AEFN-MEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---~~~g-~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-....... +..+ .++..+..|-. |.+.+++.+
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~ 79 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGA----NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVS-----DRAQCDALA 79 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTT-----SHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCC-----CHHHHHHHH
Confidence 344677777776656667777888887 8877655443333332 2333 46666665533 677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 80 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 80 GRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 653322 3567666442222222 2456677777665
No 339
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=55.64 E-value=70 Score=29.01 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=55.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC-CCCh---hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI-PQYP---LYSASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~-p~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++.. ..-. .....++..+.++..+..|- -|.+.+++.++.
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 84 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGF----RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV-----GDWDSTKQAFDK 84 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTE----EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCC-----CCHHHHHHHHHH
Confidence 3567776665555666777888776 676632 2222 23334445566666666553 367777777765
Q ss_pred hhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 4332 3456655432222222 2456677766655
No 340
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=55.61 E-value=62 Score=30.56 Aligned_cols=88 Identities=17% Similarity=0.189 Sum_probs=47.8
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-.+-....| .|++..|.|. .++-+.+.+.++...+
T Consensus 72 viaGvg~~~t~~ai~la~~a~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~ia~ 123 (289)
T 2yxg_A 72 VIAGAGSNCTEEAIELSVFAEDVGAD----AVLSITPYYN------------------------KPTQEGLRKHFGKVAE 123 (289)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHHTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 5555443 5555444433322334 7777777764 2244555555544332
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
.....+++-++|.. ||..++.+.+.+|++ +-.|+.=|=|
T Consensus 124 a~~lPiilYn~P~~-tg~~l~~~~~~~La~--~~pnivgiK~ 162 (289)
T 2yxg_A 124 SINLPIVLYNVPSR-TAVNLEPKTVKLLAE--EYSNISAVKE 162 (289)
T ss_dssp HCSSCEEEEECHHH-HSCCCCHHHHHHHHH--HCTTEEEEEE
T ss_pred hcCCCEEEEeCccc-cCcCCCHHHHHHHHH--hCCCEEEEEe
Confidence 22455666566664 788888777777652 2245554555
No 341
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=54.90 E-value=1.3e+02 Score=27.72 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=55.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-..... .++..+.++..+..|-. |.+.+++.++..
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~ 115 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVS----HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVS-----KKEEISEVINKI 115 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSS----EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCC----EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCC-----CHHHHHHHHHHH
Confidence 3577777666555667777777776 77764322222222 23334666666666533 678888877653
Q ss_pred hcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 116 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 2c07_A 116 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLR 150 (285)
T ss_dssp HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 222 2566666442222222 2345666666554
No 342
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=54.77 E-value=1.1e+02 Score=27.99 Aligned_cols=83 Identities=5% Similarity=-0.073 Sum_probs=48.4
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
+....+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|- -|.+.+++.+
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~ 99 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKS----KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC-----SNREDIYSSA 99 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC----EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeC-----CCHHHHHHHH
Confidence 3444678877766555677777877776 777765433322222 233465666666553 2677777777
Q ss_pred Hhhhcc-CCceEEEEe
Q psy13922 151 TEARKH-CNPRAIVII 165 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~ 165 (509)
+...+. .++.++|-+
T Consensus 100 ~~~~~~~g~iD~li~~ 115 (272)
T 1yb1_A 100 KKVKAEIGDVSILVNN 115 (272)
T ss_dssp HHHHHHTCCCSEEEEC
T ss_pred HHHHHHCCCCcEEEEC
Confidence 653222 256666544
No 343
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=54.68 E-value=57 Score=30.90 Aligned_cols=87 Identities=23% Similarity=0.241 Sum_probs=48.0
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-.+-....| .|++..|.|. .++.+.+.+.++...+
T Consensus 72 viaGvg~~~t~~ai~la~~A~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~ia~ 123 (292)
T 2vc6_A 72 VIAGAGSNSTAEAIAFVRHAQNAGAD----GVLIVSPYYN------------------------KPTQEGIYQHFKAIDA 123 (292)
T ss_dssp BEEECCCSSHHHHHHHHHHHHHTTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHHH
T ss_pred EEEecCCccHHHHHHHHHHHHHcCCC----EEEEcCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 6655443 5555544444333334 7888888774 2244555554444322
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHH-HCCcEEEEc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAH-REKLFLFAD 197 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~-~~~i~lI~D 197 (509)
.....+++-++|. .||..++.+.+.+|+ + -.|+.=|=|
T Consensus 124 a~~lPiilYn~P~-~tg~~l~~~~~~~La---~~~pnIvgiK~ 162 (292)
T 2vc6_A 124 ASTIPIIVYNIPG-RSAIEIHVETLARIF---EDCPNVKGVXD 162 (292)
T ss_dssp HCSSCEEEEECHH-HHSCCCCHHHHHHHH---HHCTTEEEEEE
T ss_pred hCCCCEEEEeCcc-ccCcCCCHHHHHHHH---hhCCCEEEEec
Confidence 2234555556555 478888877766665 3 246665555
No 344
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=54.37 E-value=1.2e+02 Score=28.08 Aligned_cols=101 Identities=11% Similarity=-0.024 Sum_probs=58.4
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH---hcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA---EFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+ ..|.++..+..|-. |.+.+++.++.
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~ 78 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGA----KVVVTARNGNALAELTDEIAGGGGEAAALAGDVG-----DEALHEALVEL 78 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC----EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTT-----CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHH
Confidence 34577777666555667778888887 88887655443333333 33666776665532 67777777765
Q ss_pred hhcc-CCceEEEEeCC-CCCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINP-GNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p-~NPtG~--~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.- ..+.+. ..+.+++++..+
T Consensus 79 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 79 AVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp HHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 3322 35666554322 112222 456677777665
No 345
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=54.21 E-value=1.2e+02 Score=27.09 Aligned_cols=100 Identities=9% Similarity=0.002 Sum_probs=52.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcC--CEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFN--MEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g--~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+... .++..+..|- -|.+.+++.++...
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 77 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGA----KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS-----SDEDGWTKLFDATE 77 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhhccCceEEEECCC-----CCHHHHHHHHHHHH
Confidence 4577776666555667777877776 77776543222333333222 2344444442 26777777776532
Q ss_pred cc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+....+.+ ...+.+++++..+
T Consensus 78 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (251)
T 1zk4_A 78 KAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLA 111 (251)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 21 2466666443222222 2356666666554
No 346
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=54.09 E-value=1.2e+02 Score=27.02 Aligned_cols=102 Identities=9% Similarity=0.044 Sum_probs=54.4
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH---h-cCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA---E-FNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~---~-~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-........ . .+.++..+..|- -|.+.+++.+
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 76 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGS----TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAF 76 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHH
Confidence 334577776666555666777777776 77776543222222221 1 355666666553 2678887777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+....+.+ ...+.+++++..+
T Consensus 77 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 77 EEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 653222 2566666432222222 1345556655544
No 347
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=53.76 E-value=77 Score=28.90 Aligned_cols=102 Identities=8% Similarity=0.006 Sum_probs=55.8
Q ss_pred CCCcEEEeCCH--HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhH-----HHHHHhcCCEEEEEecCCCCCCCCCHHHHH
Q psy13922 75 DWQDVILSAGA--SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLY-----SASLAEFNMEQIGYYLDESKQWGLPISELE 147 (509)
Q Consensus 75 ~~~~i~~t~G~--~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~-----~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~ 147 (509)
....+++|.|+ ...=..+.+.|.+.|. .|++..-.-... ....+..+.++..+..|-. |.+.++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~----~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~ 89 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGA----AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVD-----SYESCE 89 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSC----EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTT-----CHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCC----eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCC-----CHHHHH
Confidence 34467777665 3444456667777776 777654332221 2222344777777766533 677887
Q ss_pred HHHHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 148 RSITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 148 ~~i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+.++...+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 90 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 3gdg_A 90 KLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQ 130 (267)
T ss_dssp HHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 777664332 3567666442222222 2346666766655
No 348
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=53.39 E-value=79 Score=29.15 Aligned_cols=100 Identities=12% Similarity=0.019 Sum_probs=57.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChhH---HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPLY---SASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++. ...-... ...++..|.++..+..|-. |.+.+++.++.
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~----~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~ 98 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGF----TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS-----DPAAVRRLFAT 98 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTC----EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHH
Confidence 4577777776666667778888887 77764 3222222 2334455777777776633 67777777765
Q ss_pred hhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 99 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIA 134 (267)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 4322 3566655432222222 2456666776655
No 349
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=53.05 E-value=51 Score=31.37 Aligned_cols=88 Identities=16% Similarity=0.141 Sum_probs=50.6
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-.+-....| .|++..|.|. .++-+.+.+.++...+
T Consensus 72 viaGvg~~~t~~ai~la~~A~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~va~ 123 (297)
T 2rfg_A 72 VIAGAGSNNPVEAVRYAQHAQQAGAD----AVLCVAGYYN------------------------RPSQEGLYQHFKMVHD 123 (297)
T ss_dssp BEEECCCSSHHHHHHHHHHHHHHTCS----EEEECCCTTT------------------------CCCHHHHHHHHHHHHH
T ss_pred EEEccCCCCHHHHHHHHHHHHhcCCC----EEEEcCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 6555443 5566544444333334 7888888774 2244555555544332
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.....+++-++|.. ||..++.+.+.+|++ -.|+.=|=|.
T Consensus 124 a~~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKds 162 (297)
T 2rfg_A 124 AIDIPIIVYNIPPR-AVVDIKPETMARLAA---LPRIVGVKDA 162 (297)
T ss_dssp HCSSCEEEEECHHH-HSCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred hcCCCEEEEeCccc-cCCCCCHHHHHHHHc---CCCEEEEEeC
Confidence 22455666576664 899999877777753 3466555553
No 350
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=52.99 E-value=79 Score=29.90 Aligned_cols=88 Identities=15% Similarity=0.218 Sum_probs=47.6
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-.+-....| .|++..|.|. .++.+.+.+.++...+
T Consensus 72 viaGvg~~~t~~ai~la~~A~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~va~ 123 (294)
T 2ehh_A 72 VIAGTGGNATHEAVHLTAHAKEVGAD----GALVVVPYYN------------------------KPTQRGLYEHFKTVAQ 123 (294)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHTTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 6555443 5555444433332334 7777777764 2244555555544332
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
.....+++-++|.. ||..++.+.+.+|++ +-.|+.=|=|
T Consensus 124 a~~lPiilYn~P~~-tg~~l~~~~~~~La~--~~pnivgiKd 162 (294)
T 2ehh_A 124 EVDIPIIIYNIPSR-TCVEISVDTMFKLAS--ECENIVASKE 162 (294)
T ss_dssp HCCSCEEEEECHHH-HSCCCCHHHHHHHHH--HCTTEEEEEE
T ss_pred hcCCCEEEEeCCcc-cCcCCCHHHHHHHHh--hCCCEEEEEe
Confidence 22445555566653 788888777777652 2245554554
No 351
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=52.95 E-value=69 Score=28.87 Aligned_cols=78 Identities=12% Similarity=0.002 Sum_probs=48.5
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....|++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|-. |.+.+++.+++.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~- 82 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGS----KVIISGSNEEKLKSLGNALKDNYTIEVCNLA-----NKEECSNLISKT- 82 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHCSSEEEEECCTT-----SHHHHHHHHHTC-
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC----EEEEEcCCHHHHHHHHHHhccCccEEEcCCC-----CHHHHHHHHHhc-
Confidence 444677777776655667778888887 8887765544455555555545555544432 678888877753
Q ss_pred ccCCceEEEE
Q psy13922 155 KHCNPRAIVI 164 (509)
Q Consensus 155 ~~~~~~~ivi 164 (509)
.++.++|-
T Consensus 83 --~~id~li~ 90 (249)
T 3f9i_A 83 --SNLDILVC 90 (249)
T ss_dssp --SCCSEEEE
T ss_pred --CCCCEEEE
Confidence 14566553
No 352
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=52.39 E-value=1.3e+02 Score=27.00 Aligned_cols=102 Identities=12% Similarity=0.059 Sum_probs=56.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.... ..++..+.++..+..|-. |.+.+++.++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~ 82 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGA----RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVT-----NTESVQNAVR 82 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHH
Confidence 344678887766655667777887776 7777654322222 223334656666665532 6777777776
Q ss_pred hhhcc-CCceEEEEeCCCCC-CC--CCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGNP-TG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~NP-tG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+....+ .+ ...+.+++++..+
T Consensus 83 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 120 (260)
T 3awd_A 83 SVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVD 120 (260)
T ss_dssp HHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 53221 25666664422111 22 2345566665544
No 353
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=52.35 E-value=1.4e+02 Score=27.51 Aligned_cols=104 Identities=14% Similarity=0.084 Sum_probs=59.8
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCC---EEEEEecCCCCCCCCCHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNM---EQIGYYLDESKQWGLPISELE 147 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~---~~~~v~~~~~~~~~~d~~~L~ 147 (509)
+....+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..+. ++..+..|-. |.+.++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~-----~~~~v~ 79 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA----SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT-----NEDETA 79 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTT-----SHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCC-----CHHHHH
Confidence 3344678887776666677788888887 787765443333332 333343 6666666532 677777
Q ss_pred HHHHhhhcc-CCceEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q psy13922 148 RSITEARKH-CNPRAIVIINPG-NPTG--QVLTKENIQDIIKF 186 (509)
Q Consensus 148 ~~i~~~~~~-~~~~~ivi~~p~-NPtG--~~~s~~~l~~l~~i 186 (509)
+.++...+. .++.++|-+.-. .+.+ ...+.+++++..++
T Consensus 80 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 122 (281)
T 3svt_A 80 RAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDL 122 (281)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 777654322 356665543221 2222 24566777776653
No 354
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=52.16 E-value=1.2e+02 Score=28.35 Aligned_cols=103 Identities=7% Similarity=-0.022 Sum_probs=56.2
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
+....+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|- -|.+.+++++
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~ 102 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGA----TIVFNDINQELVDRGMAAYKAAGINAHGYVCDV-----TDEDGIQAMV 102 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecC-----CCHHHHHHHH
Confidence 3344677777776555677777887776 777754332222222 233355555555542 2677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 103 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 140 (291)
T 3cxt_A 103 AQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVID 140 (291)
T ss_dssp HHHHHHTCCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHcCCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 653322 2466655432222222 1346677776654
No 355
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=50.92 E-value=48 Score=30.69 Aligned_cols=100 Identities=8% Similarity=-0.026 Sum_probs=59.0
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC-hhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY-PLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
++-..+++|.|++.-=..+.+.|.+.|. .|++.+-.- ......++..|.+...+..|-. |.+..++.++.
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga----~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~ 77 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA----EVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTD 77 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC----EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHh
Confidence 3334566676666666667778888887 777754321 3345666777888888776633 33344443333
Q ss_pred hhccCCceEEEEeCCCCCCC--CCCCHHHHHHHHHH
Q psy13922 153 ARKHCNPRAIVIINPGNPTG--QVLTKENIQDIIKF 186 (509)
Q Consensus 153 ~~~~~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~i 186 (509)
. +..++|=+.-.++.+ .-++.++|+++.++
T Consensus 78 g----~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 78 A----GFDILVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp T----CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred C----CCCEEEECCCCCCCCCcccccHHHHHHHHHH
Confidence 2 566554332222222 25688899988874
No 356
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=50.89 E-value=60 Score=30.73 Aligned_cols=87 Identities=21% Similarity=0.257 Sum_probs=47.8
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-. ..+.|- +.|++..|.|. .++-+.+.+.++...+
T Consensus 73 viaGvg~~~t~~ai~la~~-a~~~Ga---davlv~~P~y~------------------------~~s~~~l~~~f~~ia~ 124 (292)
T 2ojp_A 73 VIAGTGANATAEAISLTQR-FNDSGI---VGCLTVTPYYN------------------------RPSQEGLYQHFKAIAE 124 (292)
T ss_dssp EEEECCCSSHHHHHHHHHH-TTTSSC---SEEEEECCCSS------------------------CCCHHHHHHHHHHHHT
T ss_pred EEEecCCccHHHHHHHHHH-HHhcCC---CEEEECCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 6666554 445543332 333331 27888888774 2345666666655433
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
.....+++-++|. .||..++.+.+.+|++ -.|+.=|=|
T Consensus 125 a~~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnivgiK~ 162 (292)
T 2ojp_A 125 HTDLPQILYNVPS-RTGCDLLPETVGRLAK---VKNIIGIXE 162 (292)
T ss_dssp TCSSCEEEECCHH-HHSCCCCHHHHHHHHT---STTEEEC-C
T ss_pred hcCCCEEEEeCcc-hhccCCCHHHHHHHHc---CCCEEEEeC
Confidence 3234555545555 4789999777777753 345554444
No 357
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=50.33 E-value=59 Score=31.51 Aligned_cols=54 Identities=9% Similarity=0.013 Sum_probs=31.9
Q ss_pred CHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 142 PISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 142 d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
+-+.+.+.++...+.....+++-++|.. ||..++.+.+.+|++ -.|+.=|=|..
T Consensus 144 s~~~l~~~f~~VA~a~~lPiilYn~P~~-tg~~l~~e~~~~La~---~pnIvgiKdss 197 (332)
T 2r8w_A 144 TQEEAYHHFAAVAGATALPLAIYNNPTT-TRFTFSDELLVRLAY---IPNIRAIKMPL 197 (332)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEECCHHH-HCCCCCHHHHHHHHT---STTEEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccc-cCcCCCHHHHHHHHc---CCCEEEEEeCC
Confidence 4555555555433322445555555554 899999887777764 35666566643
No 358
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=50.01 E-value=1.5e+02 Score=26.82 Aligned_cols=100 Identities=11% Similarity=0.055 Sum_probs=55.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC-hhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY-PLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.- ......+...|.++..+..|- -|.+.+++.++...+
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 75 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGA----NIVLNGFGDPAPALAEIARHGVKAVHHPADL-----SDVAQIEALFALAER 75 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC----EEEEECSSCCHHHHHHHHTTSCCEEEECCCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCchHHHHHHHHhcCCceEEEeCCC-----CCHHHHHHHHHHHHH
Confidence 3577777766555667777887776 777654322 222233344466666666553 267777777764322
Q ss_pred c-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 156 H-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 156 ~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
. .++.++|-+.-..+.+ ...+.++++++.+
T Consensus 76 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 76 EFGGVDILVNNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2 2466666432222222 2346677766655
No 359
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=49.95 E-value=1.4e+02 Score=27.53 Aligned_cols=100 Identities=10% Similarity=0.019 Sum_probs=53.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH---HhcCC---EEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---AEFNM---EQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---~~~g~---~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-....... ...+. ++..+..|-. |.+.+++.+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~ 77 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGA----NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT-----TEDGQDQII 77 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTT-----SHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCC-----CHHHHHHHH
Confidence 4577777666555667777887777 7777654333232222 22243 5555655532 677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC------CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG------QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG------~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 78 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 119 (280)
T 1xkq_A 78 NSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119 (280)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 653221 2566666432211111 1345566666554
No 360
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=49.51 E-value=1.6e+02 Score=27.09 Aligned_cols=102 Identities=7% Similarity=-0.071 Sum_probs=57.3
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
+....+++|.|+...=..+.+.|.+.|. .|++..-. .... ..+...+.++..+..|-. |.+.+++..
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~ 98 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGA----HVLAWGRT-DGVKEVADEIADGGGSAEAVVADLA-----DLEGAANVA 98 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESS-THHHHHHHHHHTTTCEEEEEECCTT-----CHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHH
Confidence 3445678887776666677778888887 77776522 2222 223445777777776633 666666653
Q ss_pred HhhhccCCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKHCNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+..++.++|-+.-..+.+ ...+.+++++..+
T Consensus 99 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (273)
T 3uf0_A 99 EELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLT 135 (273)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 3221113566666442222212 1346677777665
No 361
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=49.20 E-value=1.4e+02 Score=27.85 Aligned_cols=100 Identities=13% Similarity=0.037 Sum_probs=54.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCC---EEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNM---EQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~---~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-...... +...|. ++..+..|-. |.+.+++.+
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~ 97 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGA----QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT-----EASGQDDII 97 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT-----SHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCC-----CHHHHHHHH
Confidence 4577777666555677777888877 777765433322222 222343 5555655532 677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC----CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG----QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG----~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~ 137 (297)
T 1xhl_A 98 NTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFK 137 (297)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHh
Confidence 653221 2566666442222222 1356667766655
No 362
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=48.04 E-value=1.5e+02 Score=27.21 Aligned_cols=101 Identities=8% Similarity=0.000 Sum_probs=54.8
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh---cCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE---FNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+. .| ++..+..|- -|.+.++++++
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~----~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv-----~d~~~v~~~~~ 97 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGA----RVFICARDAEACADTATRLSAYG-DCQAIPADL-----SSEAGARRLAQ 97 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC----EEEEECSCHHHHHHHHHHHTTSS-CEEECCCCT-----TSHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeC-----CCHHHHHHHHH
Confidence 334577777766655667777887777 787766443333333322 23 455555442 26777777776
Q ss_pred hhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (276)
T 2b4q_A 98 ALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQ 134 (276)
T ss_dssp HHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHH
T ss_pred HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 53322 2566666432222112 1345566666555
No 363
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=47.90 E-value=71 Score=31.11 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=51.8
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-.+-....| .|++..|.|.. .++-+.+.+.++...+
T Consensus 95 ViaGvg~~st~eai~la~~A~~~Gad----avlv~~P~y~~-----------------------~~s~~~l~~~f~~IA~ 147 (344)
T 2hmc_A 95 VIVGTGAVNTASAVAHAVHAQKVGAK----GLMVIPRVLSR-----------------------GSVIAAQKAHFKAILS 147 (344)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHHTCS----EEEECCCCSSS-----------------------TTCHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCC----EEEECCCccCC-----------------------CCCHHHHHHHHHHHHh
Confidence 6655443 5555444433332334 77777777641 0344556555555433
Q ss_pred -cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 156 -HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 156 -~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.....+++-++| .||..++.+.+.+|+ ++-.|+.=|=|.
