Query psy13945
Match_columns 86
No_of_seqs 122 out of 1540
Neff 12.1
Searched_HMMs 29240
Date Fri Aug 16 15:39:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13945.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13945hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 99.9 2E-20 7E-25 99.0 12.3 85 1-85 15-100 (304)
2 3ow8_A WD repeat-containing pr 99.9 3.4E-20 1.2E-24 98.9 13.0 85 1-85 208-293 (321)
3 1vyh_C Platelet-activating fac 99.8 6E-20 2.1E-24 100.5 11.3 85 1-85 110-195 (410)
4 2ymu_A WD-40 repeat protein; u 99.8 1.1E-19 3.8E-24 102.1 12.0 83 1-85 18-101 (577)
5 3ow8_A WD repeat-containing pr 99.8 2.6E-19 9E-24 95.5 12.7 85 1-85 166-251 (321)
6 4h5i_A Guanine nucleotide-exch 99.8 1.2E-19 4E-24 98.3 11.4 71 1-71 271-343 (365)
7 4gqb_B Methylosome protein 50; 99.8 3.9E-19 1.3E-23 95.8 12.2 84 1-85 84-172 (344)
8 2ynn_A Coatomer subunit beta'; 99.8 2.7E-19 9.4E-24 94.7 11.4 85 1-85 57-143 (304)
9 1vyh_C Platelet-activating fac 99.8 1.9E-19 6.6E-24 98.5 10.7 85 1-85 152-237 (410)
10 3frx_A Guanine nucleotide-bind 99.8 1.7E-18 6E-23 92.2 13.6 84 1-85 67-151 (319)
11 4ery_A WD repeat-containing pr 99.8 1.7E-18 5.7E-23 91.6 13.0 85 1-85 25-110 (312)
12 4ery_A WD repeat-containing pr 99.8 3.2E-18 1.1E-22 90.5 13.7 85 1-85 67-152 (312)
13 4gqb_B Methylosome protein 50; 99.8 2.3E-18 7.9E-23 92.8 12.5 79 1-79 129-209 (344)
14 2pbi_B Guanine nucleotide-bind 99.8 4.9E-18 1.7E-22 91.6 13.5 85 1-85 156-243 (354)
15 2hes_X YDR267CP; beta-propelle 99.8 3.4E-18 1.2E-22 91.4 12.7 85 1-85 109-200 (330)
16 3bg1_A Protein SEC13 homolog; 99.8 2.9E-18 9.9E-23 91.2 12.0 85 1-85 15-106 (316)
17 3frx_A Guanine nucleotide-bind 99.8 4E-18 1.4E-22 90.8 12.4 85 1-85 19-110 (319)
18 2xzm_R RACK1; ribosome, transl 99.8 5.2E-18 1.8E-22 91.0 12.1 85 1-85 23-121 (343)
19 1erj_A Transcriptional repress 99.8 1E-17 3.6E-22 91.2 13.0 79 2-80 126-205 (393)
20 2pm7_B Protein transport prote 99.8 5.1E-18 1.8E-22 89.6 10.8 85 1-85 11-102 (297)
21 3fm0_A Protein CIAO1; WDR39,SG 99.8 1.8E-17 6E-22 89.1 12.8 85 1-85 63-153 (345)
22 2hes_X YDR267CP; beta-propelle 99.8 2.1E-17 7.3E-22 88.3 13.0 85 1-85 60-156 (330)
23 3vl1_A 26S proteasome regulato 99.8 2.8E-17 9.4E-22 89.5 13.5 81 1-81 141-222 (420)
24 3fm0_A Protein CIAO1; WDR39,SG 99.8 1.4E-17 4.9E-22 89.4 12.0 85 1-85 18-108 (345)
25 1got_B GT-beta; complex (GTP-b 99.8 4.1E-17 1.4E-21 87.5 13.6 79 1-79 186-265 (340)
26 2xzm_R RACK1; ribosome, transl 99.8 3.2E-17 1.1E-21 87.9 13.0 72 1-72 78-150 (343)
27 3f3f_A Nucleoporin SEH1; struc 99.8 4.1E-17 1.4E-21 86.4 13.2 85 1-85 13-113 (351)
28 3zwl_B Eukaryotic translation 99.8 3.3E-17 1.1E-21 87.5 12.9 79 1-79 34-113 (369)
29 1erj_A Transcriptional repress 99.8 2.2E-17 7.5E-22 90.0 12.1 85 1-85 258-355 (393)
30 2ymu_A WD-40 repeat protein; u 99.8 2.4E-17 8.2E-22 92.7 12.6 83 1-85 469-552 (577)
31 2aq5_A Coronin-1A; WD40 repeat 99.8 3.8E-17 1.3E-21 89.0 12.8 85 1-85 83-179 (402)
32 1got_B GT-beta; complex (GTP-b 99.8 2E-17 6.7E-22 88.7 11.4 84 1-85 145-229 (340)
33 4ggc_A P55CDC, cell division c 99.8 2.9E-17 9.8E-22 86.6 11.8 82 2-85 28-112 (318)
34 3sfz_A APAF-1, apoptotic pepti 99.8 3.1E-17 1E-21 98.5 13.0 85 1-85 617-702 (1249)
35 1nr0_A Actin interacting prote 99.8 4.9E-17 1.7E-21 92.7 13.1 85 1-85 149-242 (611)
36 3mkq_A Coatomer beta'-subunit; 99.8 3.2E-17 1.1E-21 95.0 12.3 85 1-85 15-100 (814)
37 3vu4_A KMHSV2; beta-propeller 99.8 4.5E-17 1.5E-21 87.9 11.8 72 1-72 197-272 (355)
38 4g56_B MGC81050 protein; prote 99.8 5E-17 1.7E-21 87.8 11.9 84 1-85 228-314 (357)
39 1nr0_A Actin interacting prote 99.8 7.5E-17 2.6E-21 91.9 12.9 80 1-80 192-279 (611)
40 3iz6_a 40S ribosomal protein R 99.8 8.8E-17 3E-21 87.3 12.4 85 1-85 251-347 (380)
41 3jrp_A Fusion protein of prote 99.8 4.8E-17 1.7E-21 87.3 11.1 85 1-85 13-104 (379)
42 2pbi_B Guanine nucleotide-bind 99.8 1.5E-16 5.3E-21 85.8 13.0 85 1-85 242-329 (354)
43 1pgu_A Actin interacting prote 99.7 5.1E-17 1.7E-21 91.6 11.4 85 1-85 490-587 (615)
44 3k26_A Polycomb protein EED; W 99.7 1.1E-16 3.8E-21 85.5 11.7 84 2-85 72-164 (366)
45 2aq5_A Coronin-1A; WD40 repeat 99.7 2.6E-16 8.8E-21 85.7 12.7 84 1-84 133-221 (402)
46 3dm0_A Maltose-binding peripla 99.7 2.1E-16 7E-21 91.0 12.8 85 1-85 384-475 (694)
47 3lrv_A PRE-mRNA-splicing facto 99.7 8.3E-17 2.8E-21 86.3 10.4 85 1-85 127-217 (343)
48 3dwl_C Actin-related protein 2 99.7 4.5E-18 1.5E-22 91.6 5.3 85 1-85 13-103 (377)
49 3gre_A Serine/threonine-protei 99.7 1.2E-16 4.1E-21 87.6 10.8 84 1-84 216-305 (437)
50 1sq9_A Antiviral protein SKI8; 99.7 2.6E-16 8.7E-21 85.2 11.8 79 1-79 235-330 (397)
51 4g56_B MGC81050 protein; prote 99.7 1.5E-16 5.1E-21 85.9 10.7 78 1-78 141-220 (357)
52 3iz6_a 40S ribosomal protein R 99.7 4.4E-16 1.5E-20 84.6 12.6 80 2-81 208-290 (380)
53 3mmy_A MRNA export factor; mRN 99.7 2.8E-16 9.7E-21 83.9 11.7 84 1-85 41-130 (368)
54 3dm0_A Maltose-binding peripla 99.7 4.9E-16 1.7E-20 89.5 12.9 73 1-73 432-505 (694)
55 4e54_B DNA damage-binding prot 99.7 3.1E-16 1E-20 86.4 11.6 78 1-78 121-203 (435)
56 1gxr_A ESG1, transducin-like e 99.7 1.2E-15 4.2E-20 80.7 13.4 85 1-85 99-186 (337)
57 4aow_A Guanine nucleotide-bind 99.7 1E-15 3.5E-20 81.3 13.1 82 1-82 40-128 (340)
58 1k8k_C P40, ARP2/3 complex 41 99.7 5.8E-16 2E-20 83.1 12.2 84 1-84 10-98 (372)
59 2oaj_A Protein SNI1; WD40 repe 99.7 1.6E-16 5.4E-21 94.0 10.7 84 1-85 490-625 (902)
60 4gga_A P55CDC, cell division c 99.7 6.7E-16 2.3E-20 84.7 12.3 82 2-85 108-192 (420)
61 3f3f_A Nucleoporin SEH1; struc 99.7 6.2E-16 2.1E-20 81.9 11.5 81 1-81 216-350 (351)
62 3sfz_A APAF-1, apoptotic pepti 99.7 9.2E-16 3.1E-20 92.3 13.3 85 1-85 659-746 (1249)
63 3vl1_A 26S proteasome regulato 99.7 2.6E-16 9E-21 85.7 10.0 83 3-85 101-184 (420)
64 3lrv_A PRE-mRNA-splicing facto 99.7 1.6E-16 5.5E-21 85.2 8.9 76 2-78 173-251 (343)
65 1yfq_A Cell cycle arrest prote 99.7 1E-15 3.5E-20 81.4 11.9 85 1-85 195-297 (342)
66 4h5i_A Guanine nucleotide-exch 99.7 7.5E-16 2.6E-20 83.5 11.5 84 2-85 222-315 (365)
67 1k8k_C P40, ARP2/3 complex 41 99.7 6.8E-16 2.3E-20 82.8 11.2 85 1-85 144-247 (372)
68 4gq1_A NUP37; propeller, trans 99.7 1.4E-16 4.8E-21 86.9 8.6 78 1-78 138-225 (393)
69 3odt_A Protein DOA1; ubiquitin 99.7 9.5E-16 3.3E-20 80.6 11.1 83 1-85 186-269 (313)
70 4ggc_A P55CDC, cell division c 99.7 7.3E-16 2.5E-20 81.2 10.3 71 2-72 243-316 (318)
71 2pm7_B Protein transport prote 99.7 1.8E-15 6.2E-20 79.9 11.7 85 1-85 101-207 (297)
72 3dwl_C Actin-related protein 2 99.7 1.4E-16 4.9E-21 85.8 7.7 85 1-85 57-149 (377)
73 2j04_A TAU60, YPL007P, hypothe 99.7 1.3E-15 4.3E-20 86.7 11.6 82 2-85 132-229 (588)
74 3mkq_A Coatomer beta'-subunit; 99.7 8.7E-16 3E-20 89.1 11.2 85 1-85 57-143 (814)
75 4gga_A P55CDC, cell division c 99.7 5.6E-16 1.9E-20 84.9 9.9 75 2-76 323-400 (420)
76 1r5m_A SIR4-interacting protei 99.7 6.6E-15 2.2E-19 79.9 13.7 82 1-83 110-192 (425)
77 3jro_A Fusion protein of prote 99.7 5.6E-16 1.9E-20 90.2 9.9 85 1-85 11-102 (753)
78 3v7d_B Cell division control p 99.7 3E-15 1E-19 82.6 12.3 80 3-85 126-206 (464)
79 3dw8_B Serine/threonine-protei 99.7 1.9E-15 6.4E-20 82.8 11.4 74 1-74 30-129 (447)
80 3k26_A Polycomb protein EED; W 99.7 3E-16 1E-20 83.9 8.0 75 1-75 117-196 (366)
81 3gre_A Serine/threonine-protei 99.7 3.9E-15 1.3E-19 81.6 12.4 77 7-83 178-258 (437)
82 3ei3_B DNA damage-binding prot 99.7 2.1E-15 7.2E-20 81.6 11.1 83 1-85 165-253 (383)
83 1pgu_A Actin interacting prote 99.7 6.5E-15 2.2E-19 83.1 13.1 85 1-85 162-256 (615)
84 1r5m_A SIR4-interacting protei 99.7 4.7E-15 1.6E-19 80.5 11.7 84 1-85 249-333 (425)
85 3odt_A Protein DOA1; ubiquitin 99.7 4.9E-15 1.7E-19 77.9 11.4 84 1-85 20-107 (313)
86 2j04_A TAU60, YPL007P, hypothe 99.7 3.1E-15 1E-19 85.1 11.1 82 1-85 87-185 (588)
87 3v7d_B Cell division control p 99.7 4.9E-15 1.7E-19 81.8 11.7 80 6-85 275-355 (464)
88 2oit_A Nucleoporin 214KDA; NH2 99.7 9.7E-15 3.3E-19 80.8 12.8 80 1-81 151-232 (434)
89 1gxr_A ESG1, transducin-like e 99.7 1.7E-14 5.8E-19 76.4 13.3 79 1-79 143-222 (337)
90 2pm9_A Protein WEB1, protein t 99.7 2.1E-15 7.2E-20 82.0 9.9 85 1-85 216-308 (416)
91 1sq9_A Antiviral protein SKI8; 99.7 3.4E-15 1.1E-19 80.8 10.6 79 1-80 188-276 (397)
92 2vdu_B TRNA (guanine-N(7)-)-me 99.7 2.3E-15 8E-20 83.1 10.0 78 1-79 197-279 (450)
93 2w18_A PALB2, fancn, partner a 99.6 7.6E-15 2.6E-19 79.4 11.1 82 3-84 182-327 (356)
94 1yfq_A Cell cycle arrest prote 99.6 4.8E-15 1.6E-19 78.8 10.4 84 1-85 13-104 (342)
95 3ei3_B DNA damage-binding prot 99.6 3.5E-15 1.2E-19 80.7 10.0 80 1-81 206-292 (383)
96 2j04_B YDR362CP, TAU91; beta p 99.6 3.4E-16 1.1E-20 88.4 6.0 85 1-85 310-400 (524)
97 4aez_A CDC20, WD repeat-contai 99.6 2E-14 6.9E-19 78.4 12.6 84 1-85 136-220 (401)
98 1p22_A F-BOX/WD-repeat protein 99.6 2.1E-14 7.2E-19 79.0 12.8 81 2-85 136-216 (435)
99 2vdu_B TRNA (guanine-N(7)-)-me 99.6 2.5E-15 8.6E-20 83.0 9.2 85 1-85 151-244 (450)
100 4aez_A CDC20, WD repeat-contai 99.6 3.6E-14 1.2E-18 77.4 13.4 83 1-85 178-262 (401)
101 3jrp_A Fusion protein of prote 99.6 1.3E-14 4.5E-19 77.8 11.4 85 1-85 57-150 (379)
102 3i2n_A WD repeat-containing pr 99.6 5.6E-15 1.9E-19 78.8 9.9 85 1-85 20-114 (357)
103 3bg1_A Protein SEC13 homolog; 99.6 5.1E-15 1.8E-19 78.8 9.6 84 1-84 59-152 (316)
104 3zwl_B Eukaryotic translation 99.6 3.5E-14 1.2E-18 75.9 12.4 79 1-79 177-257 (369)
105 4e54_B DNA damage-binding prot 99.6 3.4E-15 1.2E-19 82.2 8.7 82 1-82 252-338 (435)
106 3dw8_B Serine/threonine-protei 99.6 5.7E-15 2E-19 80.9 9.5 81 1-82 228-327 (447)
107 2oit_A Nucleoporin 214KDA; NH2 99.6 2E-15 6.9E-20 83.5 7.6 83 2-84 95-194 (434)
108 4aow_A Guanine nucleotide-bind 99.6 7.7E-14 2.6E-18 74.1 13.3 80 2-81 174-256 (340)
109 2oaj_A Protein SNI1; WD40 repe 99.6 2.4E-14 8.2E-19 84.9 12.3 73 1-75 60-133 (902)
110 2xyi_A Probable histone-bindin 99.6 2.1E-14 7.1E-19 79.1 11.4 85 1-85 233-324 (430)
111 2pm9_A Protein WEB1, protein t 99.6 4E-15 1.4E-19 80.9 8.4 73 1-73 69-147 (416)
112 4a11_B DNA excision repair pro 99.6 2.9E-14 9.9E-19 77.1 11.6 79 1-79 45-139 (408)
113 2j04_B YDR362CP, TAU91; beta p 99.6 1.7E-15 5.9E-20 85.5 6.8 80 1-81 268-352 (524)
114 2xyi_A Probable histone-bindin 99.6 2.2E-14 7.6E-19 79.0 10.9 85 1-85 279-381 (430)
115 3mmy_A MRNA export factor; mRN 99.6 2.2E-14 7.7E-19 76.6 10.7 81 1-82 88-171 (368)
116 3i2n_A WD repeat-containing pr 99.6 8E-15 2.7E-19 78.2 8.8 85 1-85 211-324 (357)
117 1p22_A F-BOX/WD-repeat protein 99.6 7.6E-14 2.6E-18 76.8 12.4 82 1-85 258-339 (435)
118 4a11_B DNA excision repair pro 99.6 6.2E-14 2.1E-18 75.8 11.8 78 1-78 247-372 (408)
119 2ovr_B FBW7, F-BOX/WD repeat p 99.6 4.4E-14 1.5E-18 77.8 10.9 77 7-85 125-202 (445)
120 4gq1_A NUP37; propeller, trans 99.6 3.2E-15 1.1E-19 81.6 5.5 78 8-85 98-189 (393)
121 3jro_A Fusion protein of prote 99.6 6.2E-14 2.1E-18 81.7 11.0 85 1-85 55-148 (753)
122 3vu4_A KMHSV2; beta-propeller 99.6 6E-14 2E-18 75.8 10.1 69 17-85 155-243 (355)
123 2ovr_B FBW7, F-BOX/WD repeat p 99.5 6.6E-13 2.3E-17 73.2 12.6 80 2-84 242-321 (445)
124 2w18_A PALB2, fancn, partner a 99.5 1.6E-13 5.6E-18 74.3 9.9 81 2-82 114-223 (356)
125 3bws_A Protein LP49; two-domai 99.4 1E-11 3.6E-16 68.0 11.6 80 2-81 172-253 (433)
126 1l0q_A Surface layer protein; 99.4 2.8E-11 9.6E-16 65.6 12.6 79 2-81 34-115 (391)
127 3bws_A Protein LP49; two-domai 99.4 1.1E-12 3.8E-17 71.8 6.5 83 2-84 125-213 (433)
128 1l0q_A Surface layer protein; 99.4 7.7E-11 2.6E-15 63.9 12.8 80 2-82 202-286 (391)
129 2hqs_A Protein TOLB; TOLB, PAL 99.3 1.9E-10 6.5E-15 63.4 13.0 80 1-82 180-266 (415)
130 1nir_A Nitrite reductase; hemo 99.3 5E-10 1.7E-14 63.8 12.5 78 2-80 181-266 (543)
131 1k32_A Tricorn protease; prote 99.3 2.3E-10 7.7E-15 68.9 11.0 80 2-82 381-471 (1045)
132 1pby_B Quinohemoprotein amine 99.2 2.3E-09 7.7E-14 56.8 11.0 76 2-80 243-319 (337)
133 3o4h_A Acylamino-acid-releasin 99.1 5E-10 1.7E-14 63.7 8.2 78 3-82 153-237 (582)
134 2ecf_A Dipeptidyl peptidase IV 99.1 6.3E-10 2.1E-14 64.7 8.2 70 2-72 39-139 (741)
135 1nir_A Nitrite reductase; hemo 99.1 2.8E-09 9.6E-14 60.8 10.0 74 6-80 144-220 (543)
136 1jmx_B Amine dehydrogenase; ox 99.1 1.2E-08 4E-13 54.4 11.8 77 2-81 257-335 (349)
137 2hqs_A Protein TOLB; TOLB, PAL 99.0 4.2E-09 1.4E-13 58.2 9.2 81 2-85 313-400 (415)
138 2ojh_A Uncharacterized protein 99.0 5.8E-09 2E-13 54.1 9.3 82 2-83 175-272 (297)
139 3vgz_A Uncharacterized protein 99.0 1.8E-08 6.1E-13 53.8 10.7 78 2-79 143-223 (353)
140 3u4y_A Uncharacterized protein 99.0 2.6E-08 8.7E-13 53.0 10.9 77 4-80 44-126 (331)
141 2ecf_A Dipeptidyl peptidase IV 99.0 7.8E-09 2.7E-13 60.2 9.3 78 2-81 111-191 (741)
142 3vgz_A Uncharacterized protein 99.0 3.9E-08 1.3E-12 52.5 10.9 78 2-79 187-270 (353)
143 2oiz_A Aromatic amine dehydrog 99.0 6.9E-08 2.4E-12 52.6 11.8 72 5-79 259-344 (361)
144 1pby_B Quinohemoprotein amine 98.9 4.9E-08 1.7E-12 51.7 10.4 75 3-80 85-172 (337)
145 1xfd_A DIP, dipeptidyl aminope 98.9 4.8E-09 1.6E-13 60.9 6.8 77 2-80 63-152 (723)
146 1ri6_A Putative isomerase YBHE 98.9 3.1E-08 1E-12 52.6 9.3 78 2-80 40-127 (343)
147 3pe7_A Oligogalacturonate lyas 98.9 5.4E-09 1.8E-13 56.6 6.5 76 5-80 41-120 (388)
148 3hfq_A Uncharacterized protein 98.9 1E-07 3.5E-12 51.1 11.1 74 2-75 242-323 (347)
149 1k32_A Tricorn protease; prote 98.9 3.5E-08 1.2E-12 59.7 10.1 81 2-84 340-422 (1045)
150 1xfd_A DIP, dipeptidyl aminope 98.9 1.2E-09 4E-14 63.4 3.7 71 3-74 20-103 (723)
151 2ojh_A Uncharacterized protein 98.8 1E-07 3.5E-12 49.5 9.5 80 2-81 131-215 (297)
