Query psy13945
Match_columns 86
No_of_seqs 122 out of 1540
Neff 12.1
Searched_HMMs 46136
Date Fri Aug 16 15:39:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13945.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13945hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 99.9 2.4E-21 5.3E-26 104.2 7.9 85 1-85 117-203 (480)
2 KOG0263|consensus 99.9 5.4E-21 1.2E-25 108.9 7.7 84 2-85 538-622 (707)
3 KOG0266|consensus 99.8 1.3E-19 2.9E-24 101.5 11.7 85 1-85 205-291 (456)
4 KOG0272|consensus 99.8 3.4E-20 7.3E-25 100.4 7.6 85 1-85 305-390 (459)
5 KOG0271|consensus 99.8 2.2E-19 4.7E-24 96.9 7.5 84 2-85 370-454 (480)
6 KOG0319|consensus 99.8 1.2E-18 2.6E-23 99.5 9.3 84 2-85 466-550 (775)
7 KOG0266|consensus 99.8 9.2E-18 2E-22 94.2 11.5 83 1-83 248-333 (456)
8 KOG0272|consensus 99.8 2.4E-19 5.1E-24 97.2 4.8 84 2-85 264-348 (459)
9 KOG0279|consensus 99.8 5.9E-18 1.3E-22 88.1 8.8 80 1-80 150-232 (315)
10 KOG0284|consensus 99.8 1.1E-18 2.3E-23 94.6 5.6 85 1-85 182-267 (464)
11 PTZ00421 coronin; Provisional 99.8 8.2E-17 1.8E-21 91.0 13.0 83 1-83 127-211 (493)
12 KOG0316|consensus 99.8 1.1E-17 2.4E-22 85.8 8.5 86 1-86 19-105 (307)
13 PTZ00421 coronin; Provisional 99.8 6.7E-17 1.4E-21 91.3 12.4 85 1-85 77-171 (493)
14 KOG0292|consensus 99.8 9.4E-18 2E-22 98.0 8.4 85 1-85 53-138 (1202)
15 KOG0286|consensus 99.7 8.1E-17 1.8E-21 84.5 10.3 85 1-86 147-233 (343)
16 KOG0295|consensus 99.7 9E-17 1.9E-21 86.2 10.5 73 12-84 305-378 (406)
17 KOG0319|consensus 99.7 3.6E-17 7.8E-22 93.6 8.5 84 2-85 508-592 (775)
18 KOG0265|consensus 99.7 1.3E-16 2.9E-21 83.9 9.8 85 2-86 50-136 (338)
19 KOG0279|consensus 99.7 7.2E-17 1.6E-21 84.2 8.6 85 2-86 108-196 (315)
20 KOG0285|consensus 99.7 1.3E-16 2.9E-21 85.8 9.7 84 2-85 238-322 (460)
21 KOG0291|consensus 99.7 2.2E-16 4.7E-21 91.0 10.8 81 1-81 352-433 (893)
22 KOG0263|consensus 99.7 3.1E-17 6.7E-22 93.9 7.4 85 1-85 495-580 (707)
23 KOG0285|consensus 99.7 3.6E-17 7.8E-22 87.9 7.0 85 1-85 153-238 (460)
24 KOG0276|consensus 99.7 1.5E-17 3.3E-22 94.2 5.6 86 1-86 142-231 (794)
25 KOG0318|consensus 99.7 4.1E-16 8.9E-21 87.0 10.7 78 2-79 193-274 (603)
26 KOG0275|consensus 99.7 2.1E-18 4.6E-23 92.0 1.3 86 1-86 265-352 (508)
27 KOG0308|consensus 99.7 2.2E-16 4.9E-21 89.7 9.0 85 1-85 173-258 (735)
28 PTZ00420 coronin; Provisional 99.7 2.5E-15 5.5E-20 86.0 12.7 83 1-84 127-211 (568)
29 KOG0315|consensus 99.7 4.2E-15 9.1E-20 77.0 10.1 82 2-83 218-301 (311)
30 KOG0292|consensus 99.7 1.4E-16 3E-21 93.4 4.8 85 2-86 12-97 (1202)
31 KOG0289|consensus 99.7 1.2E-15 2.6E-20 83.6 8.0 77 2-78 350-427 (506)
32 KOG0273|consensus 99.7 3.4E-15 7.4E-20 82.4 9.2 85 1-85 361-455 (524)
33 KOG0275|consensus 99.6 8.4E-17 1.8E-21 86.1 2.7 84 2-85 216-309 (508)
34 KOG0291|consensus 99.6 7.2E-15 1.6E-19 85.0 10.2 85 1-85 309-395 (893)
35 KOG0643|consensus 99.6 1.1E-14 2.4E-19 76.0 9.8 79 1-79 12-91 (327)
36 KOG0265|consensus 99.6 2.7E-15 5.8E-20 79.1 7.5 78 1-78 92-171 (338)
37 KOG0284|consensus 99.6 2.4E-16 5.2E-21 85.7 3.5 84 2-85 225-309 (464)
38 KOG1273|consensus 99.6 3E-15 6.5E-20 79.7 7.4 77 3-79 27-104 (405)
39 KOG0286|consensus 99.6 1.1E-14 2.4E-19 76.7 9.3 78 2-79 189-268 (343)
40 PTZ00420 coronin; Provisional 99.6 5.8E-14 1.3E-18 80.6 12.2 79 1-79 76-165 (568)
41 KOG0281|consensus 99.6 5.2E-16 1.1E-20 83.6 3.6 82 2-86 323-404 (499)
42 KOG0273|consensus 99.6 1.4E-14 3.1E-19 80.1 9.1 82 2-84 238-320 (524)
43 KOG0281|consensus 99.6 7E-16 1.5E-20 83.1 3.7 81 2-85 200-280 (499)
44 KOG0299|consensus 99.6 2.8E-15 6E-20 82.4 5.7 84 2-85 205-289 (479)
45 KOG0316|consensus 99.6 8.8E-15 1.9E-19 75.4 7.0 82 2-83 62-146 (307)
46 KOG0276|consensus 99.6 3.4E-14 7.3E-19 81.1 9.7 86 1-86 99-187 (794)
47 KOG0647|consensus 99.6 5.2E-14 1.1E-18 74.5 9.6 78 1-79 74-154 (347)
48 KOG0973|consensus 99.6 3.5E-14 7.7E-19 83.9 9.9 85 1-85 71-174 (942)
49 cd00200 WD40 WD40 domain, foun 99.6 1.5E-13 3.4E-18 71.7 11.4 84 1-84 11-95 (289)
50 KOG0315|consensus 99.6 2.4E-14 5.1E-19 74.3 7.9 76 2-78 86-162 (311)
51 KOG0645|consensus 99.6 2.2E-13 4.7E-18 71.3 11.3 85 1-85 63-153 (312)
52 KOG0282|consensus 99.6 2.1E-15 4.4E-20 83.3 3.7 83 1-84 260-344 (503)
53 KOG0313|consensus 99.6 2.2E-14 4.7E-19 77.6 7.4 85 1-85 302-392 (423)
54 KOG0649|consensus 99.6 1.3E-13 2.7E-18 71.6 9.8 79 2-80 117-196 (325)
55 KOG0274|consensus 99.6 1.1E-13 2.3E-18 79.2 10.4 84 2-86 252-335 (537)
56 KOG0302|consensus 99.6 3.2E-14 7E-19 77.1 7.7 84 2-85 260-350 (440)
57 KOG0645|consensus 99.6 2.5E-13 5.4E-18 71.1 10.6 83 2-84 108-197 (312)
58 KOG2394|consensus 99.6 1.7E-14 3.6E-19 81.0 6.6 85 1-85 292-377 (636)
59 PLN00181 protein SPA1-RELATED; 99.6 3.1E-13 6.7E-18 80.3 12.2 80 2-81 535-617 (793)
60 KOG0295|consensus 99.6 3.5E-14 7.7E-19 76.5 6.9 84 2-85 196-280 (406)
61 KOG0282|consensus 99.6 5.6E-15 1.2E-19 81.6 4.0 78 2-79 217-297 (503)
62 KOG0264|consensus 99.6 1.8E-13 3.8E-18 75.1 9.6 85 1-85 274-376 (422)
63 KOG1446|consensus 99.6 3.9E-13 8.4E-18 71.2 10.5 79 1-79 16-139 (311)
64 KOG0294|consensus 99.6 1.6E-13 3.5E-18 73.0 9.1 84 1-86 45-131 (362)
65 KOG0310|consensus 99.5 2.6E-14 5.6E-19 79.0 6.1 85 2-86 71-157 (487)
66 KOG0274|consensus 99.5 6.7E-14 1.4E-18 80.0 8.0 82 1-85 333-416 (537)
67 KOG0264|consensus 99.5 4.7E-14 1E-18 77.2 6.8 84 2-85 230-319 (422)
68 KOG0647|consensus 99.5 1.2E-13 2.5E-18 73.2 8.0 84 1-85 29-116 (347)
69 KOG0306|consensus 99.5 1.6E-13 3.4E-18 79.6 9.1 84 2-85 511-595 (888)
70 KOG0278|consensus 99.5 9.8E-14 2.1E-18 72.2 7.4 74 2-75 227-302 (334)
71 KOG0308|consensus 99.5 8.8E-14 1.9E-18 79.5 7.6 86 1-86 119-217 (735)
72 cd00200 WD40 WD40 domain, foun 99.5 2E-12 4.3E-17 67.6 11.9 85 1-85 95-180 (289)
73 KOG0306|consensus 99.5 5.9E-14 1.3E-18 81.3 6.3 85 1-85 552-637 (888)
74 PLN00181 protein SPA1-RELATED; 99.5 1.3E-12 2.8E-17 77.8 11.8 84 1-85 577-664 (793)
75 KOG0310|consensus 99.5 8.4E-13 1.8E-17 73.2 10.2 78 1-78 112-193 (487)
76 KOG0277|consensus 99.5 5.4E-13 1.2E-17 69.5 8.5 84 2-85 150-237 (311)
77 KOG0296|consensus 99.5 2.3E-12 5E-17 69.7 10.7 79 1-79 66-145 (399)
78 KOG0283|consensus 99.5 3.7E-13 8E-18 78.0 8.2 72 2-75 372-445 (712)
79 KOG0772|consensus 99.5 1.3E-13 2.9E-18 77.3 5.9 80 1-80 319-405 (641)
80 KOG0640|consensus 99.5 1.9E-13 4.1E-18 73.0 6.1 79 1-79 218-300 (430)
81 KOG0283|consensus 99.5 2.4E-13 5.2E-18 78.8 7.0 84 1-85 269-412 (712)
82 KOG0296|consensus 99.5 2.6E-12 5.6E-17 69.5 10.0 78 2-79 151-229 (399)
83 KOG1407|consensus 99.5 6E-13 1.3E-17 69.5 7.2 77 3-79 193-270 (313)
84 KOG0646|consensus 99.5 5.4E-13 1.2E-17 73.7 7.0 85 1-85 83-177 (476)
85 KOG0293|consensus 99.5 1.1E-12 2.3E-17 72.2 8.0 86 1-86 397-486 (519)
86 KOG0318|consensus 99.5 2.4E-12 5.3E-17 72.4 9.4 85 1-85 489-576 (603)
87 KOG0313|consensus 99.5 2.3E-12 5.1E-17 70.0 9.0 83 1-85 262-348 (423)
88 KOG0267|consensus 99.4 4.2E-14 9.2E-19 81.5 2.4 85 1-85 72-157 (825)
89 KOG1034|consensus 99.4 1.3E-12 2.8E-17 70.0 7.7 70 1-70 137-211 (385)
90 KOG0639|consensus 99.4 1.1E-13 2.3E-18 77.7 3.8 74 3-76 513-587 (705)
91 KOG1009|consensus 99.4 2.3E-12 5.1E-17 70.4 8.7 86 1-86 67-169 (434)
92 KOG0300|consensus 99.4 3.7E-13 7.9E-18 72.2 5.6 84 2-85 275-360 (481)
93 KOG0269|consensus 99.4 4.7E-13 1E-17 77.7 5.9 71 2-72 179-252 (839)
94 KOG0294|consensus 99.4 3.9E-12 8.4E-17 67.9 8.2 75 1-75 85-162 (362)
95 KOG0267|consensus 99.4 8.2E-13 1.8E-17 76.4 5.9 84 2-85 115-199 (825)
96 KOG0302|consensus 99.4 4.3E-12 9.3E-17 69.1 8.2 69 2-70 305-378 (440)
97 KOG0277|consensus 99.4 8.5E-12 1.8E-16 65.1 8.9 82 2-83 107-191 (311)
98 KOG3914|consensus 99.4 1.9E-12 4.1E-17 70.5 6.7 78 2-79 154-232 (390)
99 KOG0303|consensus 99.4 4.6E-12 1E-16 69.3 8.1 81 2-83 134-216 (472)
100 KOG0289|consensus 99.4 1.2E-11 2.7E-16 68.3 9.6 86 1-86 305-393 (506)
101 KOG0644|consensus 99.4 1.6E-13 3.4E-18 80.6 2.2 85 1-85 192-277 (1113)
102 KOG1446|consensus 99.4 7E-11 1.5E-15 62.9 11.5 79 2-80 190-272 (311)
103 KOG0299|consensus 99.4 4.8E-12 1E-16 70.0 7.3 85 1-85 144-247 (479)
104 KOG0639|consensus 99.4 3.6E-12 7.8E-17 71.8 6.7 85 1-85 467-554 (705)
105 KOG1274|consensus 99.4 8.6E-12 1.9E-16 73.6 8.4 79 1-79 98-177 (933)
106 KOG0640|consensus 99.4 4.6E-12 1E-16 67.9 6.6 81 1-81 263-346 (430)
107 KOG0303|consensus 99.4 3.8E-12 8.2E-17 69.7 6.2 84 1-85 83-176 (472)
108 KOG0305|consensus 99.4 9.6E-12 2.1E-16 70.2 7.8 85 1-85 219-346 (484)
109 KOG1034|consensus 99.4 1.1E-11 2.4E-16 66.5 7.4 75 11-85 105-184 (385)
110 KOG0278|consensus 99.3 1.6E-12 3.5E-17 67.8 4.0 78 2-79 103-182 (334)
111 KOG4283|consensus 99.3 2.3E-11 4.9E-16 64.9 8.0 83 2-85 104-191 (397)
112 KOG2111|consensus 99.3 8.7E-11 1.9E-15 62.9 9.9 71 1-71 183-257 (346)
113 KOG4283|consensus 99.3 4E-11 8.6E-16 64.0 8.3 79 4-82 148-232 (397)
114 KOG0293|consensus 99.3 2.8E-11 6.1E-16 66.8 7.5 78 2-79 227-308 (519)
115 KOG0643|consensus 99.3 5.1E-11 1.1E-15 62.7 8.0 78 2-79 150-229 (327)
116 KOG0269|consensus 99.3 9.8E-12 2.1E-16 72.5 5.9 85 1-85 135-223 (839)
117 KOG0771|consensus 99.3 1.1E-11 2.5E-16 67.8 5.7 76 3-79 148-224 (398)
118 KOG0641|consensus 99.3 5.9E-11 1.3E-15 61.5 8.0 78 9-86 192-277 (350)
119 KOG0646|consensus 99.3 2.5E-11 5.4E-16 67.3 6.9 79 1-79 219-316 (476)
120 KOG0305|consensus 99.3 5.1E-11 1.1E-15 67.4 8.2 78 2-79 304-385 (484)
121 KOG1445|consensus 99.3 3.6E-12 7.8E-17 73.6 3.5 84 2-85 630-723 (1012)
122 KOG0973|consensus 99.3 6.1E-11 1.3E-15 70.8 8.6 70 2-71 132-202 (942)
123 KOG0288|consensus 99.3 2.6E-12 5.6E-17 70.5 2.7 78 1-78 221-299 (459)
124 KOG0288|consensus 99.3 4.5E-11 9.8E-16 65.7 6.9 66 3-68 391-459 (459)
125 KOG0322|consensus 99.3 1.8E-11 3.9E-16 64.2 4.9 68 2-69 254-322 (323)
126 KOG1408|consensus 99.2 1E-11 2.3E-16 72.5 4.2 84 2-85 462-550 (1080)
127 KOG0301|consensus 99.2 5E-11 1.1E-15 68.9 6.8 81 1-85 142-222 (745)
128 KOG1408|consensus 99.2 2.3E-10 4.9E-15 67.2 8.9 84 2-85 599-686 (1080)
129 KOG1310|consensus 99.2 7.5E-11 1.6E-15 67.3 6.7 70 2-71 53-126 (758)
130 KOG1007|consensus 99.2 4.1E-11 8.9E-16 63.7 5.2 79 4-83 175-259 (370)
131 KOG1407|consensus 99.2 1.7E-10 3.6E-15 60.6 7.1 84 2-85 150-234 (313)
132 KOG0641|consensus 99.2 8.9E-10 1.9E-14 57.2 9.6 71 1-71 233-304 (350)
133 PF08662 eIF2A: Eukaryotic tra 99.2 1.9E-09 4.1E-14 55.2 10.8 73 2-77 103-185 (194)
134 KOG1539|consensus 99.2 3.9E-10 8.5E-15 66.5 9.1 67 1-68 578-646 (910)
135 KOG1539|consensus 99.2 3.8E-11 8.2E-16 70.6 5.0 77 2-78 537-614 (910)
136 KOG2110|consensus 99.2 1.1E-09 2.5E-14 59.6 10.1 71 1-71 175-249 (391)
137 KOG1036|consensus 99.2 6.6E-10 1.4E-14 59.3 8.8 74 1-76 56-130 (323)
138 PF00400 WD40: WD domain, G-be 99.2 3.2E-10 6.9E-15 43.6 5.8 37 32-68 2-39 (39)
139 KOG2445|consensus 99.2 6.8E-10 1.5E-14 59.5 8.7 68 2-69 16-90 (361)
140 KOG2048|consensus 99.2 3E-10 6.4E-15 65.6 7.8 85 1-85 156-248 (691)
141 KOG1332|consensus 99.2 1.3E-10 2.8E-15 60.6 5.6 81 5-85 17-105 (299)
142 KOG0301|consensus 99.2 1.8E-09 4E-14 62.7 10.5 74 2-79 182-256 (745)
143 KOG2394|consensus 99.2 4.6E-10 9.9E-15 63.8 7.7 47 2-48 335-381 (636)
144 PF08662 eIF2A: Eukaryotic tra 99.2 3.7E-09 7.9E-14 54.1 10.4 76 1-79 61-142 (194)
145 KOG3881|consensus 99.1 2.4E-10 5.2E-15 62.5 6.1 76 1-76 249-326 (412)
146 KOG0321|consensus 99.1 3.2E-10 6.8E-15 65.4 6.0 71 1-71 102-176 (720)
147 KOG1538|consensus 99.1 9.9E-10 2.2E-14 64.3 8.0 68 2-70 15-83 (1081)
148 KOG1445|consensus 99.1 8.7E-10 1.9E-14 64.2 7.3 82 2-83 131-214 (1012)
149 KOG0642|consensus 99.1 4.7E-10 1E-14 63.7 5.9 68 2-69 297-373 (577)
150 KOG0300|consensus 99.1 8.2E-10 1.8E-14 59.7 6.5 69 3-71 318-387 (481)
151 KOG2919|consensus 99.1 1.2E-09 2.6E-14 59.0 6.9 81 2-83 253-341 (406)
152 KOG2110|consensus 99.1 5.8E-09 1.3E-13 57.0 9.5 77 4-80 134-214 (391)
153 KOG1063|consensus 99.1 2.2E-09 4.8E-14 62.5 7.9 71 2-72 575-650 (764)
154 KOG1007|consensus 99.1 1.6E-09 3.5E-14 57.8 6.7 69 2-70 217-289 (370)
155 KOG1036|consensus 99.0 7.7E-09 1.7E-13 55.4 8.5 74 2-76 16-89 (323)
156 KOG0270|consensus 99.0 2.5E-09 5.4E-14 59.4 7.0 68 4-71 248-318 (463)
157 COG2319 FOG: WD40 repeat [Gene 99.0 4.9E-08 1.1E-12 53.3 11.6 83 2-84 158-244 (466)
158 KOG1272|consensus 99.0 6.6E-10 1.4E-14 62.2 4.1 74 5-78 257-331 (545)
159 KOG4547|consensus 99.0 1.5E-08 3.3E-13 57.9 9.5 83 2-86 105-188 (541)
160 TIGR03866 PQQ_ABC_repeats PQQ- 99.0 4E-08 8.8E-13 52.4 10.7 76 4-80 211-289 (300)
161 KOG0268|consensus 98.9 1.9E-09 4.1E-14 58.9 4.4 74 1-74 274-349 (433)
162 KOG1332|consensus 98.9 3.8E-09 8.3E-14 55.3 5.2 86 1-86 104-211 (299)
163 KOG2048|consensus 98.9 6.8E-08 1.5E-12 56.3 10.6 76 1-76 112-190 (691)
164 KOG2055|consensus 98.9 4.2E-08 9.1E-13 55.2 9.3 70 2-71 347-418 (514)
165 KOG0268|consensus 98.9 2.2E-09 4.8E-14 58.7 3.7 70 3-72 233-304 (433)
166 PF00400 WD40: WD domain, G-be 98.9 9E-09 2E-13 39.4 4.6 27 1-27 13-39 (39)
167 TIGR03866 PQQ_ABC_repeats PQQ- 98.9 2.4E-07 5.3E-12 49.4 11.2 77 2-79 33-112 (300)
168 KOG4378|consensus 98.9 3.7E-08 8.1E-13 56.1 7.6 84 1-85 210-296 (673)
169 KOG1273|consensus 98.9 1.3E-07 2.9E-12 51.3 9.4 50 1-51 67-117 (405)
170 KOG0290|consensus 98.9 1.2E-07 2.5E-12 51.0 9.0 75 1-75 152-232 (364)
171 KOG0290|consensus 98.8 4.8E-08 1E-12 52.4 7.4 70 2-71 199-319 (364)
172 KOG0322|consensus 98.8 1.1E-08 2.3E-13 54.2 4.7 86 1-86 207-297 (323)
173 KOG0772|consensus 98.8 2E-08 4.4E-13 57.2 5.9 70 2-71 271-348 (641)
174 KOG0974|consensus 98.8 5.6E-08 1.2E-12 58.7 7.9 78 2-82 178-257 (967)
175 KOG4328|consensus 98.8 3.4E-08 7.4E-13 55.4 6.6 69 2-70 325-399 (498)
176 KOG1274|consensus 98.8 3E-07 6.5E-12 55.4 10.1 70 2-71 191-263 (933)
177 PF02239 Cytochrom_D1: Cytochr 98.8 6.7E-07 1.5E-11 50.0 11.0 75 4-79 41-117 (369)
178 KOG2096|consensus 98.8 6.8E-08 1.5E-12 52.5 6.7 67 4-70 233-308 (420)
179 KOG2096|consensus 98.8 1.3E-07 2.7E-12 51.5 7.4 81 4-85 192-281 (420)
180 KOG0307|consensus 98.8 1.1E-08 2.3E-13 62.1 3.7 83 1-83 118-205 (1049)
181 KOG1334|consensus 98.8 4.9E-09 1.1E-13 59.2 2.1 65 7-71 402-467 (559)
182 KOG1009|consensus 98.7 1.1E-07 2.3E-12 52.8 7.0 70 1-70 15-95 (434)
183 KOG0270|consensus 98.7 4.1E-07 8.9E-12 51.0 9.0 84 1-85 288-376 (463)
184 KOG2695|consensus 98.7 2.2E-08 4.7E-13 54.7 4.1 79 4-83 257-345 (425)
185 KOG0642|consensus 98.7 7.1E-08 1.5E-12 55.2 6.2 82 2-83 492-574 (577)
186 KOG1063|consensus 98.7 1.5E-07 3.3E-12 55.2 7.6 69 2-70 528-602 (764)
187 KOG0321|consensus 98.7 1.1E-07 2.4E-12 55.4 6.7 75 11-85 64-147 (720)
188 KOG0307|consensus 98.7 9.4E-08 2E-12 58.3 6.6 79 2-80 209-294 (1049)
189 KOG2111|consensus 98.7 5.4E-07 1.2E-11 48.9 8.7 69 12-80 149-222 (346)
190 KOG0974|consensus 98.7 1.6E-07 3.5E-12 56.9 7.4 80 6-85 140-221 (967)
191 KOG2445|consensus 98.7 2E-07 4.4E-12 50.4 7.0 79 1-80 225-331 (361)
192 KOG0280|consensus 98.7 3.5E-07 7.5E-12 49.2 7.7 73 4-76 170-248 (339)
193 KOG2919|consensus 98.7 2E-07 4.4E-12 50.8 6.9 82 2-83 210-295 (406)
194 PF11768 DUF3312: Protein of u 98.7 5E-07 1.1E-11 52.1 8.8 69 2-72 262-331 (545)
195 KOG4328|consensus 98.7 3.2E-07 7E-12 51.7 7.8 72 1-72 188-267 (498)
196 KOG2106|consensus 98.7 9.1E-07 2E-11 50.7 9.5 69 1-69 449-520 (626)
197 KOG4227|consensus 98.7 3.3E-07 7.1E-12 51.3 7.6 78 2-79 59-144 (609)
198 KOG0649|consensus 98.7 4E-07 8.6E-12 48.1 7.3 83 1-86 64-160 (325)
199 KOG1963|consensus 98.7 4.6E-07 1E-11 54.1 8.3 72 2-73 208-284 (792)
200 KOG3881|consensus 98.7 7.5E-07 1.6E-11 49.4 8.5 85 1-85 204-293 (412)
201 KOG2139|consensus 98.7 8.7E-07 1.9E-11 49.0 8.5 70 1-70 197-268 (445)
202 KOG0650|consensus 98.6 1.9E-07 4.2E-12 54.2 6.1 46 34-79 393-439 (733)
203 KOG1524|consensus 98.6 8.2E-07 1.8E-11 51.4 8.5 80 1-82 147-227 (737)
204 KOG2055|consensus 98.6 8.9E-07 1.9E-11 50.1 8.2 76 4-80 308-384 (514)
205 KOG1188|consensus 98.6 3.5E-07 7.6E-12 50.0 6.2 61 12-72 41-104 (376)
206 KOG1523|consensus 98.6 1E-06 2.2E-11 47.9 7.9 70 1-70 12-85 (361)
207 KOG2321|consensus 98.6 9.7E-07 2.1E-11 51.3 8.1 76 2-77 178-265 (703)
208 COG2319 FOG: WD40 repeat [Gene 98.6 5.5E-06 1.2E-10 45.4 10.9 83 3-85 113-201 (466)
209 KOG2106|consensus 98.6 4E-06 8.7E-11 48.2 10.2 69 1-71 409-478 (626)
210 KOG0644|consensus 98.6 1.4E-08 3E-13 60.7 0.7 65 2-70 235-300 (1113)
211 KOG4227|consensus 98.5 2.1E-06 4.6E-11 48.2 8.2 72 2-73 108-182 (609)
212 KOG0280|consensus 98.5 3.1E-06 6.7E-11 45.7 8.3 82 3-84 125-212 (339)
213 KOG1310|consensus 98.5 1.5E-06 3.3E-11 50.5 7.1 63 9-71 634-697 (758)
214 KOG0650|consensus 98.5 2.5E-07 5.4E-12 53.8 4.0 83 2-85 569-653 (733)
215 KOG4378|consensus 98.4 7E-06 1.5E-10 47.3 8.7 82 2-83 124-209 (673)
216 KOG1523|consensus 98.4 4.2E-06 9.2E-11 45.6 7.3 72 1-72 57-132 (361)
217 KOG1963|consensus 98.4 4.8E-06 1E-10 50.0 7.5 70 1-71 253-323 (792)
218 KOG1587|consensus 98.4 1.1E-05 2.4E-10 47.4 8.5 71 1-71 244-324 (555)
219 KOG2695|consensus 98.4 2.2E-06 4.8E-11 47.2 5.4 77 3-79 302-385 (425)
220 KOG1409|consensus 98.3 3.9E-06 8.4E-11 46.2 5.9 72 1-72 199-272 (404)
221 KOG0771|consensus 98.3 1.1E-05 2.3E-10 45.2 7.3 70 2-71 284-355 (398)
222 KOG1272|consensus 98.3 3.1E-07 6.7E-12 52.0 1.4 85 2-86 212-297 (545)
223 KOG1240|consensus 98.3 2.4E-05 5.2E-10 49.2 9.0 68 4-71 1053-1129(1431)
224 KOG1538|consensus 98.3 7.4E-06 1.6E-10 48.9 6.7 67 3-70 226-293 (1081)
225 KOG4714|consensus 98.3 1E-06 2.3E-11 46.9 3.0 70 2-71 182-255 (319)
226 smart00320 WD40 WD40 repeats. 98.3 1.1E-05 2.3E-10 29.5 5.1 36 33-68 4-40 (40)
227 KOG1188|consensus 98.2 2E-05 4.3E-10 43.4 6.8 74 2-75 168-247 (376)
228 PRK05137 tolB translocation pr 98.2 0.00013 2.9E-09 41.8 10.2 73 2-75 204-283 (435)
229 PRK01742 tolB translocation pr 98.2 4.1E-05 9E-10 43.7 8.2 78 4-84 337-417 (429)
230 COG4946 Uncharacterized protei 98.2 0.00023 5.1E-09 41.3 10.6 75 2-76 404-483 (668)
231 PRK01742 tolB translocation pr 98.1 0.00011 2.4E-09 42.0 9.5 69 2-73 206-283 (429)
232 smart00320 WD40 WD40 repeats. 98.1 1.5E-05 3.2E-10 29.1 3.9 27 1-27 14-40 (40)
233 KOG1587|consensus 98.1 3.1E-05 6.8E-10 45.6 6.7 70 2-71 444-517 (555)
234 KOG1645|consensus 98.1 4.3E-05 9.4E-10 43.1 6.6 70 2-72 196-268 (463)
235 KOG1517|consensus 98.1 6.7E-05 1.5E-09 47.0 7.8 80 5-84 1171-1256(1387)
236 KOG1517|consensus 98.1 7.4E-05 1.6E-09 46.8 7.9 62 10-71 1220-1288(1387)
237 PRK11028 6-phosphogluconolacto 98.0 0.00031 6.7E-09 38.7 9.5 69 3-71 178-259 (330)
238 KOG2315|consensus 98.0 0.00022 4.7E-09 41.7 8.9 66 3-70 315-390 (566)
239 KOG4547|consensus 98.0 0.00011 2.4E-09 42.9 7.7 67 2-70 147-220 (541)
240 PRK03629 tolB translocation pr 98.0 0.00046 1E-08 39.6 9.9 76 2-78 201-283 (429)
241 PRK11028 6-phosphogluconolacto 98.0 0.00023 5E-09 39.2 8.4 66 4-70 232-304 (330)
242 PRK02889 tolB translocation pr 97.9 0.0005 1.1E-08 39.4 9.6 67 2-69 198-269 (427)
243 KOG4532|consensus 97.9 0.00053 1.1E-08 37.2 8.8 72 2-73 161-236 (344)
244 KOG1275|consensus 97.9 6.2E-05 1.3E-09 46.4 6.0 66 8-74 184-258 (1118)
245 PLN02919 haloacid dehalogenase 97.9 0.00047 1E-08 43.7 9.8 72 3-74 807-892 (1057)
246 PF12894 Apc4_WD40: Anaphase-p 97.9 0.00017 3.6E-09 28.9 5.1 28 1-28 13-40 (47)
247 PRK04922 tolB translocation pr 97.9 0.00037 7.9E-09 40.0 8.4 74 2-76 206-286 (433)
248 KOG1524|consensus 97.9 0.00012 2.5E-09 43.0 6.3 54 2-56 107-161 (737)
249 KOG1832|consensus 97.9 3.6E-05 7.8E-10 47.6 4.4 78 2-79 1104-1185(1516)
250 KOG2079|consensus 97.9 0.00024 5.3E-09 44.5 7.7 63 1-63 132-198 (1206)
251 KOG1240|consensus 97.9 0.00058 1.2E-08 43.6 9.3 80 1-80 1197-1283(1431)
252 PF02239 Cytochrom_D1: Cytochr 97.8 0.00091 2E-08 37.8 9.4 68 12-79 6-75 (369)
253 KOG1064|consensus 97.8 1.8E-05 3.9E-10 51.7 2.9 68 2-78 2339-2406(2439)
254 KOG4640|consensus 97.8 0.00076 1.6E-08 40.2 8.4 74 3-77 24-99 (665)
255 PRK03629 tolB translocation pr 97.8 0.0016 3.4E-08 37.5 9.6 79 3-84 334-419 (429)
256 TIGR02658 TTQ_MADH_Hv methylam 97.7 0.0018 3.9E-08 36.5 11.3 73 5-78 253-338 (352)
257 PRK00178 tolB translocation pr 97.7 0.0021 4.5E-08 36.9 9.9 73 2-75 201-280 (430)
258 KOG2321|consensus 97.7 0.00028 6.1E-09 41.7 6.3 75 5-79 139-214 (703)
259 PF14655 RAB3GAP2_N: Rab3 GTPa 97.7 0.0024 5.2E-08 36.8 9.8 79 2-80 310-408 (415)
260 KOG1064|consensus 97.7 4.8E-05 1E-09 49.8 3.1 41 38-78 2333-2374(2439)
261 KOG2041|consensus 97.7 0.0004 8.6E-09 42.4 6.5 71 2-72 17-103 (1189)
262 KOG1334|consensus 97.7 0.00023 4.9E-09 41.2 5.1 69 2-70 145-217 (559)
263 TIGR02800 propeller_TolB tol-p 97.6 0.003 6.5E-08 35.9 10.1 72 2-74 192-270 (417)
264 PRK04792 tolB translocation pr 97.6 0.0029 6.2E-08 36.7 9.3 73 2-75 220-299 (448)
265 KOG4497|consensus 97.6 0.0011 2.5E-08 37.0 7.3 72 2-74 321-395 (447)
266 PF15492 Nbas_N: Neuroblastoma 97.6 0.003 6.4E-08 34.4 8.8 39 41-79 229-268 (282)
267 PRK01029 tolB translocation pr 97.6 0.0042 9.1E-08 35.9 10.1 75 3-78 330-411 (428)
268 PRK02889 tolB translocation pr 97.4 0.0065 1.4E-07 35.0 9.4 73 3-76 287-366 (427)
269 KOG2315|consensus 97.4 0.0044 9.5E-08 36.6 8.4 77 1-80 272-354 (566)
270 TIGR02658 TTQ_MADH_Hv methylam 97.4 0.0061 1.3E-07 34.5 10.5 73 7-79 53-145 (352)
271 PRK01029 tolB translocation pr 97.4 0.006 1.3E-07 35.3 8.8 74 3-76 284-365 (428)
272 KOG4649|consensus 97.4 0.005 1.1E-07 33.6 7.8 68 11-79 63-132 (354)
273 KOG4532|consensus 97.4 0.0063 1.4E-07 33.3 9.6 75 4-78 208-290 (344)
274 KOG1409|consensus 97.4 0.0059 1.3E-07 34.4 8.1 72 14-85 168-243 (404)
275 PF15492 Nbas_N: Neuroblastoma 97.4 0.00082 1.8E-08 36.5 4.8 39 2-40 232-270 (282)
276 PRK05137 tolB translocation pr 97.4 0.0084 1.8E-07 34.6 9.5 71 3-74 249-326 (435)
277 KOG1354|consensus 97.4 0.0042 9.2E-08 35.0 7.4 70 2-72 275-361 (433)
278 PLN02919 haloacid dehalogenase 97.3 0.016 3.4E-07 37.3 11.2 74 3-76 743-839 (1057)
279 KOG4497|consensus 97.3 0.006 1.3E-07 34.3 7.9 71 4-74 53-126 (447)
280 PRK04922 tolB translocation pr 97.3 0.01 2.2E-07 34.3 10.4 72 3-75 295-373 (433)
281 KOG2139|consensus 97.3 0.006 1.3E-07 34.6 7.6 64 2-65 241-306 (445)
282 TIGR03300 assembly_YfgL outer 97.2 0.012 2.5E-07 33.3 8.3 72 10-82 278-350 (377)
283 KOG2314|consensus 97.1 0.0036 7.9E-08 37.2 5.9 74 3-79 214-299 (698)
284 KOG2079|consensus 97.1 0.002 4.3E-08 40.8 5.0 74 11-84 99-174 (1206)
285 TIGR02800 propeller_TolB tol-p 97.1 0.017 3.7E-07 33.0 10.1 70 4-74 282-358 (417)
286 KOG4190|consensus 97.1 0.00045 9.7E-09 41.0 2.0 53 34-86 728-788 (1034)
287 PRK00178 tolB translocation pr 97.0 0.022 4.7E-07 32.9 9.2 70 4-74 247-323 (430)
288 KOG4640|consensus 97.0 0.0026 5.6E-08 38.1 4.9 34 3-36 66-99 (665)
289 PF08553 VID27: VID27 cytoplas 97.0 0.0061 1.3E-07 37.9 6.5 61 4-66 582-644 (794)
290 KOG0309|consensus 97.0 0.00087 1.9E-08 41.0 3.0 70 3-72 162-234 (1081)
291 PF12894 Apc4_WD40: Anaphase-p 96.9 0.0064 1.4E-07 24.3 4.4 32 41-73 11-43 (47)
292 KOG3914|consensus 96.8 0.0059 1.3E-07 34.7 5.1 50 35-84 145-196 (390)
293 KOG1354|consensus 96.8 0.025 5.4E-07 32.1 7.3 70 2-71 28-117 (433)
294 KOG4190|consensus 96.8 0.0011 2.4E-08 39.5 2.2 75 2-76 879-954 (1034)
295 KOG1275|consensus 96.7 0.036 7.7E-07 35.2 7.8 75 10-85 146-220 (1118)
296 PF13360 PQQ_2: PQQ-like domai 96.7 0.023 4.9E-07 29.8 6.5 68 10-78 35-102 (238)
297 KOG3617|consensus 96.6 0.003 6.6E-08 39.6 3.3 69 2-70 62-131 (1416)
298 KOG1912|consensus 96.6 0.015 3.2E-07 36.3 5.7 80 4-85 20-112 (1062)
299 COG5354 Uncharacterized protei 96.6 0.026 5.5E-07 33.4 6.3 78 1-81 34-127 (561)
300 PF10313 DUF2415: Uncharacteri 96.4 0.015 3.2E-07 22.8 4.8 30 1-30 2-34 (43)
301 KOG4714|consensus 96.4 0.0019 4.2E-08 35.0 1.4 43 42-84 180-225 (319)
302 PRK04792 tolB translocation pr 96.4 0.08 1.7E-06 31.0 9.3 71 4-75 266-343 (448)
303 KOG0309|consensus 96.4 0.027 5.9E-07 35.1 6.0 84 2-85 117-204 (1081)
304 PF11715 Nup160: Nucleoporin N 96.2 0.12 2.6E-06 31.0 8.2 29 51-79 229-257 (547)
305 PF14783 BBS2_Mid: Ciliary BBS 96.1 0.05 1.1E-06 25.9 10.0 64 2-68 2-69 (111)
306 TIGR03300 assembly_YfgL outer 96.1 0.083 1.8E-06 30.0 6.9 58 10-67 319-376 (377)
307 PF10282 Lactonase: Lactonase, 96.1 0.11 2.4E-06 29.3 12.0 74 2-75 247-329 (345)
308 KOG2314|consensus 96.0 0.087 1.9E-06 31.9 6.6 60 3-62 496-559 (698)
309 PF04762 IKI3: IKI3 family; I 96.0 0.14 3E-06 32.9 7.8 69 3-73 213-291 (928)
310 COG4946 Uncharacterized protei 95.9 0.17 3.8E-06 30.2 10.1 69 5-74 365-435 (668)
311 PF07433 DUF1513: Protein of u 95.9 0.14 3E-06 28.7 9.3 73 5-77 56-153 (305)
312 KOG2395|consensus 95.8 0.042 9.1E-07 32.9 4.9 57 10-67 440-498 (644)
313 PF06433 Me-amine-dh_H: Methyl 95.7 0.17 3.7E-06 28.8 9.2 58 22-80 270-330 (342)
314 KOG0882|consensus 95.5 0.055 1.2E-06 31.8 4.6 79 1-79 146-240 (558)
315 KOG2444|consensus 95.5 0.078 1.7E-06 28.4 4.8 62 10-71 113-178 (238)
316 PF11768 DUF3312: Protein of u 95.5 0.044 9.5E-07 32.8 4.3 29 2-30 302-330 (545)
317 PF08450 SGL: SMP-30/Gluconola 95.4 0.18 3.8E-06 26.9 10.5 77 2-79 136-221 (246)
318 PRK04043 tolB translocation pr 95.3 0.3 6.5E-06 28.6 11.3 73 2-75 190-270 (419)
319 PRK02888 nitrous-oxide reducta 95.2 0.39 8.5E-06 29.7 8.1 68 3-71 324-405 (635)
320 KOG2066|consensus 95.2 0.19 4.1E-06 31.6 6.2 57 10-68 82-144 (846)
321 PF11715 Nup160: Nucleoporin N 95.1 0.21 4.5E-06 30.0 6.3 28 10-37 229-256 (547)
322 PF07569 Hira: TUP1-like enhan 95.1 0.24 5.3E-06 26.4 9.5 66 7-73 18-98 (219)
323 KOG2066|consensus 95.0 0.53 1.1E-05 29.9 8.6 76 1-79 114-196 (846)
324 PF14583 Pectate_lyase22: Olig 94.9 0.38 8.2E-06 28.0 7.3 71 6-76 42-116 (386)
325 KOG2444|consensus 94.9 0.26 5.6E-06 26.6 5.6 72 11-82 70-144 (238)
326 KOG3621|consensus 94.7 0.17 3.6E-06 31.4 5.1 69 3-71 80-155 (726)
327 KOG1912|consensus 94.7 0.24 5.3E-06 31.4 5.8 68 13-80 81-153 (1062)
328 COG5170 CDC55 Serine/threonine 94.7 0.38 8.3E-06 27.4 6.1 66 2-68 283-365 (460)
329 PRK11138 outer membrane biogen 94.2 0.59 1.3E-05 26.9 8.1 28 52-79 335-362 (394)
330 PF07433 DUF1513: Protein of u 93.8 0.65 1.4E-05 26.2 9.9 79 3-81 8-97 (305)
331 COG5170 CDC55 Serine/threonine 93.6 0.75 1.6E-05 26.3 6.3 71 2-72 29-119 (460)
332 PF10282 Lactonase: Lactonase, 93.5 0.78 1.7E-05 26.0 10.9 69 3-71 40-118 (345)
333 KOG2041|consensus 93.3 0.39 8.4E-06 30.4 4.8 68 2-69 74-144 (1189)
334 PF14655 RAB3GAP2_N: Rab3 GTPa 93.2 0.69 1.5E-05 27.3 5.6 42 42-83 308-350 (415)
335 KOG1832|consensus 93.2 0.34 7.4E-06 31.5 4.5 50 36-85 1096-1146(1516)
336 PF00780 CNH: CNH domain; Int 92.9 0.84 1.8E-05 24.8 7.4 61 8-71 4-65 (275)
337 KOG2114|consensus 92.8 1.7 3.7E-05 28.1 9.4 78 1-79 173-252 (933)
338 PRK11138 outer membrane biogen 92.5 1.2 2.7E-05 25.7 7.7 58 11-68 335-392 (394)
339 PF01436 NHL: NHL repeat; Int 92.3 0.25 5.4E-06 17.2 3.6 23 3-25 5-27 (28)
340 KOG3621|consensus 92.1 0.81 1.8E-05 28.7 5.1 67 5-71 39-107 (726)
341 KOG4649|consensus 92.1 1.3 2.7E-05 24.9 8.0 35 6-40 100-134 (354)
342 KOG1920|consensus 92.1 1.8 4E-05 29.0 6.7 65 4-69 200-273 (1265)
343 PRK04043 tolB translocation pr 91.8 1.7 3.6E-05 25.7 10.2 73 3-76 236-315 (419)
344 COG5167 VID27 Protein involved 91.8 1 2.3E-05 27.6 5.2 59 10-69 572-631 (776)
345 PRK02888 nitrous-oxide reducta 91.2 2.5 5.4E-05 26.5 8.4 52 21-73 296-354 (635)
346 PF13360 PQQ_2: PQQ-like domai 91.1 1.3 2.9E-05 23.3 11.2 64 10-77 173-237 (238)
347 KOG4499|consensus 91.1 1.6 3.5E-05 24.1 7.6 52 5-56 217-270 (310)
348 KOG1645|consensus 90.9 0.52 1.1E-05 27.7 3.3 47 35-81 187-235 (463)
349 PF07676 PD40: WD40-like Beta 90.5 0.52 1.1E-05 17.5 4.3 16 3-18 12-27 (39)
350 TIGR03075 PQQ_enz_alc_DH PQQ-d 90.5 2.7 5.8E-05 25.7 9.3 60 21-80 441-500 (527)
351 KOG0882|consensus 90.2 0.098 2.1E-06 30.9 0.2 63 10-72 19-86 (558)
352 PF02897 Peptidase_S9_N: Proly 90.1 2.4 5.3E-05 24.6 8.3 54 3-58 127-187 (414)
353 PF08596 Lgl_C: Lethal giant l 90.1 2.5 5.5E-05 24.8 7.2 69 1-70 88-173 (395)
354 smart00564 PQQ beta-propeller 90.0 0.52 1.1E-05 16.6 3.8 25 54-78 8-32 (33)
355 COG5354 Uncharacterized protei 89.6 3.3 7.1E-05 25.3 8.5 69 1-72 276-350 (561)
356 COG0823 TolB Periplasmic compo 89.5 2.6 5.7E-05 25.0 5.4 68 4-72 242-316 (425)
357 PF00930 DPPIV_N: Dipeptidyl p 89.4 2.7 5.8E-05 24.1 7.3 67 8-76 1-77 (353)
358 PF12234 Rav1p_C: RAVE protein 89.3 3.8 8.3E-05 25.8 9.0 59 10-68 40-102 (631)
359 KOG3616|consensus 89.2 3.1 6.7E-05 27.1 5.8 32 2-33 17-48 (1636)
360 cd00216 PQQ_DH Dehydrogenases 89.0 3.5 7.5E-05 24.8 7.4 69 12-80 62-138 (488)
361 PF04053 Coatomer_WDAD: Coatom 89.0 3.4 7.4E-05 24.7 6.7 55 11-69 117-172 (443)
362 PF07569 Hira: TUP1-like enhan 89.0 2 4.3E-05 23.1 4.4 27 50-76 20-46 (219)
363 PF10168 Nup88: Nuclear pore c 88.5 4.7 0.0001 25.8 10.5 71 2-72 87-181 (717)
364 TIGR02276 beta_rpt_yvtn 40-res 88.5 0.82 1.8E-05 17.0 5.5 31 9-39 1-32 (42)
365 KOG3617|consensus 88.2 1.3 2.9E-05 28.9 3.9 29 1-29 103-131 (1416)
366 PF01011 PQQ: PQQ enzyme repea 88.2 0.87 1.9E-05 16.9 3.8 26 55-80 3-28 (38)
367 PF08596 Lgl_C: Lethal giant l 88.1 3.8 8.2E-05 24.2 10.8 77 1-77 3-122 (395)
368 COG3386 Gluconolactonase [Carb 88.1 3.3 7.2E-05 23.5 10.2 78 3-81 166-253 (307)
369 KOG1920|consensus 87.5 7.1 0.00015 26.6 8.5 65 2-67 71-136 (1265)
370 KOG1916|consensus 87.2 0.6 1.3E-05 30.4 2.1 73 9-82 193-282 (1283)
371 PF04762 IKI3: IKI3 family; I 86.8 7.1 0.00015 25.9 10.6 66 2-68 78-148 (928)
372 KOG4499|consensus 86.5 4 8.6E-05 22.7 8.2 81 4-84 162-255 (310)
373 TIGR03074 PQQ_membr_DH membran 86.5 6.8 0.00015 25.4 8.8 68 11-79 260-353 (764)
374 PF04841 Vps16_N: Vps16, N-ter 84.9 6.1 0.00013 23.4 11.0 34 1-34 218-251 (410)
375 COG2706 3-carboxymuconate cycl 84.2 6.2 0.00013 22.9 9.4 69 2-71 147-222 (346)
376 KOG2114|consensus 83.6 10 0.00022 25.0 9.9 70 1-70 127-201 (933)
377 PHA02713 hypothetical protein; 83.0 6.2 0.00013 24.4 4.9 34 49-82 510-545 (557)
378 KOG2377|consensus 82.3 9.2 0.0002 23.5 7.1 29 1-29 68-96 (657)
379 COG0823 TolB Periplasmic compo 82.0 8.6 0.00019 23.0 6.8 67 5-73 287-361 (425)
380 COG3391 Uncharacterized conser 81.7 8.2 0.00018 22.5 10.0 71 3-74 119-194 (381)
381 PRK13616 lipoprotein LpqB; Pro 81.3 11 0.00024 23.7 6.6 60 3-66 400-472 (591)
382 PF14269 Arylsulfotran_2: Aryl 80.2 8.6 0.00019 21.8 7.6 39 2-40 146-184 (299)
383 PF13570 PQQ_3: PQQ-like domai 80.1 2.6 5.6E-05 15.7 3.5 19 11-29 21-39 (40)
384 PF06433 Me-amine-dh_H: Methyl 79.8 8.3 0.00018 22.5 4.4 38 2-39 291-330 (342)
385 PF14269 Arylsulfotran_2: Aryl 79.4 9.2 0.0002 21.7 5.0 38 44-81 146-184 (299)
386 PF04841 Vps16_N: Vps16, N-ter 78.6 11 0.00025 22.3 9.5 65 5-70 34-109 (410)
387 PF06977 SdiA-regulated: SdiA- 78.5 9.2 0.0002 21.1 8.8 67 2-69 24-93 (248)
388 PF14870 PSII_BNR: Photosynthe 78.1 10 0.00023 21.6 9.7 66 2-68 147-213 (302)
389 PF10584 Proteasome_A_N: Prote 77.3 0.77 1.7E-05 15.5 0.0 8 6-13 7-14 (23)
390 COG3490 Uncharacterized protei 76.9 12 0.00026 21.6 6.1 54 6-59 120-180 (366)
391 PF12657 TFIIIC_delta: Transcr 76.7 3.7 8E-05 21.0 2.4 22 3-26 8-29 (173)
392 COG2706 3-carboxymuconate cycl 75.6 14 0.0003 21.7 8.8 69 3-71 43-120 (346)
393 cd00216 PQQ_DH Dehydrogenases 75.5 16 0.00034 22.2 7.2 68 12-79 111-192 (488)
394 TIGR02608 delta_60_rpt delta-6 74.8 5.3 0.00012 16.6 3.1 17 2-18 3-19 (55)
395 KOG1916|consensus 74.4 8.2 0.00018 25.8 3.7 23 7-29 243-265 (1283)
396 KOG1900|consensus 74.4 27 0.00058 24.4 6.4 69 2-71 181-273 (1311)
397 PRK10115 protease 2; Provision 74.1 20 0.00044 23.0 6.0 68 2-72 129-209 (686)
398 KOG3630|consensus 73.1 28 0.00062 24.2 6.3 27 2-28 201-227 (1405)
399 PF08450 SGL: SMP-30/Gluconola 70.9 14 0.00031 19.8 11.3 69 3-76 3-74 (246)
400 KOG2727|consensus 69.9 6.1 0.00013 26.3 2.5 75 4-78 326-414 (1244)
401 PF03178 CPSF_A: CPSF A subuni 69.8 18 0.00038 20.5 6.8 64 2-69 91-156 (321)
402 TIGR02171 Fb_sc_TIGR02171 Fibr 69.6 31 0.00067 23.2 6.2 30 1-30 351-386 (912)
403 PF10168 Nup88: Nuclear pore c 69.5 28 0.00061 22.7 5.5 29 2-30 149-180 (717)
404 COG3204 Uncharacterized protei 68.3 21 0.00045 20.6 8.0 36 2-37 88-123 (316)
405 PF14761 HPS3_N: Hermansky-Pud 68.1 18 0.00038 19.7 6.6 46 13-59 30-78 (215)
406 KOG3522|consensus 66.5 34 0.00074 22.8 5.1 58 14-71 638-698 (925)
407 PF01731 Arylesterase: Arylest 66.5 12 0.00025 17.1 4.3 26 3-28 57-83 (86)
408 KOG1008|consensus 66.3 1.3 2.8E-05 27.8 -0.6 63 4-68 159-223 (783)
409 KOG3616|consensus 66.2 20 0.00044 23.8 4.1 30 42-71 15-45 (1636)
410 PF05096 Glu_cyclase_2: Glutam 65.3 23 0.00049 20.0 10.6 76 4-79 49-127 (264)
411 TIGR03075 PQQ_enz_alc_DH PQQ-d 65.2 31 0.00066 21.4 7.6 68 12-79 121-198 (527)
412 PF14783 BBS2_Mid: Ciliary BBS 62.2 17 0.00037 17.6 8.0 59 2-65 45-109 (111)
413 PF08728 CRT10: CRT10; InterP 61.6 43 0.00093 22.0 7.1 68 2-69 166-245 (717)
414 PF06977 SdiA-regulated: SdiA- 61.4 26 0.00057 19.4 7.5 34 2-36 173-207 (248)
415 PF14781 BBS2_N: Ciliary BBSom 60.3 21 0.00046 18.0 8.4 68 5-72 4-83 (136)
416 KOG2467|consensus 59.1 12 0.00027 22.3 2.3 21 51-71 340-360 (477)
417 TIGR03054 photo_alph_chp1 puta 58.6 23 0.00049 17.8 6.7 65 13-77 43-120 (135)
418 PF05694 SBP56: 56kDa selenium 57.9 42 0.00091 20.7 4.4 49 20-68 221-275 (461)
419 PF06739 SBBP: Beta-propeller 54.6 13 0.00029 13.9 3.4 20 2-21 15-34 (38)
420 KOG4460|consensus 53.7 57 0.0012 20.9 8.6 72 2-73 106-201 (741)
421 PRK13616 lipoprotein LpqB; Pro 52.9 58 0.0013 20.8 7.7 23 2-25 450-472 (591)
422 PF08801 Nucleoporin_N: Nup133 52.2 49 0.0011 19.7 5.4 29 2-30 192-220 (422)
423 PF12566 DUF3748: Protein of u 50.1 17 0.00037 17.7 1.6 22 6-27 74-95 (122)
424 PF14870 PSII_BNR: Photosynthe 50.0 49 0.0011 19.1 7.2 60 1-61 188-253 (302)
425 KOG0183|consensus 48.4 13 0.00029 20.3 1.2 11 6-16 10-20 (249)
426 PF04053 Coatomer_WDAD: Coatom 48.3 63 0.0014 19.8 7.4 27 52-79 117-143 (443)
427 TIGR03606 non_repeat_PQQ dehyd 45.6 72 0.0016 19.7 7.9 55 11-65 369-430 (454)
428 PF08553 VID27: VID27 cytoplas 45.4 93 0.002 20.9 7.0 60 12-71 494-561 (794)
429 PRK14751 tetracycline resistan 45.3 17 0.00037 12.5 1.1 10 60-69 13-22 (28)
430 PRK13684 Ycf48-like protein; P 45.1 61 0.0013 18.8 7.3 22 2-24 175-196 (334)
431 COG2133 Glucose/sorbosone dehy 43.3 75 0.0016 19.3 6.6 18 3-20 180-197 (399)
432 PF12341 DUF3639: Protein of u 43.1 20 0.00043 12.5 3.7 23 2-26 4-26 (27)
433 PF13418 Kelch_4: Galactose ox 42.7 24 0.00053 13.5 2.6 23 9-31 11-39 (49)
434 PF15644 Tox-PL: Papain fold t 39.3 47 0.001 15.7 2.7 22 11-32 88-109 (111)
435 COG4880 Secreted protein conta 39.2 97 0.0021 19.4 6.5 70 2-72 430-505 (603)
436 KOG4441|consensus 38.1 1.1E+02 0.0023 19.6 5.8 63 10-73 332-407 (571)
437 PF07995 GSDH: Glucose / Sorbo 38.1 82 0.0018 18.2 7.7 55 10-64 270-329 (331)
438 PF02870 Methyltransf_1N: 6-O- 36.8 42 0.00091 14.5 2.0 20 7-26 8-27 (77)
439 PF10214 Rrn6: RNA polymerase 36.1 1.3E+02 0.0028 20.0 7.2 27 2-28 148-175 (765)
440 COG1946 TesB Acyl-CoA thioeste 34.9 95 0.002 18.0 3.3 17 7-23 266-282 (289)
441 PF11635 Med16: Mediator compl 34.9 1.4E+02 0.003 19.9 6.4 34 2-35 262-295 (753)
442 PF14727 PHTB1_N: PTHB1 N-term 34.8 1.1E+02 0.0024 18.7 6.8 56 12-69 146-203 (418)
443 KOG1983|consensus 34.8 83 0.0018 21.7 3.4 26 8-33 243-268 (993)
444 PF09081 DUF1921: Domain of un 33.1 43 0.00093 13.5 1.6 10 59-68 42-51 (51)
445 KOG2377|consensus 32.5 1.3E+02 0.0029 19.0 8.8 35 36-70 61-96 (657)
446 KOG4305|consensus 32.4 1.2E+02 0.0025 21.2 3.6 27 55-81 964-990 (1029)
447 PF15390 DUF4613: Domain of un 32.3 1.5E+02 0.0032 19.4 7.8 32 40-71 154-187 (671)
448 COG4831 Roadblock/LC7 domain [ 31.5 43 0.00093 15.8 1.4 11 6-16 19-29 (109)
449 PF05935 Arylsulfotrans: Aryls 31.2 1.3E+02 0.0029 18.6 10.3 39 44-82 273-313 (477)
450 COG1520 FOG: WD40-like repeat 31.1 1.1E+02 0.0025 17.8 8.3 66 10-78 111-179 (370)
451 PF10647 Gmad1: Lipoprotein Lp 30.7 1E+02 0.0022 17.1 7.7 59 1-59 113-184 (253)
452 KOG2247|consensus 29.9 63 0.0014 20.4 2.2 51 6-56 124-175 (615)
453 PF00843 Arena_nucleocap: Aren 29.7 22 0.00048 21.7 0.4 17 17-33 148-164 (533)
454 cd01211 GAPCenA GAPCenA Phosph 29.6 83 0.0018 15.7 2.9 24 17-40 47-70 (125)
455 KOG1983|consensus 29.5 2E+02 0.0043 20.1 6.3 26 49-74 243-268 (993)
456 cd06919 Asp_decarbox Aspartate 28.5 83 0.0018 15.4 2.5 17 62-78 41-57 (111)
457 PF03178 CPSF_A: CPSF A subuni 28.1 1.2E+02 0.0027 17.2 7.8 61 10-70 138-202 (321)
458 PF10411 DsbC_N: Disulfide bon 27.8 58 0.0013 13.4 2.5 6 4-9 16-21 (57)
459 PF08954 DUF1900: Domain of un 27.8 92 0.002 15.7 2.3 24 49-72 19-43 (136)
460 KOG3950|consensus 27.4 1.3E+02 0.0028 17.2 4.7 22 42-63 260-282 (292)
461 PF07250 Glyoxal_oxid_N: Glyox 27.2 1.2E+02 0.0027 17.0 4.4 32 5-38 175-206 (243)
462 PF09142 TruB_C: tRNA Pseudour 26.0 65 0.0014 13.3 2.3 10 6-15 31-40 (56)
463 COG4993 Gcd Glucose dehydrogen 26.0 2.1E+02 0.0045 19.1 5.6 67 12-78 644-726 (773)
464 PF12768 Rax2: Cortical protei 25.7 1.4E+02 0.0031 17.1 6.4 55 19-73 14-75 (281)
465 PF11090 DUF2833: Protein of u 25.3 87 0.0019 14.5 3.4 24 4-27 2-26 (86)
466 PF09826 Beta_propel: Beta pro 25.3 1.9E+02 0.0041 18.4 6.8 30 9-39 20-52 (521)
467 smart00415 HSF heat shock fact 25.2 90 0.002 14.7 2.2 14 4-17 21-34 (105)
468 PRK05449 aspartate alpha-decar 24.9 1.1E+02 0.0023 15.4 2.5 17 62-78 42-58 (126)
469 PF13964 Kelch_6: Kelch motif 24.8 59 0.0013 12.5 2.4 12 10-21 11-22 (50)
470 COG3391 Uncharacterized conser 23.1 1.8E+02 0.0039 17.3 10.3 75 4-78 211-291 (381)
471 PF13645 YkuD_2: L,D-transpept 22.9 1.4E+02 0.003 16.0 3.2 24 18-41 46-70 (176)
472 COG5169 HSF1 Heat shock transc 22.7 1E+02 0.0022 17.8 2.0 16 4-19 29-44 (282)
473 PF10395 Utp8: Utp8 family; I 22.6 2.4E+02 0.0053 18.7 4.4 27 2-28 132-158 (670)
474 cd01272 FE65_N Fe65 Phosphotyr 22.1 1.3E+02 0.0028 15.3 5.8 47 10-56 51-97 (138)
475 COG3211 PhoX Predicted phospha 21.9 1.2E+02 0.0026 19.6 2.3 16 2-17 556-571 (616)
476 TIGR03074 PQQ_membr_DH membran 21.6 2.7E+02 0.0058 18.8 9.7 68 12-79 195-287 (764)
477 PF08309 LVIVD: LVIVD repeat; 21.0 75 0.0016 12.2 4.0 23 10-32 10-32 (42)
478 PF10210 MRP-S32: Mitochondria 20.5 1.2E+02 0.0026 14.4 2.5 11 5-15 6-16 (96)
479 PF00447 HSF_DNA-bind: HSF-typ 20.2 1.1E+02 0.0025 14.1 1.7 12 5-16 19-30 (103)
No 1
>KOG0271|consensus
Probab=99.86 E-value=2.4e-21 Score=104.21 Aligned_cols=85 Identities=26% Similarity=0.418 Sum_probs=79.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE-Eee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK-CNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~ 78 (86)
+|-|+.|+|+|..+++|+.|.++++||..+..+..++++|...|.|++ +|++..+++|+.|+.|++||.++|+++ ..+
T Consensus 117 ~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l 196 (480)
T KOG0271|consen 117 AVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRAL 196 (480)
T ss_pred cEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccc
Confidence 578999999999999999999999999999999999999999999999 999999999999999999999988766 678
Q ss_pred cCCCCCC
Q psy13945 79 QGPTEPV 85 (86)
Q Consensus 79 ~~~~~~v 85 (86)
.+|...|
T Consensus 197 ~gH~K~I 203 (480)
T KOG0271|consen 197 RGHKKWI 203 (480)
T ss_pred cCcccce
Confidence 8887665
No 2
>KOG0263|consensus
Probab=99.85 E-value=5.4e-21 Score=108.87 Aligned_cols=84 Identities=26% Similarity=0.529 Sum_probs=80.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|.|+.|+|+..++++|+.|.++++||..++.....+.+|..+|.++. +|+|..+++|+.|+.|.+||+..+..+..+.+
T Consensus 538 V~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~ 617 (707)
T KOG0263|consen 538 VDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKG 617 (707)
T ss_pred cceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhc
Confidence 56899999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|++.|
T Consensus 618 Ht~ti 622 (707)
T KOG0263|consen 618 HTGTI 622 (707)
T ss_pred ccCce
Confidence 97765
No 3
>KOG0266|consensus
Probab=99.84 E-value=1.3e-19 Score=101.46 Aligned_cols=85 Identities=26% Similarity=0.468 Sum_probs=79.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEc-cCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDL-RTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
.|..++|+||+.++++++.|.++++||+ ..+..+.++.+|...|+++. +|.+..+++++.|+++++||++++++...+
T Consensus 205 ~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l 284 (456)
T KOG0266|consen 205 GVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKL 284 (456)
T ss_pred ceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEee
Confidence 3789999999999999999999999999 45578899999999999999 999999999999999999999999999999
Q ss_pred cCCCCCC
Q psy13945 79 QGPTEPV 85 (86)
Q Consensus 79 ~~~~~~v 85 (86)
.+|.+.|
T Consensus 285 ~~hs~~i 291 (456)
T KOG0266|consen 285 KGHSDGI 291 (456)
T ss_pred eccCCce
Confidence 9999876
No 4
>KOG0272|consensus
Probab=99.83 E-value=3.4e-20 Score=100.44 Aligned_cols=85 Identities=28% Similarity=0.333 Sum_probs=81.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.|.+++|++||.++++|+.|..-+|||++++..+..+.+|..+|..+. +|+|..+++|+.|+++++||++....+..+-
T Consensus 305 ~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ip 384 (459)
T KOG0272|consen 305 GVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIP 384 (459)
T ss_pred ccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecc
Confidence 367999999999999999999999999999999999999999999999 9999999999999999999999998999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|++.|
T Consensus 385 AH~nlV 390 (459)
T KOG0272|consen 385 AHSNLV 390 (459)
T ss_pred cccchh
Confidence 998766
No 5
>KOG0271|consensus
Probab=99.81 E-value=2.2e-19 Score=96.86 Aligned_cols=84 Identities=32% Similarity=0.533 Sum_probs=80.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|..+.|+||+++|++++.|..|++||-++++.+..+++|-..|+.++ +.+.+++++++.|.++++|++++.+..+.+-+
T Consensus 370 Vn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpG 449 (480)
T KOG0271|consen 370 VNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPG 449 (480)
T ss_pred eeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCC
Confidence 67899999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|.+.|
T Consensus 450 h~DEV 454 (480)
T KOG0271|consen 450 HADEV 454 (480)
T ss_pred CCceE
Confidence 98776
No 6
>KOG0319|consensus
Probab=99.80 E-value=1.2e-18 Score=99.48 Aligned_cols=84 Identities=25% Similarity=0.380 Sum_probs=80.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|+|++++|+..+|++|+.|++.++|+++......++++|+..++++. ++..+.+++++.|.+|++|.+.+..|+++|.|
T Consensus 466 IN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eG 545 (775)
T KOG0319|consen 466 INCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEG 545 (775)
T ss_pred ccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecC
Confidence 78999999999999999999999999998889999999999999999 89999999999999999999999999999999
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|+..|
T Consensus 546 H~~aV 550 (775)
T KOG0319|consen 546 HTSAV 550 (775)
T ss_pred cccee
Confidence 99876
No 7
>KOG0266|consensus
Probab=99.79 E-value=9.2e-18 Score=94.20 Aligned_cols=83 Identities=30% Similarity=0.526 Sum_probs=76.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe--EEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS--LKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~ 77 (86)
+|++++|+|+++++++|+.|+++++||+.++++...+.+|.+.|.+++ .+++..+++++.|+.+++||+.++. +...
