Query psy13940
Match_columns 88
No_of_seqs 114 out of 731
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 15:31:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13940.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13940hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dko_A Caspase-3; low barrier 100.0 3.6E-32 1.2E-36 181.7 7.3 81 1-88 53-133 (146)
2 1qtn_A Caspase-8; apoptosis, d 100.0 9.4E-32 3.2E-36 182.6 8.0 81 1-88 67-148 (164)
3 3p45_A Caspase-6; protease, hu 100.0 1.1E-31 3.7E-36 184.8 7.9 81 1-88 81-161 (179)
4 2ql9_A Caspase-7; cysteine pro 100.0 2.1E-31 7.1E-36 182.5 6.7 81 1-88 81-161 (173)
5 1pyo_A Caspase-2; apoptosis, c 100.0 7.4E-31 2.5E-35 178.6 7.4 81 1-88 70-152 (167)
6 3h11_B Caspase-8; cell death, 99.9 2.5E-28 8.5E-33 176.1 8.0 81 1-88 61-142 (271)
7 3od5_A Caspase-6; caspase doma 99.9 3.1E-28 1.1E-32 176.2 7.9 81 1-88 58-138 (278)
8 3h11_A CAsp8 and FADD-like apo 99.9 1.1E-28 3.8E-33 178.4 5.4 81 1-88 66-150 (272)
9 1nw9_B Caspase 9, apoptosis-re 99.9 8.3E-28 2.9E-32 173.3 7.6 81 1-88 58-146 (277)
10 3sir_A Caspase; hydrolase; 2.6 99.9 7.6E-28 2.6E-32 172.6 6.0 81 1-88 56-136 (259)
11 4ehd_A Caspase-3; caspase, apo 99.9 1.5E-27 5.2E-32 172.7 7.3 81 1-88 81-161 (277)
12 2j32_A Caspase-3; Pro-caspase3 99.9 3.1E-27 1.1E-31 168.5 7.3 81 1-88 53-133 (250)
13 1m72_A Caspase-1; caspase, cys 99.9 4.3E-27 1.5E-31 169.8 7.3 81 1-88 68-148 (272)
14 2h54_A Caspase-1; allosteric s 99.9 7E-27 2.4E-31 160.3 7.5 81 1-88 77-164 (178)
15 2fp3_A Caspase NC; apoptosis, 99.9 4.7E-27 1.6E-31 172.7 6.6 81 1-88 96-182 (316)
16 2nn3_C Caspase-1; cysteine pro 99.9 1.2E-26 4.1E-31 170.4 6.7 81 1-88 96-176 (310)
17 3e4c_A Caspase-1; zymogen, inf 99.9 6.8E-26 2.3E-30 165.7 6.6 81 1-88 94-181 (302)
18 1f1j_A Caspase-7 protease; cas 99.9 6.2E-26 2.1E-30 166.2 6.0 81 1-88 106-186 (305)
19 3uoa_B Mucosa-associated lymph 99.1 8.8E-11 3E-15 88.5 5.0 76 1-88 39-125 (390)
20 3bij_A Uncharacterized protein 95.0 0.085 2.9E-06 37.3 6.8 78 1-87 43-132 (285)
21 4f6o_A Metacaspase-1; rossmann 72.8 7.2 0.00025 28.7 5.3 33 17-50 109-141 (350)
22 4af8_A Metacaspase MCA2; hydro 63.0 7.3 0.00025 28.8 3.7 53 16-69 148-215 (367)
23 3acd_A Hypoxanthine-guanine ph 41.8 33 0.0011 22.5 3.9 34 16-49 13-49 (181)
24 1t3y_A Coactosin-like protein; 40.3 65 0.0022 20.0 5.3 66 17-88 4-79 (141)
25 3uws_A Hypothetical protein; c 38.2 62 0.0021 20.0 4.6 29 19-49 86-114 (126)
26 3tla_A MCCF; serine protease, 34.1 15 0.00052 27.0 1.3 11 1-11 73-83 (371)
27 4h1h_A LMO1638 protein; MCCF-l 33.4 13 0.00046 26.5 0.9 12 1-12 42-53 (327)
28 1v6f_A MGMF-beta, GLIA maturat 31.6 96 0.0033 19.3 6.0 55 20-76 18-73 (151)
29 1hqz_1 ABP1P, actin-binding pr 29.9 97 0.0033 18.9 8.0 65 19-87 12-84 (141)
30 4e5s_A MCCFLIKE protein (BA_56 25.1 1.1E+02 0.0037 21.8 4.6 11 1-11 42-52 (331)
31 2kvk_A Actin severing and dyna 22.8 1.4E+02 0.0048 18.4 5.2 52 20-76 10-63 (144)
32 1wxa_A Afadin, AF-6 protein; R 22.6 73 0.0025 19.4 2.8 51 17-68 35-95 (116)
33 2eo2_A Adult MALE hypothalamus 20.7 69 0.0024 18.3 2.2 17 10-26 43-59 (71)
34 2lj8_A Cofilin/actin depolymer 20.7 1.6E+02 0.0054 18.1 5.7 50 20-75 18-69 (144)
35 1s3a_A NADH-ubiquinone oxidore 20.3 60 0.0021 19.1 2.1 17 15-31 83-99 (102)
36 1ak6_A Destrin; actin depolyme 20.3 1E+02 0.0035 19.8 3.3 31 52-82 142-173 (174)
No 1
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=99.97 E-value=3.6e-32 Score=181.67 Aligned_cols=81 Identities=32% Similarity=0.593 Sum_probs=78.0
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCccccCCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRTLAG 80 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~L~g 80 (88)
+||+|.+|+|.| ++||.+.|+++++++|+.+|||+|+|||||. +|.|||+|+++++++|+++|++++||+|+|
T Consensus 53 LgF~V~~~~dlt------~~em~~~l~~~~~~dh~~~dc~vv~ilSHG~-~g~i~g~D~~~~l~~i~~~F~~~~CpsL~g 125 (146)
T 2dko_A 53 LKYEVRNKNDLT------REEIVELMRDVSKEDHSKRSSFVCVLLSHGE-EGIIFGTNGPVDLKKITNFFRGDRCRSLTG 125 (146)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHHSCCTTEEEEEEEEESCEE-TTEEEETTEEEEHHHHHHTTSTTTCGGGTT
T ss_pred CCCEEEEeeCCC------HHHHHHHHHHHHHhhcCCCCeEEEEeccCCC-CCEEEEeCCcEeHHHHHHHhccccChhhcC
Confidence 699999999966 5899999999999999999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEeC
Q psy13940 81 KPKIFFIQ 88 (88)
Q Consensus 81 KPKlffiQ 88 (88)
||||||||
T Consensus 126 KPKlffiQ 133 (146)
T 2dko_A 126 KPKLFIIQ 133 (146)
T ss_dssp SCEEEEEE
T ss_pred CCeEEEEE
Confidence 99999998
No 2
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=99.97 E-value=9.4e-32 Score=182.57 Aligned_cols=81 Identities=33% Similarity=0.578 Sum_probs=77.7
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCc-cchHhhhhccCcCccccCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMP-YFVEKLWLPFTADKCRTLA 79 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~-v~~~~I~~~f~~~~c~~L~ 79 (88)