T Consensus 148 aa~~lPiilYn~P--~tg~~l~~e~~~~L~--a~~pnIvGiKds 187 (344)
T 2hmc_A 148 AAPEIPAVIYNSP--YYGFATRADLFFALR--AEHKNLVGFKEF 187 (344)
T ss_dssp HSTTSCEEEEEBG--GGTBCCCHHHHHHHH--HHCTTEEEEEEC
T ss_pred hCCCCcEEEEecC--ccCCCcCHHHHHHHH--hcCCCEEEEEcC
Confidence 335567777888 799999988877772 233566666653
No 364
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=47.80 E-value=1.5e+02 Score=28.29 Aligned_cols=100 Identities=10% Similarity=0.062 Sum_probs=55.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC-----CChh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP-----QYPL---YSASLAEFNMEQIGYYLDESKQWGLPISELER 148 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p-----~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 148 (509)
..+++|.|+...=..+.+.|.+.|. .|++..- .-.. ....+...+.++..+..|- -|.+.+++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~----~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dv-----td~~~v~~ 76 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGH----RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDV-----QSQVSVDR 76 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC----EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeec-----CCHHHHHH
Confidence 3577777766666677788888887 8875321 1111 1222334566677776653 26777777
Q ss_pred HHHhhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 149 SITEARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 149 ~i~~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
.++...+. .++.++|-+.-..+.|. .++.++++++.+
T Consensus 77 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 77 AIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 77654322 35666553322222222 346677766555
No 365
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=47.62 E-value=1.3e+02 Score=27.77 Aligned_cols=80 Identities=13% Similarity=-0.006 Sum_probs=45.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC-hhHHHH---HH-hcCCEEEEEecCCCCCCCCC----HHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY-PLYSAS---LA-EFNMEQIGYYLDESKQWGLP----ISELE 147 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y-~~~~~~---~~-~~g~~~~~v~~~~~~~~~~d----~~~L~ 147 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.- ...... +. ..|.++..+..|-. | .+.++
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~----~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~~~~~v~ 94 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGY----RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLT-----NSNVLPASCE 94 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTC----EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-----CSTTHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC----eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecC-----CccCCHHHHH
Confidence 3577776666555667777877776 777654433 222222 22 34666666665532 5 67777
Q ss_pred HHHHhhhcc-CCceEEEEe
Q psy13922 148 RSITEARKH-CNPRAIVII 165 (509)
Q Consensus 148 ~~i~~~~~~-~~~~~ivi~ 165 (509)
+.++...+. .++.++|-+
T Consensus 95 ~~~~~~~~~~g~iD~lvnn 113 (288)
T 2x9g_A 95 EIINSCFRAFGRCDVLVNN 113 (288)
T ss_dssp HHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEC
Confidence 766643221 256666543
No 366
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=47.43 E-value=1.7e+02 Score=26.78 Aligned_cols=102 Identities=10% Similarity=-0.029 Sum_probs=57.4
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~ 90 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGA----RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLL-----SRTERDKLMQ 90 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHH
Confidence 344678887776666677777888877 777765432322222 2334666666666533 6777777776
Q ss_pred hhhcc--CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH--CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~--~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-..+.+ ...+.++++++.+
T Consensus 91 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (273)
T 1ae1_A 91 TVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMG 128 (273)
T ss_dssp HHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 53221 2566665432222222 2356677776655
No 367
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=47.32 E-value=79 Score=29.07 Aligned_cols=94 Identities=14% Similarity=0.011 Sum_probs=56.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|++.-=..+.+.|.+.|. .|++.+-.-... ....+.++..+..|- -|.+.+++.+++.
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga----~Vv~~~~~~~~~---~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~--- 76 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGA----EVVALGLDADGV---HAPRHPRIRREELDI-----TDSQRLQRLFEAL--- 76 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSTTST---TSCCCTTEEEEECCT-----TCHHHHHHHHHHC---
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHH---hhhhcCCeEEEEecC-----CCHHHHHHHHHhc---
Confidence 4567777776666677788888887 888765332211 122345566666553 3678888888764
Q ss_pred CCceEEEEeCC-CCCCCCCCCHHHHHHHHHH
Q psy13922 157 CNPRAIVIINP-GNPTGQVLTKENIQDIIKF 186 (509)
Q Consensus 157 ~~~~~ivi~~p-~NPtG~~~s~~~l~~l~~i 186 (509)
.+..++| +|- -+.....++.++|+++.++
T Consensus 77 g~iDiLV-NNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 77 PRLDVLV-NNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp SCCSEEE-ECCCCCCGGGGGSHHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCcccCCHHHHHHHHHH
Confidence 2455544 433 2223345677788877764
No 368
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=47.08 E-value=68 Score=30.54 Aligned_cols=90 Identities=14% Similarity=0.132 Sum_probs=49.0
Q ss_pred cEEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
-|++..|+ .+++..+-.+-....| .|++..|.|. .++.+.+.+.++...
T Consensus 82 pViaGvg~~~t~~ai~la~~A~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~va 133 (303)
T 2wkj_A 82 KLIAHVGCVSTAESQQLAASAKRYGFD----AVSAVTPFYY------------------------PFSFEEHCDHYRAII 133 (303)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHHHTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHH
T ss_pred cEEEecCCCCHHHHHHHHHHHHhCCCC----EEEecCCCCC------------------------CCCHHHHHHHHHHHH
Confidence 36665443 5555544433332334 7777778774 223455554444332
Q ss_pred ccCC-ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 155 KHCN-PRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 155 ~~~~-~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
+... ..+++-++|. .||..++.+.+.+|++ -.|+.=|=|..
T Consensus 134 ~a~~~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiK~s~ 175 (303)
T 2wkj_A 134 DSADGLPMVVYNIPA-LSGVKLTLDQINTLVT---LPGVGALXQTS 175 (303)
T ss_dssp HHHTTCCEEEEECHH-HHCCCCCHHHHHHHHT---STTEEEEEECC
T ss_pred HhCCCCCEEEEeCcc-ccCCCCCHHHHHHHhc---CCCEEEEeCCC
Confidence 2213 4555556665 5788888777777653 35666555533
No 369
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=47.02 E-value=1.1e+02 Score=28.04 Aligned_cols=79 Identities=8% Similarity=-0.027 Sum_probs=43.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh------cCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE------FNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~------~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+. .+.++..+..|- -|.+.+++.+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGA----KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV-----TTDAGQDEIL 77 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEeccc-----CCHHHHHHHH
Confidence 3567776665555666777877776 777765432222222222 234555555542 2677777777
Q ss_pred Hhhhcc-CCceEEEE
Q psy13922 151 TEARKH-CNPRAIVI 164 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi 164 (509)
+...+. .++.++|-
T Consensus 78 ~~~~~~~g~id~lv~ 92 (278)
T 1spx_A 78 STTLGKFGKLDILVN 92 (278)
T ss_dssp HHHHHHHSCCCEEEE
T ss_pred HHHHHHcCCCCEEEE
Confidence 643221 24666553
No 370
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=46.89 E-value=1.6e+02 Score=26.29 Aligned_cols=102 Identities=6% Similarity=0.038 Sum_probs=54.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcC-CEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFN-MEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g-~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..+ .++..+..+-+ .-|.+.+++.++.
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d---~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGA----SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLE---NATAQQYRELAAR 87 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTT---TCCHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC----EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccc---cCCHHHHHHHHHH
Confidence 4577777766655667778888887 787766544333332 22222 23333333321 2367777776665
Q ss_pred hhcc-CCceEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPG-NPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~-NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-. .+.+ ..++.+++++..+
T Consensus 88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 124 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMH 124 (247)
T ss_dssp HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 3322 356666644222 2222 2356677776655
No 371
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=46.69 E-value=1.7e+02 Score=26.51 Aligned_cols=102 Identities=12% Similarity=-0.037 Sum_probs=57.5
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~ 78 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGA----SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLS-----SRSERQELMN 78 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHH
Confidence 344678887776666677778888777 777764332222222 2334667776666533 6777777776
Q ss_pred hhhcc--CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH--CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~--~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-..+.+ ..++.+++++..+
T Consensus 79 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 79 TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp HHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 53221 2566665432222222 2356667766655
No 372
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=46.63 E-value=1.4e+02 Score=27.42 Aligned_cols=101 Identities=16% Similarity=0.199 Sum_probs=60.4
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEE-E--cCCC-----------ChhHHHHHHhcCCEEEEEecCCCCCCCCCH
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVL-I--PIPQ-----------YPLYSASLAEFNMEQIGYYLDESKQWGLPI 143 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vl-v--~~p~-----------y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 143 (509)
-++.-+||..+..++..+.. .|. .|. + ..|. .......++..|+++..+++.... .--.
T Consensus 7 vvvl~SGGkDSs~al~~l~~-~G~----eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~--~~e~ 79 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAIK-NRF----SVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEK--EKEV 79 (237)
T ss_dssp EEEECCSSHHHHHHHHHHHH-TTC----EEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CH
T ss_pred EEEEecCcHHHHHHHHHHHH-cCC----eEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCc--hHHH
Confidence 35666888888766665543 443 443 2 1111 122456677889988888775321 1125
Q ss_pred HHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 144 SELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 144 ~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
+.|.+++++. .+.+++ +|.+.+......+-+.|.+.|+..+.
T Consensus 80 e~l~~~l~~~----~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~~ 121 (237)
T 3rjz_A 80 EDLKRVLSGL----KIQGIV-------AGALASKYQRKRIEKVAKELGLEVYT 121 (237)
T ss_dssp HHHHHHHTTS----CCSEEE-------CC---CCSHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHhc----CCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEEc
Confidence 6677777653 455665 67788878889999999999988664
No 373
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=46.46 E-value=59 Score=30.77 Aligned_cols=88 Identities=19% Similarity=0.294 Sum_probs=48.1
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-.+-....| .|++..|.|. .++-+.+.+.++...+
T Consensus 73 vi~Gvg~~~t~~ai~la~~a~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~ia~ 124 (291)
T 3a5f_A 73 VIAGTGSNNTAASIAMSKWAESIGVD----GLLVITPYYN------------------------KTTQKGLVKHFKAVSD 124 (291)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCS----EEEEECCCSS------------------------CCCHHHHHHHC-CTGG
T ss_pred EEEeCCcccHHHHHHHHHHHHhcCCC----EEEEcCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 6665444 5555444433332334 7777777764 2244555555554333
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.....+++-++|.. ||..++.+.+.+|++ -.|+.=|=|.
T Consensus 125 a~~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnivgiK~s 163 (291)
T 3a5f_A 125 AVSTPIIIYNVPGR-TGLNITPGTLKELCE---DKNIVAVXEA 163 (291)
T ss_dssp GCCSCEEEEECHHH-HSCCCCHHHHHHHTT---STTEEEEEEC
T ss_pred hcCCCEEEEeCccc-cCCCCCHHHHHHHHc---CCCEEEEeCC
Confidence 22345555566653 788888777777653 3455555553
No 374
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=46.44 E-value=95 Score=28.13 Aligned_cols=98 Identities=12% Similarity=0.069 Sum_probs=54.4
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-C
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH-C 157 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~-~ 157 (509)
+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+.++..+..|- -|.+.+++.++...+. .
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 73 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGH----KVIATGRRQERLQELKDELGDNLYIAQLDV-----RNRAAIEEMLASLPAEWC 73 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHTSCTTTC
T ss_pred EEEECCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHHHHHHhCC
Confidence 56666655545566677777776 777765443333344444444555565553 3788888888764322 2
Q ss_pred CceEEEEeCCCC-CCC--CCCCHHHHHHHHH
Q psy13922 158 NPRAIVIINPGN-PTG--QVLTKENIQDIIK 185 (509)
Q Consensus 158 ~~~~ivi~~p~N-PtG--~~~s~~~l~~l~~ 185 (509)
++.++|-+.-.. +.+ ...+.+++++..+
T Consensus 74 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 104 (248)
T 3asu_A 74 NIDILVNNAGLALGMEPAHKASVEDWETMID 104 (248)
T ss_dssp CCCEEEECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCchhhCCHHHHHHHHH
Confidence 456655332111 112 2456677776655
No 375
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=46.29 E-value=1.7e+02 Score=26.47 Aligned_cols=101 Identities=15% Similarity=0.056 Sum_probs=54.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc-----CCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF-----NMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~-----g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+.. +.++..+..|- -|.+.+++.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 77 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNGA----RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI-----REPGDIDRLF 77 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccC-----CCHHHHHHHH
Confidence 34577777776655677777887776 7777654333222222221 33555555542 2678888777
Q ss_pred HhhhccCCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKHCNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+...+...+.++|-+....+.+ ...+.+++++..+
T Consensus 78 ~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (260)
T 2z1n_A 78 EKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYR 114 (260)
T ss_dssp HHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 7543331366655432222222 1345666666554
No 376
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=46.08 E-value=1.1e+02 Score=29.78 Aligned_cols=53 Identities=19% Similarity=0.229 Sum_probs=29.9
Q ss_pred CHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 142 PISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 142 d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
+.+.+.+.++...+.....+++-++|. .||..++.+.+.+|++ +-.|+.=|=|
T Consensus 141 s~~~l~~~f~~VA~a~~lPiilYn~P~-~tg~~l~~e~~~~La~--~~pnIvgiKd 193 (343)
T 2v9d_A 141 SEANLIRYFEQVADSVTLPVMLYNFPA-LTGQDLTPALVKTLAD--SRSNIIGIKD 193 (343)
T ss_dssp CHHHHHHHHHHHHHTCSSCEEEEECHH-HHSSCCCHHHHHHHHH--HCTTEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCch-hcCcCCCHHHHHHHHH--hCCCEEEEEe
Confidence 456666555544332244555556555 3688888777777652 2345555555
No 377
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=45.65 E-value=1.4e+02 Score=26.90 Aligned_cols=101 Identities=11% Similarity=-0.005 Sum_probs=56.1
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH- 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~- 156 (509)
.+++|.|+...=..+.+.|.+.|. +..|++..-.-.......+..+.++..+..|-. |.+.+++.++...+.
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~--~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 76 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDK--DTVVYGVARSEAPLKKLKEKYGDRFFYVVGDIT-----EDSVLKQLVNAAVKGH 76 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCS--SCEEEEEESCHHHHHHHHHHHGGGEEEEESCTT-----SHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHhcCC--CeEEEEecCCHHHHHHHHHHhCCceEEEECCCC-----CHHHHHHHHHHHHHhc
Confidence 356666655444555666665531 126666554444444555555667777766533 677777777654322
Q ss_pred CCceEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q psy13922 157 CNPRAIVIINPG-NPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 157 ~~~~~ivi~~p~-NPtG--~~~s~~~l~~l~~ 185 (509)
.++.++|-+.-. .+.+ ...+.+++++..+
T Consensus 77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 3kzv_A 77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYD 108 (254)
T ss_dssp SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHH
T ss_pred CCccEEEECCcccCCCCCcccCCHHHHHHHHH
Confidence 356766644222 2222 2457777777665
No 378
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=45.56 E-value=1.7e+02 Score=26.28 Aligned_cols=100 Identities=11% Similarity=0.060 Sum_probs=52.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHH----HHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSA----SLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-..... ..+..+.++..+..|- -|.+.+++.++.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~ 85 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGA----NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-----SNTDIVTKTIQQ 85 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTE----EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeC-----CCHHHHHHHHHH
Confidence 3577777766555667777877776 77665432122211 1222355666666553 267777777765
Q ss_pred hhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 1h5q_A 86 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYD 121 (265)
T ss_dssp HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHh
Confidence 3322 2455554332222222 1345666666554
No 379
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=45.18 E-value=1.8e+02 Score=26.47 Aligned_cols=99 Identities=10% Similarity=0.064 Sum_probs=53.8
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC-CCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI-PQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~-p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
.+++|.|+...=..+.+.|.+.|. .|++.. ..-.... ......+.++..+..|-. |.+.+++.++..
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~ 97 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGM----AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA-----DFESCERCAEKV 97 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTC----EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTT-----CHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC----EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHH
Confidence 466666665555566777888876 777654 2222222 222334566666665533 677777777654
Q ss_pred hcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-....+. ..+.+++++..+
T Consensus 98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 132 (269)
T 3gk3_A 98 LADFGKVDVLINNAGITRDATFMKMTKGDWDAVMR 132 (269)
T ss_dssp HHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHH
Confidence 322 35676664432222222 346667766554
No 380
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=45.04 E-value=29 Score=38.27 Aligned_cols=124 Identities=12% Similarity=0.241 Sum_probs=69.4
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhc---CCCCC--CCeEEEcCCCCh-------------------hHHHHHHhcCCEEE
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIE---DVDGK--KPGVLIPIPQYP-------------------LYSASLAEFNMEQI 129 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~---~gd~~--~~~Vlv~~p~y~-------------------~~~~~~~~~g~~~~ 129 (509)
++.+.|.+++.+..++...+++|.+ .++.. ....|...|.|. .+.+.+...+.++.
T Consensus 266 v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN~l 345 (858)
T 1c7s_A 266 IGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNKF 345 (858)
T ss_dssp ECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCcEE
Confidence 4566788887777766666666643 11100 002334456554 12344555678888
Q ss_pred EEecCCCCCCCCCHHHHHHHHHhhhcc-C---CceEEEEeCCCC--CCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 130 GYYLDESKQWGLPISELERSITEARKH-C---NPRAIVIINPGN--PTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 130 ~v~~~~~~~~~~d~~~L~~~i~~~~~~-~---~~~~ivi~~p~N--PtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
.+.+.++.+|.+....+.++-+..... . ...++.-..-++ +.|-.|+++++++|++.|++++|-||--
T Consensus 346 h~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VIPE 419 (858)
T 1c7s_A 346 HFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIPE 419 (858)
T ss_dssp EEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEEEE
T ss_pred EEEeccCccccccccCCchhhhccccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEEEc
Confidence 887766666776655544433211000 0 000010000011 3467899999999999999999998853
No 381
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=44.52 E-value=47 Score=30.35 Aligned_cols=97 Identities=13% Similarity=0.061 Sum_probs=54.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-. .....+..+.++..+..|-. |.+.+++.++...+.
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~---~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~ 77 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGA----QVVVLDIR---GEDVVADLGDRARFAAADVT-----DEAAVASALDLAETM 77 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTC----EEEEEESS---CHHHHHHTCTTEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCc---hHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHh
Confidence 4577777766555667777888877 77765432 23344555666776666533 677777766543222
Q ss_pred CCceEEEEeCCCCCCCC------CCCHHHHHHHHH
Q psy13922 157 CNPRAIVIINPGNPTGQ------VLTKENIQDIIK 185 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~------~~s~~~l~~l~~ 185 (509)
.++.++|-+.-....+. ..+.+++++..+
T Consensus 78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
T 3tl3_A 78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVD 112 (257)
T ss_dssp SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcccccccccCCHHHHHHHHH
Confidence 24565553311111110 156666766655
No 382
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=44.35 E-value=1.9e+02 Score=26.38 Aligned_cols=99 Identities=8% Similarity=-0.046 Sum_probs=56.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH---hc--CCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA---EF--NMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~---~~--g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+ .. +..+..+..|-. |.+.+++.
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-----~~~~~~~~ 79 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA----NVLINGRREENVNETIKEIRAQYPDAILQPVVADLG-----TEQGCQDV 79 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT-----SHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC-----CHHHHHHH
Confidence 344677777766555667777888887 88876544333333322 22 456666665533 67778777
Q ss_pred HHhhhccCCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 150 ITEARKHCNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 150 i~~~~~~~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+++. .++.++|-+.-....+ ...+.+++++..+
T Consensus 80 ~~~~---g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 80 IEKY---PKVDILINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp HHHC---CCCSEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHhc---CCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 7653 2466655432222112 2456677766655
No 383
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=44.26 E-value=65 Score=30.51 Aligned_cols=88 Identities=16% Similarity=0.125 Sum_probs=46.5
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-.+-....| .|++..|.|. .++.+.+.+.++...+
T Consensus 76 viaGvg~~~t~~ai~la~~a~~~Gad----avlv~~P~y~------------------------~~~~~~l~~~f~~va~ 127 (293)
T 1f6k_A 76 LIAQVGSVNLKEAVELGKYATELGYD----CLSAVTPFYY------------------------KFSFPEIKHYYDTIIA 127 (293)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 6655444 5555544433332334 7777777764 2234444444443222
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.....+++-++|. .||..++.+.+.+|++ -.|+.=|=|.
T Consensus 128 a~~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiK~s 166 (293)
T 1f6k_A 128 ETGSNMIVYSIPF-LTGVNMGIEQFGELYK---NPKVLGVKFT 166 (293)
T ss_dssp HHCCCEEEEECHH-HHCCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred hCCCCEEEEECcc-ccCcCCCHHHHHHHhc---CCCEEEEEEC
Confidence 1134455556555 3688888777776653 3455555553
No 384
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=44.22 E-value=1.2e+02 Score=28.81 Aligned_cols=88 Identities=14% Similarity=0.222 Sum_probs=46.3
Q ss_pred EEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..|+ .+++..+-.+-....| .|++..|.|. .++-+.+.+.++...+
T Consensus 88 viaGvg~~st~~ai~la~~A~~~Gad----avlv~~P~y~------------------------~~~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 88 LIAGVGTNNTRTSVELAEAAASAGAD----GLLVVTPYYS------------------------KPSQEGLLAHFGAIAA 139 (304)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHTTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHhcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 6665544 5556544443332334 7888888764 2234444444443322
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.....+++-++|.. ||..++.+.+.+|++ -.|+.=|=|.
T Consensus 140 a~~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKds 178 (304)
T 3cpr_A 140 ATEVPICLYDIPGR-SGIPIESDTMRRLSE---LPTILAVXDA 178 (304)
T ss_dssp HCCSCEEEEECHHH-HSSCCCHHHHHHHTT---STTEEEEEEC
T ss_pred hcCCCEEEEeCccc-cCcCCCHHHHHHHHc---CCCEEEEecC
Confidence 22344555455542 577788766666653 3455555553
No 385
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=44.20 E-value=2e+02 Score=26.79 Aligned_cols=78 Identities=13% Similarity=0.124 Sum_probs=48.0
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEec-CCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYL-DESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDII 184 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~ 184 (509)
.+++.-|. |...++.+|.+.+.+.. .++ -.+++..|.+.++...+. ++++|+...-.+| .-.+.|.
T Consensus 165 ~~vt~H~a---f~Y~~~~yGl~~~~~~~~~~~--~eps~~~l~~l~~~ik~~-~v~~if~e~~~~~-------~~~~~l~ 231 (282)
T 3mfq_A 165 YLVTPHDA---FNYFAASYDFTLYAPQGVSTD--SEVANSDMIETVNLIIDH-NIKAIFTESTTNP-------ERMKKLQ 231 (282)
T ss_dssp EEECSSSC---CHHHHHHTTCEEECSSCSSSC--SCCCHHHHHHHHHHHHHH-TCCEEECBTTSCT-------HHHHHHH
T ss_pred EEEEECch---HHHHHHHCCCeEecccccCCC--CCCCHHHHHHHHHHHHHc-CCCEEEEeCCCCh-------HHHHHHH
Confidence 45544444 55677889999876532 222 255666666655432211 7889886533333 5578888
Q ss_pred HHHHHCCcEEEE
Q psy13922 185 KFAHREKLFLFA 196 (509)
Q Consensus 185 ~ia~~~~i~lI~ 196 (509)
++|++.|+.+++
T Consensus 232 ~~a~~~g~~v~~ 243 (282)
T 3mfq_A 232 EAVKAKGGQVEV 243 (282)
T ss_dssp HHHHTTSCCCEE
T ss_pred HHHHhcCCceEE
Confidence 899999976654
No 386
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=43.90 E-value=2e+02 Score=26.59 Aligned_cols=101 Identities=14% Similarity=0.101 Sum_probs=55.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH---h-----cCCEEEEEecCCCCCCCCCHHHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA---E-----FNMEQIGYYLDESKQWGLPISELE 147 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~---~-----~g~~~~~v~~~~~~~~~~d~~~L~ 147 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+ . .+.++..+..|-. |.+.++
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~-----~~~~v~ 88 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGS----NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIR-----NEEEVN 88 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTT-----CHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCC-----CHHHHH
Confidence 34678887766555667777887776 77776543332222222 1 3556666665532 677777
Q ss_pred HHHHhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 148 RSITEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 148 ~~i~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+.++...+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 89 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 89 NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 777653221 2466666432222212 2345566666554
No 387
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=43.70 E-value=2.1e+02 Score=26.82 Aligned_cols=75 Identities=13% Similarity=0.076 Sum_probs=46.3
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDII 184 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~ 184 (509)
+.+++.-+. |...++.+|.+.+.+.... -.+++..|.+.++...+ .++++|+...-.+| .-.+.
T Consensus 191 ~~~v~~H~a---f~Yf~~~yGl~~~~~~~~~---~eps~~~l~~l~~~ik~-~~v~~If~e~~~~~-------~~~~~-- 254 (291)
T 1pq4_A 191 RKFIVFHPS---WAYFARDYNLVQIPIEVEG---QEPSAQELKQLIDTAKE-NNLTMVFGETQFST-------KSSEA-- 254 (291)
T ss_dssp CEEEESSCC---CHHHHHHTTCEEEESCBTT---BCCCHHHHHHHHHHHHT-TTCCEEEEETTSCC-------HHHHH--
T ss_pred CEEEEECCc---hHHHHHHCCCEEeecccCC---CCCCHHHHHHHHHHHHH-cCCCEEEEeCCCCh-------HHHHH--
Confidence 378887666 4556788999987764321 25677777766654322 27888887644443 22333
Q ss_pred HHHHHCCcEEEE
Q psy13922 185 KFAHREKLFLFA 196 (509)
Q Consensus 185 ~ia~~~~i~lI~ 196 (509)
++++.|+.++.