T Consensus 248 ~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 327 (456)
T KOG0266|consen 248 YVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKL 327 (456)
T ss_pred ceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeec
Confidence 478999999999999999999999999999999999999999999999 8999999999999999999999988 5677
Q ss_pred ecCCCC
Q psy13945 78 IQGPTE 83 (86)
Q Consensus 78 ~~~~~~ 83 (86)
+.++..
T Consensus 328 ~~~~~~ 333 (456)
T KOG0266|consen 328 LSGAEN 333 (456)
T ss_pred ccCCCC
Confidence 766544
No 8
>KOG0272|consensus
Probab=99.78 E-value=2.4e-19 Score=97.24 Aligned_cols=84 Identities=19% Similarity=0.339 Sum_probs=80.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|..++|+|+|+++.+++-|.+-++||+.++.++....+|...|++++ .++|..+++|+.|..-++||+++|.++-.+.+
T Consensus 264 Vs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~g 343 (459)
T KOG0272|consen 264 VSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAG 343 (459)
T ss_pred heeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecc
Confidence 66899999999999999999999999999999888899999999999 99999999999999999999999999999999
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|...|
T Consensus 344 H~k~I 348 (459)
T KOG0272|consen 344 HIKEI 348 (459)
T ss_pred cccce
Confidence 98776
No 9
>KOG0279|consensus
Probab=99.78 E-value=5.9e-18 Score=88.13 Aligned_cols=80 Identities=18% Similarity=0.332 Sum_probs=74.6
Q ss_pred CeeEEEECCC--CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSS--GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|+|+.|+|+ ...|++++.|+++++||+.+-+....+-+|++.+..+. +|||..+++|+.|+.+.+||++.++++..
T Consensus 150 WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lys 229 (315)
T KOG0279|consen 150 WVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYS 229 (315)
T ss_pred cEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEe
Confidence 4899999997 68899999999999999999999899999999999999 99999999999999999999999999888
Q ss_pred ecC
Q psy13945 78 IQG 80 (86)
Q Consensus 78 ~~~ 80 (86)
+.+
T Consensus 230 l~a 232 (315)
T KOG0279|consen 230 LEA 232 (315)
T ss_pred ccC
Confidence 753
No 10
>KOG0284|consensus
Probab=99.77 E-value=1.1e-18 Score=94.59 Aligned_cols=85 Identities=22% Similarity=0.359 Sum_probs=79.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.|++++|+|+...|++.++|+++++||....+....+++|..-|.+++ +|....+++++.|..|++||.+++.|+.++.
T Consensus 182 aIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh 261 (464)
T KOG0284|consen 182 AIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLH 261 (464)
T ss_pred hhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhh
Confidence 478999999999999999999999999998888888899999999999 9999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|.+.|
T Consensus 262 ~HKntV 267 (464)
T KOG0284|consen 262 GHKNTV 267 (464)
T ss_pred hccceE
Confidence 887654
No 11
>PTZ00421 coronin; Provisional
Probab=99.77 E-value=8.2e-17 Score=90.97 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=75.7
Q ss_pred CeeEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
.|.+++|+|++ ..+++++.|+++++||+.+++....+.+|...|.++. ++++..+++++.|+.|++||++++..+..+
T Consensus 127 ~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl 206 (493)
T PTZ00421 127 KVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSV 206 (493)
T ss_pred cEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEE
Confidence 37789999975 6899999999999999999988888888999999999 999999999999999999999999988888
Q ss_pred cCCCC
Q psy13945 79 QGPTE 83 (86)
Q Consensus 79 ~~~~~ 83 (86)
.+|..
T Consensus 207 ~~H~~ 211 (493)
T PTZ00421 207 EAHAS 211 (493)
T ss_pred ecCCC
Confidence 88764
No 12
>KOG0316|consensus
Probab=99.76 E-value=1.1e-17 Score=85.81 Aligned_cols=86 Identities=19% Similarity=0.420 Sum_probs=81.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|..+.|+-||++.++.+.|.++++|+...+..+.++.+|..+|..++ ..++..+++++.|..+.+||..+|+..+.++
T Consensus 19 aV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~r 98 (307)
T KOG0316|consen 19 AVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFR 98 (307)
T ss_pred ceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecc
Confidence 578899999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred CCCCCCC
Q psy13945 80 GPTEPVH 86 (86)
Q Consensus 80 ~~~~~v~ 86 (86)
+|...||
T Consensus 99 gH~aqVN 105 (307)
T KOG0316|consen 99 GHLAQVN 105 (307)
T ss_pred cccceee
Confidence 9988764
No 13
>PTZ00421 coronin; Provisional
Probab=99.76 E-value=6.7e-17 Score=91.33 Aligned_cols=85 Identities=13% Similarity=0.221 Sum_probs=74.4
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCC-------ceEEEEeCCccceEEEE-eCCC-CeEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTG-------TSLASWKGHEGEILQLV-TADD-GTLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~~-~~~~-~~~~~~~~~~~i~~~~~~ 70 (86)
+|.+++|+| +++++++++.|++|++||+.++ +.+..+.+|...|.++. +|++ ..+++++.|+.|++||++
T Consensus 77 ~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~ 156 (493)
T PTZ00421 77 PIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVE 156 (493)
T ss_pred CEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECC
Confidence 478999999 8899999999999999998754 24567888999999999 8875 689999999999999999
Q ss_pred CCeEEEeecCCCCCC
Q psy13945 71 DGSLKCNIQGPTEPV 85 (86)
Q Consensus 71 ~~~~~~~~~~~~~~v 85 (86)
++..+..+.+|.+.|
T Consensus 157 tg~~~~~l~~h~~~V 171 (493)
T PTZ00421 157 RGKAVEVIKCHSDQI 171 (493)
T ss_pred CCeEEEEEcCCCCce
Confidence 999998898887765
No 14
>KOG0292|consensus
Probab=99.76 E-value=9.4e-18 Score=98.04 Aligned_cols=85 Identities=18% Similarity=0.225 Sum_probs=81.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
||.+++|+|...++++|++|-.|++|+.+..+++.++.+|..-|..+. ++.-+|+++++.|.+|++|+..+++|+..+.
T Consensus 53 pVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavlt 132 (1202)
T KOG0292|consen 53 PVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLT 132 (1202)
T ss_pred ccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEe
Confidence 688999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
||.-.|
T Consensus 133 GHnHYV 138 (1202)
T KOG0292|consen 133 GHNHYV 138 (1202)
T ss_pred cCceEE
Confidence 997554
No 15
>KOG0286|consensus
Probab=99.75 E-value=8.1e-17 Score=84.54 Aligned_cols=85 Identities=21% Similarity=0.476 Sum_probs=77.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
++.|+.|-+| ..|++++.|.+.-+||+++++....+.+|.+-|.++. +| ++..+++|+.|...++||+|.+.+.+.|
T Consensus 147 ylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF 225 (343)
T KOG0286|consen 147 YLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTF 225 (343)
T ss_pred eeEEEEEcCC-CceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEee
Confidence 3678888874 5578889999999999999999999999999999999 88 8999999999999999999999999999
Q ss_pred cCCCCCCC
Q psy13945 79 QGPTEPVH 86 (86)
Q Consensus 79 ~~~~~~v~ 86 (86)
.+|.+.|+
T Consensus 226 ~ghesDIN 233 (343)
T KOG0286|consen 226 EGHESDIN 233 (343)
T ss_pred cccccccc
Confidence 99988764
No 16
>KOG0295|consensus
Probab=99.75 E-value=9e-17 Score=86.22 Aligned_cols=73 Identities=15% Similarity=0.282 Sum_probs=69.0
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCCCC
Q psy13945 12 SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQGPTEP 84 (86)
Q Consensus 12 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 84 (86)
+.+.+++.|+++++||+.++.++.++.+|...|..++ +|.|.+++++..|+++++||+++++|..++..|+.-
T Consensus 305 ~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hf 378 (406)
T KOG0295|consen 305 QVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHF 378 (406)
T ss_pred cEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcce
Confidence 5889999999999999999999999999999999999 999999999999999999999999999999887643
No 17
>KOG0319|consensus
Probab=99.74 E-value=3.6e-17 Score=93.60 Aligned_cols=84 Identities=18% Similarity=0.391 Sum_probs=79.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|.++.|++..+.+++++.|+++++|.+++..+++++.+|...|.... -.++..+++++.|+.+++|+++++.|..++..
T Consensus 508 vw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~ 587 (775)
T KOG0319|consen 508 VWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDA 587 (775)
T ss_pred eEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhh
Confidence 67999999999999999999999999999999999999999998888 67899999999999999999999999999999
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|.+.|
T Consensus 588 H~Drv 592 (775)
T KOG0319|consen 588 HNDRV 592 (775)
T ss_pred cccee
Confidence 98875
No 18
>KOG0265|consensus
Probab=99.73 E-value=1.3e-16 Score=83.89 Aligned_cols=85 Identities=25% Similarity=0.413 Sum_probs=75.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccC-CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRT-GTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|..+.|+|+|.++++|+.|..|.+|+... .+-.-.+++|.+.|..+. ..++..+++++.|.+++.||.++|++.+.++
T Consensus 50 I~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k 129 (338)
T KOG0265|consen 50 IYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHK 129 (338)
T ss_pred EEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhc
Confidence 67899999999999999999999999653 333566789999999999 9999999999999999999999999999999
Q ss_pred CCCCCCC
Q psy13945 80 GPTEPVH 86 (86)
Q Consensus 80 ~~~~~v~ 86 (86)
+|.+-|+
T Consensus 130 ~h~~~vN 136 (338)
T KOG0265|consen 130 GHTSFVN 136 (338)
T ss_pred cccceee
Confidence 9986553
No 19
>KOG0279|consensus
Probab=99.73 E-value=7.2e-17 Score=84.18 Aligned_cols=85 Identities=15% Similarity=0.253 Sum_probs=72.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC-ccceEEEE-eCC--CCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH-EGEILQLV-TAD--DGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~v~~~~-~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
|.+++|++|++.|++|++|.++.+|+............. .+.|.|+. +|+ ...+++++.|+++++||+++-+....
T Consensus 108 Vlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~ 187 (315)
T KOG0279|consen 108 VLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTT 187 (315)
T ss_pred eEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhc
Confidence 679999999999999999999999997755443333333 78899999 887 78899999999999999999998899
Q ss_pred ecCCCCCCC
Q psy13945 78 IQGPTEPVH 86 (86)
Q Consensus 78 ~~~~~~~v~ 86 (86)
+.+|+..++
T Consensus 188 ~~gh~~~v~ 196 (315)
T KOG0279|consen 188 FIGHSGYVN 196 (315)
T ss_pred cccccccEE
Confidence 999987653
No 20
>KOG0285|consensus
Probab=99.73 E-value=1.3e-16 Score=85.81 Aligned_cols=84 Identities=19% Similarity=0.400 Sum_probs=77.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|.|++.+|....++++++|.++++||+++...+..+.+|...|..+. .|....+++++.|.+|++||++.|+...++..
T Consensus 238 V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~ 317 (460)
T KOG0285|consen 238 VYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTH 317 (460)
T ss_pred eEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeec
Confidence 68999999999999999999999999999999999999999999999 88889999999999999999999988888877
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|...|
T Consensus 318 hkksv 322 (460)
T KOG0285|consen 318 HKKSV 322 (460)
T ss_pred cccee
Confidence 76544
No 21
>KOG0291|consensus
Probab=99.73 E-value=2.2e-16 Score=91.01 Aligned_cols=81 Identities=27% Similarity=0.423 Sum_probs=76.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.+++++++|||+++++|++|+.|++||...+-+..++..|+..|+.+. +..+..+++.+.|++++.||+..+++.++|.
T Consensus 352 ~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft 431 (893)
T KOG0291|consen 352 RITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFT 431 (893)
T ss_pred ceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeec
Confidence 368999999999999999999999999999999999999999999999 8999999999999999999999998888886
Q ss_pred CC
Q psy13945 80 GP 81 (86)
Q Consensus 80 ~~ 81 (86)
..
T Consensus 432 ~P 433 (893)
T KOG0291|consen 432 SP 433 (893)
T ss_pred CC
Confidence 54
No 22
>KOG0263|consensus
Probab=99.73 E-value=3.1e-17 Score=93.94 Aligned_cols=85 Identities=16% Similarity=0.290 Sum_probs=81.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
||..+.|+|-|-+|++++.|++-++|......++..+.+|..-|.|+. +|+..++++|+.|.++++||..+|..++.|.
T Consensus 495 PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~ 574 (707)
T KOG0263|consen 495 PVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFT 574 (707)
T ss_pred ceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEec
Confidence 688999999999999999999999999998888889999999999999 9999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
||.+.|
T Consensus 575 GH~~~V 580 (707)
T KOG0263|consen 575 GHKGPV 580 (707)
T ss_pred CCCCce
Confidence 999876
No 23
>KOG0285|consensus
Probab=99.72 E-value=3.6e-17 Score=87.94 Aligned_cols=85 Identities=22% Similarity=0.405 Sum_probs=79.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.|+++.|.++.|++|+.|+++.+||+.+++...++.+|...|..++ ++-..++.+++.|+++++||++..+.++.+.
T Consensus 153 WVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~Yh 232 (460)
T KOG0285|consen 153 WVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYH 232 (460)
T ss_pred eEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhc
Confidence 588999999999999999999999999999999999999999999999 9999999999999999999999999888888
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|-+.|
T Consensus 233 GHlS~V 238 (460)
T KOG0285|consen 233 GHLSGV 238 (460)
T ss_pred ccccee
Confidence 887665
No 24
>KOG0276|consensus
Probab=99.72 E-value=1.5e-17 Score=94.22 Aligned_cols=86 Identities=21% Similarity=0.234 Sum_probs=77.6
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-e--CCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-T--ADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~--~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
+|.+++|+| |.+.+++++.|+++++|.+....+-.++.+|...|.|+. - ++.+.+++|+.|.++++||+++..|++
T Consensus 142 yVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~ 221 (794)
T KOG0276|consen 142 YVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQ 221 (794)
T ss_pred EEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHH
Confidence 378999999 557899999999999999988888889999999999998 4 467799999999999999999999999
Q ss_pred eecCCCCCCC
Q psy13945 77 NIQGPTEPVH 86 (86)
Q Consensus 77 ~~~~~~~~v~ 86 (86)
++.||...|+
T Consensus 222 TLeGHt~Nvs 231 (794)
T KOG0276|consen 222 TLEGHTNNVS 231 (794)
T ss_pred Hhhcccccce
Confidence 9999988763
No 25
>KOG0318|consensus
Probab=99.72 E-value=4.1e-16 Score=86.97 Aligned_cols=78 Identities=27% Similarity=0.517 Sum_probs=73.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe---CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK---GHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
|.|+.|+|||.++++.+.|+++.+||-.+++.+..+. +|++.|+.+. +|++..+++.+.|.++++||..++.+.++
T Consensus 193 V~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t 272 (603)
T KOG0318|consen 193 VNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVST 272 (603)
T ss_pred eeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEE
Confidence 6899999999999999999999999999999988887 8999999999 99999999999999999999999888877
Q ss_pred ec
Q psy13945 78 IQ 79 (86)
Q Consensus 78 ~~ 79 (86)
+.
T Consensus 273 ~~ 274 (603)
T KOG0318|consen 273 WP 274 (603)
T ss_pred ee
Confidence 64
No 26
>KOG0275|consensus
Probab=99.71 E-value=2.1e-18 Score=92.03 Aligned_cols=86 Identities=23% Similarity=0.419 Sum_probs=81.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe-CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK-GHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|.|+.|+.|.+.+++|+.||.+++|.+.++.++.++. +|...|.++. +.++..+++++.|.++++..+..|+++..|
T Consensus 265 aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEf 344 (508)
T KOG0275|consen 265 AVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEF 344 (508)
T ss_pred ceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHh
Confidence 57899999999999999999999999999999998886 7999999999 899999999999999999999999999999
Q ss_pred cCCCCCCC
Q psy13945 79 QGPTEPVH 86 (86)
Q Consensus 79 ~~~~~~v~ 86 (86)
++|++.|+
T Consensus 345 rGHsSyvn 352 (508)
T KOG0275|consen 345 RGHSSYVN 352 (508)
T ss_pred cCcccccc
Confidence 99998874
No 27
>KOG0308|consensus
Probab=99.71 E-value=2.2e-16 Score=89.67 Aligned_cols=85 Identities=27% Similarity=0.356 Sum_probs=79.8
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++.++.|..|++|+..+.+++||-.+++.+..+++|...|..+. ..++..+++++.|++|++||+.+.+|+.++.
T Consensus 173 siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~ 252 (735)
T KOG0308|consen 173 SIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYI 252 (735)
T ss_pred ceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEE
Confidence 467889999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
.|.+.|
T Consensus 253 vH~e~V 258 (735)
T KOG0308|consen 253 VHKEGV 258 (735)
T ss_pred eccCce
Confidence 998764
No 28
>PTZ00420 coronin; Provisional
Probab=99.70 E-value=2.5e-15 Score=86.00 Aligned_cols=83 Identities=6% Similarity=0.071 Sum_probs=72.0
Q ss_pred CeeEEEECCCCCE-EEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSW-IAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
.|.+++|+|++.. +++++.|+++++||+.+++....+. +...|.++. ++++..+++++.|+.+++||++++..+..+
T Consensus 127 ~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl 205 (568)
T PTZ00420 127 KISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSF 205 (568)
T ss_pred cEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 3789999998875 5688999999999999888766655 457799999 999999999999999999999999999989
Q ss_pred cCCCCC
Q psy13945 79 QGPTEP 84 (86)
Q Consensus 79 ~~~~~~ 84 (86)
.+|.+.
T Consensus 206 ~gH~g~ 211 (568)
T PTZ00420 206 HIHDGG 211 (568)
T ss_pred ecccCC
Confidence 888754
No 29
>KOG0315|consensus
Probab=99.67 E-value=4.2e-15 Score=76.97 Aligned_cols=82 Identities=18% Similarity=0.222 Sum_probs=73.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCC-ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTG-TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+..+.+|||+.++++.+.|.++++|+.++. +....+.+|+..++... +.++.++++++.|++.++|+++.++.+....
T Consensus 218 il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~ 297 (311)
T KOG0315|consen 218 ILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQ 297 (311)
T ss_pred EEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecC
Confidence 567889999999999999999999999877 55677788998999888 8999999999999999999999999999888
Q ss_pred CCCC
Q psy13945 80 GPTE 83 (86)
Q Consensus 80 ~~~~ 83 (86)
+|..
T Consensus 298 gh~K 301 (311)
T KOG0315|consen 298 GHHK 301 (311)
T ss_pred Cccc
Confidence 8753
No 30
>KOG0292|consensus
Probab=99.66 E-value=1.4e-16 Score=93.36 Aligned_cols=85 Identities=21% Similarity=0.404 Sum_probs=80.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+.+++|+|..+.++++-..|.|.+||.+=+..+.++..|.++|..+. +|..+.+++|+.|..|++|++.+.+|++++.+
T Consensus 12 vKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~G 91 (1202)
T KOG0292|consen 12 VKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLG 91 (1202)
T ss_pred ccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhcc
Confidence 56899999999999999999999999998888999999999999999 99999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 81 PTEPVH 86 (86)
Q Consensus 81 ~~~~v~ 86 (86)
|-+.||
T Consensus 92 HlDYVR 97 (1202)
T KOG0292|consen 92 HLDYVR 97 (1202)
T ss_pred ccceeE
Confidence 988874
No 31
>KOG0289|consensus
Probab=99.66 E-value=1.2e-15 Score=83.59 Aligned_cols=77 Identities=21% Similarity=0.356 Sum_probs=71.0
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+++.+|+|||-.+.+|..|+.+++||++.......|.+|.++|..++ +.+|-++++++.|+.+++||+|..+.++++
T Consensus 350 ~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~ 427 (506)
T KOG0289|consen 350 YTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTI 427 (506)
T ss_pred eEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhccccee
Confidence 67899999999999999999999999999998999999999999999 889999999999999999999977655554
No 32
>KOG0273|consensus
Probab=99.65 E-value=3.4e-15 Score=82.43 Aligned_cols=85 Identities=22% Similarity=0.386 Sum_probs=77.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC---------CCeEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD---------DGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~---------~~~~~~~~~~~~i~~~~~~ 70 (86)
+|.++.|.|.+.++++++.|+++++|..........+.+|.+.|+.+. +|. +..+++++.|+++++||+.
T Consensus 361 ~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~ 440 (524)
T KOG0273|consen 361 EVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVE 440 (524)
T ss_pred ceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEcc
Confidence 478999999999999999999999999888888888999999999888 764 3468999999999999999
Q ss_pred CCeEEEeecCCCCCC
Q psy13945 71 DGSLKCNIQGPTEPV 85 (86)
Q Consensus 71 ~~~~~~~~~~~~~~v 85 (86)
.+.+++.|..|+.+|
T Consensus 441 ~gv~i~~f~kH~~pV 455 (524)
T KOG0273|consen 441 SGVPIHTLMKHQEPV 455 (524)
T ss_pred CCceeEeeccCCCce
Confidence 999999999999877
No 33
>KOG0275|consensus
Probab=99.65 E-value=8.4e-17 Score=86.05 Aligned_cols=84 Identities=21% Similarity=0.410 Sum_probs=72.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE--------EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA--------SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+.|..|+|||+++++|+-||.+-+|+..+++... .+.-+...|.|+. +.+..++++|+.|+.|++|.+++|
T Consensus 216 ~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG 295 (508)
T KOG0275|consen 216 VECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETG 295 (508)
T ss_pred hhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecc
Confidence 4688999999999999999999999998877633 3344567899999 899999999999999999999999
Q ss_pred eEEEeec-CCCCCC
Q psy13945 73 SLKCNIQ-GPTEPV 85 (86)
Q Consensus 73 ~~~~~~~-~~~~~v 85 (86)
.|+..|. +|+..|
T Consensus 296 ~ClRrFdrAHtkGv 309 (508)
T KOG0275|consen 296 QCLRRFDRAHTKGV 309 (508)
T ss_pred hHHHHhhhhhccCe
Confidence 9999886 777655
No 34
>KOG0291|consensus
Probab=99.64 E-value=7.2e-15 Score=84.96 Aligned_cols=85 Identities=24% Similarity=0.434 Sum_probs=76.8
Q ss_pred CeeEEEECCCCCEEEEEeCC-CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQAS-GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|..++|+..|..++.|+.. |.+.||+.....-+.+.++|...+.+++ +||++.+++|+.|++|++||.+.+.|+.+|
T Consensus 309 ~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTF 388 (893)
T KOG0291|consen 309 KILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTF 388 (893)
T ss_pred eeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEe
Confidence 46788898889888877654 7999999988888888899999999999 999999999999999999999999999999
Q ss_pred cCCCCCC
Q psy13945 79 QGPTEPV 85 (86)
Q Consensus 79 ~~~~~~v 85 (86)
..|++.|
T Consensus 389 teHts~V 395 (893)
T KOG0291|consen 389 TEHTSGV 395 (893)
T ss_pred ccCCCce
Confidence 9999876
No 35
>KOG0643|consensus
Probab=99.64 E-value=1.1e-14 Score=76.02 Aligned_cols=79 Identities=22% Similarity=0.294 Sum_probs=75.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|++.+.|+.+|-++++.+.|.+..+|-..+++.+.++.+|.+.|++++ ..+...+++|+.|.++++||..+|+++..+.
T Consensus 12 plTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k 91 (327)
T KOG0643|consen 12 PLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWK 91 (327)
T ss_pred ccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEee
Confidence 678999999999999999999999999889999999999999999999 8999999999999999999999999887765
No 36
>KOG0265|consensus
Probab=99.64 E-value=2.7e-15 Score=79.10 Aligned_cols=78 Identities=19% Similarity=0.182 Sum_probs=68.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|..+.|.+|++.+++.+.|++++.||..+++.+.++++|...+.++. .. ...++.+++.|+++++||+|+..+++++
T Consensus 92 AVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~ 171 (338)
T KOG0265|consen 92 AVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF 171 (338)
T ss_pred eeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcc
Confidence 478899999999999999999999999999999999999999998887 44 3445568899999999999977666655
No 37
>KOG0284|consensus
Probab=99.63 E-value=2.4e-16 Score=85.68 Aligned_cols=84 Identities=21% Similarity=0.371 Sum_probs=77.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|.+++|+|...++++++.|..|++||.+++.++.++.+|+..|..+. .+++.++++++.|..++++|+++-+-++.+++
T Consensus 225 VksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~ 304 (464)
T KOG0284|consen 225 VKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRG 304 (464)
T ss_pred cceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhc
Confidence 67999999999999999999999999999999999999999999999 89999999999999999999997777788888
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|...|
T Consensus 305 Hkkdv 309 (464)
T KOG0284|consen 305 HKKDV 309 (464)
T ss_pred chhhh
Confidence 87654
No 38
>KOG1273|consensus
Probab=99.63 E-value=3e-15 Score=79.67 Aligned_cols=77 Identities=29% Similarity=0.406 Sum_probs=72.8
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.|+.|++.|.+++.|..+|.+.+||..+......+.+|-.+|.++. +++++.+++++.|..+.+||+..|.+++.++
T Consensus 27 ~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 27 ECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred ceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE
Confidence 5899999999999999999999999999888888999999999999 9999999999999999999999998887765
No 39
>KOG0286|consensus
Probab=99.63 E-value=1.1e-14 Score=76.70 Aligned_cols=78 Identities=18% Similarity=0.299 Sum_probs=73.1
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|.+++++| +++.+++|+.|+..++||++.+...+.|.+|..-|.++. +|++.-+++|+.|++.++||+|....+..+.
T Consensus 189 V~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys 268 (343)
T KOG0286|consen 189 VMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYS 268 (343)
T ss_pred EEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeec
Confidence 67899999 899999999999999999999999999999999999999 9999999999999999999999887777665
No 40
>PTZ00420 coronin; Provisional
Probab=99.62 E-value=5.8e-14 Score=80.56 Aligned_cols=79 Identities=15% Similarity=0.233 Sum_probs=65.7
Q ss_pred CeeEEEECCC-CCEEEEEeCCCeEEEEEccCCc--------eEEEEeCCccceEEEE-eCCCCe-EEEEeCCCCEEEEeC
Q psy13945 1 LIRCIAVSSS-GSWIAIGQASGVLTLLDLRTGT--------SLASWKGHEGEILQLV-TADDGT-LISSSLDQTISAWHT 69 (86)
Q Consensus 1 ~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~v~~~~-~~~~~~-~~~~~~~~~i~~~~~ 69 (86)
+|.+++|+|+ +.++++++.|+++++||+.++. ....+.+|...|.++. +|++.. +++++.|+.+++||+
T Consensus 76 ~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl 155 (568)
T PTZ00420 76 SILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDI 155 (568)
T ss_pred CEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEEC
Confidence 4789999996 7899999999999999987532 2345678999999999 998765 468999999999999
Q ss_pred CCCeEEEeec
Q psy13945 70 NDGSLKCNIQ 79 (86)
Q Consensus 70 ~~~~~~~~~~ 79 (86)
++++....+.
T Consensus 156 ~tg~~~~~i~ 165 (568)
T PTZ00420 156 ENEKRAFQIN 165 (568)
T ss_pred CCCcEEEEEe
Confidence 9887666554
No 41
>KOG0281|consensus
Probab=99.62 E-value=5.2e-16 Score=83.56 Aligned_cols=82 Identities=21% Similarity=0.315 Sum_probs=71.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
|+.+.| |.++|++++.|.++++|+..+++.+.++.+|+-.|.|+. ..+..+++|+.|.+|++||+..|.|+..++||
T Consensus 323 VNvVdf--d~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQ-Yr~rlvVSGSSDntIRlwdi~~G~cLRvLeGH 399 (499)
T KOG0281|consen 323 VNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ-YRDRLVVSGSSDNTIRLWDIECGACLRVLEGH 399 (499)
T ss_pred eeeecc--ccceEEEecCCceEEEEeccceeeehhhhcccccceehh-ccCeEEEecCCCceEEEEeccccHHHHHHhch
Confidence 455555 567999999999999999999999999999988887764 45788999999999999999999999999999
Q ss_pred CCCCC
Q psy13945 82 TEPVH 86 (86)
Q Consensus 82 ~~~v~ 86 (86)
.+-|+
T Consensus 400 EeLvR 404 (499)
T KOG0281|consen 400 EELVR 404 (499)
T ss_pred HHhhh
Confidence 87653
No 42
>KOG0273|consensus
Probab=99.61 E-value=1.4e-14 Score=80.07 Aligned_cols=82 Identities=20% Similarity=0.441 Sum_probs=75.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|++++|+.+|.++++|..+|.+++|+ ..+..+.++..|+++|.++. ...+.++++++-|+++.+||..++...+.+.-
T Consensus 238 VT~L~Wn~~G~~LatG~~~G~~riw~-~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~ 316 (524)
T KOG0273|consen 238 VTSLDWNNDGTLLATGSEDGEARIWN-KDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEF 316 (524)
T ss_pred cceEEecCCCCeEEEeecCcEEEEEe-cCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeee
Confidence 78999999999999999999999999 56888888889999999999 99999999999999999999999999888887
Q ss_pred CCCC
Q psy13945 81 PTEP 84 (86)
Q Consensus 81 ~~~~ 84 (86)
|+.+
T Consensus 317 ~s~~ 320 (524)
T KOG0273|consen 317 HSAP 320 (524)
T ss_pred ccCC
Confidence 7654
No 43
>KOG0281|consensus
Probab=99.61 E-value=7e-16 Score=83.08 Aligned_cols=81 Identities=25% Similarity=0.412 Sum_probs=70.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
|.|+.+ |...+++|..|.++++||..+......+.+|.+.|.|+. .+.+.+++|+.|.++++||.++++++.++.+|
T Consensus 200 VYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLq-yd~rviisGSSDsTvrvWDv~tge~l~tlihH 276 (499)
T KOG0281|consen 200 VYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQ-YDERVIVSGSSDSTVRVWDVNTGEPLNTLIHH 276 (499)
T ss_pred eEEEEe--cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeee-ccceEEEecCCCceEEEEeccCCchhhHHhhh
Confidence 345544 678899999999999999998888999999999999986 34559999999999999999999999999988
Q ss_pred CCCC
Q psy13945 82 TEPV 85 (86)
Q Consensus 82 ~~~v 85 (86)
.+.|
T Consensus 277 ceaV 280 (499)
T KOG0281|consen 277 CEAV 280 (499)
T ss_pred ccee
Confidence 8765
No 44
>KOG0299|consensus
Probab=99.60 E-value=2.8e-15 Score=82.40 Aligned_cols=84 Identities=27% Similarity=0.434 Sum_probs=77.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+.+++.++||+++++|+.+..+.+|+..+.+.+..+.+|.+.|.++. ......+++++.|..+++|++.....+.++.+
T Consensus 205 il~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyG 284 (479)
T KOG0299|consen 205 ILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYG 284 (479)
T ss_pred eEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhC
Confidence 56899999999999999999999999999999999999999999999 67777889999999999999998888888889
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|++.|
T Consensus 285 Hqd~v 289 (479)
T KOG0299|consen 285 HQDGV 289 (479)
T ss_pred Cccce
Confidence 98765
No 45
>KOG0316|consensus
Probab=99.60 E-value=8.8e-15 Score=75.40 Aligned_cols=82 Identities=17% Similarity=0.268 Sum_probs=71.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC--eEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG--SLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~ 78 (86)
|..++.+.|+..+++++.|..+.+||..++++..++++|..+|..+. ..+...+++++.|..+++||.+.. ++++.+
T Consensus 62 VlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQil 141 (307)
T KOG0316|consen 62 VLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQIL 141 (307)
T ss_pred eeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchh
Confidence 45667788999999999999999999999999999999999999999 888999999999999999999864 577766
Q ss_pred cCCCC
Q psy13945 79 QGPTE 83 (86)
Q Consensus 79 ~~~~~ 83 (86)
....+
T Consensus 142 dea~D 146 (307)
T KOG0316|consen 142 DEAKD 146 (307)
T ss_pred hhhcC
Confidence 54433
No 46
>KOG0276|consensus
Probab=99.60 E-value=3.4e-14 Score=81.09 Aligned_cols=86 Identities=24% Similarity=0.413 Sum_probs=78.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCc-eEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGT-SLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|.+++.+|..++++++++|-+|++||.+... +.+++.+|..-|.++. .| +...+++++.|+++++|.+-+..+.++
T Consensus 99 yIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfT 178 (794)
T KOG0276|consen 99 YIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFT 178 (794)
T ss_pred ceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCcee
Confidence 47899999999999999999999999998654 4688999999999999 66 688999999999999999999999999
Q ss_pred ecCCCCCCC
Q psy13945 78 IQGPTEPVH 86 (86)
Q Consensus 78 ~~~~~~~v~ 86 (86)
+.+|...|+
T Consensus 179 l~gHekGVN 187 (794)
T KOG0276|consen 179 LEGHEKGVN 187 (794)
T ss_pred eeccccCcc
Confidence 999998875
No 47
>KOG0647|consensus
Probab=99.59 E-value=5.2e-14 Score=74.46 Aligned_cols=78 Identities=21% Similarity=0.292 Sum_probs=66.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC--CCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD--DGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
||.+++|+.||..+++|+.|+.+++||+.++.. ..+..|..+|..+. -+. ...+++|+.|.+|+.||.++..++.+
T Consensus 74 PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~-~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t 152 (347)
T KOG0647|consen 74 PVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQV-SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVAT 152 (347)
T ss_pred CeEEEEEccCCceEEeeccCCceEEEEccCCCe-eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeee
Confidence 688999999999999999999999999998854 45567889998887 443 45789999999999999998877766
Q ss_pred ec
Q psy13945 78 IQ 79 (86)
Q Consensus 78 ~~ 79 (86)
+.
T Consensus 153 ~~ 154 (347)
T KOG0647|consen 153 LQ 154 (347)
T ss_pred ee
Confidence 64
No 48
>KOG0973|consensus
Probab=99.59 E-value=3.5e-14 Score=83.94 Aligned_cols=85 Identities=25% Similarity=0.520 Sum_probs=76.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccC-------C-----------ceEEEEeCCccceEEEE-eCCCCeEEEEeCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRT-------G-----------TSLASWKGHEGEILQLV-TADDGTLISSSLD 61 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~-----------~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~ 61 (86)
.|.|+.|++||+++++|++|+.+.+|.... + ++...+++|...|..+. +|++.++++++.|
T Consensus 71 sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~D 150 (942)
T KOG0973|consen 71 SVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLD 150 (942)
T ss_pred ceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEeccc
Confidence 478999999999999999999999998662 1 23567789999999999 9999999999999
Q ss_pred CCEEEEeCCCCeEEEeecCCCCCC
Q psy13945 62 QTISAWHTNDGSLKCNIQGPTEPV 85 (86)
Q Consensus 62 ~~i~~~~~~~~~~~~~~~~~~~~v 85 (86)
++|.+|+.++.+.+..+++|.+.|
T Consensus 151 nsViiwn~~tF~~~~vl~~H~s~V 174 (942)
T KOG0973|consen 151 NSVIIWNAKTFELLKVLRGHQSLV 174 (942)
T ss_pred ceEEEEccccceeeeeeecccccc
Confidence 999999999999999999998765
No 49
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.59 E-value=1.5e-13 Score=71.70 Aligned_cols=84 Identities=33% Similarity=0.557 Sum_probs=73.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|+++.+++++.++.+.+|+..+++....+..+...+..+. .+++..+++++.++.+.+|++..++....+.
T Consensus 11 ~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~ 90 (289)
T cd00200 11 GVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLT 90 (289)
T ss_pred CEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEe
Confidence 588999999999999999999999999988887777888888888888 8888899999999999999999877777776
Q ss_pred CCCCC
Q psy13945 80 GPTEP 84 (86)
Q Consensus 80 ~~~~~ 84 (86)
.|...
T Consensus 91 ~~~~~ 95 (289)
T cd00200 91 GHTSY 95 (289)
T ss_pred ccCCc
Confidence 66543
No 50
>KOG0315|consensus
Probab=99.59 E-value=2.4e-14 Score=74.26 Aligned_cols=76 Identities=20% Similarity=0.483 Sum_probs=65.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
|+.+.|..||+..++|++||++++||++.......++ +..+|.++. +|+...++++..++.|++||+....+...+
T Consensus 86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~l 162 (311)
T KOG0315|consen 86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHEL 162 (311)
T ss_pred eEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccccc
Confidence 6889999999999999999999999998855555544 568999999 999999999999999999999876555444
No 51
>KOG0645|consensus
Probab=99.58 E-value=2.2e-13 Score=71.30 Aligned_cols=85 Identities=22% Similarity=0.371 Sum_probs=75.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCC--ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC---CeE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTG--TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND---GSL 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~ 74 (86)
.|..++|+|.|+++++++.|.++.+|.-..+ ++..++.+|...|.+++ ++++.+|++++.|..+=+|.+.. -.|
T Consensus 63 sVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec 142 (312)
T KOG0645|consen 63 SVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFEC 142 (312)
T ss_pred eeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEE
Confidence 4789999999999999999999999975543 56788999999999999 99999999999999999999863 368
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
...+..|+..|
T Consensus 143 ~aVL~~HtqDV 153 (312)
T KOG0645|consen 143 IAVLQEHTQDV 153 (312)
T ss_pred Eeeeccccccc
Confidence 88899988655
No 52
>KOG0282|consensus
Probab=99.58 E-value=2.1e-15 Score=83.30 Aligned_cols=83 Identities=16% Similarity=0.236 Sum_probs=71.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCC-CeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADD-GTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|..++|+.+|..+.+++-|+.+++||+++|.+..++.- .....++. +|++ ..++.|+.|+.|+.||+++++.++.+
T Consensus 260 ~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeY 338 (503)
T KOG0282|consen 260 PVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEY 338 (503)
T ss_pred hhhhhhccccCCeeeeeecceeeeeeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHH
Confidence 467889999999999999999999999999999888763 45668888 8886 78899999999999999999877776
Q ss_pred cCCCCC
Q psy13945 79 QGPTEP 84 (86)
Q Consensus 79 ~~~~~~ 84 (86)
..|-..
T Consensus 339 d~hLg~ 344 (503)
T KOG0282|consen 339 DRHLGA 344 (503)
T ss_pred Hhhhhh
Confidence 655443
No 53
>KOG0313|consensus
Probab=99.58 E-value=2.2e-14 Score=77.64 Aligned_cols=85 Identities=26% Similarity=0.411 Sum_probs=73.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCC--c-eEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCCCCe-E
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTG--T-SLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTNDGS-L 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~~~~-~ 74 (86)
++.++.++|...++++|+.+..+++||.+++ . +...+.+|+..|.++. +|. ..+|++++.|+++++||.|.-. +
T Consensus 302 sl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~p 381 (423)
T KOG0313|consen 302 SLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAP 381 (423)
T ss_pred ceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCc
Confidence 3578999999999999999999999998754 2 3577889999999999 875 6678899999999999999765 8
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
+..+.+|.+.|
T Consensus 382 lydI~~h~DKv 392 (423)
T KOG0313|consen 382 LYDIAGHNDKV 392 (423)
T ss_pred ceeeccCCceE
Confidence 89999997765
No 54
>KOG0649|consensus
Probab=99.57 E-value=1.3e-13 Score=71.57 Aligned_cols=79 Identities=23% Similarity=0.402 Sum_probs=70.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|+++...|..+.++.++.|+.++-||+++++....+++|+.-+.++. ......+++|+.|+++++||.+++++++.+..
T Consensus 117 INam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~ 196 (325)
T KOG0649|consen 117 INAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEP 196 (325)
T ss_pred cceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEecc
Confidence 56777888777677777899999999999999999999999999999 77788899999999999999999999988764
No 55
>KOG0274|consensus
Probab=99.57 E-value=1.1e-13 Score=79.15 Aligned_cols=84 Identities=27% Similarity=0.414 Sum_probs=69.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
|.++.+...+..+++|+.|.++++||..++++...+.+|...+.++. .....+++|+.|.+|++|++.++.++..+.+|
T Consensus 252 V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~-~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h 330 (537)
T KOG0274|consen 252 VWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLT-IDPFLLVSGSRDNTVKVWDVTNGACLNLLRGH 330 (537)
T ss_pred ceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEE-ccCceEeeccCCceEEEEeccCcceEEEeccc
Confidence 56777776678899999999999999999999999999988887774 34556667888999999999989999988888
Q ss_pred CCCCC
Q psy13945 82 TEPVH 86 (86)
Q Consensus 82 ~~~v~ 86 (86)
.+.|+
T Consensus 331 ~~~V~ 335 (537)
T KOG0274|consen 331 TGPVN 335 (537)
T ss_pred cccEE
Confidence 87764
No 56
>KOG0302|consensus
Probab=99.57 E-value=3.2e-14 Score=77.07 Aligned_cols=84 Identities=20% Similarity=0.336 Sum_probs=68.8
Q ss_pred eeEEEECCCC-CEEEEEeCCCeEEEEEccCCc--eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC---CeE
Q psy13945 2 IRCIAVSSSG-SWIAIGQASGVLTLLDLRTGT--SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND---GSL 74 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~ 74 (86)
|..++|+|.. ..|++++.|+.|++||++.+. .....++|..-|..+. +....++++|+.++++++||+|+ +.+
T Consensus 260 VEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~p 339 (440)
T KOG0302|consen 260 VEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQP 339 (440)
T ss_pred hhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCc
Confidence 5678899854 678999999999999998763 2334478989999888 77767899999999999999985 567
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
+..|+.|..+|
T Consensus 340 VA~fk~Hk~pI 350 (440)
T KOG0302|consen 340 VATFKYHKAPI 350 (440)
T ss_pred ceeEEeccCCe
Confidence 88888888776
No 57
>KOG0645|consensus
Probab=99.57 E-value=2.5e-13 Score=71.07 Aligned_cols=83 Identities=19% Similarity=0.407 Sum_probs=72.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCC---ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC-CC--eE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTG---TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN-DG--SL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~--~~ 74 (86)
|.|++|+++|+++++.++|+.+.+|.+..+ ++...+..|.+-|..+. +|...+|++++.|.+|++|.-. .. .+
T Consensus 108 VK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c 187 (312)
T KOG0645|consen 108 VKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWEC 187 (312)
T ss_pred eeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeE
Confidence 679999999999999999999999998744 34677888999999999 9999999999999999999866 32 68
Q ss_pred EEeecCCCCC
Q psy13945 75 KCNIQGPTEP 84 (86)
Q Consensus 75 ~~~~~~~~~~ 84 (86)
.+++.+|.+.