+||+|.+|+|.| ++||.+.|+++++++|..+|||+|+|||||. +|.|||+|+. +++++|+++|++.+||+|+
T Consensus 67 LgF~V~~~~dlt------~~em~~~l~~~~~~dh~~~dc~vv~ilSHG~-~g~i~g~D~~~v~i~~i~~~F~~~~CpsL~ 139 (164)
T 1qtn_A 67 LHFEIKPHDDCT------VEQIYEILKIYQLMDHSNMDCFICCILSHGD-KGIIYGTDGQEAPIYELTSQFTGLKCPSLA 139 (164)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHHSCCTTCSCEEEEEESCEE-TTEEECTTSCEEEHHHHHGGGSTTTCGGGT
T ss_pred CCCEEEEecCCC------HHHHHHHHHHHHHhhccCCCEEEEEeCCCCC-CCEEEeeCCCEeeHHHHHHHhccccChhhc
Confidence 699999999966 5899999999999999999999999999999 9999999997 9999999999999999999
Q ss_pred CCCeEEEeC
Q psy13940 80 GKPKIFFIQ 88 (88)
Q Consensus 80 gKPKlffiQ 88 (88)
|||||||||
T Consensus 140 gKPKlFfiQ 148 (164)
T 1qtn_A 140 GKPKVFFIQ 148 (164)
T ss_dssp TSCEEEEEE
T ss_pred CCCeEEEEE
Confidence 999999998
No 3
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=184.76 Aligned_cols=81 Identities=38% Similarity=0.619 Sum_probs=77.9
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCccccCCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRTLAG 80 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~L~g 80 (88)
+||+|.+|+|+| ++||.+.|+++++++|..+|||+|+|||||. +|.|||+|+.|++++|+++|++.+||+|+|
T Consensus 81 LGF~V~~~~dlt------~~em~~~l~~~~~~dh~~~dc~vvvilSHG~-~g~I~g~D~~v~l~~I~~~F~~~~CpsL~g 153 (179)
T 3p45_A 81 LGFEVKCFNDLK------AEELLLKIHEVSTVSHADADCFVCVFLSHGE-GNHIYAYDAKIEIQTLTGLFKGDKCHSLVG 153 (179)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHTSCCTTBSCEEEEEESCEE-TTEEECSSSEEEHHHHHGGGSGGGCGGGTT
T ss_pred CCCEEEEEeCCC------HHHHHHHHHHHhhhhcCCCCEEEEEEeccCC-CCEEEEECCEEEHHHHHHhcccccChhhCC
Confidence 599999999955 5899999999999999999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEeC
Q psy13940 81 KPKIFFIQ 88 (88)
Q Consensus 81 KPKlffiQ 88 (88)
||||||||
T Consensus 154 KPKlFfIQ 161 (179)
T 3p45_A 154 KPKIFIIQ 161 (179)
T ss_dssp SCEEEEEE
T ss_pred CCcEEEEE
Confidence 99999998
No 4
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=99.97 E-value=2.1e-31 Score=182.45 Aligned_cols=81 Identities=35% Similarity=0.602 Sum_probs=77.7
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCccccCCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRTLAG 80 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~L~g 80 (88)
+||+|.+|+|.| ++||.+.|+++++++|..+|||+|+|||||+ +|.|||+|+.+++++|+++|++.+||+|+|
T Consensus 81 LgF~V~v~~dlt------~~em~~~l~~~s~~dh~~~dc~vvvilSHG~-~g~I~g~D~~~~i~~I~~~F~~~~CpsL~g 153 (173)
T 2ql9_A 81 LGFDVIVYNDCS------CAKMQDLLKKASEEDHTNAACFACILLSHGE-ENVIYGKDGVTPIKDLTAHFRGDRCKTLLE 153 (173)
T ss_dssp HTEEEEEEESCC------HHHHHHHHHHHHTSCCTTEEEEEEEEESCEE-TTEEEETTEEEEHHHHHGGGSTTTCGGGTT
T ss_pred CCCEEEEEeCCC------HHHHHHHHHHHHHhhccCCCeEEEeecCCCC-CCEEEEcCCcEEHHHHHHHcCcccChhHcC
Confidence 589999999865 5899999999999999999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEeC
Q psy13940 81 KPKIFFIQ 88 (88)
Q Consensus 81 KPKlffiQ 88 (88)
||||||||
T Consensus 154 KPKlFfIQ 161 (173)
T 2ql9_A 154 KPKLFFIQ 161 (173)
T ss_dssp SCEEEEEE
T ss_pred CCeEEEEE
Confidence 99999998
No 5
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=99.97 E-value=7.4e-31 Score=178.63 Aligned_cols=81 Identities=25% Similarity=0.511 Sum_probs=77.3
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhh-ccCCCCCeEEEEEecCCCCCccEEeeCCc-cchHhhhhccCcCccccC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQ-EDHSDADCLVITVLTHGLGERYLWAYDMP-YFVEKLWLPFTADKCRTL 78 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~-~~~~~~dc~v~~ilSHG~~~~~i~~~D~~-v~~~~I~~~f~~~~c~~L 78 (88)
+||+|.+++|.| ++||.+.|+++++ .+|..+||++|+|||||. +|.|||+|+. |++++|+++|++++||+|
T Consensus 70 LgF~V~~~~dlt------~~em~~~l~~~~~~~dh~~~dc~vv~ilSHG~-~g~i~g~D~~~v~l~~i~~~F~~~~CpsL 142 (167)
T 1pyo_A 70 LGYDVHVLCDQT------AQEMQEKLQNFAQLPAHRVTDSCIVALLSHGV-EGAIYGVDGKLLQLQEVFQLFDNANCPSL 142 (167)
T ss_dssp TTEEEEEEESCC------HHHHHHHHHHHHTCGGGGTSSEEEEEEESCEE-TTEEECTTSCEEEHHHHHHHTSTTTCGGG
T ss_pred CCCEEEEeeCCC------HHHHHHHHHHhhhhhhccCCCEEEEEeCCCCC-CCeEEEeCCCEEcHHHHHHHhcccCChhH
Confidence 699999999965 5899999999999 699999999999999999 9999999997 999999999999999999
Q ss_pred CCCCeEEEeC
Q psy13940 79 AGKPKIFFIQ 88 (88)
Q Consensus 79 ~gKPKlffiQ 88 (88)
+|||||||||
T Consensus 143 ~gKPKlffiQ 152 (167)
T 1pyo_A 143 QNKPKMFFIQ 152 (167)
T ss_dssp TTSCEEEEEE
T ss_pred cCCCeEEEEE
Confidence 9999999998
No 6
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=99.95 E-value=2.5e-28 Score=176.14 Aligned_cols=81 Identities=33% Similarity=0.578 Sum_probs=77.6
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCc-cchHhhhhccCcCccccCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMP-YFVEKLWLPFTADKCRTLA 79 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~-v~~~~I~~~f~~~~c~~L~ 79 (88)
+||+|.+++|+| ++||.++|+++++++|..+||++|+|||||. +|.|||+|+. +++++|+++|++.+||+|+