152 1jmx_B Amine dehydrogenase; ox 98.8 1E-07 3.6E-12 50.7 9.0 76 4-79 4-82 (349)
153 2z3z_A Dipeptidyl aminopeptida 98.8 9.6E-08 3.3E-12 55.5 9.4 71 2-72 183-294 (706)
154 1ri6_A Putative isomerase YBHE 98.8 4.1E-07 1.4E-11 48.3 11.0 71 2-73 233-312 (343)
155 1z68_A Fibroblast activation p 98.8 3.4E-08 1.2E-12 57.5 6.7 72 2-77 62-145 (719)
156 3hfq_A Uncharacterized protein 98.8 1.2E-07 4.2E-12 50.8 8.2 68 3-70 43-116 (347)
157 1z68_A Fibroblast activation p 98.7 4.1E-08 1.4E-12 57.1 6.0 70 4-74 20-102 (719)
158 3scy_A Hypothetical bacterial 98.7 1E-06 3.5E-11 47.5 11.0 73 3-76 262-344 (361)
159 3o4h_A Acylamino-acid-releasin 98.7 6.6E-08 2.2E-12 55.2 6.4 71 2-75 197-278 (582)
160 2z3z_A Dipeptidyl aminopeptida 98.7 2E-07 6.8E-12 54.2 8.3 81 2-82 260-354 (706)
161 3u4y_A Uncharacterized protein 98.7 9E-07 3.1E-11 47.0 10.3 75 6-81 4-82 (331)
162 3azo_A Aminopeptidase; POP fam 98.7 6.6E-07 2.2E-11 51.7 10.0 78 2-79 190-282 (662)
163 2dg1_A DRP35, lactonase; beta 98.7 2.3E-06 7.8E-11 45.7 11.3 74 2-75 47-125 (333)
164 3e5z_A Putative gluconolactona 98.6 2.1E-06 7E-11 45.3 10.5 72 2-75 30-103 (296)
165 2gop_A Trilobed protease; beta 98.6 2.2E-06 7.7E-11 45.8 10.7 73 2-76 61-166 (347)
166 4a5s_A Dipeptidyl peptidase 4 98.6 3E-07 1E-11 54.1 7.1 72 3-76 20-106 (740)
167 3scy_A Hypothetical bacterial 98.6 4.9E-06 1.7E-10 44.9 11.3 73 2-74 157-245 (361)
168 1q7f_A NHL, brain tumor CG1071 98.6 3.3E-06 1.1E-10 44.2 10.3 69 2-72 209-281 (286)
169 2oiz_A Aromatic amine dehydrog 98.6 8E-07 2.8E-11 48.4 8.2 74 4-77 54-146 (361)
170 3azo_A Aminopeptidase; POP fam 98.6 4.4E-07 1.5E-11 52.4 7.3 70 2-72 132-228 (662)
171 1qks_A Cytochrome CD1 nitrite 98.6 6.9E-06 2.4E-10 47.5 11.9 77 2-79 199-283 (567)
172 4a5s_A Dipeptidyl peptidase 4 98.5 6.8E-07 2.3E-11 52.6 7.8 71 4-76 66-146 (740)
173 3fvz_A Peptidyl-glycine alpha- 98.5 5.3E-06 1.8E-10 44.5 10.5 71 2-72 26-122 (329)
174 3c5m_A Oligogalacturonate lyas 98.5 5.2E-07 1.8E-11 48.9 6.4 77 3-79 39-119 (396)
175 3fvz_A Peptidyl-glycine alpha- 98.5 9.8E-06 3.4E-10 43.5 11.0 77 2-79 145-235 (329)
176 2xdw_A Prolyl endopeptidase; a 98.5 2.6E-06 8.9E-11 49.9 9.1 71 2-73 127-219 (710)
177 1q7f_A NHL, brain tumor CG1071 98.5 1.3E-05 4.5E-10 41.9 11.0 76 2-79 166-245 (286)
178 2bkl_A Prolyl endopeptidase; m 98.5 9.8E-07 3.4E-11 51.6 7.2 71 2-73 123-213 (695)
179 1jof_A Carboxy-CIS,CIS-muconat 98.5 1E-05 3.5E-10 43.9 10.5 72 2-73 147-228 (365)
180 1jof_A Carboxy-CIS,CIS-muconat 98.5 1.2E-06 4.2E-11 47.5 7.0 71 2-72 256-342 (365)
181 1xip_A Nucleoporin NUP159; bet 98.4 8.8E-06 3E-10 45.2 10.0 67 2-73 90-157 (388)
182 3no2_A Uncharacterized protein 98.4 7.1E-06 2.4E-10 43.3 8.8 68 10-80 4-73 (276)
183 3e5z_A Putative gluconolactona 98.4 3.2E-05 1.1E-09 40.7 11.1 77 2-81 174-255 (296)
184 3no2_A Uncharacterized protein 98.3 1.3E-05 4.3E-10 42.4 8.8 73 5-79 130-203 (276)
185 2xdw_A Prolyl endopeptidase; a 98.2 1.8E-05 6.3E-10 46.5 8.8 69 3-71 174-268 (710)
186 3sjl_D Methylamine dehydrogena 98.2 1.7E-05 5.7E-10 44.1 7.9 76 4-79 82-177 (386)
187 2mad_H Methylamine dehydrogena 98.2 0.00011 3.7E-09 40.5 10.7 73 5-78 272-357 (373)
188 3pe7_A Oligogalacturonate lyas 98.2 0.00011 3.8E-09 39.8 10.3 74 4-77 85-183 (388)
189 1xip_A Nucleoporin NUP159; bet 98.2 7.4E-05 2.5E-09 41.6 9.6 69 2-78 129-200 (388)
190 2mad_H Methylamine dehydrogena 98.2 0.00013 4.4E-09 40.2 10.5 73 4-77 70-162 (373)
191 3c5m_A Oligogalacturonate lyas 98.2 5.4E-05 1.9E-09 41.0 9.0 70 2-74 240-332 (396)
192 2hz6_A Endoplasmic reticulum t 98.1 7.2E-06 2.4E-10 44.9 5.5 68 10-79 8-76 (369)
193 1rwi_B Serine/threonine-protei 98.1 4.4E-05 1.5E-09 39.5 8.3 71 2-72 194-265 (270)
194 3dsm_A Uncharacterized protein 98.1 5.2E-05 1.8E-09 40.8 8.4 75 2-79 227-309 (328)
195 2bkl_A Prolyl endopeptidase; m 98.1 4.8E-05 1.6E-09 44.7 8.8 71 3-73 171-263 (695)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 98.1 0.00015 5.2E-09 38.2 9.9 70 2-71 228-299 (314)
197 3g4e_A Regucalcin; six bladed 98.1 0.00017 5.8E-09 38.2 10.5 79 3-81 152-239 (297)
198 1mda_H Methylamine dehydrogena 98.1 0.00017 5.7E-09 39.9 10.0 75 5-80 269-355 (368)
199 1rwi_B Serine/threonine-protei 98.1 0.00013 4.4E-09 37.7 9.0 72 2-73 152-224 (270)
200 3dsm_A Uncharacterized protein 98.0 0.00033 1.1E-08 37.7 10.4 75 3-79 47-122 (328)
201 1qks_A Cytochrome CD1 nitrite 98.0 0.00022 7.7E-09 41.4 9.7 69 10-79 166-237 (567)
202 2qe8_A Uncharacterized protein 97.9 0.00044 1.5E-08 37.4 10.9 80 2-81 69-164 (343)
203 3c75_H MADH, methylamine dehyd 97.9 0.00018 6.1E-09 40.5 8.4 73 5-78 324-409 (426)
204 3c75_H MADH, methylamine dehyd 97.9 0.00011 3.7E-09 41.4 7.4 76 4-79 122-217 (426)
205 1yr2_A Prolyl oligopeptidase; 97.9 0.0001 3.5E-09 43.6 7.6 70 2-73 165-254 (741)
206 3sjl_D Methylamine dehydrogena 97.8 0.00045 1.5E-08 38.5 8.6 71 6-78 39-125 (386)
207 1yiq_A Quinohemoprotein alcoho 97.8 0.00044 1.5E-08 41.0 9.0 61 21-81 455-515 (689)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.00073 2.5E-08 35.6 8.9 76 3-78 175-263 (314)
209 2gop_A Trilobed protease; beta 97.7 0.001 3.6E-08 35.5 9.9 72 5-84 269-342 (347)
210 2dg1_A DRP35, lactonase; beta 97.7 0.0013 4.5E-08 35.0 11.1 71 2-72 89-172 (333)
211 3hrp_A Uncharacterized protein 97.7 0.0017 6E-08 36.2 9.5 70 2-73 133-205 (409)
212 3iuj_A Prolyl endopeptidase; h 97.6 0.00036 1.2E-08 41.2 7.0 68 2-72 131-218 (693)
213 1kb0_A Quinohemoprotein alcoho 97.6 0.0008 2.7E-08 39.9 8.2 59 21-80 457-516 (677)
214 1yr2_A Prolyl oligopeptidase; 97.6 0.0034 1.1E-07 37.4 11.5 71 2-72 270-351 (741)
215 2iwa_A Glutamine cyclotransfer 97.6 0.0019 6.4E-08 34.3 11.4 77 2-79 23-103 (266)
216 3nol_A Glutamine cyclotransfer 97.5 0.0025 8.4E-08 33.9 9.8 76 3-80 46-125 (262)
217 2qe8_A Uncharacterized protein 97.4 0.0024 8.2E-08 34.6 8.1 77 2-79 19-110 (343)
218 2z2n_A Virginiamycin B lyase; 97.4 0.003 1E-07 32.9 10.6 72 2-75 101-174 (299)
219 2ghs_A AGR_C_1268P; regucalcin 97.4 0.004 1.4E-07 33.5 11.7 76 3-79 182-267 (326)
220 3dr2_A Exported gluconolactona 97.3 0.0044 1.5E-07 32.9 10.1 67 2-70 47-115 (305)
221 2z2n_A Virginiamycin B lyase; 97.3 0.0042 1.4E-07 32.4 10.8 69 2-73 59-130 (299)
222 3nok_A Glutaminyl cyclase; bet 97.2 0.0068 2.3E-07 32.3 10.1 75 3-80 58-134 (268)
223 2hz6_A Endoplasmic reticulum t 97.1 0.00059 2E-08 37.4 3.6 71 7-79 126-200 (369)
224 3hrp_A Uncharacterized protein 97.1 0.011 3.8E-07 33.0 9.9 67 2-69 325-408 (409)
225 1mda_H Methylamine dehydrogena 97.1 0.009 3.1E-07 33.1 7.9 66 12-79 33-113 (368)
226 2ece_A 462AA long hypothetical 97.1 0.014 4.7E-07 33.5 9.3 75 4-79 142-245 (462)
227 2qc5_A Streptogramin B lactona 97.0 0.011 3.8E-07 30.8 10.5 71 2-74 64-136 (300)
228 3mbr_X Glutamine cyclotransfer 96.8 0.015 5.3E-07 30.5 10.9 78 2-80 23-103 (243)
229 2iwa_A Glutamine cyclotransfer 96.8 0.019 6.3E-07 30.6 8.5 72 7-79 112-189 (266)
230 2ad6_A Methanol dehydrogenase 96.8 0.023 7.9E-07 33.2 8.1 60 20-80 443-503 (571)
231 3g4e_A Regucalcin; six bladed 96.7 0.02 6.7E-07 30.3 11.4 69 3-75 16-86 (297)
232 3iuj_A Prolyl endopeptidase; h 96.7 0.039 1.3E-06 32.9 10.6 72 2-73 236-316 (693)
233 1flg_A Protein (quinoprotein e 96.7 0.027 9.1E-07 33.1 8.0 60 20-80 465-525 (582)
234 2ghs_A AGR_C_1268P; regucalcin 96.6 0.027 9.2E-07 30.3 10.1 69 3-75 52-122 (326)
235 1fwx_A Nitrous oxide reductase 96.6 0.016 5.3E-07 34.3 6.7 68 3-71 280-361 (595)
236 2qc5_A Streptogramin B lactona 96.6 0.025 8.7E-07 29.4 12.1 68 2-70 190-259 (300)
237 3dr2_A Exported gluconolactona 96.5 0.034 1.2E-06 29.5 7.6 69 2-72 133-225 (305)
238 3mbr_X Glutamine cyclotransfer 96.4 0.037 1.3E-06 29.2 8.3 72 8-79 111-187 (243)
239 3nok_A Glutaminyl cyclase; bet 96.3 0.049 1.7E-06 29.2 8.1 71 9-79 143-218 (268)
240 3q7m_A Lipoprotein YFGL, BAMB; 96.2 0.058 2E-06 29.4 8.0 69 11-80 277-346 (376)
241 3nol_A Glutamine cyclotransfer 96.2 0.053 1.8E-06 28.9 8.0 72 8-79 133-209 (262)
242 1kv9_A Type II quinohemoprotei 96.1 0.06 2E-06 32.1 7.5 60 20-80 437-497 (668)
243 1yiq_A Quinohemoprotein alcoho 95.9 0.13 4.3E-06 31.0 10.1 75 4-78 239-345 (689)
244 1w6s_A Methanol dehydrogenase 95.5 0.18 6.2E-06 29.9 8.4 60 20-80 452-512 (599)
245 3hxj_A Pyrrolo-quinoline quino 95.4 0.12 4.2E-06 27.3 8.1 69 5-79 142-211 (330)
246 3q7m_A Lipoprotein YFGL, BAMB; 95.3 0.15 5.3E-06 27.7 10.1 70 11-80 53-131 (376)
247 1kb0_A Quinohemoprotein alcoho 95.2 0.25 8.7E-06 29.6 9.3 76 4-79 247-354 (677)
248 2xe4_A Oligopeptidase B; hydro 95.1 0.29 1E-05 29.7 8.2 69 4-72 225-305 (751)
249 3tc9_A Hypothetical hydrolase; 95.0 0.23 8E-06 28.1 9.1 68 3-70 229-300 (430)
250 4gq2_M Nucleoporin NUP120; bet 94.8 0.14 4.9E-06 32.0 6.2 37 43-79 237-274 (950)
251 2xe4_A Oligopeptidase B; hydro 94.8 0.062 2.1E-06 32.4 4.5 68 2-72 176-257 (751)
252 2p4o_A Hypothetical protein; p 94.6 0.23 8E-06 26.4 11.8 71 2-74 34-107 (306)
253 4gq2_M Nucleoporin NUP120; bet 94.5 0.19 6.4E-06 31.5 6.2 36 2-37 238-273 (950)
254 3pbp_A Nucleoporin NUP82; beta 94.5 0.36 1.2E-05 27.9 9.7 69 2-71 68-158 (452)
255 1npe_A Nidogen, entactin; glyc 94.1 0.29 9.9E-06 25.4 10.1 75 3-79 170-246 (267)
256 1k3i_A Galactose oxidase precu 94.0 0.53 1.8E-05 28.1 7.6 73 4-76 190-279 (656)
257 1fwx_A Nitrous oxide reductase 93.8 0.13 4.3E-06 30.7 4.3 71 3-73 334-433 (595)
258 1npe_A Nidogen, entactin; glyc 93.8 0.35 1.2E-05 25.1 9.6 69 3-71 39-110 (267)
259 1kv9_A Type II quinohemoprotei 93.7 0.64 2.2E-05 27.9 9.6 74 5-78 235-340 (668)
260 2ad6_A Methanol dehydrogenase 93.6 0.62 2.1E-05 27.5 6.9 69 11-79 115-193 (571)
261 4fhn_B Nucleoporin NUP120; pro 93.3 0.16 5.6E-06 32.3 4.4 35 45-79 241-276 (1139)
262 1k3i_A Galactose oxidase precu 93.1 0.8 2.7E-05 27.3 9.1 73 4-76 247-328 (656)
263 2ece_A 462AA long hypothetical 92.9 0.77 2.6E-05 26.7 7.3 70 9-79 93-181 (462)
264 4fhn_B Nucleoporin NUP120; pro 92.8 0.21 7.2E-06 31.8 4.4 32 5-36 243-274 (1139)
265 4hw6_A Hypothetical protein, I 92.5 0.82 2.8E-05 26.0 7.5 67 4-70 232-303 (433)
266 3kya_A Putative phosphatase; s 92.3 1 3.4E-05 26.4 7.7 67 3-69 250-339 (496)
267 3hxj_A Pyrrolo-quinoline quino 91.9 0.77 2.6E-05 24.3 8.4 66 11-79 107-173 (330)
268 2xzh_A Clathrin heavy chain 1; 91.5 1.1 3.8E-05 25.2 9.8 66 5-70 265-331 (365)
269 3f7f_A Nucleoporin NUP120; nuc 90.9 1.5 5.1E-05 27.1 6.2 34 2-37 224-257 (729)
270 3f7f_A Nucleoporin NUP120; nuc 89.7 0.91 3.1E-05 28.0 4.7 30 50-79 229-258 (729)
271 3qqz_A Putative uncharacterize 89.7 1.4 4.7E-05 23.4 10.3 69 2-71 29-100 (255)
272 1tl2_A L10, protein (tachylect 88.3 1.8 6.1E-05 22.9 6.1 63 2-69 43-114 (236)
273 1bpo_A Protein (clathrin); cla 88.1 2.7 9.2E-05 24.8 10.7 67 4-70 263-330 (494)
274 2fp8_A Strictosidine synthase; 87.7 2 7E-05 22.9 8.7 68 3-72 22-111 (322)
275 3pbp_A Nucleoporin NUP82; beta 87.6 1.7 5.9E-05 25.3 4.7 30 1-30 126-158 (452)
276 2p9w_A MAL S 1 allergenic prot 85.3 3.4 0.00011 23.1 9.8 69 2-71 139-215 (334)
277 2fp8_A Strictosidine synthase; 85.1 3 0.0001 22.3 9.5 69 2-71 128-216 (322)
278 3sov_A LRP-6, low-density lipo 84.2 3.5 0.00012 22.4 9.4 72 3-75 169-242 (318)
279 3tc9_A Hypothetical hydrolase; 82.6 4.9 0.00017 22.8 10.0 71 2-74 181-260 (430)
280 1n7d_A LDL receptor, low-densi 82.3 6.5 0.00022 24.0 7.4 76 3-79 543-622 (699)
281 2be1_A Serine/threonine-protei 81.1 1 3.4E-05 25.0 2.0 62 18-79 64-138 (339)
282 4hw6_A Hypothetical protein, I 80.9 5.9 0.0002 22.6 7.6 72 2-74 184-262 (433)
283 1w6s_A Methanol dehydrogenase 80.2 7.5 0.00026 23.4 10.7 73 6-79 247-350 (599)
284 1flg_A Protein (quinoprotein e 80.1 7.3 0.00025 23.2 9.8 58 21-79 291-363 (582)
285 4a2l_A BT_4663, two-component 79.3 8.6 0.00029 23.6 11.5 71 2-74 408-483 (795)
286 2ism_A Putative oxidoreductase 78.5 6.4 0.00022 21.7 9.3 66 3-71 34-114 (352)
287 1cru_A Protein (soluble quinop 77.7 8 0.00027 22.3 8.1 57 3-59 30-99 (454)
288 3das_A Putative oxidoreductase 77.7 7.2 0.00025 21.8 9.2 67 3-69 35-114 (347)
289 3v65_B Low-density lipoprotein 75.7 8.3 0.00028 21.5 8.2 72 3-74 249-321 (386)
290 3v65_B Low-density lipoprotein 75.3 8.6 0.00029 21.5 9.0 69 2-70 118-189 (386)
291 3sre_A PON1, serum paraoxonase 74.9 8.9 0.00031 21.5 5.3 57 2-59 223-285 (355)
292 1xi4_A Clathrin heavy chain; a 74.2 19 0.00065 24.9 7.0 66 5-70 264-330 (1630)
293 3a9g_A Putative uncharacterize 74.1 9.1 0.00031 21.2 7.0 67 3-71 32-114 (354)
294 3v64_C Agrin; beta propeller, 73.0 9.6 0.00033 20.9 9.1 71 3-73 206-277 (349)
295 2p4o_A Hypothetical protein; p 71.5 9.5 0.00032 20.3 10.7 71 2-72 74-148 (306)
296 3sbq_A Nitrous-oxide reductase 71.0 16 0.00053 22.6 5.7 68 3-71 326-408 (638)
297 3v64_C Agrin; beta propeller, 69.9 12 0.0004 20.6 9.9 69 3-71 76-147 (349)
298 1ijq_A LDL receptor, low-densi 68.2 12 0.00041 20.2 9.7 70 2-71 32-108 (316)
299 1n7d_A LDL receptor, low-densi 68.1 7.7 0.00026 23.7 3.5 70 3-72 409-485 (699)
300 3p5b_L Low density lipoprotein 67.2 15 0.0005 20.7 10.6 71 2-72 114-191 (400)
301 4a2l_A BT_4663, two-component 62.6 24 0.00084 21.7 11.3 71 2-73 359-438 (795)
302 2be1_A Serine/threonine-protei 61.5 19 0.00065 20.1 7.4 65 12-76 11-81 (339)
303 2vpj_A Kelch-like protein 12; 58.6 18 0.00063 19.0 6.6 65 10-74 206-281 (301)
304 3qqz_A Putative uncharacterize 56.0 21 0.00073 19.0 9.3 67 3-69 73-149 (255)
305 2p9w_A MAL S 1 allergenic prot 54.7 27 0.00091 19.7 8.6 68 2-69 65-166 (334)
306 2wg3_C Hedgehog-interacting pr 49.9 21 0.00073 20.8 3.2 26 3-29 17-44 (463)
307 2xn4_A Kelch-like protein 2; s 49.3 28 0.00096 18.3 7.4 67 10-76 204-281 (302)
308 3v9f_A Two-component system se 45.1 53 0.0018 20.3 11.3 69 2-73 452-526 (781)