T Consensus 255 -ia~~~g~~v~~ 265 (291)
T 1pq4_A 255 -IAAEIGAGVEL 265 (291)
T ss_dssp -HHHHHTCEEEE
T ss_pred -HHHHcCCeEEE
Confidence 46677877654
No 388
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=43.64 E-value=1.8e+02 Score=26.13 Aligned_cols=103 Identities=5% Similarity=-0.094 Sum_probs=55.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh---c-CCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE---F-NMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~---~-g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+. . +.++..+..+-. .-|.+.+++.++
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~ 84 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGA----TVILLGRNEEKLRQVASHINEETGRQPQWFILDLL---TCTSENCQQLAQ 84 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTT---TCCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecc---cCCHHHHHHHHH
Confidence 34677777776655667777888887 888766543333333222 1 223444444321 136677777766
Q ss_pred hhhcc-CCceEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPG-NPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~-NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-. .+.+ ...+.+++++..+
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQ 122 (252)
T ss_dssp HHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHH
T ss_pred HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHh
Confidence 54322 356666543221 2222 2456677776665
No 389
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=43.58 E-value=1.9e+02 Score=26.17 Aligned_cols=100 Identities=11% Similarity=0.016 Sum_probs=52.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC-CChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP-QYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p-~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..- .-.... ..++..|.++..+..|- -|.+.+++.++.
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~----~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~ 92 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGA----SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADI-----SKPSEVVALFDK 92 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC----EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHH
Confidence 4577776665555567777877776 7776543 222222 22333466666666553 267777777764
Q ss_pred hhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
.... .++.+++-+....+.+. ..+.+++++..+
T Consensus 93 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 93 AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHH
Confidence 3221 24555553222222221 345555655544
No 390
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=43.20 E-value=1.7e+02 Score=25.77 Aligned_cols=97 Identities=14% Similarity=0.030 Sum_probs=50.2
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc-CCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF-NMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-.......... +...+ ..| --|.+.+++.++...+.
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~--~~D-----~~~~~~~~~~~~~~~~~ 75 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGY----RVGLMARDEKRLQALAAELEGALPL--PGD-----VREEGDWARAVAAMEEA 75 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHSTTCEEE--ECC-----TTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHhhhceEE--Eec-----CCCHHHHHHHHHHHHHH
Confidence 477777766555667777777776 7776654322233333333 33333 333 22677777776643221
Q ss_pred -CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 157 -CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 157 -~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.++.++|-+....+.+ ...+.+++++..+
T Consensus 76 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 107 (234)
T 2ehd_A 76 FGELSALVNNAGVGVMKPVHELTLEEWRLVLD 107 (234)
T ss_dssp HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2466665432222222 1345566665554
No 391
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=42.87 E-value=1.9e+02 Score=25.99 Aligned_cols=98 Identities=16% Similarity=0.017 Sum_probs=54.7
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc-
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH- 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~- 156 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-.......+... +...+..| --|.+.+++.++...+.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~-~~~~~~~D-----v~~~~~v~~~~~~~~~~~ 73 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGD----KVCFIDIDEKRSADFAKERP-NLFYFHGD-----VADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHTTCT-TEEEEECC-----TTSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHhcc-cCCeEEee-----CCCHHHHHHHHHHHHHHc
Confidence 477787776666677778888887 88776544333333333322 23344444 22677777777653322
Q ss_pred CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 157 CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
.++.++|-+.-..+.+. ..+.+++++..+
T Consensus 74 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 104 (247)
T 3dii_A 74 QRIDVLVNNACRGSKGILSSLLYEEFDYILS 104 (247)
T ss_dssp SCCCEEEECCC-CCCCGGGTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 35666664432222222 456677776655
No 392
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=42.48 E-value=1.3e+02 Score=28.74 Aligned_cols=89 Identities=15% Similarity=0.199 Sum_probs=47.9
Q ss_pred EEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..| ..+++..+-.+-....| .|++..|.|. .++.+.+.+.++...+
T Consensus 96 ViaGvg~~~t~~ai~la~~A~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~va~ 147 (315)
T 3na8_A 96 TIVSVSDLTTAKTVRRAQFAESLGAE----AVMVLPISYW------------------------KLNEAEVFQHYRAVGE 147 (315)
T ss_dssp BEEECCCSSHHHHHHHHHHHHHTTCS----EEEECCCCSS------------------------CCCHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 565544 45666554444333334 8888888875 2234555555444332
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.....+++-++|. .||..++.+.+.+|+. +-.|+.=|=|.
T Consensus 148 a~~lPiilYn~P~-~tg~~l~~~~~~~L~a--~~pnIvgiKds 187 (315)
T 3na8_A 148 AIGVPVMLYNNPG-TSGIDMSVELILRIVR--EVDNVTMVKES 187 (315)
T ss_dssp HCSSCEEEEECHH-HHSCCCCHHHHHHHHH--HSTTEEEEEEC
T ss_pred hCCCcEEEEeCcc-hhCcCCCHHHHHHHHh--cCCCEEEEECC
Confidence 2234555555554 3688888766666532 23455555553
No 393
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=42.46 E-value=2e+02 Score=26.18 Aligned_cols=99 Identities=12% Similarity=0.065 Sum_probs=55.6
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChhH---HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPLY---SASLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
.+++|.|+...=..+.+.|.+.|. .|++. .-.-... ...+...+.++..+..|-. |.+.+++.++..
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~ 98 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGW----RVGVNYAANREAADAVVAAITESGGEAVAIPGDVG-----NAADIAAMFSAV 98 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC----EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHH
Confidence 466666666555666777888877 77654 3332222 2334455777877776633 677777777654
Q ss_pred hcc-CCceEEEEeCCCCCC-C--CCCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPT-G--QVLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPt-G--~~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-.... + ...+.+++++..+
T Consensus 99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (272)
T 4e3z_A 99 DRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLR 134 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHh
Confidence 322 356666643221111 2 1346666666655
No 394
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=42.15 E-value=1.6e+02 Score=28.18 Aligned_cols=92 Identities=12% Similarity=0.144 Sum_probs=45.8
Q ss_pred EEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..| ..+++..+-.+-....| .|++..|.|.. . ..+.+.+.+.++...+
T Consensus 83 viaGvg~~~t~~ai~la~~a~~~Gad----avlv~~P~y~~-----------------k-----p~~~~~l~~~f~~ia~ 136 (318)
T 3qfe_A 83 IMAGVGAHSTRQVLEHINDASVAGAN----YVLVLPPAYFG-----------------K-----ATTPPVIKSFFDDVSC 136 (318)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHHTCS----EEEECCCCC-------------------------CCCHHHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCC----EEEEeCCcccC-----------------C-----CCCHHHHHHHHHHHHh
Confidence 555543 45555444433332334 78888886641 0 1234555555544332
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.....+++-+.|..-+|..++.+.+.+|++ +-.|+.=|=|.
T Consensus 137 a~~lPiilYn~P~~t~g~~l~~~~~~~La~--~~pnIvgiKds 177 (318)
T 3qfe_A 137 QSPLPVVIYNFPGVCNGIDLDSDMITTIAR--KNPNVVGVKLT 177 (318)
T ss_dssp HCSSCEEEEECCC----CCCCHHHHHHHHH--HCTTEEEEEES
T ss_pred hCCCCEEEEeCCcccCCCCCCHHHHHHHHh--hCCCEEEEEeC
Confidence 224556666666655599999766666553 12466656653
No 395
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=41.89 E-value=85 Score=30.08 Aligned_cols=89 Identities=18% Similarity=0.223 Sum_probs=47.4
Q ss_pred EEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 79 VILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 79 i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
|++..| ..+++..+-.+-....| .|++..|.|. .++-+.+.+.++...+
T Consensus 94 ViaGvg~~st~~ai~la~~A~~~Gad----avlv~~P~y~------------------------~~~~~~l~~~f~~va~ 145 (315)
T 3si9_A 94 VVAGAGSNSTSEAVELAKHAEKAGAD----AVLVVTPYYN------------------------RPNQRGLYTHFSSIAK 145 (315)
T ss_dssp BEEECCCSSHHHHHHHHHHHHHTTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHHH
Confidence 555444 45555544433332334 7888888774 2234455555444332
Q ss_pred cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 156 HCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 156 ~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.....+++-++|.. ||..++.+.+.+|++ +-.|+.=|=|.
T Consensus 146 a~~lPiilYn~P~~-tg~~l~~~~~~~La~--~~pnIvgiKds 185 (315)
T 3si9_A 146 AISIPIIIYNIPSR-SVIDMAVETMRDLCR--DFKNIIGVKDA 185 (315)
T ss_dssp HCSSCEEEEECHHH-HSCCCCHHHHHHHHH--HCTTEEEEEEC
T ss_pred cCCCCEEEEeCchh-hCCCCCHHHHHHHHh--hCCCEEEEEeC
Confidence 22455555566653 788888766666543 12466556553
No 396
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=41.80 E-value=1.9e+02 Score=25.76 Aligned_cols=100 Identities=8% Similarity=-0.006 Sum_probs=54.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC-ChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ-YPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~-y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-. -.... ..++..+.++..+..|-. |.+.+++.++.
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 78 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGA----KVGLHGRKAPANIDETIASMRADGGDAAFFAADLA-----TSEACQQLVDE 78 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC----EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHH
Confidence 4577776665555667777777776 77765332 22222 223334667776666533 67788777765
Q ss_pred hhcc-CCceEEEEeCCC-CCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPG-NPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~-NPtG~--~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+... .+.+. ..+.+++++..+
T Consensus 79 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 79 FVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 3221 246666643222 22221 345555655544
No 397
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=41.80 E-value=82 Score=29.80 Aligned_cols=90 Identities=13% Similarity=0.070 Sum_probs=48.5
Q ss_pred cEEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
-|++..|+ .+++..+-.+-....| .|++..|.|.. .++.+.+.+.++...
T Consensus 74 pviaGvg~~~t~~ai~la~~A~~~Gad----avlv~~P~y~~-----------------------~~s~~~l~~~f~~va 126 (294)
T 3b4u_A 74 RIVTGVLVDSIEDAADQSAEALNAGAR----NILLAPPSYFK-----------------------NVSDDGLFAWFSAVF 126 (294)
T ss_dssp GEEEEECCSSHHHHHHHHHHHHHTTCS----EEEECCCCSSC-----------------------SCCHHHHHHHHHHHH
T ss_pred cEEEeCCCccHHHHHHHHHHHHhcCCC----EEEEcCCcCCC-----------------------CCCHHHHHHHHHHHH
Confidence 36665443 5555544444332334 78888887742 024455555554433
Q ss_pred ccC---CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC-cEEEEc
Q psy13922 155 KHC---NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREK-LFLFAD 197 (509)
Q Consensus 155 ~~~---~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~-i~lI~D 197 (509)
+.. ...+++-++|. .||..++.+.+.+|++ +-.| +.=|=|
T Consensus 127 ~a~p~~~lPiilYn~P~-~tg~~l~~~~~~~La~--~~pn~ivgiKd 170 (294)
T 3b4u_A 127 SKIGKDARDILVYNIPS-VTMVTLSVELVGRLKA--AFPGIVTGVKD 170 (294)
T ss_dssp HHHCTTCCCEEEEECHH-HHSCCCCHHHHHHHHH--HCTTTEEEEEE
T ss_pred HhcCCCCCcEEEEECcc-hhCcCCCHHHHHHHHH--hCCCcEEEEEE
Confidence 221 34455556665 4788889777777652 2245 555544
No 398
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=41.67 E-value=1.5e+02 Score=28.14 Aligned_cols=102 Identities=12% Similarity=0.036 Sum_probs=56.6
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH---HhcCC--EEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL---AEFNM--EQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~---~~~g~--~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-....... ...+. ++..+..|-. |.+.+++++
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~----~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-----~~~~v~~~~ 78 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGC----KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA-----SREGFKMAA 78 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTT-----CHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCC-----CHHHHHHHH
Confidence 34577777766555667777888887 7877655444333332 22333 5666666532 677777777
Q ss_pred Hhhhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIKF 186 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~i 186 (509)
+...+. .++.++|-+.-..+.+ ...+.++++++.+.
T Consensus 79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 117 (319)
T 3ioy_A 79 DEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGV 117 (319)
T ss_dssp HHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 654322 2456555432222222 23466777766553
No 399
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=41.53 E-value=57 Score=25.42 Aligned_cols=58 Identities=9% Similarity=0.039 Sum_probs=37.9
Q ss_pred CCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH-HHHHHHHHHHHHCCcE-EEEcccCC
Q psy13922 140 GLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK-ENIQDIIKFAHREKLF-LFADEVYQ 201 (509)
Q Consensus 140 ~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~-~~l~~l~~ia~~~~i~-lI~Deay~ 201 (509)
..+.+.|.+.+++. ++..||+-.|-|..|..-+. +..++.++..++.++. ..+||-++
T Consensus 37 ~~~~~~l~~li~e~----~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 37 EEDVEALLDFVRRE----GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHH----TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHHHc----CCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 34678888888887 89999999998888864331 2334444433333544 45777664
No 400
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=40.81 E-value=2.1e+02 Score=26.34 Aligned_cols=100 Identities=14% Similarity=0.096 Sum_probs=53.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh---c-CCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE---F-NMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~---~-g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+. . +..+..+..|-. |.+.+++.++.
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~ 104 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGY----SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVG-----DPDQVAALFAA 104 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCC-----CHHHHHHHHHH
Confidence 3566666665555566777878877 787765443333333222 1 323345555422 67777777765
Q ss_pred hhcc-CCceEEEEeCCCC-CCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGN-PTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~N-PtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-.. +.+ ...+.+++++..+
T Consensus 105 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~ 141 (281)
T 4dry_A 105 VRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVA 141 (281)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 4322 3566665442221 211 2356677777665
No 401
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=40.75 E-value=1.6e+02 Score=27.21 Aligned_cols=102 Identities=14% Similarity=0.011 Sum_probs=55.0
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC-CChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP-QYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p-~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
....+++|.|+...=..+.+.|.+.|. .|++..- .-.... ..+...|.++..+..|-. |.+.+++.+
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~----~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~ 98 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGF----DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLA-----DLSSHQATV 98 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTT-----SGGGHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC----eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHH
Confidence 334577777776655677778888887 7776542 222222 223345677777766633 566666666
Q ss_pred Hhhhcc-CCceEEEEeCCC--CCCC--CCCCHHHHHHHHH
Q psy13922 151 TEARKH-CNPRAIVIINPG--NPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 151 ~~~~~~-~~~~~ivi~~p~--NPtG--~~~s~~~l~~l~~ 185 (509)
+...+. .++.++|-+.-. .+.+ ..++.+++++..+
T Consensus 99 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 138 (280)
T 4da9_A 99 DAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVG 138 (280)
T ss_dssp HHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTT
T ss_pred HHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHH
Confidence 543222 356766644322 1111 1345566665443
No 402
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=40.29 E-value=2.1e+02 Score=25.87 Aligned_cols=101 Identities=9% Similarity=-0.086 Sum_probs=53.0
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCC--EEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNM--EQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~--~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+..+. ++..+..|- -|.+.+++.++..
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~ 86 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGA----KVVIADIADDHGQKVCNNIGSPDVISFVHCDV-----TKDEDVRNLVDTT 86 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEcCChhHHHHHHHHhCCCCceEEEECCC-----CCHHHHHHHHHHH
Confidence 34688887776666677777887776 777764432222223332221 344454442 2677777777643
Q ss_pred hcc-CCceEEEEeCCCC-C-CC--CCCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGN-P-TG--QVLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~N-P-tG--~~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-.. + .+ ...+.+++++..+
T Consensus 87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 123 (278)
T 2bgk_A 87 IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMD 123 (278)
T ss_dssp HHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHH
Confidence 221 2466666432111 1 11 2345566666554
No 403
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=40.28 E-value=70 Score=30.43 Aligned_cols=89 Identities=17% Similarity=0.276 Sum_probs=50.0
Q ss_pred cEEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
-|++..| ..+++..+-.+-....| .|++..|.|. .++-+.+.+.++...
T Consensus 79 pviaGvg~~~t~~ai~la~~a~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~va 130 (301)
T 3m5v_A 79 KVLAGAGSNATHEAVGLAKFAKEHGAD----GILSVAPYYN------------------------KPTQQGLYEHYKAIA 130 (301)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHHTTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCC----EEEEcCCCCC------------------------CCCHHHHHHHHHHHH
Confidence 3665544 45555444333332334 7888888774 223455555554433
Q ss_pred ccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH-CCcEEEEcc
Q psy13922 155 KHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHR-EKLFLFADE 198 (509)
Q Consensus 155 ~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~-~~i~lI~De 198 (509)
+.....+++-++|.. ||..++.+.+.+|++ . .|+.=|=|.
T Consensus 131 ~a~~lPiilYn~P~~-tg~~l~~~~~~~La~---~~pnivgiKds 171 (301)
T 3m5v_A 131 QSVDIPVLLYNVPGR-TGCEISTDTIIKLFR---DCENIYGVKEA 171 (301)
T ss_dssp HHCSSCEEEEECHHH-HSCCCCHHHHHHHHH---HCTTEEEEEEC
T ss_pred HhCCCCEEEEeCchh-hCcCCCHHHHHHHHh---cCCCEEEEEeC
Confidence 222455555565553 789999777777654 4 566666664
No 404
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=39.65 E-value=2e+02 Score=29.62 Aligned_cols=103 Identities=14% Similarity=0.168 Sum_probs=55.7
Q ss_pred CCCcEEEeCCHHHHH-HHHHHHhhcCCCCCCCeEEEc-CCC----------------ChhHHHHHHhcCCEEEEEecCCC
Q psy13922 75 DWQDVILSAGASDGI-KSVLKLLIEDVDGKKPGVLIP-IPQ----------------YPLYSASLAEFNMEQIGYYLDES 136 (509)
Q Consensus 75 ~~~~i~~t~G~~~al-~~~~~~l~~~gd~~~~~Vlv~-~p~----------------y~~~~~~~~~~g~~~~~v~~~~~ 136 (509)
+++.+++.+|++.+| ..+.+.|.+.|. ..|++. .-. -......++..|.++..+..|-.
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~---~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt 325 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGA---GHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT 325 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTC---CEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC---CEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC
Confidence 344554444444444 445566666664 135554 222 22334445667888888887643
Q ss_pred CCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 137 KQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 137 ~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
|.+.+++.++...+..++.+||-+.-....+. .++.+++++..+
T Consensus 326 -----d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 326 -----DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp -----SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 78999998887432234555553322222222 456666766654
No 405
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=39.28 E-value=1.8e+02 Score=26.51 Aligned_cols=80 Identities=15% Similarity=-0.054 Sum_probs=43.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC-CChhHHHHHHh---c-CCEEEEEecCCCCCCCCCH----HHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP-QYPLYSASLAE---F-NMEQIGYYLDESKQWGLPI----SELE 147 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p-~y~~~~~~~~~---~-g~~~~~v~~~~~~~~~~d~----~~L~ 147 (509)
..+++|.|+...=..+.+.|.+.|. .|++..- .-.......+. . |.++..+..|-. |. +.++
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~ 82 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGF----RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS-----LSSSLLDCCE 82 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-----SSTTHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCC-----CccccHHHHH
Confidence 3577776666555667777887776 7777644 32222222222 2 556666665532 44 6666
Q ss_pred HHHHhhhcc-CCceEEEEe
Q psy13922 148 RSITEARKH-CNPRAIVII 165 (509)
Q Consensus 148 ~~i~~~~~~-~~~~~ivi~ 165 (509)
+.++...+. .++.++|-+
T Consensus 83 ~~~~~~~~~~g~id~lv~n 101 (276)
T 1mxh_A 83 DIIDCSFRAFGRCDVLVNN 101 (276)
T ss_dssp HHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEC
Confidence 666543221 246666543
No 406
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=39.19 E-value=2e+02 Score=25.36 Aligned_cols=99 Identities=13% Similarity=0.052 Sum_probs=53.3
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
.+++|.|+...=..+.+.|.+.|. .|++. .-.-.... ..++..+.++..+..|-. |.+.+++.++..
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~----~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~ 73 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGC----KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS-----KEADVEAMMKTA 73 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTT-----SHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC----EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCC-----CHHHHHHHHHHH
Confidence 366776665555667777777776 77763 43322222 223334667776666533 677887777653
Q ss_pred hcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 154 RKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 154 ~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.+. .++.++|-+.-....+ ...+.+++++..+
T Consensus 74 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 74 IDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 222 2466666432222222 1345566665554
No 407
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=39.06 E-value=1.8e+02 Score=27.84 Aligned_cols=106 Identities=11% Similarity=0.098 Sum_probs=62.3
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC--CCChhHHH--HHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI--PQYPLYSA--SLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
+....+++|.|.+.....++....+.|. +-+|++.+ |.+.+... .+...|.++..++- ..+...
T Consensus 119 I~~g~~ILTh~~S~tv~~~l~~A~~~gk--~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~D----------sa~~~~ 186 (315)
T 3ecs_A 119 IKDGATILTHAYSRVVLRVLEAAVAAKK--RFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLD----------AAVGYI 186 (315)
T ss_dssp CCTTEEEEECSCCHHHHHHHHHHHTTTC--CEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECG----------GGHHHH
T ss_pred cCCCCEEEEcCCcHHHHHHHHHHHHcCC--eEEEEEecCCCcchHHHHHHHHHHcCCCEEEEeh----------hHHHHH
Confidence 4556788887777666666666655442 33566653 66665443 34456887776642 223233
Q ss_pred HHhhhccCCceEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 150 ITEARKHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 150 i~~~~~~~~~~~ivi~-~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
+. ++..+++. .---..|.++++----.++-.|+.+|+++++=
T Consensus 187 m~------~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 187 ME------KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp GG------GCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred HH------hCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 33 36666652 33334455555544556777889999888763
No 408
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=39.01 E-value=79 Score=30.31 Aligned_cols=88 Identities=15% Similarity=0.189 Sum_probs=47.9
Q ss_pred cEEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
-|++..| ..+++..+-.+-....| .|++..|.|. .++.+.+.+.++...
T Consensus 94 pViaGvg~~st~eai~la~~A~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~va 145 (314)
T 3qze_A 94 PVIAGTGANSTREAVALTEAAKSGGAD----ACLLVTPYYN------------------------KPTQEGMYQHFRHIA 145 (314)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHTTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHH
T ss_pred cEEEeCCCcCHHHHHHHHHHHHHcCCC----EEEEcCCCCC------------------------CCCHHHHHHHHHHHH
Confidence 3666544 45555544433333334 7888788774 223445555444433
Q ss_pred ccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 155 KHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 155 ~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
+.....+++-++|.. ||..++.+.+.+|++ -.|+.=|=|
T Consensus 146 ~a~~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKd 184 (314)
T 3qze_A 146 EAVAIPQILYNVPGR-TSCDMLPETVERLSK---VPNIIGIKE 184 (314)
T ss_dssp HHSCSCEEEEECHHH-HSCCCCHHHHHHHHT---STTEEEEEE
T ss_pred HhcCCCEEEEeCccc-cCCCCCHHHHHHHhc---CCCEEEEEc
Confidence 222455555555543 788888777666653 346665655
No 409
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=38.93 E-value=2.2e+02 Score=25.74 Aligned_cols=100 Identities=7% Similarity=-0.000 Sum_probs=55.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++. .-.-.... ..+...+.++..+..|-. |.+.+++.++.