T Consensus 61 LGF~V~~~~dlt------~~em~~~l~~~~~~~h~~~d~~v~~ilSHG~-~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~ 133 (271)
T 3h11_B 61 LHFEIKPHDDCT------VEQIYEILKIYQLMDHSNMDCFICCILSHGD-KGIIYGTDGQEAPIYELTSQFTGLKCPSLA 133 (271)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHHSCCTTCSCEEEEEESCEE-TTEEECTTSCEEEHHHHHGGGSTTTCGGGT
T ss_pred CCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCCCEEEEEEEcCCc-CCEEEecCCCeecHHHHHHHhhhccChhhc
Confidence 699999999955 5899999999999899999999999999999 9999999998 9999999999999999999
Q ss_pred CCCeEEEeC
Q psy13940 80 GKPKIFFIQ 88 (88)
Q Consensus 80 gKPKlffiQ 88 (88)
|||||||||
T Consensus 134 gKPKlffiQ 142 (271)
T 3h11_B 134 GKPKVFFIQ 142 (271)
T ss_dssp TSCEEEEEE
T ss_pred CCccEEEEe
Confidence 999999998
No 7
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=99.95 E-value=3.1e-28 Score=176.17 Aligned_cols=81 Identities=38% Similarity=0.619 Sum_probs=77.7
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCccccCCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRTLAG 80 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~L~g 80 (88)
+||+|.+++|+| ++||.++|+++++++|..+||++|+|||||. +|.|||+|+.|++++|+++|++++||+|+|
T Consensus 58 LGF~V~~~~dlt------~~em~~~l~~~~~~~h~~~d~~vv~ilSHG~-~g~i~g~D~~v~l~~I~~~f~~~~CpsL~g 130 (278)
T 3od5_A 58 LGFEVKCFNDLK------AEELLLKIHEVSTVSHADADCFVCVFLSHGE-GNHIYAYDAKIEIQTLTGLFKGDKCHSLVG 130 (278)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHHSCCTTBSCEEEEEESCEE-TTEEECSSSEEEHHHHHHTTSTTTCGGGTT
T ss_pred CCCEEEEecCCC------HHHHHHHHHHHHhhcccCCCEEEEEEECCCC-CCEEEEeCCeEEHHHHHHHhccccChhhcC
Confidence 699999999955 5899999999998899999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEeC
Q psy13940 81 KPKIFFIQ 88 (88)
Q Consensus 81 KPKlffiQ 88 (88)
||||||||
T Consensus 131 KPKlffiQ 138 (278)
T 3od5_A 131 KPKIFIIQ 138 (278)
T ss_dssp SCEEEEEE
T ss_pred CCcEEEEe
Confidence 99999998
No 8
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=99.95 E-value=1.1e-28 Score=178.40 Aligned_cols=81 Identities=27% Similarity=0.485 Sum_probs=76.8
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhc-cCCCCCeEEEEEecCCCCCccEEeeCCc---cchHhhhhccCcCccc
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQE-DHSDADCLVITVLTHGLGERYLWAYDMP---YFVEKLWLPFTADKCR 76 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~-~~~~~dc~v~~ilSHG~~~~~i~~~D~~---v~~~~I~~~f~~~~c~ 76 (88)
+||+|.+++|+| ++||.+.|++++++ +|..+|||+|+|||||. +|.|||+|+. |++++|+++|++++||
T Consensus 66 LgF~V~~~~dlt------~~em~~~l~~~~~~~dh~~~d~~v~~ilSHG~-~g~i~g~D~~~~~v~l~~i~~~f~~~~Cp 138 (272)
T 3h11_A 66 LGYEVQKFLHLS------MHGISQILGQFACMPEHRDYDSFVCVLVSRGG-SQSVYGVDQTHSGLPLHHIRRMFMGDSCP 138 (272)
T ss_dssp HTEEEEEEESCB------HHHHHHHHHHHHTCGGGGGCSEEEEEEEEEEE-TTEECBTSCCSSCEEHHHHHHHHSTTTCG
T ss_pred CCCEEEEeeCCC------HHHHHHHHHHHHhccccCCCCEEEEEEEcCCC-CCeEEEEcCCcceEeHHHHHHHhccccCh
Confidence 489999999955 68999999999985 89999999999999999 9999999996 9999999999999999
Q ss_pred cCCCCCeEEEeC
Q psy13940 77 TLAGKPKIFFIQ 88 (88)
Q Consensus 77 ~L~gKPKlffiQ 88 (88)
+|+|||||||||
T Consensus 139 sL~gKPKlffiQ 150 (272)
T 3h11_A 139 YLAGKPKMFFIQ 150 (272)
T ss_dssp GGTTSCEEEEEE
T ss_pred hhcCCCcEEEEE
Confidence 999999999998
No 9
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=99.94 E-value=8.3e-28 Score=173.30 Aligned_cols=81 Identities=35% Similarity=0.596 Sum_probs=77.1
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCC-------ccEEeeCCc-cchHhhhhccCc
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGE-------RYLWAYDMP-YFVEKLWLPFTA 72 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~-------~~i~~~D~~-v~~~~I~~~f~~ 72 (88)
+||+|.+++|.| ++||.++|+++++++|..+||++|+|||||. + |.||++|+. |++++|+++|++
T Consensus 58 LgF~V~~~~dlt------~~em~~~l~~~~~~~h~~~D~~vv~ilSHG~-~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~ 130 (277)
T 1nw9_B 58 LHFMVEVKGDLT------AKKMVLALLELARQDHGALDCCVVVILSHGC-QASHLQFPGAVYGTDGCPVSVEKIVNIFNG 130 (277)
T ss_dssp TTEEEEEEESCC------HHHHHHHHHHHHHSCCTTCSEEEEEEEEEEE-CCCCSSSCCEEECTTSCEEEHHHHHHTTCT
T ss_pred CCCEEEEEcCCC------HHHHHHHHHHHHHhhcccCCeEEEEEeCCCC-ccccccCCCcEEecCCceeeHHHHHHHhcc
Confidence 699999999966 5899999999999999999999999999999 6 999999997 999999999999
Q ss_pred CccccCCCCCeEEEeC
Q psy13940 73 DKCRTLAGKPKIFFIQ 88 (88)
Q Consensus 73 ~~c~~L~gKPKlffiQ 88 (88)
.+||+|+|||||||||
T Consensus 131 ~~CpsL~gKPKlffiQ 146 (277)
T 1nw9_B 131 TSCPSLGGKPKLFFIQ 146 (277)
T ss_dssp TTCGGGTTSCEEEEEE
T ss_pred cCChhHcCCCcEEEEe
Confidence 9999999999999998
No 10
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=99.94 E-value=7.6e-28 Score=172.60 Aligned_cols=81 Identities=36% Similarity=0.765 Sum_probs=77.6
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCccccCCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRTLAG 80 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~L~g 80 (88)