T Consensus 188 ~~tl~g~~~T 197 (312)
T KOG0645|consen 188 VQTLDGHENT 197 (312)
T ss_pred EEEecCccce
Confidence 8999988754
No 58
>KOG2394|consensus
Probab=99.57 E-value=1.7e-14 Score=81.02 Aligned_cols=85 Identities=22% Similarity=0.342 Sum_probs=77.8
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.|...+|+|||+++++.+.|+.++|+|..+.+++..++..-+...|+. +||+.++++|+.|-.+.+|.+..++.+..-.
T Consensus 292 ~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGq 371 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQ 371 (636)
T ss_pred cccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEecc
Confidence 367889999999999999999999999998888888777778889999 9999999999999999999999999988888
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|.+.|
T Consensus 372 GHkSWV 377 (636)
T KOG2394|consen 372 GHKSWV 377 (636)
T ss_pred ccccce
Confidence 898776
No 59
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.56 E-value=3.1e-13 Score=80.32 Aligned_cols=80 Identities=24% Similarity=0.312 Sum_probs=70.2
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+.+++|++ ++..+++++.|+++++||+.+++.+..+.+|...|.++. +| ++..+++++.|+.+++||++++.++..+
T Consensus 535 v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~ 614 (793)
T PLN00181 535 LSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 614 (793)
T ss_pred eeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 56788876 478899999999999999998888888899999999999 75 7889999999999999999988887776
Q ss_pred cCC
Q psy13945 79 QGP 81 (86)
Q Consensus 79 ~~~ 81 (86)
..+
T Consensus 615 ~~~ 617 (793)
T PLN00181 615 KTK 617 (793)
T ss_pred ecC
Confidence 543
No 60
>KOG0295|consensus
Probab=99.55 E-value=3.5e-14 Score=76.51 Aligned_cols=84 Identities=19% Similarity=0.302 Sum_probs=78.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|.++.|-|.|.++++.+.|.++++|+..++.+..++.+|.+.|..++ ..|+..+++++.|.++++|-..++.|...++.
T Consensus 196 vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~ 275 (406)
T KOG0295|consen 196 VSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELRE 275 (406)
T ss_pred eeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhc
Confidence 67899999999999999999999999999999999999999999999 99999999999999999999999988888888
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|+-.|
T Consensus 276 hEh~v 280 (406)
T KOG0295|consen 276 HEHPV 280 (406)
T ss_pred cccce
Confidence 86543
No 61
>KOG0282|consensus
Probab=99.55 E-value=5.6e-15 Score=81.63 Aligned_cols=78 Identities=19% Similarity=0.399 Sum_probs=71.8
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEccC-CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLRT-GTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
|+++.|.| .+.++++++.|+.|++|++.. +.++.++.+|..+|..+. +.++..+++++.|..+++||.++|+++..|
T Consensus 217 vsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f 296 (503)
T KOG0282|consen 217 VSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRF 296 (503)
T ss_pred cchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEE
Confidence 56778888 889999999999999999875 888999999999999999 899999999999999999999999999887
Q ss_pred c
Q psy13945 79 Q 79 (86)
Q Consensus 79 ~ 79 (86)
.
T Consensus 297 ~ 297 (503)
T KOG0282|consen 297 H 297 (503)
T ss_pred e
Confidence 4
No 62
>KOG0264|consensus
Probab=99.55 E-value=1.8e-13 Score=75.08 Aligned_cols=85 Identities=29% Similarity=0.502 Sum_probs=69.2
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCCc-eEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCCC-C---
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTGT-SLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTND-G--- 72 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~~-~--- 72 (86)
+|.|++|+| ++..|++|+.|++|.+||+++.+ .+..+.+|...|..+. +|+ ...+++++.|+.+.+||+.. +
T Consensus 274 ~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq 353 (422)
T KOG0264|consen 274 EVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQ 353 (422)
T ss_pred ceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecccccccc
Confidence 478999999 55778899999999999998754 5788999999999999 886 66778999999999999853 1
Q ss_pred ----------eEEEeecCCCCCC
Q psy13945 73 ----------SLKCNIQGPTEPV 85 (86)
Q Consensus 73 ----------~~~~~~~~~~~~v 85 (86)
+.++.-.||...|
T Consensus 354 ~~eda~dgppEllF~HgGH~~kV 376 (422)
T KOG0264|consen 354 SPEDAEDGPPELLFIHGGHTAKV 376 (422)
T ss_pred ChhhhccCCcceeEEecCccccc
Confidence 1345556777665
No 63
>KOG1446|consensus
Probab=99.55 E-value=3.9e-13 Score=71.20 Aligned_cols=79 Identities=25% Similarity=0.400 Sum_probs=65.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCce--------------------------------------------EEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS--------------------------------------------LAS 36 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------------------------------------------~~~ 36 (86)
.|+++.|+++|.++++.+.|-.+++||...++. +.-
T Consensus 16 ~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRY 95 (311)
T KOG1446|consen 16 KINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRY 95 (311)
T ss_pred ceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEE
Confidence 378999999999999988888999998765532 222
Q ss_pred EeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 37 WKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 37 ~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+.||...|.++. +|-+..+++++.|.+|++||++..+|...+.
T Consensus 96 F~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~ 139 (311)
T KOG1446|consen 96 FPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLN 139 (311)
T ss_pred cCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEe
Confidence 668888999999 9999999999999999999999777766554
No 64
>KOG0294|consensus
Probab=99.55 E-value=1.6e-13 Score=73.02 Aligned_cols=84 Identities=26% Similarity=0.375 Sum_probs=73.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCC--CeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADD--GTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|++++. +++++++|+.|.+|++||......+..+..|.+.|+++. .+.. .++++++.|+.|.+|+...=.++..
T Consensus 45 sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~s 122 (362)
T KOG0294|consen 45 SITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKS 122 (362)
T ss_pred ceeEEEe--cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeee
Confidence 3566766 589999999999999999999999999999999999998 5443 4899999999999999988889999
Q ss_pred ecCCCCCCC
Q psy13945 78 IQGPTEPVH 86 (86)
Q Consensus 78 ~~~~~~~v~ 86 (86)
+++|...|+
T Consensus 123 lK~H~~~Vt 131 (362)
T KOG0294|consen 123 LKAHKGQVT 131 (362)
T ss_pred ecccccccc
Confidence 999988764
No 65
>KOG0310|consensus
Probab=99.54 E-value=2.6e-14 Score=79.04 Aligned_cols=85 Identities=21% Similarity=0.416 Sum_probs=74.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+.++.|..||+++++|+..|.++++|..+...+..+.+|+.++..+. +| ++..+++|++|..+++||+.+......+.
T Consensus 71 v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~ 150 (487)
T KOG0310|consen 71 VYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELS 150 (487)
T ss_pred eeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEec
Confidence 57889999999999999999999999776666778889999999998 66 56677899999999999999888766889
Q ss_pred CCCCCCC
Q psy13945 80 GPTEPVH 86 (86)
Q Consensus 80 ~~~~~v~ 86 (86)
+|+++|+
T Consensus 151 ~htDYVR 157 (487)
T KOG0310|consen 151 GHTDYVR 157 (487)
T ss_pred CCcceeE
Confidence 9999875
No 66
>KOG0274|consensus
Probab=99.54 E-value=6.7e-14 Score=79.96 Aligned_cols=82 Identities=30% Similarity=0.562 Sum_probs=73.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC-eEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG-SLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~ 78 (86)
+|.++..+ +..+++|+.|++|.+||..+++++..+.+|...|+++. ... ..+++|+.|.+|++||+++. +|+.++
T Consensus 333 ~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl 409 (537)
T KOG0274|consen 333 PVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTL 409 (537)
T ss_pred cEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhh
Confidence 46777775 88999999999999999999999999999999999986 444 88899999999999999999 999999
Q ss_pred cCCCCCC
Q psy13945 79 QGPTEPV 85 (86)
Q Consensus 79 ~~~~~~v 85 (86)
.+|.+.|
T Consensus 410 ~~h~~~v 416 (537)
T KOG0274|consen 410 QGHTSLV 416 (537)
T ss_pred cCCcccc
Confidence 9998755
No 67
>KOG0264|consensus
Probab=99.54 E-value=4.7e-14 Score=77.24 Aligned_cols=84 Identities=20% Similarity=0.289 Sum_probs=70.7
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEcc--CCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCC-CeEE
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLR--TGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTND-GSLK 75 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~-~~~~ 75 (86)
|..++|++ +..+|++.+.|+.+.+||.+ +.+......+|...+.|++ .| ++..+++++.|+++.+||+|+ ..++
T Consensus 230 VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~l 309 (422)
T KOG0264|consen 230 VEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPL 309 (422)
T ss_pred eehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCc
Confidence 56788887 44678899999999999998 4555677788999999999 66 577788999999999999997 4688
Q ss_pred EeecCCCCCC
Q psy13945 76 CNIQGPTEPV 85 (86)
Q Consensus 76 ~~~~~~~~~v 85 (86)
..+.+|.+.|
T Consensus 310 h~~e~H~dev 319 (422)
T KOG0264|consen 310 HTFEGHEDEV 319 (422)
T ss_pred eeccCCCcce
Confidence 8999998765
No 68
>KOG0647|consensus
Probab=99.54 E-value=1.2e-13 Score=73.17 Aligned_cols=84 Identities=20% Similarity=0.471 Sum_probs=67.7
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccC-CceE-EEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRT-GTSL-ASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~-~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
.|.+++|+| ...++++++.|++|++|++.. +... .....+.+++.++. +.++..+++++.|+.+++||+.+++. .
T Consensus 29 sIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~-~ 107 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQV-S 107 (347)
T ss_pred chheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCe-e
Confidence 378899999 567788999999999999875 3333 33445788999999 99999999999999999999998844 4
Q ss_pred eecCCCCCC
Q psy13945 77 NIQGPTEPV 85 (86)
Q Consensus 77 ~~~~~~~~v 85 (86)
.+..|..+|
T Consensus 108 ~v~~Hd~pv 116 (347)
T KOG0647|consen 108 QVAAHDAPV 116 (347)
T ss_pred eeeecccce
Confidence 445676665
No 69
>KOG0306|consensus
Probab=99.54 E-value=1.6e-13 Score=79.62 Aligned_cols=84 Identities=20% Similarity=0.362 Sum_probs=79.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|.|+.+|||+++++.+=.|.++.+|=+++.+.-..+-+|.-+|.|+. +|++..+++|+.|..+++|.+.-|.|-+.+.+
T Consensus 511 vL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fA 590 (888)
T KOG0306|consen 511 VLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFA 590 (888)
T ss_pred EEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhc
Confidence 67999999999999999999999999999998888999999999999 99999999999999999999999999999999
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|.+.|
T Consensus 591 HdDSv 595 (888)
T KOG0306|consen 591 HDDSV 595 (888)
T ss_pred ccCce
Confidence 98875
No 70
>KOG0278|consensus
Probab=99.53 E-value=9.8e-14 Score=72.19 Aligned_cols=74 Identities=24% Similarity=0.379 Sum_probs=67.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
|.+..++|+...+++|+++..++.||..+++.+..+ ++|.++|.|+. +|++..+++|+.|++|++|+...++..
T Consensus 227 V~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 227 VESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred cccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 567788999999999999999999999999999886 88999999999 999999999999999999998766543
No 71
>KOG0308|consensus
Probab=99.53 E-value=8.8e-14 Score=79.47 Aligned_cols=86 Identities=21% Similarity=0.426 Sum_probs=74.4
Q ss_pred CeeEEEE-CCCCCEEEEEeCCCeEEEEEccCCce----------EEEEe-CCccceEEEE-eCCCCeEEEEeCCCCEEEE
Q psy13945 1 LIRCIAV-SSSGSWIAIGQASGVLTLLDLRTGTS----------LASWK-GHEGEILQLV-TADDGTLISSSLDQTISAW 67 (86)
Q Consensus 1 ~i~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~----------~~~~~-~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~ 67 (86)
+|.|+++ .++..++++|+.|+.|.+||+.++.. ...+. ++...|++++ .+.+..+++|+..+-+++|
T Consensus 119 YVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~w 198 (735)
T KOG0308|consen 119 YVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLW 198 (735)
T ss_pred hheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEe
Confidence 4789999 88899999999999999999987632 11222 6778999999 8999999999999999999
Q ss_pred eCCCCeEEEeecCCCCCCC
Q psy13945 68 HTNDGSLKCNIQGPTEPVH 86 (86)
Q Consensus 68 ~~~~~~~~~~~~~~~~~v~ 86 (86)
|.++++.+..++||++.|+
T Consensus 199 Dprt~~kimkLrGHTdNVr 217 (735)
T KOG0308|consen 199 DPRTCKKIMKLRGHTDNVR 217 (735)
T ss_pred ccccccceeeeeccccceE
Confidence 9999999999999998874
No 72
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.52 E-value=2e-12 Score=67.56 Aligned_cols=85 Identities=25% Similarity=0.417 Sum_probs=73.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.+.++.|+++++++++++.++.+.+||..+++....+..+...+.++. ++++..++++..++.+.+||++.++....+.
T Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~ 174 (289)
T cd00200 95 YVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLT 174 (289)
T ss_pred cEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEe
Confidence 367899999988888888899999999988888888888888899999 8888888888889999999999888887777
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
.|...+
T Consensus 175 ~~~~~i 180 (289)
T cd00200 175 GHTGEV 180 (289)
T ss_pred cCcccc
Confidence 766443
No 73
>KOG0306|consensus
Probab=99.52 E-value=5.9e-14 Score=81.29 Aligned_cols=85 Identities=14% Similarity=0.265 Sum_probs=79.7
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
||.|+..+||+.++++++.|..+++|-++-|.+-..+.+|...|.++. -|....+.+++.|+.++.||...-.+++.+.
T Consensus 552 PV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~ 631 (888)
T KOG0306|consen 552 PVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLD 631 (888)
T ss_pred ceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeec
Confidence 789999999999999999999999999999999999999999999999 8999999999999999999998889999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 632 ~H~~ev 637 (888)
T KOG0306|consen 632 GHHSEV 637 (888)
T ss_pred cchhee
Confidence 987654
No 74
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.51 E-value=1.3e-12 Score=77.78 Aligned_cols=84 Identities=20% Similarity=0.316 Sum_probs=69.5
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCCCCe-EEE
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTNDGS-LKC 76 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~-~~~ 76 (86)
+|.+++|+| ++.++++++.|+.+++||+.++.....+..+ ..+.++. . +++..+++++.|+.|++||++... .+.
T Consensus 577 ~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~ 655 (793)
T PLN00181 577 RVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLC 655 (793)
T ss_pred CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccce
Confidence 478999996 7889999999999999999988887777654 5677777 4 568899999999999999998765 566
Q ss_pred eecCCCCCC
Q psy13945 77 NIQGPTEPV 85 (86)
Q Consensus 77 ~~~~~~~~v 85 (86)
.+.+|...|
T Consensus 656 ~~~~h~~~V 664 (793)
T PLN00181 656 TMIGHSKTV 664 (793)
T ss_pred EecCCCCCE
Confidence 777887654
No 75
>KOG0310|consensus
Probab=99.51 E-value=8.4e-13 Score=73.24 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=66.0
Q ss_pred CeeEEEECCC-CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCCCC-eEEE
Q psy13945 1 LIRCIAVSSS-GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTNDG-SLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~~~-~~~~ 76 (86)
|+..+.|+|+ +..+++|++|+.+++||+.+..++..+.+|+.-|.+.+ +|. ..++++|+.|++|++||++.. ..+.
T Consensus 112 pv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~ 191 (487)
T KOG0310|consen 112 PVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVV 191 (487)
T ss_pred ceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeE
Confidence 5778889985 46788999999999999999888778899999999999 765 557889999999999999876 5555
Q ss_pred ee
Q psy13945 77 NI 78 (86)
Q Consensus 77 ~~ 78 (86)
++
T Consensus 192 el 193 (487)
T KOG0310|consen 192 EL 193 (487)
T ss_pred Ee
Confidence 55
No 76
>KOG0277|consensus
Probab=99.50 E-value=5.4e-13 Score=69.47 Aligned_cols=84 Identities=23% Similarity=0.327 Sum_probs=68.2
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCCC-CeEEEe
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTND-GSLKCN 77 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~~-~~~~~~ 77 (86)
|....|+| ..+++++++.|+++++||++..-....+.+|..++.+.. + .+...+++++.|+.|+.||++. ..++.+
T Consensus 150 Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~e 229 (311)
T KOG0277|consen 150 IYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFE 229 (311)
T ss_pred EEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcccccee
Confidence 56788998 557899999999999999875433334888988999988 5 5788899999999999999987 457788
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
+.+|.-.|
T Consensus 230 L~gh~~AV 237 (311)
T KOG0277|consen 230 LNGHGLAV 237 (311)
T ss_pred ecCCceEE
Confidence 88886444
No 77
>KOG0296|consensus
Probab=99.49 E-value=2.3e-12 Score=69.68 Aligned_cols=79 Identities=14% Similarity=0.294 Sum_probs=73.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
++.+++.+|+.+++++|+.|-.-.+|++.++..+..+.+|+..|.++. +.++.++++|+.++.+++|+..++.....+.
T Consensus 66 svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~ 145 (399)
T KOG0296|consen 66 SVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLD 145 (399)
T ss_pred ceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEee
Confidence 478899999999999999999999999999999999999999999999 8999999999999999999999887666653
No 78
>KOG0283|consensus
Probab=99.49 E-value=3.7e-13 Score=78.02 Aligned_cols=72 Identities=19% Similarity=0.295 Sum_probs=62.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
|..+.|+. +.+|++++.|.++++|++...+++..|. |...|+|++ +| |.++|++|+.|+.+++|++...+..
T Consensus 372 ILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv 445 (712)
T KOG0283|consen 372 ILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVV 445 (712)
T ss_pred heeccccc-CCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeE
Confidence 56788887 5678899999999999999888888766 899999999 76 7899999999999999999776544
No 79
>KOG0772|consensus
Probab=99.48 E-value=1.3e-13 Score=77.28 Aligned_cols=80 Identities=21% Similarity=0.301 Sum_probs=65.7
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCce---EEEEeCCcc--ceEEEE-eCCCCeEEEEeCCCCEEEEeCCC-Ce
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS---LASWKGHEG--EILQLV-TADDGTLISSSLDQTISAWHTND-GS 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~--~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~-~~ 73 (86)
+++.++|++|+.+|++|..||.|.+|+.....+ ...-.+|.. .|+|+. +++++.|++.+.|.++++||+++ .+
T Consensus 319 ~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk 398 (641)
T KOG0772|consen 319 PVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK 398 (641)
T ss_pred CceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccccc
Confidence 467899999999999999999999999754332 233356765 899999 99999999999999999999987 45
Q ss_pred EEEeecC
Q psy13945 74 LKCNIQG 80 (86)
Q Consensus 74 ~~~~~~~ 80 (86)
++.+..+
T Consensus 399 pL~~~tg 405 (641)
T KOG0772|consen 399 PLNVRTG 405 (641)
T ss_pred chhhhcC
Confidence 6665554
No 80
>KOG0640|consensus
Probab=99.48 E-value=1.9e-13 Score=73.02 Aligned_cols=79 Identities=23% Similarity=0.362 Sum_probs=69.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE---EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA---SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
+|.++.|+|.|.+++.|.+..++++||+.+.++.. .-..|++.|.++. ++.+.++++++.|+.|++||--.++|+.
T Consensus 218 ~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~ 297 (430)
T KOG0640|consen 218 PVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVR 297 (430)
T ss_pred eeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHH
Confidence 57899999999999999999999999998876633 2345788999999 9999999999999999999998888887
Q ss_pred eec
Q psy13945 77 NIQ 79 (86)
Q Consensus 77 ~~~ 79 (86)
++.
T Consensus 298 t~~ 300 (430)
T KOG0640|consen 298 TIG 300 (430)
T ss_pred HHH
Confidence 774
No 81
>KOG0283|consensus
Probab=99.48 E-value=2.4e-13 Score=78.78 Aligned_cols=84 Identities=25% Similarity=0.436 Sum_probs=65.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccC--------------------------------C-----------------
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRT--------------------------------G----------------- 31 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------------------------------~----------------- 31 (86)
+|.++.|++||+++++|+.|+.|+||.+.. .
T Consensus 269 aIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~ 348 (712)
T KOG0283|consen 269 AIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCV 348 (712)
T ss_pred cEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCccc
Confidence 488999999999999999999999997654 0
Q ss_pred -----------ceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCCCCC
Q psy13945 32 -----------TSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQGPTEPV 85 (86)
Q Consensus 32 -----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 85 (86)
++...+.+|...|..+.......|++++.|.++++|++....|+..|. |.+.|
T Consensus 349 ~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfV 412 (712)
T KOG0283|consen 349 LLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFV 412 (712)
T ss_pred cCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCee
Confidence 011124455555655553356778899999999999999999999995 77765
No 82
>KOG0296|consensus
Probab=99.47 E-value=2.6e-12 Score=69.51 Aligned_cols=78 Identities=15% Similarity=0.225 Sum_probs=72.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|..+.|+|-++.+++|+.||.+.+|.+......+.+.+|+.++.+-. .|++..++++..|++|++|+..++.+++.+.
T Consensus 151 ieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 151 IEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred eEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEec
Confidence 45688999999999999999999999998888889999999999988 8999999999999999999999999888876
No 83
>KOG1407|consensus
Probab=99.47 E-value=6e-13 Score=69.47 Aligned_cols=77 Identities=22% Similarity=0.277 Sum_probs=71.0
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
-|+.|+|+|+++++|+.|-.+.+||++..-+...+..+..+|..+. +.+++++++++.|..|-+=+.++|..+..+.
T Consensus 193 icI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~ 270 (313)
T KOG1407|consen 193 ICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP 270 (313)
T ss_pred EEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee
Confidence 4889999999999999999999999998888888999999999999 8999999999999999999999988777664
No 84
>KOG0646|consensus
Probab=99.46 E-value=5.4e-13 Score=73.73 Aligned_cols=85 Identities=24% Similarity=0.306 Sum_probs=75.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC---------
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN--------- 70 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~--------- 70 (86)
+|.+++-+|+|.+++.|...+.+++|.+.+|..+..+.+|.+.|+++. +.++.++++++.|+.|.+|.+.
T Consensus 83 ~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~ 162 (476)
T KOG0646|consen 83 PVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDH 162 (476)
T ss_pred ceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCC
Confidence 478999999999999998999999999999999999999999999999 8999999999999999999763
Q ss_pred CCeEEEeecCCCCCC
Q psy13945 71 DGSLKCNIQGPTEPV 85 (86)
Q Consensus 71 ~~~~~~~~~~~~~~v 85 (86)
+-+++..|.+|.-.|
T Consensus 163 ~~~p~~~f~~HtlsI 177 (476)
T KOG0646|consen 163 SVKPLHIFSDHTLSI 177 (476)
T ss_pred CccceeeeccCccee
Confidence 235777788886554
No 85
>KOG0293|consensus
Probab=99.46 E-value=1.1e-12 Score=72.17 Aligned_cols=86 Identities=21% Similarity=0.359 Sum_probs=74.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-e---CCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-T---ADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~---~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
+|++.+.+.|+++++..-.+..+.+||++....+.++.+|+..-+-+. . .+...+++|+.|++|++|+..+++.+.
T Consensus 397 ~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~ 476 (519)
T KOG0293|consen 397 PITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLA 476 (519)
T ss_pred ceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeE
Confidence 578999999999999999999999999998888888889887655554 2 345688999999999999999999999
Q ss_pred eecCCCCCCC
Q psy13945 77 NIQGPTEPVH 86 (86)
Q Consensus 77 ~~~~~~~~v~ 86 (86)
++.||...|+
T Consensus 477 ~LsGHs~~vN 486 (519)
T KOG0293|consen 477 VLSGHSKTVN 486 (519)
T ss_pred eecCCcceee
Confidence 9999987664
No 86
>KOG0318|consensus
Probab=99.46 E-value=2.4e-12 Score=72.36 Aligned_cols=85 Identities=20% Similarity=0.275 Sum_probs=70.7
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceE-EEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC-eEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSL-ASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG-SLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~ 77 (86)
+|++++|+||+.+|++++..+.+.+||..++++. ..+.-|..+|.+++ +|+..++++|+.|..|.+|++..- +.+..
T Consensus 489 ~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~i 568 (603)
T KOG0318|consen 489 AITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIII 568 (603)
T ss_pred CceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEe
Confidence 5789999999999999999999999999888773 44555899999999 999999999999999999998753 33333
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
..+|...|
T Consensus 569 knAH~~gV 576 (603)
T KOG0318|consen 569 KNAHLGGV 576 (603)
T ss_pred ccccccCc
Confidence 44565544
No 87
>KOG0313|consensus
Probab=99.45 E-value=2.3e-12 Score=70.00 Aligned_cols=83 Identities=18% Similarity=0.202 Sum_probs=71.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC---eEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG---SLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~---~~~~ 76 (86)
+|.++.|++ ...+++++.|++|+.||+.++....++.+ +....++. .+...++++|+.|..+++||.+++ ...+
T Consensus 262 ~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~ 339 (423)
T KOG0313|consen 262 PVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQ 339 (423)
T ss_pred ceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEE
Confidence 578899988 67789999999999999999888777665 46678999 999999999999999999999864 4667
Q ss_pred eecCCCCCC
Q psy13945 77 NIQGPTEPV 85 (86)
Q Consensus 77 ~~~~~~~~v 85 (86)
.|.+|++.|
T Consensus 340 s~~gH~nwV 348 (423)
T KOG0313|consen 340 SLIGHKNWV 348 (423)
T ss_pred eeecchhhh
Confidence 889998765
No 88
>KOG0267|consensus
Probab=99.45 E-value=4.2e-14 Score=81.50 Aligned_cols=85 Identities=21% Similarity=0.295 Sum_probs=78.7
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.++.|+++..++++|..+|+|++||+...+...++.+|...+.+++ +|.+.++++++.|..+.+||++..-|.+.+.
T Consensus 72 pIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~ 151 (825)
T KOG0267|consen 72 PIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYK 151 (825)
T ss_pred cceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeec
Confidence 578999999999999999999999999999999999999999999999 9999999999999999999999888999888
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 152 s~~~vv 157 (825)
T KOG0267|consen 152 SHTRVV 157 (825)
T ss_pred CCccee
Confidence 887654
No 89
>KOG1034|consensus
Probab=99.45 E-value=1.3e-12 Score=70.03 Aligned_cols=70 Identities=20% Similarity=0.404 Sum_probs=62.2
Q ss_pred CeeEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEE---eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASW---KGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
.|+.+.++|+. +++++++.|..+++|++++..++..+ .+|...|.++. ++++..+++++.|+++++|++.
T Consensus 137 sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 137 SINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred cchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence 36678889976 68999999999999999999886555 56889999999 9999999999999999999987
No 90
>KOG0639|consensus
Probab=99.45 E-value=1.1e-13 Score=77.69 Aligned_cols=74 Identities=20% Similarity=0.328 Sum_probs=68.2
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
..++.+||.+..++...||.|.|||+.+...+..+.+|...+.|+. ++++..+.+|+.|++++.||+++++.++
T Consensus 513 yALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlq 587 (705)
T KOG0639|consen 513 YALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQ 587 (705)
T ss_pred hhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhh
Confidence 3578899999999999999999999999999999999999999999 9999999999999999999999876543
No 91
>KOG1009|consensus
Probab=99.45 E-value=2.3e-12 Score=70.41 Aligned_cols=86 Identities=23% Similarity=0.402 Sum_probs=74.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEcc--------C--------CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLR--------T--------GTSLASWKGHEGEILQLV-TADDGTLISSSLDQT 63 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~--------~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~ 63 (86)
+|+++.|+|+|.++++|++++.+.+|-.. + ..+...+.+|...++.++ ++++..+++++.|..
T Consensus 67 aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns 146 (434)
T KOG1009|consen 67 AVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNS 146 (434)
T ss_pred eeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccce
Confidence 47899999999999999999999999754 2 112345667888999999 999999999999999
Q ss_pred EEEEeCCCCeEEEeecCCCCCCC
Q psy13945 64 ISAWHTNDGSLKCNIQGPTEPVH 86 (86)
Q Consensus 64 i~~~~~~~~~~~~~~~~~~~~v~ 86 (86)
+++||...|.....+.+|...|+
T Consensus 147 ~~l~Dv~~G~l~~~~~dh~~yvq 169 (434)
T KOG1009|consen 147 VRLWDVHAGQLLAILDDHEHYVQ 169 (434)
T ss_pred EEEEEeccceeEeeccccccccc
Confidence 99999999999999999987664
No 92
>KOG0300|consensus
Probab=99.45 E-value=3.7e-13 Score=72.24 Aligned_cols=84 Identities=20% Similarity=0.319 Sum_probs=75.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC-eEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG-SLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~ 79 (86)
|.+..|-..|..+++++.|.+..+||+++++++..+.+|........ +|...++++.+.|.+.++||++.. ..+..|.
T Consensus 275 V~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQ 354 (481)
T KOG0300|consen 275 VSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQ 354 (481)
T ss_pred eEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeec
Confidence 45667777889999999999999999999999999999999999888 999999999999999999999853 5667899
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|++.|
T Consensus 355 GHtdtV 360 (481)
T KOG0300|consen 355 GHTDTV 360 (481)
T ss_pred ccccce
Confidence 998776
No 93
>KOG0269|consensus
Probab=99.43 E-value=4.7e-13 Score=77.71 Aligned_cols=71 Identities=28% Similarity=0.397 Sum_probs=62.6
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEccC-CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLRT-GTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
|..+.|+| .+..|+++.+.|.+.+||++. ......+.+|.++|.++. +|+..++++|+.|+.+++|+..+.
T Consensus 179 iRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~ 252 (839)
T KOG0269|consen 179 IRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDS 252 (839)
T ss_pred hhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCC
Confidence 67899998 567899999999999999874 445677889999999999 999999999999999999998754
No 94
>KOG0294|consensus
Probab=99.42 E-value=3.9e-12 Score=67.89 Aligned_cols=75 Identities=20% Similarity=0.309 Sum_probs=67.5
Q ss_pred CeeEEEECCCCC--EEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 1 LIRCIAVSSSGS--WIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 1 ~i~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
.|+++.|.++.. .+++++.||.+.+|+...-+....+++|.+.|+.++ +|.+.+-++.+.|+.+++|++-.|+.-
T Consensus 85 sitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a 162 (362)
T KOG0294|consen 85 SITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVA 162 (362)
T ss_pred ceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccc
Confidence 378899988764 789999999999999998888999999999999999 999999999999999999999776533
No 95
>KOG0267|consensus
Probab=99.41 E-value=8.2e-13 Score=76.40 Aligned_cols=84 Identities=21% Similarity=0.343 Sum_probs=76.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+..+.|+|-+.+.+.|+.|+-+.+||.+...+...+.+|...+..+. .|++.+++.++.|..+++||...|+....|..
T Consensus 115 ~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~ 194 (825)
T KOG0267|consen 115 ITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKS 194 (825)
T ss_pred cceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccccccccccc
Confidence 56788999999999999999999999998888888888888888888 99999999999999999999999999999988
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|...+
T Consensus 195 ~e~~v 199 (825)
T KOG0267|consen 195 HEGKV 199 (825)
T ss_pred ccccc
Confidence 87665
No 96
>KOG0302|consensus
Probab=99.41 E-value=4.3e-12 Score=69.09 Aligned_cols=69 Identities=26% Similarity=0.498 Sum_probs=60.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEcc---CCceEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLR---TGTSLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~ 70 (86)
|+.+.|+..-.+|++|+++|++++||++ .++++..++.|+.+|+++. +|. ...++.++.|.+|.+||+.
T Consensus 305 VNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 305 VNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred eeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 6788999888899999999999999987 4567789999999999999 875 6677889999999999985
No 97
>KOG0277|consensus
Probab=99.41 E-value=8.5e-12 Score=65.13 Aligned_cols=82 Identities=17% Similarity=0.258 Sum_probs=66.8
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
|.++.|++ .++.+++++-|++|++|+......+.++.+|...|+... +|. ...+++++.|+++++||++..-....+
T Consensus 107 V~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i 186 (311)
T KOG0277|consen 107 VYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSI 186 (311)
T ss_pred eEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEE
Confidence 56778887 445688889999999999888888999999999999999 875 778899999999999999864333336
Q ss_pred cCCCC
Q psy13945 79 QGPTE 83 (86)
Q Consensus 79 ~~~~~ 83 (86)
..|..
T Consensus 187 ~ah~~ 191 (311)
T KOG0277|consen 187 EAHNS 191 (311)
T ss_pred Eeccc
Confidence 66653
No 98
>KOG3914|consensus
Probab=99.41 E-value=1.9e-12 Score=70.46 Aligned_cols=78 Identities=21% Similarity=0.298 Sum_probs=64.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+..++++||++.|+++++|..|++-....--.+..+ .||+..|..+.-.++..+++++.|+++++||+++|+++..+.
T Consensus 154 l~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 154 LLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred hheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEecccCCcccccc
Confidence 468999999999999999999999887654445444 679999988874455668999999999999999999886653
No 99
>KOG0303|consensus
Probab=99.40 E-value=4.6e-12 Score=69.35 Aligned_cols=81 Identities=10% Similarity=0.215 Sum_probs=71.9
Q ss_pred eeEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|.-+.|+|.. +.+++++.|.++.+|+..+++.+.++. |...|+++. +.++..+++.+.|..|++||.+.++.+..-.
T Consensus 134 Vg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~ 212 (472)
T KOG0303|consen 134 VGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGV 212 (472)
T ss_pred EEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecc
Confidence 4568899865 567788889999999999999988877 999999999 8999999999999999999999999998887
Q ss_pred CCCC
Q psy13945 80 GPTE 83 (86)
Q Consensus 80 ~~~~ 83 (86)
+|.+
T Consensus 213 ~heG 216 (472)
T KOG0303|consen 213 AHEG 216 (472)
T ss_pred cccC
Confidence 7754
No 100
>KOG0289|consensus
Probab=99.40 E-value=1.2e-11 Score=68.33 Aligned_cols=86 Identities=15% Similarity=0.306 Sum_probs=75.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC--ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH--EGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|+.+..+|.|.++++++++++.-+.|.+++..+...... .-.+.+.. +||+..|.+|..|+.+++||+........
T Consensus 305 ~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~ 384 (506)
T KOG0289|consen 305 PVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAK 384 (506)
T ss_pred cceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcccccc
Confidence 4788899999999999999999999999998887665542 23577888 99999999999999999999999888899
Q ss_pred ecCCCCCCC
Q psy13945 78 IQGPTEPVH 86 (86)
Q Consensus 78 ~~~~~~~v~ 86 (86)
|-+|+++|.
T Consensus 385 Fpght~~vk 393 (506)
T KOG0289|consen 385 FPGHTGPVK 393 (506)
T ss_pred CCCCCCcee
Confidence 999988763
No 101
>KOG0644|consensus
Probab=99.39 E-value=1.6e-13 Score=80.58 Aligned_cols=85 Identities=26% Similarity=0.536 Sum_probs=80.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.|+.|...|+++++|++|..++||...+..+...+.+|.+.+..++ +.+..++++++.|..|++|.+.++.++.++.
T Consensus 192 aVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLr 271 (1113)
T KOG0644|consen 192 AVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLR 271 (1113)
T ss_pred heeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHh
Confidence 478999999999999999999999999999999999999999999999 8888899999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|++.|
T Consensus 272 ghtgav 277 (1113)
T KOG0644|consen 272 GHTGAV 277 (1113)
T ss_pred ccccce
Confidence 999776
No 102
>KOG1446|consensus
Probab=99.38 E-value=7e-11 Score=62.87 Aligned_cols=79 Identities=24% Similarity=0.360 Sum_probs=67.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCcc--ceE-EEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEG--EIL-QLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~v~-~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
.+.+.|+|||..++.+...+.+++.|.-.|.....+..+.. .+. ... .|++..+++++.|++|.+|+++++..+..
T Consensus 190 w~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~ 269 (311)
T KOG1446|consen 190 WTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAV 269 (311)
T ss_pred eeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeE
Confidence 36789999999999999999999999999998888876543 222 223 59999999999999999999999999988
Q ss_pred ecC
Q psy13945 78 IQG 80 (86)
Q Consensus 78 ~~~ 80 (86)
+++
T Consensus 270 ~~~ 272 (311)
T KOG1446|consen 270 LRG 272 (311)
T ss_pred ecC
Confidence 877
No 103
>KOG0299|consensus
Probab=99.38 E-value=4.8e-12 Score=70.02 Aligned_cols=85 Identities=22% Similarity=0.315 Sum_probs=73.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceE----EE-------------E-eCCccceEEEE-eCCCCeEEEEeCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSL----AS-------------W-KGHEGEILQLV-TADDGTLISSSLD 61 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~-------------~-~~~~~~v~~~~-~~~~~~~~~~~~~ 61 (86)
++.++++++|+.+.++++.+++|.=|++.+++.. .+ - ++|...+.+++ ++++.++++++.|
T Consensus 144 s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d 223 (479)
T KOG0299|consen 144 SVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRD 223 (479)
T ss_pred cceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCC
Confidence 4789999999999999999999999998766521 11 1 25677888999 9999999999999
Q ss_pred CCEEEEeCCCCeEEEeecCCCCCC
Q psy13945 62 QTISAWHTNDGSLKCNIQGPTEPV 85 (86)
Q Consensus 62 ~~i~~~~~~~~~~~~~~~~~~~~v 85 (86)
..+.+|+.++.++++.+.+|++.|
T Consensus 224 ~~v~Iw~~~t~ehv~~~~ghr~~V 247 (479)
T KOG0299|consen 224 RHVQIWDCDTLEHVKVFKGHRGAV 247 (479)
T ss_pred ceEEEecCcccchhhcccccccce
Confidence 999999999999999999999876
No 104
>KOG0639|consensus
Probab=99.37 E-value=3.6e-12 Score=71.78 Aligned_cols=85 Identities=21% Similarity=0.330 Sum_probs=70.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE--EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA--SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|.++.+.|||+.+++|+.-.++.+||+....... .+.......+.++ +|+....+++..|+.|.+||+++...+..
T Consensus 467 yiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vrq 546 (705)
T KOG0639|consen 467 YIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQ 546 (705)
T ss_pred ceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeec
Confidence 46788999999999999999999999987554422 2222234556778 89999999999999999999999999999
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
|.+|++.+
T Consensus 547 fqGhtDGa 554 (705)
T KOG0639|consen 547 FQGHTDGA 554 (705)
T ss_pred ccCCCCCc
Confidence 99998764
No 105
>KOG1274|consensus
Probab=99.37 E-value=8.6e-12 Score=73.62 Aligned_cols=79 Identities=33% Similarity=0.492 Sum_probs=73.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|+.+++++-+|.+++.|++|..|++.+..+......+++|+.+|.++. +|.+..+++...||.+.+|++.++.+...+.
T Consensus 98 p~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~ 177 (933)
T KOG1274|consen 98 PIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLT 177 (933)
T ss_pred cceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcc
Confidence 578999999999999999999999999999888899999999999999 9999999999999999999999887666554
No 106
>KOG0640|consensus
Probab=99.37 E-value=4.6e-12 Score=67.85 Aligned_cols=81 Identities=25% Similarity=0.385 Sum_probs=69.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe-CCcc-ceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK-GHEG-EILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~-~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
.|+++.+++.+++.++++.||.|++||--...++.++. +|.+ .|.+.. ..++..+++.+.|..+++|.+.+++++..
T Consensus 263 ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~ 342 (430)
T KOG0640|consen 263 AITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKE 342 (430)
T ss_pred ceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEE
Confidence 47899999999999999999999999977777776664 4654 555555 68999999999999999999999999998
Q ss_pred ecCC
Q psy13945 78 IQGP 81 (86)
Q Consensus 78 ~~~~ 81 (86)
+.|.
T Consensus 343 YtGA 346 (430)
T KOG0640|consen 343 YTGA 346 (430)
T ss_pred EecC
Confidence 8653
No 107
>KOG0303|consensus
Probab=99.36 E-value=3.8e-12 Score=69.67 Aligned_cols=84 Identities=17% Similarity=0.265 Sum_probs=70.2
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCC-------ceEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTG-------TSLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~ 70 (86)
+|..++|+| +.+.|++|++|.++.+|++... +....+.+|..+|-.++ +|. .+.+++++.|+++.+|+..
T Consensus 83 ~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~ 162 (472)
T KOG0303|consen 83 PVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVG 162 (472)
T ss_pred cccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEecc
Confidence 466788998 5678999999999999998743 33677889999999999 886 6677899999999999999
Q ss_pred CCeEEEeecCCCCCC
Q psy13945 71 DGSLKCNIQGPTEPV 85 (86)
Q Consensus 71 ~~~~~~~~~~~~~~v 85 (86)
+++.+-++. |.+.|
T Consensus 163 tgeali~l~-hpd~i 176 (472)
T KOG0303|consen 163 TGEALITLD-HPDMV 176 (472)
T ss_pred CCceeeecC-CCCeE
Confidence 999887776 76654
No 108
>KOG0305|consensus
Probab=99.36 E-value=9.6e-12 Score=70.17 Aligned_cols=85 Identities=24% Similarity=0.405 Sum_probs=68.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE------------------------------------------EEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA------------------------------------------SWK 38 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------------------------------------------~~~ 38 (86)
.|+++.|+++|..|+.|..+|.+.+||..+.+.+. .+.
T Consensus 219 ~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~ 298 (484)
T KOG0305|consen 219 LVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQ 298 (484)
T ss_pred ceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhh
Confidence 37889999999999999999999999864321111 144
Q ss_pred CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCCCCC
Q psy13945 39 GHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQGPTEPV 85 (86)
Q Consensus 39 ~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 85 (86)
+|.+.|..+. ++++..+++|+.|+.+.+||.....+...+..|...|
T Consensus 299 ~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAV 346 (484)
T KOG0305|consen 299 GHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAV 346 (484)
T ss_pred cccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceee
Confidence 5677788888 8999999999999999999998888888888887765
No 109
>KOG1034|consensus
Probab=99.35 E-value=1.1e-11 Score=66.54 Aligned_cols=75 Identities=23% Similarity=0.477 Sum_probs=65.9
Q ss_pred CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCCCCeEEEeec---CCCCCC
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTNDGSLKCNIQ---GPTEPV 85 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~v 85 (86)
..+++.++..|.|++.|...++....+.+|.+.|..+. .|. .+++++++.|..|++|++++..|+..|. +|++.|
T Consensus 105 ~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeV 184 (385)
T KOG1034|consen 105 NPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEV 184 (385)
T ss_pred CeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcE
Confidence 46788888999999999999999999999999999999 876 5677899999999999999999998875 566554
No 110
>KOG0278|consensus
Probab=99.34 E-value=1.6e-12 Score=67.76 Aligned_cols=78 Identities=22% Similarity=0.454 Sum_probs=67.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCC-ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTG-TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|..++|+.|.+++++|+.++.++++|+... .+...+.+|.+.|..+. ......+++...|+++++||.+++..++.+.
T Consensus 103 vk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~ 182 (334)
T KOG0278|consen 103 VKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE 182 (334)
T ss_pred eeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe
Confidence 578999999999999999999999998744 34667888999999888 6677777888999999999999999888775
No 111
>KOG4283|consensus
Probab=99.34 E-value=2.3e-11 Score=64.87 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=69.5
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC---CCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA---DDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~---~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
|..+.|-| |.-.+.+++.|+++++||..+.++...+. ..+.|++-+ +| ...+++.|..+.+|+++|+..|.+.+
T Consensus 104 iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH 182 (397)
T KOG4283|consen 104 ISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSH 182 (397)
T ss_pred eeeeEEeeecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCccee
Confidence 56777877 55678899999999999999888877766 467788777 65 35577888899999999999999999
Q ss_pred eecCCCCCC
Q psy13945 77 NIQGPTEPV 85 (86)
Q Consensus 77 ~~~~~~~~v 85 (86)
.+.+|++.|
T Consensus 183 ~LsGHr~~v 191 (397)
T KOG4283|consen 183 TLSGHRDGV 191 (397)
T ss_pred eeccccCce
Confidence 999999875
No 112
>KOG2111|consensus
Probab=99.33 E-value=8.7e-11 Score=62.86 Aligned_cols=71 Identities=23% Similarity=0.396 Sum_probs=63.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCe-EEEEEccCCceEEEEeC--CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGV-LTLLDLRTGTSLASWKG--HEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~--~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
.|.|++++.+|.++++++..|+ |++||..+++.+..++. ....+++++ +|+..+++..+..+++.++.++.
T Consensus 183 ~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 183 DIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred ceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 4789999999999999999988 68999999999888764 345799999 99999999999999999998875
No 113
>KOG4283|consensus
Probab=99.32 E-value=4e-11 Score=63.98 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=66.5
Q ss_pred EEEECC---CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeE-EEEeCCCCEEEEeCCCC-eEEEe
Q psy13945 4 CIAVSS---SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTL-ISSSLDQTISAWHTNDG-SLKCN 77 (86)
Q Consensus 4 ~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~-~~~~~~~~i~~~~~~~~-~~~~~ 77 (86)
.-+++| .-.++++|.++-.|++.|+..+.....+.+|.+.|.++. +|...++ ++++.|+.+++||++.. -|+..
T Consensus 148 shamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~ 227 (397)
T KOG4283|consen 148 SHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRV 227 (397)
T ss_pred hhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEE
Confidence 344555 246788999999999999999999999999999999999 9887765 69999999999999864 67777
Q ss_pred ecCCC
Q psy13945 78 IQGPT 82 (86)
Q Consensus 78 ~~~~~ 82 (86)
+..|.
T Consensus 228 lD~hn 232 (397)
T KOG4283|consen 228 LDQHN 232 (397)
T ss_pred eeccc
Confidence 77665
No 114
>KOG0293|consensus
Probab=99.30 E-value=2.8e-11 Score=66.79 Aligned_cols=78 Identities=17% Similarity=0.351 Sum_probs=68.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCce---EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS---LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
|.-+.|+++|+++++++.|.+.-+|++..... ..++.+|..+|..+. +|+.+.+++++.+..+.+||..+|.++..
T Consensus 227 VWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~ 306 (519)
T KOG0293|consen 227 VWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHL 306 (519)
T ss_pred EEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhh
Confidence 56689999999999999999999998764433 578889999999999 99999999999999999999999887766
Q ss_pred ec
Q psy13945 78 IQ 79 (86)
Q Consensus 78 ~~ 79 (86)
+.
T Consensus 307 y~ 308 (519)
T KOG0293|consen 307 YP 308 (519)
T ss_pred cc
Confidence 53
No 115
>KOG0643|consensus
Probab=99.30 E-value=5.1e-11 Score=62.70 Aligned_cols=78 Identities=24% Similarity=0.266 Sum_probs=69.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceE-EEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSL-ASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
++...|.|-+..|++|..+|.|..||.++++.. ..-..|...|..+. +++..++++++.|.+-++||.++.++++++.
T Consensus 150 it~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~ 229 (327)
T KOG0643|consen 150 ITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT 229 (327)
T ss_pred eeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEee
Confidence 567889999999999999999999999998664 44466888999999 9999999999999999999999988887765
No 116
>KOG0269|consensus
Probab=99.30 E-value=9.8e-12 Score=72.46 Aligned_cols=85 Identities=14% Similarity=0.237 Sum_probs=72.4
Q ss_pred CeeEEEECCC-CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCC-CeEEE
Q psy13945 1 LIRCIAVSSS-GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTND-GSLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~ 76 (86)
.+++++|++- -.++++|+.|++++.||++..+...++.+..+.|..+. +| .+..|+++...|.+.+||+|. .++..
T Consensus 135 s~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~ 214 (839)
T KOG0269|consen 135 SANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEK 214 (839)
T ss_pred ceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHH
Confidence 3678999874 46789999999999999998888888888888999999 76 477889999999999999986 56777
Q ss_pred eecCCCCCC
Q psy13945 77 NIQGPTEPV 85 (86)
Q Consensus 77 ~~~~~~~~v 85 (86)
.+.+|.+.|
T Consensus 215 k~~AH~GpV 223 (839)
T KOG0269|consen 215 KLTAHNGPV 223 (839)
T ss_pred HhhcccCce
Confidence 788887765
No 117
>KOG0771|consensus
Probab=99.30 E-value=1.1e-11 Score=67.76 Aligned_cols=76 Identities=22% Similarity=0.349 Sum_probs=67.4
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.+++|+.+|..+++++.||++++|+.+....+.....|...|..+. +|++..+++-+.| ..++|+.+++.++....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence 3689999999999999999999999888887777788999999999 9999999999999 99999999986555443
No 118
>KOG0641|consensus
Probab=99.30 E-value=5.9e-11 Score=61.50 Aligned_cols=78 Identities=14% Similarity=0.273 Sum_probs=65.7
Q ss_pred CCCCEEEEEeCCCeEEEEEccCCceEEEEeC--C-----ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 9 SSGSWIAIGQASGVLTLLDLRTGTSLASWKG--H-----EGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 9 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~-----~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
=++..+++|+.|.++++||++......++.. | ...|.++. .|.+++++++-.|....++|++.+++++.+..
T Consensus 192 wn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~p 271 (350)
T KOG0641|consen 192 WNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHP 271 (350)
T ss_pred ecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCC
Confidence 3677899999999999999987766655432 1 24677888 89999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 81 PTEPVH 86 (86)
Q Consensus 81 ~~~~v~ 86 (86)
|+..|+
T Consensus 272 hsadir 277 (350)
T KOG0641|consen 272 HSADIR 277 (350)
T ss_pred Ccccee
Confidence 987764
No 119
>KOG0646|consensus
Probab=99.29 E-value=2.5e-11 Score=67.34 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=66.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCC----------------ceEEEEeCCcc--ceEEEE-eCCCCeEEEEeCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTG----------------TSLASWKGHEG--EILQLV-TADDGTLISSSLD 61 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------------~~~~~~~~~~~--~v~~~~-~~~~~~~~~~~~~ 61 (86)
++.+++..|.++.++.|..+|.+.+.++... .....+.+|.. .|+|++ +-|+..+++|+.|
T Consensus 219 si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~d 298 (476)
T KOG0646|consen 219 SIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDED 298 (476)
T ss_pred cceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCC
Confidence 4679999999999999999999998876422 22455677777 999999 9999999999999
Q ss_pred CCEEEEeCCCCeEEEeec
Q psy13945 62 QTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 62 ~~i~~~~~~~~~~~~~~~ 79 (86)
+.+++||+...++++++.
T Consensus 299 g~VcvWdi~S~Q~iRtl~ 316 (476)
T KOG0646|consen 299 GKVCVWDIYSKQCIRTLQ 316 (476)
T ss_pred CCEEEEecchHHHHHHHh
Confidence 999999998888777665
No 120
>KOG0305|consensus
Probab=99.29 E-value=5.1e-11 Score=67.35 Aligned_cols=78 Identities=21% Similarity=0.300 Sum_probs=67.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC-CCeEEEEe--CCCCEEEEeCCCCeEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD-DGTLISSS--LDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~--~~~~i~~~~~~~~~~~~~ 77 (86)
|..+.|++|++++++|+.|..+.+||.........+..|...|..++ +|- ...|++|+ .|+.|++|+..++..+..
T Consensus 304 VCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~ 383 (484)
T KOG0305|consen 304 VCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDS 383 (484)
T ss_pred eeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecc
Confidence 67899999999999999999999999977778888899999999999 774 66677665 578999999999887776
Q ss_pred ec
Q psy13945 78 IQ 79 (86)
Q Consensus 78 ~~ 79 (86)
+.
T Consensus 384 vd 385 (484)
T KOG0305|consen 384 VD 385 (484)
T ss_pred cc
Confidence 54
No 121
>KOG1445|consensus
Probab=99.28 E-value=3.6e-12 Score=73.58 Aligned_cols=84 Identities=20% Similarity=0.304 Sum_probs=72.5
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEccCC-------ceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLRTG-------TSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~ 71 (86)
|+.+.|.| |.+.++.+.+|+.|++|.+..+ +....+.+|..+|+++. +| ....+++++.|.+|++||+++
T Consensus 630 vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~ 709 (1012)
T KOG1445|consen 630 VTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLAN 709 (1012)
T ss_pred eeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhh
Confidence 67888988 7788999999999999997632 33567889999999999 76 577889999999999999999
Q ss_pred CeEEEeecCCCCCC
Q psy13945 72 GSLKCNIQGPTEPV 85 (86)
Q Consensus 72 ~~~~~~~~~~~~~v 85 (86)
.+....+.+|++.|
T Consensus 710 ~~~~~~l~gHtdqI 723 (1012)
T KOG1445|consen 710 AKLYSRLVGHTDQI 723 (1012)
T ss_pred hhhhheeccCcCce
Confidence 98888899998876
No 122
>KOG0973|consensus
Probab=99.28 E-value=6.1e-11 Score=70.79 Aligned_cols=70 Identities=19% Similarity=0.234 Sum_probs=66.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
|..+.|+|++.++++++.|.+|.+|+..+.+.+..+.+|...|..+. .|-+.++++-+.|+++++|+..+
T Consensus 132 V~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~d 202 (942)
T KOG0973|consen 132 VLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSD 202 (942)
T ss_pred cceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEccc
Confidence 67899999999999999999999999999988999999999999999 99999999999999999999655
No 123
>KOG0288|consensus
Probab=99.28 E-value=2.6e-12 Score=70.45 Aligned_cols=78 Identities=17% Similarity=0.238 Sum_probs=68.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|+.+.|.+++..+++++.|+.+++|+........++.+|+.+|.++. ......+++++.|.+++.||+....|..+.