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~----~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~~~~~~~~ 97 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGF----NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVA-----NREQCREVLEH 97 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHH
Confidence 4577777776655677778888887 77553 33222222 233344666666666532 67777777765
Q ss_pred hhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
..+. .++..+|-+.-....+. ..+.+++++..+
T Consensus 98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 133 (267)
T 4iiu_A 98 EIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIH 133 (267)
T ss_dssp HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 3322 35666654322222221 356677776655
No 410
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=38.91 E-value=2.2e+02 Score=25.66 Aligned_cols=79 Identities=11% Similarity=0.045 Sum_probs=45.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..|.++..+..|-. |.+.+++.++..
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~ 76 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGA----TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSS-----QESEVRSLFEQV 76 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTT-----SHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCC-----CHHHHHHHHHHH
Confidence 3567776666555667777888777 787765433322222 2333667777766533 677777777653
Q ss_pred hc--cCCceEEEE
Q psy13922 154 RK--HCNPRAIVI 164 (509)
Q Consensus 154 ~~--~~~~~~ivi 164 (509)
.+ ..++.++|-
T Consensus 77 ~~~~~g~id~lvn 89 (260)
T 2qq5_A 77 DREQQGRLDVLVN 89 (260)
T ss_dssp HHHHTTCCCEEEE
T ss_pred HHhcCCCceEEEE
Confidence 21 124566553
No 411
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=38.87 E-value=1.5e+02 Score=27.90 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=47.9
Q ss_pred cEEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
-|++..| ..+++..+-.+-....| .|++..|.|. .++-+.+.+.++...
T Consensus 78 pviaGvg~~~t~~ai~la~~a~~~Gad----avlv~~P~y~------------------------~~~~~~l~~~f~~va 129 (297)
T 3flu_A 78 PVIAGTGANNTVEAIALSQAAEKAGAD----YTLSVVPYYN------------------------KPSQEGIYQHFKTIA 129 (297)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHTTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHH
T ss_pred cEEEeCCCcCHHHHHHHHHHHHHcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHH
Confidence 3665544 45555444333332334 7888788764 223444544444432
Q ss_pred ccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 155 KHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 155 ~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
+.....+++-++|.. ||..++.+.+.+|+ +-.|+.=|=|.
T Consensus 130 ~a~~lPiilYn~P~~-tg~~l~~~~~~~La---~~pnivgiKds 169 (297)
T 3flu_A 130 EATSIPMIIYNVPGR-TVVSMTNDTILRLA---EIPNIVGVKEA 169 (297)
T ss_dssp HHCCSCEEEEECHHH-HSSCCCHHHHHHHT---TSTTEEEEEEC
T ss_pred HhCCCCEEEEECCch-hccCCCHHHHHHHH---cCCCEEEEEeC
Confidence 222455555566653 78888877766654 33466556553
No 412
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=38.82 E-value=1.1e+02 Score=27.18 Aligned_cols=64 Identities=8% Similarity=0.043 Sum_probs=44.8
Q ss_pred HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC----cE
Q psy13922 118 SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREK----LF 193 (509)
Q Consensus 118 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~----i~ 193 (509)
...++..|.+++.+-. ..+.+.+.+.+.+. ++.+|.++.-..+ +.+.++++++.+++.+ +.
T Consensus 109 a~~l~~~G~~v~~LG~------~vp~~~l~~~~~~~----~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~~~~~~~ 173 (210)
T 1y80_A 109 AMMLESGGFTVYNLGV------DIEPGKFVEAVKKY----QPDIVGMSALLTT-----TMMNMKSTIDALIAAGLRDRVK 173 (210)
T ss_dssp HHHHHHTTCEEEECCS------SBCHHHHHHHHHHH----CCSEEEEECCSGG-----GTHHHHHHHHHHHHTTCGGGCE
T ss_pred HHHHHHCCCEEEECCC------CCCHHHHHHHHHHc----CCCEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCe
Confidence 3456778999987543 34688888888776 8999988754322 2356888888888754 56
Q ss_pred EEE
Q psy13922 194 LFA 196 (509)
Q Consensus 194 lI~ 196 (509)
|++
T Consensus 174 v~v 176 (210)
T 1y80_A 174 VIV 176 (210)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 413
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=38.43 E-value=1.2e+02 Score=28.52 Aligned_cols=88 Identities=14% Similarity=0.236 Sum_probs=47.0
Q ss_pred cEEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
-|++..| ..+++..+-.+-....| .|++..|.|. .++-+.+.+.++...
T Consensus 73 pviaGvg~~~t~~ai~la~~a~~~Gad----avlv~~P~y~------------------------~~~~~~l~~~f~~ia 124 (292)
T 3daq_A 73 PVIAGTGTNDTEKSIQASIQAKALGAD----AIMLITPYYN------------------------KTNQRGLVKHFEAIA 124 (292)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHHHTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHH
T ss_pred cEEEeCCcccHHHHHHHHHHHHHcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHH
Confidence 3555443 45555444333322334 7777777764 223444444444322
Q ss_pred ccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 155 KHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 155 ~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
+.....+++-++|.. ||..++.+.+.+|++ -.|+.=|=|
T Consensus 125 ~a~~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnivgiK~ 163 (292)
T 3daq_A 125 DAVKLPVVLYNVPSR-TNMTIEPETVEILSQ---HPYIVALKD 163 (292)
T ss_dssp HHHCSCEEEEECHHH-HSCCCCHHHHHHHHT---STTEEEEEE
T ss_pred HhCCCCEEEEecccc-cCCCCCHHHHHHHhc---CCCEEEEEe
Confidence 211344555455543 788999777777664 346666666
No 414
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=38.32 E-value=1.9e+02 Score=25.57 Aligned_cols=79 Identities=10% Similarity=0.033 Sum_probs=45.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChhH---HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPLY---SASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++. ...-... ...++..+.++..+..|-. |.+.+++.++.
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~----~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 76 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGA----NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVK-----NPEDVENMVKT 76 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC----EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTT-----SHHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC----EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHH
Confidence 4577777666555667777777776 77765 3322222 2223344666666666533 67777777765
Q ss_pred hhcc-CCceEEEE
Q psy13922 153 ARKH-CNPRAIVI 164 (509)
Q Consensus 153 ~~~~-~~~~~ivi 164 (509)
..+. .++.++|-
T Consensus 77 ~~~~~~~~d~vi~ 89 (247)
T 2hq1_A 77 AMDAFGRIDILVN 89 (247)
T ss_dssp HHHHHSCCCEEEE
T ss_pred HHHhcCCCCEEEE
Confidence 3221 24666653
No 415
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=38.26 E-value=1.5e+02 Score=26.72 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=52.5
Q ss_pred CCCCcEEEeCCH--HHHHHHHHHHhhcCCCCCCCeEEEcCCCChh---HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHH
Q psy13922 74 ADWQDVILSAGA--SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL---YSASLAEFNMEQIGYYLDESKQWGLPISELER 148 (509)
Q Consensus 74 ~~~~~i~~t~G~--~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 148 (509)
.+...+++|.|+ ...=..+.+.|.+.|. .|++..-.-.. .....+..+ ++..+..|- -|.+.+++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv-----~~~~~v~~ 81 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGA----ELAFTYVGDRFKDRITEFAAEFG-SELVFPCDV-----ADDAQIDA 81 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC----EEEEEESSGGGHHHHHHHHHHTT-CCCEEECCT-----TCHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCC----CEEEEecchhhHHHHHHHHHHcC-CcEEEECCC-----CCHHHHHH
Confidence 344567887765 4444566677777776 77766433111 122223333 344444442 26777777
Q ss_pred HHHhhhcc-CCceEEEEeCCCCCC----CC---CCCHHHHHHHHH
Q psy13922 149 SITEARKH-CNPRAIVIINPGNPT----GQ---VLTKENIQDIIK 185 (509)
Q Consensus 149 ~i~~~~~~-~~~~~ivi~~p~NPt----G~---~~s~~~l~~l~~ 185 (509)
.++...+. .++.++|-+.-..+. +. ..+.+++++..+
T Consensus 82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (271)
T 3ek2_A 82 LFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHD 126 (271)
T ss_dssp HHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHh
Confidence 77654332 345655533222111 11 256667766655
No 416
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=38.25 E-value=74 Score=30.39 Aligned_cols=98 Identities=10% Similarity=0.017 Sum_probs=57.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC--C-CChhH---HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI--P-QYPLY---SASLAEFNMEQIGYYLDESKQWGLPISELERSI 150 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~--p-~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i 150 (509)
..|++|.++-..=..+++.|.+.|. .|.+.. + ....- ...+...+++++..++. |.+.+.+++
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~----~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~-------d~~~l~~~~ 79 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHR----PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN-------EQEAMEKIL 79 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTC----CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT-------CHHHHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCC----CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC-------CHHHHHHHH
Confidence 4688887744444556666766665 554432 2 11111 12334467777765433 689999999
Q ss_pred HhhhccCCceEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHCC-cEEEE
Q psy13922 151 TEARKHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHREK-LFLFA 196 (509)
Q Consensus 151 ~~~~~~~~~~~ivi~-~p~NPtG~~~s~~~l~~l~~ia~~~~-i~lI~ 196 (509)
+.. ++.+||-+ .+.|..| -..|++.|++.+ +..++
T Consensus 80 ~~~----~~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 80 KEH----EIDIVVSTVGGESILD-------QIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp HHT----TCCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEE
T ss_pred hhC----CCCEEEECCchhhHHH-------HHHHHHHHHHcCCceEEe
Confidence 854 57777654 3334332 468888888888 54444
No 417
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=38.23 E-value=97 Score=29.59 Aligned_cols=90 Identities=16% Similarity=0.152 Sum_probs=51.3
Q ss_pred cEEEeCC---HHHHHHHHHHHhhcCC-CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 78 DVILSAG---ASDGIKSVLKLLIEDV-DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 78 ~i~~t~G---~~~al~~~~~~l~~~g-d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
-|++..| ..+++..+-.+-.-.+ | .|++..|.|. .++.+.+.+.++..
T Consensus 78 pViaGvg~~~t~~ai~la~~A~~~Ga~d----avlv~~P~y~------------------------~~s~~~l~~~f~~v 129 (311)
T 3h5d_A 78 PLIAGVGTNDTRDSIEFVKEVAEFGGFA----AGLAIVPYYN------------------------KPSQEGMYQHFKAI 129 (311)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHSCCCS----EEEEECCCSS------------------------CCCHHHHHHHHHHH
T ss_pred cEEEeCCCcCHHHHHHHHHHHHhcCCCc----EEEEcCCCCC------------------------CCCHHHHHHHHHHH
Confidence 4666544 4455544433332233 5 8888888875 22345555555544
Q ss_pred hccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 154 RKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 154 ~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
.+.....+++-++|.. ||..++.+.+.+|++ ..|+.=|=|..
T Consensus 130 a~a~~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKdss 171 (311)
T 3h5d_A 130 ADASDLPIIIYNIPGR-VVVELTPETMLRLAD---HPNIIGVKECT 171 (311)
T ss_dssp HHSCSSCEEEEECHHH-HSSCCCHHHHHHHHT---STTEEEEEECS
T ss_pred HHhCCCCEEEEecccc-cCCCCCHHHHHHHhc---CCCEEEEEeCC
Confidence 3332445555555543 788999777777664 35777677644
No 418
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=38.09 E-value=1.9e+02 Score=26.03 Aligned_cols=100 Identities=12% Similarity=0.068 Sum_probs=53.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHH----HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYS----ASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.... ...+..+.++..+..|-. |.+.+++.++.
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~ 78 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGY----SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVT-----KKEDLHKIVEE 78 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTT-----SHHHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCC----EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHH
Confidence 3577776666555667778888776 7776532222222 222333556666666533 67787777765
Q ss_pred hhcc-CCceEEEEeCC--CCCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINP--GNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p--~NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.- ..+.+ ...+.+++++..+
T Consensus 79 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~ 116 (264)
T 3i4f_A 79 AMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQ 116 (264)
T ss_dssp HHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHH
T ss_pred HHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHH
Confidence 4322 35666553321 11111 2346666666554
No 419
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=37.66 E-value=44 Score=28.34 Aligned_cols=60 Identities=22% Similarity=0.171 Sum_probs=40.6
Q ss_pred CCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCH-HHHHHHH-HHHHHCCcE-EEEcccCCc
Q psy13922 139 WGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTK-ENIQDII-KFAHREKLF-LFADEVYQD 202 (509)
Q Consensus 139 ~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~-~~l~~l~-~ia~~~~i~-lI~Deay~~ 202 (509)
...+.+.|.+.+++. ++..|++-.|-|..|..-.. ...+.++ .+++++++. .++||.|+.
T Consensus 40 ~~~~~~~l~~li~~~----~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 40 GDYGLSRLSELIKDY----TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp TBCCHHHHHHHHTTS----EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred hHHHHHHHHHHHHHc----CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 355789999999886 89999999998877775322 2234555 334445655 456888864
No 420
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=37.44 E-value=2.2e+02 Score=25.16 Aligned_cols=99 Identities=8% Similarity=-0.016 Sum_probs=51.2
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChhHHHH---HHhcCCEEEE-EecCCCCCCCCCHHHHHHHHHh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPLYSAS---LAEFNMEQIG-YYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~~~~~---~~~~g~~~~~-v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
.+++|.|+...=..+.+.|.+.|. .|++. .-.-...... +...+.++.. +..|- -|.+.+++.++.
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~----~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~ 73 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGF----ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL-----LEAEAATALVHQ 73 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTC----EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCT-----TSHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC----EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccC-----CCHHHHHHHHHH
Confidence 467776665555666777877776 77765 4332222222 2333544444 44442 267777777664
Q ss_pred hhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+....+.+ ...+.+++++..+
T Consensus 74 ~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (245)
T 2ph3_A 74 AAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLE 109 (245)
T ss_dssp HHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 3221 2567666442222222 2345566655544
No 421
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=37.18 E-value=2.4e+02 Score=26.14 Aligned_cols=104 Identities=12% Similarity=0.080 Sum_probs=55.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh-----cCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE-----FNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~-----~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
..+++|.|+...=..+.+.|.+.|. ....|++..-.-.......+. .+.++..+..|-. |.+.+++.++
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~-~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~ 107 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASN-GDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-----QAEKIKPFIE 107 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-----CGGGHHHHHH
T ss_pred CEEEEecCCChHHHHHHHHHHHcCC-CCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHH
Confidence 4577777665544555666665442 011555554443333333222 1677777776633 6788888887
Q ss_pred hhhcc-CCceEEEEeCCCC-CCC--CCCCHHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGN-PTG--QVLTKENIQDIIKF 186 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~N-PtG--~~~s~~~l~~l~~i 186 (509)
...+. .++.++|-+.-.. +.+ ..++.+++++..++
T Consensus 108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 64332 3566655432211 122 24577778776653
No 422
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=37.00 E-value=2.3e+02 Score=25.35 Aligned_cols=100 Identities=11% Similarity=0.048 Sum_probs=53.7
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC-CChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP-QYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p-~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..- .-.... ..++..+.++..+..|-. |.+.+++.++.
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~----~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 78 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKA----KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVT-----VESDVINLVQS 78 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC----EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHH
Confidence 4577776665555666777777776 7776543 222222 223334666666666533 67777777664
Q ss_pred hhcc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 79 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 1gee_A 79 AIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVID 114 (261)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3221 2466666442222222 2345566665554
No 423
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=36.85 E-value=2.3e+02 Score=25.41 Aligned_cols=101 Identities=16% Similarity=0.096 Sum_probs=55.0
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-...... +...|.++..+..|-. |.+.+++.++.
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 84 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGA----HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVG-----KAEDRERLVAM 84 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHH
Confidence 34577777666555667777888776 777764432222222 2334656666655532 67777776664
Q ss_pred hhcc-CCceEEEEeCCCCC-CC--CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNP-TG--QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NP-tG--~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-..+ .+ ...+.+++++..+
T Consensus 85 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 85 AVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 3221 25666654322221 12 2356666766555
No 424
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=36.58 E-value=2.3e+02 Score=25.31 Aligned_cols=101 Identities=8% Similarity=0.010 Sum_probs=51.4
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc---C-------CEEEEEecCCCCCCCCCHHH
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF---N-------MEQIGYYLDESKQWGLPISE 145 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~---g-------~~~~~v~~~~~~~~~~d~~~ 145 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.......+.. | .++..+..|- -|.+.
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~ 77 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGA----TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADV-----SEARA 77 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSHHHHHHHHHTC------------CCEEEECCT-----TSHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecC-----CCHHH
Confidence 34678887766655667777877776 7777654433333332222 2 2334444432 26777
Q ss_pred HHHHHHhhhcc-CCc-eEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 146 LERSITEARKH-CNP-RAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 146 L~~~i~~~~~~-~~~-~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+++.++...+. .++ .++|-+.-..+.+ ...+.+++++..+
T Consensus 78 ~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (264)
T 2pd6_A 78 ARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIA 121 (264)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHh
Confidence 77777653221 234 5655332222222 1345566665554
No 425
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=36.53 E-value=2.2e+02 Score=25.89 Aligned_cols=68 Identities=9% Similarity=-0.062 Sum_probs=38.4
Q ss_pred CcEEEeCC--HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh-HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 77 QDVILSAG--ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL-YSASLAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 77 ~~i~~t~G--~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
..+++|.| +...=..+.+.|.+.|. .|++..-.-.. .....+..+.++..+..|- -|.+.+++.++..
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 78 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGA----QLVLTGFDRLRLIQRITDRLPAKAPLLELDV-----QNEEHLASLAGRV 78 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTC----EEEEEECSCHHHHHHHHTTSSSCCCEEECCT-----TCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCC----EEEEEecChHHHHHHHHHhcCCCceEEEccC-----CCHHHHHHHHHHH
Confidence 45777766 44444556667777776 77776543332 2333344454555555542 2677777777654
No 426
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.24 E-value=2.4e+02 Score=25.34 Aligned_cols=97 Identities=11% Similarity=0.027 Sum_probs=52.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.. ....+..+ + ..+..|- -|.+.+++.++...+.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~-----~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGA----LVALCDLRPEG-KEVAEAIG-G-AFFQVDL-----EDERERVRFVEEAAYA 74 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSTTH-HHHHHHHT-C-EEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCChhH-HHHHHHhh-C-CEEEeeC-----CCHHHHHHHHHHHHHH
Confidence 4577887776656677777888776 77765433233 33333333 2 3344432 2677777776653221
Q ss_pred -CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 157 -CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 157 -~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
.++.++|-+.-..+.+ ...+.+++++..+
T Consensus 75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2566665432222222 2345666666655
No 427
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=36.21 E-value=2.5e+02 Score=25.63 Aligned_cols=100 Identities=10% Similarity=0.030 Sum_probs=54.8
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChh----HHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPL----YSASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.. ....++..|.++..+..|-. |.+.+++.++.
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 100 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGC----KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG-----VVEDIVRMFEE 100 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCC-----CHHHHHHHHHH
Confidence 4577776665555667777888776 77765433221 12233445667776666532 67777777665
Q ss_pred hhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-....+. ..+.+++++..+
T Consensus 101 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 136 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFT 136 (283)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3221 24666553322222221 246667766655
No 428
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=35.74 E-value=2.2e+02 Score=26.56 Aligned_cols=48 Identities=8% Similarity=0.054 Sum_probs=38.7
Q ss_pred CCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 139 WGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 139 ~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
|.+|..++.++..- ...+|++..- .++.++++++.+.|++.|+-+++|
T Consensus 128 fi~d~~qi~ea~~~-----GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lve 175 (272)
T 3tsm_A 128 FLFDPYQVYEARSW-----GADCILIIMA------SVDDDLAKELEDTAFALGMDALIE 175 (272)
T ss_dssp CCCSTHHHHHHHHT-----TCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCHHHHHHHHHc-----CCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEE
Confidence 57788888887665 6888887633 457789999999999999998887
No 429
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=35.27 E-value=84 Score=29.48 Aligned_cols=21 Identities=10% Similarity=0.460 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHCCcEEEEc
Q psy13922 177 KENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~D 197 (509)
.+.+++++++|.++|+.||+|
T Consensus 64 ~~~ld~~v~~a~~~Gi~Vild 84 (302)
T 1bqc_A 64 PSDVANVISLCKQNRLICMLE 84 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEE
Confidence 477889999999999999888
No 430
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=35.27 E-value=2.5e+02 Score=25.23 Aligned_cols=102 Identities=10% Similarity=-0.030 Sum_probs=54.2
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..+.++..+..|-. |.+.+++.++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~ 83 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGA----VIHTCARNEYELNECLSKWQKKGFQVTGSVCDAS-----LRPEREKLMQ 83 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCC-----CHHHHHHHHH
Confidence 334577776666555667777877776 777665432222222 2333556666655532 6777777775
Q ss_pred hhhcc--CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 152 EARKH--CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~--~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (266)
T 1xq1_A 84 TVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHIS 121 (266)
T ss_dssp HHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHH
T ss_pred HHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 43211 2567776543222222 2345666666554
No 431
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=35.08 E-value=2.1e+02 Score=25.96 Aligned_cols=92 Identities=13% Similarity=0.060 Sum_probs=50.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.. +.++..+..|- -|.+.+++.++...+.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~--------~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 71 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEGS----KVIDLSIHDPG--------EAKYDHIECDV-----TNPDQVKASIDHIFKE 71 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTC----EEEEEESSCCC--------SCSSEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEecCccc--------CCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 4578887776666677778888776 77764322111 23334444442 2677777777653222
Q ss_pred -CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 157 -CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 157 -~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
.++.++|-+.-....+. ..+.++++++.+
T Consensus 72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (264)
T 2dtx_A 72 YGSISVLVNNAGIESYGKIESMSMGEWRRIID 103 (264)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 25666664422222221 346677776665
No 432
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=34.93 E-value=2.5e+02 Score=25.19 Aligned_cols=100 Identities=9% Similarity=0.072 Sum_probs=54.5
Q ss_pred CcEEEeCCHHHHHHHHHHHhhc---CCCCCCCeEEEcCCCChhHHHHHHhc-----CCEEEEEecCCCCCCCCCHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIE---DVDGKKPGVLIPIPQYPLYSASLAEF-----NMEQIGYYLDESKQWGLPISELER 148 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~---~gd~~~~~Vlv~~p~y~~~~~~~~~~-----g~~~~~v~~~~~~~~~~d~~~L~~ 148 (509)
..+++|.|+...=..+.+.|.+ .|. .|++..-.-.......+.. |.++..+..|-. |.+.+++
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----~~~~v~~ 77 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPGS----VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG-----TEAGVQR 77 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTC----EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTT-----SHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCCC----eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCC-----CHHHHHH
Confidence 3567776666555566677776 676 7877654433333332222 667777766533 6788887
Q ss_pred HHHhhhc--c-CCce-EEEEeCCCC--CC-CC--C-CCHHHHHHHHH
Q psy13922 149 SITEARK--H-CNPR-AIVIINPGN--PT-GQ--V-LTKENIQDIIK 185 (509)
Q Consensus 149 ~i~~~~~--~-~~~~-~ivi~~p~N--Pt-G~--~-~s~~~l~~l~~ 185 (509)
.++...+ . .+.. -++++|..- +. +. - .+.+++++..+
T Consensus 78 ~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~ 124 (259)
T 1oaa_A 78 LLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124 (259)
T ss_dssp HHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHH
T ss_pred HHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHH
Confidence 7766432 1 1233 144554432 11 11 1 56677777665
No 433
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=34.84 E-value=2.5e+02 Score=25.04 Aligned_cols=100 Identities=8% Similarity=-0.014 Sum_probs=54.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEc-CCCChhHH---HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIP-IPQYPLYS---ASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~-~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++. ...-.... ..++..+.++..+..+-. |.+.+++.++.