+||+|.+++|+| ++||.+.|+++++++|..+||++|+|||||. +|.|||+|+.+++++|+++|++.+||+|+|
T Consensus 56 LGF~V~~~~dlt------~~em~~~l~~~~~~~h~~~d~~v~~~lsHG~-~g~i~~~D~~v~l~~i~~~f~~~~cpsL~g 128 (259)
T 3sir_A 56 LDFEVTVYKDCR------YKDILRTIEYSASQNHSDSDCILVAILSHGE-MGYIYAKDTQYKLDNIWSFFTANHCPSLAG 128 (259)
T ss_dssp TTCEEEEEEECS------HHHHHHHHHHHHTSCCTTEEEEEEEEEECTT-CCCCCCTTHHHHHHHTTGGGSTTTCGGGSS
T ss_pred CCCEEEEEeCCC------HHHHHHHHHHHHHhhccCCCEEEEEEecCCC-CCeEEeCCCcEEHHHHHHHhhhccCccccC
Confidence 599999999965 5899999999999899999999999999999 899999999999999999999999999999
Q ss_pred CCeEEEeC
Q psy13940 81 KPKIFFIQ 88 (88)
Q Consensus 81 KPKlffiQ 88 (88)
||||||||
T Consensus 129 KPKlf~iQ 136 (259)
T 3sir_A 129 KPKLFFIQ 136 (259)
T ss_dssp SCEEEEEE
T ss_pred CCCEEEEe
Confidence 99999998
No 11
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=99.94 E-value=1.5e-27 Score=172.74 Aligned_cols=81 Identities=32% Similarity=0.593 Sum_probs=77.8
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCccccCCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRTLAG 80 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~L~g 80 (88)
+||+|.+++|+| ++||.+.|+++++++|..+||++|+|||||. +|.|||+|+.|++++|+++|++.+||+|+|
T Consensus 81 LGF~V~~~~dlt------~~em~~~l~~f~~~dh~~~d~~vv~ilSHG~-~g~i~g~D~~v~l~~I~~~f~~~~CpsL~g 153 (277)
T 4ehd_A 81 LKYEVRNKNDLT------REEIVELMRDVSKEDHSKRSSFVCVLLSHGE-EGIIFGTNGPVDLKKITNFFRGDRCRSLTG 153 (277)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHTSCCTTEEEEEEEEESCEE-TTEEEETTEEEEHHHHHHTTSTTTCGGGTT
T ss_pred CCCEEEEecCCC------HHHHHHHHHHHHhhcccCCCEEEEEEEcCCC-CCEEEEeCCcEeHHHHHHHhhhccCchhcC
Confidence 599999999965 5899999999999899999999999999999 899999999999999999999999999999
Q ss_pred CCeEEEeC
Q psy13940 81 KPKIFFIQ 88 (88)
Q Consensus 81 KPKlffiQ 88 (88)
||||||||
T Consensus 154 KPKlffiQ 161 (277)
T 4ehd_A 154 KPKLFIIQ 161 (277)
T ss_dssp SCEEEEEE
T ss_pred CccEEEEe
Confidence 99999998
No 12
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=99.94 E-value=3.1e-27 Score=168.50 Aligned_cols=81 Identities=32% Similarity=0.593 Sum_probs=77.7
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCccccCCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRTLAG 80 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~L~g 80 (88)
+||+|.+++|.| .+||.++|+++++++|..+||++|+|||||. +|.|||+|+.|++++|+++|++++||+|+|
T Consensus 53 LgF~V~~~~dlt------~~em~~~l~~~~~~~~~~~d~~v~~~lsHG~-~g~i~~~D~~v~l~~i~~~f~~~~cp~L~g 125 (250)
T 2j32_A 53 LKYEVRNKNDLT------REEIVELMRDVSKEDHSKRSSFVCVLLSHGE-EGIIFGTNGPVDLKKITNFFRGDRCRSLTG 125 (250)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHTSCCTTEEEEEEEEESCEE-TTEEEETTEEEEHHHHHHTTSTTTCGGGTT
T ss_pred CCCEEEEEeCCC------HHHHHHHHHHHHHhhccCCCEEEEEECCCCC-CCeEEecCCcEEHHHHHHHhccccChhHcC
Confidence 699999999966 5899999999999999999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEeC
Q psy13940 81 KPKIFFIQ 88 (88)
Q Consensus 81 KPKlffiQ 88 (88)
||||||||
T Consensus 126 KPKlf~iq 133 (250)
T 2j32_A 126 KPKLFIIQ 133 (250)
T ss_dssp SCEEEEEE
T ss_pred CCeEEEEe
Confidence 99999998
No 13
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=99.94 E-value=4.3e-27 Score=169.77 Aligned_cols=81 Identities=47% Similarity=0.763 Sum_probs=77.8
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCccccCCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRTLAG 80 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~L~g 80 (88)
+||+|.+++|.| ++||.++|+++++++|..+||++|+|||||. +|.|||+|+.|++++|+++|++++||+|+|
T Consensus 68 LGF~V~~~~dlt------~~em~~~l~~~~~~dh~~~d~~v~~~lsHG~-~~~i~~~D~~v~l~~i~~~f~~~~cpsL~g 140 (272)
T 1m72_A 68 LGFKVTVFPNLK------SEEINKFIQQTAEMDHSDADCLLVAVLTHGE-LGMLYAKDTHYKPDNLWYYFTADKCPTLAG 140 (272)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHTSCCTTEEEEEEEEESCEE-TTEEECSSSEECTTHHHHTTSTTTCGGGTT
T ss_pred CCCEEEEecCcC------HHHHHHHHHHHHHhhcCCCCEEEEEEcCCCC-CCEEEecCCcEEHHHHHHHhccccChhhcC
Confidence 699999999966 5899999999999899999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEeC
Q psy13940 81 KPKIFFIQ 88 (88)
Q Consensus 81 KPKlffiQ 88 (88)
||||||||
T Consensus 141 KPKlffiq 148 (272)
T 1m72_A 141 KPKLFFIQ 148 (272)
T ss_dssp SCEEEEEE
T ss_pred CceEEEEe
Confidence 99999998
No 14
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=99.94 E-value=7e-27 Score=160.29 Aligned_cols=81 Identities=16% Similarity=0.395 Sum_probs=75.9
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhc-cCCCCCeEEEEEecCCCCCccEEeeCC------ccchHhhhhccCcC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQE-DHSDADCLVITVLTHGLGERYLWAYDM------PYFVEKLWLPFTAD 73 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~-~~~~~dc~v~~ilSHG~~~~~i~~~D~------~v~~~~I~~~f~~~ 73 (88)
+||+|.+++|.| ++||.++|++|+++ +|+.+||++|+|||||. +|.|||+|+ .|++++|+++|++.