309 2xzh_A Clathrin heavy chain 1; 44.9 43 0.0015 19.2 9.5 75 5-82 72-147 (365)
310 3ii7_A Kelch-like protein 7; p 43.1 37 0.0013 17.9 7.8 66 10-75 55-131 (306)
311 3v9f_A Two-component system se 42.5 59 0.002 20.1 8.4 67 2-72 409-479 (781)
312 3p5b_L Low density lipoprotein 41.2 48 0.0016 18.7 11.0 68 3-70 162-233 (400)
313 3m0c_C LDL receptor, low-densi 39.5 72 0.0025 20.3 11.1 68 3-70 474-545 (791)
314 1bpo_A Protein (clathrin); cla 38.5 65 0.0022 19.4 6.1 37 43-79 260-297 (494)
315 1q47_A Semaphorin 3A; beta pro 37.7 57 0.0019 19.4 3.6 24 2-25 464-487 (495)
316 3ei3_A DNA damage-binding prot 34.6 1E+02 0.0035 20.7 10.3 63 12-75 524-595 (1158)
317 4a0p_A LRP6, LRP-6, low-densit 33.3 84 0.0029 19.2 10.1 73 3-77 169-243 (628)
318 1ijq_A LDL receptor, low-densi 33.2 60 0.002 17.5 11.1 68 3-70 80-151 (316)
319 3zwu_A Alkaline phosphatase PH 32.7 88 0.003 19.2 8.4 53 4-56 480-546 (592)
320 3amr_A 3-phytase; beta-propell 31.4 76 0.0026 18.1 10.9 66 4-69 132-208 (355)
321 3sov_A LRP-6, low-density lipo 29.8 72 0.0025 17.4 9.9 67 3-70 125-196 (318)
322 3u0a_A Acyl-COA thioesterase I 29.6 64 0.0022 17.5 2.9 10 23-33 255-264 (285)
323 2oqj_C Peptide 2G12.1 (ACPPSHV 29.4 22 0.00076 11.3 1.3 12 65-76 6-17 (26)
324 4gz8_A Semaphorin-3A; multi-do 28.4 96 0.0033 19.5 3.6 26 1-26 471-496 (667)
325 3mwp_A Nucleoprotein; structur 27.4 14 0.00046 21.9 0.1 19 16-34 162-180 (577)
326 3s94_A LRP-6, low-density lipo 26.9 1.1E+02 0.0039 18.7 9.9 69 3-71 352-423 (619)
327 4hvt_A Ritya.17583.B, post-pro 26.1 1E+02 0.0035 19.4 3.5 28 7-34 137-169 (711)
328 1zgk_A Kelch-like ECH-associat 25.7 82 0.0028 16.7 6.7 66 10-75 215-291 (308)
329 2ldu_A Heat shock factor prote 22.8 73 0.0025 15.0 2.3 12 5-16 37-48 (125)
330 2xbg_A YCF48-like protein; pho 22.4 1E+02 0.0035 16.7 8.9 64 2-67 165-230 (327)
331 1uhe_A Aspartate 1-decarboxyla 21.9 71 0.0024 14.5 2.4 17 62-78 17-33 (97)
332 4asc_A Kelch repeat and BTB do 21.6 1E+02 0.0035 16.3 7.2 66 10-75 148-225 (315)
333 1vc3_B L-aspartate-alpha-decar 20.6 76 0.0026 14.4 2.4 17 62-78 18-34 (96)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.86 E-value=2e-20 Score=98.97 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=80.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|+++++++++.|+.+++||..++.....+..|...+.++. ++++..+++++.|+.|++||+.+++++..+.
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 94 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 488999999999999999999999999999999899999999999999 9999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|.+.|
T Consensus 95 ~h~~~v 100 (304)
T 2ynn_A 95 AHPDYI 100 (304)
T ss_dssp CCSSCE
T ss_pred CCCCcE
Confidence 998765
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.86 E-value=3.4e-20 Score=98.93 Aligned_cols=85 Identities=19% Similarity=0.377 Sum_probs=80.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|+++++++++.|+.+++||+..++....+.+|...|.++. +|++..+++++.|+.|++||+++++++..+.
T Consensus 208 ~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 208 PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc
Confidence 478999999999999999999999999999998899999999999999 9999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|.+.|
T Consensus 288 ~h~~~v 293 (321)
T 3ow8_A 288 DHQDQV 293 (321)
T ss_dssp CCSSCE
T ss_pred CCCCcE
Confidence 998765
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.84 E-value=6e-20 Score=100.52 Aligned_cols=85 Identities=19% Similarity=0.229 Sum_probs=80.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|++++|+|++.++++++.|++|++||..+++....+.+|...|.++. +|++..+++++.|+.|++||+.+++++..+.
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~ 189 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH 189 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc
Confidence 588999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 190 ~h~~~V 195 (410)
T 1vyh_C 190 GHDHNV 195 (410)
T ss_dssp CCSSCE
T ss_pred CCCCCE
Confidence 988665
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.84 E-value=1.1e-19 Score=102.06 Aligned_cols=83 Identities=28% Similarity=0.479 Sum_probs=76.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|++++|+|||+++++++.|+.|++|| .+++.+..+.+|...|.+++ +|++..+++++.|+.|++||. +++++..+.
T Consensus 18 ~V~~~a~spdg~~las~~~d~~v~iWd-~~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~ 95 (577)
T 2ymu_A 18 SVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 95 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEC-TTSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEE-CCCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEE
Confidence 489999999999999999999999999 46788889999999999999 999999999999999999995 678888898
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 96 ~~~~~v 101 (577)
T 2ymu_A 96 GHSSSV 101 (577)
T ss_dssp CCSSCE
T ss_pred CCCCCE
Confidence 888765
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.84 E-value=2.6e-19 Score=95.50 Aligned_cols=85 Identities=28% Similarity=0.466 Sum_probs=79.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.|.+++|+|+++++++++.++.+++||+.+++....+.+|...|.++. +|++..+++++.|+.|++||++.+.....+.
T Consensus 166 ~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS 245 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc
Confidence 367899999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 246 ~h~~~v 251 (321)
T 3ow8_A 246 GHASWV 251 (321)
T ss_dssp CCSSCE
T ss_pred CCCCce
Confidence 988765
No 6
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.84 E-value=1.2e-19 Score=98.29 Aligned_cols=71 Identities=17% Similarity=0.186 Sum_probs=66.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
+|++++|+|||+++++|+.|+.|++||+.+++.+..+ .+|...|.+++ +|++..+++++.|++|++|++..
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 4789999999999999999999999999999988875 68999999999 99999999999999999999853
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.83 E-value=3.9e-19 Score=95.75 Aligned_cols=84 Identities=15% Similarity=0.202 Sum_probs=74.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE----EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA----SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
.|.+++|++++ .+++++.+++|++||+.+++... ...+|...|.++. +|++..+++++.|+.|++||+++++++
T Consensus 84 ~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 84 GVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL 162 (344)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 37899999985 57789999999999998876543 3457999999999 999999999999999999999999999
Q ss_pred EeecCCCCCC
Q psy13945 76 CNIQGPTEPV 85 (86)
Q Consensus 76 ~~~~~~~~~v 85 (86)
..+.+|.+.|
T Consensus 163 ~~~~~h~~~V 172 (344)
T 4gqb_B 163 SSYRAHAAQV 172 (344)
T ss_dssp EEECCCSSCE
T ss_pred EEEcCcCCce
Confidence 9999998765
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.83 E-value=2.7e-19 Score=94.67 Aligned_cols=85 Identities=19% Similarity=0.361 Sum_probs=77.8
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC-eEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG-SLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~ 78 (86)
+|.+++|+++++++++++.|+.+++||..+++....+.+|...|.++. +|++..+++++.|+.|++||++++ .....+
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 478899999999999999999999999999999999999999999999 999999999999999999999877 566778
Q ss_pred cCCCCCC
Q psy13945 79 QGPTEPV 85 (86)
Q Consensus 79 ~~~~~~v 85 (86)
.+|...|
T Consensus 137 ~~h~~~v 143 (304)
T 2ynn_A 137 EGHEHFV 143 (304)
T ss_dssp CCCCSCE
T ss_pred cccCCcE
Confidence 8887654
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.83 E-value=1.9e-19 Score=98.52 Aligned_cols=85 Identities=22% Similarity=0.347 Sum_probs=79.8
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|+++++++++.|+++++||+.+++....+.+|...|.++. +|++..+++++.|+.|++||++++.++..+.
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~ 231 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 478999999999999999999999999999888888999999999999 9999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 232 ~h~~~v 237 (410)
T 1vyh_C 232 GHREWV 237 (410)
T ss_dssp CCSSCE
T ss_pred CCCccE
Confidence 887654
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.82 E-value=1.7e-18 Score=92.15 Aligned_cols=84 Identities=21% Similarity=0.432 Sum_probs=76.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|+++++++++.|+++++||+.+++....+.+|...|.++. +|++..+++++.|+.+++||++ +.++..+.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~ 145 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLL 145 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEe
Confidence 478899999999999999999999999999999999999999999999 9999999999999999999986 56677777
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 146 ~h~~~v 151 (319)
T 3frx_A 146 GHNDWV 151 (319)
T ss_dssp CCSSCE
T ss_pred ccCCcE
Confidence 776554
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.82 E-value=1.7e-18 Score=91.59 Aligned_cols=85 Identities=22% Similarity=0.425 Sum_probs=79.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|+++++++++.++.+++|+..+++....+.+|...|.++. +|++..+++++.|+.+++||+++++++..+.
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 104 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK 104 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc
Confidence 478999999999999999999999999999988888899999999999 9999999999999999999999999999998
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 105 ~~~~~v 110 (312)
T 4ery_A 105 GHSNYV 110 (312)
T ss_dssp CCSSCE
T ss_pred CCCCCE
Confidence 887654
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.82 E-value=3.2e-18 Score=90.54 Aligned_cols=85 Identities=21% Similarity=0.397 Sum_probs=79.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.|.+++|+|+++++++++.++.+++||+.+++....+.+|...|.++. +|++..+++++.|+.+++||+++++++..+.
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 146 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 146 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred ceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec
Confidence 478999999999999999999999999999999999999999999999 9999999999999999999999999999998
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
.|...|
T Consensus 147 ~~~~~v 152 (312)
T 4ery_A 147 AHSDPV 152 (312)
T ss_dssp CCSSCE
T ss_pred CCCCcE
Confidence 887654
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.81 E-value=2.3e-18 Score=92.78 Aligned_cols=79 Identities=22% Similarity=0.355 Sum_probs=72.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCC-CeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADD-GTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|.+++|+|+++++++++.|++|++||+.+++.+..+.+|...|.++. ++++ ..+++++.|+.|++||++++++...+
T Consensus 129 ~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee
Confidence 478999999999999999999999999999999999999999999999 8876 47789999999999999998877766
Q ss_pred c
Q psy13945 79 Q 79 (86)
Q Consensus 79 ~ 79 (86)
.
T Consensus 209 ~ 209 (344)
T 4gqb_B 209 G 209 (344)
T ss_dssp C
T ss_pred e
Confidence 4
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.81 E-value=4.9e-18 Score=91.57 Aligned_cols=85 Identities=21% Similarity=0.371 Sum_probs=77.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC--CCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA--DDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|.+++|+|++..+++++.|+++++||+.+++....+.+|...|.++. .| ++..+++++.|+.+++||+++++++..
T Consensus 156 ~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 367899999999999999999999999999999999999999999988 66 467999999999999999999999999
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
+.+|...|
T Consensus 236 ~~~h~~~v 243 (354)
T 2pbi_B 236 FETHESDV 243 (354)
T ss_dssp ECCCSSCE
T ss_pred ecCCCCCe
Confidence 99988765
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.81 E-value=3.4e-18 Score=91.37 Aligned_cols=85 Identities=18% Similarity=0.314 Sum_probs=74.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccC----CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC--e
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRT----GTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG--S 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~--~ 73 (86)
+|.+++|+|+++++++++.|+++++||+.. .+....+.+|...|.++. +|++..+++++.|+.|++|+...+ +
T Consensus 109 ~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~ 188 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWE 188 (330)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCee
Confidence 478999999999999999999999999843 244667788999999999 999999999999999999998776 6
Q ss_pred EEEeecCCCCCC
Q psy13945 74 LKCNIQGPTEPV 85 (86)
Q Consensus 74 ~~~~~~~~~~~v 85 (86)
++..+.+|...|
T Consensus 189 ~~~~~~~h~~~v 200 (330)
T 2hes_X 189 CVAVLNGHEGTV 200 (330)
T ss_dssp EEEEECCCSSCE
T ss_pred EEEEccCCCCcE
Confidence 788888888765
No 16
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.80 E-value=2.9e-18 Score=91.21 Aligned_cols=85 Identities=24% Similarity=0.432 Sum_probs=73.8
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCc--eEEEEeCCccceEEEE-eC--CCCeEEEEeCCCCEEEEeCCCC--e
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGT--SLASWKGHEGEILQLV-TA--DDGTLISSSLDQTISAWHTNDG--S 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~-~~--~~~~~~~~~~~~~i~~~~~~~~--~ 73 (86)
+|.+++|+|+++++++++.|+++++||+.++. ....+.+|...|.++. ++ ++..+++++.|+++++||++++ .