T Consensus 221 ~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~ 299 (459)
T KOG0288|consen 221 NITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTV 299 (459)
T ss_pred CcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccc
Confidence 478899999999999999999999999999999999999999999998 655555899999999999999877666543
No 124
>KOG0288|consensus
Probab=99.26 E-value=4.5e-11 Score=65.74 Aligned_cols=66 Identities=21% Similarity=0.362 Sum_probs=59.1
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCcc--ceEEEE-eCCCCeEEEEeCCCCEEEEe
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEG--EILQLV-TADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~v~~~~-~~~~~~~~~~~~~~~i~~~~ 68 (86)
+.+.|+|++.++++|+.+|.|++|++.++++...+..... .|.++. .|.|..+++++.+..+.+|.
T Consensus 391 trvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 391 TRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred ceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 5678999999999999999999999999999887776544 599999 99999999999999999983
No 125
>KOG0322|consensus
Probab=99.26 E-value=1.8e-11 Score=64.23 Aligned_cols=68 Identities=21% Similarity=0.283 Sum_probs=63.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
|..+.+.||+..+++++.|+.+++|..++..++..++-|...|.+++ +|+...++.++.|.+|.+|++
T Consensus 254 v~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 254 VSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 45678899999999999999999999999999999999999999999 999999999999999999985
No 126
>KOG1408|consensus
Probab=99.25 E-value=1e-11 Score=72.47 Aligned_cols=84 Identities=29% Similarity=0.386 Sum_probs=73.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-e-CC--CCeEEEEeCCCCEEEEeCCC-CeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-T-AD--DGTLISSSLDQTISAWHTND-GSLKC 76 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~-~~--~~~~~~~~~~~~i~~~~~~~-~~~~~ 76 (86)
+.+++.+|+|+.+++|++.|.+++|++...+....+.+|...|.|+. + |. ..++++++.|..|.++|... ...++
T Consensus 462 ~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~q 541 (1080)
T KOG1408|consen 462 FRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQ 541 (1080)
T ss_pred eEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhh
Confidence 57899999999999999999999999998888888999999999998 4 53 55778999999999999864 56778
Q ss_pred eecCCCCCC
Q psy13945 77 NIQGPTEPV 85 (86)
Q Consensus 77 ~~~~~~~~v 85 (86)
++.+|++.|
T Consensus 542 tld~HSssI 550 (1080)
T KOG1408|consen 542 TLDGHSSSI 550 (1080)
T ss_pred hhcccccce
Confidence 888998766
No 127
>KOG0301|consensus
Probab=99.25 E-value=5e-11 Score=68.93 Aligned_cols=81 Identities=27% Similarity=0.402 Sum_probs=66.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+|.+++.-|++ .+++|+.|.+|++|.- ++.+.++.+|..-|..+.-.+...+++++.|+.|+.|++ +|+++..+.+
T Consensus 142 sVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~g 217 (745)
T KOG0301|consen 142 SVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHG 217 (745)
T ss_pred heeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeec
Confidence 35667777776 7889999999999964 677888999999888887445567789999999999998 7888888888
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|++.|
T Consensus 218 htn~v 222 (745)
T KOG0301|consen 218 HTNFV 222 (745)
T ss_pred cceEE
Confidence 88654
No 128
>KOG1408|consensus
Probab=99.23 E-value=2.3e-10 Score=67.16 Aligned_cols=84 Identities=21% Similarity=0.390 Sum_probs=74.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeC---CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKG---HEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+..++..|...++++++.|..|++|++..++....|++ +.+....+. .|.+.++++.+.|.++.++|+.+++|+..
T Consensus 599 lYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~ 678 (1080)
T KOG1408|consen 599 LYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQ 678 (1080)
T ss_pred EEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhh
Confidence 45778889999999999999999999999999888876 334455666 89999999999999999999999999999
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
+.||.+.|
T Consensus 679 m~GHsE~V 686 (1080)
T KOG1408|consen 679 MTGHSEAV 686 (1080)
T ss_pred hcCcchhe
Confidence 99998876
No 129
>KOG1310|consensus
Probab=99.23 E-value=7.5e-11 Score=67.26 Aligned_cols=70 Identities=20% Similarity=0.348 Sum_probs=61.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEE-eC--CCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLV-TA--DDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~--~~~~~~~~~~~~~i~~~~~~~ 71 (86)
|.|+.|+.||.++++|++|..+.|||....+.+..+ .+|...|+++. -| +...+++|..|..|+++|+..
T Consensus 53 VN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~ 126 (758)
T KOG1310|consen 53 VNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDS 126 (758)
T ss_pred ecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccc
Confidence 679999999999999999999999998877776655 57999999998 55 467888999999999999873
No 130
>KOG1007|consensus
Probab=99.22 E-value=4.1e-11 Score=63.69 Aligned_cols=79 Identities=22% Similarity=0.260 Sum_probs=62.8
Q ss_pred EEEECC--CCCEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEE-eCCCC-eEEEEeCCCCEEEEeCCC-CeEEEe
Q psy13945 4 CIAVSS--SGSWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLV-TADDG-TLISSSLDQTISAWHTND-GSLKCN 77 (86)
Q Consensus 4 ~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~-~~~~~~ 77 (86)
+-+|+| |++.+++.+ ++++..||.++.+....+ .+|.+.|..+. .|+.+ .+++++.|+.+++||.+. ..+++.
T Consensus 175 sg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~e 253 (370)
T KOG1007|consen 175 SGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQE 253 (370)
T ss_pred ccccCCCCccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccc
Confidence 346777 677766654 889999999988776655 46888999999 88855 567999999999999984 678888
Q ss_pred ecCCCC
Q psy13945 78 IQGPTE 83 (86)
Q Consensus 78 ~~~~~~ 83 (86)
+.+|+-
T Consensus 254 l~~HsH 259 (370)
T KOG1007|consen 254 LPGHSH 259 (370)
T ss_pred cCCCce
Confidence 888864
No 131
>KOG1407|consensus
Probab=99.21 E-value=1.7e-10 Score=60.61 Aligned_cols=84 Identities=18% Similarity=0.247 Sum_probs=71.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+.-++|+.++.+++.....|.+.+......+++..+.+|.....|+. .|+++.+++|+.|..+.+||+..-.|.+.+.-
T Consensus 150 ~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isR 229 (313)
T KOG1407|consen 150 VNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISR 229 (313)
T ss_pred eeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeecc
Confidence 35678888888888877789999999888899999999999999999 99999999999999999999987777666655
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
+.-+|
T Consensus 230 ldwpV 234 (313)
T KOG1407|consen 230 LDWPV 234 (313)
T ss_pred ccCce
Confidence 54443
No 132
>KOG0641|consensus
Probab=99.21 E-value=8.9e-10 Score=57.25 Aligned_cols=71 Identities=24% Similarity=0.361 Sum_probs=66.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
+|..++..|.|+++++|..|..-.+||++.+..++.+-.|...|.++. +|....+++++.|..|++-|+..
T Consensus 233 avaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqg 304 (350)
T KOG0641|consen 233 AVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG 304 (350)
T ss_pred eeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeeccc
Confidence 467899999999999999999999999999999999999999999999 99999999999999999999863
No 133
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.21 E-value=1.9e-09 Score=55.15 Aligned_cols=73 Identities=18% Similarity=0.376 Sum_probs=56.5
Q ss_pred eeEEEECCCCCEEEEEeC---CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeC------CCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQA---SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSL------DQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~------~~~i~~~~~~~ 71 (86)
+..+.|+|+|++++.++. .|.+.+||..+.+.+..... ..+..+. +|+++.++++.. |..+++|++.
T Consensus 103 ~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~--~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~- 179 (194)
T PF08662_consen 103 RNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEH--SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ- 179 (194)
T ss_pred ceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeecccc--CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-
Confidence 568999999999998764 46799999998777766543 3367888 999999998764 6788999984
Q ss_pred CeEEEe
Q psy13945 72 GSLKCN 77 (86)
Q Consensus 72 ~~~~~~ 77 (86)
|+.+..
T Consensus 180 G~~l~~ 185 (194)
T PF08662_consen 180 GRLLYK 185 (194)
T ss_pred CeEeEe
Confidence 555543
No 134
>KOG1539|consensus
Probab=99.21 E-value=3.9e-10 Score=66.54 Aligned_cols=67 Identities=21% Similarity=0.355 Sum_probs=58.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC-CCEEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLD-QTISAWH 68 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~-~~i~~~~ 68 (86)
.|+.++|||||+.+++++.|++|++||+.++..+-.+.- ..+..++. +|+++.+++...| .-|.+|-
T Consensus 578 ritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~v-d~~~~sls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 578 RITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLV-DSPCTSLSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred ceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEec-CCcceeeEECCCCCEEEEEEecCceEEEEE
Confidence 378999999999999999999999999999998877663 56678888 9999999999888 5789995
No 135
>KOG1539|consensus
Probab=99.20 E-value=3.8e-11 Score=70.60 Aligned_cols=77 Identities=26% Similarity=0.391 Sum_probs=67.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+.++.++.....++.+.++..|+++|..+.+....+.+|..+++.+. +|+++|+++++.|++|++||+-++.++-.+
T Consensus 537 ~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~ 614 (910)
T KOG1539|consen 537 ITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGL 614 (910)
T ss_pred cceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeE
Confidence 45566666777788888999999999999999999999999999999 999999999999999999999988766443
No 136
>KOG2110|consensus
Probab=99.20 E-value=1.1e-09 Score=59.65 Aligned_cols=71 Identities=20% Similarity=0.342 Sum_probs=61.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCe-EEEEEccCCceEEEEeCCc--cceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGV-LTLLDLRTGTSLASWKGHE--GEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~--~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
++.+++|+++|.+++++++.|+ |+|+.+.++..+..++... -.|+++. +++.+++.+.+...+|.++.+..
T Consensus 175 ~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 175 PLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred ceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence 4679999999999999999987 6899999999988887533 4678888 89999999999999999998764
No 137
>KOG1036|consensus
Probab=99.19 E-value=6.6e-10 Score=59.28 Aligned_cols=74 Identities=26% Similarity=0.298 Sum_probs=61.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
|+.+++|.+ ...+++|+.|+.|+.+|+.+++... +..|...+.++. .+....+++|++|++|++||.++.....
T Consensus 56 plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~-igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~ 130 (323)
T KOG1036|consen 56 PLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQ-IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVG 130 (323)
T ss_pred ceeeeeccC-CceEEEeccCceEEEEEecCCccee-eccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccc
Confidence 577888887 4568899999999999998877643 355889999999 8889999999999999999998643333
No 138
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.19 E-value=3.2e-10 Score=43.59 Aligned_cols=37 Identities=30% Similarity=0.560 Sum_probs=34.5
Q ss_pred ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEe
Q psy13945 32 TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 32 ~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~ 68 (86)
++...+.+|...|.++. +|++..+++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 46778899999999999 99999999999999999997
No 139
>KOG2445|consensus
Probab=99.19 E-value=6.8e-10 Score=59.49 Aligned_cols=68 Identities=22% Similarity=0.462 Sum_probs=59.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccC----CceEEEEeCCccceEEEE--eCC-CCeEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRT----GTSLASWKGHEGEILQLV--TAD-DGTLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~v~~~~--~~~-~~~~~~~~~~~~i~~~~~ 69 (86)
|+++.|.+.|+.+++++.|+++.|||... -.....++.|.+.|..+. +|+ |+.+++++.|+++.+|.-
T Consensus 16 ihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE 90 (361)
T KOG2445|consen 16 IHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE 90 (361)
T ss_pred eeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence 78999999999999999999999999642 234567889999999998 565 899999999999999974
No 140
>KOG2048|consensus
Probab=99.18 E-value=3e-10 Score=65.61 Aligned_cols=85 Identities=20% Similarity=0.295 Sum_probs=67.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE-----eC---CccceEEEEeCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW-----KG---HEGEILQLVTADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~---~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
.|.+++|++++..++.|+.||.|++||...+...... .. ...-|+++.+.....+++|...|++.+||...+
T Consensus 156 RvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~g 235 (691)
T KOG2048|consen 156 RVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFG 235 (691)
T ss_pred eEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCc
Confidence 3679999999999999999999999999887765411 11 223466666556778899999999999999999
Q ss_pred eEEEeecCCCCCC
Q psy13945 73 SLKCNIQGPTEPV 85 (86)
Q Consensus 73 ~~~~~~~~~~~~v 85 (86)
..++.+..|...|
T Consensus 236 TLiqS~~~h~adV 248 (691)
T KOG2048|consen 236 TLIQSHSCHDADV 248 (691)
T ss_pred chhhhhhhhhcce
Confidence 8888877776544
No 141
>KOG1332|consensus
Probab=99.18 E-value=1.3e-10 Score=60.57 Aligned_cols=81 Identities=20% Similarity=0.377 Sum_probs=64.2
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCC---ceEEEEeCCccceEEEE--eC-CCCeEEEEeCCCCEEEEeCCCCeEE--E
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTG---TSLASWKGHEGEILQLV--TA-DDGTLISSSLDQTISAWHTNDGSLK--C 76 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~~--~~-~~~~~~~~~~~~~i~~~~~~~~~~~--~ 76 (86)
+....-|..+++.+.|++|+++..... ..+..+.+|.++|..+. +| -+..+++++.|+++.+|.-.+++.. .
T Consensus 17 a~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~ 96 (299)
T KOG1332|consen 17 AQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAY 96 (299)
T ss_pred hhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhh
Confidence 344556889999999999999998743 45788999999999998 56 4899999999999999998887533 2
Q ss_pred eecCCCCCC
Q psy13945 77 NIQGPTEPV 85 (86)
Q Consensus 77 ~~~~~~~~v 85 (86)
....|...|
T Consensus 97 e~~~h~~SV 105 (299)
T KOG1332|consen 97 EHAAHSASV 105 (299)
T ss_pred hhhhhcccc
Confidence 344565554
No 142
>KOG0301|consensus
Probab=99.17 E-value=1.8e-09 Score=62.74 Aligned_cols=74 Identities=24% Similarity=0.422 Sum_probs=63.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|+++++-+++. |++.++||.|+.|++ +++.+..+.+|+..++++. .++...+++++.|+++++|+.. .+.+.+.
T Consensus 182 VRgL~vl~~~~-flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~ 256 (745)
T KOG0301|consen 182 VRGLAVLDDSH-FLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVIT 256 (745)
T ss_pred eeeeEEecCCC-eEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEe
Confidence 56778777655 677888999999997 7899999999999999999 8999999999999999999874 6666654
No 143
>KOG2394|consensus
Probab=99.16 E-value=4.6e-10 Score=63.79 Aligned_cols=47 Identities=19% Similarity=0.408 Sum_probs=43.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV 48 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~ 48 (86)
..|++|+|||++|++|++|--|.||....++++..-.+|+..|..++
T Consensus 335 LLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~Va 381 (636)
T KOG2394|consen 335 LLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVA 381 (636)
T ss_pred eEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEe
Confidence 46999999999999999999999999999999999899999888776
No 144
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.16 E-value=3.7e-09 Score=54.11 Aligned_cols=76 Identities=18% Similarity=0.292 Sum_probs=58.1
Q ss_pred CeeEEEECCCCCEEE--EEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC---CCEEEEeCCCCeE
Q psy13945 1 LIRCIAVSSSGSWIA--IGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLD---QTISAWHTNDGSL 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~---~~i~~~~~~~~~~ 74 (86)
+|.+++|+|+|..++ .|..+..+.+||.+ .+.+..+. ...+..+. +|++..++.++.+ +.+.+||.++.+.
T Consensus 61 ~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~ 137 (194)
T PF08662_consen 61 PIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK 137 (194)
T ss_pred ceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEE
Confidence 478999999998754 35566799999986 44444443 45667888 9999999988754 5699999998887
Q ss_pred EEeec
Q psy13945 75 KCNIQ 79 (86)
Q Consensus 75 ~~~~~ 79 (86)
+....
T Consensus 138 i~~~~ 142 (194)
T PF08662_consen 138 ISTFE 142 (194)
T ss_pred eeccc
Confidence 77664
No 145
>KOG3881|consensus
Probab=99.15 E-value=2.4e-10 Score=62.55 Aligned_cols=76 Identities=28% Similarity=0.395 Sum_probs=68.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEE-EeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLAS-WKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
+++++..-|+++.+++|...+.+..+|.+.++.... +.+..+.+.++. +|..+.+++++.|..++++|+.+...+.
T Consensus 249 ~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~ 326 (412)
T KOG3881|consen 249 PISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLH 326 (412)
T ss_pred cceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhh
Confidence 478889999999999999999999999999998876 788899999999 9999999999999999999998855443
No 146
>KOG0321|consensus
Probab=99.12 E-value=3.2e-10 Score=65.37 Aligned_cols=71 Identities=14% Similarity=0.210 Sum_probs=62.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEE--EeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLAS--WKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~ 71 (86)
+|..+.|.|...+|++++.|.+++.||+...+.... +.+|...+.++. .+ +...|++|+.|+.+.+||++-
T Consensus 102 AifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~ 176 (720)
T KOG0321|consen 102 AIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRC 176 (720)
T ss_pred eeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEec
Confidence 467889999667899999999999999998888766 889999999998 66 577889999999999999874
No 147
>KOG1538|consensus
Probab=99.12 E-value=9.9e-10 Score=64.27 Aligned_cols=68 Identities=25% Similarity=0.435 Sum_probs=61.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
|..++|-|||..++.+. +..+.+||...|..++++++|+..|++++ +.+|..+++|+.|..+.+|...
T Consensus 15 i~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k 83 (1081)
T KOG1538|consen 15 INDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK 83 (1081)
T ss_pred hheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccc
Confidence 57899999998777665 45899999999999999999999999999 9999999999999999999864
No 148
>KOG1445|consensus
Probab=99.10 E-value=8.7e-10 Score=64.16 Aligned_cols=82 Identities=17% Similarity=0.262 Sum_probs=71.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC-CeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND-GSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~ 79 (86)
+.++.|+|..--|......+.+++||+.+.+.+..+.+|...|.+.. +.++..+++.+.|..|+++|.+. .++++...
T Consensus 131 vE~l~fHpTaDgil~s~a~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~te 210 (1012)
T KOG1445|consen 131 VECLRFHPTADGILASGAHGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTTE 210 (1012)
T ss_pred EEEeecccCcCceEEeccCceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCCCcccccc
Confidence 67899999665555566689999999999999999999999999999 99999999999999999999986 57888888
Q ss_pred CCCC
Q psy13945 80 GPTE 83 (86)
Q Consensus 80 ~~~~ 83 (86)
+|.+
T Consensus 211 ~H~~ 214 (1012)
T KOG1445|consen 211 GHGG 214 (1012)
T ss_pred cccc
Confidence 8864
No 149
>KOG0642|consensus
Probab=99.09 E-value=4.7e-10 Score=63.73 Aligned_cols=68 Identities=26% Similarity=0.498 Sum_probs=58.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccC--------CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRT--------GTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
|+.+.|.+....+++++.++++.+|++.. -+.+.+|++|.++|.|+. ..++..+++|+.|+.|++|++
T Consensus 297 ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~ 373 (577)
T KOG0642|consen 297 IRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNL 373 (577)
T ss_pred hhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeecc
Confidence 34567888888899999999999999832 234788999999999999 999999999999999999954
No 150
>KOG0300|consensus
Probab=99.09 E-value=8.2e-10 Score=59.75 Aligned_cols=69 Identities=20% Similarity=0.399 Sum_probs=57.8
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCc-eEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGT-SLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
+.++-+|..+++++++.|.+.++||....- ....|++|...|.+..+..+..+++++.|.++++||+++
T Consensus 318 tHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrN 387 (481)
T KOG0300|consen 318 THCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRN 387 (481)
T ss_pred cccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecc
Confidence 345567888999999999999999987433 357889999999988765677789999999999999975
No 151
>KOG2919|consensus
Probab=99.08 E-value=1.2e-09 Score=59.03 Aligned_cols=81 Identities=16% Similarity=0.274 Sum_probs=59.7
Q ss_pred eeEEEECCCCCEEEEEeC-CCeEEEEEccCC-ceEEEEeCC----ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC-Ce
Q psy13945 2 IRCIAVSSSGSWIAIGQA-SGVLTLLDLRTG-TSLASWKGH----EGEILQLV-TADDGTLISSSLDQTISAWHTND-GS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~-~~~~~~~~~----~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~-~~ 73 (86)
|+.+.|.++|+.+++|.+ +-.|..||++.. ..+..+..| +++|. .. .|++.++++|+.++.|++||... +.
T Consensus 253 vThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~-FDld~~~~~LasG~tdG~V~vwdlk~~gn 331 (406)
T KOG2919|consen 253 VTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRIL-FDLDPKGEILASGDTDGSVRVWDLKDLGN 331 (406)
T ss_pred eeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEE-EecCCCCceeeccCCCccEEEEecCCCCC
Confidence 788999999999888776 568999998753 333344333 33443 34 78999999999999999999987 66
Q ss_pred EEEeecCCCC
Q psy13945 74 LKCNIQGPTE 83 (86)
Q Consensus 74 ~~~~~~~~~~ 83 (86)
.+..+..|.+
T Consensus 332 ~~sv~~~~sd 341 (406)
T KOG2919|consen 332 EVSVTGNYSD 341 (406)
T ss_pred cccccccccc
Confidence 5555554444
No 152
>KOG2110|consensus
Probab=99.08 E-value=5.8e-09 Score=56.99 Aligned_cols=77 Identities=18% Similarity=0.318 Sum_probs=63.4
Q ss_pred EEEECCCCCEEEE--EeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCC-EEEEeCCCCeEEEeec
Q psy13945 4 CIAVSSSGSWIAI--GQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQT-ISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 4 ~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~ 79 (86)
+++++.++.+++- ....|.|.+||..+.+....+.+|++.+.+++ +++|.++++++..|+ ||++.+.+|..+..|+
T Consensus 134 AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFR 213 (391)
T KOG2110|consen 134 ALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFR 213 (391)
T ss_pred eeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeee
Confidence 3344445556663 23358899999999998899999999999999 999999999999997 5899999999888886
Q ss_pred C
Q psy13945 80 G 80 (86)
Q Consensus 80 ~ 80 (86)
.
T Consensus 214 R 214 (391)
T KOG2110|consen 214 R 214 (391)
T ss_pred C
Confidence 3
No 153
>KOG1063|consensus
Probab=99.06 E-value=2.2e-09 Score=62.48 Aligned_cols=71 Identities=18% Similarity=0.344 Sum_probs=60.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCce----EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS----LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
|+.++|+||++++++.++|.+..+|....... ....+.|+--|+... +|++..+++++.|.++.+|.....
T Consensus 575 VT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 575 VTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred EEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 78999999999999999999999998753322 233567887888888 899999999999999999988765
No 154
>KOG1007|consensus
Probab=99.06 E-value=1.6e-09 Score=57.83 Aligned_cols=69 Identities=13% Similarity=0.233 Sum_probs=57.8
Q ss_pred eeEEEECCCCC-EEEEEeCCCeEEEEEccC-CceEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGS-WIAIGQASGVLTLLDLRT-GTSLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~ 70 (86)
|..+.|+|+.+ .++++++|+.+++||.+. ..++..+.+|...|+++. .|. .+++++++.|..+.+|...
T Consensus 217 vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~ 289 (370)
T KOG1007|consen 217 VRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCAS 289 (370)
T ss_pred eeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecc
Confidence 56788999875 578899999999999874 556778889999999999 765 5667899999999999764
No 155
>KOG1036|consensus
Probab=99.03 E-value=7.7e-09 Score=55.35 Aligned_cols=74 Identities=24% Similarity=0.380 Sum_probs=60.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
|+.+.|+|.+..++.++.||.+++||.........+. ++.++.+..+.+...+++|+.|+.|+.+|+.++...+
T Consensus 16 IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~ 89 (323)
T KOG1036|consen 16 ISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQ 89 (323)
T ss_pred eeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccCCceEEEeccCceEEEEEecCCccee
Confidence 7899999988888889999999999988765444444 6777777775567788999999999999998776444
No 156
>KOG0270|consensus
Probab=99.03 E-value=2.5e-09 Score=59.45 Aligned_cols=68 Identities=24% Similarity=0.274 Sum_probs=58.1
Q ss_pred EEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCCC
Q psy13945 4 CIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 4 ~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~~ 71 (86)
.++|+..- +.+++|+.|.+|.+||+.++++...+..|.++|.++. ++. ...+++|+.|+++.+.|.|.
T Consensus 248 ~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred HHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 34455443 5688999999999999999999999998999999999 764 77788999999999999983
No 157
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.01 E-value=4.9e-08 Score=53.29 Aligned_cols=83 Identities=33% Similarity=0.593 Sum_probs=69.5
Q ss_pred eeEEEECCCCCEEEEEeC-CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCC-eEEEEeCCCCEEEEeCCCCeEEE-e
Q psy13945 2 IRCIAVSSSGSWIAIGQA-SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDG-TLISSSLDQTISAWHTNDGSLKC-N 77 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~~~~~~-~ 77 (86)
|..++|++++..++.++. ++.+.+|+...+.....+..|...+.++. .|++. .+++++.|+.+.+||.+.+.... .
T Consensus 158 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~ 237 (466)
T COG2319 158 VTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRST 237 (466)
T ss_pred EEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeee
Confidence 567999999998888875 99999999988788888888899999999 88887 55566899999999988777777 5
Q ss_pred ecCCCCC
Q psy13945 78 IQGPTEP 84 (86)
Q Consensus 78 ~~~~~~~ 84 (86)
+.+|...
T Consensus 238 ~~~~~~~ 244 (466)
T COG2319 238 LSGHSDS 244 (466)
T ss_pred cCCCCcc
Confidence 7777654
No 158
>KOG1272|consensus
Probab=99.00 E-value=6.6e-10 Score=62.24 Aligned_cols=74 Identities=14% Similarity=0.273 Sum_probs=63.1
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+.-+|-+-.+-.|...|+|.+|.....+++..+..|.+.|.+++ .++|.++++.+.|..+++||++.-..+.++
T Consensus 257 m~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~ 331 (545)
T KOG1272|consen 257 MKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTY 331 (545)
T ss_pred hhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecccccccee
Confidence 44456666677899999999999888888888899999999999 999999999999999999999876544443
No 159
>KOG4547|consensus
Probab=99.00 E-value=1.5e-08 Score=57.88 Aligned_cols=83 Identities=14% Similarity=0.174 Sum_probs=73.0
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|.++.++.+...|.+++.|..+..|+.........+.+.+..+.++. .|++..++++ .++|.+||+++++.+..|.+
T Consensus 105 v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~a--s~~ik~~~~~~kevv~~ftg 182 (541)
T KOG4547|consen 105 VNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTA--SRQIKVLDIETKEVVITFTG 182 (541)
T ss_pred ceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEec--cceEEEEEccCceEEEEecC
Confidence 56677777778899999999999999999999999998888889999 9998888766 46899999999999999999
Q ss_pred CCCCCC
Q psy13945 81 PTEPVH 86 (86)
Q Consensus 81 ~~~~v~ 86 (86)
|.+.|+
T Consensus 183 h~s~v~ 188 (541)
T KOG4547|consen 183 HGSPVR 188 (541)
T ss_pred CCcceE
Confidence 998874
No 160
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.00 E-value=4e-08 Score=52.40 Aligned_cols=76 Identities=16% Similarity=0.164 Sum_probs=58.5
Q ss_pred EEEECCCCCEEEE-EeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEE-eCCCCEEEEeCCCCeEEEeecC
Q psy13945 4 CIAVSSSGSWIAI-GQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISS-SLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 4 ~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
.++|+|+++.++. ...+..+.+||..+++...... +...+.++. +|++..++++ ..++.|.+||+++++++..+..
T Consensus 211 ~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~ 289 (300)
T TIGR03866 211 GIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV 289 (300)
T ss_pred ceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc
Confidence 5778999987544 4456689999998877765443 345678888 8999988775 5689999999999998877753
No 161
>KOG0268|consensus
Probab=98.95 E-value=1.9e-09 Score=58.93 Aligned_cols=74 Identities=15% Similarity=0.255 Sum_probs=60.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
+|..++|+|.|+-|++|+-|.+|+++....+.....+ ....+.|.++. +-|...+++|+.|+.|++|.....+.
T Consensus 274 AV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asek 349 (433)
T KOG0268|consen 274 AVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEK 349 (433)
T ss_pred eEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhh
Confidence 4789999999999999999999999998766543222 12346789999 99999999999999999998764443
No 162
>KOG1332|consensus
Probab=98.94 E-value=3.8e-09 Score=55.27 Aligned_cols=86 Identities=16% Similarity=0.265 Sum_probs=63.6
Q ss_pred CeeEEEECCC--CCEEEEEeCCCeEEEEEccCC--ce-EEEEeCCccceEEEE-eCC---C-----------CeEEEEeC
Q psy13945 1 LIRCIAVSSS--GSWIAIGQASGVLTLLDLRTG--TS-LASWKGHEGEILQLV-TAD---D-----------GTLISSSL 60 (86)
Q Consensus 1 ~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~-~~~~~~~~~~v~~~~-~~~---~-----------~~~~~~~~ 60 (86)
.|++++|.|. |-.+++++.||.|.+.+.+.. .. .....+|.-.|.++. .|. + ..|++++.
T Consensus 104 SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGc 183 (299)
T KOG1332|consen 104 SVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGC 183 (299)
T ss_pred cceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCC
Confidence 3678899884 467899999999999987643 22 233456777788887 554 2 34899999
Q ss_pred CCCEEEEeCCCCeE--EEeecCCCCCCC
Q psy13945 61 DQTISAWHTNDGSL--KCNIQGPTEPVH 86 (86)
Q Consensus 61 ~~~i~~~~~~~~~~--~~~~~~~~~~v~ 86 (86)
|+.+++|....+.. -+.|.+|.+-||
T Consensus 184 Dn~VkiW~~~~~~w~~e~~l~~H~dwVR 211 (299)
T KOG1332|consen 184 DNLVKIWKFDSDSWKLERTLEGHKDWVR 211 (299)
T ss_pred ccceeeeecCCcchhhhhhhhhcchhhh
Confidence 99999999987642 245788887664
No 163
>KOG2048|consensus
Probab=98.94 E-value=6.8e-08 Score=56.32 Aligned_cols=76 Identities=22% Similarity=0.345 Sum_probs=63.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE--EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA--SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
+|.+++.+|.+..+..|+++|.+..++...++... .+...++++.++. .+++..+++|+.|+.|++||...+..+.
T Consensus 112 ~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~ 190 (691)
T KOG2048|consen 112 AIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLH 190 (691)
T ss_pred ceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEE
Confidence 47889999999999999999988887777666543 3344668999999 8999999999999999999998876665
No 164
>KOG2055|consensus
Probab=98.93 E-value=4.2e-08 Score=55.17 Aligned_cols=70 Identities=14% Similarity=0.199 Sum_probs=58.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCcc-ceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEG-EILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
|..++|+.|++.++..+.+|.|++||+....++.++..... .-.+++ ++++.++++|+..+.+.+||..+
T Consensus 347 v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 347 VSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred EeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccch
Confidence 67889999999999888899999999999988888875322 124556 78999999999999999999653
No 165
>KOG0268|consensus
Probab=98.90 E-value=2.2e-09 Score=58.69 Aligned_cols=70 Identities=19% Similarity=0.272 Sum_probs=62.1
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCc-eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGT-SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+.++|+|++-.++++++|..++.+|..... ++....+|...|..++ +|.|.-+++|+.|.+|+++..+.+
T Consensus 233 N~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~ 304 (433)
T KOG0268|consen 233 NTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHG 304 (433)
T ss_pred cceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCC
Confidence 578999988889999999999999987644 4667788999999999 999999999999999999988654
No 166
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.90 E-value=9e-09 Score=39.43 Aligned_cols=27 Identities=33% Similarity=0.582 Sum_probs=25.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLD 27 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~ 27 (86)
+|.+++|+|+++++++++.|+.+++||
T Consensus 13 ~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 13 SINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp SEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred cEEEEEEecccccceeeCCCCEEEEEC
Confidence 588999999999999999999999997
No 167
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.89 E-value=2.4e-07 Score=49.44 Aligned_cols=77 Identities=16% Similarity=0.237 Sum_probs=57.3
Q ss_pred eeEEEECCCCCEE-EEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWI-AIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+.+++|+|+++.+ +++..++.+++||..+++....+..+.. +..+. +|++..++ ++..++.+.+||+++++.+..+
T Consensus 33 ~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~ 111 (300)
T TIGR03866 33 PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEI 111 (300)
T ss_pred CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEe
Confidence 3568899999865 5677889999999988877665554333 34566 78887665 5556889999999987776665
Q ss_pred c
Q psy13945 79 Q 79 (86)
Q Consensus 79 ~ 79 (86)
.
T Consensus 112 ~ 112 (300)
T TIGR03866 112 P 112 (300)
T ss_pred e
Confidence 4
No 168
>KOG4378|consensus
Probab=98.86 E-value=3.7e-08 Score=56.11 Aligned_cols=84 Identities=12% Similarity=0.082 Sum_probs=68.2
Q ss_pred CeeEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC-CeEEEe
Q psy13945 1 LIRCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND-GSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~ 77 (86)
|...++|+|.++ +|++.+-|..|.+||....+...++. ...+...++ .++|..++.|...+.+..||++. ..++.+
T Consensus 210 P~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v 288 (673)
T KOG4378|consen 210 PCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAV 288 (673)
T ss_pred CcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceE
Confidence 456789999765 67789999999999988666655554 456778888 89999999999999999999985 567778
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
+..|...|
T Consensus 289 ~sah~~sV 296 (673)
T KOG4378|consen 289 RSAHDASV 296 (673)
T ss_pred eeecccce
Confidence 87787655
No 169
>KOG1273|consensus
Probab=98.86 E-value=1.3e-07 Score=51.32 Aligned_cols=50 Identities=16% Similarity=0.207 Sum_probs=42.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD 51 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~ 51 (86)
||.+++|++||+.+++++.|-.+.+||+..+.+...++ ...+|+... +|.
T Consensus 67 pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~ 117 (405)
T KOG1273|consen 67 PITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPR 117 (405)
T ss_pred ceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-ccCccceeeeccc
Confidence 68999999999999999999999999999998877766 456677666 553
No 170
>KOG0290|consensus
Probab=98.86 E-value=1.2e-07 Score=51.02 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=59.7
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCCce---EEEEeCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTS---LASWKGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
|+++..|+. |-++|.+.+-|.+-.+||+.++.. -..+-+|.++|+.++ . .....|++.+.||.++++|+|..+.
T Consensus 152 PlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leH 231 (364)
T KOG0290|consen 152 PLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEH 231 (364)
T ss_pred cccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEeccccc
Confidence 456667765 567899999999999999987633 345567999999999 4 3467889999999999999987554
Q ss_pred E
Q psy13945 75 K 75 (86)
Q Consensus 75 ~ 75 (86)
-
T Consensus 232 S 232 (364)
T KOG0290|consen 232 S 232 (364)
T ss_pred c
Confidence 3
No 171
>KOG0290|consensus
Probab=98.85 E-value=4.8e-08 Score=52.42 Aligned_cols=70 Identities=17% Similarity=0.274 Sum_probs=55.0
Q ss_pred eeEEEECCCC-CEEEEEeCCCeEEEEEccCCc------------------------------------------------
Q psy13945 2 IRCIAVSSSG-SWIAIGQASGVLTLLDLRTGT------------------------------------------------ 32 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~------------------------------------------------ 32 (86)
|..++|..++ ..|++.+.||.++++|++..+
T Consensus 199 V~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~t 278 (364)
T KOG0290|consen 199 VYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCT 278 (364)
T ss_pred eeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCc
Confidence 6788898866 468888999999999986321
Q ss_pred eEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCCC
Q psy13945 33 SLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 33 ~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~~ 71 (86)
...++++|+..|..++ .|. ...+++++.|.+..+||+.+
T Consensus 279 pva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 279 PVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred ceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 1233667888899999 774 77899999999999999864
No 172
>KOG0322|consensus
Probab=98.84 E-value=1.1e-08 Score=54.18 Aligned_cols=86 Identities=14% Similarity=0.094 Sum_probs=62.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccC--CceE--EEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRT--GTSL--ASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~--~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+|.++.|.+.-..-+.|+.+..+.+|.+.. +... ....-.+..+..+. .||+..++++++|+.|+++..++..++
T Consensus 207 pvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pL 286 (323)
T KOG0322|consen 207 PVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPL 286 (323)
T ss_pred cceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCch
Confidence 355666665444456677777788887652 3322 12222334566677 899999999999999999999999999
Q ss_pred EeecCCCCCCC
Q psy13945 76 CNIQGPTEPVH 86 (86)
Q Consensus 76 ~~~~~~~~~v~ 86 (86)
-.++.|++.|+
T Consensus 287 AVLkyHsagvn 297 (323)
T KOG0322|consen 287 AVLKYHSAGVN 297 (323)
T ss_pred hhhhhhhccee
Confidence 99999988764
No 173
>KOG0772|consensus
Probab=98.83 E-value=2e-08 Score=57.23 Aligned_cols=70 Identities=17% Similarity=0.267 Sum_probs=52.8
Q ss_pred eeEEEECCCC-CEEEEEeCCCeEEEEEccCCce-EEEEe--C---CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTS-LASWK--G---HEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~-~~~~~--~---~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
++|-+|+|+. +.+++.+.|+++++||+...+. ...++ . ..-.+.+.. ++++.+++.++.|+.|.+|+...
T Consensus 271 lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~ 348 (641)
T KOG0772|consen 271 LTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGS 348 (641)
T ss_pred eeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCC
Confidence 5788999966 5688999999999999875433 23322 1 122455666 89999999999999999999743
No 174
>KOG0974|consensus
Probab=98.82 E-value=5.6e-08 Score=58.74 Aligned_cols=78 Identities=19% Similarity=0.256 Sum_probs=64.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE-EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA-SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|..+.++.||+++++.++|..+++|++.+.+... ...+|..+++... .|+ .+++++.|.+.++|+. .+..+.++.
T Consensus 178 iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~-~~~~l~~y~ 254 (967)
T KOG0974|consen 178 IFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGV-NGTQLEVYD 254 (967)
T ss_pred eEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEec-ccceehhhh
Confidence 5678899999999999999999999999888765 6678999998887 776 8999999999999964 344444555
Q ss_pred CCC
Q psy13945 80 GPT 82 (86)
Q Consensus 80 ~~~ 82 (86)
.|.
T Consensus 255 ~h~ 257 (967)
T KOG0974|consen 255 EHS 257 (967)
T ss_pred hhh
Confidence 553
No 175
>KOG4328|consensus
Probab=98.82 E-value=3.4e-08 Score=55.42 Aligned_cols=69 Identities=19% Similarity=0.285 Sum_probs=56.3
Q ss_pred eeEEEECCCC-CEEEEEeCCCeEEEEEccCC--c--eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSG-SWIAIGQASGVLTLLDLRTG--T--SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~--~--~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
|.+++++|-. .++++++.|+++++||++.. + +......|...|.+.. +|++.-+++-+.|..|++||..
T Consensus 325 I~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 325 ITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred cceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence 6789999965 57899999999999998632 2 2344456888999999 8987779999999999999983
No 176
>KOG1274|consensus
Probab=98.79 E-value=3e-07 Score=55.35 Aligned_cols=70 Identities=13% Similarity=0.221 Sum_probs=58.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC--ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH--EGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
+..++|+|++..++....++.|.+|+....+.+..++.. ...+..+. +|+|.+++++..++.|.+||..+
T Consensus 191 ~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 191 CTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred eeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 457899999877777888999999999888888877652 33466777 89999999999999999999973
No 177
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.79 E-value=6.7e-07 Score=49.98 Aligned_cols=75 Identities=17% Similarity=0.217 Sum_probs=56.3
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEE-eCCCCEEEEeCCCCeEEEeec
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISS-SLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.+.+++||++++..+.++.+.++|+.+.+.+........ ...++ ++++.+++.+ ...+.+.++|.++.+.++.+.
T Consensus 41 ~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~-~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~ 117 (369)
T PF02239_consen 41 GLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN-PRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIP 117 (369)
T ss_dssp EEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE-EEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE
T ss_pred EEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC-cceEEEcCCCCEEEEEecCCCceeEeccccccceeecc
Confidence 467899999999999999999999999998888775433 46788 9999988755 578899999999988887664
No 178
>KOG2096|consensus
Probab=98.78 E-value=6.8e-08 Score=52.51 Aligned_cols=67 Identities=25% Similarity=0.370 Sum_probs=56.8
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEcc---CCce-----EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLR---TGTS-----LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~-----~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
..+.+|+|+++++++...-+++|..- .|+. .-.+++|+..|...+ +++...+++.+.|++.++||+.
T Consensus 233 ~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 233 DAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred ceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 46789999999999988899999863 3332 346789999999999 8999999999999999999974
No 179
>KOG2096|consensus
Probab=98.77 E-value=1.3e-07 Score=51.51 Aligned_cols=81 Identities=19% Similarity=0.341 Sum_probs=62.4
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC---CC-----eE
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN---DG-----SL 74 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~-----~~ 74 (86)
.+....++.+|.+++.+..|.+|+++ |..+.........-+..+ +|+++.++.++...-+.+|.+- .| ..
T Consensus 192 ~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~r 270 (420)
T KOG2096|consen 192 NIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKR 270 (420)
T ss_pred EEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhh
Confidence 34455567889999999999999988 777777665444445556 9999999999999999999862 33 35
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
...+++|++.|
T Consensus 271 vf~LkGH~saV 281 (420)
T KOG2096|consen 271 VFSLKGHQSAV 281 (420)
T ss_pred hheeccchhhe
Confidence 56778888765
No 180
>KOG0307|consensus
Probab=98.76 E-value=1.1e-08 Score=62.14 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=64.2
Q ss_pred CeeEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEE--eCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 1 LIRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASW--KGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 1 ~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+|..+.|++.. +++++|+++|.|.+||+...+..... ....+.|.+++ .. ....|++++.+++.-+||++..+.+
T Consensus 118 ~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pi 197 (1049)
T KOG0307|consen 118 PVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPI 197 (1049)
T ss_pred ceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcc
Confidence 47889999965 49999999999999999865543333 22456788888 54 4667788999999999999988777
Q ss_pred EeecCCCC
Q psy13945 76 CNIQGPTE 83 (86)
Q Consensus 76 ~~~~~~~~ 83 (86)
-.+..+..
T Consensus 198 i~ls~~~~ 205 (1049)
T KOG0307|consen 198 IKLSDTPG 205 (1049)
T ss_pred cccccCCC
Confidence 77766554
No 181
>KOG1334|consensus
Probab=98.76 E-value=4.9e-09 Score=59.16 Aligned_cols=65 Identities=18% Similarity=0.317 Sum_probs=58.5
Q ss_pred ECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 7 VSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 7 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
|-|..+++++|++.|.|.+|+-.+++.+.-+.+...-|.|+. +|.-+.|++.+.|..|+||....
T Consensus 402 fGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 402 FGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred ccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCc
Confidence 356778999999999999999888888888888888999999 99999999999999999998743
No 182
>KOG1009|consensus
Probab=98.75 E-value=1.1e-07 Score=52.79 Aligned_cols=70 Identities=11% Similarity=0.163 Sum_probs=58.2
Q ss_pred CeeEEEECCCCC-EEEEEeCCCeEEEEEccCC-------c--eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 1 LIRCIAVSSSGS-WIAIGQASGVLTLLDLRTG-------T--SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 1 ~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~-------~--~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
|+..+.|..+.. .+++++.|..+++|-+... + ....+..|...|..+. +|++..+++|+.++.+.+|..
T Consensus 15 pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~ 94 (434)
T KOG1009|consen 15 PVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQ 94 (434)
T ss_pred ceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEe
Confidence 567888888665 8999999999999976422 1 1346678999999999 999999999999999999975
Q ss_pred C
Q psy13945 70 N 70 (86)
Q Consensus 70 ~ 70 (86)
.
T Consensus 95 ~ 95 (434)
T KOG1009|consen 95 G 95 (434)
T ss_pred c
Confidence 4
No 183
>KOG0270|consensus
Probab=98.74 E-value=4.1e-07 Score=51.03 Aligned_cols=84 Identities=17% Similarity=0.326 Sum_probs=64.0
Q ss_pred CeeEEEECCC-CCEEEEEeCCCeEEEEEccCCce-EEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCC-CeEE
Q psy13945 1 LIRCIAVSSS-GSWIAIGQASGVLTLLDLRTGTS-LASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTND-GSLK 75 (86)
Q Consensus 1 ~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~-~~~~ 75 (86)
.|.++.|+|. ...+++|+.|+++.+.|.+.... ...++ ..+.|-.+. .+ +...++++..|++++-+|+|. ++++
T Consensus 288 ~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~v 366 (463)
T KOG0270|consen 288 KVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPV 366 (463)
T ss_pred ceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCce
Confidence 3788999985 46789999999999999874222 23333 234455666 54 466778889999999999996 5999
Q ss_pred EeecCCCCCC
Q psy13945 76 CNIQGPTEPV 85 (86)
Q Consensus 76 ~~~~~~~~~v 85 (86)
+++..|.+.|
T Consensus 367 wt~~AHd~~I 376 (463)
T KOG0270|consen 367 WTLKAHDDEI 376 (463)
T ss_pred eEEEeccCCc
Confidence 9999998776
No 184
>KOG2695|consensus
Probab=98.74 E-value=2.2e-08 Score=54.74 Aligned_cols=79 Identities=15% Similarity=0.229 Sum_probs=63.0
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCC-----ceEEEEeCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCCCCeE--
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTG-----TSLASWKGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTNDGSL-- 74 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~~-- 74 (86)
++.|...+++++.|.+.|.|..+|++.+ +...++ -|...|+++. - .+.+.++..+.+++|.+||.+--++
T Consensus 257 AlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~ 335 (425)
T KOG2695|consen 257 ALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKK 335 (425)
T ss_pred HHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhccc
Confidence 4556667899999999999999999865 333343 3778888888 4 4788889999999999999987666
Q ss_pred -EEeecCCCC
Q psy13945 75 -KCNIQGPTE 83 (86)
Q Consensus 75 -~~~~~~~~~ 83 (86)
+...++|.+
T Consensus 336 ~V~qYeGHvN 345 (425)
T KOG2695|consen 336 SVMQYEGHVN 345 (425)
T ss_pred ceeeeecccc
Confidence 888888864
No 185
>KOG0642|consensus
Probab=98.74 E-value=7.1e-08 Score=55.25 Aligned_cols=82 Identities=16% Similarity=0.245 Sum_probs=74.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+.-+.++|.+...+++..++.++++|..+++.+....+|...+.+++ .|++..+.+++.|+.+++|.+....|+.....
T Consensus 492 in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~ 571 (577)
T KOG0642|consen 492 INKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTA 571 (577)
T ss_pred cceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchheeecccc
Confidence 34567788888899999999999999999999999999999999999 99999999999999999999988888888877
Q ss_pred CCC
Q psy13945 81 PTE 83 (86)
Q Consensus 81 ~~~ 83 (86)
|+.
T Consensus 572 ~r~ 574 (577)
T KOG0642|consen 572 HRK 574 (577)
T ss_pred ccc
Confidence 764
No 186
>KOG1063|consensus
Probab=98.74 E-value=1.5e-07 Score=55.22 Aligned_cols=69 Identities=26% Similarity=0.381 Sum_probs=61.3
Q ss_pred eeEEEECCCCCEEEEEeCCC-----eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASG-----VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
|.+++.+|++++++++.... .|++|+..+-...+.+.+|.-.|+.+. +|++..+++.+.|++..+|...
T Consensus 528 v~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~ 602 (764)
T KOG1063|consen 528 VYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQ 602 (764)
T ss_pred EEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeee
Confidence 68999999999999877653 488999887777788999999999999 9999999999999999999864
No 187
>KOG0321|consensus
Probab=98.72 E-value=1.1e-07 Score=55.37 Aligned_cols=75 Identities=25% Similarity=0.350 Sum_probs=62.1
Q ss_pred CCEEEEEeCCCeEEEEEccCCce------EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe--ecCC
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGTS------LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN--IQGP 81 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~ 81 (86)
.+.|+.+.++|.+.++|...... +..+.+|...|..+. .|....|++++.|.++++||+.++.+... +.+|
T Consensus 64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH 143 (720)
T KOG0321|consen 64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGH 143 (720)
T ss_pred cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeeccc
Confidence 36788999999999999764322 355678999999999 88888899999999999999999988876 7888
Q ss_pred CCCC
Q psy13945 82 TEPV 85 (86)
Q Consensus 82 ~~~v 85 (86)
...|
T Consensus 144 ~~Sv 147 (720)
T KOG0321|consen 144 TGSV 147 (720)
T ss_pred cccc
Confidence 7665
No 188
>KOG0307|consensus
Probab=98.72 E-value=9.4e-08 Score=58.27 Aligned_cols=79 Identities=27% Similarity=0.423 Sum_probs=61.9
Q ss_pred eeEEEECCCC-CEEEEEeCC---CeEEEEEccC-CceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSG-SWIAIGQAS---GVLTLLDLRT-GTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~---~~v~~~~~~~-~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
+..+.|+|++ ..++++++| -.|.+||++. ...+..+.+|...|.++. .+ |..++++++.|+.+.+|+.++++.
T Consensus 209 ~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEv 288 (1049)
T KOG0307|consen 209 CSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEV 288 (1049)
T ss_pred eeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceE
Confidence 4689999987 345544443 3589999874 445677789999999999 65 558889999999999999999988
Q ss_pred EEeecC
Q psy13945 75 KCNIQG 80 (86)
Q Consensus 75 ~~~~~~ 80 (86)
+..+-.
T Consensus 289 l~~~p~ 294 (1049)
T KOG0307|consen 289 LGELPA 294 (1049)
T ss_pred eeecCC
Confidence 877644
No 189
>KOG2111|consensus
Probab=98.71 E-value=5.4e-07 Score=48.85 Aligned_cols=69 Identities=22% Similarity=0.347 Sum_probs=56.9
Q ss_pred CEEE-EEeCCCeEEEEEccCCce--EEEEeCCccceEEEE-eCCCCeEEEEeCCCC-EEEEeCCCCeEEEeecC
Q psy13945 12 SWIA-IGQASGVLTLLDLRTGTS--LASWKGHEGEILQLV-TADDGTLISSSLDQT-ISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 12 ~~~~-~~~~~~~v~~~~~~~~~~--~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~ 80 (86)
.+++ .|...|.|.+.|+...+. .....+|...|.|+. ..+|..+++++.+|+ |++||.++|..+++++.
T Consensus 149 ~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RR 222 (346)
T KOG2111|consen 149 SLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRR 222 (346)
T ss_pred eEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeec
Confidence 4444 466678999999875443 467789999999999 999999999999997 68999999999988863
No 190
>KOG0974|consensus
Probab=98.71 E-value=1.6e-07 Score=56.86 Aligned_cols=80 Identities=25% Similarity=0.343 Sum_probs=64.9
Q ss_pred EECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE-eecCCCC
Q psy13945 6 AVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC-NIQGPTE 83 (86)
Q Consensus 6 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~ 83 (86)
.++++.-++++|.--+.+.+|+....+....+.+|.+.++++. +.++..+++.+.|.++++|++.+.+... +.-+|+.
T Consensus 140 g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsa 219 (967)
T KOG0974|consen 140 GDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSA 219 (967)
T ss_pred eccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccc
Confidence 3455666788898899999999875444557889999999999 9999999999999999999998876554 5556765
Q ss_pred CC
Q psy13945 84 PV 85 (86)
Q Consensus 84 ~v 85 (86)
.|
T Consensus 220 Rv 221 (967)
T KOG0974|consen 220 RV 221 (967)
T ss_pred ee
Confidence 43
No 191
>KOG2445|consensus
Probab=98.70 E-value=2e-07 Score=50.36 Aligned_cols=79 Identities=16% Similarity=0.305 Sum_probs=61.1
Q ss_pred CeeEEEECCCC----CEEEEEeCCCeEEEEEccCC--------------------ceEEEEeCCccceEEEE-eCCCCeE
Q psy13945 1 LIRCIAVSSSG----SWIAIGQASGVLTLLDLRTG--------------------TSLASWKGHEGEILQLV-TADDGTL 55 (86)
Q Consensus 1 ~i~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~--------------------~~~~~~~~~~~~v~~~~-~~~~~~~ 55 (86)
||+.++|.|+- +++++++.|| |+||.+... +.+..+..|+++|+.+. .-.|..+
T Consensus 225 pI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiL 303 (361)
T KOG2445|consen 225 PIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTIL 303 (361)
T ss_pred cceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEE
Confidence 68899999953 6789999999 999987631 11334567889999999 8899999
Q ss_pred EEEeCCCCEEEEeCC---CCeEEEeecC
Q psy13945 56 ISSSLDQTISAWHTN---DGSLKCNIQG 80 (86)
Q Consensus 56 ~~~~~~~~i~~~~~~---~~~~~~~~~~ 80 (86)
.+.+.||.+++|... .-+|...+..