T Consensus 77 LgF~V~~~~dlt------~~em~~~l~~f~~~~d~~~~d~~v~~~lsHG~-~g~i~g~D~~~~~~~~v~l~~I~~~f~~~ 149 (178)
T 2h54_A 77 LGYSVDVKKNLT------ASDMTTELEAFAHRPEHKTSDSTFLVFMSHGI-REGICGKKHSEQVPDILQLNAIFNMLNTK 149 (178)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHTCGGGGGCSCEEEEEESCBC-SSCEECTTCCSSSCCEECHHHHHHHHSTT
T ss_pred CCCEEEEecCCC------HHHHHHHHHHHHhhhhcCCCCEEEEEEecCCC-CCeEEeecCCcccCcEEEHHHHHHHHhhc
Confidence 599999999955 58999999999874 89999999999999999 999999998 39999999999999
Q ss_pred ccccCCCCCeEEEeC
Q psy13940 74 KCRTLAGKPKIFFIQ 88 (88)
Q Consensus 74 ~c~~L~gKPKlffiQ 88 (88)
+||+|+|||||||||
T Consensus 150 ~CpsL~gKPKlffiq 164 (178)
T 2h54_A 150 NCPSLKDKPKVIIIQ 164 (178)
T ss_dssp TCGGGTTSCEEEEEE
T ss_pred CChhhcCCceEEEEE
Confidence 999999999999998
No 15
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=99.93 E-value=4.7e-27 Score=172.68 Aligned_cols=81 Identities=20% Similarity=0.341 Sum_probs=77.3
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCC-CCCeEEEEEecCCCCC----ccEEeeCCc-cchHhhhhccCcCc
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHS-DADCLVITVLTHGLGE----RYLWAYDMP-YFVEKLWLPFTADK 74 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~-~~dc~v~~ilSHG~~~----~~i~~~D~~-v~~~~I~~~f~~~~ 74 (88)
+||+|.+++|+| ++||.++|+++++++|. .+||++|+|||||. + |.|||+|+. |++++|+++|++.+
T Consensus 96 LGF~V~~~~dlt------~~em~~~l~~f~~~~h~~~~D~~vv~ilSHG~-~~~g~g~i~g~D~~~v~l~~I~~~f~~~~ 168 (316)
T 2fp3_A 96 LNFTIFPYGNVN------QDQFFKLLTMVTSSSYVQNTECFVMVLMTHGN-SVEGKEKVEFRDGSVVDMQKIKDHFQTAK 168 (316)
T ss_dssp TTEEEEEECSCC------HHHHHHHHHHHHTSHHHHTCSCEEEEEESCEE-CCTTCCEEECTTSCEEEHHHHHHTTSTTT
T ss_pred CCCEEEEccCCC------HHHHHHHHHHHHHHhhcCCCCEEEEEEccCCC-ccCCCCEEEeecCcEEeHHHHHHHhcccc
Confidence 699999999965 58999999999999898 99999999999999 7 999999999 99999999999999
Q ss_pred cccCCCCCeEEEeC
Q psy13940 75 CRTLAGKPKIFFIQ 88 (88)
Q Consensus 75 c~~L~gKPKlffiQ 88 (88)
||+|+|||||||||
T Consensus 169 CpsL~gKPKlffiQ 182 (316)
T 2fp3_A 169 CPYLVNKPKVLMFP 182 (316)
T ss_dssp CGGGTTSCEEEEES
T ss_pred ChhhcCCceEEEEe
Confidence 99999999999999
No 16
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=99.93 E-value=1.2e-26 Score=170.35 Aligned_cols=81 Identities=46% Similarity=0.735 Sum_probs=77.7
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCccccCCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRTLAG 80 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~L~g 80 (88)
+||+|.+++|.| ++||.++|+++++++|..+||++|+|||||. +|.||++|+.|++++|+++|++.+||+|+|
T Consensus 96 LGF~V~~~~dlt------~~em~~~l~~f~~~dh~~~D~~vv~ilSHG~-~g~i~g~D~~v~l~~I~~~f~~~~CpsL~g 168 (310)
T 2nn3_C 96 LGFKVTVFPNLK------SEEINKFIQQTAEMDHSDADCLLVAVLTAGE-LGMLYAKDTHYKPDNLWYYFTADKCPTLAG 168 (310)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHSSCGGGBSCEEEEEEEEEE-TTEEECSSCEECTHHHHGGGSTTTCGGGTT
T ss_pred CCCEEEEecCCC------HHHHHHHHHHHHHhccCCCCEEEEEEeCCCC-CCEEEecCCcEEHHHHHHHhccccChhhcC
Confidence 699999999966 5899999999999889999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEeC
Q psy13940 81 KPKIFFIQ 88 (88)
Q Consensus 81 KPKlffiQ 88 (88)
||||||||
T Consensus 169 KPKlffiQ 176 (310)
T 2nn3_C 169 KPKLFFIQ 176 (310)
T ss_dssp SCEEEEEE
T ss_pred CceEEEEe
Confidence 99999998
No 17
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=99.92 E-value=6.8e-26 Score=165.72 Aligned_cols=81 Identities=16% Similarity=0.399 Sum_probs=76.0
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhh-ccCCCCCeEEEEEecCCCCCccEEeeCC-----c-cchHhhhhccCcC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQ-EDHSDADCLVITVLTHGLGERYLWAYDM-----P-YFVEKLWLPFTAD 73 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~-~~~~~~dc~v~~ilSHG~~~~~i~~~D~-----~-v~~~~I~~~f~~~ 73 (88)
+||+|.+++|+| ++||.++|++|++ .+|..+||++|+|||||. ++.|||+|+ . |++++|+++|+++
T Consensus 94 LGF~V~~~~dlt------~~em~~~l~~f~~~~dh~~~d~~vv~~lsHG~-~~~i~g~D~~~~~~~~v~l~~I~~~F~~~ 166 (302)
T 3e4c_A 94 LGYSVDVKKNLT------ASDMTTELEAFAHRPEHKTSDSTFLVFMSHGI-REGICGKKHSEQVPDILQLNAIFNMLNTK 166 (302)
T ss_dssp TTCEEEEEESCC------HHHHHHHHHHHHTCGGGGGCSCEEEEEEEEEE-TTEEECTTCCSSSCCEECHHHHHHHTSTT
T ss_pred CCCEEEEeeCCC------HHHHHHHHHHHHhhhccCCCCEEEEEEeccCc-CCeEEeecccccCCcEEEHHHHHHHHhhh
Confidence 699999999966 5899999999987 489999999999999999 999999996 4 9999999999999
Q ss_pred ccccCCCCCeEEEeC
Q psy13940 74 KCRTLAGKPKIFFIQ 88 (88)
Q Consensus 74 ~c~~L~gKPKlffiQ 88 (88)
+||+|+|||||||||
T Consensus 167 ~CpsL~gKPKlffIQ 181 (302)
T 3e4c_A 167 NCPSLKDKPKVIIIQ 181 (302)
T ss_dssp TCGGGTTSCEEEEEE
T ss_pred cchhhcCCccEEEEE
Confidence 999999999999998
No 18
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=99.92 E-value=6.2e-26 Score=166.18 Aligned_cols=81 Identities=33% Similarity=0.555 Sum_probs=77.3
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCccccCCC
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRTLAG 80 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~L~g 80 (88)
+||+|.+++|.| ++||.++|+++++++|..+||++|+|||||. ++.|||+|+.+++++|+++|++.+||+|+|
T Consensus 106 LGF~V~~~~dlt------~~em~~~l~~~~~~~h~~~d~~vv~ilsHG~-~~~i~g~D~~v~l~~I~~~f~~~~CpsL~g 178 (305)
T 1f1j_A 106 LGFDVIVYNDCS------CAKMQDLLKKASEEDHTNAACFACILLSHGE-ENVIYGKDGVTPIKDLTAHFRGDRSKTLLE 178 (305)
T ss_dssp HTEEEEEEESCC------HHHHHHHHHHHHHSCGGGEEEEEEEEESCEE-TTEEECSSSEEEHHHHHHTTSTTTCGGGTT
T ss_pred CCCEEEEecCcC------HHHHHHHHHHHHHhhcCCCCEEEEEEecCCC-CCeEEecCCeEEHHHHHHHhhhccChhhcC
Confidence 489999999865 5899999999999999999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEeC
Q psy13940 81 KPKIFFIQ 88 (88)
Q Consensus 81 KPKlffiQ 88 (88)
||||||||
T Consensus 179 KPKlffiQ 186 (305)
T 1f1j_A 179 KPKLFFIQ 186 (305)
T ss_dssp SCEEEEEE
T ss_pred CceEEEec
Confidence 99999998
No 19
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=99.08 E-value=8.8e-11 Score=88.47 Aligned_cols=76 Identities=16% Similarity=0.222 Sum_probs=62.2
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCC---CccEEeeCCc--------cchHhhhhc
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLG---ERYLWAYDMP--------YFVEKLWLP 69 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~---~~~i~~~D~~--------v~~~~I~~~ 69 (88)
.||+|..++|. |+++|.+.|+++++.. ...||+++++++||.. .+.++++|+. +++++|.+.