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 78 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGA----LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE-----SLHGVEALYSS 78 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC----eEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcC-----CHHHHHHHHHH
Confidence 4577777766555667777888776 77663 33333322 233455777777766533 56666666554
Q ss_pred hhcc-------CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 153 ARKH-------CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-------~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-..+.+. ..+.+++++..+
T Consensus 79 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 120 (255)
T 3icc_A 79 LDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVS 120 (255)
T ss_dssp HHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHh
Confidence 2111 12555554432333332 346666666554
No 434
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=34.64 E-value=2e+02 Score=26.91 Aligned_cols=102 Identities=18% Similarity=0.156 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEe
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYY 132 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 132 (509)
.+=|..+.+...+. +. . |++..|+ .+++..+-.+-....| .|++..|.|..
T Consensus 51 ~eEr~~v~~~~~~~----~~-g-ViaGvg~~~t~~ai~la~~A~~~Gad----avlv~~P~y~~---------------- 104 (288)
T 2nuw_A 51 KDEKRQNLNALYDV----TH-K-LIFQVGSLNLNDVMELVKFSNEMDIL----GVSSHSPYYFP---------------- 104 (288)
T ss_dssp HHHHHHHHHHHTTT----CS-C-EEEECCCSCHHHHHHHHHHHHTSCCS----EEEECCCCSSC----------------
T ss_pred HHHHHHHHHHHHHH----hC-C-eEEeeCCCCHHHHHHHHHHHHhcCCC----EEEEcCCcCCC----------------
Confidence 34455566655322 11 2 7776554 5555544433332334 88888888752
Q ss_pred cCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 133 LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 133 ~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.++.+.+.+.++...+.....+++-++|.. ||..++.+.+.+| |+.=|=|.
T Consensus 105 -------~~s~~~l~~~f~~va~a~~lPiilYn~P~~-tg~~l~~~~~~~L-------nIvgiKds 155 (288)
T 2nuw_A 105 -------RLPEKFLAKYYEEIARISSHSLYIYNYPAA-TGYDIPPSILKSL-------PVKGIKDT 155 (288)
T ss_dssp -------SCCHHHHHHHHHHHHHHCCSCEEEEECHHH-HSCCCCHHHHTTT-------TEEEEEEC
T ss_pred -------CCCHHHHHHHHHHHHHhcCCCEEEEECchH-hCcCCCHHHHhcc-------EEEEEEeC
Confidence 024455555554433322455666566654 7999998888777 55555553
No 435
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=34.58 E-value=2.1e+02 Score=26.29 Aligned_cols=100 Identities=9% Similarity=0.057 Sum_probs=54.2
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcC--CEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFN--MEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g--~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......+... .++..+..|- -|.+.+++.++...
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 92 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGW----SLVLTGRREERLQALAGELSAKTRVLPLTLDV-----RDRAAMSAAVDNLP 92 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHTTTSCEEEEECCT-----TCHHHHHHHHHTCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 4577776665555566777777777 77776544333333333322 2455555552 37888888887642
Q ss_pred cc-CCceEEEEeCCCCC-CC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNP-TG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NP-tG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-... .+ ...+.+++++..+
T Consensus 93 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~ 127 (272)
T 2nwq_A 93 EEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVD 127 (272)
T ss_dssp GGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 22 34566554322111 12 2355666666555
No 436
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=33.99 E-value=3.7e+02 Score=26.82 Aligned_cols=78 Identities=9% Similarity=-0.060 Sum_probs=44.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhhc-CCCCCCCeEEEcCCCCh---------------hHHHHHHhcCCEEEEEecCCCCCCC
Q psy13922 77 QDVILSAGASDGIKSVLKLLIE-DVDGKKPGVLIPIPQYP---------------LYSASLAEFNMEQIGYYLDESKQWG 140 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~p~y~---------------~~~~~~~~~g~~~~~v~~~~~~~~~ 140 (509)
..+++|.|++.-=..+...|.. .|. .|++..-.-. .....++..|.+...+..|-
T Consensus 62 KvaLVTGASsGIG~AiA~~LA~~~GA----~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv----- 132 (422)
T 3s8m_A 62 KKVLVIGASSGYGLASRITAAFGFGA----DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA----- 132 (422)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHHHCC----EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT-----
T ss_pred CEEEEECCChHHHHHHHHHHHHhCCC----EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC-----
Confidence 3566666665444455566666 676 6665321100 02244566788888887763
Q ss_pred CCHHHHHHHHHhhhcc--CCceEEE
Q psy13922 141 LPISELERSITEARKH--CNPRAIV 163 (509)
Q Consensus 141 ~d~~~L~~~i~~~~~~--~~~~~iv 163 (509)
.|.+.++++++...+. .++.++|
T Consensus 133 td~~~v~~~v~~i~~~~~G~IDiLV 157 (422)
T 3s8m_A 133 FSDAARAQVIELIKTEMGGQVDLVV 157 (422)
T ss_dssp TSHHHHHHHHHHHHHHSCSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCCEEE
Confidence 3778887777654332 2455544
No 437
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=33.84 E-value=1.7e+02 Score=26.64 Aligned_cols=82 Identities=11% Similarity=0.014 Sum_probs=45.3
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCCh---hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYP---LYSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-. .....++..+.++..+..|- -|.+.+++.++
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~ 103 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGA----DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNI-----SDPKSVEETIS 103 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTC----EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeec-----CCHHHHHHHHH
Confidence 334677776665555566677777776 7766532222 12233333466666666553 26777777776
Q ss_pred hhhcc-CCceEEEEe
Q psy13922 152 EARKH-CNPRAIVII 165 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~ 165 (509)
...+. .++.++|-+
T Consensus 104 ~~~~~~g~id~li~~ 118 (279)
T 3ctm_A 104 QQEKDFGTIDVFVAN 118 (279)
T ss_dssp HHHHHHSCCSEEEEC
T ss_pred HHHHHhCCCCEEEEC
Confidence 53221 246666643
No 438
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=32.86 E-value=2.7e+02 Score=24.88 Aligned_cols=79 Identities=13% Similarity=0.001 Sum_probs=42.9
Q ss_pred cEEEeCCHHHHHHHHHHHhhc-CCCCCCCeEEEcCCCChhHHHH---HHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIE-DVDGKKPGVLIPIPQYPLYSAS---LAEFNMEQIGYYLDESKQWGLPISELERSITEA 153 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~-~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~ 153 (509)
.+++|.|+...=..+.+.|.+ .|. .|++..-.-...... ++..+.++..+..|- -|.+.+++.++..
T Consensus 6 ~vlITGasggIG~~~a~~L~~~~g~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~ 76 (276)
T 1wma_A 6 VALVTGGNKGIGLAIVRDLCRLFSG----DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDI-----DDLQSIRALRDFL 76 (276)
T ss_dssp EEEESSCSSHHHHHHHHHHHHHSSS----EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHhcCC----eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCC-----CCHHHHHHHHHHH
Confidence 577776665555566777777 676 777665432222222 233355555555542 2677777776643
Q ss_pred hcc-CCceEEEEe
Q psy13922 154 RKH-CNPRAIVII 165 (509)
Q Consensus 154 ~~~-~~~~~ivi~ 165 (509)
.+. .++.+||-+
T Consensus 77 ~~~~g~id~li~~ 89 (276)
T 1wma_A 77 RKEYGGLDVLVNN 89 (276)
T ss_dssp HHHHSSEEEEEEC
T ss_pred HHhcCCCCEEEEC
Confidence 221 245665533
No 439
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=32.77 E-value=2.9e+02 Score=25.22 Aligned_cols=101 Identities=13% Similarity=-0.015 Sum_probs=50.3
Q ss_pred CCcEEEeCCH--HHHHHHHHHHhhcCCCCCCCeEEEcCCCC-hhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 76 WQDVILSAGA--SDGIKSVLKLLIEDVDGKKPGVLIPIPQY-PLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 76 ~~~i~~t~G~--~~al~~~~~~l~~~gd~~~~~Vlv~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
...+++|.|+ +..=..+.+.|.+.|. .|++..-.- ......+...+.++..+..|-. |.+.+++.++.
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~v~~~~~~ 96 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGA----ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVI-----SDQEIKDLFVE 96 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTC----EEEEEECTTCHHHHHHHHGGGCCSEEEECCTT-----CHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCC----EEEEeeCchHHHHHHHHHHhcCCceEEEeecC-----CHHHHHHHHHH
Confidence 3456777654 3244456677777776 777654332 1222223222223444544422 67777777766
Q ss_pred hhcc-CCceEEEEeCCCCCC----CCC---CCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGNPT----GQV---LTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~NPt----G~~---~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.-..+. +.. .+.+++++..+
T Consensus 97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHD 137 (280)
T ss_dssp HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHH
Confidence 4332 356666643222211 111 55666666554
No 440
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=32.65 E-value=4e+02 Score=27.09 Aligned_cols=100 Identities=13% Similarity=0.096 Sum_probs=54.9
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCC------CChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIP------QYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p------~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
.++||.|+...=..+.+.|.+.|. ..|++..- .-......++..|.++..+..|-. |.+.+++.++
T Consensus 241 ~vLITGgsgGIG~alA~~La~~Ga---~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvt-----d~~~v~~~~~ 312 (496)
T 3mje_A 241 SVLVTGGTGGIGGRVARRLAEQGA---AHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAA-----DREALAALLA 312 (496)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTC---SEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHCCC---cEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCC-----CHHHHHHHHH
Confidence 456666655444555666766663 14444321 122334455667889888887743 7899999888
Q ss_pred hhhccCCceEEEEeCCCC-CCC--CCCCHHHHHHHHH
Q psy13922 152 EARKHCNPRAIVIINPGN-PTG--QVLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~~~~~~ivi~~p~N-PtG--~~~s~~~l~~l~~ 185 (509)
......++.+||-+.-.. ..+ ..++.++++++.+
T Consensus 313 ~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~ 349 (496)
T 3mje_A 313 ELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMR 349 (496)
T ss_dssp TCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHH
T ss_pred HHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHH
Confidence 643322345544332211 222 2456666666554
No 441
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=32.05 E-value=1.7e+02 Score=22.26 Aligned_cols=90 Identities=14% Similarity=0.073 Sum_probs=52.4
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCC-CCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDV-DGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~g-d~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
.|+++.++.-+. .+++.|...| . .|++.+..-.. ...+...+...+..+. .+.+.+++.+.
T Consensus 7 ~v~I~G~G~iG~-~~~~~l~~~g~~----~v~~~~r~~~~-~~~~~~~~~~~~~~d~-------~~~~~~~~~~~----- 68 (118)
T 3ic5_A 7 NICVVGAGKIGQ-MIAALLKTSSNY----SVTVADHDLAA-LAVLNRMGVATKQVDA-------KDEAGLAKALG----- 68 (118)
T ss_dssp EEEEECCSHHHH-HHHHHHHHCSSE----EEEEEESCHHH-HHHHHTTTCEEEECCT-------TCHHHHHHHTT-----
T ss_pred eEEEECCCHHHH-HHHHHHHhCCCc----eEEEEeCCHHH-HHHHHhCCCcEEEecC-------CCHHHHHHHHc-----
Confidence 577766655454 3455555555 4 67666654332 2333345666554332 25677777664
Q ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEE
Q psy13922 157 CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLF 195 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI 195 (509)
+..+|+.+.|.. .-..+++.|.+.++..+
T Consensus 69 -~~d~vi~~~~~~---------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 69 -GFDAVISAAPFF---------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp -TCSEEEECSCGG---------GHHHHHHHHHHTTCEEE
T ss_pred -CCCEEEECCCch---------hhHHHHHHHHHhCCCEE
Confidence 477777665422 24678888888888755
No 442
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=31.54 E-value=3e+02 Score=25.01 Aligned_cols=100 Identities=8% Similarity=-0.044 Sum_probs=53.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcC--CEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFN--MEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g--~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-...... ++..| .++..+..|- -|.+.+++.++
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~ 103 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGL----KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL-----SNEEDILSMFS 103 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecC-----CCHHHHHHHHH
Confidence 4577776666555667777777776 777765432222222 22333 4555565553 26777777776
Q ss_pred hhhcc-CCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 152 EARKH-CNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
...+. .++.++|-+....+.+. ..+.+++++..+
T Consensus 104 ~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 140 (279)
T 1xg5_A 104 AIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFN 140 (279)
T ss_dssp HHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 43221 25666664422222222 235566665554
No 443
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=31.42 E-value=3.2e+02 Score=25.39 Aligned_cols=105 Identities=14% Similarity=0.134 Sum_probs=59.6
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC--CCChhHH--HHHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI--PQYPLYS--ASLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~--p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
+....+++|.+.+.....+++.+.+.|. +-+|++.+ |.+.+.. ..+...|.++..+.- ...-..
T Consensus 107 I~~g~~IlT~~~s~Tv~~~l~~a~~~~~--~~~V~v~etrP~~qG~~~a~~L~~~gI~vtli~d----------sa~~~~ 174 (276)
T 1vb5_A 107 IDDGDVIITHSFSSTVLEIIRTAKERKK--RFKVILTESSPDYEGLHLARELEFSGIEFEVITD----------AQMGLF 174 (276)
T ss_dssp CCTTEEEECCSCCHHHHHHHHHHHHTTC--CEEEEEECCTTTTHHHHHHHHHHHTTCCEEEECG----------GGHHHH
T ss_pred ccCCCEEEEeCCChHHHHHHHHHHHcCC--eEEEEEeCCCcchhhHHHHHHHHHCCCCEEEEcH----------HHHHHH
Confidence 3455677765544444456666644332 23677744 7776632 223346888887651 122223
Q ss_pred HHhhhccCCceEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Q psy13922 150 ITEARKHCNPRAIVI-INPGNPTGQVLTKENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 150 i~~~~~~~~~~~ivi-~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~ 196 (509)
+. ++..+++ ..--...|-+.++----.++..|+.+++.+++
T Consensus 175 m~------~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V 216 (276)
T 1vb5_A 175 CR------EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYV 216 (276)
T ss_dssp HT------TCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred Hc------cCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEE
Confidence 32 4777776 33334445555555556778888899887776
No 444
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=31.16 E-value=3e+02 Score=25.36 Aligned_cols=54 Identities=15% Similarity=-0.032 Sum_probs=31.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC-CCChhHHHHHH----hcCCEEEEEecC
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI-PQYPLYSASLA----EFNMEQIGYYLD 134 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~-p~y~~~~~~~~----~~g~~~~~v~~~ 134 (509)
..+++|.|+...=..+.+.|.+.|. .|++.. -.-.......+ ..|.++..+..|
T Consensus 10 k~~lVTGas~GIG~aia~~la~~G~----~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D 68 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLHAEGY----AVCLHYHRSAAEANALSATLNARRPNSAITVQAD 68 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC----eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEee
Confidence 4577776666555667777877776 777765 33232222222 335566666655
No 445
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=30.35 E-value=1.4e+02 Score=28.75 Aligned_cols=47 Identities=19% Similarity=0.060 Sum_probs=36.4
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCccc
Q psy13922 158 NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~ 204 (509)
....|=+.-.+||.|-....+++.++++.|+++|+-|++|--|++..
T Consensus 40 G~N~VRi~~w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~W 86 (332)
T 1hjs_A 40 GVNTVRQRVWVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTW 86 (332)
T ss_dssp TCCEEEEEECSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred CCCEEEEeeeeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCc
Confidence 34444443358888888888999999999999999999997666543
No 446
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=30.02 E-value=3.4e+02 Score=25.22 Aligned_cols=102 Identities=10% Similarity=0.071 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhhhcCCCCCCCcEEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEec
Q psy13922 57 IIRRHVAQYISRRDGQPADWQDVILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYL 133 (509)
Q Consensus 57 ~lr~~va~~l~~~~g~~~~~~~i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 133 (509)
+=|.++.+...+.- .. |++..|+ .+++..+-.+-....| .|++..|.|..
T Consensus 51 ~Er~~v~~~~~~~~----~g--vi~Gvg~~~t~~ai~la~~A~~~Gad----avlv~~P~y~~----------------- 103 (286)
T 2r91_A 51 QEKMELTDAATSAA----RR--VIVQVASLNADEAIALAKYAESRGAE----AVASLPPYYFP----------------- 103 (286)
T ss_dssp HHHHHHHHHHHHHC----SS--EEEECCCSSHHHHHHHHHHHHHTTCS----EEEECCSCSST-----------------
T ss_pred HHHHHHHHHHHHHh----CC--EEEeeCCCCHHHHHHHHHHHHhcCCC----EEEEcCCcCCC-----------------
Confidence 34555555554331 12 7776554 5555544443332334 88888888752
Q ss_pred CCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 134 DESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 134 ~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.++.+.+.+.++...+.....+++-++|.. ||..++.+.+.+ -.|+.=|=|.
T Consensus 104 ------~~s~~~l~~~f~~va~a~~lPiilYn~P~~-tg~~l~~~~~~~------~pnivgiKds 155 (286)
T 2r91_A 104 ------RLSERQIAKYFRDLCSAVSIPVFLYNYPAA-VGRDVDARAAKE------LGCIRGVKDT 155 (286)
T ss_dssp ------TCCHHHHHHHHHHHHHHCSSCEEEEECHHH-HSSCCCHHHHHH------HSCEEEEEEC
T ss_pred ------CCCHHHHHHHHHHHHHhcCCCEEEEeChhh-cCCCCCHHHHHh------cCCEEEEEeC
Confidence 023444544444332222345555565553 688888776666 2465555553
No 447
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=29.94 E-value=3.2e+02 Score=24.82 Aligned_cols=97 Identities=15% Similarity=0.069 Sum_probs=52.9
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHh-cCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAE-FNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-. .++. ...++..+..| --|.+.+++.++...
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~----~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~ 82 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEGH----PLLLLARRVE----RLKALNLPNTLCAQVD-----VTDKYTFDTAITRAE 82 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC----CEEEEESCHH----HHHTTCCTTEEEEECC-----TTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCHH----HHHHhhcCCceEEEec-----CCCHHHHHHHHHHHH
Confidence 34677777776666667778888876 7776543321 1222 22234444444 236777777776533
Q ss_pred cc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-..+.+ ...+.++++++.+
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 116 (266)
T 3p19_A 83 KIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFD 116 (266)
T ss_dssp HHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 22 3566655442222222 2456677776665
No 448
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=29.83 E-value=3.1e+02 Score=24.74 Aligned_cols=95 Identities=8% Similarity=-0.042 Sum_probs=52.4
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-.. ....++..+..|- -|.+.+++.++...+
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~----~V~~~~r~~~~------~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 92 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNY----RVVATSRSIKP------SADPDIHTVAGDI-----SKPETADRIVREGIE 92 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESSCCC------CSSTTEEEEESCT-----TSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCChhh------cccCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34577777766655667778888887 77765432111 1112344444442 267777777765332
Q ss_pred c-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 156 H-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 156 ~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 93 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 125 (260)
T 3un1_A 93 RFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLG 125 (260)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HCCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2 3567666443222222 2456677777655
No 449
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=29.29 E-value=3.2e+02 Score=24.65 Aligned_cols=90 Identities=7% Similarity=-0.006 Sum_probs=48.9
Q ss_pred EEEeCCHHHHHHHHHHHhhcCCCCCCCeE-EEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCH----HHHHHHHHhh
Q psy13922 79 VILSAGASDGIKSVLKLLIEDVDGKKPGV-LIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPI----SELERSITEA 153 (509)
Q Consensus 79 i~~t~G~~~al~~~~~~l~~~gd~~~~~V-lv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~----~~L~~~i~~~ 153 (509)
+++.+|+.+.+..++..+.+..- .-+.+ +++++--......++..|..+..++.... . +- +++.+.++..
T Consensus 26 ~~l~SG~g~~~~~~l~~l~~~~~-~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~---~-~r~~~~~~~~~~l~~~ 100 (229)
T 3auf_A 26 GVLISGSGTNLQAILDGCREGRI-PGRVAVVISDRADAYGLERARRAGVDALHMDPAAY---P-SRTAFDAALAERLQAY 100 (229)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSS-SEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGS---S-SHHHHHHHHHHHHHHT
T ss_pred EEEEeCCcHHHHHHHHHHHhCCC-CCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccc---c-chhhccHHHHHHHHhc
Confidence 34556666677778888765420 00022 33332222345667888998876654321 1 21 3444555554
Q ss_pred hccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 154 RKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 154 ~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
++.+|++... |.+++++-++
T Consensus 101 ----~~Dliv~agy----~~IL~~~~l~ 120 (229)
T 3auf_A 101 ----GVDLVCLAGY----MRLVRGPMLT 120 (229)
T ss_dssp ----TCSEEEESSC----CSCCCHHHHH
T ss_pred ----CCCEEEEcCh----hHhCCHHHHh
Confidence 7888887643 5677754443
No 450
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=28.99 E-value=47 Score=32.75 Aligned_cols=76 Identities=13% Similarity=0.193 Sum_probs=46.0
Q ss_pred HHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 118 SASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 118 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
.+.+...+.++..+.+.++.+|.+....+-+..... .. .....+ .+ ..+.+-.|+++++++|++.|++++|-||--
T Consensus 39 id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~-~~-~~~g~~-~~-~~~~~g~YT~~di~eiv~YA~~rgI~VIPE 114 (367)
T 1yht_A 39 IDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENA-VQ-GKDGIY-IN-PYTGKPFLSYRQLDDIKAYAKAKGIELIPE 114 (367)
T ss_dssp HHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGS-EE-CTTSCE-EC-TTTCCEEBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhh-cc-ccCCCc-CC-CCCCCCCcCHHHHHHHHHHHHHcCCEEEEe
Confidence 345566789999999887767877643221100000 00 000011 11 122345799999999999999999999863
No 451
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=28.59 E-value=44 Score=33.84 Aligned_cols=70 Identities=16% Similarity=0.379 Sum_probs=45.7
Q ss_pred HHHHHhcCCEEEEEecCCCCCCCCCHHHHH--------------HHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 118 SASLAEFNMEQIGYYLDESKQWGLPISELE--------------RSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 118 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~--------------~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
.+.+...+.++..+.+.++ +|.+.++.+. ..+... .. ...++|.|..|+++++++|
T Consensus 31 ID~mA~~KlN~lH~HltDd-gwriei~~~pl~~~g~~~~~~~~~~~~~~g-----~~----~~~~~~~~~~YT~~di~eI 100 (442)
T 2yl5_A 31 VDKASELGYSDVHLLLGND-GLRFLLDDMTITANGKTYASDDVKKAIIEG-----TK----AYYDDPNGTALTQAEVTEL 100 (442)
T ss_dssp HHHHHHHTCCEEEEEEESS-SBCBCCSCCCEEETTEEECHHHHHHHHHHH-----HH----HHCCCTTCSCBCHHHHHHH
T ss_pred HHHHHHhCCcEEEEEEcCC-CcceeccCCcceeceeecccccccccccCC-----cc----ccccCCCCCCcCHHHHHHH
Confidence 3445566888888888666 6776543221 111110 00 0123566789999999999
Q ss_pred HHHHHHCCcEEEEc
Q psy13922 184 IKFAHREKLFLFAD 197 (509)
Q Consensus 184 ~~ia~~~~i~lI~D 197 (509)
++.|++++|-||--
T Consensus 101 v~YA~~rgI~VIPE 114 (442)
T 2yl5_A 101 IEYAKSKDIGLIPA 114 (442)
T ss_dssp HHHHHTTTCEEEEE
T ss_pred HHHHHHcCCeeeee
Confidence 99999999999863
No 452
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=28.45 E-value=1.8e+02 Score=29.39 Aligned_cols=95 Identities=12% Similarity=0.084 Sum_probs=56.1
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHH-HhcCCEEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 74 ADWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASL-AEFNMEQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 74 ~~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
+....|++..|+..+...+ +.|.+.|. .|.+.+|....-...+ ...+.+++.= .++.+.| .