T Consensus 304 sStGdDG~VRLWkany~n~~kC~sv~~~ 331 (361)
T KOG2445|consen 304 SSTGDDGCVRLWKANYNNLWKCTSVLKA 331 (361)
T ss_pred eecCCCceeeehhhhhhhhheeeeEEec
Confidence 999999999999753 2356665543
No 192
>KOG0280|consensus
Probab=98.70 E-value=3.5e-07 Score=49.22 Aligned_cols=73 Identities=19% Similarity=0.265 Sum_probs=55.0
Q ss_pred EEEECC-CCCEEEEEeCCCeEEEEEccC-CceE-EEEeCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCCC-CeEEE
Q psy13945 4 CIAVSS-SGSWIAIGQASGVLTLLDLRT-GTSL-ASWKGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTND-GSLKC 76 (86)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~-~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~~-~~~~~ 76 (86)
...|+. +.+++.+|++|+.+.-||++. ++.+ ..-+.|...|.++. + |.+..+++|+.|-.|++||.|. +++++
T Consensus 170 ta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~ 248 (339)
T KOG0280|consen 170 TAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLF 248 (339)
T ss_pred eeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccc
Confidence 345554 346788999999999999983 3333 23456778889998 5 5688899999999999999984 55443
No 193
>KOG2919|consensus
Probab=98.70 E-value=2e-07 Score=50.78 Aligned_cols=82 Identities=21% Similarity=0.313 Sum_probs=66.6
Q ss_pred eeEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeC-CCCEEEEeCCC-CeEEEe
Q psy13945 2 IRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSL-DQTISAWHTND-GSLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~-~~~i~~~~~~~-~~~~~~ 77 (86)
|.|++|+|-. ..++.++=...+=++.-..+.++..+.+|.+.|+.+. .+++..+.+|.. +..|.+||+|. +.++..
T Consensus 210 isc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~ 289 (406)
T KOG2919|consen 210 ISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYA 289 (406)
T ss_pred eeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhh
Confidence 5789999955 5788888888888888888888888889999999999 999998887764 67899999986 456666
Q ss_pred ecCCCC
Q psy13945 78 IQGPTE 83 (86)
Q Consensus 78 ~~~~~~ 83 (86)
+..|..
T Consensus 290 L~rhv~ 295 (406)
T KOG2919|consen 290 LERHVG 295 (406)
T ss_pred hhhhcc
Confidence 665543
No 194
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.70 E-value=5e-07 Score=52.14 Aligned_cols=69 Identities=20% Similarity=0.275 Sum_probs=55.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+.+.+++|+...++.|..||.+.+||...+..... + ..-....++ +|++..++.++..|.+.+||+.-.
T Consensus 262 v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-k-a~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 262 VICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-K-AEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-e-ecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 67899999999999999999999999765533222 2 223346778 999999999999999999998543
No 195
>KOG4328|consensus
Probab=98.69 E-value=3.2e-07 Score=51.68 Aligned_cols=72 Identities=22% Similarity=0.328 Sum_probs=58.4
Q ss_pred CeeEEEECCCC--CEEEEEeCCCeEEEEEccCC----ceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSG--SWIAIGQASGVLTLLDLRTG----TSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+|++++|+|.. .++++|+..|.|-+||+... .-...+..|..+|.++. +| +...+++.+.|++|++-|++.+
T Consensus 188 Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~ 267 (498)
T KOG4328|consen 188 RITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGN 267 (498)
T ss_pred ceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecch
Confidence 58899999955 57889999999999999522 22456677889999999 76 5678899999999999998643
No 196
>KOG2106|consensus
Probab=98.68 E-value=9.1e-07 Score=50.73 Aligned_cols=69 Identities=20% Similarity=0.337 Sum_probs=56.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCC-ceEEEE-eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTG-TSLASW-KGHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~-~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
++++++|+|+|..++.|+.|..|++|.++.. ....+. +.+..+|..+. +++++.+.+-+.|..|..|..
T Consensus 449 ~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~ 520 (626)
T KOG2106|consen 449 QLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKP 520 (626)
T ss_pred ceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEcc
Confidence 5789999999999999999999999987643 332222 23448899999 999999999999999999954
No 197
>KOG4227|consensus
Probab=98.68 E-value=3.3e-07 Score=51.27 Aligned_cols=78 Identities=14% Similarity=0.130 Sum_probs=64.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEcc------CCceEEEEeC-CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLR------TGTSLASWKG-HEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~~-~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
|.++.|+.+++++++|++|..+++|+.. +.++++.... |...|+|+. ......+.+|..++++...|+.+.+
T Consensus 59 iNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~q 138 (609)
T KOG4227|consen 59 INALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQ 138 (609)
T ss_pred cceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccce
Confidence 5788999999999999999999999875 2344444433 457899999 7788899999999999999999988
Q ss_pred EEEeec
Q psy13945 74 LKCNIQ 79 (86)
Q Consensus 74 ~~~~~~ 79 (86)
.+.++.
T Consensus 139 si~V~~ 144 (609)
T KOG4227|consen 139 SIYVAN 144 (609)
T ss_pred eeeeec
Confidence 877764
No 198
>KOG0649|consensus
Probab=98.67 E-value=4e-07 Score=48.07 Aligned_cols=83 Identities=18% Similarity=0.222 Sum_probs=57.8
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE------EEeC--C-----ccceEEEE-eCCCCeEEEEeCCCCEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA------SWKG--H-----EGEILQLV-TADDGTLISSSLDQTISA 66 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------~~~~--~-----~~~v~~~~-~~~~~~~~~~~~~~~i~~ 66 (86)
||..++|. ..++++++ ||.++-|......... .... + -..|.++. .|...-++.++.|+.+..
T Consensus 64 piy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~ 140 (325)
T KOG0649|consen 64 PIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQ 140 (325)
T ss_pred Ceeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEE
Confidence 46677776 23444444 5999988765332210 0011 1 13567777 788777788889999999
Q ss_pred EeCCCCeEEEeecCCCCCCC
Q psy13945 67 WHTNDGSLKCNIQGPTEPVH 86 (86)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~v~ 86 (86)
||+++|+...++++|+++|+
T Consensus 141 ~dlE~G~i~r~~rGHtDYvH 160 (325)
T KOG0649|consen 141 VDLEDGRIQREYRGHTDYVH 160 (325)
T ss_pred EEecCCEEEEEEcCCcceee
Confidence 99999999999999998874
No 199
>KOG1963|consensus
Probab=98.67 E-value=4.6e-07 Score=54.09 Aligned_cols=72 Identities=21% Similarity=0.410 Sum_probs=61.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccC--C-c-eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRT--G-T-SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~-~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
+++.+++|++++++++..+|.|.+|.-.. . . ....+.-|..+|.++. +++|..+++|+..+.+-.|...+++
T Consensus 208 ~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~ 284 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK 284 (792)
T ss_pred ceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC
Confidence 57899999999999999999999996322 1 2 2345667889999999 9999999999999999999998765
No 200
>KOG3881|consensus
Probab=98.66 E-value=7.5e-07 Score=49.38 Aligned_cols=85 Identities=16% Similarity=0.137 Sum_probs=68.8
Q ss_pred CeeEEEECCC--CCEEEEEeCCCeEEEEEccCC-ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 1 LIRCIAVSSS--GSWIAIGQASGVLTLLDLRTG-TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
+++.+.|-+. ...|+++..-+.+++||.+.+ .+...+.-....+.++. .|++..++++...+.+..+|++.++...
T Consensus 204 W~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g 283 (412)
T KOG3881|consen 204 WITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLG 283 (412)
T ss_pred eeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeec
Confidence 3567888876 678999999999999998854 34566666678899999 9999999999999999999999988776
Q ss_pred e-ecCCCCCC
Q psy13945 77 N-IQGPTEPV 85 (86)
Q Consensus 77 ~-~~~~~~~v 85 (86)
. +.+-.+.|
T Consensus 284 ~~~kg~tGsi 293 (412)
T KOG3881|consen 284 CGLKGITGSI 293 (412)
T ss_pred cccCCccCCc
Confidence 5 55544443
No 201
>KOG2139|consensus
Probab=98.65 E-value=8.7e-07 Score=49.02 Aligned_cols=70 Identities=17% Similarity=0.297 Sum_probs=54.6
Q ss_pred CeeEEEECCCCCEEEEEeC-CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQA-SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
+|+.+.|.+||..+++++- +..+.+||.+++..+-......+.+.-+. +|++.++..+..|+..++|+..
T Consensus 197 pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~ 268 (445)
T KOG2139|consen 197 PVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQEN 268 (445)
T ss_pred eeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhc
Confidence 5889999999988776554 57899999988765433322345566677 9999999999999999999543
No 202
>KOG0650|consensus
Probab=98.64 E-value=1.9e-07 Score=54.25 Aligned_cols=46 Identities=24% Similarity=0.382 Sum_probs=42.0
Q ss_pred EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 34 LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 34 ~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
...+.+|++.|.++. .|.+.++++|+.|+++++|.+.++.|+.++.
T Consensus 393 ~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~ 439 (733)
T KOG0650|consen 393 ALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ 439 (733)
T ss_pred eeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe
Confidence 345789999999999 9999999999999999999999999998764
No 203
>KOG1524|consensus
Probab=98.64 E-value=8.2e-07 Score=51.37 Aligned_cols=80 Identities=19% Similarity=0.412 Sum_probs=61.7
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.|++|.|+.+.++-. ..+.+.+--+.....+..+++|.+-|.++. ++....+++|+.|-..++||. .|..+++..
T Consensus 147 ~v~c~~W~p~S~~vl~c-~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~ 224 (737)
T KOG1524|consen 147 SIRCARWAPNSNSIVFC-QGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSA 224 (737)
T ss_pred eeEEEEECCCCCceEEe-cCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCC
Confidence 58899999987654432 234566655555566788999999999999 999999999999999999995 466666555
Q ss_pred CCC
Q psy13945 80 GPT 82 (86)
Q Consensus 80 ~~~ 82 (86)
.|.
T Consensus 225 ~~e 227 (737)
T KOG1524|consen 225 AEE 227 (737)
T ss_pred hhc
Confidence 544
No 204
>KOG2055|consensus
Probab=98.62 E-value=8.9e-07 Score=50.09 Aligned_cols=76 Identities=24% Similarity=0.362 Sum_probs=65.7
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
....++++++|+..+..|.|.+....+++.+..++. .+.+..+. +.++..++..+.++.|.+||+++..+++.+..
T Consensus 308 ~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D 384 (514)
T KOG2055|consen 308 RFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI-EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVD 384 (514)
T ss_pred eeEecCCCCeEEEcccCceEEeehhhhhhhhheeee-ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEee
Confidence 345688999999999999999999999998888875 56777777 78889999999999999999999988888764
No 205
>KOG1188|consensus
Probab=98.61 E-value=3.5e-07 Score=49.96 Aligned_cols=61 Identities=25% Similarity=0.364 Sum_probs=50.5
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC--CCCeEEEEeCCCCEEEEeCCCC
Q psy13945 12 SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA--DDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 12 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~--~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
..++++-..+.+++||..++..+..++++...+..+. .. ....+.+++.|++|++||+|..
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~ 104 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQ 104 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecc
Confidence 4578888899999999999999999998877666655 32 5677889999999999999864
No 206
>KOG1523|consensus
Probab=98.60 E-value=1e-06 Score=47.90 Aligned_cols=70 Identities=14% Similarity=0.258 Sum_probs=62.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCC---ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTG---TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
||+|.+|++|+..++.+.....+.+|..... +...+++.|...|+.++ .|..+.+++++.|..-.+|...
T Consensus 12 pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~ 85 (361)
T KOG1523|consen 12 PITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQP 85 (361)
T ss_pred ceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccC
Confidence 6899999999999999999999999986543 45678888999999999 9999999999999999999883
No 207
>KOG2321|consensus
Probab=98.59 E-value=9.7e-07 Score=51.28 Aligned_cols=76 Identities=12% Similarity=0.218 Sum_probs=60.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeC------Cc-----cceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKG------HE-----GEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------~~-----~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
++++..++...++++|..++.+-.||.........+.. +. ..|+++. +.++-.+..|..++.+.++|+
T Consensus 178 lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDL 257 (703)
T KOG2321|consen 178 LNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDL 257 (703)
T ss_pred ceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEc
Confidence 57888899999999999999999999887655444432 11 2377888 666889999999999999999
Q ss_pred CCCeEEEe
Q psy13945 70 NDGSLKCN 77 (86)
Q Consensus 70 ~~~~~~~~ 77 (86)
+..+++..
T Consensus 258 Ra~~pl~~ 265 (703)
T KOG2321|consen 258 RASKPLLV 265 (703)
T ss_pred ccCCceee
Confidence 98776654
No 208
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=98.59 E-value=5.5e-06 Score=45.35 Aligned_cols=83 Identities=30% Similarity=0.497 Sum_probs=64.7
Q ss_pred eEEEE-CCCCC-EEEE-EeCCCeEEEEEccC-CceEEEEeCCccceEEEE-eCCCCeEEEEeC-CCCEEEEeCCCCeEEE
Q psy13945 3 RCIAV-SSSGS-WIAI-GQASGVLTLLDLRT-GTSLASWKGHEGEILQLV-TADDGTLISSSL-DQTISAWHTNDGSLKC 76 (86)
Q Consensus 3 ~~~~~-~~~~~-~~~~-~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~-~~~i~~~~~~~~~~~~ 76 (86)
..+.+ .+++. .+.. +..++.+.+|+... ......+..|...+..+. .+++..++.++. ++.+++|+...+..+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (466)
T COG2319 113 SKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLS 192 (466)
T ss_pred eeEEEECCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEE
Confidence 33444 66676 4444 34489999999887 677788888999999898 899888888875 9999999999888888
Q ss_pred eecCCCCCC
Q psy13945 77 NIQGPTEPV 85 (86)
Q Consensus 77 ~~~~~~~~v 85 (86)
.+.+|...|
T Consensus 193 ~~~~~~~~v 201 (466)
T COG2319 193 TLAGHTDPV 201 (466)
T ss_pred eeccCCCce
Confidence 887776554
No 209
>KOG2106|consensus
Probab=98.59 E-value=4e-06 Score=48.23 Aligned_cols=69 Identities=22% Similarity=0.315 Sum_probs=54.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
++.|++|+|.| .++.|...|...+.|..+...+. ....+.++.++. +|++..++.++.|+.|.++.+..
T Consensus 409 ~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~-~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~ 478 (626)
T KOG2106|consen 409 PAECADFHPSG-VVAVGTATGRWFVLDTETQDLVT-IHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSA 478 (626)
T ss_pred ceeEeeccCcc-eEEEeeccceEEEEecccceeEE-EEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECC
Confidence 45678888888 77888888888888877644333 333378899999 99999999999999999998764
No 210
>KOG0644|consensus
Probab=98.58 E-value=1.4e-08 Score=60.70 Aligned_cols=65 Identities=29% Similarity=0.458 Sum_probs=57.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
|+.++.+.++..+++++.|..|++|.+.++.++..+.+|++.|++++ +|-. +.+.|+++++||.+
T Consensus 235 itdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 235 ITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred cchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 45667777778899999999999999999999999999999999998 7764 67889999999987
No 211
>KOG4227|consensus
Probab=98.54 E-value=2.1e-06 Score=48.18 Aligned_cols=72 Identities=18% Similarity=0.256 Sum_probs=62.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeC--CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKG--HEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
|.|++|...++.+++|.+++++..-|+.+.+.+..+.. ..+.|+.+. +|....+++.+.++.+.+||.+...
T Consensus 108 IF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 108 IFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred eEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence 78999999999999999999999999998887766543 335899999 9999999999999999999998654
No 212
>KOG0280|consensus
Probab=98.52 E-value=3.1e-06 Score=45.73 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=59.7
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceE--EEEeCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCC-CCeEEEe
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSL--ASWKGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTN-DGSLKCN 77 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~ 77 (86)
.++.|++.+..++++..+|.+.+.+....... +.++.|.-+.+... + .+...+.+|+.|+.+..||+| .++.++.
T Consensus 125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~ 204 (339)
T KOG0280|consen 125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWH 204 (339)
T ss_pred eEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeee
Confidence 36788888888999999999987665444333 36788888877776 3 456788999999999999999 4444433
Q ss_pred -ecCCCCC
Q psy13945 78 -IQGPTEP 84 (86)
Q Consensus 78 -~~~~~~~ 84 (86)
.+-|...
T Consensus 205 n~kvH~~G 212 (339)
T KOG0280|consen 205 NSKVHTSG 212 (339)
T ss_pred cceeeecc
Confidence 3344433
No 213
>KOG1310|consensus
Probab=98.49 E-value=1.5e-06 Score=50.48 Aligned_cols=63 Identities=27% Similarity=0.410 Sum_probs=58.1
Q ss_pred CCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 9 SSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 9 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
..++++++|++||...+|+-.++.....+.+...-+.|+. +|....+++.+-|.+|+||....
T Consensus 634 qrgeyiasgSddgr~fiwek~tg~i~av~~gdssivnciqghP~~~~latSgiDstiKIwsp~a 697 (758)
T KOG1310|consen 634 QRGEYIASGSDDGRFFIWEKLTGSILAVIHGDSSIVNCIQGHPRCPTLATSGIDSTIKIWSPEA 697 (758)
T ss_pred cCCCeeeEecCCCceEEeecCCcceEEEeeCchhheeeccCCCCCceeeeccCccceEEecccC
Confidence 4578999999999999999999999999999999999999 99999999999999999999654
No 214
>KOG0650|consensus
Probab=98.49 E-value=2.5e-07 Score=53.79 Aligned_cols=83 Identities=11% Similarity=0.135 Sum_probs=67.0
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC-CeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND-GSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~ 79 (86)
|.++.|+|...+++.+. ...|++||+........+......+.+++ +|.|..++.++.|+.+..+|+.- .++.+.++
T Consensus 569 vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr 647 (733)
T KOG0650|consen 569 VQRVKFHPSKPYLFVAT-QRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLR 647 (733)
T ss_pred eeEEEecCCCceEEEEe-ccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhh
Confidence 56889999888877765 67899999987776666665667788999 99999999999999999999864 35667777
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
.|...|
T Consensus 648 ~H~~av 653 (733)
T KOG0650|consen 648 LHEKAV 653 (733)
T ss_pred hhhhhh
Confidence 776554
No 215
>KOG4378|consensus
Probab=98.43 E-value=7e-06 Score=47.32 Aligned_cols=82 Identities=11% Similarity=0.164 Sum_probs=64.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCc-cceEEEE-eCCCC-eEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHE-GEILQLV-TADDG-TLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
|+++.++-..++|++++..|.|.+..+.++.....+.... +.|.-+. ++..+ ++.+++.++.+.+||.....+.+.+
T Consensus 124 vt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~ 203 (673)
T KOG4378|consen 124 VTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHA 203 (673)
T ss_pred eEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccch
Confidence 7889999889999999999999999999888877777654 4555667 77655 4568899999999999766666554
Q ss_pred -cCCCC
Q psy13945 79 -QGPTE 83 (86)
Q Consensus 79 -~~~~~ 83 (86)
+.|..
T Consensus 204 ~~~HsA 209 (673)
T KOG4378|consen 204 SEAHSA 209 (673)
T ss_pred hhhccC
Confidence 44554
No 216
>KOG1523|consensus
Probab=98.42 E-value=4.2e-06 Score=45.64 Aligned_cols=72 Identities=7% Similarity=0.000 Sum_probs=60.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCC---ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTG---TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
.|++++|+|..+.|++++.|.--++|....+ +....+..++....++. +|.+..|+.|+..+.|.+|.++..
T Consensus 57 ~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~E 132 (361)
T KOG1523|consen 57 IVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQE 132 (361)
T ss_pred ceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecc
Confidence 3788999999999999999999999998433 23445556778889999 999999999999999999988643
No 217
>KOG1963|consensus
Probab=98.38 E-value=4.8e-06 Score=50.01 Aligned_cols=70 Identities=26% Similarity=0.346 Sum_probs=58.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
.|.++.|+++|.++++|+..+.+.+|...+++ .+-+..-...|..+. +|++........|+.|.+....+
T Consensus 253 ~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~d 323 (792)
T KOG1963|consen 253 EVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASD 323 (792)
T ss_pred ccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccc
Confidence 37899999999999999999999999998887 333344567788888 99999999888999988876543
No 218
>KOG1587|consensus
Probab=98.36 E-value=1.1e-05 Score=47.37 Aligned_cols=71 Identities=24% Similarity=0.424 Sum_probs=52.0
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCCce--EEEE----eCCccceEEEE-eCC--CCeEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTS--LASW----KGHEGEILQLV-TAD--DGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~--~~~~----~~~~~~v~~~~-~~~--~~~~~~~~~~~~i~~~~~~ 70 (86)
+|+++.|+| +..+++.|.-+|.|.+||+..+.. ...+ ..|...+..+. -.+ +.-+++++.|+.|..|+++
T Consensus 244 ~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~ 323 (555)
T KOG1587|consen 244 EVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTD 323 (555)
T ss_pred ceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeecc
Confidence 478999999 456788888999999999976543 2221 23566676665 333 3558899999999999876
Q ss_pred C
Q psy13945 71 D 71 (86)
Q Consensus 71 ~ 71 (86)
.
T Consensus 324 ~ 324 (555)
T KOG1587|consen 324 M 324 (555)
T ss_pred c
Confidence 4
No 219
>KOG2695|consensus
Probab=98.35 E-value=2.2e-06 Score=47.24 Aligned_cols=77 Identities=22% Similarity=0.415 Sum_probs=55.7
Q ss_pred eEEEECC-CCCEEEEEeCCCeEEEEEccCCce---EEEEeCCccceEEEE---eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 3 RCIAVSS-SGSWIAIGQASGVLTLLDLRTGTS---LASWKGHEGEILQLV---TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 3 ~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+++..-. +++.+.+.+.+++|.+||.+--+. +..+.+|-..-.-+. .++...+++++.|...++|.++.+..+
T Consensus 302 tslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl 381 (425)
T KOG2695|consen 302 TSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLL 381 (425)
T ss_pred hhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCcee
Confidence 3443333 678889999999999999874443 667777754333222 466778888999999999999988766
Q ss_pred Eeec
Q psy13945 76 CNIQ 79 (86)
Q Consensus 76 ~~~~ 79 (86)
.++.
T Consensus 382 ~tip 385 (425)
T KOG2695|consen 382 CTIP 385 (425)
T ss_pred eccC
Confidence 6553
No 220
>KOG1409|consensus
Probab=98.33 E-value=3.9e-06 Score=46.24 Aligned_cols=72 Identities=18% Similarity=0.316 Sum_probs=60.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCce-EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS-LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
.+.+++|.+..+.++++..+..+.+||+.-.+- ...+.+|...|..+. .+....+.+++.|+.|.+|+++..
T Consensus 199 ~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 199 EVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVK 272 (404)
T ss_pred ceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccce
Confidence 367899999999999999999999999875443 456678888888887 677788899999999999998643
No 221
>KOG0771|consensus
Probab=98.30 E-value=1.1e-05 Score=45.15 Aligned_cols=70 Identities=26% Similarity=0.349 Sum_probs=60.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
|++++.+.||++++.|..+|.|.+++..+.+..+-. +.|...|+.+. .|+.+.+++-+.+....+..+..
T Consensus 284 iSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 284 ISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred ceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 689999999999999999999999998877765544 56888999999 99999999988888888876643
No 222
>KOG1272|consensus
Probab=98.29 E-value=3.1e-07 Score=51.99 Aligned_cols=85 Identities=18% Similarity=0.222 Sum_probs=72.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|..+.|-|.--++++++..|.+..-|+.+|+....+....+.+..+. .|-+..+-.|...+++.+|.....+++-.+.+
T Consensus 212 v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLc 291 (545)
T KOG1272|consen 212 VARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILC 291 (545)
T ss_pred hhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHh
Confidence 44567888777899999999999999999998877766667777888 89999999999999999999998888888888
Q ss_pred CCCCCC
Q psy13945 81 PTEPVH 86 (86)
Q Consensus 81 ~~~~v~ 86 (86)
|.+.|+
T Consensus 292 H~g~V~ 297 (545)
T KOG1272|consen 292 HRGPVS 297 (545)
T ss_pred cCCCcc
Confidence 887764
No 223
>KOG1240|consensus
Probab=98.28 E-value=2.4e-05 Score=49.24 Aligned_cols=68 Identities=18% Similarity=0.263 Sum_probs=51.8
Q ss_pred EEEECC-CCCEEEEEeCCCeEEEEEccCCc-------eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 4 CIAVSS-SGSWIAIGQASGVLTLLDLRTGT-------SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~-------~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
.++.++ ++.++++|+.||+|++|+..... ...++.....++.++. .+.+..++.++.||.+++.++..
T Consensus 1053 k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~ 1129 (1431)
T KOG1240|consen 1053 KLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDH 1129 (1431)
T ss_pred ceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccc
Confidence 445554 45899999999999999986321 1233443456788888 88999999999999999998764
No 224
>KOG1538|consensus
Probab=98.28 E-value=7.4e-06 Score=48.90 Aligned_cols=67 Identities=21% Similarity=0.388 Sum_probs=59.3
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
.|+.+-++|+++..|+.++.+.++. +.|-.+.++......|+.+. .|+++.++.|+.|++|-++++-
T Consensus 226 ~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 226 CCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI 293 (1081)
T ss_pred hhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence 4788889999999999999999997 55777777777888999999 9999999999999999998863
No 225
>KOG4714|consensus
Probab=98.28 E-value=1e-06 Score=46.85 Aligned_cols=70 Identities=19% Similarity=0.378 Sum_probs=56.1
Q ss_pred eeEEEECCC-CCEEEEEeCCCeEEEEEccCCce-EEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSS-GSWIAIGQASGVLTLLDLRTGTS-LASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~ 71 (86)
|++++-+|. .+++++|..+|.+-+||.+.... ...+++|+.+++.+- +| ++..+++++.|+.+-.||..+
T Consensus 182 v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 182 VTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred chhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 455666774 46788999999999999987654 345678999999888 76 578899999999999999764
No 226
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.26 E-value=1.1e-05 Score=29.49 Aligned_cols=36 Identities=36% Similarity=0.556 Sum_probs=29.7
Q ss_pred eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEe
Q psy13945 33 SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 33 ~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~ 68 (86)
....+..+...+.++. .+.+..+++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3455566778889998 88888999999999999986
No 227
>KOG1188|consensus
Probab=98.20 E-value=2e-05 Score=43.43 Aligned_cols=74 Identities=16% Similarity=0.257 Sum_probs=55.1
Q ss_pred eeEEEECCCC-CEEEEEeCCCeEEEEEccCCce---EEEEeCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 2 IRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTS---LASWKGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
|+++.|+|.. +++++|+-||.+.++|+..... +...-.+...|.++. . +.-..+.+-.......+|+++.+.+.
T Consensus 168 VT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~ 247 (376)
T KOG1188|consen 168 VTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEE 247 (376)
T ss_pred ceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChh
Confidence 7899999965 6899999999999999875433 222233556677777 4 33446788889999999999877543
No 228
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.18 E-value=0.00013 Score=41.75 Aligned_cols=73 Identities=19% Similarity=0.129 Sum_probs=50.3
Q ss_pred eeEEEECCCCCEEEEEeC---CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCC--CEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQA---SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQ--TISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~--~i~~~~~~~~~~ 74 (86)
+....|+|||+.++..+. +..|++||+.+++.. .+....+.+.... +|++..++ +...++ .|.+||+.++..
T Consensus 204 v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~ 282 (435)
T PRK05137 204 VLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT 282 (435)
T ss_pred eEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce
Confidence 567899999998776543 468999999877653 3333445556667 89998765 555444 477778877654
Q ss_pred E
Q psy13945 75 K 75 (86)
Q Consensus 75 ~ 75 (86)
.
T Consensus 283 ~ 283 (435)
T PRK05137 283 T 283 (435)
T ss_pred E
Confidence 3
No 229
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.17 E-value=4.1e-05 Score=43.71 Aligned_cols=78 Identities=15% Similarity=0.148 Sum_probs=54.2
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC--CCCeEEEeecC
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHT--NDGSLKCNIQG 80 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 80 (86)
...|+|||+.++..+.+. +.+||+.+++........ ...... +|++..++.++.++...+|++ .++.....+..
T Consensus 337 ~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~ 413 (429)
T PRK01742 337 SAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPG 413 (429)
T ss_pred CccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccC
Confidence 356899999988777654 555898877654322221 223456 899999999888888887775 35777777776
Q ss_pred CCCC
Q psy13945 81 PTEP 84 (86)
Q Consensus 81 ~~~~ 84 (86)
|...
T Consensus 414 ~~g~ 417 (429)
T PRK01742 414 SDGQ 417 (429)
T ss_pred CCCC
Confidence 6554
No 230
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.15 E-value=0.00023 Score=41.29 Aligned_cols=75 Identities=17% Similarity=0.203 Sum_probs=61.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeC----CCCEEEEeCCCCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSL----DQTISAWHTNDGSLKC 76 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~----~~~i~~~~~~~~~~~~ 76 (86)
|.++..++||..++.+.+...+.+.|++++.+...-+...+-|.... +|++++++-+-- ...|+++|+..++...
T Consensus 404 I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~ 483 (668)
T COG4946 404 IEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYD 483 (668)
T ss_pred eEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEE
Confidence 67889999999999999999999999999988666555667888888 999999875433 3578999998776544
No 231
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.15 E-value=0.00011 Score=42.03 Aligned_cols=69 Identities=29% Similarity=0.354 Sum_probs=45.6
Q ss_pred eeEEEECCCCCEEEEEeCC---CeEEEEEccCCceE--EEEeCCccceEEEE-eCCCCeEEEE-eCCCCEEEE--eCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQAS---GVLTLLDLRTGTSL--ASWKGHEGEILQLV-TADDGTLISS-SLDQTISAW--HTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~--~~~~~~~~~v~~~~-~~~~~~~~~~-~~~~~i~~~--~~~~~ 72 (86)
+....|+|||+.++..+.+ ..|++||+.+++.. ..+.++ ..... +|++..++.. ..++...+| |..++
T Consensus 206 v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~ 282 (429)
T PRK01742 206 LMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGG 282 (429)
T ss_pred cccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEECCCC
Confidence 5678999999988766533 47999999876542 222232 33567 8999988765 456765555 65555
Q ss_pred e
Q psy13945 73 S 73 (86)
Q Consensus 73 ~ 73 (86)
.
T Consensus 283 ~ 283 (429)
T PRK01742 283 T 283 (429)
T ss_pred C
Confidence 4
No 232
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.10 E-value=1.5e-05 Score=29.09 Aligned_cols=27 Identities=26% Similarity=0.519 Sum_probs=24.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLD 27 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~ 27 (86)
+|.++.|.+++..+++++.++.+++|+
T Consensus 14 ~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 14 PVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred ceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 367899999889999999999999985
No 233
>KOG1587|consensus
Probab=98.09 E-value=3.1e-05 Score=45.56 Aligned_cols=70 Identities=16% Similarity=0.142 Sum_probs=53.2
Q ss_pred eeEEEECCCCC-EEEEEeCCCeEEEEEccC--CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGS-WIAIGQASGVLTLLDLRT--GTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
+++++|||-.. .|++++.+|.+.+||+.. ..+..+..........+. ++++..++.|...|.+.++++..
T Consensus 444 v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 444 VTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred eeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 78899999775 577888899999999863 333444443444445556 67799999999999999999854
No 234
>KOG1645|consensus
Probab=98.07 E-value=4.3e-05 Score=43.07 Aligned_cols=70 Identities=13% Similarity=0.233 Sum_probs=57.7
Q ss_pred eeEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
|..++|+|..+ ++..++.+..|.+.|+.+..+...+..+ ..+++.. .. +...+..|...+-|.++|+++-
T Consensus 196 IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 196 IRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred hhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCC
Confidence 56789999887 7889999999999999988887777766 6677776 54 4667788889999999999853
No 235
>KOG1517|consensus
Probab=98.06 E-value=6.7e-05 Score=46.97 Aligned_cols=80 Identities=10% Similarity=0.167 Sum_probs=55.7
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCCCC---eEEEee
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTNDG---SLKCNI 78 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~ 78 (86)
+.|.....++.++++...|++||.....+...+ .+....++++. . ..+..++.|..||.+++||.+.. ..+...
T Consensus 1171 ~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~ 1250 (1387)
T KOG1517|consen 1171 VDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVY 1250 (1387)
T ss_pred eehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceee
Confidence 455555555666666899999998866655443 33455677776 4 46799999999999999998743 245566
Q ss_pred cCCCCC
Q psy13945 79 QGPTEP 84 (86)
Q Consensus 79 ~~~~~~ 84 (86)
+.|++.
T Consensus 1251 R~h~~~ 1256 (1387)
T KOG1517|consen 1251 REHNDV 1256 (1387)
T ss_pred cccCCc
Confidence 666654
No 236
>KOG1517|consensus
Probab=98.05 E-value=7.4e-05 Score=46.79 Aligned_cols=62 Identities=26% Similarity=0.348 Sum_probs=48.9
Q ss_pred CCCEEEEEeCCCeEEEEEccCC---ceEEEEeCCccc--eEEEE-eCCCC-eEEEEeCCCCEEEEeCCC
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTG---TSLASWKGHEGE--ILQLV-TADDG-TLISSSLDQTISAWHTND 71 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~--v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~ 71 (86)
.|..+++|..||.+++||.+.. ..+...+.|+.. |..+. -+.|. .+++++.+|.|.+||++.
T Consensus 1220 ~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~ 1288 (1387)
T KOG1517|consen 1220 HGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRM 1288 (1387)
T ss_pred CCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEeccc
Confidence 4688999999999999997632 235666777765 77777 55444 599999999999999986
No 237
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.02 E-value=0.00031 Score=38.74 Aligned_cols=69 Identities=12% Similarity=0.172 Sum_probs=47.3
Q ss_pred eEEEECCCCCEEEEEeC-CCeEEEEEccC--Cc--eEEEEeCCc------cceEEEE-eCCCCeEEEEe-CCCCEEEEeC
Q psy13945 3 RCIAVSSSGSWIAIGQA-SGVLTLLDLRT--GT--SLASWKGHE------GEILQLV-TADDGTLISSS-LDQTISAWHT 69 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~~v~~~~~~~--~~--~~~~~~~~~------~~v~~~~-~~~~~~~~~~~-~~~~i~~~~~ 69 (86)
..+.|+||++++++... ++.+.+|++.. ++ ....+.... .....+. +|++..++.+. .++.|.+|++
T Consensus 178 ~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i 257 (330)
T PRK11028 178 RHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSV 257 (330)
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEE
Confidence 46899999999887766 89999999873 22 233332111 1122466 89998887765 4788999998
Q ss_pred CC
Q psy13945 70 ND 71 (86)
Q Consensus 70 ~~ 71 (86)
..
T Consensus 258 ~~ 259 (330)
T PRK11028 258 SE 259 (330)
T ss_pred eC
Confidence 54
No 238
>KOG2315|consensus
Probab=98.02 E-value=0.00022 Score=41.69 Aligned_cols=66 Identities=15% Similarity=0.307 Sum_probs=51.5
Q ss_pred eEEEECCCCCEEEEEeC---CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC------CCEEEEeCC
Q psy13945 3 RCIAVSSSGSWIAIGQA---SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLD------QTISAWHTN 70 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~------~~i~~~~~~ 70 (86)
+++-|+|.|++++.++- .|.+-+||..+.+.+..+.+.... -.. +|+|.+++++... +.+++|++.
T Consensus 315 N~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~tt--~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 315 NTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANTT--VFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred cceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCCce--EEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 46789999998876544 578999999998888888765443 335 8999999988754 677888874
No 239
>KOG4547|consensus
Probab=98.01 E-value=0.00011 Score=42.86 Aligned_cols=67 Identities=18% Similarity=0.405 Sum_probs=52.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC-----CCeEE-EEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD-----DGTLI-SSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-----~~~~~-~~~~~~~i~~~~~~ 70 (86)
+..++++||+..+++++ +.|++||+.+++....+.+|.++|.++. --. +..++ +......+.+|-..
T Consensus 147 ~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 147 VSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred cceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence 45788999999888774 7899999999999999999999999887 322 44454 44556677788654
No 240
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.98 E-value=0.00046 Score=39.64 Aligned_cols=76 Identities=16% Similarity=0.110 Sum_probs=49.1
Q ss_pred eeEEEECCCCCEEEEEe---CCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEE-eCCC--CEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQ---ASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISS-SLDQ--TISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~-~~~~--~i~~~~~~~~~~ 74 (86)
+...+|+|||+.++..+ ....+.++++.+++.... ........... +|++..++.. ..++ .|.+||+.++..
T Consensus 201 ~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~ 279 (429)
T PRK03629 201 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI 279 (429)
T ss_pred eeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCE
Confidence 56789999998877543 245788999887754322 22222334567 8999877643 3343 588899987765
Q ss_pred EEee
Q psy13945 75 KCNI 78 (86)
Q Consensus 75 ~~~~ 78 (86)
.+..
T Consensus 280 ~~lt 283 (429)
T PRK03629 280 RQVT 283 (429)
T ss_pred EEcc
Confidence 4433
No 241
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.97 E-value=0.00023 Score=39.22 Aligned_cols=66 Identities=12% Similarity=0.175 Sum_probs=45.0
Q ss_pred EEEECCCCCEEEEEeC-CCeEEEEEccCCce----EEEEeCCccceEEEE-eCCCCeEEEEe-CCCCEEEEeCC
Q psy13945 4 CIAVSSSGSWIAIGQA-SGVLTLLDLRTGTS----LASWKGHEGEILQLV-TADDGTLISSS-LDQTISAWHTN 70 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~----~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~~~i~~~~~~ 70 (86)
.+.++|++++++++.. +..+.+|++..... ...... ......+. +|++..++.+. .++.|.+|++.
T Consensus 232 ~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 232 DIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred eEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 4789999998888754 68899999864321 222211 12234567 89998887665 48899999874
No 242
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.94 E-value=0.0005 Score=39.45 Aligned_cols=67 Identities=24% Similarity=0.181 Sum_probs=45.0
Q ss_pred eeEEEECCCCCEEEEEeC---CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSGSWIAIGQA---SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~~i~~~~~ 69 (86)
+...+|+|||+.++..+. ...+.+||+.+++... +........... +|++..++ +...++...+|.+
T Consensus 198 v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 269 (427)
T PRK02889 198 IISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTV 269 (427)
T ss_pred cccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEE
Confidence 457899999988776543 2459999998776532 332334445667 89998775 5666776666643
No 243
>KOG4532|consensus
Probab=97.93 E-value=0.00053 Score=37.22 Aligned_cols=72 Identities=10% Similarity=0.057 Sum_probs=53.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccC-CceE-EEEeCC-ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRT-GTSL-ASWKGH-EGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~-~~~~~~-~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
..++.+++|+++.++.++...+..|.++. ++.+ ....+. ...-.+.. +.....++.+..|+++.+||++.-.
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~ 236 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMA 236 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccc
Confidence 45788999999999999999999998764 3333 323332 23345555 6778889999999999999998643
No 244
>KOG1275|consensus
Probab=97.93 E-value=6.2e-05 Score=46.36 Aligned_cols=66 Identities=15% Similarity=0.260 Sum_probs=53.6
Q ss_pred CCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEe---------CCCCEEEEeCCCCeE
Q psy13945 8 SSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSS---------LDQTISAWHTNDGSL 74 (86)
Q Consensus 8 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~ 74 (86)
..+++.+++|+..|+|.+.|..+-+.+.++.+|.+.+..+ .-.+..+++++ .|..+++||+|.-+.
T Consensus 184 R~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf-Dv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmra 258 (1118)
T KOG1275|consen 184 RYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF-DVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRA 258 (1118)
T ss_pred EecCcEEEeecccceEEeecCCcCceeeeeeccccceeee-eccCCeEEEeecccccccccccchhhhhhhhhhhc
Confidence 4567999999999999999999999999999999887766 34577777766 356889999976443
No 245
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.91 E-value=0.00047 Score=43.71 Aligned_cols=72 Identities=14% Similarity=0.102 Sum_probs=54.6
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe-C------------CccceEEEE-eCCCCeEEEEeCCCCEEEEe
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK-G------------HEGEILQLV-TADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~------------~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~ 68 (86)
.+++++++|.++++...++.|++||..++....... + .-.....+. .+++..+++-..++.|++||
T Consensus 807 ~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid 886 (1057)
T PLN02919 807 LGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLD 886 (1057)
T ss_pred ceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEE
Confidence 367889999988888889999999987766532211 1 112345677 88899888989999999999
Q ss_pred CCCCeE
Q psy13945 69 TNDGSL 74 (86)
Q Consensus 69 ~~~~~~ 74 (86)
+.++..
T Consensus 887 ~~~~~~ 892 (1057)
T PLN02919 887 LNKGEA 892 (1057)
T ss_pred CCCCcc
Confidence 988754
No 246
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.88 E-value=0.00017 Score=28.86 Aligned_cols=28 Identities=21% Similarity=0.459 Sum_probs=25.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEc
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDL 28 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~ 28 (86)
.|.+++|+|...+++.+..+|.|.++.+
T Consensus 13 ~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 13 RVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 3779999999999999999999999987
No 247
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.88 E-value=0.00037 Score=40.01 Aligned_cols=74 Identities=22% Similarity=0.109 Sum_probs=48.9
Q ss_pred eeEEEECCCCCEEEEEeC---CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCC--CEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQA---SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQ--TISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~--~i~~~~~~~~~~ 74 (86)
+....|+|||+.++..+. ...+++||+..++... +....+...... +|++..++ +.+.++ .|.+||+.++..
T Consensus 206 v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~ 284 (433)
T PRK04922 206 ILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL 284 (433)
T ss_pred cccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe
Confidence 456789999998776653 3469999988776532 222233344566 89988764 444443 689999887764
Q ss_pred EE
Q psy13945 75 KC 76 (86)
Q Consensus 75 ~~ 76 (86)
..
T Consensus 285 ~~ 286 (433)
T PRK04922 285 TR 286 (433)
T ss_pred EE
Confidence 43
No 248
>KOG1524|consensus
Probab=97.87 E-value=0.00012 Score=42.98 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=42.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI 56 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~ 56 (86)
+.+-.|+|||.-++++++||.+++|. ++|....++.....+|+|++ .|+...++
T Consensus 107 ~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl 161 (737)
T KOG1524|consen 107 ISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIV 161 (737)
T ss_pred hhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceE
Confidence 45668999999999999999999998 55665555555678899998 77655443
No 249
>KOG1832|consensus
Probab=97.87 E-value=3.6e-05 Score=47.58 Aligned_cols=78 Identities=21% Similarity=0.436 Sum_probs=63.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC-C-CEEEEeCCC-CeEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLD-Q-TISAWHTND-GSLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~-~-~i~~~~~~~-~~~~~~ 77 (86)
-+|++|+-+.+.++.|...|.+++++..+|.......+|+..++.+. +.++..+++.+.. . ...+|+... +.+.+.
T Consensus 1104 fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hs 1183 (1516)
T KOG1832|consen 1104 FTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHS 1183 (1516)
T ss_pred eeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccccCcccc
Confidence 36899999999999999999999999999999888999999999999 8888877765443 3 457898753 444444
Q ss_pred ec
Q psy13945 78 IQ 79 (86)
Q Consensus 78 ~~ 79 (86)
|.
T Consensus 1184 f~ 1185 (1516)
T KOG1832|consen 1184 FD 1185 (1516)
T ss_pred cc
Confidence 43
No 250
>KOG2079|consensus
Probab=97.86 E-value=0.00024 Score=44.54 Aligned_cols=63 Identities=19% Similarity=0.327 Sum_probs=49.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEE---E-eCCCCeEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQL---V-TADDGTLISSSLDQT 63 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~---~-~~~~~~~~~~~~~~~ 63 (86)
||++++|+.||..++.|-.+|.|.+||...++....+..+..+...+ . ...+..++++...|.
T Consensus 132 ~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 132 PVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred cceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence 68999999999999999999999999999888877776655544443 3 345556777776665
No 251
>KOG1240|consensus
Probab=97.86 E-value=0.00058 Score=43.59 Aligned_cols=80 Identities=23% Similarity=0.478 Sum_probs=61.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeC-CccceEEEE-eC---CCCeEEEEe--CCCCEEEEeCCCCe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKG-HEGEILQLV-TA---DDGTLISSS--LDQTISAWHTNDGS 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~-~~---~~~~~~~~~--~~~~i~~~~~~~~~ 73 (86)
.|++++.+|.++.++.|...|.+.+||++-+.++..+.- +..++..+. +| .....++++ ..+.+.+|++.+|.
T Consensus 1197 ~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~ 1276 (1431)
T KOG1240|consen 1197 LVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGL 1276 (1431)
T ss_pred ceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCc
Confidence 378999999999999999999999999998887776653 335566665 54 234555444 46789999999998
Q ss_pred EEEeecC
Q psy13945 74 LKCNIQG 80 (86)
Q Consensus 74 ~~~~~~~ 80 (86)
+..++..
T Consensus 1277 ~~~vl~~ 1283 (1431)
T KOG1240|consen 1277 RQTVLWA 1283 (1431)
T ss_pred ceEEEEc
Confidence 8777754
No 252
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.84 E-value=0.00091 Score=37.85 Aligned_cols=68 Identities=19% Similarity=0.227 Sum_probs=50.8
Q ss_pred CEE-EEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 12 SWI-AIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 12 ~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+++ ++-..++.+.+.|..+.+.+..+......-..+. +++++.++..+.|+.+.++|+.+.+.+..+.
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~ 75 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIK 75 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEe
Confidence 344 4666789999999999998888875433333455 7899998888899999999999988777664
No 253
>KOG1064|consensus
Probab=97.83 E-value=1.8e-05 Score=51.66 Aligned_cols=68 Identities=16% Similarity=0.302 Sum_probs=53.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
++++++.|.-+++++|+++|.+++||++-.+...++.. + . ....+++++..+.+++|++..-..+..+
T Consensus 2339 aT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~-------~-~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~ 2406 (2439)
T KOG1064|consen 2339 ATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-------L-D-TREYFVTGSSEGNIKIWRLSEFGLLHTF 2406 (2439)
T ss_pred ceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-------h-h-hhheeeccCcccceEEEEccccchhhcC
Confidence 57899999999999999999999999987666555544 1 2 4567889999999999998765544443
No 254
>KOG4640|consensus
Probab=97.77 E-value=0.00076 Score=40.23 Aligned_cols=74 Identities=19% Similarity=0.117 Sum_probs=59.1
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceE-EEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEIL-QLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~-~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
.-+.|+|.-.+|+.+..+|.+.+..+. ...+-++..++..+. ++. .|+|..++.|-.|++|++.|...+..+..
T Consensus 24 ~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 24 KRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS 99 (665)
T ss_pred EEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence 356789988999999999998887765 444445554566666 888 89999999999999999999998766654
No 255
>PRK03629 tolB translocation protein TolB; Provisional
Probab=97.76 E-value=0.0016 Score=37.54 Aligned_cols=79 Identities=19% Similarity=0.170 Sum_probs=49.2
Q ss_pred eEEEECCCCCEEEEEeCC---CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCC---EEEEeCCCCeEE
Q psy13945 3 RCIAVSSSGSWIAIGQAS---GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQT---ISAWHTNDGSLK 75 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~---i~~~~~~~~~~~ 75 (86)
....|+|||+.++..+.+ ..+.+||+.+++... +... ....... +|++..++..+.++. +.++++ ++...
T Consensus 334 ~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~-Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~ 410 (429)
T PRK03629 334 QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFK 410 (429)
T ss_pred cCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEE-eCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCe
Confidence 357899999988765433 358888987776432 2221 1223455 799999887776653 566676 45555
Q ss_pred EeecCCCCC
Q psy13945 76 CNIQGPTEP 84 (86)
Q Consensus 76 ~~~~~~~~~ 84 (86)
..+..|...
T Consensus 411 ~~l~~~~~~ 419 (429)
T PRK03629 411 ARLPATDGQ 419 (429)
T ss_pred EECccCCCC
Confidence 556555443
No 256
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.75 E-value=0.0018 Score=36.50 Aligned_cols=73 Identities=23% Similarity=0.237 Sum_probs=57.4
Q ss_pred EEECCCCCEEEEEe----------CCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCC-eEEEEe-CCCCEEEEeCCC
Q psy13945 5 IAVSSSGSWIAIGQ----------ASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDG-TLISSS-LDQTISAWHTND 71 (86)
Q Consensus 5 ~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~-~~~~i~~~~~~~ 71 (86)
++++++++.++... ...++.++|..+++.+..+.- ......+. ++++. .++... .++.+.+.|..+
T Consensus 253 ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t 331 (352)
T TIGR02658 253 VAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAET 331 (352)
T ss_pred EEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcC
Confidence 78899988777642 224799999999999887764 34677888 99988 776555 678899999999
Q ss_pred CeEEEee
Q psy13945 72 GSLKCNI 78 (86)
Q Consensus 72 ~~~~~~~ 78 (86)
++.+..+
T Consensus 332 ~k~i~~i 338 (352)
T TIGR02658 332 GKELSSV 338 (352)
T ss_pred CeEEeee
Confidence 9888877
No 257
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.74 E-value=0.0021 Score=36.87 Aligned_cols=73 Identities=22% Similarity=0.115 Sum_probs=47.0
Q ss_pred eeEEEECCCCCEEEEEeCC---CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCC--CEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQAS---GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQ--TISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~--~i~~~~~~~~~~ 74 (86)
+....|+|||+.++..+.+ ..|.++++.+++... +....+...... +|++..++ +...++ .|.++|+.++..
T Consensus 201 ~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~ 279 (430)
T PRK00178 201 ILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQL 279 (430)
T ss_pred eeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCe
Confidence 4677999999887654432 468889988776533 222233334566 89988775 444443 678889877654
Q ss_pred E
Q psy13945 75 K 75 (86)
Q Consensus 75 ~ 75 (86)
.
T Consensus 280 ~ 280 (430)
T PRK00178 280 S 280 (430)
T ss_pred E
Confidence 3
No 258
>KOG2321|consensus
Probab=97.73 E-value=0.00028 Score=41.69 Aligned_cols=75 Identities=16% Similarity=0.270 Sum_probs=58.8
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
++++.-..-++.++....|+-+++..|..+..+......++++. .+...++++|+.++.+..||.+....+..+.
T Consensus 139 m~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~ 214 (703)
T KOG2321|consen 139 MKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLD 214 (703)
T ss_pred ccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeee
Confidence 34444344456666677888888888888888887778899999 8999999999999999999999876665554
No 259
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.71 E-value=0.0024 Score=36.78 Aligned_cols=79 Identities=20% Similarity=0.344 Sum_probs=56.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccc-eEEEE-eCC-C---------------CeE--EEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGE-ILQLV-TAD-D---------------GTL--ISSSLD 61 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-v~~~~-~~~-~---------------~~~--~~~~~~ 61 (86)
+.++..+|++++.++.+.-|.|.++|+..+..+.-+++..+. +.-+. ... . ..+ +-...-
T Consensus 310 ~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyaprR 389 (415)
T PF14655_consen 310 GESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPRR 389 (415)
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEeccC
Confidence 467899999999999999999999999988887777775542 22222 111 1 122 234567
Q ss_pred CCEEEEeCCCCeEEEeecC
Q psy13945 62 QTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 62 ~~i~~~~~~~~~~~~~~~~ 80 (86)
+.|.+|.+++|..+..+.-
T Consensus 390 g~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 390 GILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred CeEEEEecCCCCEEEEEEe
Confidence 8899999999988877643
No 260
>KOG1064|consensus
Probab=97.69 E-value=4.8e-05 Score=49.85 Aligned_cols=41 Identities=17% Similarity=0.274 Sum_probs=35.3
Q ss_pred eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 38 KGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 38 ~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
.+|.+.+++++ .|..+.+++|+.+|.+++||+++.+.++.+
T Consensus 2333 ~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~ 2374 (2439)
T KOG1064|consen 2333 TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTF 2374 (2439)
T ss_pred eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHh
Confidence 66778889999 899999999999999999999887655544
No 261
>KOG2041|consensus
Probab=97.67 E-value=0.0004 Score=42.37 Aligned_cols=71 Identities=25% Similarity=0.504 Sum_probs=56.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCce---------------EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS---------------LASWKGHEGEILQLV-TADDGTLISSSLDQTIS 65 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~ 65 (86)
..|+.|+.+..+|++|+.+|.+++..+.+... -+++.+|+..|.-+- ..+.+.+.+...++.|.
T Consensus 17 L~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIi 96 (1189)
T KOG2041|consen 17 LHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLII 96 (1189)
T ss_pred EEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEE
Confidence 46899999999999999999999987643211 135678888888777 77788888999999999
Q ss_pred EEeCCCC
Q psy13945 66 AWHTNDG 72 (86)
Q Consensus 66 ~~~~~~~ 72 (86)
+|-+-.|
T Consensus 97 VWmlykg 103 (1189)
T KOG2041|consen 97 VWMLYKG 103 (1189)
T ss_pred EEeeecc
Confidence 9987444
No 262
>KOG1334|consensus
Probab=97.65 E-value=0.00023 Score=41.22 Aligned_cols=69 Identities=20% Similarity=0.312 Sum_probs=53.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEE-eC--CCCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLV-TA--DDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~--~~~~~~~~~~~~~i~~~~~~ 70 (86)
|..+.|...|..+++++++..+.+||...++....+ .+|...|.... .| +...+++.+.|+++++-.+.
T Consensus 145 VntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~ 217 (559)
T KOG1334|consen 145 VNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEIL 217 (559)
T ss_pred cceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeec
Confidence 567889999999999999999999999887776555 45666555444 33 46678899999999987664
No 263
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.64 E-value=0.003 Score=35.93 Aligned_cols=72 Identities=24% Similarity=0.142 Sum_probs=47.9
Q ss_pred eeEEEECCCCCEEEEEeCC---CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCC--CCEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQAS---GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLD--QTISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~--~~i~~~~~~~~~~ 74 (86)
+....|+|||+.++..... ..+++||+.+++.... ........... +|++..++ +...+ ..|.+|++.++..