T Consensus 39 lGF~V~~l~Dl------T~~eI~~aL~~f~~~~-~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~ 111 (390)
T 3uoa_B 39 LDFKVVSLLDL------TEYEMRNAVDEFLLLL-DKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKL 111 (390)
T ss_dssp TTCEEEEEESC------CHHHHHHHHHHHHHTC-CTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHH
T ss_pred cCCeEEEeecC------CHHHHHHHHHHHHhhC-CCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHH
Confidence 58999998874 4689999999999874 4579999999999972 2456677763 789999998
Q ss_pred cCcCccccCCCCCeEEEeC
Q psy13940 70 FTADKCRTLAGKPKIFFIQ 88 (88)
Q Consensus 70 f~~~~c~~L~gKPKlffiQ 88 (88)
|++ +.+|||+||+|
T Consensus 112 l~~-----~~~K~kL~ILD 125 (390)
T 3uoa_B 112 MQE-----KETGLNVFLLD 125 (390)
T ss_dssp HHH-----TTCSEEEEEEE
T ss_pred HHh-----cCCCceEEEEE
Confidence 863 57999999997
No 20
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=94.97 E-value=0.085 Score=37.32 Aligned_cols=78 Identities=13% Similarity=0.218 Sum_probs=53.5
Q ss_pred CCceEEEEecCCCcccchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCC------------CccEEeeCCccchHhhhh
Q psy13940 1 MKFKLVSQEDHSDADCLVITVLTHGLGELSQEDHSDADCLVITVLTHGLG------------ERYLWAYDMPYFVEKLWL 68 (88)
Q Consensus 1 ~~f~v~~~~~~t~~~~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~------------~~~i~~~D~~v~~~~I~~ 68 (88)
.||.+....|. +.|.++|...|+.+.+. ....|.+++.+..||.. .+.+...|+.+.-++|..
T Consensus 43 ~Gf~v~~l~~~----~~t~~~i~~al~~l~~~-~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~~i~~~~l~~ 117 (285)
T 3bij_A 43 RGFAVTTLMTK----AATRAKVIDAIGKAAKA-LGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDGELIDDELYA 117 (285)
T ss_dssp TTCEEEEEEGG----GCCHHHHHHHHHHHHHH-CCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSSEEEHHHHHH
T ss_pred cCCceEEecCC----ccCHHHHHHHHHHHHHh-CCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCCCccHHHHHH
Confidence 37876555542 25678999999999875 34569999999999962 135677788766678888
Q ss_pred ccCcCccccCCCCCeEEEe
Q psy13940 69 PFTADKCRTLAGKPKIFFI 87 (88)
Q Consensus 69 ~f~~~~c~~L~gKPKlffi 87 (88)
.+.. +| .++.+++|+
T Consensus 118 ~l~~--l~--~~~~~~vil 132 (285)
T 3bij_A 118 LLGK--FA--AGVRVLVFS 132 (285)
T ss_dssp HHTT--SC--SSCEEEEEE
T ss_pred HHHh--cc--CCCeEEEEE
Confidence 7742 33 245555554
No 21
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=72.81 E-value=7.2 Score=28.67 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=28.1
Q ss_pred chHHHHHHHHHHhhhccCCCCCeEEEEEecCCCC
Q psy13940 17 LVITVLTHGLGELSQEDHSDADCLVITVLTHGLG 50 (88)
Q Consensus 17 Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~ 50 (88)
.|.++|.+.|+.+.+. ....|.+++.+..||..
T Consensus 109 pTr~nI~~aL~~L~~~-a~pgD~llfYFSGHG~q 141 (350)
T 4f6o_A 109 PTRANMIRAMQWLVKD-AQPNDSLFLHYSGHGGQ 141 (350)
T ss_dssp CCHHHHHHHHHHHHTT-CCTTCEEEEEEESCEEE
T ss_pred CCHHHHHHHHHHHHHh-CCCCCEEEEEEcCCcee
Confidence 5789999999999875 45679999999999973
No 22
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=62.96 E-value=7.3 Score=28.84 Aligned_cols=53 Identities=11% Similarity=0.019 Sum_probs=38.3
Q ss_pred cchHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCC-----------ccEEeeC----CccchHhhhhc
Q psy13940 16 CLVITVLTHGLGELSQEDHSDADCLVITVLTHGLGE-----------RYLWAYD----MPYFVEKLWLP 69 (88)
Q Consensus 16 ~Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~-----------~~i~~~D----~~v~~~~I~~~ 69 (88)
+-|.++|...++.+.+. -...|.+++....||... ..++..| |.+.-++|.+.