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE 94 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce
Confidence 48899999999999999999999999998764 3567889999999999 65 4889999999999999999876 4
Q ss_pred EEEeecCCCCCC
Q psy13945 74 LKCNIQGPTEPV 85 (86)
Q Consensus 74 ~~~~~~~~~~~v 85 (86)
....+.+|...|
T Consensus 95 ~~~~~~~h~~~V 106 (316)
T 3bg1_A 95 KSHEHAGHDSSV 106 (316)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEccCCCCce
Confidence 667778887765
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.80 E-value=4e-18 Score=90.77 Aligned_cols=85 Identities=24% Similarity=0.349 Sum_probs=75.6
Q ss_pred CeeEEEECCCC-CEEEEEeCCCeEEEEEccC-----CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 1 LIRCIAVSSSG-SWIAIGQASGVLTLLDLRT-----GTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 1 ~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
+|.+++|+|++ +++++++.|+++++|++.. +.....+.+|...|.++. ++++..+++++.|+.|++||+++++
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~ 98 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE 98 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 47899999965 8999999999999999763 234567889999999999 9999999999999999999999999
Q ss_pred EEEeecCCCCCC
Q psy13945 74 LKCNIQGPTEPV 85 (86)
Q Consensus 74 ~~~~~~~~~~~v 85 (86)
++..+.+|...|
T Consensus 99 ~~~~~~~h~~~v 110 (319)
T 3frx_A 99 TYQRFVGHKSDV 110 (319)
T ss_dssp EEEEEECCSSCE
T ss_pred eeEEEccCCCcE
Confidence 999999998765
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.80 E-value=5.2e-18 Score=90.97 Aligned_cols=85 Identities=19% Similarity=0.292 Sum_probs=75.5
Q ss_pred CeeEEEE-----CC-CCCEEEEEeCCCeEEEEEccCC-------ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEE
Q psy13945 1 LIRCIAV-----SS-SGSWIAIGQASGVLTLLDLRTG-------TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISA 66 (86)
Q Consensus 1 ~i~~~~~-----~~-~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~ 66 (86)
+|++++| ++ +++++++++.|+++++||+... .....+.+|...|.++. +|++..+++++.|+.+++
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~l 102 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRL 102 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEE
Confidence 4789999 66 8999999999999999998643 34566788999999999 999999999999999999
Q ss_pred EeCCCCeEEEeecCCCCCC
Q psy13945 67 WHTNDGSLKCNIQGPTEPV 85 (86)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~v 85 (86)
||+++++++..+.+|...|
T Consensus 103 wd~~~~~~~~~~~~h~~~v 121 (343)
T 2xzm_R 103 WDLRTGTTYKRFVGHQSEV 121 (343)
T ss_dssp EETTSSCEEEEEECCCSCE
T ss_pred EECCCCcEEEEEcCCCCcE
Confidence 9999999999999998765
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.79 E-value=1e-17 Score=91.23 Aligned_cols=79 Identities=24% Similarity=0.447 Sum_probs=73.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
|.+++|+|+++++++++.|+.+++||+.+++....+.+|...|.++. +|++..+++++.|+.+++||++++++...+..
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc
Confidence 78999999999999999999999999999998889999999999999 99999999999999999999999988776653
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.79 E-value=5.1e-18 Score=89.57 Aligned_cols=85 Identities=16% Similarity=0.276 Sum_probs=71.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccC--CceEEEEeCCccceEEEE-eC--CCCeEEEEeCCCCEEEEeCCCCe--
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRT--GTSLASWKGHEGEILQLV-TA--DDGTLISSSLDQTISAWHTNDGS-- 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~v~~~~-~~--~~~~~~~~~~~~~i~~~~~~~~~-- 73 (86)
+|.+++|+|+|+++++++.|+++++||+.. .+....+.+|...|.++. ++ ++..+++++.|++|++||++++.
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS 90 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE
Confidence 478999999999999999999999999864 356788899999999999 65 37899999999999999998763
Q ss_pred EEEeecCCCCCC
Q psy13945 74 LKCNIQGPTEPV 85 (86)
Q Consensus 74 ~~~~~~~~~~~v 85 (86)
.+..+.+|...|
T Consensus 91 ~~~~~~~h~~~v 102 (297)
T 2pm7_B 91 QIAVHAVHSASV 102 (297)
T ss_dssp CCEEECCCSSCE
T ss_pred EEEEeecCCCce
Confidence 455666676554
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.78 E-value=1.8e-17 Score=89.08 Aligned_cols=85 Identities=18% Similarity=0.342 Sum_probs=73.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCc--eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC---eE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGT--SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG---SL 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~---~~ 74 (86)
+|.+++|+|+++++++++.|+.+++|+...+. ....+.+|...|.++. +|++..+++++.|+.+++||++.+ .+
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~ 142 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC 142 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEE
T ss_pred cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEE
Confidence 47899999999999999999999999987653 4677889999999999 999999999999999999999765 45
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
+..+.+|...|
T Consensus 143 ~~~~~~h~~~v 153 (345)
T 3fm0_A 143 VSVLNSHTQDV 153 (345)
T ss_dssp EEEECCCCSCE
T ss_pred EEEecCcCCCe
Confidence 66777777654
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.1e-17 Score=88.31 Aligned_cols=85 Identities=24% Similarity=0.308 Sum_probs=68.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccC-------CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC-
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRT-------GTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTND- 71 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~- 71 (86)
+|.+++|+|+++++++++.|+++++||... .+....+.+|...|.++. +|++..+++++.|+.+++||++.
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~ 139 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES 139 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTT
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCC
Confidence 478999999999999999999999999842 344567788999999999 99999999999999999999943
Q ss_pred ---CeEEEeecCCCCCC
Q psy13945 72 ---GSLKCNIQGPTEPV 85 (86)
Q Consensus 72 ---~~~~~~~~~~~~~v 85 (86)
.+++..+.+|...|
T Consensus 140 ~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 140 GEEYECISVLQEHSQDV 156 (330)
T ss_dssp CCCCEEEEEECCCSSCE
T ss_pred CCCeEEEEEeccCCCce
Confidence 35777888887655
No 23
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.78 E-value=2.8e-17 Score=89.54 Aligned_cols=81 Identities=19% Similarity=0.309 Sum_probs=76.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|+++++++++.++.+++||+.+++....+.+|...|.++. +|++..+++++.|+.+++||+++++++..+.
T Consensus 141 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEee
Confidence 478999999999999999999999999999998889999999999999 9999999999999999999999999998887
Q ss_pred CC
Q psy13945 80 GP 81 (86)
Q Consensus 80 ~~ 81 (86)
.|
T Consensus 221 ~~ 222 (420)
T 3vl1_A 221 RK 222 (420)
T ss_dssp BT
T ss_pred cC
Confidence 54
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.78 E-value=1.4e-17 Score=89.41 Aligned_cols=85 Identities=16% Similarity=0.264 Sum_probs=73.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE---EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC--eE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA---SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG--SL 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~--~~ 74 (86)
.|.+++|+|+++++++++.|++|++||...+.... ...+|...|.++. +|++..+++++.|+.+++|+...+ ++
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 36789999999999999999999999998775432 2257889999999 999999999999999999998866 56
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
+..+.+|...|
T Consensus 98 ~~~~~~h~~~v 108 (345)
T 3fm0_A 98 VTTLEGHENEV 108 (345)
T ss_dssp EEEECCCSSCE
T ss_pred EEEccCCCCCc
Confidence 78888898765
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.78 E-value=4.1e-17 Score=87.47 Aligned_cols=79 Identities=15% Similarity=0.250 Sum_probs=73.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|+++++++++.|+.+++||+.++.....+.+|...|.++. +|++..+++++.|+.+++||++.+..+..+.
T Consensus 186 ~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 265 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 478999999999999999999999999999999899999999999999 9999999999999999999999888776664
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.78 E-value=3.2e-17 Score=87.93 Aligned_cols=72 Identities=24% Similarity=0.467 Sum_probs=67.7
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+|.+++|+|++.++++++.|+++++||+.+++....+.+|...|.++. +|++..+++++.|+.|++||+...
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE 150 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC
Confidence 478999999999999999999999999999999999999999999999 999999999999999999998743
No 27
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.78 E-value=4.1e-17 Score=86.38 Aligned_cols=85 Identities=16% Similarity=0.380 Sum_probs=74.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCC----ceEEEEeCCccceEEEE-eC--CCCeEEEEeCCCCEEEEeCCCC-
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTG----TSLASWKGHEGEILQLV-TA--DDGTLISSSLDQTISAWHTNDG- 72 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~~~-~~--~~~~~~~~~~~~~i~~~~~~~~- 72 (86)
+|++++|+|+++++++++.++.+++||+.++ +....+.+|...|.++. +| ++..+++++.|+.|++||++.+
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTS
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCc
Confidence 5889999999999999999999999999865 35567788999999999 88 5899999999999999999876
Q ss_pred --------eEEEeecCCCCCC
Q psy13945 73 --------SLKCNIQGPTEPV 85 (86)
Q Consensus 73 --------~~~~~~~~~~~~v 85 (86)
+.+..+.+|...|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~v 113 (351)
T 3f3f_A 93 EECSGRRWNKLCTLNDSKGSL 113 (351)
T ss_dssp CTTSSCSEEEEEEECCCSSCE
T ss_pred ccccccCcceeeeecccCCce
Confidence 6677787887654
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.78 E-value=3.3e-17 Score=87.54 Aligned_cols=79 Identities=15% Similarity=0.254 Sum_probs=74.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|++++|+|+++++++++.++.+++||+.+++....+.+|...|.++. +|++..+++++.|+.|++||+.+++++..+.
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 113 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK 113 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 488999999999999999999999999999999999999999999999 9999999999999999999999998887776
No 29
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.77 E-value=2.2e-17 Score=89.96 Aligned_cols=85 Identities=21% Similarity=0.391 Sum_probs=73.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCC------------ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTG------------TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAW 67 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~ 67 (86)
+|.+++|+|+++++++++.|+.+++||+... .....+.+|...|.++. ++++..+++++.|+.+++|
T Consensus 258 ~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iw 337 (393)
T 1erj_A 258 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW 337 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 3789999999999999999999999998653 23456778999999999 8999999999999999999
Q ss_pred eCCCCeEEEeecCCCCCC
Q psy13945 68 HTNDGSLKCNIQGPTEPV 85 (86)
Q Consensus 68 ~~~~~~~~~~~~~~~~~v 85 (86)
|.++++++..+.+|.+.|
T Consensus 338 d~~~~~~~~~l~~h~~~v 355 (393)
T 1erj_A 338 DKKSGNPLLMLQGHRNSV 355 (393)
T ss_dssp ETTTCCEEEEEECCSSCE
T ss_pred ECCCCeEEEEECCCCCCE
Confidence 999999999999998765
No 30
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.77 E-value=2.4e-17 Score=92.70 Aligned_cols=83 Identities=28% Similarity=0.473 Sum_probs=76.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+||++++++++.++.+++|| .+++....+.+|...|.++. +|++.++++++.|+.|++||. +++++..+.
T Consensus 469 ~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~ 546 (577)
T 2ymu_A 469 SVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 546 (577)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE
T ss_pred CEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEc
Confidence 478999999999999999999999999 46778888999999999999 999999999999999999995 688899999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|.+.|
T Consensus 547 ~h~~~v 552 (577)
T 2ymu_A 547 GHSSSV 552 (577)
T ss_dssp CCSSCE
T ss_pred CCCCCE
Confidence 998775
No 31
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.77 E-value=3.8e-17 Score=88.97 Aligned_cols=85 Identities=16% Similarity=0.303 Sum_probs=76.5
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCC-------ceEEEEeCCccceEEEE-eCCC-CeEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTG-------TSLASWKGHEGEILQLV-TADD-GTLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~v~~~~-~~~~-~~~~~~~~~~~i~~~~~~ 70 (86)
+|.+++|+| +++++++++.|+.+++||+.++ +....+.+|...|.++. +|++ ..+++++.|+.|++||++
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 162 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG 162 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC
Confidence 478999999 8999999999999999999876 55778889999999999 9997 689999999999999999
Q ss_pred CCeEEEee--cCCCCCC
Q psy13945 71 DGSLKCNI--QGPTEPV 85 (86)
Q Consensus 71 ~~~~~~~~--~~~~~~v 85 (86)
+++++..+ .+|...|
T Consensus 163 ~~~~~~~~~~~~~~~~v 179 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTI 179 (402)
T ss_dssp TTEEEEEECTTTCCSCE
T ss_pred CCCccEEEecCCCCCce
Confidence 99999988 7787654
No 32
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.77 E-value=2e-17 Score=88.70 Aligned_cols=84 Identities=19% Similarity=0.465 Sum_probs=76.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.++.|++++. +++++.|+.+++||+.+++....+.+|...|.++. +|++..+++++.|+.+++||++++.+...+.
T Consensus 145 ~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~ 223 (340)
T 1got_B 145 YLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223 (340)
T ss_dssp CEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred cEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc
Confidence 367888888765 78889999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 224 ~h~~~v 229 (340)
T 1got_B 224 GHESDI 229 (340)
T ss_dssp CCSSCE
T ss_pred CCcCCE
Confidence 888765
No 33
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.77 E-value=2.9e-17 Score=86.60 Aligned_cols=82 Identities=13% Similarity=0.179 Sum_probs=70.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe--CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK--GHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
.++++|++++ ++++| .|++|++||..+++....+. +|...|.++. +|++..+++++.|+.|++|++++++++..+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 3578999876 66655 58999999999999877665 5667899999 999999999999999999999999999999
Q ss_pred cCCCCCC
Q psy13945 79 QGPTEPV 85 (86)
Q Consensus 79 ~~~~~~v 85 (86)
.+|...+
T Consensus 106 ~~h~~~~ 112 (318)
T 4ggc_A 106 TSHSARV 112 (318)
T ss_dssp ECCSSCE
T ss_pred cCccceE
Confidence 9887643
No 34
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.77 E-value=3.1e-17 Score=98.54 Aligned_cols=85 Identities=27% Similarity=0.405 Sum_probs=80.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.|.+++|+|+++++++++.++.|++||..+++....+.+|...|.++. +|++..+++++.|+.|++||+.+++++..+.
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 478999999999999999999999999999999999999999999999 9999999999999999999999999999998
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 697 ~~~~~v 702 (1249)
T 3sfz_A 697 EHSEQV 702 (1249)
T ss_dssp CCSSCE
T ss_pred CCCCcE
Confidence 887654
No 35
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.77 E-value=4.9e-17 Score=92.68 Aligned_cols=85 Identities=14% Similarity=0.174 Sum_probs=76.9
Q ss_pred CeeEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|.+++|+|++. .+++++.|+++++||..+++....+.+|...|.++. +|++..+++++.|+.|++||..++++...+
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence 478999999987 699999999999999988888888999999999999 999999999999999999999999888887
Q ss_pred c-------CCCCCC
Q psy13945 79 Q-------GPTEPV 85 (86)
Q Consensus 79 ~-------~~~~~v 85 (86)
. +|.+.|
T Consensus 229 ~~~~~~~~~h~~~V 242 (611)
T 1nr0_A 229 EDDSLKNVAHSGSV 242 (611)
T ss_dssp BCTTSSSCSSSSCE
T ss_pred ccccccccccCCCE
Confidence 4 677654
No 36
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.76 E-value=3.2e-17 Score=95.04 Aligned_cols=85 Identities=16% Similarity=0.214 Sum_probs=80.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|+++++++++.++.|++||..+++....+.+|...|.++. +|++..+++++.|+.|++|++.+++.+..+.
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 94 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 478999999999999999999999999999999999999999999999 9999999999999999999999999999998
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|.+.|
T Consensus 95 ~~~~~v 100 (814)
T 3mkq_A 95 AHPDYI 100 (814)
T ss_dssp CCSSCE
T ss_pred cCCCCE
Confidence 888765
No 37
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.76 E-value=4.5e-17 Score=87.88 Aligned_cols=72 Identities=13% Similarity=0.310 Sum_probs=67.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCe-EEEEEccCCceEEEEe-C-CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGV-LTLLDLRTGTSLASWK-G-HEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~-~-~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+|.+++|+|+++++++++.|++ +++||+.+++.+..+. + |...|.++. +|++..+++++.|+.+++||++..
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 4789999999999999999998 9999999999998888 5 899999999 999999999999999999999754
No 38
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.76 E-value=5e-17 Score=87.78 Aligned_cols=84 Identities=17% Similarity=0.184 Sum_probs=73.9
Q ss_pred CeeEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCC-CeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADD-GTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
.+.+++|+|++ .++++++.++.|++||+.+++....+.++...|.++. +|++ .++++++.|+.|++||+++++++..
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 36789999975 6889999999999999999999899999999999999 8876 5788999999999999999988876
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
+ +|.+.|
T Consensus 308 ~-~H~~~V 314 (357)
T 4g56_B 308 L-SHRDFV 314 (357)
T ss_dssp C-CCSSCE
T ss_pred C-CCCCCE
Confidence 5 687765
No 39
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.76 E-value=7.5e-17 Score=91.91 Aligned_cols=80 Identities=23% Similarity=0.403 Sum_probs=72.8
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe-------CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK-------GHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+|.+++|+||++++++++.|+++++||..+++....+. +|...|.++. +|++..+++++.|+++++||++++
T Consensus 192 ~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 192 FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 47899999999999999999999999999888877773 7899999999 999999999999999999999999
Q ss_pred eEEEeecC
Q psy13945 73 SLKCNIQG 80 (86)
Q Consensus 73 ~~~~~~~~ 80 (86)
+++..+..