T Consensus 10 l~~~~vlVvGgG~va~~k~-~~L~~~ga----~V~vi~~~~~~~~~~l~~~~~i~~~~~--------~~~~~~l----~- 71 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKA-RLLLEAGA----RLTVNALTFIPQFTVWANEGMLTLVEG--------PFDETLL----D- 71 (457)
T ss_dssp CBTCEEEEECCSHHHHHHH-HHHHHTTB----EEEEEESSCCHHHHHHHTTTSCEEEES--------SCCGGGG----T-
T ss_pred CCCCEEEEECCCHHHHHHH-HHHHhCcC----EEEEEcCCCCHHHHHHHhcCCEEEEEC--------CCCcccc----C-
Confidence 3445788888888888655 56666666 7888777665433333 2234444431 1122222 1
Q ss_pred hhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEE-EEccc
Q psy13922 153 ARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFL-FADEV 199 (509)
Q Consensus 153 ~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~l-I~Dea 199 (509)
...+|+ ..|++| +.=..++..|++.++++ ++|+.
T Consensus 72 -----~~~lVi-~at~~~-------~~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 72 -----SCWLAI-AATDDD-------TVNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp -----TCSEEE-ECCSCH-------HHHHHHHHHHHHTTCEEEETTCT
T ss_pred -----CccEEE-EcCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 244444 456655 33578899999999987 46654
No 453
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=28.30 E-value=1e+02 Score=29.00 Aligned_cols=89 Identities=17% Similarity=0.191 Sum_probs=47.1
Q ss_pred cEEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
.|++..| ..+++..+-.+-....| .|++..|.|. .++-+.+.+.++...
T Consensus 72 pviaGvg~~~t~~ai~la~~a~~~Gad----avlv~~P~y~------------------------~~~~~~l~~~f~~ia 123 (291)
T 3tak_A 72 PIIAGTGANSTREAIELTKAAKDLGAD----AALLVTPYYN------------------------KPTQEGLYQHYKAIA 123 (291)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHHTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHHHHHhcCCC----EEEEcCCCCC------------------------CCCHHHHHHHHHHHH
Confidence 3555444 45555444333332334 7777777764 223445555554433
Q ss_pred ccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 155 KHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 155 ~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
+.....+++-++|. .||..++.+.+.+|+ +-.|+.=|=|.
T Consensus 124 ~a~~lPiilYn~P~-~tg~~l~~~~~~~La---~~pnivgiK~s 163 (291)
T 3tak_A 124 EAVELPLILYNVPG-RTGVDLSNDTAVRLA---EIPNIVGIKDA 163 (291)
T ss_dssp HHCCSCEEEEECHH-HHSCCCCHHHHHHHT---TSTTEEEEEEC
T ss_pred HhcCCCEEEEeccc-ccCCCCCHHHHHHHH---cCCCEEEEEeC
Confidence 22245555556554 368888877666655 23466555553
No 454
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=28.10 E-value=3.8e+02 Score=25.08 Aligned_cols=75 Identities=4% Similarity=0.050 Sum_probs=45.3
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEEec-CCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGYYL-DESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
+.+++..|. |...++.+|.+...+.. .++ -.+++..|.+.++...+ .++++|++..-.++ . .+
T Consensus 184 ~~~v~~H~a---f~Yf~~~yGl~~~~~~~~~~~--~eps~~~l~~l~~~ik~-~~v~~if~e~~~~~-------~---~~ 247 (294)
T 3hh8_A 184 KLIVTSEGC---FKYFSKAYGVPSAYIWEINTE--EEGTPDQISSLIEKLKV-IKPSALFVESSVDR-------R---PM 247 (294)
T ss_dssp CCEEEEESC---CHHHHHHHTCCEEEEESSCCS--CCCCHHHHHHHHHHHHH-SCCSCEEEETTSCS-------H---HH
T ss_pred cEEEEECCh---HHHHHHHcCCceeeccccCCC--CCCCHHHHHHHHHHHHH-cCCCEEEEeCCCCc-------H---HH
Confidence 367776665 45566888998877642 222 25666666665554322 27888888644333 2 23
Q ss_pred HHHHHHCCcEEE
Q psy13922 184 IKFAHREKLFLF 195 (509)
Q Consensus 184 ~~ia~~~~i~lI 195 (509)
-.++++.|+.++
T Consensus 248 ~~ia~~~g~~v~ 259 (294)
T 3hh8_A 248 ETVSKDSGIPIY 259 (294)
T ss_dssp HHHHHHHCCCEE
T ss_pred HHHHHHhCCcEE
Confidence 345678888776
No 455
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=28.04 E-value=3.5e+02 Score=25.59 Aligned_cols=84 Identities=15% Similarity=0.171 Sum_probs=44.0
Q ss_pred EEEeCCH--HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 79 VILSAGA--SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 79 i~~t~G~--~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
|++..|+ .+++..+-.+-....| .|++..|.|. .++.+.+.+.++...+.
T Consensus 84 ViaGvg~st~~ai~la~~A~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~va~a 135 (314)
T 3d0c_A 84 VVAGIGYSVDTAIELGKSAIDSGAD----CVMIHQPVHP------------------------YITDAGAVEYYRNIIEA 135 (314)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCS----EEEECCCCCS------------------------CCCHHHHHHHHHHHHHH
T ss_pred EEecCCcCHHHHHHHHHHHHHcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHHHh
Confidence 6655443 4444433333222334 8888888874 22344454444433222
Q ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 157 CNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 157 ~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
....+++-+ .||. ++.+.+.+|++ -.|+.=|=|.
T Consensus 136 ~~lPiilYn----~tg~-l~~~~~~~La~---~pnIvgiKds 169 (314)
T 3d0c_A 136 LDAPSIIYF----KDAH-LSDDVIKELAP---LDKLVGIKYA 169 (314)
T ss_dssp SSSCEEEEE----CCTT-SCTHHHHHHTT---CTTEEEEEEC
T ss_pred CCCCEEEEe----CCCC-cCHHHHHHHHc---CCCEEEEEeC
Confidence 134444434 7888 88777777653 3455555553
No 456
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=27.86 E-value=3.1e+02 Score=24.03 Aligned_cols=98 Identities=7% Similarity=-0.001 Sum_probs=51.0
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCC--CCCCCeEEEcCCCChhHHHHHHhc-CCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDV--DGKKPGVLIPIPQYPLYSASLAEF-NMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~g--d~~~~~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
.+++|.|+...=..+.+.|.+.| . .|++..-.-...... ... +.++..+..|- -|.+.+++.++...
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~----~V~~~~r~~~~~~~l-~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 74 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIR----HIIATARDVEKATEL-KSIKDSRVHVLPLTV-----TCDKSLDTFVSKVG 74 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCC----EEEEEESSGGGCHHH-HTCCCTTEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCc----EEEEEecCHHHHHHH-HhccCCceEEEEeec-----CCHHHHHHHHHHHH
Confidence 47777666555566777787777 5 777654432222222 222 44555555542 26677777766432
Q ss_pred cc-C--CceEEEEeCCCCC-CC--CCCCHHHHHHHHH
Q psy13922 155 KH-C--NPRAIVIINPGNP-TG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~--~~~~ivi~~p~NP-tG--~~~s~~~l~~l~~ 185 (509)
+. . ++.++|-+.-..+ .+ ...+.+++++..+
T Consensus 75 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (250)
T 1yo6_A 75 EIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLD 111 (250)
T ss_dssp HHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHH
T ss_pred HhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHH
Confidence 21 1 4666664422211 22 2345566665554
No 457
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=27.53 E-value=73 Score=30.08 Aligned_cols=75 Identities=9% Similarity=0.114 Sum_probs=45.8
Q ss_pred CCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC
Q psy13922 112 PQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREK 191 (509)
Q Consensus 112 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~ 191 (509)
|+|..+.++.+....+++-+-..+. .-.+.++++++. ..+++++-.. |. +.++.+++.+.|++++
T Consensus 51 ~vy~sl~el~~~~~~D~viI~tP~~----~~~~~~~ea~~~-----Gi~~iVi~t~----G~--~~~~~~~l~~~A~~~g 115 (288)
T 2nu8_A 51 PVFNTVREAVAATGATASVIYVPAP----FCKDSILEAIDA-----GIKLIITITE----GI--PTLDMLTVKVKLDEAG 115 (288)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCGG----GHHHHHHHHHHT-----TCSEEEECCC----CC--CHHHHHHHHHHHHHHT
T ss_pred eccCCHHHHhhcCCCCEEEEecCHH----HHHHHHHHHHHC-----CCCEEEEECC----CC--CHHHHHHHHHHHHHcC
Confidence 3455566666533444444433222 236677777776 6777665322 33 4577889999999999
Q ss_pred cEEEEcccCC
Q psy13922 192 LFLFADEVYQ 201 (509)
Q Consensus 192 i~lI~Deay~ 201 (509)
+.++-.....
T Consensus 116 v~liGPNc~G 125 (288)
T 2nu8_A 116 VRMIGPNTPG 125 (288)
T ss_dssp CEEECSSCCE
T ss_pred CEEEecCCcc
Confidence 9887665443
No 458
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=27.53 E-value=3.8e+02 Score=25.05 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCcEEEeCCH---HHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEe
Q psy13922 56 EIIRRHVAQYISRRDGQPADWQDVILSAGA---SDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYY 132 (509)
Q Consensus 56 ~~lr~~va~~l~~~~g~~~~~~~i~~t~G~---~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~ 132 (509)
.+=|.++.+...+. +. . |++..|+ .+++..+- ...+.|- +.|++..|.|..
T Consensus 51 ~eEr~~v~~~~~~~----~~-g-viaGvg~~~t~~ai~la~-~A~~~Ga---davlv~~P~y~~---------------- 104 (293)
T 1w3i_A 51 PEEKLENLKAVYDV----TN-K-IIFQVGGLNLDDAIRLAK-LSKDFDI---VGIASYAPYYYP---------------- 104 (293)
T ss_dssp HHHHHHHHHHHHTT----CS-C-EEEECCCSCHHHHHHHHH-HGGGSCC---SEEEEECCCSCS----------------
T ss_pred HHHHHHHHHHHHHH----cC-C-EEEecCCCCHHHHHHHHH-HHHhcCC---CEEEEcCCCCCC----------------
Confidence 34455555555432 11 2 7776554 45554333 3333331 278888888752
Q ss_pred cCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 133 LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 133 ~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
.++.+.+.+.++...+.....+++-++|.. ||..++.+.+.+ -.|+.=|=|.
T Consensus 105 -------~~s~~~l~~~f~~va~a~~lPiilYn~P~~-tg~~l~~~~~~~------~pnIvgiKds 156 (293)
T 1w3i_A 105 -------RMSEKHLVKYFKTLCEVSPHPVYLYNYPTA-TGKDIDAKVAKE------IGCFTGVKDT 156 (293)
T ss_dssp -------SCCHHHHHHHHHHHHHHCSSCEEEEECHHH-HSCCCCHHHHHH------HCCEEEEEEC
T ss_pred -------CCCHHHHHHHHHHHHhhCCCCEEEEECchh-hCcCCCHHHHHh------cCCEEEEEeC
Confidence 023445554444332222344555565553 688888776666 2455555553
No 459
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=27.48 E-value=3.6e+02 Score=25.41 Aligned_cols=54 Identities=15% Similarity=-0.032 Sum_probs=31.0
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcC-CCChhHHHHHH----hcCCEEEEEecC
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPI-PQYPLYSASLA----EFNMEQIGYYLD 134 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~-p~y~~~~~~~~----~~g~~~~~v~~~ 134 (509)
..+++|.|+...=..+.+.|.+.|. .|++.. -.-.......+ ..|.++..+..|
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G~----~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D 105 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEGY----AVCLHYHRSAAEANALSATLNARRPNSAITVQAD 105 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC----EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC----EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEee
Confidence 3577776666555667777877776 777654 33222222222 335566666655
No 460
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=27.48 E-value=3.4e+02 Score=24.32 Aligned_cols=7 Identities=14% Similarity=0.264 Sum_probs=4.9
Q ss_pred CcEEEEc
Q psy13922 191 KLFLFAD 197 (509)
Q Consensus 191 ~i~lI~D 197 (509)
++.+.+|
T Consensus 173 ~~~I~v~ 179 (230)
T 1tqj_A 173 DPWIEVD 179 (230)
T ss_dssp CCEEEEE
T ss_pred CCcEEEE
Confidence 6777776
No 461
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=27.39 E-value=2.2e+02 Score=27.72 Aligned_cols=16 Identities=19% Similarity=0.198 Sum_probs=7.4
Q ss_pred HHhhcCeEEecCCCCC
Q psy13922 401 LLERTGICIVPGAGFG 416 (509)
Q Consensus 401 ll~~~gI~v~pg~~f~ 416 (509)
+..+.||....|.+|.
T Consensus 293 ~~~~~~~~~k~g~w~~ 308 (366)
T 1xp8_A 293 LAADMDIIKKAGSFYS 308 (366)
T ss_dssp HHHHTTSSEEETTEEE
T ss_pred HHHHhCeeeccCceee
Confidence 3334455555554443
No 462
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=27.27 E-value=3.7e+02 Score=24.73 Aligned_cols=143 Identities=10% Similarity=0.109 Sum_probs=85.3
Q ss_pred CCCCCHHHHHHHHHHHhcc------cCCCcccCCCCcchHHHHHHHHHHHhhhcCCCCCCCcEEEeCCHHHHHHHHHHHh
Q psy13922 23 DPRFPDDVKQRAQAVLDGC------RGQSVGSYTDSPGIEIIRRHVAQYISRRDGQPADWQDVILSAGASDGIKSVLKLL 96 (509)
Q Consensus 23 ~~~~p~~v~~a~~~~l~~~------~~~~~~~Y~~~~g~~~lr~~va~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 96 (509)
+|.+++...+.+.+..... .+++..=|+ . ..+++.+.-+. ..+|.+.+|+|-. + .+
T Consensus 20 dkglg~~~~~d~Le~~g~yID~lKfg~Gt~~l~~--~--~~l~eki~l~~---------~~gV~v~~GGTl~-E----~~ 81 (251)
T 1qwg_A 20 DKGLPPKFVEDYLKVCGDYIDFVKFGWGTSAVID--R--DVVKEKINYYK---------DWGIKVYPGGTLF-E----YA 81 (251)
T ss_dssp ESSCCHHHHHHHHHHHGGGCSEEEECTTGGGGSC--H--HHHHHHHHHHH---------TTTCEEEECHHHH-H----HH
T ss_pred cCCCCHHHHHHHHHHhhhhcceEEecCceeeecC--H--HHHHHHHHHHH---------HcCCeEECCcHHH-H----HH
Confidence 4567776666665555542 222222122 1 33666666554 3468899999722 2 22
Q ss_pred hcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCC-CCCCC
Q psy13922 97 IEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNP-TGQVL 175 (509)
Q Consensus 97 ~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NP-tG~~~ 175 (509)
...+ .+..|...++..|++.+++.- +...++.+...+.|+...+. .-+++.=..--+| .+...
T Consensus 82 ~~qg------------~~~~yl~~~k~lGf~~iEiS~---G~i~l~~~~~~~~I~~~~~~-G~~v~~EvG~k~~~~~~~~ 145 (251)
T 1qwg_A 82 YSKG------------KFDEFLNECEKLGFEAVEISD---GSSDISLEERNNAIKRAKDN-GFMVLTEVGKKMPDKDKQL 145 (251)
T ss_dssp HHTT------------CHHHHHHHHHHHTCCEEEECC---SSSCCCHHHHHHHHHHHHHT-TCEEEEEECCSSHHHHTTC
T ss_pred HHcC------------cHHHHHHHHHHcCCCEEEECC---CcccCCHHHHHHHHHHHHHC-CCEEeeeccccCCcccCCC
Confidence 2222 678899999999999999853 34477888888888765321 2444332222333 23467
Q ss_pred CHHHHHHHHHHHHHCCcEEEEccc
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEV 199 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Dea 199 (509)
+++++-+.++-+-+.|+..|+=|+
T Consensus 146 ~~~~~I~~~~~~LeAGA~~ViiEa 169 (251)
T 1qwg_A 146 TIDDRIKLINFDLDAGADYVIIEG 169 (251)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CHHHHHHHHHHHHHCCCcEEEEee
Confidence 777887777777777876665555
No 463
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=26.98 E-value=4e+02 Score=25.10 Aligned_cols=76 Identities=12% Similarity=0.025 Sum_probs=46.4
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDII 184 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~ 184 (509)
+.+++.-+. |...++.+|.+.+.+... +..-.+++..|.+.++...+ .++++|+...-.+| .-.+.
T Consensus 191 ~~~v~~H~a---f~Yfa~~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~-~~v~~If~e~~~~~-------~~~~~-- 256 (312)
T 2o1e_A 191 KEFITQHTA---FGYLAKEYGLKQVPIAGL-SPDQEPSAASLAKLKTYAKE-HNVKVIYFEEIASS-------KVADT-- 256 (312)
T ss_dssp CEEEESSCT---THHHHHHTTCEEEECSSC-CSSSCCCHHHHHHHHHHTTS-SCCCEEECSSCCCH-------HHHHH--
T ss_pred CEEEEECCc---hHHHHHHCCCeEEEeecc-CCCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCCCh-------HHHHH--
Confidence 367776554 566778899998776321 11236778888877765422 26777775432222 23333
Q ss_pred HHHHHCCcEEE
Q psy13922 185 KFAHREKLFLF 195 (509)
Q Consensus 185 ~ia~~~~i~lI 195 (509)
++++.|+.++
T Consensus 257 -ia~e~g~~v~ 266 (312)
T 2o1e_A 257 -LASEIGAKTE 266 (312)
T ss_dssp -HHHHTCCEEE
T ss_pred -HHHHhCCcEE
Confidence 4678888875
No 464
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=26.75 E-value=1.9e+02 Score=27.02 Aligned_cols=79 Identities=6% Similarity=-0.031 Sum_probs=50.7
Q ss_pred ChhHHHHHHhcCCEEEEEecCCCC-CCCCCHHHHHHHHHhhhccCCceEEEEeCCC---CCCCC-------------CCC
Q psy13922 114 YPLYSASLAEFNMEQIGYYLDESK-QWGLPISELERSITEARKHCNPRAIVIINPG---NPTGQ-------------VLT 176 (509)
Q Consensus 114 y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~---NPtG~-------------~~s 176 (509)
+......++.+|++-+.+...+.+ .+..+++++.+.+++. ..+++.+..+. |...- --.
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~----GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 106 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDA----GLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKI 106 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHT----TCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHH
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHc----CCeEEEEecccccccccCcccccccccchhhHHHH
Confidence 344556677889998888643221 2355789999999885 67776665443 22110 011
Q ss_pred HHHHHHHHHHHHHCCcEEEE
Q psy13922 177 KENIQDIIKFAHREKLFLFA 196 (509)
Q Consensus 177 ~~~l~~l~~ia~~~~i~lI~ 196 (509)
.+.+++.+++|++.|+..|+
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~ 126 (303)
T 3l23_A 107 MEYWKATAADHAKLGCKYLI 126 (303)
T ss_dssp HHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEE
Confidence 45678889999999877665
No 465
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=26.60 E-value=2e+02 Score=27.25 Aligned_cols=89 Identities=19% Similarity=0.300 Sum_probs=47.7
Q ss_pred cEEEeCC---HHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 78 DVILSAG---ASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 78 ~i~~t~G---~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
-|++..| ..+++..+-.+-....| .|++..|.|. .++.+.+.+.++...
T Consensus 86 pviaGvg~~~t~~ai~la~~a~~~Gad----avlv~~P~y~------------------------~~s~~~l~~~f~~va 137 (304)
T 3l21_A 86 RVIAGAGTYDTAHSIRLAKACAAEGAH----GLLVVTPYYS------------------------KPPQRGLQAHFTAVA 137 (304)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHHTCS----EEEEECCCSS------------------------CCCHHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCC----EEEECCCCCC------------------------CCCHHHHHHHHHHHH
Confidence 3555443 34555444333332334 7777777764 234556666555543
Q ss_pred ccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 155 KHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 155 ~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
+.....+++-++|.. ||..++.+.+.+|+ +-.|+.=|=|.
T Consensus 138 ~a~~lPiilYn~P~~-tg~~l~~~~~~~La---~~pnIvgiKds 177 (304)
T 3l21_A 138 DATELPMLLYDIPGR-SAVPIEPDTIRALA---SHPNIVGVXDA 177 (304)
T ss_dssp TSCSSCEEEEECHHH-HSSCCCHHHHHHHH---TSTTEEEEEEC
T ss_pred HhcCCCEEEEeCccc-cCCCCCHHHHHHHh---cCCCEEEEECC
Confidence 332444555455543 58888877666665 33466555553
No 466
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=26.00 E-value=42 Score=33.92 Aligned_cols=70 Identities=14% Similarity=0.321 Sum_probs=44.7
Q ss_pred HHHHHhcCCEEEEEecCCCCCCCCCHHH--------------HHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHH
Q psy13922 118 SASLAEFNMEQIGYYLDESKQWGLPISE--------------LERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDI 183 (509)
Q Consensus 118 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~--------------L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l 183 (509)
.+.+...+.++..+.+.++ +|++.++. +...+... .. ..-++|.|..|+++++++|
T Consensus 28 ID~mA~~KlN~lH~HLtDd-gwr~ei~~~pl~~~~~~~~~~~~~~~~~~g-----~~----~~~~~~~~~~YT~~di~eI 97 (434)
T 2yl6_A 28 IDKAKHYGYTDLHLLVGND-GLRFMLDDMSITANGKTYASDDVKRAIEKG-----TN----DYYNDPNGNHLTESQMTDL 97 (434)
T ss_dssp HHHHHHHTCCEEEEEEESS-SBCEECSCCCEEETTEEECHHHHHHHHHHH-----HH----HHCCCTTCSCEEHHHHHHH
T ss_pred HHHHHHhcCCeEEEEecCC-CcccccCCCceeeeeeccccccchhhhhcC-----Cc----cccCCCCCCccCHHHHHHH
Confidence 3445566888888887655 66553221 11222211 00 0123456789999999999
Q ss_pred HHHHHHCCcEEEEc
Q psy13922 184 IKFAHREKLFLFAD 197 (509)
Q Consensus 184 ~~ia~~~~i~lI~D 197 (509)
++.|++++|-||--
T Consensus 98 v~YA~~rgI~VIPE 111 (434)
T 2yl6_A 98 INYAKDKGIGLIPT 111 (434)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHHcCCEEEEe
Confidence 99999999999863
No 467
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=25.76 E-value=3.4e+02 Score=23.88 Aligned_cols=94 Identities=13% Similarity=0.061 Sum_probs=47.2
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccC
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHC 157 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~ 157 (509)
.+++|.|+...=..+.+.|.+.|. .|++..-.-.. ..+..|...+..++.+ -+++.+.+.+.+.. .
T Consensus 4 ~vlVTGas~giG~~~a~~l~~~G~----~V~~~~r~~~~---~~~~~~~~~~~~D~~~-----~~~~~~~~~~~~~~--g 69 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALVARGY----RVAIASRNPEE---AAQSLGAVPLPTDLEK-----DDPKGLVKRALEAL--G 69 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC----EEEEEESSCHH---HHHHHTCEEEECCTTT-----SCHHHHHHHHHHHH--T
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCCHHH---HHHhhCcEEEecCCch-----HHHHHHHHHHHHHc--C
Confidence 477777776666677777887776 77765443332 2233354444433321 13333333222211 2
Q ss_pred CceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 158 NPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
++.+++-+.-....+ ...+.+++++..+
T Consensus 70 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 99 (239)
T 2ekp_A 70 GLHVLVHAAAVNVRKPALELSYEEWRRVLY 99 (239)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 466665432222212 2456677777665
No 468
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=25.44 E-value=3.8e+02 Score=24.26 Aligned_cols=101 Identities=10% Similarity=0.085 Sum_probs=53.9
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-.......+... .+..+..|- -|.+.+++.++...