T Consensus 148 ~pTr~nI~~aL~~L~~~-a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~ddeL~~l 215 (367)
T 4af8_A 148 QPTRDNIVRYMAWLVKD-AKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVDDDIHKL 215 (367)
T ss_dssp CCCHHHHHHHHHHHHHT-CCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHh-CCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccHHHHHHH
Confidence 56889999999999875 456799999999999731 1255555 33555677666
No 23
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=41.83 E-value=33 Score=22.46 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=25.4
Q ss_pred cchHHHHHHHHHHhhhc---cCCCCCeEEEEEecCCC
Q psy13940 16 CLVITVLTHGLGELSQE---DHSDADCLVITVLTHGL 49 (88)
Q Consensus 16 ~Lt~~ei~~~l~~~~~~---~~~~~dc~v~~ilSHG~ 49 (88)
-++++||...+++++.. +....+-+++.||.=|-
T Consensus 13 lis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~ 49 (181)
T 3acd_A 13 QISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAF 49 (181)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTH
T ss_pred EeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcH
Confidence 47899999999999873 44445667778886554
No 24
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=40.26 E-value=65 Score=19.97 Aligned_cols=66 Identities=9% Similarity=0.008 Sum_probs=39.3
Q ss_pred chHHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCcccc----------CCCCCeEEE
Q psy13940 17 LVITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRT----------LAGKPKIFF 86 (88)
Q Consensus 17 Lt~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~----------L~gKPKlff 86 (88)
|...++.++.+++.... ..+.-+++-+ . |+ . .+...-|. .++++.+.|..+.|.- ...+||++|
T Consensus 4 ~~~~~~~~a~~~v~~~~-~~~~wilf~~-~-~~-~-i~v~~~G~-g~~e~~~~L~~~~~~Ya~~r~~~~~~~~~~~K~vf 77 (141)
T 1t3y_A 4 IDKEACRAAYNLVRDDG-SAVIWVTFKY-D-GS-T-IVPGEQGA-EYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFAL 77 (141)
T ss_dssp ECHHHHHHHHHHHHCTT-SSCCEEEEEE-E-TT-E-EEEEEEES-SHHHHHHHCCTTCEEEEEEEEEECSGGGCEEEEEE
T ss_pred CChHHHHHHHHHHHcCC-CCceEEEEEE-c-CC-E-EEEEecCC-CHHHHHhhCCCCceEEEEEEEEecCCCCceeeEEE
Confidence 55788999999998742 2233333333 2 33 3 22222234 5888888887766632 236789998
Q ss_pred eC
Q psy13940 87 IQ 88 (88)
Q Consensus 87 iQ 88 (88)
|.
T Consensus 78 I~ 79 (141)
T 1t3y_A 78 IT 79 (141)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 25
>3uws_A Hypothetical protein; clostripain family protein, peptidase_C11, structural genomi center for structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides merdae}
Probab=38.19 E-value=62 Score=20.01 Aligned_cols=29 Identities=24% Similarity=0.387 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhhhccCCCCCeEEEEEecCCC
Q psy13940 19 ITVLTHGLGELSQEDHSDADCLVITVLTHGL 49 (88)
Q Consensus 19 ~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~ 49 (88)
.+.|.+.|+...+. -..+...++|-+||.
T Consensus 86 ~~~l~~~l~~~~~~--~PA~~y~LIlw~HG~ 114 (126)
T 3uws_A 86 PDVMRSVIGEVVSQ--YPADSYGLVLWSHGT 114 (126)
T ss_dssp HHHHHHHHHHHHHH--SCEEEEEEEEESCBC
T ss_pred HHHHHHHHHHHHHh--CCccceEEEEEeCCC
Confidence 66777777777664 344778899999998
No 26
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=34.14 E-value=15 Score=26.96 Aligned_cols=11 Identities=45% Similarity=0.401 Sum_probs=7.3
Q ss_pred CCceEEEEecC
Q psy13940 1 MKFKLVSQEDH 11 (88)
Q Consensus 1 ~~f~v~~~~~~ 11 (88)
+||+|......
T Consensus 73 ~G~~v~~~~~~ 83 (371)
T 3tla_A 73 KGFKLVSGKLT 83 (371)
T ss_dssp TTCEEEECTTT
T ss_pred CCCEEEECCch
Confidence 57888766544
No 27
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=33.43 E-value=13 Score=26.51 Aligned_cols=12 Identities=33% Similarity=0.404 Sum_probs=7.5
Q ss_pred CCceEEEEecCC
Q psy13940 1 MKFKLVSQEDHS 12 (88)
Q Consensus 1 ~~f~v~~~~~~t 12 (88)
+||+|...+...
T Consensus 42 ~G~~v~~~~~~~ 53 (327)
T 4h1h_A 42 MGFKVTFGEHVA 53 (327)
T ss_dssp TTCEEEECTTTT
T ss_pred CCCEEEECcchh
Confidence 577777665543
No 28
>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2
Probab=31.56 E-value=96 Score=19.33 Aligned_cols=55 Identities=7% Similarity=0.097 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCc-cchHhhhhccCcCccc
Q psy13940 20 TVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMP-YFVEKLWLPFTADKCR 76 (88)
Q Consensus 20 ~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~-v~~~~I~~~f~~~~c~ 76 (88)
+++.+++++++.........+++-| +--. ...+....+. ..++++.+.+..+.|.
T Consensus 18 ~e~~~a~~~lr~~k~~~~~~iifki-~~~~-~~I~v~~~~~~~~~~el~~~Lp~~~pr 73 (151)
T 1v6f_A 18 EDLVEKLRKFRFRKETHNAAIIMKI-DKDE-RLVVLDEELEGVSPDELKDELPERQPR 73 (151)
T ss_dssp HHHHHHHHHHHTCCCSSCEEEEEEE-CSSS-CEEEEEEEEESCCHHHHGGGSCSSSCE
T ss_pred HHHHHHHHHHHhccCCCccEEEEEE-cCCC-cEEEEEecCCCCCHHHHHhhCCCCCce
Confidence 6789999999874222333333333 2222 3333333343 6788998888766653
No 29
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=29.94 E-value=97 Score=18.87 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCCccchHhhhhccCcCcccc--------CCCCCeEEEe
Q psy13940 19 ITVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDMPYFVEKLWLPFTADKCRT--------LAGKPKIFFI 87 (88)
Q Consensus 19 ~~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~~v~~~~I~~~f~~~~c~~--------L~gKPKlffi 87 (88)
.+++.+.++++.........-+++-| . +. +..+...-|. .++++.+.+..+.|.- =..++|++||
T Consensus 12 ~~e~~~a~~~~~~~~~~~~~~ii~~i-~-~~-~~i~v~~~g~-~~~el~~~l~~~~~rY~~~~~~~~~~~~~k~vfI 84 (141)
T 1hqz_1 12 SREIDAEYLKIVRGSDPDTTWLIISP-N-AK-KEYEPESTGS-SFHDFLQLFDETKVQYGLARVSPPGSDVEKIIII 84 (141)
T ss_dssp HHHHHHHHHHHHHTCCTTCCEEEEEE-C-TT-SCEEEEEEES-CHHHHHTCCCTTSCEEEEEEECCTTCSCCEEEEE
T ss_pred CHHHHHHHHHHHhCCCCCceEEEEEE-c-CC-CEEEEEeecC-CHHHHHhhCCCCceEEEEEEEecCCCceeeEEEE
Confidence 58899999998775222344444444 3 23 3333333344 8889988886655521 1356888887
No 30
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=25.15 E-value=1.1e+02 Score=21.82 Aligned_cols=11 Identities=9% Similarity=0.244 Sum_probs=7.0
Q ss_pred CCceEEEEecC
Q psy13940 1 MKFKLVSQEDH 11 (88)
Q Consensus 1 ~~f~v~~~~~~ 11 (88)
+||+|...+..