T Consensus 272 ~~~~~~~~ 279 (611)
T 1nr0_A 272 KVEKTIPV 279 (611)
T ss_dssp EEEEEEEC
T ss_pred ceeeeecC
Confidence 88877653
No 40
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.75 E-value=8.8e-17 Score=87.29 Aligned_cols=85 Identities=16% Similarity=0.279 Sum_probs=72.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCc-------cceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHE-------GEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+|.+++|+|+++++++++.|+++++||+.+++....+..+. ..+.++. +|++..+++++.|+.+++||...+
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC
T ss_pred CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC
Confidence 47899999999999999999999999999988877665432 2478899 999999999999999999999988
Q ss_pred eEEEee----cCCCCCC
Q psy13945 73 SLKCNI----QGPTEPV 85 (86)
Q Consensus 73 ~~~~~~----~~~~~~v 85 (86)
+.+..+ .+|...|
T Consensus 331 ~~~~~~~~~~~~h~~~v 347 (380)
T 3iz6_a 331 EMVLNLGTLQNSHEGRI 347 (380)
T ss_dssp CEEEEECCSCSSCCCCC
T ss_pred ceEEEEecccCCCCCce
Confidence 888776 5677665
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=4.8e-17 Score=87.25 Aligned_cols=85 Identities=19% Similarity=0.309 Sum_probs=74.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEcc--CCceEEEEeCCccceEEEE-eCC--CCeEEEEeCCCCEEEEeCCCCe--
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLR--TGTSLASWKGHEGEILQLV-TAD--DGTLISSSLDQTISAWHTNDGS-- 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~-~~~--~~~~~~~~~~~~i~~~~~~~~~-- 73 (86)
+|.+++|+|+++++++++.++.+++||+. +.+....+.+|...|.++. +++ +..+++++.|+.|++||+.++.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 92 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee
Confidence 58899999999999999999999999987 5566678888999999999 776 8999999999999999999886
Q ss_pred EEEeecCCCCCC
Q psy13945 74 LKCNIQGPTEPV 85 (86)
Q Consensus 74 ~~~~~~~~~~~v 85 (86)
....+..|...|
T Consensus 93 ~~~~~~~~~~~v 104 (379)
T 3jrp_A 93 QIAVHAVHSASV 104 (379)
T ss_dssp EEEEECCCSSCE
T ss_pred EeeeecCCCcce
Confidence 677777776654
No 42
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.75 E-value=1.5e-16 Score=85.77 Aligned_cols=85 Identities=21% Similarity=0.229 Sum_probs=74.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC--ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH--EGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|.+++|+|++.++++++.|+++++||+...+....+..+ ...+.++. +|++..+++++.|+.|++||+.++..+..
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~ 321 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSI 321 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEE
Confidence 4789999999999999999999999999887776665543 34678888 89999999999999999999999999999
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
+.+|.+.|
T Consensus 322 l~~h~~~v 329 (354)
T 2pbi_B 322 LFGHENRV 329 (354)
T ss_dssp ECCCSSCE
T ss_pred EECCCCcE
Confidence 99998765
No 43
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.75 E-value=5.1e-17 Score=91.65 Aligned_cols=85 Identities=20% Similarity=0.285 Sum_probs=78.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeC-CccceEEEE-eC----------CCCeEEEEeCCCCEEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKG-HEGEILQLV-TA----------DDGTLISSSLDQTISAWH 68 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~-~~----------~~~~~~~~~~~~~i~~~~ 68 (86)
+|.+++|+|+++++++++.++.+++||+.+++....+.+ |...|.++. +| ++..+++++.|+.|++|+
T Consensus 490 ~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~ 569 (615)
T 1pgu_A 490 KPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYS 569 (615)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEE
T ss_pred ceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEE
Confidence 478999999999999999999999999999998888887 999999999 99 999999999999999999
Q ss_pred CCCC-eEEEeecCCCCCC
Q psy13945 69 TNDG-SLKCNIQGPTEPV 85 (86)
Q Consensus 69 ~~~~-~~~~~~~~~~~~v 85 (86)
+.++ +++..+.+|...|
T Consensus 570 ~~~~~~~~~~~~~h~~~v 587 (615)
T 1pgu_A 570 VKRPMKIIKALNAHKDGV 587 (615)
T ss_dssp SSCTTCCEEETTSSTTCE
T ss_pred CCCCceechhhhcCccce
Confidence 9987 7888898898765
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.74 E-value=1.1e-16 Score=85.52 Aligned_cols=84 Identities=20% Similarity=0.361 Sum_probs=76.4
Q ss_pred eeEEEECCC----CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 2 IRCIAVSSS----GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 2 i~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
|.+++|+|+ ++++++++.++.+++||..+++....+.+|...|.++. +| ++..+++++.|+.|++||+++++.+
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 151 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV 151 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE
Confidence 788999998 67999999999999999999999999999999999999 88 8999999999999999999999988
Q ss_pred Eee---cCCCCCC
Q psy13945 76 CNI---QGPTEPV 85 (86)
Q Consensus 76 ~~~---~~~~~~v 85 (86)
..+ .+|...|
T Consensus 152 ~~~~~~~~~~~~v 164 (366)
T 3k26_A 152 AIFGGVEGHRDEV 164 (366)
T ss_dssp EEECSTTSCSSCE
T ss_pred EEecccccccCce
Confidence 887 5676554
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.74 E-value=2.6e-16 Score=85.73 Aligned_cols=84 Identities=13% Similarity=0.219 Sum_probs=76.5
Q ss_pred CeeEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEE--eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 1 LIRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASW--KGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
+|.+++|+|++ .++++++.|+.+++||+.+++....+ ..|...|.++. +|++..+++++.|+.+++||+++++.+.
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 212 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVA 212 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceee
Confidence 47899999998 69999999999999999999988888 77899999999 9999999999999999999999999998
Q ss_pred ee-cCCCCC
Q psy13945 77 NI-QGPTEP 84 (86)
Q Consensus 77 ~~-~~~~~~ 84 (86)
.+ .+|.+.
T Consensus 213 ~~~~~~~~~ 221 (402)
T 2aq5_A 213 EKDRPHEGT 221 (402)
T ss_dssp EEECSSCSS
T ss_pred eeccCCCCC
Confidence 88 677653
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.74 E-value=2.1e-16 Score=91.04 Aligned_cols=85 Identities=20% Similarity=0.293 Sum_probs=75.5
Q ss_pred CeeEEEECCCC-CEEEEEeCCCeEEEEEccCC-----ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 1 LIRCIAVSSSG-SWIAIGQASGVLTLLDLRTG-----TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 1 ~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
.|++++|++++ .++++++.|++|++|++... .....+.+|...|.++. ++++..+++++.|+.|++||+.++.
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~ 463 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV 463 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 47899999865 78999999999999998653 33567889999999999 9999999999999999999999999
Q ss_pred EEEeecCCCCCC
Q psy13945 74 LKCNIQGPTEPV 85 (86)
Q Consensus 74 ~~~~~~~~~~~v 85 (86)
+...+.+|...|
T Consensus 464 ~~~~~~~h~~~v 475 (694)
T 3dm0_A 464 STRRFVGHTKDV 475 (694)
T ss_dssp EEEEEECCSSCE
T ss_pred ceeEEeCCCCCE
Confidence 999999998765
No 47
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.73 E-value=8.3e-17 Score=86.26 Aligned_cols=85 Identities=9% Similarity=0.059 Sum_probs=72.8
Q ss_pred CeeEEEECC--CCCEEEEEeCCCeEEEEEccCCceEEEEeC-CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE-
Q psy13945 1 LIRCIAVSS--SGSWIAIGQASGVLTLLDLRTGTSLASWKG-HEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK- 75 (86)
Q Consensus 1 ~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~- 75 (86)
+|.+++|+| +++++++++.|+.+++||+.+++....... +...+.++. +|++..+++++.|+.|++||+++++..
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS 206 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc
Confidence 478999999 999999999999999999998888665543 455789999 999999999999999999999998877
Q ss_pred EeecC-CCCCC
Q psy13945 76 CNIQG-PTEPV 85 (86)
Q Consensus 76 ~~~~~-~~~~v 85 (86)
..+.. |...|
T Consensus 207 ~~~~~~h~~~v 217 (343)
T 3lrv_A 207 SRFPVDEEAKI 217 (343)
T ss_dssp EECCCCTTSCE
T ss_pred cEEeccCCCCE
Confidence 77777 87665
No 48
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.73 E-value=4.5e-18 Score=91.65 Aligned_cols=85 Identities=8% Similarity=0.075 Sum_probs=70.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCC--ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe---E
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTG--TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS---L 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~---~ 74 (86)
+|.+++|+|+++++++++.++.+++||..++ +....+.+|...|.++. +|++..+++++.|+.+++||+.++. .
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceee
Confidence 4788999999999999999999999999887 66778888999999999 9999999999999999999998876 6
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
...+.+|...|
T Consensus 93 ~~~~~~~~~~v 103 (377)
T 3dwl_C 93 TLVLLRLNRAA 103 (377)
T ss_dssp EEECCCCSSCE
T ss_pred eeEecccCCce
Confidence 66676776654
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.2e-16 Score=87.59 Aligned_cols=84 Identities=15% Similarity=0.383 Sum_probs=74.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe-CCccceEEEE-e----CCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK-GHEGEILQLV-T----ADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~v~~~~-~----~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
+|.+++|+|+++++++++.++.+++||+..++....+. .+...|.++. + +++..+++++.|+.|++||++++++
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 47899999999999999999999999999988888776 6777899995 4 4677899999999999999999999
Q ss_pred EEeecCCCCC
Q psy13945 75 KCNIQGPTEP 84 (86)
Q Consensus 75 ~~~~~~~~~~ 84 (86)
+..+.+|...
T Consensus 296 ~~~~~~~~~~ 305 (437)
T 3gre_A 296 QYAFINSDEQ 305 (437)
T ss_dssp EEEEESSSSC
T ss_pred EEEEEcCCCC
Confidence 9999887644
No 50
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.73 E-value=2.6e-16 Score=85.18 Aligned_cols=79 Identities=25% Similarity=0.399 Sum_probs=74.4
Q ss_pred CeeEEEECCCCCEEEEEeCC---CeEEEEEccCCceEEEEeC-------------CccceEEEE-eCCCCeEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQAS---GVLTLLDLRTGTSLASWKG-------------HEGEILQLV-TADDGTLISSSLDQT 63 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~-------------~~~~v~~~~-~~~~~~~~~~~~~~~ 63 (86)
+|.+++|+|+++++++++.+ +.+++||+.+++....+.. |...|.++. +|++..+++++.|+.
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 314 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK 314 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCe
Confidence 47899999999999999999 9999999999998888888 899999999 999999999999999
Q ss_pred EEEEeCCCCeEEEeec
Q psy13945 64 ISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 64 i~~~~~~~~~~~~~~~ 79 (86)
|++||+++++++..+.
T Consensus 315 i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 315 LRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEEcCCCceeEEEe
Confidence 9999999999999988
No 51
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.73 E-value=1.5e-16 Score=85.94 Aligned_cols=78 Identities=21% Similarity=0.322 Sum_probs=70.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCC-eEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDG-TLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|.+++|+|+++++++++.++.|++||..+++....+.+|...|.++. ++++. .+++++.|+.|++||++++++...+
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~ 220 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI 220 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBC
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeee
Confidence 478999999999999999999999999999999999999999999999 88764 7889999999999999887765544
No 52
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.73 E-value=4.4e-16 Score=84.57 Aligned_cols=80 Identities=21% Similarity=0.323 Sum_probs=71.6
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEcc-CCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLR-TGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
|.+++|++ ++.++++++.|+.+++||+. ..+....+.+|...|.++. +|++..+++++.|+.+++||++++.++..+
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 67888876 78999999999999999987 4566778889999999999 999999999999999999999999988877
Q ss_pred cCC
Q psy13945 79 QGP 81 (86)
Q Consensus 79 ~~~ 81 (86)
..+
T Consensus 288 ~~~ 290 (380)
T 3iz6_a 288 NRE 290 (380)
T ss_dssp CCC
T ss_pred ccc
Confidence 654
No 53
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.73 E-value=2.8e-16 Score=83.94 Aligned_cols=84 Identities=19% Similarity=0.408 Sum_probs=72.3
Q ss_pred CeeEEEECCC---CCEEEEEeCCCeEEEEEccC-CceE-EEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 1 LIRCIAVSSS---GSWIAIGQASGVLTLLDLRT-GTSL-ASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 1 ~i~~~~~~~~---~~~~~~~~~~~~v~~~~~~~-~~~~-~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
+|.+++|+|+ ++++++++.++.+++||+.+ +... ..+.+|...|.++. +|++..+++++.|+.+++||++++..
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 120 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA 120 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCc
Confidence 4889999999 59999999999999999986 5444 67788999999999 99999999999999999999999887
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
.... .|...|
T Consensus 121 ~~~~-~~~~~v 130 (368)
T 3mmy_A 121 IQIA-QHDAPV 130 (368)
T ss_dssp EEEE-ECSSCE
T ss_pred eeec-cccCce
Confidence 7643 465544
No 54
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.72 E-value=4.9e-16 Score=89.49 Aligned_cols=73 Identities=30% Similarity=0.531 Sum_probs=68.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
.|.+++|+|+++++++++.|++|++||+.++.....+.+|...|.++. +|++..+++++.|+.|++||.....
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~ 505 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC 505 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc
Confidence 478999999999999999999999999999999999999999999999 9999999999999999999986543
No 55
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.72 E-value=3.1e-16 Score=86.36 Aligned_cols=78 Identities=18% Similarity=0.202 Sum_probs=64.7
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCCce--EEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTS--LASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
.|++++|+| ++.++++|+.||.|++||+.+++. ...+.+|...|.++. +| ++..+++++.|++|++||++.+...
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 389999999 567899999999999999876654 344568999999999 87 6889999999999999999876544
Q ss_pred Eee
Q psy13945 76 CNI 78 (86)
Q Consensus 76 ~~~ 78 (86)
...
T Consensus 201 ~~~ 203 (435)
T 4e54_B 201 VFA 203 (435)
T ss_dssp EEE
T ss_pred EEe
Confidence 333
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.72 E-value=1.2e-15 Score=80.74 Aligned_cols=85 Identities=22% Similarity=0.339 Sum_probs=75.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCc--eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGT--SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|.+++|+|+++++++++.++.+++||...++ ....+..+...+.++. +|++..+++++.++.+++||+++++.+..
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~ 178 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 178 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeee
Confidence 37899999999999999999999999998776 4566778888999999 99999999999999999999999999999
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
+..|...|
T Consensus 179 ~~~~~~~i 186 (337)
T 1gxr_A 179 FQGHTDGA 186 (337)
T ss_dssp ECCCSSCE
T ss_pred eecccCce
Confidence 98887654
No 57
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.72 E-value=1e-15 Score=81.27 Aligned_cols=82 Identities=20% Similarity=0.306 Sum_probs=70.2
Q ss_pred CeeEEEECCC-CCEEEEEeCCCeEEEEEccCCc-----eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 1 LIRCIAVSSS-GSWIAIGQASGVLTLLDLRTGT-----SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 1 ~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
+|++++|+|+ ++++++++.|++|++||+...+ ....+.+|...|.++. +|++..+++++.|+.+++|+.....
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~ 119 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGT 119 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccc
Confidence 5899999997 5899999999999999987543 3566788999999999 9999999999999999999998887
Q ss_pred EEEeecCCC
Q psy13945 74 LKCNIQGPT 82 (86)
Q Consensus 74 ~~~~~~~~~ 82 (86)
.......+.
T Consensus 120 ~~~~~~~~~ 128 (340)
T 4aow_A 120 TTRRFVGHT 128 (340)
T ss_dssp EEEEEECCS
T ss_pred eeeeecCCC
Confidence 766655443
No 58
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.72 E-value=5.8e-16 Score=83.06 Aligned_cols=84 Identities=15% Similarity=0.268 Sum_probs=73.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCc--eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGT--SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|.+++|+|+++++++++.++.+++||..+++ ....+.+|...|.++. +|++..+++++.|+.+++||+++++....
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee
Confidence 57899999999999999999999999998887 7788889999999999 99999999999999999999988865443
Q ss_pred e--cCCCCC
Q psy13945 78 I--QGPTEP 84 (86)
Q Consensus 78 ~--~~~~~~ 84 (86)
+ ..|...
T Consensus 90 ~~~~~~~~~ 98 (372)
T 1k8k_C 90 LVILRINRA 98 (372)
T ss_dssp EECCCCSSC
T ss_pred EEeecCCCc
Confidence 3 455544
No 59
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.6e-16 Score=94.02 Aligned_cols=84 Identities=8% Similarity=0.087 Sum_probs=70.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCc---------------------------------------------eEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGT---------------------------------------------SLA 35 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------------------------------------~~~ 35 (86)
+|.+++|+||++++++|+.|++|++|++.+++ +..
T Consensus 490 ~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 569 (902)
T 2oaj_A 490 AVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPST 569 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEE
T ss_pred ceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeE
Confidence 47899999999999999999999999987652 255
Q ss_pred EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE-----eec-CCCCCC
Q psy13945 36 SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC-----NIQ-GPTEPV 85 (86)
Q Consensus 36 ~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~-~~~~~v 85 (86)
.+.+|...|.+++ +|++ .+++++.|++|++||+++...+. .+. +|.+.|
T Consensus 570 ~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V 625 (902)
T 2oaj_A 570 AVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACV 625 (902)
T ss_dssp EECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCE
T ss_pred EEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccce
Confidence 6778999999999 9999 99999999999999998877654 232 676655
No 60
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.71 E-value=6.7e-16 Score=84.65 Aligned_cols=82 Identities=13% Similarity=0.181 Sum_probs=70.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe--CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK--GHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
++.++|+++ +.+++| .|++|++||..+++....+. .|...|.+++ +|++..+++|+.|+.|++||+++++++..+
T Consensus 108 ~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 185 (420)
T ss_dssp CBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE
Confidence 467899975 466665 48999999999998877665 5667899999 999999999999999999999999999999
Q ss_pred cCCCCCC
Q psy13945 79 QGPTEPV 85 (86)
Q Consensus 79 ~~~~~~v 85 (86)
.+|...+
T Consensus 186 ~~h~~~v 192 (420)
T 4gga_A 186 TSHSARV 192 (420)
T ss_dssp CCCSSCE
T ss_pred eCCCCce
Confidence 9987654
No 61
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.71 E-value=6.2e-16 Score=81.86 Aligned_cols=81 Identities=22% Similarity=0.328 Sum_probs=68.2
Q ss_pred CeeEEEECCCC----CEEEEEeCCCeEEEEEccCC---------------------------------------------
Q psy13945 1 LIRCIAVSSSG----SWIAIGQASGVLTLLDLRTG--------------------------------------------- 31 (86)
Q Consensus 1 ~i~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~--------------------------------------------- 31 (86)
+|.+++|+|++ +++++++.|+.+++||+..+
T Consensus 216 ~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (351)
T 3f3f_A 216 LIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQ 295 (351)
T ss_dssp CEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEE
T ss_pred ceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeeccccc
Confidence 47899999998 89999999999999998764
Q ss_pred -ceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC---eEEEeecCC
Q psy13945 32 -TSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG---SLKCNIQGP 81 (86)
Q Consensus 32 -~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~ 81 (86)
+....+.+|...|.++. +|++..+++++.|+.|++|++.++ .++..+..|
T Consensus 296 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 350 (351)
T 3f3f_A 296 VELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVITAQ 350 (351)
T ss_dssp EEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEEEC--
T ss_pred ccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhheeehccc
Confidence 44566778899999999 999999999999999999999876 455555544
No 62
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.71 E-value=9.2e-16 Score=92.28 Aligned_cols=85 Identities=25% Similarity=0.322 Sum_probs=78.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC--CCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA--DDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|.+++|+|+++++++++.++.+++||..+++....+.+|...|.++. ++ +...+++++.|+.+++||++++.++..