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~ 77 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGA----RVVICDKDESGGRALEQELP-GAVFILCDV-----TQEDDVKTLVSETI 77 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHCT-TEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHhc-CCeEEEcCC-----CCHHHHHHHHHHHH
Confidence 334678887776666677778888877 77776543222333333332 134444442 26777777776532
Q ss_pred cc-CCceEEEEeCCCC-CCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGN-PTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~N-PtG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-.. +.+ ...+.+++++..+
T Consensus 78 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (270)
T 1yde_A 78 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLE 112 (270)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 22 3566665432211 112 1345666766555
No 469
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=25.06 E-value=92 Score=29.54 Aligned_cols=76 Identities=13% Similarity=0.250 Sum_probs=45.6
Q ss_pred CCChhHHHHHHhcC-CEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC
Q psy13922 112 PQYPLYSASLAEFN-MEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE 190 (509)
Q Consensus 112 p~y~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~ 190 (509)
|+|....++.+..+ .++.-+-..+. .-.+.++++++. .++.+++.+. |. +.++.++|.+.|+++
T Consensus 57 ~vy~sl~el~~~~~~~DvaIi~vp~~----~~~~~v~ea~~~-----Gi~~vVi~t~----G~--~~~~~~~l~~~A~~~ 121 (297)
T 2yv2_A 57 PVYDSVKEALAEHPEINTSIVFVPAP----FAPDAVYEAVDA-----GIRLVVVITE----GI--PVHDTMRFVNYARQK 121 (297)
T ss_dssp EEESSHHHHHHHCTTCCEEEECCCGG----GHHHHHHHHHHT-----TCSEEEECCC----CC--CHHHHHHHHHHHHHH
T ss_pred eeeCCHHHHhhcCCCCCEEEEecCHH----HHHHHHHHHHHC-----CCCEEEEECC----CC--CHHHHHHHHHHHHHc
Confidence 44555555555323 44443322222 135667777776 6886665322 32 557789999999999
Q ss_pred CcEEEEcccCCc
Q psy13922 191 KLFLFADEVYQD 202 (509)
Q Consensus 191 ~i~lI~Deay~~ 202 (509)
++.++-......
T Consensus 122 gi~viGPNc~Gi 133 (297)
T 2yv2_A 122 GATIIGPNCPGA 133 (297)
T ss_dssp TCEEECSSSCEE
T ss_pred CCEEEcCCCCee
Confidence 998887665443
No 470
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=24.63 E-value=3.7e+02 Score=23.82 Aligned_cols=88 Identities=10% Similarity=0.062 Sum_probs=48.6
Q ss_pred EEeCCHHHHHHHHHHHhhcCCCCCCCeE--EEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCH----HHHHHHHHhh
Q psy13922 80 ILSAGASDGIKSVLKLLIEDVDGKKPGV--LIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPI----SELERSITEA 153 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~~~gd~~~~~V--lv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~----~~L~~~i~~~ 153 (509)
++.+|+.+.+..++..+.+..- .-.| +++++--......++..|..+..++.... . +. +++.+.++..
T Consensus 8 vl~sG~g~~~~~~l~~l~~~~l--~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~---~-~~~~~~~~~~~~l~~~ 81 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKRGDL--PARVALLVCDRPGAKVIERAARENVPAFVFSPKDY---P-SKAAFESEILRELKGR 81 (212)
T ss_dssp EECCSSCHHHHHHHHHHHTTCC--CEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGS---S-SHHHHHHHHHHHHHHT
T ss_pred EEEECCcHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccc---c-chhhhHHHHHHHHHhc
Confidence 4556665667777777765420 0022 34443333456677888988876654321 1 22 2344555554
Q ss_pred hccCCceEEEEeCCCCCCCCCCCHHHHH
Q psy13922 154 RKHCNPRAIVIINPGNPTGQVLTKENIQ 181 (509)
Q Consensus 154 ~~~~~~~~ivi~~p~NPtG~~~s~~~l~ 181 (509)
++.+|++... |.+++++-++
T Consensus 82 ----~~Dliv~a~y----~~il~~~~l~ 101 (212)
T 3av3_A 82 ----QIDWIALAGY----MRLIGPTLLS 101 (212)
T ss_dssp ----TCCEEEESSC----CSCCCHHHHH
T ss_pred ----CCCEEEEchh----hhhCCHHHHh
Confidence 7888887643 5677754443
No 471
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=24.35 E-value=3.9e+02 Score=23.95 Aligned_cols=82 Identities=10% Similarity=0.043 Sum_probs=42.4
Q ss_pred CCCcEEEeCCH--HHHHHHHHHHhhcCCCCCCCeEEEcCCCCh---hHHHHHHhcCC-EEEEEecCCCCCCCCCHHHHHH
Q psy13922 75 DWQDVILSAGA--SDGIKSVLKLLIEDVDGKKPGVLIPIPQYP---LYSASLAEFNM-EQIGYYLDESKQWGLPISELER 148 (509)
Q Consensus 75 ~~~~i~~t~G~--~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~---~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~L~~ 148 (509)
....+++|.|+ +..=..+.+.|.+.|. .|++..-.-. ......+..+. ++..+..|-. |.+.+++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~ 76 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA----RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-----NDAEIET 76 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC----EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-----SSHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC----EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-----CHHHHHH
Confidence 34467777766 3344566777777776 7776543321 12223333333 4555555422 5566666
Q ss_pred HHHhhhcc-CCceEEEEe
Q psy13922 149 SITEARKH-CNPRAIVII 165 (509)
Q Consensus 149 ~i~~~~~~-~~~~~ivi~ 165 (509)
.++...+. .++..++-+
T Consensus 77 ~~~~~~~~~g~id~li~~ 94 (266)
T 3oig_A 77 CFASIKEQVGVIHGIAHC 94 (266)
T ss_dssp HHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHhCCeeEEEEc
Confidence 66543221 245655543
No 472
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=24.25 E-value=2e+02 Score=27.59 Aligned_cols=47 Identities=15% Similarity=0.048 Sum_probs=36.0
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccCCccc
Q psy13922 158 NPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADEVYQDNV 204 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~Deay~~~~ 204 (509)
....|=+--..||.+-..+.+.+.++++.|++.|+-+++|--|++..
T Consensus 40 G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~w 86 (334)
T 1fob_A 40 GINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTW 86 (334)
T ss_dssp TCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred CCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCCC
Confidence 34443332247888888899999999999999999999997666543
No 473
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=24.00 E-value=50 Score=33.32 Aligned_cols=29 Identities=7% Similarity=0.282 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHHCCcEEEEcccCCccc
Q psy13922 176 TKENIQDIIKFAHREKLFLFADEVYQDNV 204 (509)
Q Consensus 176 s~~~l~~l~~ia~~~~i~lI~Deay~~~~ 204 (509)
+++++++|++-|++.||-||.|-|+-+..
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 45999999999999999999999987754
No 474
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=23.92 E-value=5e+02 Score=26.16 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=52.3
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC------hhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY------PLYSASLAEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y------~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
.+++|.|+...=..+.+.|.+.|. .+|++..-.- ......++..|.++..+..|-. |.+.+++.++
T Consensus 228 ~vLITGgtGgIG~~la~~La~~G~---~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~-----d~~~v~~~~~ 299 (486)
T 2fr1_A 228 TVLVTGGTGGVGGQIARWLARRGA---PHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVT-----DRESVRELLG 299 (486)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTC---SEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHcCC---CEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCC-----CHHHHHHHHH
Confidence 466665554444455566666664 1355442221 1222334556888887776633 7888888887
Q ss_pred hhhccCCceEEEEeCCCCCCCC--CCCHHHHHHHHH
Q psy13922 152 EARKHCNPRAIVIINPGNPTGQ--VLTKENIQDIIK 185 (509)
Q Consensus 152 ~~~~~~~~~~ivi~~p~NPtG~--~~s~~~l~~l~~ 185 (509)
......++.+||-+.-....+. .++.+++++..+
T Consensus 300 ~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~ 335 (486)
T 2fr1_A 300 GIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASR 335 (486)
T ss_dssp TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTH
T ss_pred HHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHH
Confidence 6422224455553322222222 345566655543
No 475
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=23.68 E-value=5.4e+02 Score=25.45 Aligned_cols=76 Identities=8% Similarity=0.017 Sum_probs=42.1
Q ss_pred cEEEeCCHHHHHHH---HHHHhhcCCCCCCCeEEEcCCCC---------------hhHHHHHHhcCCEEEEEecCCCCCC
Q psy13922 78 DVILSAGASDGIKS---VLKLLIEDVDGKKPGVLIPIPQY---------------PLYSASLAEFNMEQIGYYLDESKQW 139 (509)
Q Consensus 78 ~i~~t~G~~~al~~---~~~~l~~~gd~~~~~Vlv~~p~y---------------~~~~~~~~~~g~~~~~v~~~~~~~~ 139 (509)
.+++|.|++ +|-. +...+.+.|. .|++..-.- ......++..|.++..+..|-.
T Consensus 62 ~aLVTGass-GIG~A~aia~ala~~Ga----~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt--- 133 (418)
T 4eue_A 62 KVLIVGASS-GFGLATRISVAFGGPEA----HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF--- 133 (418)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHSSSCC----EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT---
T ss_pred EEEEECCCc-HHHHHHHHHHHHHhCCC----EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC---
Confidence 456665554 5544 4455666565 765532110 1223344566888887777633
Q ss_pred CCCHHHHHHHHHhhhcc-CCceEEE
Q psy13922 140 GLPISELERSITEARKH-CNPRAIV 163 (509)
Q Consensus 140 ~~d~~~L~~~i~~~~~~-~~~~~iv 163 (509)
|.+.+++.++...+. .++.++|
T Consensus 134 --d~~~v~~~v~~i~~~~G~IDiLV 156 (418)
T 4eue_A 134 --SNETKDKVIKYIKDEFGKIDLFV 156 (418)
T ss_dssp --CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred --CHHHHHHHHHHHHHHcCCCCEEE
Confidence 677777777664433 3455554
No 476
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=23.65 E-value=69 Score=30.38 Aligned_cols=76 Identities=9% Similarity=0.153 Sum_probs=45.0
Q ss_pred CCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC
Q psy13922 112 PQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREK 191 (509)
Q Consensus 112 p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~ 191 (509)
|+|....++.+....+++-+-..+. .-.+.++++++. .++.+++.+ +|. +.++.++|.+.|++++
T Consensus 57 ~vy~sl~el~~~~~~Dv~ii~vp~~----~~~~~v~ea~~~-----Gi~~vVi~t----~G~--~~~~~~~l~~~A~~~g 121 (294)
T 2yv1_A 57 PVFDTVKEAVKETDANASVIFVPAP----FAKDAVFEAIDA-----GIELIVVIT----EHI--PVHDTMEFVNYAEDVG 121 (294)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCHH----HHHHHHHHHHHT-----TCSEEEECC----SCC--CHHHHHHHHHHHHHHT
T ss_pred eeeCCHHHHhhcCCCCEEEEccCHH----HHHHHHHHHHHC-----CCCEEEEEC----CCC--CHHHHHHHHHHHHHcC
Confidence 3455556665533444443322221 125666666665 688666532 233 5577899999999999
Q ss_pred cEEEEcccCCc
Q psy13922 192 LFLFADEVYQD 202 (509)
Q Consensus 192 i~lI~Deay~~ 202 (509)
+.++-......
T Consensus 122 i~viGPNc~Gi 132 (294)
T 2yv1_A 122 VKIIGPNTPGI 132 (294)
T ss_dssp CEEECSSCCEE
T ss_pred CEEEcCCCcee
Confidence 98887765443
No 477
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=23.62 E-value=4.2e+02 Score=24.09 Aligned_cols=100 Identities=9% Similarity=-0.000 Sum_probs=52.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHH---HHhcCC-EEEEEecCCCCCCCCCHHHHHHHHHh
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSAS---LAEFNM-EQIGYYLDESKQWGLPISELERSITE 152 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~---~~~~g~-~~~~v~~~~~~~~~~d~~~L~~~i~~ 152 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-...... +...|. ++..+..|-. |.+.+++.++.
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~ 99 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGA----HVVVTARSKETLQKVVSHCLELGAASAHYIAGTME-----DMTFAEQFVAQ 99 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTT-----CHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCC-----CHHHHHHHHHH
Confidence 3577777665555566677777776 777765443333222 222343 5666665532 66777776664
Q ss_pred hhcc-CCceEEEEeCCCC-CCC-CCCCHHHHHHHHH
Q psy13922 153 ARKH-CNPRAIVIINPGN-PTG-QVLTKENIQDIIK 185 (509)
Q Consensus 153 ~~~~-~~~~~ivi~~p~N-PtG-~~~s~~~l~~l~~ 185 (509)
..+. .++.++|-+.... +.+ ...+.+++++..+
T Consensus 100 ~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~ 135 (286)
T 1xu9_A 100 AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME 135 (286)
T ss_dssp HHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHH
Confidence 3221 2566666441221 111 1235566666554
No 478
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=23.38 E-value=4.2e+02 Score=23.99 Aligned_cols=95 Identities=14% Similarity=0.034 Sum_probs=49.6
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhh
Q psy13922 75 DWQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEAR 154 (509)
Q Consensus 75 ~~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~ 154 (509)
....+++|.|+...=..+.+.|.+.|. .|++..-.-... ...... +..| --|.+.+++.++...
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~----~V~~~~r~~~~~-----~~~~~~--~~~D-----v~~~~~v~~~~~~~~ 76 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGA----KVVSVSLDEKSD-----VNVSDH--FKID-----VTNEEEVKEAVEKTT 76 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC----EEEEEESCC--C-----TTSSEE--EECC-----TTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC----EEEEEeCCchhc-----cCceeE--EEec-----CCCHHHHHHHHHHHH
Confidence 334677777776655667777888887 777654221111 112233 3333 226777777776533
Q ss_pred cc-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 155 KH-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 155 ~~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
+. .++.++|-+.-..+.+ ...+.+++++..+
T Consensus 77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 77 KKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 22 3566666442222222 2356677766554
No 479
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=23.29 E-value=1.3e+02 Score=20.05 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=21.3
Q ss_pred eEEEEee-cChHHHHHHHHHHHHHHHH
Q psy13922 478 HFRTTIL-PQPEKLKAMLEKFREFHEE 503 (509)
Q Consensus 478 ~~Rls~~-~~~~~i~~~~~~l~~~~~~ 503 (509)
.+|+|+. .+..+-++....|.+++.+
T Consensus 3 rvrisitartkkeaekfaailikvfae 29 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAE 29 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHH
Confidence 7999998 7888888888877777765
No 480
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=23.29 E-value=3.2e+02 Score=23.62 Aligned_cols=72 Identities=8% Similarity=-0.062 Sum_probs=39.6
Q ss_pred cEEEeCCHHHHHHHHHHHhh-cCCCCCCCeEEEcCCCCh-hHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 78 DVILSAGASDGIKSVLKLLI-EDVDGKKPGVLIPIPQYP-LYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~-~~gd~~~~~Vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
.|++|.++...=..+.+.|. +.|. .|++..-.-. ...... ..+..+..+..| -.|.+.+++.++.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~----~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----~~d~~~~~~~~~~--- 73 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDM----HITLYGRQLKTRIPPEI-IDHERVTVIEGS-----FQNPGXLEQAVTN--- 73 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCC----EEEEEESSHHHHSCHHH-HTSTTEEEEECC-----TTCHHHHHHHHTT---
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCc----eEEEEecCccccchhhc-cCCCceEEEECC-----CCCHHHHHHHHcC---
Confidence 47887765555556667777 6776 7776543322 111111 123344444444 2377888888763
Q ss_pred cCCceEEEEe
Q psy13922 156 HCNPRAIVII 165 (509)
Q Consensus 156 ~~~~~~ivi~ 165 (509)
+.++|.+
T Consensus 74 ---~d~vv~~ 80 (221)
T 3r6d_A 74 ---AEVVFVG 80 (221)
T ss_dssp ---CSEEEES
T ss_pred ---CCEEEEc
Confidence 6776644
No 481
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=22.91 E-value=4.1e+02 Score=23.78 Aligned_cols=77 Identities=9% Similarity=0.025 Sum_probs=38.4
Q ss_pred CcEEEeCCH--HHHHHHHHHHhhcCCCCCCCeEEEcCCCCh--hHHHHH-HhcCCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 77 QDVILSAGA--SDGIKSVLKLLIEDVDGKKPGVLIPIPQYP--LYSASL-AEFNMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 77 ~~i~~t~G~--~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~--~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
..+++|.|+ ...=..+.+.|.+.|. .|++..-.-. .....+ ...+.. ..+..| --|.+.+++.++
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~l~~~~~~~-~~~~~D-----~~~~~~v~~~~~ 79 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGA----ELAFTYQNDKLKGRVEEFAAQLGSD-IVLQCD-----VAEDASIDTMFA 79 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTC----EEEEEESSTTTHHHHHHHHHHTTCC-CEEECC-----TTCHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCC----EEEEEcCcHHHHHHHHHHHHhcCCc-EEEEcc-----CCCHHHHHHHHH
Confidence 357777665 3444456667777776 7776532221 111222 222322 334443 226777877776
Q ss_pred hhhcc-CCceEEE
Q psy13922 152 EARKH-CNPRAIV 163 (509)
Q Consensus 152 ~~~~~-~~~~~iv 163 (509)
...+. .++.++|
T Consensus 80 ~~~~~~g~iD~lv 92 (265)
T 1qsg_A 80 ELGKVWPKFDGFV 92 (265)
T ss_dssp HHHTTCSSEEEEE
T ss_pred HHHHHcCCCCEEE
Confidence 54332 2455554
No 482
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=22.77 E-value=4.6e+02 Score=24.24 Aligned_cols=75 Identities=9% Similarity=0.056 Sum_probs=43.0
Q ss_pred eEEEcCCCChhHHHHHHhcCCEEEEEec-CCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy13922 106 GVLIPIPQYPLYSASLAEFNMEQIGYYL-DESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDII 184 (509)
Q Consensus 106 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~ 184 (509)
.+++.-+. |...++.+|.+.+.+.. .++ -.+++..|.+.++...+ .++++|+...-.+| .-.+.
T Consensus 179 ~~v~~H~a---f~Yf~~~yGl~~~~~~~~~~~--~eps~~~l~~l~~~ik~-~~v~~if~e~~~~~-------~~~~~-- 243 (284)
T 3cx3_A 179 TFVTQHTA---FSYLAKRFGLNQLGIAGISPE--QEPSPRQLTEIQEFVKT-YKVKTIFTESNASS-------KVAET-- 243 (284)
T ss_dssp CEEEEESC---CHHHHHHTTCCEEEEECSSTT--CCCCSHHHHHHHHHHHH-TTCCCEEECSSSCC-------HHHHH--
T ss_pred EEEEECCc---hHHHHHHcCCEEeeccCCCCC--CCCCHHHHHHHHHHHHH-cCCCEEEEeCCCCc-------HHHHH--
Confidence 67777665 45567888998887652 222 24555555555443221 17888776533333 22333
Q ss_pred HHHHHCCcEEEE
Q psy13922 185 KFAHREKLFLFA 196 (509)
Q Consensus 185 ~ia~~~~i~lI~ 196 (509)
++++.|+.++.
T Consensus 244 -ia~~~g~~v~~ 254 (284)
T 3cx3_A 244 -LVKSTGVGLKT 254 (284)
T ss_dssp -HHSSSSCCEEE
T ss_pred -HHHHcCCeEEE
Confidence 46677877653
No 483
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=22.73 E-value=3.8e+02 Score=25.90 Aligned_cols=107 Identities=13% Similarity=0.074 Sum_probs=59.4
Q ss_pred CCCCcEEEeCCHHH---------HHHHHHHHhhcCCCCCCCeEEEcC--CCChhHH---HHHHhcCCEEEEEecCCCCCC
Q psy13922 74 ADWQDVILSAGASD---------GIKSVLKLLIEDVDGKKPGVLIPI--PQYPLYS---ASLAEFNMEQIGYYLDESKQW 139 (509)
Q Consensus 74 ~~~~~i~~t~G~~~---------al~~~~~~l~~~gd~~~~~Vlv~~--p~y~~~~---~~~~~~g~~~~~v~~~~~~~~ 139 (509)
+....+++|.+-+. ++ .+++...+.|. +-+|++.+ |.+.+.. .-+...|.++..++-
T Consensus 146 I~~g~~ILThcns~~lat~~~gtvl-~~l~~A~~~gk--~~~V~v~EtRP~~qG~rlta~eL~~~GI~vtlI~D------ 216 (347)
T 1t9k_A 146 IKDGSTILTHCNAGALATVDYGTAL-GVIRAAVESGK--RIRVFADETRPYLQGARLTAWELMKDGIEVYVITD------ 216 (347)
T ss_dssp SCTTEEEEECSCCSGGGSSSSCSHH-HHHHHHHHTTC--CEEEEEECCTTTTHHHHTHHHHHHTTTCEEEEECG------
T ss_pred hCCCCEEEEecCCCccccCCccHHH-HHHHHHHHCCC--eEEEEEeCCCCccccHHHHHHHHHhCCCCEEEEeh------
Confidence 34557888865443 33 34444444442 33677764 7776643 345566888877651
Q ss_pred CCCHHHHHHHHHhhhccCCceEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 140 GLPISELERSITEARKHCNPRAIVII-NPGNPTGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 140 ~~d~~~L~~~i~~~~~~~~~~~ivi~-~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
...-..+.+. .+..|++- .---..|.+.++----.++-+|+.||+++++=
T Consensus 217 ----sa~~~~M~~~----~Vd~VivGAd~V~aNG~v~NKiGT~~lAl~Ak~~~vPfyV~ 267 (347)
T 1t9k_A 217 ----NMAGWLMKRG----LIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIPFYVA 267 (347)
T ss_dssp ----GGHHHHHHTT----CCSEEEECCSEEETTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred ----hHHHHHhhcC----CCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEe
Confidence 2333344442 47777662 22222244444333456777889999988874
No 484
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=22.66 E-value=4.1e+02 Score=23.68 Aligned_cols=88 Identities=10% Similarity=0.112 Sum_probs=50.3
Q ss_pred EEeCCHHHHHHHHHHHhhcCCCCCCCeEE-Ec-CCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccC
Q psy13922 80 ILSAGASDGIKSVLKLLIEDVDGKKPGVL-IP-IPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHC 157 (509)
Q Consensus 80 ~~t~G~~~al~~~~~~l~~~gd~~~~~Vl-v~-~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~ 157 (509)
++.+|+-..+..++..+...+- .-+.++ ++ .|.-. -...++..|..+..++... +.-+++.+.+++.
T Consensus 13 vl~SG~gsnl~all~~~~~~~~-~~~I~~Vis~~~~a~-~l~~A~~~gIp~~~~~~~~-----~~~~~~~~~L~~~---- 81 (215)
T 3kcq_A 13 VLISGRGSNLEALAKAFSTEES-SVVISCVISNNAEAR-GLLIAQSYGIPTFVVKRKP-----LDIEHISTVLREH---- 81 (215)
T ss_dssp EEESSCCHHHHHHHHHTCCC-C-SEEEEEEEESCTTCT-HHHHHHHTTCCEEECCBTT-----BCHHHHHHHHHHT----
T ss_pred EEEECCcHHHHHHHHHHHcCCC-CcEEEEEEeCCcchH-HHHHHHHcCCCEEEeCccc-----CChHHHHHHHHHh----
Confidence 4456666677778877754321 001222 23 23322 3456788898888765432 1236676777775
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHH
Q psy13922 158 NPRAIVIINPGNPTGQVLTKENIQD 182 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~~~s~~~l~~ 182 (509)
++.+|++... |.+++++-++.