T Consensus 192 ~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~ 270 (417)
T TIGR02800 192 ILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQL 270 (417)
T ss_pred eecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCE
Confidence 4567899999988765533 4799999887754332 22334455667 88988665 44433 4688888876643
No 264
>PRK04792 tolB translocation protein TolB; Provisional
Probab=97.62 E-value=0.0029 Score=36.73 Aligned_cols=73 Identities=18% Similarity=0.047 Sum_probs=45.4
Q ss_pred eeEEEECCCCCEEEEEeC-C--CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCC--CEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQA-S--GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQ--TISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~-~--~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~--~i~~~~~~~~~~ 74 (86)
+....|+|||+.++..+. + ..|+++|+.+++... +........... +|++..++ +...++ .|.++|+.+++.
T Consensus 220 ~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~ 298 (448)
T PRK04792 220 LMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL 298 (448)
T ss_pred ccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe
Confidence 456799999998775433 2 358888887766432 222222233556 89988775 445555 477778876654
Q ss_pred E
Q psy13945 75 K 75 (86)
Q Consensus 75 ~ 75 (86)
.
T Consensus 299 ~ 299 (448)
T PRK04792 299 T 299 (448)
T ss_pred E
Confidence 3
No 265
>KOG4497|consensus
Probab=97.61 E-value=0.0011 Score=36.98 Aligned_cols=72 Identities=15% Similarity=0.142 Sum_probs=53.3
Q ss_pred eeEEEECCCCCEEEEEeCC--CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQAS--GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
+.-++|++|..++++..+. ..+.+||++..+....+ .+..+|.... .|...-++.+.....+.+|......+
T Consensus 321 ~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL-iQk~piraf~WdP~~prL~vctg~srLY~W~psg~~~ 395 (447)
T KOG4497|consen 321 AGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL-IQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRV 395 (447)
T ss_pred cceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh-hhccceeEEEeCCCCceEEEEcCCceEEEEcCCCceE
Confidence 3468999999998876543 56899998876654433 3567888888 88888888777777899997754333
No 266
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.58 E-value=0.003 Score=34.41 Aligned_cols=39 Identities=15% Similarity=0.318 Sum_probs=32.6
Q ss_pred ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 41 EGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 41 ~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
...|..+. +|++..+++...+|.|.+|++-.-+..+.+.
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~ 268 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK 268 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence 45688889 9999999999999999999997766555543
No 267
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.57 E-value=0.0042 Score=35.90 Aligned_cols=75 Identities=16% Similarity=0.099 Sum_probs=48.6
Q ss_pred eEEEECCCCCEEEEEeCC---CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEE-EeC--CCCEEEEeCCCCeEE
Q psy13945 3 RCIAVSSSGSWIAIGQAS---GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLIS-SSL--DQTISAWHTNDGSLK 75 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~-~~~--~~~i~~~~~~~~~~~ 75 (86)
....|+|||+.++..... ..+.+||..+++...... ....+.... +|++..++- ... ...+.++++..++..
T Consensus 330 ~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~-~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~ 408 (428)
T PRK01029 330 SCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT-SPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTR 408 (428)
T ss_pred cceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC-CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 467899999987755432 468899988776643322 223445566 889887763 332 356888888777654
Q ss_pred Eee
Q psy13945 76 CNI 78 (86)
Q Consensus 76 ~~~ 78 (86)
...
T Consensus 409 ~Lt 411 (428)
T PRK01029 409 KIV 411 (428)
T ss_pred Eee
Confidence 443
No 268
>PRK02889 tolB translocation protein TolB; Provisional
Probab=97.45 E-value=0.0065 Score=35.05 Aligned_cols=73 Identities=12% Similarity=0.010 Sum_probs=43.4
Q ss_pred eEEEECCCCCEEEEEe-CCCeEEEEEc--cCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCC---CEEEEeCCCCeEE
Q psy13945 3 RCIAVSSSGSWIAIGQ-ASGVLTLLDL--RTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQ---TISAWHTNDGSLK 75 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~---~i~~~~~~~~~~~ 75 (86)
....|+|||+.++..+ ..+...+|.. ..++.. .+........... +|++..++..+.++ .|.+||+.++...
T Consensus 287 ~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~ 365 (427)
T PRK02889 287 TEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT 365 (427)
T ss_pred cCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE
Confidence 3568999999776544 3455555544 444332 2221222223456 89999887655433 6899998877644
Q ss_pred E
Q psy13945 76 C 76 (86)
Q Consensus 76 ~ 76 (86)
.
T Consensus 366 ~ 366 (427)
T PRK02889 366 A 366 (427)
T ss_pred E
Confidence 3
No 269
>KOG2315|consensus
Probab=97.45 E-value=0.0044 Score=36.63 Aligned_cols=77 Identities=17% Similarity=0.328 Sum_probs=54.3
Q ss_pred CeeEEEECCCCCEEE--EEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC---CCEEEEeCCCCeE
Q psy13945 1 LIRCIAVSSSGSWIA--IGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLD---QTISAWHTNDGSL 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~---~~i~~~~~~~~~~ 74 (86)
||.++.|+++++-++ -|-.--.+.++|++ +.++..+ ..++-..+. +|.++.++.++.+ |.+.+||..+.++
T Consensus 272 PVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~ 348 (566)
T KOG2315|consen 272 PVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKL 348 (566)
T ss_pred CceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhh
Confidence 689999999996544 46667788898865 3333322 233345666 8999999887754 6899999988776
Q ss_pred EEeecC
Q psy13945 75 KCNIQG 80 (86)
Q Consensus 75 ~~~~~~ 80 (86)
+..+..
T Consensus 349 i~~~~a 354 (566)
T KOG2315|consen 349 IAKFKA 354 (566)
T ss_pred cccccc
Confidence 665543
No 270
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.44 E-value=0.0061 Score=34.49 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=53.7
Q ss_pred ECCCCCEEEEEe----------CCCeEEEEEccCCceEEEEeCCcc-------ceEEEE-eCCCCeEEEEe-C-CCCEEE
Q psy13945 7 VSSSGSWIAIGQ----------ASGVLTLLDLRTGTSLASWKGHEG-------EILQLV-TADDGTLISSS-L-DQTISA 66 (86)
Q Consensus 7 ~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~-------~v~~~~-~~~~~~~~~~~-~-~~~i~~ 66 (86)
++||++.++.+. ++..|.+||..+.+....+..... .-..+. ++++.+++... . +..+.+
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V 132 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV 132 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence 899998766544 478999999999998877653222 112345 89999887665 3 688999
Q ss_pred EeCCCCeEEEeec
Q psy13945 67 WHTNDGSLKCNIQ 79 (86)
Q Consensus 67 ~~~~~~~~~~~~~ 79 (86)
.|+.+++.+..+.
T Consensus 133 vD~~~~kvv~ei~ 145 (352)
T TIGR02658 133 VDLEGKAFVRMMD 145 (352)
T ss_pred EECCCCcEEEEEe
Confidence 9999988777653
No 271
>PRK01029 tolB translocation protein TolB; Provisional
Probab=97.40 E-value=0.006 Score=35.29 Aligned_cols=74 Identities=12% Similarity=0.082 Sum_probs=45.0
Q ss_pred eEEEECCCCCEEEEEe-CCCeEEEE--EccC-CceEEEEeCCccceEEEE-eCCCCeEEEEeCC---CCEEEEeCCCCeE
Q psy13945 3 RCIAVSSSGSWIAIGQ-ASGVLTLL--DLRT-GTSLASWKGHEGEILQLV-TADDGTLISSSLD---QTISAWHTNDGSL 74 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~-~~~~v~~~--~~~~-~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~---~~i~~~~~~~~~~ 74 (86)
...+|+|||+.|+..+ .++...+| ++.. +.....+......+.... +|++..++....+ ..|.+||+.+++.
T Consensus 284 ~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~ 363 (428)
T PRK01029 284 GNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD 363 (428)
T ss_pred CCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe
Confidence 3578999998766544 45544444 4432 222333433334555667 8999988754432 4688999887765
Q ss_pred EE
Q psy13945 75 KC 76 (86)
Q Consensus 75 ~~ 76 (86)
..
T Consensus 364 ~~ 365 (428)
T PRK01029 364 YQ 365 (428)
T ss_pred EE
Confidence 43
No 272
>KOG4649|consensus
Probab=97.40 E-value=0.005 Score=33.63 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=50.2
Q ss_pred CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE--eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV--TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|.+++.|.-.+.+++.+.++++..-.+..- +.|.+-+ .+++..+.+++.|+.....|+++..++...+
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~-~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVIL-ETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeeh-hhhccceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence 455777777888888888888665555542 2222222 6889999999999999999999888877654
No 273
>KOG4532|consensus
Probab=97.38 E-value=0.0063 Score=33.31 Aligned_cols=75 Identities=15% Similarity=0.043 Sum_probs=52.9
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceE-----EEEeCCccceEEEE-eCCCC--eEEEEeCCCCEEEEeCCCCeEE
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSL-----ASWKGHEGEILQLV-TADDG--TLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----~~~~~~~~~v~~~~-~~~~~--~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+..|+.....++++..|+++.+||++..... ..-..|++.+.... ++.+. +++-.-.-+.+.+.|++++...
T Consensus 208 ~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~ 287 (344)
T KOG4532|consen 208 YNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNH 287 (344)
T ss_pred eeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCcee
Confidence 5678888889999999999999999854332 12223677888777 76544 3344445567899999988655
Q ss_pred Eee
Q psy13945 76 CNI 78 (86)
Q Consensus 76 ~~~ 78 (86)
+.+
T Consensus 288 q~I 290 (344)
T KOG4532|consen 288 QVI 290 (344)
T ss_pred eEE
Confidence 544
No 274
>KOG1409|consensus
Probab=97.37 E-value=0.0059 Score=34.37 Aligned_cols=72 Identities=25% Similarity=0.475 Sum_probs=50.6
Q ss_pred EEEEeCCCeEEEEEcc--CCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe-EEEeecCCCCCC
Q psy13945 14 IAIGQASGVLTLLDLR--TGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS-LKCNIQGPTEPV 85 (86)
Q Consensus 14 ~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v 85 (86)
.+.|...+.+.+..+. .-..+.++.+|...+.++. .+....+.++..|..+.+||+--.+ ....+.+|.+.|
T Consensus 168 ~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV 243 (404)
T KOG1409|consen 168 AFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKV 243 (404)
T ss_pred EEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhh
Confidence 3345555555544432 2344677888999999999 8889999999999999999986433 345566676554
No 275
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.37 E-value=0.00082 Score=36.45 Aligned_cols=39 Identities=31% Similarity=0.394 Sum_probs=33.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH 40 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 40 (86)
|..+..+|||.++++...+|.|.+|++..-.....+.-+
T Consensus 232 i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~ 270 (282)
T PF15492_consen 232 IFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQD 270 (282)
T ss_pred eEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchh
Confidence 567899999999999999999999999877766666543
No 276
>PRK05137 tolB translocation protein TolB; Provisional
Probab=97.37 E-value=0.0084 Score=34.63 Aligned_cols=71 Identities=14% Similarity=0.143 Sum_probs=45.0
Q ss_pred eEEEECCCCCEEE-EEeCCC--eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeC-C--CCEEEEeCCCCeE
Q psy13945 3 RCIAVSSSGSWIA-IGQASG--VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSL-D--QTISAWHTNDGSL 74 (86)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~-~--~~i~~~~~~~~~~ 74 (86)
...+|+|||+.++ +.+.++ .|+++|+.+++. ..+..+........ +|++..++..+. + ..|.+++...+..
T Consensus 249 ~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~ 326 (435)
T PRK05137 249 FAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP 326 (435)
T ss_pred cCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe
Confidence 4578999998765 445444 477778776654 33443444445566 889888765442 2 3677888765543
No 277
>KOG1354|consensus
Probab=97.36 E-value=0.0042 Score=34.99 Aligned_cols=70 Identities=20% Similarity=0.340 Sum_probs=49.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEcc-CCceEEEEeCCcc------------ceE---EEE-eCCCCeEEEEeCCCCE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLR-TGTSLASWKGHEG------------EIL---QLV-TADDGTLISSSLDQTI 64 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~------------~v~---~~~-~~~~~~~~~~~~~~~i 64 (86)
|..+.|+.+|+++.+.+ --+|++||+. ..++..+...|.. .|. ... +.+...+++|+....+
T Consensus 275 ISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~f 353 (433)
T KOG1354|consen 275 ISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVF 353 (433)
T ss_pred hhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceE
Confidence 67899999999998764 5689999983 4444444443321 121 223 4566689999999999
Q ss_pred EEEeCCCC
Q psy13945 65 SAWHTNDG 72 (86)
Q Consensus 65 ~~~~~~~~ 72 (86)
++++...|
T Consensus 354 rvf~~~~g 361 (433)
T KOG1354|consen 354 RVFNLARG 361 (433)
T ss_pred EEecCCCC
Confidence 99996544
No 278
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.35 E-value=0.016 Score=37.33 Aligned_cols=74 Identities=20% Similarity=0.225 Sum_probs=50.8
Q ss_pred eEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeC-------------C--------ccceEEEE-eCCCCeEEEEe
Q psy13945 3 RCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKG-------------H--------EGEILQLV-TADDGTLISSS 59 (86)
Q Consensus 3 ~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~-------------~--------~~~v~~~~-~~~~~~~~~~~ 59 (86)
..++++|++. ++++...++.|++||..++.......+ . -..-..+. .+++..+++-.
T Consensus 743 ~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs 822 (1057)
T PLN02919 743 SGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADS 822 (1057)
T ss_pred cEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEEC
Confidence 4688999987 556666678999999876543211100 0 00123566 78888888999
Q ss_pred CCCCEEEEeCCCCeEEE
Q psy13945 60 LDQTISAWHTNDGSLKC 76 (86)
Q Consensus 60 ~~~~i~~~~~~~~~~~~ 76 (86)
.++.|++||..++....
T Consensus 823 ~N~rIrviD~~tg~v~t 839 (1057)
T PLN02919 823 YNHKIKKLDPATKRVTT 839 (1057)
T ss_pred CCCEEEEEECCCCeEEE
Confidence 99999999998776553
No 279
>KOG4497|consensus
Probab=97.35 E-value=0.006 Score=34.30 Aligned_cols=71 Identities=13% Similarity=0.199 Sum_probs=50.8
Q ss_pred EEEECCCCCEEE-EEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeE-EEEeCCCCEEEEeCCCCeE
Q psy13945 4 CIAVSSSGSWIA-IGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTL-ISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~ 74 (86)
-+.|..|..+++ ....++.+.+|++...+--.........+.++. +|+++.+ .+...+-.|.+|.+.+.++
T Consensus 53 yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~ 126 (447)
T KOG4497|consen 53 YIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKG 126 (447)
T ss_pred heeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEecccee
Confidence 355666665544 455577899999876555556665566788888 9999665 5677899999999876543
No 280
>PRK04922 tolB translocation protein TolB; Provisional
Probab=97.31 E-value=0.01 Score=34.28 Aligned_cols=72 Identities=11% Similarity=0.057 Sum_probs=44.5
Q ss_pred eEEEECCCCCEEEEEe-CCCe--EEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC---CCEEEEeCCCCeEE
Q psy13945 3 RCIAVSSSGSWIAIGQ-ASGV--LTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLD---QTISAWHTNDGSLK 75 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~-~~~~--v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~---~~i~~~~~~~~~~~ 75 (86)
...+|+|||+.++..+ ..+. ++++++..++... +........... +|++..++....+ ..|.+|++.++...
T Consensus 295 ~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~ 373 (433)
T PRK04922 295 TEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR 373 (433)
T ss_pred cceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE
Confidence 3578999999877655 3444 6666766555322 222222233566 8999888654332 36889998777654
No 281
>KOG2139|consensus
Probab=97.29 E-value=0.006 Score=34.61 Aligned_cols=64 Identities=13% Similarity=0.153 Sum_probs=43.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCCCEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQTIS 65 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~~i~ 65 (86)
++-+.|+||+..++++..|...++|+........++.-..+.|.... +|+|..++ +.+....+.
T Consensus 241 ~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~ly 306 (445)
T KOG2139|consen 241 FSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPRLY 306 (445)
T ss_pred eeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCceEE
Confidence 34689999999999999999999996443333333333344677767 78877664 444444443
No 282
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=97.20 E-value=0.012 Score=33.31 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=45.7
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccce-EEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCC
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEI-LQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQGPT 82 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 82 (86)
++..++.++.++.+..+|..+++.+-......... .+. ...+..++.++.++.+.++|..+++.+..+.-+.
T Consensus 278 ~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp-~i~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~ 350 (377)
T TIGR03300 278 DDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAP-AVVGGYLVVGDFEGYLHWLSREDGSFVARLKTDG 350 (377)
T ss_pred eCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccC-EEECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC
Confidence 34556666777888888877776543321111111 111 1235677788899999999999999887776443
No 283
>KOG2314|consensus
Probab=97.12 E-value=0.0036 Score=37.24 Aligned_cols=74 Identities=16% Similarity=0.282 Sum_probs=50.8
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeC-----------CCCEEEEeCC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSL-----------DQTISAWHTN 70 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~-----------~~~i~~~~~~ 70 (86)
+-+.|||.|.++++-...| |.+|--..-..+.++. | ..|..+. +|+...+++-+. ...+++||++
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~ 290 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA 290 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-C-CCceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence 4578999999999876554 5566543333333433 2 3466778 899999988652 2579999999
Q ss_pred CCeEEEeec
Q psy13945 71 DGSLKCNIQ 79 (86)
Q Consensus 71 ~~~~~~~~~ 79 (86)
+|.....|.
T Consensus 291 tG~lkrsF~ 299 (698)
T KOG2314|consen 291 TGLLKRSFP 299 (698)
T ss_pred ccchhccee
Confidence 997666554
No 284
>KOG2079|consensus
Probab=97.11 E-value=0.002 Score=40.83 Aligned_cols=74 Identities=19% Similarity=0.285 Sum_probs=51.6
Q ss_pred CCEEEEEeCCCeEEEEEccCC-ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCCCC
Q psy13945 11 GSWIAIGQASGVLTLLDLRTG-TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQGPTEP 84 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 84 (86)
+..++.++..|.+...|.... .....-..-+++|.+++ +.++..++.|-.+|.|.+||...++.++.+..|..+
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap 174 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAP 174 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCc
Confidence 345667777777776664321 11111122357899999 888999999999999999999998888877655443
No 285
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=97.11 E-value=0.017 Score=32.95 Aligned_cols=70 Identities=16% Similarity=0.137 Sum_probs=45.2
Q ss_pred EEEECCCCCEEEEEeC-CC--eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCC---CEEEEeCCCCeE
Q psy13945 4 CIAVSSSGSWIAIGQA-SG--VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQ---TISAWHTNDGSL 74 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~---~i~~~~~~~~~~ 74 (86)
...|++|++.++..+. .+ .+++++...++. ..+........... +|++..++....+. .|.++++.++..
T Consensus 282 ~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~ 358 (417)
T TIGR02800 282 EPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE 358 (417)
T ss_pred CEEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe
Confidence 4678999987765443 33 577778766554 33333334445566 88888887666554 678888876543
No 286
>KOG4190|consensus
Probab=97.06 E-value=0.00045 Score=41.04 Aligned_cols=53 Identities=25% Similarity=0.557 Sum_probs=42.9
Q ss_pred EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC-------CeEEEeecCCCCCCC
Q psy13945 34 LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND-------GSLKCNIQGPTEPVH 86 (86)
Q Consensus 34 ~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~v~ 86 (86)
+..+.+|+.+|..+. -.+..-+++++.|.++++|.++. ..|.+++..|..+|+
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~ 788 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIH 788 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCccc
Confidence 456678888888888 67788899999999999998863 358888888887664
No 287
>PRK00178 tolB translocation protein TolB; Provisional
Probab=97.04 E-value=0.022 Score=32.87 Aligned_cols=70 Identities=23% Similarity=0.175 Sum_probs=43.7
Q ss_pred EEEECCCCCEEE-EEeCCC--eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEe-CC--CCEEEEeCCCCeE
Q psy13945 4 CIAVSSSGSWIA-IGQASG--VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSS-LD--QTISAWHTNDGSL 74 (86)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~--~~i~~~~~~~~~~ 74 (86)
...|+|||+.++ +...++ .|+++|..+++.. .+..+........ +|++..++..+ .+ ..|..+++.+++.
T Consensus 247 ~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~ 323 (430)
T PRK00178 247 APAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA 323 (430)
T ss_pred CeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 578999998776 444444 6888898876643 3333333444556 78888765443 33 3577777766653
No 288
>KOG4640|consensus
Probab=97.03 E-value=0.0026 Score=38.13 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=29.7
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEE
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLAS 36 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 36 (86)
.+++|.|||++++.|-.||+|++.|..++..+..
T Consensus 66 ~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 66 ASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS 99 (665)
T ss_pred eeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence 3899999999999999999999999987765443
No 289
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.03 E-value=0.0061 Score=37.87 Aligned_cols=61 Identities=23% Similarity=0.393 Sum_probs=43.0
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEE-EeCCccceEEEE-eCCCCeEEEEeCCCCEEE
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLAS-WKGHEGEILQLV-TADDGTLISSSLDQTISA 66 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~ 66 (86)
|++-..+ -+|+.|+.+|.|++||. .++...+ +.+-..+|..+. +.+|.+++..+....+.+
T Consensus 582 ~~aTt~~-G~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi 644 (794)
T PF08553_consen 582 CFATTED-GYIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLI 644 (794)
T ss_pred EEEecCC-ceEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEE
Confidence 4444443 45788999999999994 4443433 345678999999 999999877665554443
No 290
>KOG0309|consensus
Probab=97.02 E-value=0.00087 Score=41.05 Aligned_cols=70 Identities=23% Similarity=0.305 Sum_probs=54.7
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCC-ceEEEEeCCccceEEEE--eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTG-TSLASWKGHEGEILQLV--TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+.++|+.....+.+.+...-+++||.+.+ .++..+++|...+..++ ......+.+.+.|+++..|++...
T Consensus 162 sqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS 234 (1081)
T KOG0309|consen 162 SQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS 234 (1081)
T ss_pred ceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence 46788887777777777889999998865 45677788877777777 345667789999999999998643
No 291
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.88 E-value=0.0064 Score=24.28 Aligned_cols=32 Identities=3% Similarity=0.021 Sum_probs=27.3
Q ss_pred ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 41 EGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 41 ~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
...|.++. +|...+++.+..++.|.++.+ +++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence 34688888 999999999999999999998 444
No 292
>KOG3914|consensus
Probab=96.85 E-value=0.0059 Score=34.69 Aligned_cols=50 Identities=20% Similarity=0.228 Sum_probs=36.1
Q ss_pred EEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee-cCCCCC
Q psy13945 35 ASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI-QGPTEP 84 (86)
Q Consensus 35 ~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~ 84 (86)
....+|-..+..++ +||.+.++++..|..|++-.+..-..+..| -||+.-
T Consensus 145 ~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eF 196 (390)
T KOG3914|consen 145 EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEF 196 (390)
T ss_pred chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhh
Confidence 34457778888999 999999999999999998876543333332 345543
No 293
>KOG1354|consensus
Probab=96.84 E-value=0.025 Score=32.10 Aligned_cols=70 Identities=20% Similarity=0.369 Sum_probs=49.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccC-Cc----eEEEEeCCc------------cceEEEE-eC--CCCeEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRT-GT----SLASWKGHE------------GEILQLV-TA--DDGTLISSSLD 61 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~----~~~~~~~~~------------~~v~~~~-~~--~~~~~~~~~~~ 61 (86)
|.++.|..+|.++++|+.+|.+.++.... .+ ....++.|. .+|..+. .+ +...++....|
T Consensus 28 is~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNd 107 (433)
T KOG1354|consen 28 ISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTND 107 (433)
T ss_pred eeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCC
Confidence 67899999999999999999999986432 22 222333332 2455566 43 45678888999
Q ss_pred CCEEEEeCCC
Q psy13945 62 QTISAWHTND 71 (86)
Q Consensus 62 ~~i~~~~~~~ 71 (86)
.++++|-++.
T Consensus 108 ktiKlWKi~e 117 (433)
T KOG1354|consen 108 KTIKLWKIRE 117 (433)
T ss_pred cceeeeeeec
Confidence 9999998754
No 294
>KOG4190|consensus
Probab=96.81 E-value=0.0011 Score=39.48 Aligned_cols=75 Identities=35% Similarity=0.668 Sum_probs=57.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEE-EeCCCCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISA-WHTNDGSLKC 76 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~ 76 (86)
+.+++..+.|+.++.+-..|.+.+.|.++++++..++...-....++.|..+.++....|+.+.+ |...++....
T Consensus 879 ~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldgimh~ 954 (1034)
T KOG4190|consen 879 TRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDGIMHL 954 (1034)
T ss_pred eeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCCeeee
Confidence 56888889999999999999999999999999888876554444444567777777888888887 8766554433
No 295
>KOG1275|consensus
Probab=96.70 E-value=0.036 Score=35.23 Aligned_cols=75 Identities=12% Similarity=0.096 Sum_probs=56.8
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCCCCC
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQGPTEPV 85 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 85 (86)
++..++.|+....+..+|+.+.+......-....+.-+ ..+++.+.+|...|+|.+-|.++.+.++++.+|++.|
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~im-R~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~si 220 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIM-RYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSI 220 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEE-EecCcEEEeecccceEEeecCCcCceeeeeeccccce
Confidence 34556777777778888888777655544333334333 5678899999999999999999999999999998765
No 296
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=96.69 E-value=0.023 Score=29.85 Aligned_cols=68 Identities=22% Similarity=0.299 Sum_probs=46.0
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
++..+++++.++.+..+|..+++..-....... +.......+..++.+..++.+..+|..+|+.+...
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~ 102 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGP-ISGAPVVDGGRVYVGTSDGSLYALDAKTGKVLWSI 102 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSC-GGSGEEEETTEEEEEETTSEEEEEETTTSCEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeecccc-ccceeeecccccccccceeeeEecccCCcceeeee
Confidence 456677778899999999999988655553221 11101123445555557779999999999988774
No 297
>KOG3617|consensus
Probab=96.65 E-value=0.003 Score=39.57 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=56.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
+++++|+|..-.++.|=.-|.+.+|...+.+.......|.-.+..+. +++|..++++..-+.+.+|.+.
T Consensus 62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 35788999877788888888899998766655444456888899999 9999999999999999999775
No 298
>KOG1912|consensus
Probab=96.58 E-value=0.015 Score=36.25 Aligned_cols=80 Identities=18% Similarity=0.173 Sum_probs=56.5
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC------------CCeEEEEeCCCCEEEEeCC
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD------------DGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~------------~~~~~~~~~~~~i~~~~~~ 70 (86)
++.|++.| +|+-|+ ...+.+.|..+.+.+..+.-|+..|..+. .|. ...++++...|.|.+||..
T Consensus 20 A~Dw~~~G-LiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~ 97 (1062)
T KOG1912|consen 20 AADWSPSG-LIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFV 97 (1062)
T ss_pred ccccCccc-eEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEeh
Confidence 45666644 455554 55788889888888888888888888876 431 2235677788999999998
Q ss_pred CCeEEEeecCCCCCC
Q psy13945 71 DGSLKCNIQGPTEPV 85 (86)
Q Consensus 71 ~~~~~~~~~~~~~~v 85 (86)
.+..+..+..|.+.+
T Consensus 98 ~~s~~~~l~~~~~~~ 112 (1062)
T KOG1912|consen 98 LASVINWLSHSNDSV 112 (1062)
T ss_pred hhhhhhhhcCCCcch
Confidence 877776666665543
No 299
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=96.56 E-value=0.026 Score=33.45 Aligned_cols=78 Identities=12% Similarity=0.238 Sum_probs=53.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeC---------------CCCE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSL---------------DQTI 64 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~---------------~~~i 64 (86)
|+..+++||.|.+++... ..-|.+|.-.....+..+.. ..|..+. +|.+..+.+=.. +..+
T Consensus 34 p~~~~~~SP~G~~l~~~~-~~~V~~~~g~~~~~l~~~~~--~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~ 110 (561)
T COG5354 34 PVAYVSESPLGTYLFSEH-AAGVECWGGPSKAKLVRFRH--PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNV 110 (561)
T ss_pred chhheeecCcchheehhh-ccceEEccccchhheeeeec--CCceecccCcccceeeeeccCCccChhhccCCccccCce
Confidence 456788999999988765 34577777665554444442 3456666 787777776432 3369
Q ss_pred EEEeCCCCeEEEeecCC
Q psy13945 65 SAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 65 ~~~~~~~~~~~~~~~~~ 81 (86)
.+||+.++..+..+.+.
T Consensus 111 ~vwd~~sg~iv~sf~~~ 127 (561)
T COG5354 111 FVWDIASGMIVFSFNGI 127 (561)
T ss_pred eEEeccCceeEeecccc
Confidence 99999999988877653
No 300
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.43 E-value=0.015 Score=22.81 Aligned_cols=30 Identities=23% Similarity=0.479 Sum_probs=24.7
Q ss_pred CeeEEEECCCC---CEEEEEeCCCeEEEEEccC
Q psy13945 1 LIRCIAVSSSG---SWIAIGQASGVLTLLDLRT 30 (86)
Q Consensus 1 ~i~~~~~~~~~---~~~~~~~~~~~v~~~~~~~ 30 (86)
++.++.|+|+. .+++.+-..+.+.++|++.
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 57899999855 4888888889999999874
No 301
>KOG4714|consensus
Probab=96.41 E-value=0.0019 Score=34.98 Aligned_cols=43 Identities=7% Similarity=0.205 Sum_probs=29.5
Q ss_pred cceEEEE-eCCCC-eEEEEeCCCCEEEEeCCCCeEE-EeecCCCCC
Q psy13945 42 GEILQLV-TADDG-TLISSSLDQTISAWHTNDGSLK-CNIQGPTEP 84 (86)
Q Consensus 42 ~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~ 84 (86)
..|.++. +|..+ .+++|+.++.+.+||.++.... ..+..|...
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~ 225 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAE 225 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhh
Confidence 3478888 88655 5567888999999999886433 344555443
No 302
>PRK04792 tolB translocation protein TolB; Provisional
Probab=96.41 E-value=0.08 Score=31.01 Aligned_cols=71 Identities=18% Similarity=0.174 Sum_probs=43.4
Q ss_pred EEEECCCCCEEEE-EeCCCe--EEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEe-CC--CCEEEEeCCCCeEE
Q psy13945 4 CIAVSSSGSWIAI-GQASGV--LTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSS-LD--QTISAWHTNDGSLK 75 (86)
Q Consensus 4 ~~~~~~~~~~~~~-~~~~~~--v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~--~~i~~~~~~~~~~~ 75 (86)
...|+|||+.++. .+.++. |+++|+.+++.. .+..+........ +|++..++..+ .+ ..+.+++..+++..
T Consensus 266 ~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~ 343 (448)
T PRK04792 266 APRFSPDGKKLALVLSKDGQPEIYVVDIATKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVS 343 (448)
T ss_pred CeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 5689999987654 455554 777787766543 3333333345566 78888775443 33 35666677666543
No 303
>KOG0309|consensus
Probab=96.39 E-value=0.027 Score=35.08 Aligned_cols=84 Identities=19% Similarity=0.283 Sum_probs=55.5
Q ss_pred eeEEEECCCCC-EEEEEeCCCeEEEEEccCC-ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC-eEEEe
Q psy13945 2 IRCIAVSSSGS-WIAIGQASGVLTLLDLRTG-TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG-SLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~ 77 (86)
|+.+-|++..+ .+++.+-+..+..||.+.. .....+..-...-..+. ......++..+....+++||.+.| .++..
T Consensus 117 itd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s 196 (1081)
T KOG0309|consen 117 ITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCS 196 (1081)
T ss_pred eeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEE
Confidence 56667777654 4667777888999998643 33444443233334555 555555566677888999999865 67788
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
+++|...|
T Consensus 197 ~K~~vs~v 204 (1081)
T KOG0309|consen 197 LKGHVSSV 204 (1081)
T ss_pred ecccceee
Confidence 88876654
No 304
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=96.21 E-value=0.12 Score=30.97 Aligned_cols=29 Identities=31% Similarity=0.500 Sum_probs=25.2
Q ss_pred CCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 51 DDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 51 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+...+++.+.|+++++||+.++.++....
T Consensus 229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 229 DDTFLFTLSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp TTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 66788899999999999999999977653
No 305
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.13 E-value=0.05 Score=25.86 Aligned_cols=64 Identities=9% Similarity=0.215 Sum_probs=39.3
Q ss_pred eeEEEECC---CC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEe
Q psy13945 2 IRCIAVSS---SG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 2 i~~~~~~~---~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~ 68 (86)
|+++++.. || .-++.|++|..|++|+-. +.+..+. ....+.++.......++-+..+++|-+++
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~-e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEIT-ETDKVTSLCSLGGGRFAYALANGTVGVYD 69 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEe-cccceEEEEEcCCCEEEEEecCCEEEEEe
Confidence 45566544 44 568999999999999743 3333333 24566666633335566666666655544
No 306
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=96.12 E-value=0.083 Score=29.96 Aligned_cols=58 Identities=21% Similarity=0.310 Sum_probs=39.2
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEE
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAW 67 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~ 67 (86)
.+..++.++.++.+.++|..+++.+..+..+...+..--...+..++.++.|+.|..+
T Consensus 319 ~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 319 VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQTRDGDLYAF 376 (377)
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEEeCCceEEEe
Confidence 3567788889999999999999988777654433222111123457778888887664
No 307
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.06 E-value=0.11 Score=29.28 Aligned_cols=74 Identities=22% Similarity=0.312 Sum_probs=47.7
Q ss_pred eeEEEECCCCCEEEEEe-CCCeEEEEEcc--CCce--EEEEeCCccceEEEE-eCCCCeEEEEe-CCCCEEEEeC--CCC
Q psy13945 2 IRCIAVSSSGSWIAIGQ-ASGVLTLLDLR--TGTS--LASWKGHEGEILQLV-TADDGTLISSS-LDQTISAWHT--NDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~-~~~~v~~~~~~--~~~~--~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~~~i~~~~~--~~~ 72 (86)
...+.++|||++++.+. ....|.++++. +++. +.........-..+. +|++.+++.+. .++.|.+|++ .+|
T Consensus 247 ~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG 326 (345)
T PF10282_consen 247 PAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTG 326 (345)
T ss_dssp EEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred ceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCC
Confidence 35789999999877655 45679999983 3443 233332233356777 89999887666 5668888865 466
Q ss_pred eEE
Q psy13945 73 SLK 75 (86)
Q Consensus 73 ~~~ 75 (86)
...
T Consensus 327 ~l~ 329 (345)
T PF10282_consen 327 KLT 329 (345)
T ss_dssp EEE
T ss_pred cEE
Confidence 543
No 308
>KOG2314|consensus
Probab=96.00 E-value=0.087 Score=31.86 Aligned_cols=60 Identities=12% Similarity=0.107 Sum_probs=39.5
Q ss_pred eEEEECCCCCEEEEEe---CCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCC
Q psy13945 3 RCIAVSSSGSWIAIGQ---ASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQ 62 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~ 62 (86)
+.+-|+|.|+.++.+. ..+.+.++|.........-.......+.+. .|.|+.+++++...
T Consensus 496 N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~w 559 (698)
T KOG2314|consen 496 NTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSW 559 (698)
T ss_pred ceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccccccceECCCCCEEEEeeehh
Confidence 5788999999877644 467899999774232222122222334566 79999999887544
No 309
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.98 E-value=0.14 Score=32.94 Aligned_cols=69 Identities=14% Similarity=0.196 Sum_probs=44.0
Q ss_pred eEEEECCCCCEEEEEeC------CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeC---CCCEEEEeCCCC
Q psy13945 3 RCIAVSSSGSWIAIGQA------SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSL---DQTISAWHTNDG 72 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~---~~~i~~~~~~~~ 72 (86)
..++|..||.++++.+- ...++||+.. |+...+-..-.+--..++ .|+|.++++.-. ...|.+|. ++|
T Consensus 213 ~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNG 290 (928)
T PF04762_consen 213 VRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNG 290 (928)
T ss_pred eEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCC
Confidence 36889999999987664 3578999844 655444333333334567 799999887653 34555565 344
Q ss_pred e
Q psy13945 73 S 73 (86)
Q Consensus 73 ~ 73 (86)
.
T Consensus 291 L 291 (928)
T PF04762_consen 291 L 291 (928)
T ss_pred c
Confidence 3
No 310
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=95.91 E-value=0.17 Score=30.22 Aligned_cols=69 Identities=14% Similarity=0.188 Sum_probs=53.5
Q ss_pred EEECCCCCEEEEEeCCC-eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 5 IAVSSSGSWIAIGQASG-VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
..+..+++-++.|..|+ .+-++|..+++. .+....-+.|.++. ++++..++.+.....+.+.|+.++..
T Consensus 365 ~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv 435 (668)
T COG4946 365 RRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV 435 (668)
T ss_pred EEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe
Confidence 34455666778888888 888999776653 55556678889999 99999999998888888889887753
No 311
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.86 E-value=0.14 Score=28.72 Aligned_cols=73 Identities=16% Similarity=0.242 Sum_probs=45.2
Q ss_pred EEECCCCCEEEEEeC-----CCeEEEEEcc-CCceEEEEeCCccceEEEE-eCCCCeEEEEe------------------
Q psy13945 5 IAVSSSGSWIAIGQA-----SGVLTLLDLR-TGTSLASWKGHEGEILQLV-TADDGTLISSS------------------ 59 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~-----~~~v~~~~~~-~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~------------------ 59 (86)
-.|++||+++++.-+ .|.|-|||.. ....+..+..+.-.-..+. .|++..++.+.
T Consensus 56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~t 135 (305)
T PF07433_consen 56 GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDT 135 (305)
T ss_pred EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhh
Confidence 478999999887543 4679999988 4555666654432223344 56665444432
Q ss_pred CCCCEEEEeCCCCeEEEe
Q psy13945 60 LDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 60 ~~~~i~~~~~~~~~~~~~ 77 (86)
.+..+-+.|.++|+.+..
T Consensus 136 M~psL~~ld~~sG~ll~q 153 (305)
T PF07433_consen 136 MQPSLVYLDARSGALLEQ 153 (305)
T ss_pred cCCceEEEecCCCceeee
Confidence 334566667777776655
No 312
>KOG2395|consensus
Probab=95.84 E-value=0.042 Score=32.95 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=42.6
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEE-EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEE
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLA-SWKGHEGEILQLV-TADDGTLISSSLDQTISAW 67 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~ 67 (86)
..-+|+.|+.+|.|++||. .+.... .+.+-..+|..+. ..+|.+++..+....+.+.
T Consensus 440 ~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~ 498 (644)
T KOG2395|consen 440 ESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLLLID 498 (644)
T ss_pred CCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEecccEEEEEE
Confidence 3457899999999999996 444433 4566778999999 9999998876666555443
No 313
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=95.75 E-value=0.17 Score=28.84 Aligned_cols=58 Identities=24% Similarity=0.270 Sum_probs=40.4
Q ss_pred eEEEEEccCCceEEEEeCCccceEEEE-eCCCC-eEEEE-eCCCCEEEEeCCCCeEEEeecC
Q psy13945 22 VLTLLDLRTGTSLASWKGHEGEILQLV-TADDG-TLISS-SLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 22 ~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~-~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+|.++|..+++.+.++.- ...+.++. +.+.. .++.. ..++.+.++|..+|+.+..+..
T Consensus 270 eVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 588889999998888764 24566787 76544 44443 4578999999999998888764
No 314
>KOG0882|consensus
Probab=95.55 E-value=0.055 Score=31.83 Aligned_cols=79 Identities=14% Similarity=0.176 Sum_probs=59.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccC------Cce---------EEEEeCCccceEEEE-eCCCCeEEEEeCCCCE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRT------GTS---------LASWKGHEGEILQLV-TADDGTLISSSLDQTI 64 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~---------~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i 64 (86)
||.++.+.+-+..+++.+..|.|.-|.... .++ +..+...+....++. +|++..+.+-+.|..|
T Consensus 146 PV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkV 225 (558)
T KOG0882|consen 146 PVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKV 225 (558)
T ss_pred ceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEE
Confidence 577888888888899999999999998652 111 111222234456777 8999999999999999
Q ss_pred EEEeCCCCeEEEeec
Q psy13945 65 SAWHTNDGSLKCNIQ 79 (86)
Q Consensus 65 ~~~~~~~~~~~~~~~ 79 (86)
+++..++++..+.+.
T Consensus 226 R~F~~KtGklvqeiD 240 (558)
T KOG0882|consen 226 RGFVFKTGKLVQEID 240 (558)
T ss_pred EEEEeccchhhhhhh
Confidence 999999998777664
No 315
>KOG2444|consensus
Probab=95.54 E-value=0.078 Score=28.45 Aligned_cols=62 Identities=18% Similarity=0.299 Sum_probs=42.8
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCc-cceEEEE-eCCCCeEEEE--eCCCCEEEEeCCC
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHE-GEILQLV-TADDGTLISS--SLDQTISAWHTND 71 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~-~~~~~~~~~~--~~~~~i~~~~~~~ 71 (86)
++.+..++..++.++.|+....+.+.....|+ ..+.... ......+... +.+..++.|++..
T Consensus 113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 44578889999999999998888776655555 3333333 4455566555 7777888887753
No 316
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=95.52 E-value=0.044 Score=32.84 Aligned_cols=29 Identities=24% Similarity=0.370 Sum_probs=26.0
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRT 30 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 30 (86)
.+.++|+|+|..++.++..|.+.+||..-
T Consensus 302 P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 302 PTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred ceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 45789999999999999999999999763
No 317
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=95.43 E-value=0.18 Score=26.94 Aligned_cols=77 Identities=19% Similarity=0.202 Sum_probs=51.3
Q ss_pred eeEEEECCCCCEE-EEEeCCCeEEEEEccCC-c-eE--EEE---eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWI-AIGQASGVLTLLDLRTG-T-SL--ASW---KGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~-~-~~--~~~---~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
.+.++|+||++.+ ++-+..+.|..++.... . .. ..+ .......-.+. ..++.++++....+.|.+++.. |
T Consensus 136 pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G 214 (246)
T PF08450_consen 136 PNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-G 214 (246)
T ss_dssp EEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-S
T ss_pred ccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-c
Confidence 3579999999865 46677788998887532 2 21 122 11112245566 7788888888889999999976 7
Q ss_pred eEEEeec
Q psy13945 73 SLKCNIQ 79 (86)
Q Consensus 73 ~~~~~~~ 79 (86)
+.+..+.
T Consensus 215 ~~~~~i~ 221 (246)
T PF08450_consen 215 KLLREIE 221 (246)
T ss_dssp CEEEEEE
T ss_pred cEEEEEc
Confidence 7666554
No 318
>PRK04043 tolB translocation protein TolB; Provisional
Probab=95.26 E-value=0.3 Score=28.57 Aligned_cols=73 Identities=15% Similarity=0.095 Sum_probs=45.2
Q ss_pred eeEEEECCCCCE-EEE-EeC--CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCC--CCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSW-IAI-GQA--SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLD--QTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~-~~~-~~~--~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~--~~i~~~~~~~~~ 73 (86)
+....|+|||+. ++. ... ...|+++|+.+++...... ..+...... +|++..++ +...+ ..|.++++..+.
T Consensus 190 ~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~ 268 (419)
T PRK04043 190 NIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT 268 (419)
T ss_pred eEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc
Confidence 356789999974 553 332 3568888988776544332 334444556 89987664 44333 467777877665
Q ss_pred EE
Q psy13945 74 LK 75 (86)
Q Consensus 74 ~~ 75 (86)
..
T Consensus 269 ~~ 270 (419)
T PRK04043 269 LT 270 (419)
T ss_pred EE
Confidence 43
No 319
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.22 E-value=0.39 Score=29.70 Aligned_cols=68 Identities=19% Similarity=0.288 Sum_probs=45.9
Q ss_pred eEEEECCCCCEEE-EEeCCCeEEEEEccCCce------------EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEe
Q psy13945 3 RCIAVSSSGSWIA-IGQASGVLTLLDLRTGTS------------LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~------------~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~ 68 (86)
..+.++|||++++ ++..+.++.|.|+.+.+. .....--.++.. .. .+++..+.+--.|.++-.|+
T Consensus 324 HGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLH-TaFDg~G~aytslf~dsqv~kwn 402 (635)
T PRK02888 324 HGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLH-TAFDGRGNAYTTLFLDSQIVKWN 402 (635)
T ss_pred cceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcce-EEECCCCCEEEeEeecceeEEEe
Confidence 5789999998766 555688999999876542 222222223322 23 45667777788899999999
Q ss_pred CCC
Q psy13945 69 TND 71 (86)
Q Consensus 69 ~~~ 71 (86)
+..
T Consensus 403 ~~~ 405 (635)
T PRK02888 403 IEA 405 (635)
T ss_pred hHH
Confidence 864
No 320
>KOG2066|consensus
Probab=95.16 E-value=0.19 Score=31.63 Aligned_cols=57 Identities=14% Similarity=0.274 Sum_probs=39.5
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC-----CCeEEEEeCCCCEEEEe
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD-----DGTLISSSLDQTISAWH 68 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-----~~~~~~~~~~~~i~~~~ 68 (86)
+|.++++++.||++.+-.+.+......+. .+.++.+++ +|+ ...+++|+..+ +-++.
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~e 144 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSE 144 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEeh
Confidence 58999999999999988776666544433 345566777 665 55677887777 54443
No 321
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=95.13 E-value=0.21 Score=30.03 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=23.8
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEE
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASW 37 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 37 (86)
+..++++-+.|+++++||+.+++.+...
T Consensus 229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 229 DDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp TTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 6688999999999999999998885443
No 322
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.05 E-value=0.24 Score=26.38 Aligned_cols=66 Identities=17% Similarity=0.297 Sum_probs=44.9
Q ss_pred ECCCCCEEEEEeCCCeEEEEEccCCceEEEE-------e-------CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 7 VSSSGSWIAIGQASGVLTLLDLRTGTSLASW-------K-------GHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 7 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-------~-------~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
+..+++++.+-..+|.+++||+.+++....- . .....|..+. ..+|..+++-+ ++....|+..-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 4457788888899999999999887653221 1 2345666777 77788777654 35667777654
Q ss_pred Ce
Q psy13945 72 GS 73 (86)
Q Consensus 72 ~~ 73 (86)
+.
T Consensus 97 ~~ 98 (219)
T PF07569_consen 97 GC 98 (219)
T ss_pred ce
Confidence 43
No 323
>KOG2066|consensus
Probab=94.97 E-value=0.53 Score=29.86 Aligned_cols=76 Identities=18% Similarity=0.199 Sum_probs=45.6
Q ss_pred CeeEEEECCC-----CCEEEEEeCCCeEEEEEcc--CCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 1 LIRCIAVSSS-----GSWIAIGQASGVLTLLDLR--TGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 1 ~i~~~~~~~~-----~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
|+..++++|| .+.+++|+..| +.++.-. ..+....+....++|.++. ..+..++=+ .|--++++|...+.
T Consensus 114 piksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~-W~g~lIAWa-nd~Gv~vyd~~~~~ 190 (846)
T KOG2066|consen 114 PIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIK-WRGNLIAWA-NDDGVKVYDTPTRQ 190 (846)
T ss_pred cceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEE-ecCcEEEEe-cCCCcEEEeccccc
Confidence 5678899997 36688888887 6655422 1111223444567777774 234444433 34457888887777
Q ss_pred EEEeec
Q psy13945 74 LKCNIQ 79 (86)
Q Consensus 74 ~~~~~~ 79 (86)
.+..+.
T Consensus 191 ~l~~i~ 196 (846)
T KOG2066|consen 191 RLTNIP 196 (846)
T ss_pred eeeccC
Confidence 666554
No 324
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=94.93 E-value=0.38 Score=27.98 Aligned_cols=71 Identities=18% Similarity=0.186 Sum_probs=34.4
Q ss_pred EECCCCCEEE-EEeCCC--eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 6 AVSSSGSWIA-IGQASG--VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 6 ~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
+|.+||+.++ .+..++ .+.+.|+.+++..+...+......... +++.+.++-......+.-.|+.+.+...
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~ 116 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERV 116 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEE
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEE
Confidence 5677886554 444444 577778888877655444322122222 5666665545555677778888765443
No 325
>KOG2444|consensus
Probab=94.90 E-value=0.26 Score=26.59 Aligned_cols=72 Identities=13% Similarity=0.117 Sum_probs=44.3
Q ss_pred CCEEEEEeCCCeEEEEEccC-CceEEEEeCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCC
Q psy13945 11 GSWIAIGQASGVLTLLDLRT-GTSLASWKGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTNDGSLKCNIQGPT 82 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 82 (86)
+..+.+|..++.+.+|.... +......-.-...+-++. . .++....+++.++.++.|++..++.+.....|.
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~ 144 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHN 144 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeecccc
Confidence 35577888899999987641 111111111122333332 2 234567788899999999998887777666665
No 326
>KOG3621|consensus
Probab=94.73 E-value=0.17 Score=31.39 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=51.5
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCce---EE--EE-eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTS---LA--SW-KGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~--~~-~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
.....+++..+++.|+..+.|.++.+..+.. .. .+ +.|+..|+++. ++++..+++|...|+|.+-.+..
T Consensus 80 ~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 80 CVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred EEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 4556677778888899999999997764322 11 11 23567899999 99999999999999988766554
No 327
>KOG1912|consensus
Probab=94.71 E-value=0.24 Score=31.41 Aligned_cols=68 Identities=19% Similarity=0.277 Sum_probs=50.8
Q ss_pred EEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-e---CCC-CeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 13 WIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-T---ADD-GTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 13 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~---~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+|++++..|.|-+||...+..+..+..+..++..+. - ++. ..++.-....++-+|+..+|..++...+
T Consensus 81 liAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~y 153 (1062)
T KOG1912|consen 81 LIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDY 153 (1062)
T ss_pred eEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeecccc
Confidence 477888899999999988887777777766665554 2 334 5566677788999999988887776543
No 328
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=94.69 E-value=0.38 Score=27.38 Aligned_cols=66 Identities=17% Similarity=0.301 Sum_probs=41.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccC-CceEEEEeCC------------ccceE---EEE-eCCCCeEEEEeCCCCE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRT-GTSLASWKGH------------EGEIL---QLV-TADDGTLISSSLDQTI 64 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~------------~~~v~---~~~-~~~~~~~~~~~~~~~i 64 (86)
|..+.|+++|++|++.+ --++.+||+.- ..++.+..-| ...|+ -+. +.+...+++|+.....
T Consensus 283 ISD~kFs~ngryIlsRd-yltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNf 361 (460)
T COG5170 283 ISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNF 361 (460)
T ss_pred hcceEEcCCCcEEEEec-cceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccce
Confidence 67889999999988765 56899999863 3334443222 11222 233 4566667777766665
Q ss_pred EEEe
Q psy13945 65 SAWH 68 (86)
Q Consensus 65 ~~~~ 68 (86)
.++-
T Consensus 362 giyp 365 (460)
T COG5170 362 GIYP 365 (460)
T ss_pred eeec
Confidence 5554
No 329
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=94.17 E-value=0.59 Score=26.93 Aligned_cols=28 Identities=14% Similarity=0.274 Sum_probs=21.6
Q ss_pred CCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 52 DGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 52 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+..++.+..++.+.+.|..+|+.+....
T Consensus 335 ~g~l~v~~~~G~l~~ld~~tG~~~~~~~ 362 (394)
T PRK11138 335 NGYLVVGDSEGYLHWINREDGRFVAQQK 362 (394)
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 4556677888999999999998776654
No 330
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=93.83 E-value=0.65 Score=26.22 Aligned_cols=79 Identities=16% Similarity=0.169 Sum_probs=53.0
Q ss_pred eEEEECCC-CCEEEEEeCCC-eEEEEEccCCceEEEEeCCccceEE--EE-eCCCCeEEEEe-----CCCCEEEEeCC-C
Q psy13945 3 RCIAVSSS-GSWIAIGQASG-VLTLLDLRTGTSLASWKGHEGEILQ--LV-TADDGTLISSS-----LDQTISAWHTN-D 71 (86)
Q Consensus 3 ~~~~~~~~-~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~v~~--~~-~~~~~~~~~~~-----~~~~i~~~~~~-~ 71 (86)
..++.+|+ ...++.+.+-| ...++|..+++....+....+.-+. -. ++++.++++.- ..+.|-+||.. .
T Consensus 8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~ 87 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARG 87 (305)
T ss_pred cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCC
Confidence 46778884 45555666655 4788999999887776654443321 22 78899988754 34689999998 5
Q ss_pred CeEEEeecCC
Q psy13945 72 GSLKCNIQGP 81 (86)
Q Consensus 72 ~~~~~~~~~~ 81 (86)
.+.+.++..|
T Consensus 88 ~~ri~E~~s~ 97 (305)
T PF07433_consen 88 YRRIGEFPSH 97 (305)
T ss_pred cEEEeEecCC
Confidence 5666666543
No 331
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=93.65 E-value=0.75 Score=26.30 Aligned_cols=71 Identities=20% Similarity=0.406 Sum_probs=49.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCc-----eEEEEeCCc------------cceEEEE-e-C-CCCeEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGT-----SLASWKGHE------------GEILQLV-T-A-DDGTLISSSLD 61 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~~~~------------~~v~~~~-~-~-~~~~~~~~~~~ 61 (86)
|+++.|...|.++++|+..|.+.++...... ....++.|. .+|..+. . + ....++..+.|
T Consensus 29 ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlstNd 108 (460)
T COG5170 29 ITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLSTND 108 (460)
T ss_pred eeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEecCC
Confidence 6788898889999999999999988754221 122233332 2455565 3 2 34567888899
Q ss_pred CCEEEEeCCCC
Q psy13945 62 QTISAWHTNDG 72 (86)
Q Consensus 62 ~~i~~~~~~~~ 72 (86)
.+|++|.+...