T Consensus 42 ~G~~v~~~~~~ 52 (331)
T 4e5s_A 42 LGFHVTFSTHA 52 (331)
T ss_dssp TTCEEEECTTT
T ss_pred CCCEEEECCch
Confidence 57777766543
No 31
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=22.83 E-value=1.4e+02 Score=18.35 Aligned_cols=52 Identities=8% Similarity=0.066 Sum_probs=28.7
Q ss_pred HHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEee--CCccchHhhhhccCcCccc
Q psy13940 20 TVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAY--DMPYFVEKLWLPFTADKCR 76 (88)
Q Consensus 20 ~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~--D~~v~~~~I~~~f~~~~c~ 76 (88)
++..+.+++++.+.+ ..+++.| +-.. ...+... ++..+++++.+.+..+.|.
T Consensus 10 de~~~af~~lk~~k~---~~vi~~I-~~~~-~~i~v~~~~~~~~~~~e~~~~L~~~~pr 63 (144)
T 2kvk_A 10 ESVRGAIDDLRMKKS---RYVMMCI-GADG-KKIEVTEVGERSVNYTDLKEKFSTEKPC 63 (144)
T ss_dssp HHHHHHHHHHHTTSS---SEEEEEE-CTTS-CEEEEEEEECTTCCHHHHHHTCCTTSCC
T ss_pred HHHHHHHHHHhcCCc---eEEEEEE-eCCC-cEEEEEeccCCCCCHHHHHHhCCccCce
Confidence 678888888876432 3333333 2222 2333322 2236788998888766553
No 32
>1wxa_A Afadin, AF-6 protein; RAS-binding domain, ubiquitin-like fold, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.15.1.5
Probab=22.56 E-value=73 Score=19.41 Aligned_cols=51 Identities=14% Similarity=0.237 Sum_probs=28.6
Q ss_pred chHHHHHHHHHHhhhc-cCCCCCeEEEEEe--------cCCCCCccEEeeCCc-cchHhhhh
Q psy13940 17 LVITVLTHGLGELSQE-DHSDADCLVITVL--------THGLGERYLWAYDMP-YFVEKLWL 68 (88)
Q Consensus 17 Lt~~ei~~~l~~~~~~-~~~~~dc~v~~il--------SHG~~~~~i~~~D~~-v~~~~I~~ 68 (88)
.+.+-+.++|+.+.-. ...+.=|++-+++ ..|. ...+.+.|.. +.+...+.
T Consensus 35 ta~~vV~eaLekygL~~~~~~~Y~LveV~~~~~~~~~~~~g~-~ErvL~~~E~Pl~i~~~w~ 95 (116)
T 1wxa_A 35 TADFAVAESLEKYGLEKENPKDYCIARVMLPPGAQHSDERGA-KEIILDDDECPLQIFREWP 95 (116)
T ss_dssp CHHHHHHHHHHHHTCSSSCTTTEEEEEEECCSSCCSSSSTTC-EEECCCSSCCHHHHHHTCC
T ss_pred CHHHHHHHHHHHhCCCCCCchheEEEEEECccccccccCCCc-eEEECCCCCCHHHHHHhcc
Confidence 3456788888888542 2223334444444 4666 5566666554 65555443
No 33
>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=20.68 E-value=69 Score=18.33 Aligned_cols=17 Identities=12% Similarity=0.053 Sum_probs=12.4
Q ss_pred cCCCcccchHHHHHHHH
Q psy13940 10 DHSDADCLVITVLTHGL 26 (88)
Q Consensus 10 ~~t~~~~Lt~~ei~~~l 26 (88)
+.|..+.||.||+....
T Consensus 43 ~ktdP~~LT~eEi~~Fa 59 (71)
T 2eo2_A 43 HKTDPSTLTEEEVRKFA 59 (71)
T ss_dssp CCCSTTTCCHHHHHHHH
T ss_pred CCCCcccCCHHHHhhce
Confidence 45777889998876544
No 34
>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}
Probab=20.65 E-value=1.6e+02 Score=18.13 Aligned_cols=50 Identities=6% Similarity=-0.017 Sum_probs=27.5
Q ss_pred HHHHHHHHHhhhccCCCCCeEEEEEecCCCCCccEEeeCC-c-cchHhhhhccCcCcc
Q psy13940 20 TVLTHGLGELSQEDHSDADCLVITVLTHGLGERYLWAYDM-P-YFVEKLWLPFTADKC 75 (88)
Q Consensus 20 ~ei~~~l~~~~~~~~~~~dc~v~~ilSHG~~~~~i~~~D~-~-v~~~~I~~~f~~~~c 75 (88)
+|..+.++++..+. ..-+ ++-++=. ...+.-..+ . -+++++.+.+..+.|
T Consensus 18 de~~~af~~lk~~k---~~~i-i~~i~d~--~~~vv~~~~~~~~~~de~~~~L~~~~p 69 (144)
T 2lj8_A 18 DECVTALNDLRHKK---SRYV-IMHIVDQ--KSIAVKTIGERGANFDQFIEAIDKNVP 69 (144)
T ss_dssp HHHHHHHHHHTTTS---SSEE-EEEEETT--TEEEEEEECSSCCCHHHHHHHCCSSSC
T ss_pred HHHHHHHHHHhcCC---ceEE-EEEEECC--cEEEEEecCCCCCCHHHHHHhCcccCC
Confidence 56777888776542 2333 3333322 223322222 2 678898888876655
No 35
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=20.33 E-value=60 Score=19.14 Aligned_cols=17 Identities=12% Similarity=0.169 Sum_probs=14.9
Q ss_pred ccchHHHHHHHHHHhhh
Q psy13940 15 DCLVITVLTHGLGELSQ 31 (88)
Q Consensus 15 ~~Lt~~ei~~~l~~~~~ 31 (88)
+||+.+||.+.++.+.+
T Consensus 83 ~n~s~~eI~~~l~~l~~ 99 (102)
T 1s3a_A 83 NNFSADQVTRALENVLS 99 (102)
T ss_dssp TTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 57999999999998875
No 36
>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M
Probab=20.27 E-value=1e+02 Score=19.79 Aligned_cols=31 Identities=10% Similarity=-0.099 Sum_probs=24.6
Q ss_pred ccEEeeCCc-cchHhhhhccCcCccccCCCCC
Q psy13940 52 RYLWAYDMP-YFVEKLWLPFTADKCRTLAGKP 82 (88)
Q Consensus 52 ~~i~~~D~~-v~~~~I~~~f~~~~c~~L~gKP 82 (88)
..|.++|.. +..+.|.+.+.+..--+|-|+|
T Consensus 142 ~~i~atd~~El~~e~i~~kl~~~~~~~~~~~~ 173 (174)
T 1ak6_A 142 HECQANGPEDLNRACIAEKLGGSLIVAFEGCP 173 (174)
T ss_dssp CCEEESSTTTTCHHHHHHHTTTTSCSTTTTSC
T ss_pred EEEEECChhhcCHHHHHHHhccCceeeecCCc
Confidence 367888876 9999999988776556888888
Done!