T Consensus 82 ~~Dlivlagy----~~IL~~~~l~~ 102 (215)
T 3kcq_A 82 DVDLVCLAGF----MSILPEKFVTD 102 (215)
T ss_dssp TCSEEEESSC----CSCCCHHHHHH
T ss_pred CCCEEEEeCC----ceEeCHHHHhh
Confidence 7888887643 56777544443
No 485
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=22.34 E-value=2.8e+02 Score=29.35 Aligned_cols=111 Identities=13% Similarity=-0.010 Sum_probs=62.0
Q ss_pred CCCCCCcEEEeCCHHHHHHHHHHHhhc---CCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHH
Q psy13922 72 QPADWQDVILSAGASDGIKSVLKLLIE---DVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELER 148 (509)
Q Consensus 72 ~~~~~~~i~~t~G~~~al~~~~~~l~~---~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~ 148 (509)
..++.+.|.+++++..++...+++|.+ .++ ....|...|.|. .+-+-+++ ..+--++++.+.+
T Consensus 41 L~i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~--~~~~I~D~P~f~----------~RG~mlD~--sR~~f~~~~~ik~ 106 (627)
T 2epl_X 41 VEGRQGYYQVSYKQPHQLYRALALLSAALRSGQ--DEVQIEEEAAYE----------DLAYMADC--SRNAVLNLSSAKK 106 (627)
T ss_dssp EEEETTEEEEEESSTTHHHHHHHHHHHHHHTTC--SSEEEEECCSCS----------EEEEEEEC--SSSCCBCHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHhhcCC--CceEEEeCCCCC----------ccceEEec--CCCCCCCHHHHHH
Confidence 335566788876665555555555432 221 125666677764 22233332 2210346777777
Q ss_pred HHHhhhccCCceEE--EEe----CCCCC----CCCCCCHHHHHHHHHHHHHCCcEEEEc
Q psy13922 149 SITEARKHCNPRAI--VII----NPGNP----TGQVLTKENIQDIIKFAHREKLFLFAD 197 (509)
Q Consensus 149 ~i~~~~~~~~~~~i--vi~----~p~NP----tG~~~s~~~l~~l~~ia~~~~i~lI~D 197 (509)
.|+..... +.-.+ .++ .+..| .|-.|+++++++|++.|++++|-||--
T Consensus 107 ~id~ma~~-KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VIPE 164 (627)
T 2epl_X 107 MIEVLALM-GYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFVPC 164 (627)
T ss_dssp HHHHHHHH-TCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHc-CCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEEEe
Confidence 66643221 11111 221 12223 356899999999999999999999853
No 486
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=21.96 E-value=2.8e+02 Score=28.71 Aligned_cols=74 Identities=14% Similarity=0.058 Sum_probs=49.4
Q ss_pred CeEEEcCCCChhH-------HHHHHhcCCEEEEEe---cCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCC
Q psy13922 105 PGVLIPIPQYPLY-------SASLAEFNMEQIGYY---LDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQV 174 (509)
Q Consensus 105 ~~Vlv~~p~y~~~-------~~~~~~~g~~~~~v~---~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~ 174 (509)
+.|++.....++. ...+...|++++... +.-++ .-|-++|...++.. +|+-++..+- -.
T Consensus 340 ~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~Sg--Ha~~~eL~~~i~~~----~Pk~vipvHG-----e~ 408 (562)
T 3bk2_A 340 DTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASG--HASQEELKLILNLT----TPRFFLPWHG-----EV 408 (562)
T ss_dssp CEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCS--SCCHHHHHHHHHHH----CCSEEEEESB-----CH
T ss_pred CEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeC--CCCHHHHHHHHHhc----CCCEEEEEcC-----CH
Confidence 3999988766654 333456799887542 11121 56899999999887 7888876642 11
Q ss_pred CCHHHHHHHHHHHHHCCc
Q psy13922 175 LTKENIQDIIKFAHREKL 192 (509)
Q Consensus 175 ~s~~~l~~l~~ia~~~~i 192 (509)
..+..+++++++.|+
T Consensus 409 ---~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 409 ---RHQMNFKWLAESMSR 423 (562)
T ss_dssp ---HHHHHHHHHHHTSSS
T ss_pred ---HHHHHHHHHHHHcCC
Confidence 457778888887664
No 487
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=21.91 E-value=4.2e+02 Score=23.51 Aligned_cols=94 Identities=12% Similarity=0.024 Sum_probs=50.3
Q ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 76 WQDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 76 ~~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
...+++|.|+...=..+.+.|.+.|. .|++..-.-. .+..+... +..| --|.+.+++.++...+
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~----~V~~~~r~~~-----~~~~~~~~--~~~D-----~~d~~~~~~~~~~~~~ 70 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGA----KVTGFDQAFT-----QEQYPFAT--EVMD-----VADAAQVAQVCQRLLA 70 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC----EEEEEESCCC-----SSCCSSEE--EECC-----TTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC----EEEEEeCchh-----hhcCCceE--EEcC-----CCCHHHHHHHHHHHHH
Confidence 34577777766555667777887776 7776432211 01224333 3333 2267777777765332
Q ss_pred c-CCceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 156 H-CNPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 156 ~-~~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
. .++.++|-+.-..+.+ ..++.+++++..+
T Consensus 71 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 2fwm_X 71 ETERLDALVNAAGILRMGATDQLSKEDWQQTFA 103 (250)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2 2566666432222222 2356677777665
No 488
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=21.81 E-value=1.8e+02 Score=27.56 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=0.0
Q ss_pred ecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC---CcEEEE
Q psy13922 132 YLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE---KLFLFA 196 (509)
Q Consensus 132 ~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~---~i~lI~ 196 (509)
|.++++ .+|.+.+++.++...+. .+..|+++ -++=-+..++.+|..++++.+.+. ++.||.
T Consensus 25 Pf~~dg--~iD~~~l~~lv~~li~~-Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 25 PFTATA--EVDYGKLEENLHKLGTF-PFRGFVVQ-GSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCTTS--CBCHHHHHHHHHHHTTS-CCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred cCCCCC--CcCHHHHHHHHHHHHHc-CCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
No 489
>2iyg_A APPA, antirepressor of PPSR, sensor of blue light; signal transduction; HET: FMN; 2.3A {Rhodobacter sphaeroides} PDB: 2iyi_A*
Probab=21.49 E-value=2.8e+02 Score=22.51 Aligned_cols=86 Identities=9% Similarity=0.070 Sum_probs=52.9
Q ss_pred CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC-------CcEEEEcccCCcccccCCCccccHHHHHHHhCCCCCCcee
Q psy13922 158 NPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE-------KLFLFADEVYQDNVYAEGSKFYSFKKVLVEMGEPYKSMEL 230 (509)
Q Consensus 158 ~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~-------~i~lI~Deay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 230 (509)
-..++|++...-+. +.+++..|+.-++++ |+++..+..|.-. .+| +...+..+...+..+..+.++
T Consensus 16 L~~LiY~S~a~~~~----~~~~l~~Il~~ar~~N~~~gITG~Ll~~~g~F~Q~-LEG--~~~~V~~Ly~rI~~D~RH~~v 88 (124)
T 2iyg_A 16 LVSCSYRSLAAPDL----TLRDLLDIVETSQAHNARAQLTGALFYSQGVFFQW-LEG--RPAAVAEVMTHIQRDRRHSNV 88 (124)
T ss_dssp CEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHHTCEEEEEEETTEEEEE-EEE--CHHHHHHHHHHHHHCTTEEEE
T ss_pred eEEEEEEEeecCCC----CHHHHHHHHHHHHHhhhhcCCEEEEEEcCCEEEEE-eeC--CHHHHHHHHHHHhcCCCcCCe
Confidence 45778887654443 889999999999886 4666666544332 333 344555555555444444444
Q ss_pred --EEEEecccccCCCCCCeeEEEe
Q psy13922 231 --ASFMSCSKGYMGECGLRGGYSE 252 (509)
Q Consensus 231 --i~i~S~SK~~~G~~Glr~G~v~ 252 (509)
+......+-.. ++|..|++-
T Consensus 89 ~~L~~~~i~~R~F--~~WsM~~~~ 110 (124)
T 2iyg_A 89 EILAEEPIAKRRF--AGWHMQLSC 110 (124)
T ss_dssp EEEEEEECSSCSS--TTCSSEEEC
T ss_pred EEEEeeecccCcc--CCCcccccc
Confidence 44444455543 789999984
No 490
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=21.19 E-value=3.1e+02 Score=24.72 Aligned_cols=78 Identities=10% Similarity=0.002 Sum_probs=42.9
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhc-----CCEEEEEecCCCCCCCCCHHHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEF-----NMEQIGYYLDESKQWGLPISELERSIT 151 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~-----g~~~~~v~~~~~~~~~~d~~~L~~~i~ 151 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-.......... +.++..+..|- -|.+.++++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 78 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGA----KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV-----ADQQQLRDTFR 78 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCT-----TSHHHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC----EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCC-----CCHHHHHHHHH
Confidence 3577777666555667777887777 7776543322222222211 33455555542 26777777776
Q ss_pred hhhcc-CCceEEE
Q psy13922 152 EARKH-CNPRAIV 163 (509)
Q Consensus 152 ~~~~~-~~~~~iv 163 (509)
...+. .++.++|
T Consensus 79 ~~~~~~g~id~lv 91 (267)
T 2gdz_A 79 KVVDHFGRLDILV 91 (267)
T ss_dssp HHHHHHSCCCEEE
T ss_pred HHHHHcCCCCEEE
Confidence 53221 2456655
No 491
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=21.10 E-value=3.5e+02 Score=26.33 Aligned_cols=69 Identities=16% Similarity=0.049 Sum_probs=40.0
Q ss_pred HhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcc
Q psy13922 122 AEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREKLFLFADE 198 (509)
Q Consensus 122 ~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~i~lI~De 198 (509)
+..|+.-+-+-.... +.++.+.+.+.++...+. ..+++-++|.. ||..++.+.+.+|++ -.|+.=|=|.
T Consensus 151 ~~~Gadavlvv~PyY--~k~sq~gl~~hf~~IA~a--~PiilYNiP~r-Tg~~ls~e~l~~La~---~pnIvGIKds 219 (360)
T 4dpp_A 151 FAVGMHAALHINPYY--GKTSIEGLIAHFQSVLHM--GPTIIYNVPGR-TGQDIPPRAIFKLSQ---NPNLAGVKEC 219 (360)
T ss_dssp HHTTCSEEEEECCCS--SCCCHHHHHHHHHTTGGG--SCEEEEECHHH-HSCCCCHHHHHHHTT---STTEEEEEEC
T ss_pred HHcCCCEEEEcCCCC--CCCCHHHHHHHHHHHHHh--CCEEEEeCCcc-cCCCCCHHHHHHHhc---CCCEEEEEeC
Confidence 344655443322211 255778888777765432 34555465544 799999877777653 4566666664
No 492
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.08 E-value=1.8e+02 Score=27.37 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=40.3
Q ss_pred CCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC---CcEEEE
Q psy13922 139 WGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHRE---KLFLFA 196 (509)
Q Consensus 139 ~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~---~i~lI~ 196 (509)
..+|.+.+++.++...+. .+..|+++ -++=-+..++.+|..++++.+.+. ++.||.
T Consensus 23 g~iD~~~l~~lv~~li~~-Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIEN-GTDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp SCBCHHHHHHHHHHHHHT-TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCcCHHHHHHHHHHHHHc-CCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 489999999988764332 67777754 233334689999999999988763 567766
No 493
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=20.97 E-value=1.9e+02 Score=25.12 Aligned_cols=68 Identities=13% Similarity=0.093 Sum_probs=37.0
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCC-HHHHHHHHHhhhcc
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLP-ISELERSITEARKH 156 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d-~~~L~~~i~~~~~~ 156 (509)
.|++|.|+...=..+++.|.+.|. .|++..-.-..... ..+.+++..++ .| .+.++++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~---~~~~~~~~~D~-------~d~~~~~~~~~~----- 62 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY----QIYAGARKVEQVPQ---YNNVKAVHFDV-------DWTPEEMAKQLH----- 62 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC----EEEEEESSGGGSCC---CTTEEEEECCT-------TSCHHHHHTTTT-----
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC----EEEEEECCccchhh---cCCceEEEecc-------cCCHHHHHHHHc-----
Confidence 377777665555667777777776 77665422111100 03444443322 25 677777665
Q ss_pred CCceEEEEe
Q psy13922 157 CNPRAIVII 165 (509)
Q Consensus 157 ~~~~~ivi~ 165 (509)
++.+||-+
T Consensus 63 -~~d~vi~~ 70 (219)
T 3dqp_A 63 -GMDAIINV 70 (219)
T ss_dssp -TCSEEEEC
T ss_pred -CCCEEEEC
Confidence 37777754
No 494
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=20.95 E-value=2.7e+02 Score=27.01 Aligned_cols=83 Identities=13% Similarity=0.074 Sum_probs=43.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhcc
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKH 156 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~ 156 (509)
..|+..+++-.+..++..+- ..|- +..|+++.-.-..-...++.+|++++.++-+ |. +.....+.+.+.
T Consensus 94 ~~vv~aSsGN~g~alA~aa~-~~G~--~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~----~~-~a~~~a~~l~~~--- 162 (364)
T 4h27_A 94 AHFVCSSSGNAGMAAAYAAR-QLGV--PATIVVPGTTPALTIERLKNEGATVKVVGEL----LD-EAFELAKALAKN--- 162 (364)
T ss_dssp CEEEECCSSHHHHHHHHHHH-HHTC--CEEEEEETTSCHHHHHHHHTTTCEEEEECSS----TT-HHHHHHHHHHHH---
T ss_pred CEEEEeCCChHHHHHHHHHH-HhCC--ceEEEECCCCCHHHHHHHHHcCCEEEEECCC----HH-HHHHHHHHHHHh---
Confidence 35555555555554444332 2232 2256666654445667788899999888632 11 222222223331
Q ss_pred CCceEEEEeCCCCCC
Q psy13922 157 CNPRAIVIINPGNPT 171 (509)
Q Consensus 157 ~~~~~ivi~~p~NPt 171 (509)
.+...+++..+||.
T Consensus 163 -~~~~~~~~~~~np~ 176 (364)
T 4h27_A 163 -NPGWVYIPPFDDPL 176 (364)
T ss_dssp -STTEEEECSSCSHH
T ss_pred -CCCeEEeCCCCCHH
Confidence 34667776556663
No 495
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=20.83 E-value=4.8e+02 Score=26.05 Aligned_cols=97 Identities=6% Similarity=-0.002 Sum_probs=50.5
Q ss_pred cEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCC--ChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhc
Q psy13922 78 DVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQ--YPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARK 155 (509)
Q Consensus 78 ~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~--y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~ 155 (509)
.+++|.|+...=..+.+.|.+.|. +|++..-. -..........+...+.+++. |.+.+++.++...+
T Consensus 215 ~~LVTGgsgGIG~aiA~~La~~Ga----~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvt-------d~~~v~~~~~~~~~ 283 (454)
T 3u0b_A 215 VAVVTGAARGIGATIAEVFARDGA----TVVAIDVDGAAEDLKRVADKVGGTALTLDVT-------ADDAVDKITAHVTE 283 (454)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTC----EEEEEECGGGHHHHHHHHHHHTCEEEECCTT-------STTHHHHHHHHHHH
T ss_pred EEEEeCCchHHHHHHHHHHHHCCC----EEEEEeCCccHHHHHHHHHHcCCeEEEEecC-------CHHHHHHHHHHHHH
Confidence 456666555444566677777776 77665321 122334445557666554433 44555555554322
Q ss_pred c-C-CceEEEEeCCCCCCC--CCCCHHHHHHHHH
Q psy13922 156 H-C-NPRAIVIINPGNPTG--QVLTKENIQDIIK 185 (509)
Q Consensus 156 ~-~-~~~~ivi~~p~NPtG--~~~s~~~l~~l~~ 185 (509)
. . ++.++|-+.-....+ ..++.+++++..+
T Consensus 284 ~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~ 317 (454)
T 3u0b_A 284 HHGGKVDILVNNAGITRDKLLANMDEKRWDAVIA 317 (454)
T ss_dssp HSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCceEEEECCcccCCCccccCCHHHHHHHHH
Confidence 2 1 366666442222222 2456677776655
No 496
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=20.76 E-value=3.6e+02 Score=24.66 Aligned_cols=96 Identities=8% Similarity=0.029 Sum_probs=51.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCC----hhHHH---HHHhcCCEEEEEecCCCCCCCCCHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQY----PLYSA---SLAEFNMEQIGYYLDESKQWGLPISELERS 149 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y----~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~ 149 (509)
..|++|.++-..=..+++.|.+.|. .|.+..-.- ..-.. .+...|++++..++ -|.+.+.++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~-------~d~~~l~~~ 73 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGH----PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL-------DDHQRLVDA 73 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTC----CEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCS-------SCHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCC----cEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCC-------CCHHHHHHH
Confidence 3588886643333455666666665 555543221 11111 12334666654332 267888888
Q ss_pred HHhhhccCCceEEEEeCC-CCCCCCCCCHHHHHHHHHHHHHCC-c
Q psy13922 150 ITEARKHCNPRAIVIINP-GNPTGQVLTKENIQDIIKFAHREK-L 192 (509)
Q Consensus 150 i~~~~~~~~~~~ivi~~p-~NPtG~~~s~~~l~~l~~ia~~~~-i 192 (509)
++. +.+|+.+.. .++.... ..-..+++.|++.+ +
T Consensus 74 ~~~------~d~vi~~a~~~~~~~~~---~~~~~l~~aa~~~g~v 109 (313)
T 1qyd_A 74 LKQ------VDVVISALAGGVLSHHI---LEQLKLVEAIKEAGNI 109 (313)
T ss_dssp HTT------CSEEEECCCCSSSSTTT---TTHHHHHHHHHHSCCC
T ss_pred HhC------CCEEEECCccccchhhH---HHHHHHHHHHHhcCCC
Confidence 764 667665422 2111112 23577888888887 5
No 497
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=20.75 E-value=5.1e+02 Score=24.01 Aligned_cols=77 Identities=14% Similarity=0.092 Sum_probs=44.7
Q ss_pred CeEEEcCCCChhHHHHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHH
Q psy13922 105 PGVLIPIPQYPLYSASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDII 184 (509)
Q Consensus 105 ~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~ 184 (509)
+.+++.-|. |...++.+|.+.+.+... +..-.+++..|.+.++...+ .++++|+...-.++ .-.+
T Consensus 180 ~~~v~~H~a---f~Yf~~~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~-~~v~~if~e~~~~~-------~~~~--- 244 (286)
T 3gi1_A 180 KTFVTQHTA---FSYLAKRFGLKQLGISGI-SPEQEPSPRQLKEIQDFVKE-YNVKTIFAEDNVNP-------KIAH--- 244 (286)
T ss_dssp CEEEEEESC---CHHHHHHTTCEEEEEECS-CC---CCHHHHHHHHHHHHH-TTCCEEEECTTSCT-------HHHH---
T ss_pred CEEEEECCc---hHHHHHHCCCeEeecccc-CCCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCCCh-------HHHH---
Confidence 377776655 556678899998876532 11125566666665543322 17888887533333 2233
Q ss_pred HHHHHCCcEEEE
Q psy13922 185 KFAHREKLFLFA 196 (509)
Q Consensus 185 ~ia~~~~i~lI~ 196 (509)
.++++.|+.++.
T Consensus 245 ~la~~~g~~v~~ 256 (286)
T 3gi1_A 245 AIAKSTGAKVKT 256 (286)
T ss_dssp HHHHTTTCEEEE
T ss_pred HHHHHhCCeEEE
Confidence 457788988764
No 498
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=20.75 E-value=4.8e+02 Score=24.10 Aligned_cols=12 Identities=17% Similarity=0.221 Sum_probs=5.3
Q ss_pred HHHHHhcCCEEE
Q psy13922 118 SASLAEFNMEQI 129 (509)
Q Consensus 118 ~~~~~~~g~~~~ 129 (509)
...++..|.+.+
T Consensus 141 ~~~~~~~gl~~i 152 (267)
T 3vnd_A 141 SKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHcCCeEE
Confidence 334444454444
No 499
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=20.69 E-value=4.6e+02 Score=23.82 Aligned_cols=80 Identities=10% Similarity=-0.013 Sum_probs=42.6
Q ss_pred CcEEEeCCHHHHHHHHHHHhhcCCCCCCCeEEEcCCCChhHHHHHH---hc-CCEEEEEecCCCCCCCCCH-HHHHHHHH
Q psy13922 77 QDVILSAGASDGIKSVLKLLIEDVDGKKPGVLIPIPQYPLYSASLA---EF-NMEQIGYYLDESKQWGLPI-SELERSIT 151 (509)
Q Consensus 77 ~~i~~t~G~~~al~~~~~~l~~~gd~~~~~Vlv~~p~y~~~~~~~~---~~-g~~~~~v~~~~~~~~~~d~-~~L~~~i~ 151 (509)
..+++|.|+...=..+.+.|.+.|. .|++..-.-......++ .. +.++..+..|-. |. +.+++.++
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~----~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~~v~~~~~ 83 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGI----MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVT-----DPIATMSSLAD 83 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTT-----SCHHHHHHHHH
T ss_pred cEEEEecCCchHHHHHHHHHHHCCC----EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCC-----CcHHHHHHHHH
Confidence 3567776665555566777777777 88877644333333322 22 335666655532 44 55555544
Q ss_pred hhhcc-CCceEEEEe
Q psy13922 152 EARKH-CNPRAIVII 165 (509)
Q Consensus 152 ~~~~~-~~~~~ivi~ 165 (509)
...+. .++.++|-+
T Consensus 84 ~~~~~~g~iD~lv~n 98 (311)
T 3o26_A 84 FIKTHFGKLDILVNN 98 (311)
T ss_dssp HHHHHHSSCCEEEEC
T ss_pred HHHHhCCCCCEEEEC
Confidence 32221 256666533
No 500
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=20.68 E-value=2.8e+02 Score=23.33 Aligned_cols=58 Identities=7% Similarity=-0.012 Sum_probs=41.0
Q ss_pred HHHHhcCCEEEEEecCCCCCCCCCHHHHHHHHHhhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC
Q psy13922 119 ASLAEFNMEQIGYYLDESKQWGLPISELERSITEARKHCNPRAIVIINPGNPTGQVLTKENIQDIIKFAHREK 191 (509)
Q Consensus 119 ~~~~~~g~~~~~v~~~~~~~~~~d~~~L~~~i~~~~~~~~~~~ivi~~p~NPtG~~~s~~~l~~l~~ia~~~~ 191 (509)
..++..|.+++.... ..+++.+.+.+.+. ++.+|.++.-.. ...+.+.++++.+++.+
T Consensus 40 ~~l~~~G~eVi~lG~------~~p~e~lv~aa~~~----~~diV~lS~~~~-----~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 40 RALRDAGFEVVYTGL------RQTPEQVAMAAVQE----DVDVIGVSILNG-----AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp HHHHHTTCEEECCCS------BCCHHHHHHHHHHT----TCSEEEEEESSS-----CHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCEEEECCC------CCCHHHHHHHHHhc----CCCEEEEEeech-----hhHHHHHHHHHHHHhcC
Confidence 456778999986543 34688888888775 888888874433 23467888888888754
Done!