T Consensus 659 ~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~ 738 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNT 738 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEE
T ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhe
Confidence 478999999999999999999999999999999999999999999999 77 556788999999999999999999999
Q ss_pred ecCCCCCC
Q psy13945 78 IQGPTEPV 85 (86)
Q Consensus 78 ~~~~~~~v 85 (86)
+.+|.+.|
T Consensus 739 ~~~h~~~v 746 (1249)
T 3sfz_A 739 MFGHTNSV 746 (1249)
T ss_dssp ECCCSSCE
T ss_pred ecCCCCCE
Confidence 99998765
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.71 E-value=2.6e-16 Score=85.71 Aligned_cols=83 Identities=24% Similarity=0.280 Sum_probs=75.4
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
....|+++++++++++.++.+++||+.+++....+.+|...|.++. +|++..+++++.|+.|++||+++++.+..+.+|
T Consensus 101 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h 180 (420)
T 3vl1_A 101 AVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH 180 (420)
T ss_dssp EEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC
T ss_pred EEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC
Confidence 3457899999999999999999999998888777788999999999 999999999999999999999999988888888
Q ss_pred CCCC
Q psy13945 82 TEPV 85 (86)
Q Consensus 82 ~~~v 85 (86)
...|
T Consensus 181 ~~~v 184 (420)
T 3vl1_A 181 RATV 184 (420)
T ss_dssp SSCE
T ss_pred CCcE
Confidence 8765
No 64
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.70 E-value=1.6e-16 Score=85.16 Aligned_cols=76 Identities=9% Similarity=0.125 Sum_probs=67.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceE-EEEeC-CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSL-ASWKG-HEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~-~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+.+++|+|++.++++|+.++.|++||+.+++.. ..+.. |...|.++. +|++..+++++.+ .|++||++.+..+..+
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAY 251 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceee
Confidence 678999999999999999999999999988877 77777 899999999 9999999999955 9999999987655443
No 65
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.70 E-value=1e-15 Score=81.44 Aligned_cols=85 Identities=15% Similarity=0.154 Sum_probs=75.6
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCC------ceEEEEeCCcc---------ceEEEE-eCCCCeEEEEeCCCC
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTG------TSLASWKGHEG---------EILQLV-TADDGTLISSSLDQT 63 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~------~~~~~~~~~~~---------~v~~~~-~~~~~~~~~~~~~~~ 63 (86)
++.+++|+| +++.+++++.++.+++|+.... +....+..|.. .|.++. +|++..+++++.|+.
T Consensus 195 ~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 274 (342)
T 1yfq_A 195 QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI 274 (342)
T ss_dssp CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC
T ss_pred ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce
Confidence 478999999 9999999999999999999876 66677777755 899999 999999999999999
Q ss_pred EEEEeCCCCeEEEeecCC-CCCC
Q psy13945 64 ISAWHTNDGSLKCNIQGP-TEPV 85 (86)
Q Consensus 64 i~~~~~~~~~~~~~~~~~-~~~v 85 (86)
|++||+++++.+..+.+| ...|
T Consensus 275 i~vwd~~~~~~~~~~~~~h~~~v 297 (342)
T 1yfq_A 275 ISCWNLQTRKKIKNFAKFNEDSV 297 (342)
T ss_dssp EEEEETTTTEEEEECCCCSSSEE
T ss_pred EEEEcCccHhHhhhhhcccCCCc
Confidence 999999999999999887 6654
No 66
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.70 E-value=7.5e-16 Score=83.47 Aligned_cols=84 Identities=14% Similarity=0.130 Sum_probs=72.1
Q ss_pred eeEEEECCCCCEEEEEeCCC----eEEEEEccCCce----EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASG----VLTLLDLRTGTS----LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~----~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
|.+++|+|+++.+++++.++ .++.|+...... ...+.+|...|.+++ +|++.++++++.|+.|++||++++
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 67899999999999988776 688888775543 345677889999999 999999999999999999999999
Q ss_pred eEEEee-cCCCCCC
Q psy13945 73 SLKCNI-QGPTEPV 85 (86)
Q Consensus 73 ~~~~~~-~~~~~~v 85 (86)
+++..+ .+|...|
T Consensus 302 ~~~~~~~~gH~~~V 315 (365)
T 4h5i_A 302 SMSKIFKQAHSFAI 315 (365)
T ss_dssp EEEEEETTSSSSCE
T ss_pred cEEEEecCcccCCE
Confidence 999875 7898776
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.70 E-value=6.8e-16 Score=82.79 Aligned_cols=85 Identities=12% Similarity=0.110 Sum_probs=75.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEc------------------cCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDL------------------RTGTSLASWKGHEGEILQLV-TADDGTLISSSLD 61 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~------------------~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~ 61 (86)
.|.+++|+|+++++++++.++.+++||+ ..++....+..|...+.++. +|++..+++++.|
T Consensus 144 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 223 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD 223 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred CeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC
Confidence 4789999999999999999999999995 35677777888899999999 9999999999999
Q ss_pred CCEEEEeCCCCeEEEeecCCCCCC
Q psy13945 62 QTISAWHTNDGSLKCNIQGPTEPV 85 (86)
Q Consensus 62 ~~i~~~~~~~~~~~~~~~~~~~~v 85 (86)
+.+++||+++++++..+..|...|
T Consensus 224 ~~i~i~d~~~~~~~~~~~~~~~~v 247 (372)
T 1k8k_C 224 STVCLADADKKMAVATLASETLPL 247 (372)
T ss_dssp TEEEEEEGGGTTEEEEEECSSCCE
T ss_pred CEEEEEECCCCceeEEEccCCCCe
Confidence 999999999999999888887554
No 68
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.70 E-value=1.4e-16 Score=86.91 Aligned_cols=78 Identities=10% Similarity=0.035 Sum_probs=65.6
Q ss_pred CeeEEEECC--------CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCC-CeEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSS--------SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADD-GTLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~-~~~~~~~~~~~i~~~~~~ 70 (86)
+|.+++|+| |+++|++++.|+++++||+.++.....+..+...+.++. +|++ ..+++++.|+.|++||++
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence 478999987 889999999999999999988888888888889999999 9986 478999999999999998
Q ss_pred CCeEEEee
Q psy13945 71 DGSLKCNI 78 (86)
Q Consensus 71 ~~~~~~~~ 78 (86)
+++.....
T Consensus 218 t~~~~~~~ 225 (393)
T 4gq1_A 218 LNLSAEEN 225 (393)
T ss_dssp CCC-----
T ss_pred CCcccccc
Confidence 87655443
No 69
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.70 E-value=9.5e-16 Score=80.57 Aligned_cols=83 Identities=28% Similarity=0.536 Sum_probs=75.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
++.+++|+|++. +++++.++.+++||+.+++....+.+|...+.++. +|++ .+++++.|+.|++||+++++....+.
T Consensus 186 ~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~ 263 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVIT 263 (313)
T ss_dssp CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEE
T ss_pred cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEe
Confidence 478899999988 88999999999999999999999999999999999 8988 68899999999999999999999988
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
.|...|
T Consensus 264 ~~~~~i 269 (313)
T 3odt_A 264 LPAISI 269 (313)
T ss_dssp CSSSCE
T ss_pred ccCceE
Confidence 887554
No 70
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.69 E-value=7.3e-16 Score=81.24 Aligned_cols=71 Identities=25% Similarity=0.355 Sum_probs=64.0
Q ss_pred eeEEEECCCCCEEEEEe--CCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQ--ASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+..+.|++++..+++++ .++.|++||..+++.+..+.+|...|.+++ +|++..+++++.|++|++||+.+.
T Consensus 243 v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 243 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred eeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 56788999888776544 789999999999999999999999999999 999999999999999999998754
No 71
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.69 E-value=1.8e-15 Score=79.87 Aligned_cols=85 Identities=12% Similarity=0.313 Sum_probs=71.0
Q ss_pred CeeEEEECCC--CCEEEEEeCCCeEEEEEccCCc--eEEEEeCCccceEEEE-eCC-------------CCeEEEEeCCC
Q psy13945 1 LIRCIAVSSS--GSWIAIGQASGVLTLLDLRTGT--SLASWKGHEGEILQLV-TAD-------------DGTLISSSLDQ 62 (86)
Q Consensus 1 ~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~-~~~-------------~~~~~~~~~~~ 62 (86)
+|.+++|+|+ +.++++++.|+.+++||+.... ....+.+|...|.++. +|+ +..+++++.|+
T Consensus 101 ~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~ 180 (297)
T 2pm7_B 101 SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN 180 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTS
T ss_pred ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC
Confidence 4789999997 8899999999999999987653 2456678889999999 876 46899999999
Q ss_pred CEEEEeCCCCe----EEEeecCCCCCC
Q psy13945 63 TISAWHTNDGS----LKCNIQGPTEPV 85 (86)
Q Consensus 63 ~i~~~~~~~~~----~~~~~~~~~~~v 85 (86)
.|++||++++. ....+.+|.+.|
T Consensus 181 ~v~lwd~~~~~~~~~~~~~l~~H~~~V 207 (297)
T 2pm7_B 181 LVKIWKYNSDAQTYVLESTLEGHSDWV 207 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred cEEEEEEcCCCceEEEEEEecCCCCce
Confidence 99999998754 567788888765
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.69 E-value=1.4e-16 Score=85.81 Aligned_cols=85 Identities=7% Similarity=0.082 Sum_probs=65.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCc---eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe---
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGT---SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS--- 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~--- 73 (86)
+|.+++|+|+++++++++.|+.+++||+.+++ ....+..|...|.++. +|++..+++++.|+.+++||++.+.
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 136 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW 136 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce
Confidence 47899999999999999999999999998776 5666778999999999 9999999999999999999998876
Q ss_pred EEEeecC-CCCCC
Q psy13945 74 LKCNIQG-PTEPV 85 (86)
Q Consensus 74 ~~~~~~~-~~~~v 85 (86)
....+.. |...|
T Consensus 137 ~~~~~~~~h~~~v 149 (377)
T 3dwl_C 137 VSKHLKRPLRSTI 149 (377)
T ss_dssp CCEEECSSCCSCE
T ss_pred eeeEeecccCCCe
Confidence 3666666 76654
No 73
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.69 E-value=1.3e-15 Score=86.66 Aligned_cols=82 Identities=17% Similarity=0.290 Sum_probs=68.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCce-------EEEE----eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS-------LASW----KGHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~~~~----~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
+.+++|+|||+++++|+.|++|++||+..+.. +.++ .+|...|.+++ +|++ +++++.|+.+++|++
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~ 209 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTV 209 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECC
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEEC
Confidence 78999999999999999999999999987752 4565 45678999999 9998 889999999999999
Q ss_pred CCCeE---EEee-cCCCCCC
Q psy13945 70 NDGSL---KCNI-QGPTEPV 85 (86)
Q Consensus 70 ~~~~~---~~~~-~~~~~~v 85 (86)
..+.. .+.+ .+|...|
T Consensus 210 ~~~~~~~~~~tL~~~h~~~V 229 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRKI 229 (588)
T ss_dssp CSSSSCCCEEEEECCCSSCC
T ss_pred CCCccccceeeecccccCcE
Confidence 87663 3456 3676555
No 74
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.69 E-value=8.7e-16 Score=89.13 Aligned_cols=85 Identities=19% Similarity=0.361 Sum_probs=78.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC-eEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG-SLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~ 78 (86)
+|.+++|+|+++++++++.++.+++||..+++....+.+|...|.++. +|++..+++++.|+.+++|++.++ .....+
T Consensus 57 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 136 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE
Confidence 478999999999999999999999999999999999999999999999 999999999999999999999876 777788
Q ss_pred cCCCCCC
Q psy13945 79 QGPTEPV 85 (86)
Q Consensus 79 ~~~~~~v 85 (86)
.+|...|
T Consensus 137 ~~~~~~v 143 (814)
T 3mkq_A 137 EGHEHFV 143 (814)
T ss_dssp ECCSSCE
T ss_pred cCCCCcE
Confidence 8887654
No 75
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.69 E-value=5.6e-16 Score=84.95 Aligned_cols=75 Identities=24% Similarity=0.317 Sum_probs=65.8
Q ss_pred eeEEEECCCCCEEEEEe--CCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQ--ASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
+.++.|++++..+++++ .++.|++||..+++.+..+.+|...|.+++ +|++..+++++.|++|++||+....+..
T Consensus 323 v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 323 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-
T ss_pred eeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccc
Confidence 56788999998877654 789999999999999999999999999999 9999999999999999999987654333
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.69 E-value=6.6e-15 Score=79.90 Aligned_cols=82 Identities=23% Similarity=0.396 Sum_probs=73.7
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|++.++++++.++.+++|| .+++....+..|...|.++. +|++..+++++.++.+++||++++..+..+.
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 478999999999999999999999999 66777888888999999999 9999999999999999999999999888887
Q ss_pred CCCC
Q psy13945 80 GPTE 83 (86)
Q Consensus 80 ~~~~ 83 (86)
.+..
T Consensus 189 ~~~~ 192 (425)
T 1r5m_A 189 LKET 192 (425)
T ss_dssp CC--
T ss_pred cccc
Confidence 6654
No 77
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.68 E-value=5.6e-16 Score=90.20 Aligned_cols=85 Identities=19% Similarity=0.309 Sum_probs=74.8
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEcc--CCceEEEEeCCccceEEEE-eCC--CCeEEEEeCCCCEEEEeCCCCe--
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLR--TGTSLASWKGHEGEILQLV-TAD--DGTLISSSLDQTISAWHTNDGS-- 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~-~~~--~~~~~~~~~~~~i~~~~~~~~~-- 73 (86)
+|++++|+|+++++++++.++.|++||.. ++.....+.+|...|.++. +++ +..+++++.|+.|++||+.++.
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~ 90 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 90 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc
Confidence 58899999999999999999999999987 4556778889999999999 777 8999999999999999999886
Q ss_pred EEEeecCCCCCC
Q psy13945 74 LKCNIQGPTEPV 85 (86)
Q Consensus 74 ~~~~~~~~~~~v 85 (86)
....+.+|...|
T Consensus 91 ~~~~~~~h~~~V 102 (753)
T 3jro_A 91 QIAVHAVHSASV 102 (753)
T ss_dssp EEEEECCCSSCE
T ss_pred ccccccCCCCCe
Confidence 667777787654
No 78
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.68 E-value=3e-15 Score=82.61 Aligned_cols=80 Identities=21% Similarity=0.454 Sum_probs=72.1
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
.++.+ ++.++++++.|+.|++||..+++....+.+|...|.++. ++++ .+++++.|+.|++||+++++++..+.+|
T Consensus 126 ~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h 202 (464)
T 3v7d_B 126 TCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGH 202 (464)
T ss_dssp EEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCC
Confidence 45555 678999999999999999999999999999999999999 7777 8999999999999999999999999988
Q ss_pred CCCC
Q psy13945 82 TEPV 85 (86)
Q Consensus 82 ~~~v 85 (86)
.+.|
T Consensus 203 ~~~v 206 (464)
T 3v7d_B 203 NSTV 206 (464)
T ss_dssp SSCE
T ss_pred CCcc
Confidence 8765
No 79
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.68 E-value=1.9e-15 Score=82.85 Aligned_cols=74 Identities=19% Similarity=0.418 Sum_probs=63.7
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCc-----------eEEEEeCCc------------cceEEEE-eCCC--Ce
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGT-----------SLASWKGHE------------GEILQLV-TADD--GT 54 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~------------~~v~~~~-~~~~--~~ 54 (86)
+|++++|+|+++++++|+.++.|++||..++. ....+.+|. ..|.++. +|++ ..
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~ 109 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQ 109 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcce
Confidence 48899999999999999999999999988766 467788887 8899999 8887 78
Q ss_pred EEEEeCCCCEEEEeCCCCeE
Q psy13945 55 LISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 55 ~~~~~~~~~i~~~~~~~~~~ 74 (86)
+++++.|+.|++|++..+..
T Consensus 110 l~s~s~d~~i~iw~~~~~~~ 129 (447)
T 3dw8_B 110 FLLSTNDKTIKLWKISERDK 129 (447)
T ss_dssp EEEEECSSCEEEEEEEEEEE
T ss_pred EEEeCCCCeEEEEecccccC
Confidence 99999999999999876443
No 80
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.68 E-value=3e-16 Score=83.88 Aligned_cols=75 Identities=19% Similarity=0.329 Sum_probs=68.1
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEE---eCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASW---KGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+|.+++|+| ++.++++++.++.|++||+.+++....+ ..|...|.++. +|++..+++++.|+.+++||+++++..
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHH
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccc
Confidence 478999999 8999999999999999999998888877 67889999999 999999999999999999999876544
No 81
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.68 E-value=3.9e-15 Score=81.63 Aligned_cols=77 Identities=17% Similarity=0.209 Sum_probs=69.8
Q ss_pred ECCCCCEEEEEeCCCeEEEEEccCCceEEEEeC--CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec-CCC
Q psy13945 7 VSSSGSWIAIGQASGVLTLLDLRTGTSLASWKG--HEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ-GPT 82 (86)
Q Consensus 7 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~ 82 (86)
+++++.++++++.++.+++||+.+++....+.. |...|.++. +|++..+++++.|+.|++||+++++++..+. .|.
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 257 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH 257 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC
Confidence 567899999999999999999999999988888 789999999 9999999999999999999999999988775 454
Q ss_pred C
Q psy13945 83 E 83 (86)
Q Consensus 83 ~ 83 (86)
.