T Consensus 109 ktiKlWKiyek 119 (460)
T COG5170 109 KTIKLWKIYEK 119 (460)
T ss_pred ceeeeeeeecc
Confidence 99999987643
No 332
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=93.48 E-value=0.78 Score=26.03 Aligned_cols=69 Identities=19% Similarity=0.211 Sum_probs=47.2
Q ss_pred eEEEECCCCCEEEEEeC----CCeEEEEEccCC--ce--EEEEeCCccceEEEE-eCCCCeEEEEe-CCCCEEEEeCCC
Q psy13945 3 RCIAVSSSGSWIAIGQA----SGVLTLLDLRTG--TS--LASWKGHEGEILQLV-TADDGTLISSS-LDQTISAWHTND 71 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~--~~--~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~~~i~~~~~~~ 71 (86)
..++++|+++.+++... .+.|..|.+... +. +.........-..+. .+++..++.+. .++.+.++++..
T Consensus 40 s~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~ 118 (345)
T PF10282_consen 40 SWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDD 118 (345)
T ss_dssp CCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred ceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccC
Confidence 45788999999888776 468888887653 33 333332233334566 88988887665 588999999876
No 333
>KOG2041|consensus
Probab=93.26 E-value=0.39 Score=30.45 Aligned_cols=68 Identities=9% Similarity=0.141 Sum_probs=49.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE--eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW--KGHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
|.-+.|+.+.+.+.+++.+|.|.+|-+-.+.-...+ ...++-|.++. ..+|..+.-...|+.+.+=.+
T Consensus 74 V~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsv 144 (1189)
T KOG2041|consen 74 VMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSV 144 (1189)
T ss_pred EEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEee
Confidence 567889988899999999999999988765432222 12345677787 788888888888877765443
No 334
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=93.21 E-value=0.69 Score=27.25 Aligned_cols=42 Identities=7% Similarity=-0.044 Sum_probs=34.3
Q ss_pred cceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCCC
Q psy13945 42 GEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQGPTE 83 (86)
Q Consensus 42 ~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 83 (86)
-.+.++. +|++.+.+....-+.|.++|+..+..++.++|.++
T Consensus 308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRd 350 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRD 350 (415)
T ss_pred ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCcc
Confidence 3467788 89988888877779999999999888888877654
No 335
>KOG1832|consensus
Probab=93.16 E-value=0.34 Score=31.49 Aligned_cols=50 Identities=14% Similarity=0.237 Sum_probs=41.9
Q ss_pred EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCCCCC
Q psy13945 36 SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQGPTEPV 85 (86)
Q Consensus 36 ~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 85 (86)
.+..++...+|+. +.....++.|...+.|++++..+|.......+|.+.|
T Consensus 1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~Sav 1146 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAV 1146 (1516)
T ss_pred hhhccccceeeEEeecCCceEEeeeccceEEEEEccCcccccccccccccc
Confidence 3445566677888 8888999999999999999999998888888888765
No 336
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=92.92 E-value=0.84 Score=24.78 Aligned_cols=61 Identities=21% Similarity=0.275 Sum_probs=38.1
Q ss_pred CCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 8 SSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 8 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
...++.++.|.++| +++++........... ....|..+. -++-..++.-+ |+.+.++++..
T Consensus 4 ~~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~ 65 (275)
T PF00780_consen 4 DSWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDS 65 (275)
T ss_pred ccCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchh
Confidence 34577888888888 8888873222222222 222377777 67666655443 48999998764
No 337
>KOG2114|consensus
Probab=92.84 E-value=1.7 Score=28.11 Aligned_cols=78 Identities=12% Similarity=0.079 Sum_probs=46.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCce-EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS-LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
||+++++..++...+.......|.+|.+....+ ...+..+.....|.. ++....+++ +.+..+.+++.....+...+
T Consensus 173 pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIc-a~~e~l~fY~sd~~~~cfaf 251 (933)
T KOG2114|consen 173 PITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFIC-AGSEFLYFYDSDGRGPCFAF 251 (933)
T ss_pred CceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEE-ecCceEEEEcCCCcceeeee
Confidence 689999999888744444566788888774442 344566666777766 443332333 33445566665544444444
Q ss_pred c
Q psy13945 79 Q 79 (86)
Q Consensus 79 ~ 79 (86)
.
T Consensus 252 ~ 252 (933)
T KOG2114|consen 252 E 252 (933)
T ss_pred c
Confidence 3
No 338
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=92.50 E-value=1.2 Score=25.68 Aligned_cols=58 Identities=21% Similarity=0.311 Sum_probs=36.3
Q ss_pred CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEe
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~ 68 (86)
+..++.++.++.+...|..+++.+.........+.+--...+..++.++.++.+..++
T Consensus 335 ~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t~~G~l~~~~ 392 (394)
T PRK11138 335 NGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVVADDKLLIQARDGTVYAIT 392 (394)
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEEECCEEEEEeCCceEEEEe
Confidence 3456777888999999988888766554332222211111344666778888877665
No 339
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=92.31 E-value=0.25 Score=17.21 Aligned_cols=23 Identities=17% Similarity=0.247 Sum_probs=12.1
Q ss_pred eEEEECCCCCEEEEEeCCCeEEE
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTL 25 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~ 25 (86)
.+++..++|+.+++-.....|.+
T Consensus 5 ~gvav~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 5 HGVAVDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EEEEEETTSEEEEEECCCTEEEE
T ss_pred cEEEEeCCCCEEEEECCCCEEEE
Confidence 45555566665555544444443
No 340
>KOG3621|consensus
Probab=92.12 E-value=0.81 Score=28.66 Aligned_cols=67 Identities=16% Similarity=0.273 Sum_probs=44.3
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEE-EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLA-SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
-+++..+.+++.|...|.+++++...++... +..+....+.... +++..+++.++..+.|.++.+..
T Consensus 39 Tc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~ 107 (726)
T KOG3621|consen 39 TCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNK 107 (726)
T ss_pred EEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhc
Confidence 3455677899999999999999976555432 2222223333333 66677777777778888777654
No 341
>KOG4649|consensus
Probab=92.11 E-value=1.3 Score=24.87 Aligned_cols=35 Identities=23% Similarity=0.170 Sum_probs=28.7
Q ss_pred EECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC
Q psy13945 6 AVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH 40 (86)
Q Consensus 6 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 40 (86)
...+++.+|.+++.|+..+..|.++...+.+.+..
T Consensus 100 ~~d~~~glIycgshd~~~yalD~~~~~cVykskcg 134 (354)
T KOG4649|consen 100 QCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCG 134 (354)
T ss_pred EEcCCCceEEEecCCCcEEEecccccceEEecccC
Confidence 34678999999999999999999888777665543
No 342
>KOG1920|consensus
Probab=92.06 E-value=1.8 Score=29.01 Aligned_cols=65 Identities=15% Similarity=0.213 Sum_probs=39.0
Q ss_pred EEEECCCCCEEEE-----EeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEe---CCCCEEEEeC
Q psy13945 4 CIAVSSSGSWIAI-----GQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSS---LDQTISAWHT 69 (86)
Q Consensus 4 ~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~---~~~~i~~~~~ 69 (86)
.+.|.-||.++++ ......+++||.. +..-..-......-.+++ .|.|.++++.. .+..|.++..
T Consensus 200 ~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr 273 (1265)
T KOG1920|consen 200 SISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER 273 (1265)
T ss_pred eEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEec
Confidence 5889999999887 3334789999965 433211111112223556 67777776543 3446777663
No 343
>PRK04043 tolB translocation protein TolB; Provisional
Probab=91.82 E-value=1.7 Score=25.67 Aligned_cols=73 Identities=22% Similarity=0.102 Sum_probs=41.9
Q ss_pred eEEEECCCCCEEEE-EeCC--CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEe-CC--CCEEEEeCCCCeEE
Q psy13945 3 RCIAVSSSGSWIAI-GQAS--GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSS-LD--QTISAWHTNDGSLK 75 (86)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~~--~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~--~~i~~~~~~~~~~~ 75 (86)
....|+|||+.++. .+.+ ..+.++|+..++.. .+........... +|++..++-.+ .. ..|.+.++..++..
T Consensus 236 ~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~-~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~ 314 (419)
T PRK04043 236 VVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLT-QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVE 314 (419)
T ss_pred EeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEE-EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeE
Confidence 35679999976553 3333 46788887766543 3332222223345 78887665333 22 35777777766553
Q ss_pred E
Q psy13945 76 C 76 (86)
Q Consensus 76 ~ 76 (86)
+
T Consensus 315 r 315 (419)
T PRK04043 315 Q 315 (419)
T ss_pred e
Confidence 3
No 344
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=91.77 E-value=1 Score=27.59 Aligned_cols=59 Identities=15% Similarity=0.194 Sum_probs=39.7
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
..-+++.+++.|-|++||......-..+.+-...|..+. ..+|.+++..+.. .+.+-|+
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~ 631 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDV 631 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEec
Confidence 456899999999999999543222233455667888888 8888887655443 4444444
No 345
>PRK02888 nitrous-oxide reductase; Validated
Probab=91.19 E-value=2.5 Score=26.51 Aligned_cols=52 Identities=12% Similarity=0.070 Sum_probs=33.6
Q ss_pred CeEEEEEccC-----CceEEEEeCCccceEEEE-eCCCCeEE-EEeCCCCEEEEeCCCCe
Q psy13945 21 GVLTLLDLRT-----GTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQTISAWHTNDGS 73 (86)
Q Consensus 21 ~~v~~~~~~~-----~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 73 (86)
..|.+.|..+ .+....+. -......+. +|++..++ ++..+..+.+.|+...+
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred CEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 4577777665 23333332 233446677 89999876 55678999999987643
No 346
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=91.13 E-value=1.3 Score=23.25 Aligned_cols=64 Identities=27% Similarity=0.369 Sum_probs=39.7
Q ss_pred CCCEEEEEeCCCe-EEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 10 SGSWIAIGQASGV-LTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 10 ~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
++ .++....++. +.+ |..+++..- .............++..++..+.++.+.+||.++++....
T Consensus 173 ~~-~v~~~~~~g~~~~~-d~~tg~~~w--~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 173 DG-RVYVSSGDGRVVAV-DLATGEKLW--SKPISGIYSLPSVDGGTLYVTSSDGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp TT-EEEEECCTSSEEEE-ETTTTEEEE--EECSS-ECECEECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred CC-EEEEEcCCCeEEEE-ECCCCCEEE--EecCCCccCCceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence 44 5555555664 555 988887542 2222222221245566666666899999999999988764
No 347
>KOG4499|consensus
Probab=91.06 E-value=1.6 Score=24.10 Aligned_cols=52 Identities=17% Similarity=0.180 Sum_probs=40.5
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE--eCCCCeEE
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV--TADDGTLI 56 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~ 56 (86)
++...+|.+.++.-+.+++...|..+++.+..+.-...+++|.. -++-..++
T Consensus 217 m~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGkn~d~~y 270 (310)
T KOG4499|consen 217 MTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGKNLDILY 270 (310)
T ss_pred ceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCCCccEEE
Confidence 34456788888888899999999999999988887788888877 24444443
No 348
>KOG1645|consensus
Probab=90.87 E-value=0.52 Score=27.65 Aligned_cols=47 Identities=15% Similarity=0.058 Sum_probs=35.3
Q ss_pred EEEeCCccceEEEE-eCCCC-eEEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 35 ASWKGHEGEILQLV-TADDG-TLISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 35 ~~~~~~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
.-+..+...|..++ +|... ++..++.+.+|.+.|+++..++..+..+
T Consensus 187 q~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~ 235 (463)
T KOG1645|consen 187 QILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY 235 (463)
T ss_pred hcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc
Confidence 33344556788888 78766 5678899999999999988777766554
No 349
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=90.49 E-value=0.52 Score=17.47 Aligned_cols=16 Identities=25% Similarity=0.254 Sum_probs=10.7
Q ss_pred eEEEECCCCCEEEEEe
Q psy13945 3 RCIAVSSSGSWIAIGQ 18 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (86)
....|+|||+.|+-.+
T Consensus 12 ~~p~~SpDGk~i~f~s 27 (39)
T PF07676_consen 12 GSPAWSPDGKYIYFTS 27 (39)
T ss_dssp EEEEE-TTSSEEEEEE
T ss_pred cCEEEecCCCEEEEEe
Confidence 4678999998766443
No 350
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=90.48 E-value=2.7 Score=25.67 Aligned_cols=60 Identities=15% Similarity=0.121 Sum_probs=36.1
Q ss_pred CeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 21 GVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 21 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+.+.-+|+.+++..=..........+...-.+..++.+..++.++++|.++|+.+..++-
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 456777777776543322111111111111344566677899999999999999887753
No 351
>KOG0882|consensus
Probab=90.23 E-value=0.098 Score=30.88 Aligned_cols=63 Identities=17% Similarity=0.255 Sum_probs=47.9
Q ss_pred CCCEEEEEeCCCeEEEEEccC--C-ceEEEEeCCccceEEEE-eCCCCeEEEEeC-CCCEEEEeCCCC
Q psy13945 10 SGSWIAIGQASGVLTLLDLRT--G-TSLASWKGHEGEILQLV-TADDGTLISSSL-DQTISAWHTNDG 72 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~--~-~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~-~~~i~~~~~~~~ 72 (86)
...++.+++.|+.++.|--.. + +.+..+..|...+.++. +.++..+.+.+. |+.++++|+.+-
T Consensus 19 ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 19 KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 457889999999999996332 2 22345567778888888 888888888777 999999987653
No 352
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=90.13 E-value=2.4 Score=24.61 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=33.1
Q ss_pred eEEEECCCCCEEEEE-----eCCCeEEEEEccCCceEEE-EeCCccceEEEE-eCCCCeEEEE
Q psy13945 3 RCIAVSSSGSWIAIG-----QASGVLTLLDLRTGTSLAS-WKGHEGEILQLV-TADDGTLISS 58 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~~~~ 58 (86)
....++||+++++.+ ++...++++|+.+++.+.. +.... ...+. .+++..++-.
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~--~~~~~W~~d~~~~~y~ 187 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPK--FSSVSWSDDGKGFFYT 187 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEE--SEEEEECTTSSEEEEE
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccc--cceEEEeCCCCEEEEE
Confidence 357889999987743 2234699999999876542 22211 12366 6776665433
No 353
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=90.13 E-value=2.5 Score=24.83 Aligned_cols=69 Identities=17% Similarity=0.226 Sum_probs=44.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC--------ccceEEEE-e---C--CC---CeEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH--------EGEILQLV-T---A--DD---GTLISSSLDQT 63 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--------~~~v~~~~-~---~--~~---~~~~~~~~~~~ 63 (86)
+|++++.+ |--+++.|..+|.+.+.|++....+..-... ...+.++. . . ++ ..++.|...+.
T Consensus 88 ~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~ 166 (395)
T PF08596_consen 88 PVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGN 166 (395)
T ss_dssp SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSE
T ss_pred cEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCC
Confidence 46778875 5678899999999999999876665542211 12344443 2 1 22 34667788888
Q ss_pred EEEEeCC
Q psy13945 64 ISAWHTN 70 (86)
Q Consensus 64 i~~~~~~ 70 (86)
+.+|.+.
T Consensus 167 v~~fkIl 173 (395)
T PF08596_consen 167 VLTFKIL 173 (395)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8888664
No 354
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=89.97 E-value=0.52 Score=16.63 Aligned_cols=25 Identities=24% Similarity=0.279 Sum_probs=19.5
Q ss_pred eEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 54 TLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 54 ~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
.++.+..++.+..+|.++|+.+..+
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 4666778899999999888877654
No 355
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=89.57 E-value=3.3 Score=25.31 Aligned_cols=69 Identities=13% Similarity=0.162 Sum_probs=43.9
Q ss_pred CeeEEEECCCCCEEE--EEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC---CCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIA--IGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLD---QTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~---~~i~~~~~~~~ 72 (86)
+|...+|.|++..++ .|-..-.+.++|++.. +. +-...++-..+. +|..++++.++.+ +.+-+|+....
T Consensus 276 pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~--~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~r 350 (561)
T COG5354 276 PVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LR--FYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGR 350 (561)
T ss_pred cceeeeecccCCceeEEecccccceeecccccc-eE--EecCCcccccccccCcccEEEEecCCccccceEEeccCCc
Confidence 578899999876544 4567778888887644 22 222222223444 6778888776655 46778876654
No 356
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=89.45 E-value=2.6 Score=25.04 Aligned_cols=68 Identities=19% Similarity=0.190 Sum_probs=36.5
Q ss_pred EEEECCCCCEEE-EEeCCCe--EEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCCC--EEEEeCCCC
Q psy13945 4 CIAVSSSGSWIA-IGQASGV--LTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQT--ISAWHTNDG 72 (86)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~--v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~~--i~~~~~~~~ 72 (86)
..+|+|||+.++ +...++. +++.|+..+.... +....+.-..-. +|++..++ ..+..+. |.+.+...+
T Consensus 242 ~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~ 316 (425)
T COG0823 242 APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGS 316 (425)
T ss_pred CccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCC
Confidence 357899997655 5555555 5566666555322 322222112333 68888876 4444444 444455444
No 357
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=89.41 E-value=2.7 Score=24.05 Aligned_cols=67 Identities=13% Similarity=0.161 Sum_probs=41.8
Q ss_pred CCCCCEEEEEeC---------CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 8 SSSGSWIAIGQA---------SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 8 ~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
|||+++++...+ .+...++|+.+++....... ...+.... +|++..++-.. ++.|.+.+..++...+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~ 77 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQ 77 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEE
Confidence 577877665322 34678889887665333222 45566677 89988876554 5678888877775444
No 358
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=89.35 E-value=3.8 Score=25.78 Aligned_cols=59 Identities=15% Similarity=0.217 Sum_probs=41.6
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEe-CCccceEEEE---eCCCCeEEEEeCCCCEEEEe
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWK-GHEGEILQLV---TADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~~---~~~~~~~~~~~~~~~i~~~~ 68 (86)
-+...+..+....+.+||...+.....-. ...+.|..++ .|+++.+++.+..+.|.++.
T Consensus 40 ~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 40 IKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred cCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 34444455556789999988766433222 3467788887 38899999999999888774
No 359
>KOG3616|consensus
Probab=89.20 E-value=3.1 Score=27.12 Aligned_cols=32 Identities=13% Similarity=0.285 Sum_probs=26.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCce
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS 33 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 33 (86)
++++.-+|.++.++.+..|+.+.+++......
T Consensus 17 ~~aiqshp~~~s~v~~~~d~si~lfn~~~r~q 48 (1636)
T KOG3616|consen 17 TTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQ 48 (1636)
T ss_pred eeeeeecCCCceEEEEecCCcEEEEeecccch
Confidence 45667789999999999999999999765443
No 360
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=89.03 E-value=3.5 Score=24.84 Aligned_cols=69 Identities=14% Similarity=0.138 Sum_probs=43.5
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEEEeCCcc------ceEEEE-eCCC-CeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 12 SWIAIGQASGVLTLLDLRTGTSLASWKGHEG------EILQLV-TADD-GTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 12 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------~v~~~~-~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
..++.++.++.+..+|..+++..=....... .+..-- ...+ ..++.+..++.+..+|.++|+.+..+..
T Consensus 62 g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~ 138 (488)
T cd00216 62 GDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGN 138 (488)
T ss_pred CEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecC
Confidence 4455666788999999888876533322111 010000 1123 5666777899999999999998877643
No 361
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=89.00 E-value=3.4 Score=24.75 Aligned_cols=55 Identities=11% Similarity=0.224 Sum_probs=32.9
Q ss_pred CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
|.++...+.+ .+.+||..+++.+...... .|..+. ++++..++-.+ +..+.+++.
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t-~~~i~il~~ 172 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVT-KDSIYILKY 172 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE--S-SEEEEEE
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEe-CCeEEEEEe
Confidence 6666665544 8999999998888877654 367777 88888776665 446666554
No 362
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=88.98 E-value=2 Score=23.06 Aligned_cols=27 Identities=11% Similarity=0.294 Sum_probs=21.7
Q ss_pred CCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 50 ADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 50 ~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
.++.+++.-..++.+++||+.+++++.
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~~ 46 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAVL 46 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeecc
Confidence 456778888999999999998876543
No 363
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=88.54 E-value=4.7 Score=25.80 Aligned_cols=71 Identities=24% Similarity=0.283 Sum_probs=46.0
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccC---------Cce--EEE-E--------eCCccceEEEE-eCC---CCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRT---------GTS--LAS-W--------KGHEGEILQLV-TAD---DGTLIS 57 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------~~~--~~~-~--------~~~~~~v~~~~-~~~---~~~~~~ 57 (86)
|..+.++++|.+++..+..+...+.--+. ++. ..+ . ......|..+. +|. +..++.
T Consensus 87 v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~v 166 (717)
T PF10168_consen 87 VHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLVV 166 (717)
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEEE
Confidence 67889999999988877665544432111 111 111 1 11223566777 764 678889
Q ss_pred EeCCCCEEEEeCCCC
Q psy13945 58 SSLDQTISAWHTNDG 72 (86)
Q Consensus 58 ~~~~~~i~~~~~~~~ 72 (86)
-..|+.+++||+...
T Consensus 167 Ltsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 167 LTSDNTLRLYDISDP 181 (717)
T ss_pred EecCCEEEEEecCCC
Confidence 999999999999753
No 364
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=88.52 E-value=0.82 Score=17.01 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=20.8
Q ss_pred CCCCEEEE-EeCCCeEEEEEccCCceEEEEeC
Q psy13945 9 SSGSWIAI-GQASGVLTLLDLRTGTSLASWKG 39 (86)
Q Consensus 9 ~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~ 39 (86)
|+++.++. ...++.|.++|..+++.......
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 46665554 44578899999887777665543
No 365
>KOG3617|consensus
Probab=88.21 E-value=1.3 Score=28.89 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=26.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLR 29 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 29 (86)
+|..+.|+++|..+.+++.-|.+.+|...
T Consensus 103 ~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 103 PIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 57789999999999999999999999765
No 366
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=88.21 E-value=0.87 Score=16.95 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=21.1
Q ss_pred EEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 55 LISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 55 ~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+..+..++.+...|.++|+.+..+..
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 34558899999999999999887753
No 367
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=88.12 E-value=3.8 Score=24.17 Aligned_cols=77 Identities=14% Similarity=0.214 Sum_probs=49.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCce-------------------------------------------EEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS-------------------------------------------LASW 37 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------------------------------------------~~~~ 37 (86)
.|+.+.|+++..-++.+...|.+.+|.....+. ...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 378899999877788888889988885431100 0011
Q ss_pred eCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 38 KGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 38 ~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
....++|.+++..+--.++.|..++.+.+.|+|....+..
T Consensus 83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~ 122 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYN 122 (395)
T ss_dssp ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEee
Confidence 2234567777644666777888999999999987766654
No 368
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=88.08 E-value=3.3 Score=23.50 Aligned_cols=78 Identities=17% Similarity=0.261 Sum_probs=42.9
Q ss_pred eEEEECCCCCEEEEEeC-CCeEEEEEccC--CceEE-----EEeCCccceEEEE-eCCCCeEEEEeCCC-CEEEEeCCCC
Q psy13945 3 RCIAVSSSGSWIAIGQA-SGVLTLLDLRT--GTSLA-----SWKGHEGEILQLV-TADDGTLISSSLDQ-TISAWHTNDG 72 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~~-----~~~~~~~~v~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~ 72 (86)
+.++||||++.++.+.. ...+.-++... +.... .+....+.-=.+. ..++.+.+++...+ .|..|+.. +
T Consensus 166 NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G 244 (307)
T COG3386 166 NGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-G 244 (307)
T ss_pred CceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-C
Confidence 57999999976665554 47777777652 11111 1111111111233 44566665544443 78888876 7
Q ss_pred eEEEeecCC
Q psy13945 73 SLKCNIQGP 81 (86)
Q Consensus 73 ~~~~~~~~~ 81 (86)
+.+..+.-.
T Consensus 245 ~l~~~i~lP 253 (307)
T COG3386 245 KLLGEIKLP 253 (307)
T ss_pred cEEEEEECC
Confidence 766665543
No 369
>KOG1920|consensus
Probab=87.50 E-value=7.1 Score=26.61 Aligned_cols=65 Identities=18% Similarity=0.072 Sum_probs=46.5
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAW 67 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~ 67 (86)
|.++.|..+.+.++.+...|.+.+.|..+..... ...-...|.++. +|+..+++-.....++.+-
T Consensus 71 i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~ei-vg~vd~GI~aaswS~Dee~l~liT~~~tll~m 136 (1265)
T KOG1920|consen 71 IVSVQFLADTNSICVITALGDIILVDPETLELEI-VGNVDNGISAASWSPDEELLALITGRQTLLFM 136 (1265)
T ss_pred eEEEEEecccceEEEEecCCcEEEEcccccceee-eeeccCceEEEeecCCCcEEEEEeCCcEEEEE
Confidence 5677788888888888899999998866544321 122345678888 8999998877776666543
No 370
>KOG1916|consensus
Probab=87.16 E-value=0.6 Score=30.42 Aligned_cols=73 Identities=12% Similarity=0.219 Sum_probs=45.0
Q ss_pred CCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceE----------EEE--eCCCCeEEEEeCCCCEEEEeCC-----C
Q psy13945 9 SSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEIL----------QLV--TADDGTLISSSLDQTISAWHTN-----D 71 (86)
Q Consensus 9 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~----------~~~--~~~~~~~~~~~~~~~i~~~~~~-----~ 71 (86)
++.-++..+..++++++........ .-+++|...+. -+. +|||..++.+..|+.++.|.+. .
T Consensus 193 ~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~ 271 (1283)
T KOG1916|consen 193 VNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIV 271 (1283)
T ss_pred cccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeecccc
Confidence 3556677888888888776543222 22233433222 223 7999999999999998888763 2
Q ss_pred CeEEEeecCCC
Q psy13945 72 GSLKCNIQGPT 82 (86)
Q Consensus 72 ~~~~~~~~~~~ 82 (86)
.+|+...+.|.
T Consensus 272 ~rclhewkphd 282 (1283)
T KOG1916|consen 272 HRCLHEWKPHD 282 (1283)
T ss_pred HhhhhccCCCC
Confidence 24555555443
No 371
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=86.76 E-value=7.1 Score=25.87 Aligned_cols=66 Identities=17% Similarity=0.137 Sum_probs=47.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEE----EccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLL----DLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~ 68 (86)
|.++.+-++...++.+..+|.|.++ +...... .....-...|.+++ +||...++....++++.+-.
T Consensus 78 ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~-E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt 148 (928)
T PF04762_consen 78 IVSFQYLADSESLCIALASGDIILVREDPDPDEDEI-EIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT 148 (928)
T ss_pred EEEEEeccCCCcEEEEECCceEEEEEccCCCCCcee-EEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe
Confidence 5577788888888888889999888 4333322 22222456789999 99999998888888776554
No 372
>KOG4499|consensus
Probab=86.50 E-value=4 Score=22.70 Aligned_cols=81 Identities=14% Similarity=0.104 Sum_probs=49.1
Q ss_pred EEEECCCCCE-EEEEeCCCeEEEEE--ccCCce-----EEEEeCCc---cce-EEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 4 CIAVSSSGSW-IAIGQASGVLTLLD--LRTGTS-----LASWKGHE---GEI-LQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 4 ~~~~~~~~~~-~~~~~~~~~v~~~~--~~~~~~-----~~~~~~~~---~~v-~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
.++|+.|... .+.-+.+.++..|| ..++.. +..++... ... -.+. .-++.++++.-..+++...|..
T Consensus 162 gl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~ 241 (310)
T KOG4499|consen 162 GLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPT 241 (310)
T ss_pred cccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCC
Confidence 5677766554 44666677887777 444433 33333211 000 0122 3356677777788899999999
Q ss_pred CCeEEEeecCCCCC
Q psy13945 71 DGSLKCNIQGPTEP 84 (86)
Q Consensus 71 ~~~~~~~~~~~~~~ 84 (86)
+|+.+.++.-....
T Consensus 242 tGK~L~eiklPt~q 255 (310)
T KOG4499|consen 242 TGKILLEIKLPTPQ 255 (310)
T ss_pred CCcEEEEEEcCCCc
Confidence 99999888755443
No 373
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=86.47 E-value=6.8 Score=25.36 Aligned_cols=68 Identities=19% Similarity=0.260 Sum_probs=44.3
Q ss_pred CCEEEEEeCCCeEEEEEccCCceEEEEeCCccce-------------EEEE-eC--CCCeEEEEeC----------CCCE
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEI-------------LQLV-TA--DDGTLISSSL----------DQTI 64 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v-------------~~~~-~~--~~~~~~~~~~----------~~~i 64 (86)
+..++.+..|+.+.-.|.++++..-.+.. ++.+ .... .| .+..++.++. ++.|
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I 338 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI 338 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence 45777888899999999999988755422 1111 1112 22 2334444432 5789
Q ss_pred EEEeCCCCeEEEeec
Q psy13945 65 SAWHTNDGSLKCNIQ 79 (86)
Q Consensus 65 ~~~~~~~~~~~~~~~ 79 (86)
+-+|.++|+.+..+.
T Consensus 339 ~A~Da~TGkl~W~~~ 353 (764)
T TIGR03074 339 RAFDVNTGALVWAWD 353 (764)
T ss_pred EEEECCCCcEeeEEe
Confidence 999999999888774
No 374
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=84.86 E-value=6.1 Score=23.38 Aligned_cols=34 Identities=35% Similarity=0.343 Sum_probs=26.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSL 34 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 34 (86)
++..++.||++++++.-..++.+.+...+-.+..
T Consensus 218 ~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~ 251 (410)
T PF04841_consen 218 PIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKL 251 (410)
T ss_pred CeEEEEECCCCCEEEEEECCCCEEEEECccccee
Confidence 4678999999999998888899988876544443
No 375
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=84.22 E-value=6.2 Score=22.94 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=47.2
Q ss_pred eeEEEECCCCCEEEEEeCC-CeEEEEEccCCceEE----EEeCCccceEEEE-eCCCCeEEEE-eCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQAS-GVLTLLDLRTGTSLA----SWKGHEGEILQLV-TADDGTLISS-SLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~----~~~~~~~~v~~~~-~~~~~~~~~~-~~~~~i~~~~~~~ 71 (86)
+....+.|+++++++.+.. -.+.+|++..+.... .++ ....-..+. +|++...... -.+++|.+|.+..
T Consensus 147 ~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~-~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~ 222 (346)
T COG2706 147 VHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVK-PGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP 222 (346)
T ss_pred cceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccC-CCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence 4567789999988876543 358888888665421 222 222335677 8999887654 4789999999876
No 376
>KOG2114|consensus
Probab=83.60 E-value=10 Score=24.98 Aligned_cols=70 Identities=14% Similarity=0.142 Sum_probs=44.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccC----CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRT----GTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
|+.+++.+.+-..+++|-.+|.|..+.-+. +....-....+++|+.+. ..++...+-......|..+.+.
T Consensus 127 p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~ 201 (933)
T KOG2114|consen 127 PASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLS 201 (933)
T ss_pred cceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEec
Confidence 567888888889999999999998875331 111111122356788877 5555443444455566666665
No 377
>PHA02713 hypothetical protein; Provisional
Probab=82.99 E-value=6.2 Score=24.36 Aligned_cols=34 Identities=3% Similarity=0.023 Sum_probs=24.1
Q ss_pred eCCCCeEEEEeCCC--CEEEEeCCCCeEEEeecCCC
Q psy13945 49 TADDGTLISSSLDQ--TISAWHTNDGSLKCNIQGPT 82 (86)
Q Consensus 49 ~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~ 82 (86)
..++..++.|+.++ .+..+|..+.+.......|+
T Consensus 510 ~~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~~ 545 (557)
T PHA02713 510 LHDNTIMMLHCYESYMLQDTFNVYTYEWNHICHQHS 545 (557)
T ss_pred EECCEEEEEeeecceeehhhcCcccccccchhhhcC
Confidence 34677888888777 67788888777665555454
No 378
>KOG2377|consensus
Probab=82.32 E-value=9.2 Score=23.52 Aligned_cols=29 Identities=17% Similarity=0.250 Sum_probs=26.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEcc
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLR 29 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~ 29 (86)
+|.++.|++|++.++....+.++-+++..
T Consensus 68 ~I~SIkFSlDnkilAVQR~~~~v~f~nf~ 96 (657)
T KOG2377|consen 68 EIKSIKFSLDNKILAVQRTSKTVDFCNFI 96 (657)
T ss_pred ceeEEEeccCcceEEEEecCceEEEEecC
Confidence 57899999999999999999999999874
No 379
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=82.04 E-value=8.6 Score=23.01 Aligned_cols=67 Identities=21% Similarity=0.268 Sum_probs=36.5
Q ss_pred EEECCCCCEEEE-EeCCCe--EEEEEccCCceEE-EEeCCccceEEEE-eCCCCeEEEEeC-CCC--EEEEeCCCCe
Q psy13945 5 IAVSSSGSWIAI-GQASGV--LTLLDLRTGTSLA-SWKGHEGEILQLV-TADDGTLISSSL-DQT--ISAWHTNDGS 73 (86)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~~--v~~~~~~~~~~~~-~~~~~~~~v~~~~-~~~~~~~~~~~~-~~~--i~~~~~~~~~ 73 (86)
-.|+|||+.++. .+..|. |.+++.+...... +....... .-. +|++..++-.+. ++. +.+.++.++.
T Consensus 287 Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~--~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 287 PSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNS--NPVWSPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred ccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCc--CccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 468999988664 444555 4444554444322 22222221 444 789998875553 333 5566665544
No 380
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=81.69 E-value=8.2 Score=22.53 Aligned_cols=71 Identities=20% Similarity=0.283 Sum_probs=49.4
Q ss_pred eEEEECCCCCEEEEEeC---CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCCCEEEEeCCCCeE
Q psy13945 3 RCIAVSSSGSWIAIGQA---SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~ 74 (86)
..+++++++..+..+.. +..+.+.|..+.+.......-..+ ..+. .|++..++ +-..++.+.+.+......
T Consensus 119 ~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v 194 (381)
T COG3391 119 VGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSV 194 (381)
T ss_pred ceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcce
Confidence 46788999977666555 688888898888877664433334 5666 88888554 445778888888655433
No 381
>PRK13616 lipoprotein LpqB; Provisional
Probab=81.29 E-value=11 Score=23.68 Aligned_cols=60 Identities=10% Similarity=-0.040 Sum_probs=32.7
Q ss_pred eEEEECCCCCEEEEEeCC-C-----------eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEE
Q psy13945 3 RCIAVSSSGSWIAIGQAS-G-----------VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISA 66 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~-~-----------~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~ 66 (86)
+...|+|||..+.+..+. . .+.+.++..++... .....|..+. +|++..++-.. ++++.+
T Consensus 400 t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 400 TRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 356789997766655432 2 22222332222211 2245688888 99988776443 355555
No 382
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=80.16 E-value=8.6 Score=21.80 Aligned_cols=39 Identities=15% Similarity=0.322 Sum_probs=31.0
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH 40 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 40 (86)
++++....+|.+|++...-.+|.+.+-.+++.+=.+.+.
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~ 184 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGK 184 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCC
Confidence 566777788999999998999999998888876555443
No 383
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=80.06 E-value=2.6 Score=15.71 Aligned_cols=19 Identities=32% Similarity=0.513 Sum_probs=13.5
Q ss_pred CCEEEEEeCCCeEEEEEcc
Q psy13945 11 GSWIAIGQASGVLTLLDLR 29 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~ 29 (86)
+..++.++.++.+..+|.+
T Consensus 21 ~g~vyv~~~dg~l~ald~~ 39 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAA 39 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT
T ss_pred CCEEEEEcCCCEEEEEeCC
Confidence 4567777788888888864
No 384
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=79.80 E-value=8.3 Score=22.46 Aligned_cols=38 Identities=29% Similarity=0.321 Sum_probs=24.6
Q ss_pred eeEEEECCCCC-EEEEE-eCCCeEEEEEccCCceEEEEeC
Q psy13945 2 IRCIAVSSSGS-WIAIG-QASGVLTLLDLRTGTSLASWKG 39 (86)
Q Consensus 2 i~~~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~~~~~~ 39 (86)
+.++..+.|.. ++++. ..++.+.++|..+++.+.....
T Consensus 291 ~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 291 IDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp ESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred cceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 44677777654 55544 4578999999999998777654
No 385
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=79.38 E-value=9.2 Score=21.68 Aligned_cols=38 Identities=26% Similarity=0.269 Sum_probs=32.6
Q ss_pred eEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 44 ILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 44 v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
+.++. ..++.+|++.-.-..|.+.+.++|+.+..+.+.
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~ 184 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGK 184 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCC
Confidence 56677 778899999999999999999999999888665
No 386
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=78.58 E-value=11 Score=22.30 Aligned_cols=65 Identities=25% Similarity=0.290 Sum_probs=41.2
Q ss_pred EEECCCCCEEEEEeCC----------C-eEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCC
Q psy13945 5 IAVSSSGSWIAIGQAS----------G-VLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~----------~-~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
++.+|.|..++...++ . .|.+|+. .|+.+..+.-..+.+.++..-+...++.-..++.++++|+.
T Consensus 34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDEELVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEcCCCceEEEEecCcccccccCCCCcEEEEECC-CCCEeEEEEECCCCEEEEEECCCCeEEEEEcCCEEEEEeCC
Confidence 4556656555554333 1 4777763 46666655544477888873235566677799999999985
No 387
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=78.47 E-value=9.2 Score=21.13 Aligned_cols=67 Identities=15% Similarity=0.228 Sum_probs=38.7
Q ss_pred eeEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCc-cceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHE-GEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
+++++|.|+. ++++..+..+.|..++. .++.+.+..-.. +-.=.+. -.++.++++.-.++.+.+.++
T Consensus 24 ~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~ 93 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI 93 (248)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred ccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence 6789999974 57777888888888885 477766553211 1112333 334444444445666766665
No 388
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=78.15 E-value=10 Score=21.61 Aligned_cols=66 Identities=17% Similarity=0.147 Sum_probs=36.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~ 68 (86)
+..+.-++||++++.+.......-||.-...-...-+....++..+. .+++.+.+.. ..+.++.-+
T Consensus 147 ~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 147 INDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred eEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 45667788999988887777777777432212222233457788888 7886665543 666666555
No 389
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=77.28 E-value=0.77 Score=15.47 Aligned_cols=8 Identities=25% Similarity=0.397 Sum_probs=5.7
Q ss_pred EECCCCCE
Q psy13945 6 AVSSSGSW 13 (86)
Q Consensus 6 ~~~~~~~~ 13 (86)
.|||+|++
T Consensus 7 ~FSp~Grl 14 (23)
T PF10584_consen 7 TFSPDGRL 14 (23)
T ss_dssp SBBTTSSB
T ss_pred eECCCCeE
Confidence 47888875
No 390
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.92 E-value=12 Score=21.60 Aligned_cols=54 Identities=22% Similarity=0.358 Sum_probs=32.8
Q ss_pred EECCCCCEEEEEeCC-----CeEEEEEccCC-ceEEEEeCCccceEEEE-eCCCCeEEEEe
Q psy13945 6 AVSSSGSWIAIGQAS-----GVLTLLDLRTG-TSLASWKGHEGEILQLV-TADDGTLISSS 59 (86)
Q Consensus 6 ~~~~~~~~~~~~~~~-----~~v~~~~~~~~-~~~~~~~~~~~~v~~~~-~~~~~~~~~~~ 59 (86)
.|++||++++..-+| |.|=+||...+ ..+..+..|.-.-..+. .+|++.++.+.
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 588999988865443 56888987633 22344444433334455 67777776543
No 391
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=76.66 E-value=3.7 Score=21.04 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=15.9
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEE
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLL 26 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~ 26 (86)
.+++||.||++.++.+. .|.|.
T Consensus 8 ~~l~WS~Dg~laV~t~~--~v~IL 29 (173)
T PF12657_consen 8 NALAWSEDGQLAVATGE--SVHIL 29 (173)
T ss_pred cCeeECCCCCEEEEcCC--eEEEE
Confidence 57999999998776654 44444
No 392
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=75.60 E-value=14 Score=21.65 Aligned_cols=69 Identities=10% Similarity=0.108 Sum_probs=44.2
Q ss_pred eEEEECCCCCEEEEEeCC---CeEEEEEccC--Cce--EEEEeCCccceEEEE-eCCCCeEEEEe-CCCCEEEEeCCC
Q psy13945 3 RCIAVSSSGSWIAIGQAS---GVLTLLDLRT--GTS--LASWKGHEGEILQLV-TADDGTLISSS-LDQTISAWHTND 71 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~---~~v~~~~~~~--~~~--~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~~~i~~~~~~~ 71 (86)
+-++|+++++.+.++..+ +.+-.|.++. +.. +.........-..++ .++++.++++. ..+.|.++-++.
T Consensus 43 tyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~ 120 (346)
T COG2706 43 TYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQA 120 (346)
T ss_pred ceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEccc
Confidence 457899999877765544 5666666653 443 222222233335677 88898887776 457888888764
No 393
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=75.49 E-value=16 Score=22.25 Aligned_cols=68 Identities=18% Similarity=0.251 Sum_probs=41.8
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEEEeCCcc--ceEEEE-eC--CCCeEEEEe---------CCCCEEEEeCCCCeEEEe
Q psy13945 12 SWIAIGQASGVLTLLDLRTGTSLASWKGHEG--EILQLV-TA--DDGTLISSS---------LDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 12 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~v~~~~-~~--~~~~~~~~~---------~~~~i~~~~~~~~~~~~~ 77 (86)
..++.++.++.+..+|..+++..=....... .-..+. .| .+..++.++ .++.+..+|..+|+.+..
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~ 190 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR 190 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence 5677777889999999999887644432211 001112 22 123343332 357788999999988876
Q ss_pred ec
Q psy13945 78 IQ 79 (86)
Q Consensus 78 ~~ 79 (86)
+.
T Consensus 191 ~~ 192 (488)
T cd00216 191 FY 192 (488)
T ss_pred ee
Confidence 64
No 394
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=74.76 E-value=5.3 Score=16.56 Aligned_cols=17 Identities=29% Similarity=0.425 Sum_probs=14.2
Q ss_pred eeEEEECCCCCEEEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQ 18 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~ 18 (86)
+..++..|||+.++.|.
T Consensus 3 ~~~~~~q~DGkIlv~G~ 19 (55)
T TIGR02608 3 AYAVAVQSDGKILVAGY 19 (55)
T ss_pred eEEEEECCCCcEEEEEE
Confidence 46788899999998885
No 395
>KOG1916|consensus
Probab=74.36 E-value=8.2 Score=25.83 Aligned_cols=23 Identities=17% Similarity=0.326 Sum_probs=20.6
Q ss_pred ECCCCCEEEEEeCCCeEEEEEcc
Q psy13945 7 VSSSGSWIAIGQASGVLTLLDLR 29 (86)
Q Consensus 7 ~~~~~~~~~~~~~~~~v~~~~~~ 29 (86)
.+|||..++.+..||.+..|.+.
T Consensus 243 lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 243 LSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred eCCCCcEEEEeecCCccceeeee
Confidence 68999999999999999988764
No 396
>KOG1900|consensus
Probab=74.36 E-value=27 Score=24.42 Aligned_cols=69 Identities=20% Similarity=0.249 Sum_probs=43.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEE--EEEccCCceEE--------------------EEe-CCccceEEEE-eCCCCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLT--LLDLRTGTSLA--------------------SWK-GHEGEILQLV-TADDGTLIS 57 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~--------------------~~~-~~~~~v~~~~-~~~~~~~~~ 57 (86)
|.|+....+|+.+++|.++ .++ +|....++--. .+. .+..+|..+. ..+...+.+
T Consensus 181 V~~I~~t~nGRIF~~G~dg-~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~ 259 (1311)
T KOG1900|consen 181 VNCITYTENGRIFFAGRDG-NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNILYV 259 (1311)
T ss_pred EEEEEeccCCcEEEeecCC-CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccceeee
Confidence 6788877788877776544 443 22222221100 111 2345777777 666777788
Q ss_pred EeCCCCEEEEeCCC
Q psy13945 58 SSLDQTISAWHTND 71 (86)
Q Consensus 58 ~~~~~~i~~~~~~~ 71 (86)
-+..+++.+|++..
T Consensus 260 lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 260 LSEKGTVSAYDIGG 273 (1311)
T ss_pred eccCceEEEEEccC
Confidence 89999999999875
No 397
>PRK10115 protease 2; Provisional
Probab=74.12 E-value=20 Score=22.97 Aligned_cols=68 Identities=13% Similarity=0.135 Sum_probs=37.9
Q ss_pred eeEEEECCCCCEEEEE-----eCCCeEEEEEccCCceEE-EEeCCccceEEEE-eCCCCeEE-EEeCC-----CCEEEEe
Q psy13945 2 IRCIAVSSSGSWIAIG-----QASGVLTLLDLRTGTSLA-SWKGHEGEILQLV-TADDGTLI-SSSLD-----QTISAWH 68 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~~-~~~~~~~~-~~~~~-----~~i~~~~ 68 (86)
+....++||+++++.+ ++...+++.|+.+++.+. .+..- . ..+. .+++..++ +...+ ..+..++
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--E-PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--c-eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 4567889999987743 333468888887776322 11111 1 3355 66665443 33321 3456666
Q ss_pred CCCC
Q psy13945 69 TNDG 72 (86)
Q Consensus 69 ~~~~ 72 (86)
+.++
T Consensus 206 lgt~ 209 (686)
T PRK10115 206 IGTP 209 (686)
T ss_pred CCCC
Confidence 6555
No 398
>KOG3630|consensus
Probab=73.13 E-value=28 Score=24.19 Aligned_cols=27 Identities=19% Similarity=0.247 Sum_probs=24.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEc
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDL 28 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~ 28 (86)
.++++|+|-|..++.|...|++..|..
T Consensus 201 ~Tav~WSprGKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 201 QTAVLWSPRGKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred eeeEEeccccceeeEecCCCeEEEeec
Confidence 579999999999999999999988863
No 399
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=70.89 E-value=14 Score=19.81 Aligned_cols=69 Identities=12% Similarity=0.082 Sum_probs=43.4
Q ss_pred eEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 3 RCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 3 ~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
.++.|.+ ++.++++....+.|..++..+++... +.... ...+. . +++.++++. . ..+.++|..+++...
T Consensus 3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~~-~-~~~~~~d~~~g~~~~ 74 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVAD-S-GGIAVVDPDTGKVTV 74 (246)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEEE-T-TCEEEEETTTTEEEE
T ss_pred cceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEEE-c-CceEEEecCCCcEEE
Confidence 4678887 77788887788999999987766533 22222 34445 5 565555444 3 444555888775443
No 400
>KOG2727|consensus
Probab=69.92 E-value=6.1 Score=26.33 Aligned_cols=75 Identities=17% Similarity=0.295 Sum_probs=47.6
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccc-eEEEE-e-------C---CCCeEE--EEeCCCCEEEEeC
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGE-ILQLV-T-------A---DDGTLI--SSSLDQTISAWHT 69 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-v~~~~-~-------~---~~~~~~--~~~~~~~i~~~~~ 69 (86)
.++.+|+|++.+..++-+.|.+.|+..+..+..++|+... +..+. . + .-..++ -+..-+-+.+|.+
T Consensus 326 ~lslSP~gtlAAVTD~lgRVlLlDta~~ivvr~wKGYRDAsc~fv~vkek~~~s~~~~sRvAlFLvIyAPRrgiLEVW~~ 405 (1244)
T KOG2727|consen 326 KLSLSPSGTLAAVTDSLGRVLLLDTAALIVVRLWKGYRDASCVFVEVKEKKGKSEPVKSRVALFLVIYAPRRGILEVWQM 405 (1244)
T ss_pred eeeeCCCccEEEEecccCcEEEEehhhhhHHHHhcccccceeEEEEcccccCCCccCcCceeEEEEEecccccHHHHHHh
Confidence 5788999999999999999999998776666666664432 22221 0 1 111222 2345566778888
Q ss_pred CCCeEEEee
Q psy13945 70 NDGSLKCNI 78 (86)
Q Consensus 70 ~~~~~~~~~ 78 (86)
++|..+..+
T Consensus 406 q~gpRV~Af 414 (1244)
T KOG2727|consen 406 QTGPRVLAF 414 (1244)
T ss_pred ccCCeEEEE
Confidence 887655544
No 401
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=69.85 E-value=18 Score=20.46 Aligned_cols=64 Identities=14% Similarity=0.077 Sum_probs=35.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCc-eEEEEeC-CccceEEEEeCCCCeEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGT-SLASWKG-HEGEILQLVTADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~ 69 (86)
|.+++-- ++.+ +.+. ...+.+|++...+ ....... ....+.++. ..+..++.+..-..+.++.+
T Consensus 91 V~ai~~~-~~~l-v~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~-~~~~~I~vgD~~~sv~~~~~ 156 (321)
T PF03178_consen 91 VTAICSF-NGRL-VVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLS-VFKNYILVGDAMKSVSLLRY 156 (321)
T ss_dssp EEEEEEE-TTEE-EEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEE-EETTEEEEEESSSSEEEEEE
T ss_pred ceEhhhh-CCEE-EEee-cCEEEEEEccCcccchhhheecceEEEEEEe-ccccEEEEEEcccCEEEEEE
Confidence 4455444 3443 3333 5788999987666 4332221 223455554 22447777777776666644
No 402
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=69.65 E-value=31 Score=23.19 Aligned_cols=30 Identities=17% Similarity=0.229 Sum_probs=20.0
Q ss_pred CeeEEEECCCCCEEEE-EeCCC-----eEEEEEccC
Q psy13945 1 LIRCIAVSSSGSWIAI-GQASG-----VLTLLDLRT 30 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~-~~~~~-----~v~~~~~~~ 30 (86)
+|.+.+|+|||+.++- .+-.+ .|++.++.+
T Consensus 351 ~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t 386 (912)
T TIGR02171 351 SVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNA 386 (912)
T ss_pred ceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhc
Confidence 3567789999988775 33333 477777764
No 403
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=69.50 E-value=28 Score=22.65 Aligned_cols=29 Identities=17% Similarity=0.247 Sum_probs=23.4
Q ss_pred eeEEEECCC---CCEEEEEeCCCeEEEEEccC
Q psy13945 2 IRCIAVSSS---GSWIAIGQASGVLTLLDLRT 30 (86)
Q Consensus 2 i~~~~~~~~---~~~~~~~~~~~~v~~~~~~~ 30 (86)
|..+.|+|. +..++.=..|.++++||+..
T Consensus 149 i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 149 IKQVRWHPWSESDSHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred EEEEEEcCCCCCCCeEEEEecCCEEEEEecCC
Confidence 678999986 46677777799999999864
No 404
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.29 E-value=21 Score=20.63 Aligned_cols=36 Identities=3% Similarity=-0.017 Sum_probs=28.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW 37 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 37 (86)
+++++|+|+.+.+++..+.....++-...|..+.+.
T Consensus 88 vS~LTynp~~rtLFav~n~p~~iVElt~~Gdlirti 123 (316)
T COG3204 88 VSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTI 123 (316)
T ss_pred ccceeeCCCcceEEEecCCCceEEEEecCCceEEEe
Confidence 578999999998888887777777766777776543
No 405
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=68.14 E-value=18 Score=19.74 Aligned_cols=46 Identities=20% Similarity=0.325 Sum_probs=30.4
Q ss_pred EEEEEeCCCeEEEEEccC--CceEEEEeCCccceEEEE-eCCCCeEEEEe
Q psy13945 13 WIAIGQASGVLTLLDLRT--GTSLASWKGHEGEILQLV-TADDGTLISSS 59 (86)
Q Consensus 13 ~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~ 59 (86)
.++.+.....|.+|++.. .+...++. .-+.|..+. +..|+.+++-=
T Consensus 30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 30 ALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred eEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEE
Confidence 333335567799999873 33344544 347788888 88899988753
No 406
>KOG3522|consensus
Probab=66.50 E-value=34 Score=22.85 Aligned_cols=58 Identities=12% Similarity=0.211 Sum_probs=32.0
Q ss_pred EEEEeCCCeEEEEEccCCceEEEEeCCc---cceEEEEeCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 14 IAIGQASGVLTLLDLRTGTSLASWKGHE---GEILQLVTADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 14 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
+.-++.+|.+.++...+.........|. ..|+++...+...+++-.....++.++..+
T Consensus 638 ~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~~~rlfhtet 698 (925)
T KOG3522|consen 638 FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGDEERLFHTET 698 (925)
T ss_pred eeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCCEEEEecccc
Confidence 4567778899998877655555555443 356666623333333333333444444433
No 407
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=66.45 E-value=12 Score=17.11 Aligned_cols=26 Identities=12% Similarity=0.239 Sum_probs=16.0
Q ss_pred eEEEECCCCCEEEEE-eCCCeEEEEEc
Q psy13945 3 RCIAVSSSGSWIAIG-QASGVLTLLDL 28 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~-~~~~~v~~~~~ 28 (86)
+++.++|+++.+..+ ...+.|.++..
T Consensus 57 NGI~~s~~~k~lyVa~~~~~~I~vy~~ 83 (86)
T PF01731_consen 57 NGIAISPDKKYLYVASSLAHSIHVYKR 83 (86)
T ss_pred ceEEEcCCCCEEEEEeccCCeEEEEEe
Confidence 467778877665544 33466666654
No 408
>KOG1008|consensus
Probab=66.35 E-value=1.3 Score=27.77 Aligned_cols=63 Identities=14% Similarity=0.218 Sum_probs=38.9
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEe
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWH 68 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~ 68 (86)
.++|..+.+++.+|.....+.++|++-..... ....++.+..+. .| .+..+ +...++.+.+||
T Consensus 159 s~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~-~svnTk~vqG~tVdp~~~nY~-cs~~dg~iAiwD 223 (783)
T KOG1008|consen 159 SVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSV-SSVNTKYVQGITVDPFSPNYF-CSNSDGDIAIWD 223 (783)
T ss_pred ccccccCcchhhcccccchhhhhhhhhhhhhh-hhhhhhhcccceecCCCCCce-eccccCceeecc
Confidence 56677777888888888888888876222111 111222333444 55 44444 445599999999
No 409
>KOG3616|consensus
Probab=66.18 E-value=20 Score=23.83 Aligned_cols=30 Identities=7% Similarity=0.034 Sum_probs=23.1
Q ss_pred cceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 42 GEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 42 ~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
..+.++. +|.++.++.+..|+.+++++...