T Consensus 258 ~ 258 (437)
T 3gre_A 258 A 258 (437)
T ss_dssp E
T ss_pred C
Confidence 3
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.68 E-value=2.1e-15 Score=81.56 Aligned_cols=83 Identities=27% Similarity=0.421 Sum_probs=72.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCC-eEEEEeCCCCEEEEeCCC----CeE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDG-TLISSSLDQTISAWHTND----GSL 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~----~~~ 74 (86)
+|.+++|+|+++.+++++.++.+++||+ .++....+.+|...|.++. +|++. .+++++.|+.|++||+++ +.+
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 243 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSY 243 (383)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCE
T ss_pred CeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccce
Confidence 3789999999999999999999999998 5777888889999999999 99988 899999999999999987 566
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
+..+ +|...|
T Consensus 244 ~~~~-~~~~~v 253 (383)
T 3ei3_B 244 IAEM-PHEKPV 253 (383)
T ss_dssp EEEE-ECSSCE
T ss_pred EEEe-cCCCce
Confidence 6666 465543
No 83
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.67 E-value=6.5e-15 Score=83.14 Aligned_cols=85 Identities=15% Similarity=0.100 Sum_probs=77.4
Q ss_pred CeeEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeCCcc---ceEEEE-eCC-CCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 1 LIRCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKGHEG---EILQLV-TAD-DGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 1 ~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
+|.+++|+|+++ .+++++.++.+++||..+++....+.+|.. .|.++. +|+ +..+++++.++.+++||+++++.
T Consensus 162 ~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 241 (615)
T ss_dssp CEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE
T ss_pred cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE
Confidence 478999999997 899999999999999999999889998888 999999 999 99999999999999999999999
Q ss_pred EEee-c---CCCCCC
Q psy13945 75 KCNI-Q---GPTEPV 85 (86)
Q Consensus 75 ~~~~-~---~~~~~v 85 (86)
+..+ . .|...|
T Consensus 242 ~~~~~~~~~~~~~~v 256 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGI 256 (615)
T ss_dssp EEECCBTTBCCCSCE
T ss_pred eEEecccccccCCce
Confidence 9888 5 777654
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.67 E-value=4.7e-15 Score=80.47 Aligned_cols=84 Identities=20% Similarity=0.344 Sum_probs=76.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|.+++|+|+++++++++.++.+++||+..++....+..+...+.++. +|++ .+++++.++.+++||+++++.+..+.
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~ 327 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI 327 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc
Confidence 478999999999999999999999999998888888888999999999 9988 99999999999999999999998888
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
.|...|
T Consensus 328 ~~~~~i 333 (425)
T 1r5m_A 328 VDGVPI 333 (425)
T ss_dssp CTTCCE
T ss_pred cCCccE
Confidence 876554
No 85
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.66 E-value=4.9e-15 Score=77.88 Aligned_cols=84 Identities=13% Similarity=0.038 Sum_probs=73.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC---eEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG---SLKC 76 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~---~~~~ 76 (86)
+|.+++| ++++++++++.++.+++||..+++....+..|...+.++. +|++..+++++.|+.+++|++... +...
T Consensus 20 ~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~ 98 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLY 98 (313)
T ss_dssp CEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-C
T ss_pred CcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCccc
Confidence 4789999 9999999999999999999998888888888999999999 999999999999999999998653 5566
Q ss_pred eecCCCCCC
Q psy13945 77 NIQGPTEPV 85 (86)
Q Consensus 77 ~~~~~~~~v 85 (86)
.+.+|...|
T Consensus 99 ~~~~~~~~i 107 (313)
T 3odt_A 99 TLIGHQGNV 107 (313)
T ss_dssp EECCCSSCE
T ss_pred chhhcccCE
Confidence 777776654
No 86
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.66 E-value=3.1e-15 Score=85.12 Aligned_cols=82 Identities=15% Similarity=0.268 Sum_probs=67.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCcc-----ceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe-
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEG-----EILQLV-TADDGTLISSSLDQTISAWHTNDGS- 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~- 73 (86)
+|.+++|+|||..+++++.++.+++||... .+..+. |.. .+.+++ +|+++.+++++.|++|++|++..+.
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTT
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 488999999999999999999999999543 445555 544 499999 9999999999999999999998874
Q ss_pred ------EEEee----cCCCCCC
Q psy13945 74 ------LKCNI----QGPTEPV 85 (86)
Q Consensus 74 ------~~~~~----~~~~~~v 85 (86)
.+..+ .+|.+.|
T Consensus 164 ~~~~~i~l~ti~~~~~gh~~~V 185 (588)
T 2j04_A 164 NTPEFYFESSIRLSDAGSKDWV 185 (588)
T ss_dssp TCCCCEEEEEEECSCTTCCCCE
T ss_pred ccccceeeeeeecccccccccE
Confidence 35665 5565554
No 87
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.66 E-value=4.9e-15 Score=81.76 Aligned_cols=80 Identities=29% Similarity=0.444 Sum_probs=74.1
Q ss_pred EECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCCCC
Q psy13945 6 AVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQGPTEP 84 (86)
Q Consensus 6 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 84 (86)
+++++++.+++++.++.+++||+.+++....+.+|...+.++. +|++..+++++.|+.|++||+++++++..+.+|...
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~ 354 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 354 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc
Confidence 3466789999999999999999999999999999999999999 999999999999999999999999999999999876
Q ss_pred C
Q psy13945 85 V 85 (86)
Q Consensus 85 v 85 (86)
|
T Consensus 355 v 355 (464)
T 3v7d_B 355 V 355 (464)
T ss_dssp E
T ss_pred E
Confidence 5
No 88
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.66 E-value=9.7e-15 Score=80.85 Aligned_cols=80 Identities=13% Similarity=0.144 Sum_probs=68.5
Q ss_pred CeeEEEECCC-CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSS-GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|.+++|+|+ +.++++++.|+++++||+.++.......+|...+.++. +|++..+++++.|+.|++||.+ +.....+
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~ 229 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVI 229 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEE
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccccc
Confidence 4789999997 78999999999999999998876666677888999999 9999999999999999999998 5555544
Q ss_pred cCC
Q psy13945 79 QGP 81 (86)
Q Consensus 79 ~~~ 81 (86)
..|
T Consensus 230 ~~~ 232 (434)
T 2oit_A 230 PCP 232 (434)
T ss_dssp CCC
T ss_pred cCC
Confidence 433
No 89
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.66 E-value=1.7e-14 Score=76.40 Aligned_cols=79 Identities=19% Similarity=0.297 Sum_probs=73.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.|.+++|+|+++.+++++.++.+++||+.+++....+..|...+.++. +|++..+++++.++.+++||+++++.+..+.
T Consensus 143 ~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 222 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD 222 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec
Confidence 368899999999999999999999999999998888888999999999 9999999999999999999999988877664
No 90
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.66 E-value=2.1e-15 Score=81.96 Aligned_cols=85 Identities=22% Similarity=0.345 Sum_probs=75.3
Q ss_pred CeeEEEECCCC-CEEEEEeCCC---eEEEEEccCC-ceEEEEe-CCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSG-SWIAIGQASG---VLTLLDLRTG-TSLASWK-GHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~-~~~~~~~~~~---~v~~~~~~~~-~~~~~~~-~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+|.+++|+|++ .++++++.++ .+++||+..+ .....+. +|...+.++. +| ++..+++++.|+.+++||++++
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 37899999997 6899999998 9999999876 5566677 8899999999 88 8999999999999999999999
Q ss_pred eEEEeecCCCCCC
Q psy13945 73 SLKCNIQGPTEPV 85 (86)
Q Consensus 73 ~~~~~~~~~~~~v 85 (86)
+++..+.+|...|
T Consensus 296 ~~~~~~~~~~~~v 308 (416)
T 2pm9_A 296 EQLSQFPARGNWC 308 (416)
T ss_dssp CEEEEEECSSSCC
T ss_pred ccceeecCCCCce
Confidence 9999998887765
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.66 E-value=3.4e-15 Score=80.83 Aligned_cols=79 Identities=18% Similarity=0.242 Sum_probs=72.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeC---C---ccceEEEE-eCCCCeEEEEeCC---CCEEEEeCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKG---H---EGEILQLV-TADDGTLISSSLD---QTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~---~~~v~~~~-~~~~~~~~~~~~~---~~i~~~~~~ 70 (86)
.|.+++|+|++ .+++++.++.+++||+.+++....+.. | ...+.++. +|++..+++++.| +.|++||++
T Consensus 188 ~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 188 FATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE 266 (397)
T ss_dssp CCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 36789999999 999999999999999999998888888 8 89999999 9999999999999 999999999
Q ss_pred CCeEEEeecC
Q psy13945 71 DGSLKCNIQG 80 (86)
Q Consensus 71 ~~~~~~~~~~ 80 (86)
+++.+..+.+
T Consensus 267 ~~~~~~~~~~ 276 (397)
T 1sq9_A 267 FGERIGSLSV 276 (397)
T ss_dssp TCCEEEEECB
T ss_pred CCcccceecc
Confidence 9999988887
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.66 E-value=2.3e-15 Score=83.11 Aligned_cols=78 Identities=14% Similarity=0.198 Sum_probs=71.0
Q ss_pred CeeEEEECCC---CCEEEEEeCCCeEEEEEccCCceEEE-EeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 1 LIRCIAVSSS---GSWIAIGQASGVLTLLDLRTGTSLAS-WKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 1 ~i~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+|.+++|+|+ ++++++++.|+.|++||+.+++.... +.+|...|.++. + ++..+++++.|+.|++||+++++++
T Consensus 197 ~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 197 MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEE
T ss_pred ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEe
Confidence 4789999999 99999999999999999998887776 558999999999 8 9999999999999999999999888
Q ss_pred Eeec
Q psy13945 76 CNIQ 79 (86)
Q Consensus 76 ~~~~ 79 (86)
..+.
T Consensus 276 ~~~~ 279 (450)
T 2vdu_B 276 STFD 279 (450)
T ss_dssp EEEE
T ss_pred eeec
Confidence 7775
No 93
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.65 E-value=7.6e-15 Score=79.39 Aligned_cols=82 Identities=10% Similarity=0.108 Sum_probs=58.3
Q ss_pred eEEEECC---CCCEEEEEeCCCeEEEEEccCCceEEEEeCCcc---ceEEEE-e--------------------------
Q psy13945 3 RCIAVSS---SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEG---EILQLV-T-------------------------- 49 (86)
Q Consensus 3 ~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~~-~-------------------------- 49 (86)
..++|++ ++.++++++.|++|++||+.+++.+.++.++.. .+.++. +
T Consensus 182 ~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp CEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE
T ss_pred eeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 4566666 668899999999999999999998888765321 221111 1
Q ss_pred -------------------CCCC------------eEEEEeCCCCEEEEeCCCCeEEEeecCCCCC
Q psy13945 50 -------------------ADDG------------TLISSSLDQTISAWHTNDGSLKCNIQGPTEP 84 (86)
Q Consensus 50 -------------------~~~~------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 84 (86)
|++. .+++++.|++|++||+.+++++.++.+|.+.
T Consensus 262 IklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~ 327 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ 327 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--C
T ss_pred EEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC
Confidence 2222 3567778999999999999999999888654
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.65 E-value=4.8e-15 Score=78.84 Aligned_cols=84 Identities=14% Similarity=0.112 Sum_probs=71.3
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCc---eEEEEeCCccceEEEE-eCCCC-eEEEEeCCCCEEEEeC-CCCeE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGT---SLASWKGHEGEILQLV-TADDG-TLISSSLDQTISAWHT-NDGSL 74 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~-~~~~~ 74 (86)
+|.+++|+|++.++++++.++.+++|++..+. .......|...|.++. +|++. .+++++.|+.|++|++ ..+..
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 92 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF 92 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce
Confidence 48899999999999999999999999998766 3445567889999999 99999 9999999999999999 77654
Q ss_pred EEeecC--CCCCC
Q psy13945 75 KCNIQG--PTEPV 85 (86)
Q Consensus 75 ~~~~~~--~~~~v 85 (86)
..+.+ |...|
T Consensus 93 -~~~~~~~~~~~v 104 (342)
T 1yfq_A 93 -QALTNNEANLGI 104 (342)
T ss_dssp -EECBSCCCCSCE
T ss_pred -EeccccCCCCce
Confidence 55666 76654
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.65 E-value=3.5e-15 Score=80.69 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=68.2
Q ss_pred CeeEEEECCCCC-EEEEEeCCCeEEEEEccC----CceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 1 LIRCIAVSSSGS-WIAIGQASGVLTLLDLRT----GTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 1 ~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
+|.+++|+|+++ ++++++.|+.+++||+.+ +.....+ +|...+.++. +| ++..+++++.|+.+++||++++.
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 478999999998 999999999999999987 4455554 6889999999 99 99999999999999999998876
Q ss_pred EEEeecCC
Q psy13945 74 LKCNIQGP 81 (86)
Q Consensus 74 ~~~~~~~~ 81 (86)
....+.+|
T Consensus 285 ~~~~~~~~ 292 (383)
T 3ei3_B 285 KPDQIIIH 292 (383)
T ss_dssp SCSEEEEC
T ss_pred cccccccc
Confidence 65555544
No 96
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.4e-16 Score=88.39 Aligned_cols=85 Identities=9% Similarity=0.050 Sum_probs=71.3
Q ss_pred CeeEE--EECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCcc--ceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 1 LIRCI--AVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEG--EILQLV-TADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 1 ~i~~~--~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
+|.++ .|++++ +++++++.|+++++||+.+++....+.+|.. .+.+++ +|++..+++++.|+.+++||++++.+
T Consensus 310 ~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 310 YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC
T ss_pred cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc
Confidence 46777 578887 8999999999999999988776666655542 477888 99999999999999999999999888
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
+..+.+|.+.|
T Consensus 390 ~~~l~gH~~~V 400 (524)
T 2j04_B 390 VHPLVSRETTI 400 (524)
T ss_dssp CEEEEECSSCE
T ss_pred ceeeecCCCce
Confidence 88888887765
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.64 E-value=2e-14 Score=78.41 Aligned_cols=84 Identities=21% Similarity=0.347 Sum_probs=74.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCC-CCeEEEeec
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTN-DGSLKCNIQ 79 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 79 (86)
+|.+++|+|++.++++++.++.+++||..+++....+.+|...|.++.. ++..+++++.|+.+++||++ .+.....+.
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 214 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW-NRHVLSSGSRSGAIHHHDVRIANHQIGTLQ 214 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE-CCCEEEEEcCCCCEEEEecccCcceeeEEc
Confidence 4789999999999999999999999999999999999999999998873 45799999999999999998 466777888
Q ss_pred CCCCCC
Q psy13945 80 GPTEPV 85 (86)
Q Consensus 80 ~~~~~v 85 (86)
+|...|
T Consensus 215 ~~~~~v 220 (401)
T 4aez_A 215 GHSSEV 220 (401)
T ss_dssp CCSSCE
T ss_pred CCCCCe
Confidence 887654
No 98
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.64 E-value=2.1e-14 Score=79.00 Aligned_cols=81 Identities=25% Similarity=0.413 Sum_probs=71.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
|.++.+ +++.+++|+.++.|++||..+++....+.+|...|.++.. ++..+++++.|+.|++||+.+++++..+.+|
T Consensus 136 v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 212 (435)
T 1p22_A 136 VYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTLIHH 212 (435)
T ss_dssp EEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEECCC
T ss_pred EEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC
Confidence 445544 8999999999999999999999999999999999988853 7889999999999999999999999999888
Q ss_pred CCCC
Q psy13945 82 TEPV 85 (86)
Q Consensus 82 ~~~v 85 (86)
...|
T Consensus 213 ~~~v 216 (435)
T 1p22_A 213 CEAV 216 (435)
T ss_dssp CSCE
T ss_pred CCcE
Confidence 7765
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.5e-15 Score=82.98 Aligned_cols=85 Identities=16% Similarity=0.168 Sum_probs=73.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE----EEeCCccceEEEE-eCC---CCeEEEEeCCCCEEEEeCCCC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA----SWKGHEGEILQLV-TAD---DGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~v~~~~-~~~---~~~~~~~~~~~~i~~~~~~~~ 72 (86)
.|.+++|+|+++++++++.++.+++|++..++... .+.+|...|.++. +|+ +..+++++.|+.|++||++++
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC
Confidence 36899999999999999999999999988766443 6677889999999 999 889999999999999999998
Q ss_pred eEEEe-ecCCCCCC
Q psy13945 73 SLKCN-IQGPTEPV 85 (86)
Q Consensus 73 ~~~~~-~~~~~~~v 85 (86)
.++.. +.+|...|
T Consensus 231 ~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 231 FIVDKWLFGHKHFV 244 (450)
T ss_dssp TCEEEECCCCSSCE
T ss_pred ceeeeeecCCCCce
Confidence 88777 55787654
No 100
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.64 E-value=3.6e-14 Score=77.40 Aligned_cols=83 Identities=20% Similarity=0.378 Sum_probs=73.7
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEcc-CCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLR-TGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+|.+++| +++.+++++.++.+++||+. .......+.+|...|.++. +|++..+++++.|+.|++||++++.+...+
T Consensus 178 ~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 255 (401)
T 4aez_A 178 RVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK 255 (401)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE
T ss_pred ceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe
Confidence 3678888 56899999999999999998 4566778889999999999 999999999999999999999999999988
Q ss_pred cCCCCCC
Q psy13945 79 QGPTEPV 85 (86)
Q Consensus 79 ~~~~~~v 85 (86)
..|...|
T Consensus 256 ~~~~~~v 262 (401)
T 4aez_A 256 TNHNAAV 262 (401)
T ss_dssp CCCSSCC
T ss_pred cCCcceE
Confidence 8887765
No 101
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.3e-14 Score=77.84 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=71.4
Q ss_pred CeeEEEECCC--CCEEEEEeCCCeEEEEEccCCc--eEEEEeCCccceEEEE-eCC--CCeEEEEeCCCCEEEEeCCCC-
Q psy13945 1 LIRCIAVSSS--GSWIAIGQASGVLTLLDLRTGT--SLASWKGHEGEILQLV-TAD--DGTLISSSLDQTISAWHTNDG- 72 (86)
Q Consensus 1 ~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~-~~~--~~~~~~~~~~~~i~~~~~~~~- 72 (86)
+|.+++|+++ ++++++++.|+.+++||+.+++ ....+..|...+.++. +|+ +..+++++.|+.+++||++.+
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 4789999987 8999999999999999999886 5667778899999999 898 899999999999999999876
Q ss_pred -eEEEeecCCCCCC
Q psy13945 73 -SLKCNIQGPTEPV 85 (86)
Q Consensus 73 -~~~~~~~~~~~~v 85 (86)
.....+..|...|
T Consensus 137 ~~~~~~~~~~~~~v 150 (379)
T 3jrp_A 137 TTSPIIIDAHAIGV 150 (379)
T ss_dssp CCCEEEEECCTTCE
T ss_pred ceeeEEecCCCCce
Confidence 3344555665443
No 102
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.64 E-value=5.6e-15 Score=78.83 Aligned_cols=85 Identities=13% Similarity=0.182 Sum_probs=69.9
Q ss_pred CeeEEEECCCCCE-EEEEeC---CCeEEEEEccCCceEEEE-eCCccceEEEE-eCC---CCeEEEEeCCCCEEEEeCCC
Q psy13945 1 LIRCIAVSSSGSW-IAIGQA---SGVLTLLDLRTGTSLASW-KGHEGEILQLV-TAD---DGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 1 ~i~~~~~~~~~~~-~~~~~~---~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~~---~~~~~~~~~~~~i~~~~~~~ 71 (86)
+|.+++|+|++.. +++++. ++.+++||+.+++..... ..|...|.++. +|+ +..+++++.|+.+++||+.+
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 99 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA 99 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC
Confidence 4789999999865 556665 899999999987765443 36788999999 887 69999999999999999998
Q ss_pred Ce-EEEeecCCCCCC
Q psy13945 72 GS-LKCNIQGPTEPV 85 (86)
Q Consensus 72 ~~-~~~~~~~~~~~v 85 (86)
+. .+..+.+|...|
T Consensus 100 ~~~~~~~~~~~~~~v 114 (357)
T 3i2n_A 100 PEMPVYSVKGHKEII 114 (357)
T ss_dssp CSSCSEEECCCSSCE
T ss_pred CCccEEEEEecccce
Confidence 87 778888887755
No 103
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.64 E-value=5.1e-15 Score=78.77 Aligned_cols=84 Identities=17% Similarity=0.112 Sum_probs=67.8
Q ss_pred CeeEEEECC--CCCEEEEEeCCCeEEEEEccCCc--eEEEEeCCccceEEEE-eCC--CCeEEEEeCCCCEEEEeCCCCe
Q psy13945 1 LIRCIAVSS--SGSWIAIGQASGVLTLLDLRTGT--SLASWKGHEGEILQLV-TAD--DGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 1 ~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~-~~~--~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
+|.+++|++ +++++++++.|+++++||..+++ ....+.+|...|.++. +|+ +..+++++.|+.+++|+++.+.