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~ 45 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIP 45 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecc
Confidence 4456677 78888888888888888887643
No 410
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=65.29 E-value=23 Score=19.99 Aligned_cols=76 Identities=16% Similarity=-0.005 Sum_probs=43.0
Q ss_pred EEEECCCCCEEEEEeCCC--eEEEEEccCCceEEEEeCCc-cceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 4 CIAVSSSGSWIAIGQASG--VLTLLDLRTGTSLASWKGHE-GEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
++.|..++.++-+.+.-| .++.+|..+++......-.. ..--.+...+...+.-.-.++...+||..+-+.+.++.
T Consensus 49 GL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~~~ 127 (264)
T PF05096_consen 49 GLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGTFP 127 (264)
T ss_dssp EEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred cEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceEEEEEe
Confidence 455656677777777766 58888888888754433211 11111111123333444556677778877776666654
No 411
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=65.17 E-value=31 Score=21.45 Aligned_cols=68 Identities=18% Similarity=0.183 Sum_probs=41.1
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEEEeCC-ccceEEEE-eC---CCCeEEEEe-----CCCCEEEEeCCCCeEEEeec
Q psy13945 12 SWIAIGQASGVLTLLDLRTGTSLASWKGH-EGEILQLV-TA---DDGTLISSS-----LDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 12 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~v~~~~-~~---~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~ 79 (86)
..++.+..++.+.-+|..+++.+=..... ...-..+. .| ++..++... .++.+..+|.++|+.+..+.
T Consensus 121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 45666777889999999898875333211 11111122 22 343343322 26789999999999887654
No 412
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=62.19 E-value=17 Score=17.55 Aligned_cols=59 Identities=12% Similarity=0.216 Sum_probs=34.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeC-CccceEEEE-e-CC---CCeEEEEeCCCCEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKG-HEGEILQLV-T-AD---DGTLISSSLDQTIS 65 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~-~-~~---~~~~~~~~~~~~i~ 65 (86)
|.++.-... ..++.+-.+|+|-+|+-... .++. .+..+.++. . .+ ...+++|..++.+-
T Consensus 45 v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~R----lWRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 45 VTSLCSLGG-GRFAYALANGTVGVYDRSQR----LWRIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eEEEEEcCC-CEEEEEecCCEEEEEeCcce----eeeeccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 345554444 56788888999999975322 2221 234466665 3 22 23577887777764
No 413
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=61.62 E-value=43 Score=21.96 Aligned_cols=68 Identities=10% Similarity=0.157 Sum_probs=40.7
Q ss_pred eeEEEEC--CCCCEEEEEeCCCeEEEEEccCC--ce-EEEEeCCccceEEEE----eCC--CC-eEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVS--SSGSWIAIGQASGVLTLLDLRTG--TS-LASWKGHEGEILQLV----TAD--DG-TLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~-~~~~~~~~~~v~~~~----~~~--~~-~~~~~~~~~~i~~~~~ 69 (86)
+.+++++ ...++|+.+++...|.|+-.... +. ...-..+...|-++. ..+ +. ++++++-.+.+-+|++
T Consensus 166 aWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 166 AWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred eeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 4677887 77889999999988887754321 11 111011233343443 222 32 6677888888888776
No 414
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=61.43 E-value=26 Score=19.44 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=21.7
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEE
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLAS 36 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~ 36 (86)
++++.++| .+++++.++....+..+| ..++....
T Consensus 173 ~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~ 207 (248)
T PF06977_consen 173 LSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSS 207 (248)
T ss_dssp --EEEEETTTTEEEEEETTTTEEEEE--TT--EEEE
T ss_pred ccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEE
Confidence 35677877 457888888889999988 55665443
No 415
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=60.34 E-value=21 Score=17.96 Aligned_cols=68 Identities=12% Similarity=0.110 Sum_probs=43.1
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCce-------EEEEeCCccceEEEE-eC----CCCeEEEEeCCCCEEEEeCCCC
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTS-------LASWKGHEGEILQLV-TA----DDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~v~~~~-~~----~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
-.|....+.++++...+.|.+.+...... ...+..-+..|.++. -+ +..-++.-+....+..||....
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N 83 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENN 83 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccC
Confidence 35666667889999999999998653321 122333456777776 32 2344555666777888887644
No 416
>KOG2467|consensus
Probab=59.13 E-value=12 Score=22.32 Aligned_cols=21 Identities=10% Similarity=0.094 Sum_probs=18.2
Q ss_pred CCCeEEEEeCCCCEEEEeCCC
Q psy13945 51 DDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 51 ~~~~~~~~~~~~~i~~~~~~~ 71 (86)
-+-.+++++.|+.+-+||++.
T Consensus 340 ~Gy~lvtgGTDnHlvLvDLr~ 360 (477)
T KOG2467|consen 340 RGYKLVTGGTDNHLVLVDLRP 360 (477)
T ss_pred cCceEecCCccceEEEEeccc
Confidence 366789999999999999974
No 417
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=58.63 E-value=23 Score=17.81 Aligned_cols=65 Identities=9% Similarity=0.088 Sum_probs=47.3
Q ss_pred EEEEEeCCCeEEEEEccCCceEEEEeC-CccceEEE----------E--eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 13 WIAIGQASGVLTLLDLRTGTSLASWKG-HEGEILQL----------V--TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 13 ~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~v~~~----------~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+.+.+..++.+.+++..+++.+..+.. ..+.+..+ . ..+....+....|+.+.+-|..++..+..
T Consensus 43 l~f~d~~~G~v~V~~~~~G~~va~~~~g~~GFvrgvlR~l~R~R~~~gv~~~~Pf~L~r~~dGrltL~Dp~Tg~~i~L 120 (135)
T TIGR03054 43 LVFEDRPDGAVAVVETPDGRLVAILEPGQNGFVRVMLRGLARARARAGVAAEPPFRLTRYDNGRLTLTDPATGWSIEL 120 (135)
T ss_pred EEEecCCCCeEEEEECCCCCEEEEecCCCCchhhHhHHHHHHHHHHcCCCCCCCEEEEEEeCCcEEEEcCCCCcEEEE
Confidence 345667789999999999999888754 33443321 1 34566778899999999999998876643
No 418
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=57.91 E-value=42 Score=20.66 Aligned_cols=49 Identities=22% Similarity=0.251 Sum_probs=27.1
Q ss_pred CCeEEEEEccCCceEEEEeC-Ccc----ceEEEEeCC-CCeEEEEeCCCCEEEEe
Q psy13945 20 SGVLTLLDLRTGTSLASWKG-HEG----EILQLVTAD-DGTLISSSLDQTISAWH 68 (86)
Q Consensus 20 ~~~v~~~~~~~~~~~~~~~~-~~~----~v~~~~~~~-~~~~~~~~~~~~i~~~~ 68 (86)
..++.+||+.+++.++++.- ..+ +|..+..|+ ...++.+...+.|-.|.
T Consensus 221 G~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~ 275 (461)
T PF05694_consen 221 GHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFY 275 (461)
T ss_dssp --EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEE
T ss_pred cCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEE
Confidence 45799999999999888753 222 223222344 34566666666665554
No 419
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=54.62 E-value=13 Score=13.89 Aligned_cols=20 Identities=35% Similarity=0.413 Sum_probs=13.8
Q ss_pred eeEEEECCCCCEEEEEeCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASG 21 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~ 21 (86)
...+++.++|+..++|..++
T Consensus 15 ~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 15 GNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred EEEEEECCCCCEEEEEeecC
Confidence 35677788888777776543
No 420
>KOG4460|consensus
Probab=53.75 E-value=57 Score=20.87 Aligned_cols=72 Identities=17% Similarity=0.233 Sum_probs=44.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEc---------cCCceEEEEe--CCc-------c--ceEEEE-eCC---CCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDL---------RTGTSLASWK--GHE-------G--EILQLV-TAD---DGTLIS 57 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~---------~~~~~~~~~~--~~~-------~--~v~~~~-~~~---~~~~~~ 57 (86)
|..+..++.|..++-.+.+|.+.++-. +.++....++ +-. . .+...+ +|+ ...++.
T Consensus 106 V~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~i 185 (741)
T KOG4460|consen 106 VYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVL 185 (741)
T ss_pred EEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEE
Confidence 456778899999888888888776541 2333322211 111 1 122334 564 356777
Q ss_pred EeCCCCEEEEeCCCCe
Q psy13945 58 SSLDQTISAWHTNDGS 73 (86)
Q Consensus 58 ~~~~~~i~~~~~~~~~ 73 (86)
-..|..+++|+.....
T Consensus 186 L~sdnviRiy~lS~~t 201 (741)
T KOG4460|consen 186 LTSDNVIRIYSLSEPT 201 (741)
T ss_pred EecCcEEEEEecCCcc
Confidence 8899999999986544
No 421
>PRK13616 lipoprotein LpqB; Provisional
Probab=52.86 E-value=58 Score=20.76 Aligned_cols=23 Identities=26% Similarity=0.271 Sum_probs=17.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTL 25 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~ 25 (86)
|..+.|+|||..++... ++.|.+
T Consensus 450 Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 450 ISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred cCeEEECCCCCEEEEEE-CCEEEE
Confidence 67899999999877655 467766
No 422
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=52.25 E-value=49 Score=19.70 Aligned_cols=29 Identities=24% Similarity=0.280 Sum_probs=23.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRT 30 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 30 (86)
|.+++..+..+.+++...++.+.+|++..
T Consensus 192 I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 192 IVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred eeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 56777777788999999999999999874
No 423
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=50.09 E-value=17 Score=17.73 Aligned_cols=22 Identities=32% Similarity=0.591 Sum_probs=14.8
Q ss_pred EECCCCCEEEEEeCCCeEEEEE
Q psy13945 6 AVSSSGSWIAIGQASGVLTLLD 27 (86)
Q Consensus 6 ~~~~~~~~~~~~~~~~~v~~~~ 27 (86)
.|||||+.+-..-+|..+.-.|
T Consensus 74 vfSpDG~~lSFTYNDhVmhe~d 95 (122)
T PF12566_consen 74 VFSPDGSWLSFTYNDHVMHELD 95 (122)
T ss_pred EECCCCCEEEEEecchhhcccc
Confidence 5788888877777776655433
No 424
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=50.00 E-value=49 Score=19.07 Aligned_cols=60 Identities=17% Similarity=0.220 Sum_probs=29.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEc-cCCceEEE----EeCCccceEEEE-eCCCCeEEEEeCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDL-RTGTSLAS----WKGHEGEILQLV-TADDGTLISSSLD 61 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~----~~~~~~~v~~~~-~~~~~~~~~~~~~ 61 (86)
.|..+.|.+++.+...+ +.+.++.=+. ...+.... .......+..++ .++....+.++..
T Consensus 188 riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G 253 (302)
T PF14870_consen 188 RIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSG 253 (302)
T ss_dssp -EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred eehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence 36789999998876644 7888887762 22222111 111223356667 5566666554433
No 425
>KOG0183|consensus
Probab=48.43 E-value=13 Score=20.25 Aligned_cols=11 Identities=18% Similarity=0.392 Sum_probs=8.4
Q ss_pred EECCCCCEEEE
Q psy13945 6 AVSSSGSWIAI 16 (86)
Q Consensus 6 ~~~~~~~~~~~ 16 (86)
-|||||++|-.
T Consensus 10 vFSPDGhL~QV 20 (249)
T KOG0183|consen 10 VFSPDGHLFQV 20 (249)
T ss_pred EECCCCCEEee
Confidence 58999988653
No 426
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=48.32 E-value=63 Score=19.80 Aligned_cols=27 Identities=19% Similarity=0.128 Sum_probs=16.3
Q ss_pred CCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 52 DGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 52 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|..+... .+..|.+||+.+++.+..+.
T Consensus 117 G~LL~~~-~~~~i~~yDw~~~~~i~~i~ 143 (443)
T PF04053_consen 117 GNLLGVK-SSDFICFYDWETGKLIRRID 143 (443)
T ss_dssp SSSEEEE-ETTEEEEE-TTT--EEEEES
T ss_pred CcEEEEE-CCCCEEEEEhhHcceeeEEe
Confidence 4444444 33489999999998887775
No 427
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=45.55 E-value=72 Score=19.71 Aligned_cols=55 Identities=11% Similarity=0.115 Sum_probs=33.9
Q ss_pred CCEEEEEeCCCeEEEEEccCC--ce---EEEEeCCccceEEEE-eCCC-CeEEEEeCCCCEE
Q psy13945 11 GSWIAIGQASGVLTLLDLRTG--TS---LASWKGHEGEILQLV-TADD-GTLISSSLDQTIS 65 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~--~~---~~~~~~~~~~v~~~~-~~~~-~~~~~~~~~~~i~ 65 (86)
+.+++.+=..+.|....+... ++ ...+.....++..+. .|++ .+.+....++.++
T Consensus 369 g~llv~~L~~~~l~r~~l~~~~~~v~~~~~~~~~~~~RiRdv~~~pDg~~iy~~td~~g~~~ 430 (454)
T TIGR03606 369 NSLLIPSLKRGVIYRIKLDPDYSTVYGDAVPMFKTNNRYRDVIASPDGNVLYVATDNFGNVQ 430 (454)
T ss_pred CCEEEEEcCCCeEEEEEecCCcceecceeEEeecCCCeeEEEEECCCCCEEEEEEcCCCccc
Confidence 567777777777777776533 12 122322257999999 9997 5555555555443
No 428
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=45.35 E-value=93 Score=20.91 Aligned_cols=60 Identities=15% Similarity=0.285 Sum_probs=42.5
Q ss_pred CEEEEE-eCCCeEEEEEccCCceEEEEeCCccc-eEEEE-eC-----CCCeEEEEeCCCCEEEEeCCC
Q psy13945 12 SWIAIG-QASGVLTLLDLRTGTSLASWKGHEGE-ILQLV-TA-----DDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 12 ~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~-v~~~~-~~-----~~~~~~~~~~~~~i~~~~~~~ 71 (86)
.+++.. .....|+-.|+..|+++..+..+... |..+. .. .....+.|-.+..+..||.|.
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~ 561 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRL 561 (794)
T ss_pred ceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCC
Confidence 444433 34577888899999999999876643 66654 21 244567788899999999985
No 429
>PRK14751 tetracycline resistance determinant leader peptide; Provisional
Probab=45.27 E-value=17 Score=12.47 Aligned_cols=10 Identities=30% Similarity=0.644 Sum_probs=7.1
Q ss_pred CCCCEEEEeC
Q psy13945 60 LDQTISAWHT 69 (86)
Q Consensus 60 ~~~~i~~~~~ 69 (86)
+|..|.-||.
T Consensus 13 sdksi~hwdf 22 (28)
T PRK14751 13 SDKSIYHWDF 22 (28)
T ss_pred CcCceeeeee
Confidence 5667778875
No 430
>PRK13684 Ycf48-like protein; Provisional
Probab=45.07 E-value=61 Score=18.77 Aligned_cols=22 Identities=23% Similarity=0.510 Sum_probs=13.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLT 24 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~ 24 (86)
+..+.+.+++.+++.+. .|.+.
T Consensus 175 ~~~i~~~~~g~~v~~g~-~G~i~ 196 (334)
T PRK13684 175 VRNLRRSPDGKYVAVSS-RGNFY 196 (334)
T ss_pred EEEEEECCCCeEEEEeC-CceEE
Confidence 45677788777666554 34433
No 431
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=43.34 E-value=75 Score=19.29 Aligned_cols=18 Identities=6% Similarity=0.110 Sum_probs=12.8
Q ss_pred eEEEECCCCCEEEEEeCC
Q psy13945 3 RCIAVSSSGSWIAIGQAS 20 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~ 20 (86)
..+.|+|||.++++.+..
T Consensus 180 ~~l~f~pDG~Lyvs~G~~ 197 (399)
T COG2133 180 GRLVFGPDGKLYVTTGSN 197 (399)
T ss_pred ccEEECCCCcEEEEeCCC
Confidence 357889999877765543
No 432
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=43.13 E-value=20 Score=12.54 Aligned_cols=23 Identities=35% Similarity=0.784 Sum_probs=14.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLL 26 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~ 26 (86)
|.+++..+ .+++.+...+.+++|
T Consensus 4 i~aia~g~--~~vavaTS~~~lRif 26 (27)
T PF12341_consen 4 IEAIAAGD--SWVAVATSAGYLRIF 26 (27)
T ss_pred EEEEEccC--CEEEEEeCCCeEEec
Confidence 45555443 466666667777776
No 433
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B.
Probab=42.72 E-value=24 Score=13.47 Aligned_cols=23 Identities=22% Similarity=0.309 Sum_probs=10.4
Q ss_pred CCCCEEEEEeCCC------eEEEEEccCC
Q psy13945 9 SSGSWIAIGQASG------VLTLLDLRTG 31 (86)
Q Consensus 9 ~~~~~~~~~~~~~------~v~~~~~~~~ 31 (86)
.++..++.|+.+. .+.++|+.+.
T Consensus 11 ~~~~i~v~GG~~~~~~~~~d~~~~d~~~~ 39 (49)
T PF13418_consen 11 GDNSIYVFGGRDSSGSPLNDLWIFDIETN 39 (49)
T ss_dssp -TTEEEEE--EEE-TEE---EEEEETTTT
T ss_pred eCCeEEEECCCCCCCcccCCEEEEECCCC
Confidence 4456666655443 2455665544
No 434
>PF15644 Tox-PL: Papain fold toxin 1; PDB: 3B21_A.
Probab=39.32 E-value=47 Score=15.73 Aligned_cols=22 Identities=23% Similarity=0.463 Sum_probs=13.3
Q ss_pred CCEEEEEeCCCeEEEEEccCCc
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGT 32 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~ 32 (86)
++.+.....+|.|.++|.++++
T Consensus 88 gHa~nvv~~~G~i~~~D~Q~G~ 109 (111)
T PF15644_consen 88 GHAFNVVNQNGKIVFLDPQSGK 109 (111)
T ss_dssp TTEEEEEEE-SSEEEEBTTTTB
T ss_pred ceEEEEEeCCCeEEEEeCCCCC
Confidence 4555555667777777766554
No 435
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=39.22 E-value=97 Score=19.37 Aligned_cols=70 Identities=17% Similarity=0.096 Sum_probs=38.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCC---ceEEEEeCCccceEEEE-eCCCCeEEEEeCCC--CEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTG---TSLASWKGHEGEILQLV-TADDGTLISSSLDQ--TISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~--~i~~~~~~~~ 72 (86)
|.++.|..|--++++-...-.+.+.|++.. +++..++...- ...+. -.++..+-.|..++ .|.++|+.+.
T Consensus 430 IYAvRf~gdv~yiVTfrqtDPlfviDlsNPenPkvlGeLKIPGf-S~YLHpigen~~lGvG~~~g~vKiSLFdiSdl 505 (603)
T COG4880 430 IYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENPKVLGELKIPGF-SEYLHPIGENRLLGVGAYQGGVKISLFDISDL 505 (603)
T ss_pred EEEEEEeCceEEEEEEeccCceEEEEcCCCCCCceeEEEecCCc-hhhccccCCCcEEEeecccCCceEEEEeccCC
Confidence 456666666666666666666777787643 34444443321 11122 12455555566665 4567887653
No 436
>KOG4441|consensus
Probab=38.13 E-value=1.1e+02 Score=19.55 Aligned_cols=63 Identities=13% Similarity=0.169 Sum_probs=32.9
Q ss_pred CCCEEEEEeCC-C-----eEEEEEccCCceEEEEeCCccceEE--EEeCCCCeEEEEeCCC-----CEEEEeCCCCe
Q psy13945 10 SGSWIAIGQAS-G-----VLTLLDLRTGTSLASWKGHEGEILQ--LVTADDGTLISSSLDQ-----TISAWHTNDGS 73 (86)
Q Consensus 10 ~~~~~~~~~~~-~-----~v~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~~~~-----~i~~~~~~~~~ 73 (86)
++...++|+.+ + .+..||..+.+-.. .......-.. +...++..++.|+.|+ .+..||..+.+
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~-~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~ 407 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP-VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNK 407 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceec-cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCc
Confidence 34667777777 2 35566665444222 1111111111 1144677788888775 46677766543
No 437
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=38.08 E-value=82 Score=18.23 Aligned_cols=55 Identities=20% Similarity=0.269 Sum_probs=33.9
Q ss_pred CCCEEEEEeCCCeEEEEEccCCc-eE--EEEe-CCccceEEEE-eCCCCeEEEEeCCCCE
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGT-SL--ASWK-GHEGEILQLV-TADDGTLISSSLDQTI 64 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~-~~--~~~~-~~~~~v~~~~-~~~~~~~~~~~~~~~i 64 (86)
.|.+++..-..+.|....+.... .. ..+. ....++..+. .|++.++++-..++.|
T Consensus 270 ~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~i 329 (331)
T PF07995_consen 270 RGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKI 329 (331)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTE
T ss_pred cCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeE
Confidence 44566666666777777766442 21 2222 2334788888 8999988887777776
No 438
>PF02870 Methyltransf_1N: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; InterPro: IPR008332 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources []. This group of proteins are characterised by having an N-terminal ribonuclease-like domain associated with 6-O-methylguanine DNA methyltransferase activity (IPR001497 from INTERPRO).; GO: 0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A.
Probab=36.79 E-value=42 Score=14.46 Aligned_cols=20 Identities=15% Similarity=0.170 Sum_probs=14.6
Q ss_pred ECCCCCEEEEEeCCCeEEEE
Q psy13945 7 VSSSGSWIAIGQASGVLTLL 26 (86)
Q Consensus 7 ~~~~~~~~~~~~~~~~v~~~ 26 (86)
-+|-|.++++++..|-..++
T Consensus 8 ~sPlG~l~l~a~e~gL~~i~ 27 (77)
T PF02870_consen 8 DSPLGPLLLAASEKGLCGID 27 (77)
T ss_dssp EETTEEEEEEEETTCEEEEE
T ss_pred cCCCeEEEEEEECCeEEEEE
Confidence 36778888888888765555
No 439
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=36.05 E-value=1.3e+02 Score=19.96 Aligned_cols=27 Identities=19% Similarity=0.158 Sum_probs=22.8
Q ss_pred eeEEEECCC-CCEEEEEeCCCeEEEEEc
Q psy13945 2 IRCIAVSSS-GSWIAIGQASGVLTLLDL 28 (86)
Q Consensus 2 i~~~~~~~~-~~~~~~~~~~~~v~~~~~ 28 (86)
...++|+|. ...|+..+..|.-.||++
T Consensus 148 ~aDv~FnP~~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 148 HADVAFNPWDQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred cceEEeccCccceEEEEeccCcEEEEEe
Confidence 357899984 467999999999999999
No 440
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=34.92 E-value=95 Score=18.00 Aligned_cols=17 Identities=24% Similarity=0.354 Sum_probs=7.4
Q ss_pred ECCCCCEEEEEeCCCeE
Q psy13945 7 VSSSGSWIAIGQASGVL 23 (86)
Q Consensus 7 ~~~~~~~~~~~~~~~~v 23 (86)
|+.+|+++++....|.+
T Consensus 266 f~r~G~LiA~~~QEG~~ 282 (289)
T COG1946 266 FDRDGQLIASVVQEGLI 282 (289)
T ss_pred EcCCCCEEEEEeeeEEE
Confidence 34444444444444333
No 441
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=34.89 E-value=1.4e+02 Score=19.88 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=25.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA 35 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 35 (86)
|.++....-+..++....||.|.++|..+.+.+.
T Consensus 262 V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~ 295 (753)
T PF11635_consen 262 VVSITSPELDIVVAFAFSDGSIEFRDRNTMKELN 295 (753)
T ss_pred EEEEEecccCcEEEEEEcCCeEEEEecCcchhhc
Confidence 4556666667788889999999999987765543
No 442
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=34.83 E-value=1.1e+02 Score=18.74 Aligned_cols=56 Identities=11% Similarity=0.201 Sum_probs=33.8
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEEEeC--CccceEEEEeCCCCeEEEEeCCCCEEEEeC
Q psy13945 12 SWIAIGQASGVLTLLDLRTGTSLASWKG--HEGEILQLVTADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 12 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~ 69 (86)
..++..+.||.+.+++.+.-.....+.. ..+++.. .+..+.+++++.+..+..+.+
T Consensus 146 ~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y--~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 146 DFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCY--CPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred eEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEE--eecCCEEEEecCceeEEEecH
Confidence 5688889999999999654332222222 1222221 445666777777777766654
No 443
>KOG1983|consensus
Probab=34.81 E-value=83 Score=21.66 Aligned_cols=26 Identities=23% Similarity=0.360 Sum_probs=22.1
Q ss_pred CCCCCEEEEEeCCCeEEEEEccCCce
Q psy13945 8 SSSGSWIAIGQASGVLTLLDLRTGTS 33 (86)
Q Consensus 8 ~~~~~~~~~~~~~~~v~~~~~~~~~~ 33 (86)
++++..++++..|+.+.+||...+..
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVSSGKL 268 (993)
T ss_pred ccCCceEEEEEecCCEEeeecCCCce
Confidence 46788999999999999999887643
No 444
>PF09081 DUF1921: Domain of unknown function (DUF1921); InterPro: IPR015165 This domain, which is found in a set of prokaryotic amylases, has no known function []. ; PDB: 1QI5_A 1JDC_A 2AMG_A 1QPK_A 1JDD_A 1QI4_A 1JDA_A 1GCY_A 1QI3_A.
Probab=33.06 E-value=43 Score=13.51 Aligned_cols=10 Identities=10% Similarity=0.478 Sum_probs=7.1
Q ss_pred eCCCCEEEEe
Q psy13945 59 SLDQTISAWH 68 (86)
Q Consensus 59 ~~~~~i~~~~ 68 (86)
-+++.+++|.
T Consensus 42 ~dnG~vRiWr 51 (51)
T PF09081_consen 42 EDNGQVRIWR 51 (51)
T ss_dssp ETTTTEEEEE
T ss_pred ccCCcEEeeC
Confidence 3567888884
No 445
>KOG2377|consensus
Probab=32.52 E-value=1.3e+02 Score=19.04 Aligned_cols=35 Identities=17% Similarity=0.127 Sum_probs=28.9
Q ss_pred EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 36 SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 36 ~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
-.....++|.++. ++|...++....+..+.+++..
T Consensus 61 fdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~ 96 (657)
T KOG2377|consen 61 FDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFI 96 (657)
T ss_pred eeecCCCceeEEEeccCcceEEEEecCceEEEEecC
Confidence 3345667999999 9999999999999999888763
No 446
>KOG4305|consensus
Probab=32.36 E-value=1.2e+02 Score=21.21 Aligned_cols=27 Identities=26% Similarity=0.168 Sum_probs=21.0
Q ss_pred EEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 55 LISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 55 ~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
.+-+-.+..|.+||+++++.++.+.++
T Consensus 964 yiia~~~~fIeI~~~~t~eli~~i~~~ 990 (1029)
T KOG4305|consen 964 YIIAFGDNFIEIRDLETGELIQIILGQ 990 (1029)
T ss_pred eEEEecCceEEEEecccceeeEEeecc
Confidence 344567889999999999988876654
No 447
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=32.34 E-value=1.5e+02 Score=19.44 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=21.7
Q ss_pred CccceEEEE-eCCCCeEEEEeCC-CCEEEEeCCC
Q psy13945 40 HEGEILQLV-TADDGTLISSSLD-QTISAWHTND 71 (86)
Q Consensus 40 ~~~~v~~~~-~~~~~~~~~~~~~-~~i~~~~~~~ 71 (86)
..+.|.|.. ..||+.++.+-.+ =.-++||-.+
T Consensus 154 ~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 154 TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred CCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 456788888 7888877655444 4567898543
No 448
>COG4831 Roadblock/LC7 domain [Function unknown]
Probab=31.46 E-value=43 Score=15.83 Aligned_cols=11 Identities=18% Similarity=0.353 Sum_probs=7.7
Q ss_pred EECCCCCEEEE
Q psy13945 6 AVSSSGSWIAI 16 (86)
Q Consensus 6 ~~~~~~~~~~~ 16 (86)
.|+|||+++.-
T Consensus 19 efs~DGkLv~Y 29 (109)
T COG4831 19 EFSPDGKLVEY 29 (109)
T ss_pred eeCCCCceEEe
Confidence 47888887654
No 449
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=31.16 E-value=1.3e+02 Score=18.57 Aligned_cols=39 Identities=21% Similarity=0.292 Sum_probs=26.7
Q ss_pred eEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeEEEeecCCC
Q psy13945 44 ILQLV-TA-DDGTLISSSLDQTISAWHTNDGSLKCNIQGPT 82 (86)
Q Consensus 44 v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 82 (86)
+.++. .+ +...+++.-.-..|...|.++++....+..+.
T Consensus 273 ~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~ 313 (477)
T PF05935_consen 273 INSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPG 313 (477)
T ss_dssp EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-ST
T ss_pred cCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCC
Confidence 56777 66 56677777777789889988999888887654
No 450
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=31.08 E-value=1.1e+02 Score=17.80 Aligned_cols=66 Identities=29% Similarity=0.330 Sum_probs=39.3
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-e--CCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-T--ADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|+ ++.++.++.+..+|..+++..-...... . ..+. . .....+...+.++.+...+..++......
T Consensus 111 ~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~-~-~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~ 179 (370)
T COG1520 111 DGK-IYVGSWDGKLYALDASTGTLVWSRNVGG-S-PYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTY 179 (370)
T ss_pred CCe-EEEecccceEEEEECCCCcEEEEEecCC-C-eEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEE
Confidence 455 6667778888888887787755544333 1 2222 1 12333333336788888887777776554
No 451
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=30.67 E-value=1e+02 Score=17.08 Aligned_cols=59 Identities=15% Similarity=0.243 Sum_probs=32.9
Q ss_pred CeeEEEECCCCCEEEEEe---CCCeEEEEEcc---CC--ceE-E--EE-eCCccceEEEE-eCCCCeEEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQ---ASGVLTLLDLR---TG--TSL-A--SW-KGHEGEILQLV-TADDGTLISSS 59 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~---~~~~v~~~~~~---~~--~~~-~--~~-~~~~~~v~~~~-~~~~~~~~~~~ 59 (86)
.|..+.++|||..++... .++.+.+--+. .+ ..+ . .. ......+..+. ..+..+++.+.
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~ 184 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGR 184 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeC
Confidence 378999999998766544 34666665432 23 111 1 11 12234566777 66666655444
No 452
>KOG2247|consensus
Probab=29.89 E-value=63 Score=20.44 Aligned_cols=51 Identities=20% Similarity=0.259 Sum_probs=30.7
Q ss_pred EECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE
Q psy13945 6 AVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI 56 (86)
Q Consensus 6 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~ 56 (86)
.|++.....+.+...+.+.+++-.+...+-....|..++.++. .+++..+.
T Consensus 124 ~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil 175 (615)
T KOG2247|consen 124 AWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVIL 175 (615)
T ss_pred hhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeee
Confidence 4566666666677778888887655444433333556666666 55554443
No 453
>PF00843 Arena_nucleocap: Arenavirus nucleocapsid protein; InterPro: IPR000229 Arenaviruses are single stranded RNA viruses. The arenavirus S RNAs that have been characterised include conserved terminal sequences, an ambisense arrangement of the coding regions for the precursor glycoprotein (GPC) and nucleocapsid (N) proteins and an intergenic region capable of forming a base-paired "hairpin" structure. The mature glycoproteins that result are G1 and G2 and the N protein []. This family represents the nucleocapsid protein that encapsulates the viral ssRNA [].; GO: 0019013 viral nucleocapsid; PDB: 3MX5_A 3MX2_C 3MWT_C 3Q7C_A 3MWP_B 3Q7B_A 3T5Q_E 3T5N_A 3R3L_B.
Probab=29.69 E-value=22 Score=21.74 Aligned_cols=17 Identities=24% Similarity=0.503 Sum_probs=8.9
Q ss_pred EeCCCeEEEEEccCCce
Q psy13945 17 GQASGVLTLLDLRTGTS 33 (86)
Q Consensus 17 ~~~~~~v~~~~~~~~~~ 33 (86)
+..+|.+++||++..+.
T Consensus 148 ~~~~GVVrvWDvkd~~l 164 (533)
T PF00843_consen 148 GGRNGVVRVWDVKDPSL 164 (533)
T ss_dssp --SSSEE-SEE-S-GGG
T ss_pred CCCCCeEEEEecCCHHH
Confidence 45678889998876544
No 454
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=29.55 E-value=83 Score=15.70 Aligned_cols=24 Identities=21% Similarity=0.368 Sum_probs=17.3
Q ss_pred EeCCCeEEEEEccCCceEEEEeCC
Q psy13945 17 GQASGVLTLLDLRTGTSLASWKGH 40 (86)
Q Consensus 17 ~~~~~~v~~~~~~~~~~~~~~~~~ 40 (86)
....|.|++.|..+...+..+..+
T Consensus 47 ~~seG~V~l~D~~t~~~ias~~I~ 70 (125)
T cd01211 47 NNIEGTVKLIDAQSNKVIASFSIV 70 (125)
T ss_pred CCCCceEEEEcCCCCcEEEEEEEE
Confidence 345788999998887776666543
No 455
>KOG1983|consensus
Probab=29.51 E-value=2e+02 Score=20.08 Aligned_cols=26 Identities=23% Similarity=0.510 Sum_probs=22.3
Q ss_pred eCCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 49 TADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 49 ~~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
..++..++++-.|+.+..||...+..
T Consensus 243 ~~~~~~~v~~h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 243 SRDGSHFVSYHTDGSYAFWDVSSGKL 268 (993)
T ss_pred ccCCceEEEEEecCCEEeeecCCCce
Confidence 35688999999999999999988755
No 456
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=28.54 E-value=83 Score=15.35 Aligned_cols=17 Identities=12% Similarity=0.130 Sum_probs=13.4
Q ss_pred CCEEEEeCCCCeEEEee
Q psy13945 62 QTISAWHTNDGSLKCNI 78 (86)
Q Consensus 62 ~~i~~~~~~~~~~~~~~ 78 (86)
..+.+|++.+|..+.+.
T Consensus 41 E~V~I~Nv~NG~Rf~TY 57 (111)
T cd06919 41 EKVLVVNVNNGARFETY 57 (111)
T ss_pred CEEEEEECCCCcEEEEE
Confidence 47899999999877654
No 457
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=28.14 E-value=1.2e+02 Score=17.23 Aligned_cols=61 Identities=18% Similarity=0.180 Sum_probs=37.2
Q ss_pred CCCEEEEEeCCCeEEEEEccC-CceEEEEe--CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 10 SGSWIAIGQASGVLTLLDLRT-GTSLASWK--GHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~--~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
.+.+++.|+....+.++..+. ...+..+. .....+.++. -+++..++.+..++.+.++...
T Consensus 138 ~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 138 FKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp ETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred cccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 356888888888887775443 22222222 2334456666 4455688889999998888764
No 458
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=27.85 E-value=58 Score=13.38 Aligned_cols=6 Identities=17% Similarity=0.285 Sum_probs=2.0
Q ss_pred EEEECC
Q psy13945 4 CIAVSS 9 (86)
Q Consensus 4 ~~~~~~ 9 (86)
.+.-+|
T Consensus 16 ~v~~sp 21 (57)
T PF10411_consen 16 SVSPSP 21 (57)
T ss_dssp EEEE-S
T ss_pred EEEcCC
Confidence 334444
No 459
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=27.81 E-value=92 Score=15.67 Aligned_cols=24 Identities=17% Similarity=0.264 Sum_probs=13.7
Q ss_pred eCCCC-eEEEEeCCCCEEEEeCCCC
Q psy13945 49 TADDG-TLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 49 ~~~~~-~~~~~~~~~~i~~~~~~~~ 72 (86)
.++.. .++.|-.|+.|+.+++...
T Consensus 19 D~dt~llyl~gKGD~~ir~yEv~~~ 43 (136)
T PF08954_consen 19 DEDTNLLYLAGKGDGNIRYYEVSDE 43 (136)
T ss_dssp -TTT-EEEEEETT-S-EEEEEE-SS
T ss_pred cCCCCEEEEEeccCcEEEEEEEcCC
Confidence 34444 4467778999999998765
No 460
>KOG3950|consensus
Probab=27.45 E-value=1.3e+02 Score=17.16 Aligned_cols=22 Identities=5% Similarity=0.202 Sum_probs=14.5
Q ss_pred cceEEEE-eCCCCeEEEEeCCCC
Q psy13945 42 GEILQLV-TADDGTLISSSLDQT 63 (86)
Q Consensus 42 ~~v~~~~-~~~~~~~~~~~~~~~ 63 (86)
+.++.+. .+++.++++...-+.
T Consensus 260 q~v~eiCvC~nGkLfLs~Ag~~s 282 (292)
T KOG3950|consen 260 QKVFEICVCPNGKLFLSQAGPGS 282 (292)
T ss_pred ceEEEEEEecCCcEEEeccCCCC
Confidence 4577777 788888875544433
No 461
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=27.19 E-value=1.2e+02 Score=16.96 Aligned_cols=32 Identities=13% Similarity=0.329 Sum_probs=20.2
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK 38 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 38 (86)
+-..|||++++.+..+.. ++|....+.+..+.
T Consensus 175 ~~llPdG~lFi~an~~s~--i~d~~~n~v~~~lP 206 (243)
T PF07250_consen 175 VHLLPDGNLFIFANRGSI--IYDYKTNTVVRTLP 206 (243)
T ss_pred EEEcCCCCEEEEEcCCcE--EEeCCCCeEEeeCC
Confidence 345788998888876544 44766665544443
No 462
>PF09142 TruB_C: tRNA Pseudouridine synthase II, C terminal; InterPro: IPR015225 Pseudouridine synthases catalyse the isomerisation of uridine to pseudouridine (Psi) in a variety of RNA molecules, and may function as RNA chaperones. Pseudouridine is the most abundant modified nucleotide found in all cellular RNAs. There are four distinct families of pseudouridine synthases that share no global sequence similarity, but which do share the same fold of their catalytic domain(s) and uracil-binding site and are descended from a common molecular ancestor. The catalytic domain consists of two subdomains, each of which has an alpha+beta structure that has some similarity to the ferredoxin-like fold (note: some pseudouridine synthases contain additional domains). The active site is the most conserved structural region of the superfamily and is located between the two homologous domains. These families are []: Pseudouridine synthase I, TruA. Pseudouridine synthase II, TruB, which contains and additional C-terminal PUA domain. Pseudouridine synthase RsuA (ribosomal small subunit) and RluC/RluD (ribosomal large subunits), both of which contain an additional N-terminal alpha-L RNA-binding motif. Pseudouridine synthase TruD, which has a natural circular permutation in the catalytic domain, as well as an insertion of a family-specific alpha+beta subdomain. TruB is responsible for the pseudouridine residue present in the T loops of virtually all tRNAs. TruB recognises the preformed 3-D structure of the T loop primarily through shape complementarity. It accesses its substrate uridyl residue by flipping out the nucleotide and disrupts the tertiary structure of tRNA []. The C-terminal domain adopts a secondary structure consisting of a four-stranded beta sheet and one alpha helix, similar to that found in PUA domains. It is predominantly involved in RNA-binding, being mostly found in tRNA pseudouridine synthase B (TruB) []. ; GO: 0003723 RNA binding, 0009982 pseudouridine synthase activity, 0001522 pseudouridine synthesis, 0009451 RNA modification; PDB: 1SGV_B.
Probab=26.04 E-value=65 Score=13.30 Aligned_cols=10 Identities=30% Similarity=0.524 Sum_probs=3.7
Q ss_pred EECCCCCEEE
Q psy13945 6 AVSSSGSWIA 15 (86)
Q Consensus 6 ~~~~~~~~~~ 15 (86)
.+.|||++++
T Consensus 31 a~~pdG~lvA 40 (56)
T PF09142_consen 31 AFAPDGRLVA 40 (56)
T ss_dssp EE-TTS-EEE
T ss_pred EECCCCcEEE
Confidence 3445555444
No 463
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=26.03 E-value=2.1e+02 Score=19.08 Aligned_cols=67 Identities=21% Similarity=0.231 Sum_probs=40.2
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEEEeCCc----cc--------eEEEE----eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 12 SWIAIGQASGVLTLLDLRTGTSLASWKGHE----GE--------ILQLV----TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 12 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~--------v~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
.+-+.+-..|.+.-.|++++++.-+.+.-+ .+ +..+- ...+-.++.+..|..++.+|..+|+.+
T Consensus 644 glpcqap~wGyv~a~DlkTgk~~wk~~~gt~~d~~p~plp~~~g~pt~Ggp~~t~Ggv~f~a~~~dqYLrayd~~~G~~l 723 (773)
T COG4993 644 GLPCQAPPWGYVKAIDLKTGKELWKHRNGTVYDMTPVPLPFKVGFPTLGGPIGTAGGVAFIAATGDQYLRAYDGTGGKQL 723 (773)
T ss_pred CcccccCCcceeeeeeccccceeeeccCCccccCcccCcccccccccCCCccccccceEEEecchheeeeeeeccCCcee
Confidence 334455667888889999888765522110 00 00000 113445667778899999999888766
Q ss_pred Eee
Q psy13945 76 CNI 78 (86)
Q Consensus 76 ~~~ 78 (86)
..-
T Consensus 724 W~a 726 (773)
T COG4993 724 WQA 726 (773)
T ss_pred eee
Confidence 543
No 464
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=25.65 E-value=1.4e+02 Score=17.12 Aligned_cols=55 Identities=13% Similarity=0.228 Sum_probs=32.1
Q ss_pred CCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEe------CCCCEEEEeCCCCe
Q psy13945 19 ASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSS------LDQTISAWHTNDGS 73 (86)
Q Consensus 19 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~------~~~~i~~~~~~~~~ 73 (86)
...-+.+||....+-...-.+-.+.|..+. ..+..+++.|. ....+..||..+..
T Consensus 14 ~C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~ 75 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT 75 (281)
T ss_pred CCCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe
Confidence 356788999765443322223446677777 54555556554 23456777776543
No 465
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=25.28 E-value=87 Score=14.51 Aligned_cols=24 Identities=29% Similarity=0.641 Sum_probs=16.8
Q ss_pred EEEECCCCCEEEEEeCC-CeEEEEE
Q psy13945 4 CIAVSSSGSWIAIGQAS-GVLTLLD 27 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~-~~v~~~~ 27 (86)
++...-.|..++.|+.. +.+.+..
T Consensus 2 ~v~~~~~g~~lAiGG~~g~~~Wfvt 26 (86)
T PF11090_consen 2 CVTIEHKGRPLAIGGNNGGCLWFVT 26 (86)
T ss_pred eEEEecCCeEEEEccccCCeEEEEE
Confidence 56667788999998887 4444443
No 466
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=25.25 E-value=1.9e+02 Score=18.37 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=20.7
Q ss_pred CCCCEEEEEeCCCeEEEEEcc---CCceEEEEeC
Q psy13945 9 SSGSWIAIGQASGVLTLLDLR---TGTSLASWKG 39 (86)
Q Consensus 9 ~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~ 39 (86)
.||++|+... ++.+.++|.. ..+....+..
T Consensus 20 TDG~yIY~v~-~~~l~Iida~p~~~~~~~s~I~~ 52 (521)
T PF09826_consen 20 TDGEYIYVVS-GGRLYIIDAYPAEEMKVVSRIDL 52 (521)
T ss_pred ECCCEEEEEe-CCEEEEEECCCchhceEEEEEec
Confidence 3789988887 7899999983 3344444443
No 467
>smart00415 HSF heat shock factor.
Probab=25.16 E-value=90 Score=14.66 Aligned_cols=14 Identities=36% Similarity=0.256 Sum_probs=9.0
Q ss_pred EEEECCCCCEEEEE
Q psy13945 4 CIAVSSSGSWIAIG 17 (86)
Q Consensus 4 ~~~~~~~~~~~~~~ 17 (86)
-+.|+++|..++..
T Consensus 21 iI~W~~~G~~f~I~ 34 (105)
T smart00415 21 IISWSPSGKSFVIW 34 (105)
T ss_pred EEEECCCCCEEEEc
Confidence 36777877765544
No 468
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=24.87 E-value=1.1e+02 Score=15.38 Aligned_cols=17 Identities=12% Similarity=0.157 Sum_probs=13.5
Q ss_pred CCEEEEeCCCCeEEEee
Q psy13945 62 QTISAWHTNDGSLKCNI 78 (86)
Q Consensus 62 ~~i~~~~~~~~~~~~~~ 78 (86)
..+.+|++.+|..+.++
T Consensus 42 E~V~V~Nv~NG~Rf~TY 58 (126)
T PRK05449 42 EKVQIVNVNNGARFETY 58 (126)
T ss_pred CEEEEEECCCCcEEEEE
Confidence 47899999999877654
No 469
>PF13964 Kelch_6: Kelch motif
Probab=24.83 E-value=59 Score=12.45 Aligned_cols=12 Identities=17% Similarity=0.279 Sum_probs=6.5
Q ss_pred CCCEEEEEeCCC
Q psy13945 10 SGSWIAIGQASG 21 (86)
Q Consensus 10 ~~~~~~~~~~~~ 21 (86)
++++.+.|+...
T Consensus 11 ~~~iyv~GG~~~ 22 (50)
T PF13964_consen 11 GGKIYVFGGYDN 22 (50)
T ss_pred CCEEEEECCCCC
Confidence 456556555543
No 470
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=23.06 E-value=1.8e+02 Score=17.33 Aligned_cols=75 Identities=16% Similarity=0.120 Sum_probs=47.7
Q ss_pred EEEECCCCCEEEEEeCC---CeEEEEEccCCceEEE-EeCCccceEEEE-eCCCCeEEEE-eCCCCEEEEeCCCCeEEEe
Q psy13945 4 CIAVSSSGSWIAIGQAS---GVLTLLDLRTGTSLAS-WKGHEGEILQLV-TADDGTLISS-SLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~ 77 (86)
.+.+++++..+...... ..+...|..++..... .......-..+. .|++..+... ...+.+.+-|..+......
T Consensus 211 ~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~ 290 (381)
T COG3391 211 GIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKT 290 (381)
T ss_pred eEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeee
Confidence 56788999876655554 4888888887776554 222221334455 7888877665 3457788888776655544
Q ss_pred e
Q psy13945 78 I 78 (86)
Q Consensus 78 ~ 78 (86)
+
T Consensus 291 ~ 291 (381)
T COG3391 291 G 291 (381)
T ss_pred e
Confidence 3
No 471
>PF13645 YkuD_2: L,D-transpeptidase catalytic domain
Probab=22.92 E-value=1.4e+02 Score=15.95 Aligned_cols=24 Identities=21% Similarity=0.347 Sum_probs=17.0
Q ss_pred eCCCeEEEEEccCCceEE-EEeCCc
Q psy13945 18 QASGVLTLLDLRTGTSLA-SWKGHE 41 (86)
Q Consensus 18 ~~~~~v~~~~~~~~~~~~-~~~~~~ 41 (86)
+....+.|+|+.+++.+. .+.+|.
T Consensus 46 S~~~R~~v~Dl~~~~~l~~~~VaHG 70 (176)
T PF13645_consen 46 SGEKRFFVIDLKKGKLLYNTLVAHG 70 (176)
T ss_pred CCCCeEEEEECCCCEEEEeeeeecc
Confidence 345678899999888765 466554
No 472
>COG5169 HSF1 Heat shock transcription factor [Transcription]
Probab=22.66 E-value=1e+02 Score=17.80 Aligned_cols=16 Identities=25% Similarity=0.164 Sum_probs=11.4
Q ss_pred EEEECCCCCEEEEEeC
Q psy13945 4 CIAVSSSGSWIAIGQA 19 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~ 19 (86)
-+.|+|+|..++.-..
T Consensus 29 ~I~Ws~~G~sfvI~~~ 44 (282)
T COG5169 29 LIQWSPDGRSFVILDP 44 (282)
T ss_pred ceEECCCCCEEEEeCc
Confidence 4789999887665543
No 473
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=22.61 E-value=2.4e+02 Score=18.75 Aligned_cols=27 Identities=26% Similarity=0.389 Sum_probs=24.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEc
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDL 28 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~ 28 (86)
|-.+.+.+++..++..-..|.+.+||.
T Consensus 132 vv~Ik~~~~~~~I~vvl~nG~i~~~d~ 158 (670)
T PF10395_consen 132 VVGIKFSSDGKIIYVVLENGSIQIYDF 158 (670)
T ss_pred eEEEEEecCCCEEEEEEcCCcEEEEec
Confidence 567888989999999999999999998
No 474
>cd01272 FE65_N Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor protein-binding. It contains an N-terminal WW domain followed by two PTB domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=22.08 E-value=1.3e+02 Score=15.31 Aligned_cols=47 Identities=19% Similarity=0.163 Sum_probs=27.8
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEE
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLI 56 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 56 (86)
+|+-++.--+++++++.|..+...+..+..+.=.+..+-..++.-|+
T Consensus 51 eGk~~~m~L~~g~lkLiDP~~~s~LhSqPI~~IRvwGvGrdngrdFA 97 (138)
T cd01272 51 DGKDLFMDLDEGALKLIDPENLTVLHSQPIHTIRVWGVGRDNGRDFA 97 (138)
T ss_pred CcceeEEEecCCceEeeCCCCCceEEeeeeeEEEEEEecCCCCcceE
Confidence 45555666667888888877777666665554444333234444443
No 475
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=21.92 E-value=1.2e+02 Score=19.65 Aligned_cols=16 Identities=13% Similarity=0.150 Sum_probs=11.6
Q ss_pred eeEEEECCCCCEEEEE
Q psy13945 2 IRCIAVSSSGSWIAIG 17 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~ 17 (86)
++..+|+||++.++.+
T Consensus 556 ~tG~~FspD~~TlFV~ 571 (616)
T COG3211 556 FTGPCFSPDGKTLFVN 571 (616)
T ss_pred eecceeCCCCceEEEE
Confidence 4678899998766543
No 476
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=21.56 E-value=2.7e+02 Score=18.84 Aligned_cols=68 Identities=13% Similarity=0.105 Sum_probs=41.8
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEEEeCCcc--c------eEEEE---e--------------CCCCeEEEEeCCCCEEE
Q psy13945 12 SWIAIGQASGVLTLLDLRTGTSLASWKGHEG--E------ILQLV---T--------------ADDGTLISSSLDQTISA 66 (86)
Q Consensus 12 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~------v~~~~---~--------------~~~~~~~~~~~~~~i~~ 66 (86)
..++.++.++.+.-.|..+++++=++..... . ...+. . .+...++.+..|+.+..
T Consensus 195 g~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~LiA 274 (764)
T TIGR03074 195 DTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLIA 274 (764)
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEEE
Confidence 3455556677888888888876433322110 0 00111 1 13346777888999999
Q ss_pred EeCCCCeEEEeec
Q psy13945 67 WHTNDGSLKCNIQ 79 (86)
Q Consensus 67 ~~~~~~~~~~~~~ 79 (86)
.|.++|+.+..+.
T Consensus 275 LDA~TGk~~W~fg 287 (764)
T TIGR03074 275 LDADTGKLCEDFG 287 (764)
T ss_pred EECCCCCEEEEec
Confidence 9999998887653
No 477
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=21.02 E-value=75 Score=12.25 Aligned_cols=23 Identities=17% Similarity=0.437 Sum_probs=16.0
Q ss_pred CCCEEEEEeCCCeEEEEEccCCc
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGT 32 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~ 32 (86)
.|.++..+....-+.+.|+....
T Consensus 10 ~g~yaYva~~~~Gl~IvDISnPs 32 (42)
T PF08309_consen 10 SGNYAYVADGNNGLVIVDISNPS 32 (42)
T ss_pred ECCEEEEEeCCCCEEEEECCCCC
Confidence 45677777667778888876543
No 478
>PF10210 MRP-S32: Mitochondrial 28S ribosomal protein S32; InterPro: IPR019346 This entry represents a family of short proteins; each approximately 100 amino acid residues in length. They are identified as the mitochondrial 28S ribosomal proteins S32.
Probab=20.52 E-value=1.2e+02 Score=14.38 Aligned_cols=11 Identities=55% Similarity=0.637 Sum_probs=4.5
Q ss_pred EEECCCCCEEE
Q psy13945 5 IAVSSSGSWIA 15 (86)
Q Consensus 5 ~~~~~~~~~~~ 15 (86)
+++..||+.|+
T Consensus 6 iavT~dG~tIV 16 (96)
T PF10210_consen 6 IAVTSDGRTIV 16 (96)
T ss_pred EEEecCCCEEE
Confidence 34444444333
No 479
>PF00447 HSF_DNA-bind: HSF-type DNA-binding; InterPro: IPR000232 Heat shock factor (HSF) is a transcriptional activator of heat shock genes []: it binds specifically to heat shock promoter elements, which are palindromic sequences rich with repetitive purine and pyrimidine motifs []. Under normal conditions, HSF is a homo-trimeric cytoplasmic protein, but heat shock activation results in relocalisation to the nucleus []. Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats []. Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear []. Two sequences flanking the N-terminal zippers fit the consensus of a bi- partite nuclear localisation signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus []. The DNA-binding component of HSF lies to the N terminus of the first NLS region, and is referred to as the HSF domain.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1FBQ_B 1FYL_B 1FBS_A 1FYM_B 3HTS_B 2HTS_A 3HSF_A 1FBU_B 1FYK_A 2LDU_A ....
Probab=20.20 E-value=1.1e+02 Score=14.14 Aligned_cols=12 Identities=33% Similarity=0.332 Sum_probs=7.1
Q ss_pred EEECCCCCEEEE
Q psy13945 5 IAVSSSGSWIAI 16 (86)
Q Consensus 5 ~~~~~~~~~~~~ 16 (86)
+.|+++|..++.
T Consensus 19 I~W~~~G~~fiI 30 (103)
T PF00447_consen 19 IRWSPDGDSFII 30 (103)
T ss_dssp CEECTTSSEEEE
T ss_pred EEEeCCCCEEEE
Confidence 567777665443
Done!