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC
Confidence 478999986 48999999999999999998763 4566778999999999 887 7789999999999999998652
Q ss_pred ---EEEeecCCCCC
Q psy13945 74 ---LKCNIQGPTEP 84 (86)
Q Consensus 74 ---~~~~~~~~~~~ 84 (86)
....+.+|...
T Consensus 139 ~~~~~~~~~~h~~~ 152 (316)
T 3bg1_A 139 QWEVKKINNAHTIG 152 (316)
T ss_dssp CEEECCBTTSSSSC
T ss_pred CcceeeeeccccCC
Confidence 12344556543
No 104
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.63 E-value=3.5e-14 Score=75.87 Aligned_cols=79 Identities=19% Similarity=0.172 Sum_probs=72.2
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccC-CceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRT-GTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
.+.+++|+|+++.+++++.++.+++||+.+ .+....+..|...+.++. +|++..+++++.|+.+++||++++..+..+
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 367899999999999999999999999988 677788888999999999 999999999999999999999998888776
Q ss_pred c
Q psy13945 79 Q 79 (86)
Q Consensus 79 ~ 79 (86)
.
T Consensus 257 ~ 257 (369)
T 3zwl_B 257 E 257 (369)
T ss_dssp E
T ss_pred c
Confidence 5
No 105
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.63 E-value=3.4e-15 Score=82.23 Aligned_cols=82 Identities=12% Similarity=0.173 Sum_probs=69.1
Q ss_pred CeeEEEECCCCC-EEEEEeCCCeEEEEEccCCceEE---EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 1 LIRCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLA---SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 1 ~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+|.+++|+|++. ++++++.|+.+++||+...+... ...+|...|.++. +|++..+++++.|+.|++||++++.+.
T Consensus 252 ~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 252 KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred eEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence 478999999875 78899999999999998655432 3356888999999 999999999999999999999998877
Q ss_pred EeecCCC
Q psy13945 76 CNIQGPT 82 (86)
Q Consensus 76 ~~~~~~~ 82 (86)
..+..|.
T Consensus 332 ~~~~~~~ 338 (435)
T 4e54_B 332 LGLIPHP 338 (435)
T ss_dssp EEECCCC
T ss_pred eEEeccc
Confidence 7776654
No 106
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.63 E-value=5.7e-15 Score=80.93 Aligned_cols=81 Identities=12% Similarity=0.204 Sum_probs=69.9
Q ss_pred CeeEEEECCCC-CEEEEEeCCCeEEEEEccCCce----EEEEeCCcc------------ceEEEE-eCCCCeEEEEeCCC
Q psy13945 1 LIRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTS----LASWKGHEG------------EILQLV-TADDGTLISSSLDQ 62 (86)
Q Consensus 1 ~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~------------~v~~~~-~~~~~~~~~~~~~~ 62 (86)
+|.+++|+|++ .++++++.++.|++||+.+++. ...+..+.. .|.++. +|++..+++++. +
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~ 306 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L 306 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S
T ss_pred ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C
Confidence 37899999998 9999999999999999988776 677777765 899999 999999999999 9
Q ss_pred CEEEEeCCC-CeEEEeecCCC
Q psy13945 63 TISAWHTND-GSLKCNIQGPT 82 (86)
Q Consensus 63 ~i~~~~~~~-~~~~~~~~~~~ 82 (86)
.|++||++. ++++..+.+|.
T Consensus 307 ~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 307 SVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp EEEEEETTCCSSCSCCEESCG
T ss_pred eEEEEeCCCCccccceeeccc
Confidence 999999987 77777777774
No 107
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.63 E-value=2e-15 Score=83.55 Aligned_cols=83 Identities=14% Similarity=0.213 Sum_probs=68.1
Q ss_pred eeEEEECCCCCEEE----EEeCCCeEEEEEccCC--------ce---EEEEeCCccceEEEE-eCC-CCeEEEEeCCCCE
Q psy13945 2 IRCIAVSSSGSWIA----IGQASGVLTLLDLRTG--------TS---LASWKGHEGEILQLV-TAD-DGTLISSSLDQTI 64 (86)
Q Consensus 2 i~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~--------~~---~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i 64 (86)
|.+++|++++++++ +++.++.+++||+.+. +. ...+.+|...|.++. +|+ +..+++++.|+.+
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 78999999999998 7888999999998654 11 344556889999999 887 7889999999999
Q ss_pred EEEeCCCCeEEEeecCCCCC
Q psy13945 65 SAWHTNDGSLKCNIQGPTEP 84 (86)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~ 84 (86)
++||++++.......+|...
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp EEEEESSSEEEEEEECGGGC
T ss_pred EEEEcCCCcceeeccCCCCc
Confidence 99999988766655555443
No 108
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.62 E-value=7.7e-14 Score=74.09 Aligned_cols=80 Identities=18% Similarity=0.301 Sum_probs=72.1
Q ss_pred eeEEEECCCC--CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSG--SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+..++|++++ .++++++.++.+++||..+++....+.+|...|.++. +|++..+++++.|+.+++||+++.+++..+
T Consensus 174 v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 174 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 5678888764 5788999999999999999999999999999999999 999999999999999999999999988887
Q ss_pred cCC
Q psy13945 79 QGP 81 (86)
Q Consensus 79 ~~~ 81 (86)
..+
T Consensus 254 ~~~ 256 (340)
T 4aow_A 254 DGG 256 (340)
T ss_dssp ECS
T ss_pred cCC
Confidence 654
No 109
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.62 E-value=2.4e-14 Score=84.91 Aligned_cols=73 Identities=14% Similarity=0.200 Sum_probs=66.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+|.+++|+| ++++++++.|+++++||+.+++.+..+. +...|.++. +|++..+++++.|+.|++||++++.+.
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp CEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE
T ss_pred CEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 478999999 8899999999999999999988887776 567899999 999999999999999999999987754
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.62 E-value=2.1e-14 Score=79.08 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=72.2
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCC---ceEEEEeCCccceEEEE-eCCCC-eEEEEeCCCCEEEEeCCC-Ce
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTG---TSLASWKGHEGEILQLV-TADDG-TLISSSLDQTISAWHTND-GS 73 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~-~~ 73 (86)
.|.+++|+| ++..+++++.++.|++||+..+ +....+..|...+.++. +|++. .+++++.|+.|++||++. +.
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~ 312 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 312 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC
Confidence 378999999 6789999999999999999876 45667778999999999 89876 688999999999999987 56
Q ss_pred EEEeecCCCCCC
Q psy13945 74 LKCNIQGPTEPV 85 (86)
Q Consensus 74 ~~~~~~~~~~~v 85 (86)
++..+.+|...|
T Consensus 313 ~~~~~~~h~~~v 324 (430)
T 2xyi_A 313 KLHSFESHKDEI 324 (430)
T ss_dssp CSEEEECCSSCE
T ss_pred CeEEeecCCCCE
Confidence 677777776654
No 111
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.62 E-value=4e-15 Score=80.86 Aligned_cols=73 Identities=22% Similarity=0.267 Sum_probs=65.9
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccC----CceEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCCCCe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRT----GTSLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
+|.+++|+|+++++++++.++.+++||+.. .+....+.+|...|.++. +|+ +..+++++.|+.|++||++++.
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 478999999999999999999999999987 346777888999999999 888 8999999999999999998775
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.62 E-value=2.9e-14 Score=77.13 Aligned_cols=79 Identities=24% Similarity=0.402 Sum_probs=67.9
Q ss_pred CeeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEe-------------CCccceEEEE-eC-CCCeEEEEeCCCCE
Q psy13945 1 LIRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWK-------------GHEGEILQLV-TA-DDGTLISSSLDQTI 64 (86)
Q Consensus 1 ~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------------~~~~~v~~~~-~~-~~~~~~~~~~~~~i 64 (86)
+|.+++|+| +++++++++.++.+++||+.++.....+. +|...|.++. +| ++..+++++.|+.+
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i 124 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTL 124 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEE
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeE
Confidence 488999999 99999999999999999998765543332 4888999999 88 77899999999999
Q ss_pred EEEeCCCCeEEEeec
Q psy13945 65 SAWHTNDGSLKCNIQ 79 (86)
Q Consensus 65 ~~~~~~~~~~~~~~~ 79 (86)
++||+.+++....+.
T Consensus 125 ~iwd~~~~~~~~~~~ 139 (408)
T 4a11_B 125 KVWDTNTLQTADVFN 139 (408)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEeeCCCCccceecc
Confidence 999999988777665
No 113
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.7e-15 Score=85.53 Aligned_cols=80 Identities=15% Similarity=0.146 Sum_probs=65.1
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCc-eEEEEeCCccceEEE--E-eCCC-CeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGT-SLASWKGHEGEILQL--V-TADD-GTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~v~~~--~-~~~~-~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+|.+++|+++ ..|++|+.|++|++||+.++. ....+.+|...|.++ . ++++ ..+++++.|+++++||++++++.
T Consensus 268 ~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~ 346 (524)
T 2j04_B 268 LITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATT 346 (524)
T ss_dssp CEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHH
T ss_pred CEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcc
Confidence 4789999986 479999999999999998764 345678899999999 4 5666 78999999999999999876655
Q ss_pred EeecCC
Q psy13945 76 CNIQGP 81 (86)
Q Consensus 76 ~~~~~~ 81 (86)
..+.+|
T Consensus 347 ~~~~~~ 352 (524)
T 2j04_B 347 KTTVSR 352 (524)
T ss_dssp CEEEEE
T ss_pred cccccc
Confidence 444443
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.61 E-value=2.2e-14 Score=78.96 Aligned_cols=85 Identities=26% Similarity=0.443 Sum_probs=71.6
Q ss_pred CeeEEEECCCCC-EEEEEeCCCeEEEEEccC-CceEEEEeCCccceEEEE-eCCCC-eEEEEeCCCCEEEEeCCC-----
Q psy13945 1 LIRCIAVSSSGS-WIAIGQASGVLTLLDLRT-GTSLASWKGHEGEILQLV-TADDG-TLISSSLDQTISAWHTND----- 71 (86)
Q Consensus 1 ~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~----- 71 (86)
+|.+++|+|++. ++++++.++.|++||+.. ...+..+..|...|.++. +|++. .+++++.|+.|++||++.
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 478999999887 788999999999999987 556778888999999999 89875 688999999999999976
Q ss_pred ---------CeEEEeecCCCCCC
Q psy13945 72 ---------GSLKCNIQGPTEPV 85 (86)
Q Consensus 72 ---------~~~~~~~~~~~~~v 85 (86)
...+..+.+|...|
T Consensus 359 ~~~~~~~~~~~~~~~~~~h~~~v 381 (430)
T 2xyi_A 359 STEDAEDGPPELLFIHGGHTAKI 381 (430)
T ss_dssp CHHHHHHCCTTEEEECCCCSSCE
T ss_pred CccccccCCcceEEEcCCCCCCc
Confidence 35667777776654
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.61 E-value=2.2e-14 Score=76.61 Aligned_cols=81 Identities=16% Similarity=0.270 Sum_probs=69.4
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-e--CCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-T--ADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
+|.+++|+|+++++++++.++.+++||+.+++... +..|...|.++. . +++..+++++.|+.+++||+++++++..
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE
Confidence 47899999999999999999999999998887655 456888899887 3 5677899999999999999998887777
Q ss_pred ecCCC
Q psy13945 78 IQGPT 82 (86)
Q Consensus 78 ~~~~~ 82 (86)
+..+.
T Consensus 167 ~~~~~ 171 (368)
T 3mmy_A 167 LQLPE 171 (368)
T ss_dssp EECSS
T ss_pred EecCC
Confidence 76553
No 116
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.61 E-value=8e-15 Score=78.22 Aligned_cols=85 Identities=16% Similarity=0.275 Sum_probs=70.4
Q ss_pred CeeEEEECC---CCCEEEEEeCCCeEEEEEccCCceEEEE-----eCCccceEEEE-eCCCC-eEEEEeCCCCEEEEeCC
Q psy13945 1 LIRCIAVSS---SGSWIAIGQASGVLTLLDLRTGTSLASW-----KGHEGEILQLV-TADDG-TLISSSLDQTISAWHTN 70 (86)
Q Consensus 1 ~i~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~ 70 (86)
+|.+++|+| ++..+++++.++.+++||+..++....+ .+|...|.++. +|++. .+++++.|+.+++||++
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 478999999 8999999999999999998866544333 48899999999 99988 78999999999999987
Q ss_pred CC-------------------eEEEeecCCCCCC
Q psy13945 71 DG-------------------SLKCNIQGPTEPV 85 (86)
Q Consensus 71 ~~-------------------~~~~~~~~~~~~v 85 (86)
.+ ..+..+.+|...|
T Consensus 291 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v 324 (357)
T 3i2n_A 291 YPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI 324 (357)
T ss_dssp CCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE
T ss_pred CCcccccccCCCCccccccccceeeccccCCCCe
Confidence 53 4566777776654
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.60 E-value=7.6e-14 Score=76.81 Aligned_cols=82 Identities=21% Similarity=0.315 Sum_probs=72.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+|.+++| +++.+++++.++.+++||+.+++....+.+|...+.++.. ++..+++++.|+.|++||+++++++..+.+
T Consensus 258 ~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 334 (435)
T 1p22_A 258 AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEG 334 (435)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred cEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCCCCEEEEEeC
Confidence 3567777 7899999999999999999999999999999999988862 467999999999999999999999999999
Q ss_pred CCCCC
Q psy13945 81 PTEPV 85 (86)
Q Consensus 81 ~~~~v 85 (86)
|...|
T Consensus 335 h~~~v 339 (435)
T 1p22_A 335 HEELV 339 (435)
T ss_dssp CSSCE
T ss_pred CcCcE
Confidence 88765
No 118
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.60 E-value=6.2e-14 Score=75.84 Aligned_cols=78 Identities=19% Similarity=0.169 Sum_probs=62.5
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEEccCC-----------------------------------------------ce
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLLDLRTG-----------------------------------------------TS 33 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------------------------------------~~ 33 (86)
+|.+++|+|+++++++++.++.+++||+.++ +.
T Consensus 247 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~ 326 (408)
T 4a11_B 247 KVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ 326 (408)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE
T ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc
Confidence 4789999999999999999999999998653 23
Q ss_pred EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 34 LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 34 ~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
...+.+|...|.++. +|++..+++++.|+.|++|++++++.+...
T Consensus 327 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 327 ITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred eeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 455667888999999 999999999999999999999988766543
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.60 E-value=4.4e-14 Score=77.83 Aligned_cols=77 Identities=27% Similarity=0.455 Sum_probs=69.5
Q ss_pred ECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCCCCCC
Q psy13945 7 VSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQGPTEPV 85 (86)
Q Consensus 7 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 85 (86)
++++++++++++.|+.+++||..+++....+.+|...|.++. . +..+++++.|+.|++||+.+++++..+.+|...|
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v 202 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV 202 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcE
Confidence 445789999999999999999999999999999999999988 6 5689999999999999999999999999888765
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.58 E-value=3.2e-15 Score=81.59 Aligned_cols=78 Identities=14% Similarity=0.130 Sum_probs=63.9
Q ss_pred CCCCCEEEEEeCCCeEEEEEccCCceE-----EEEeCCccceEEEE-eC--------CCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 8 SSSGSWIAIGQASGVLTLLDLRTGTSL-----ASWKGHEGEILQLV-TA--------DDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 8 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-----~~~~~~~~~v~~~~-~~--------~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
.+++.++++++.|+++++||...++.. ..+.+|...|.+++ +| ++..+++++.|+++++||++++.
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc
Confidence 445668999999999999999877543 23568999999999 76 67899999999999999998888
Q ss_pred EEEeecCCCCCC
Q psy13945 74 LKCNIQGPTEPV 85 (86)
Q Consensus 74 ~~~~~~~~~~~v 85 (86)
++..+..|.+.|
T Consensus 178 ~~~~~~~~~~~v 189 (393)
T 4gq1_A 178 PILAGYPLSSPG 189 (393)
T ss_dssp EEEEEEECSSCE
T ss_pred eeeeecCCCCCc
Confidence 777776666544
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.58 E-value=6.2e-14 Score=81.75 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=71.3
Q ss_pred CeeEEEECCC--CCEEEEEeCCCeEEEEEccCCc--eEEEEeCCccceEEEE-eCC--CCeEEEEeCCCCEEEEeCCCC-
Q psy13945 1 LIRCIAVSSS--GSWIAIGQASGVLTLLDLRTGT--SLASWKGHEGEILQLV-TAD--DGTLISSSLDQTISAWHTNDG- 72 (86)
Q Consensus 1 ~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~-~~~--~~~~~~~~~~~~i~~~~~~~~- 72 (86)
+|.+++|+++ ++++++++.|+.|++||+.++. ....+.+|...|.++. +|+ +..+++++.|+.|++||++.+
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 4789999988 9999999999999999998876 5667778999999999 898 999999999999999999876
Q ss_pred -eEEEeecCCCCCC
Q psy13945 73 -SLKCNIQGPTEPV 85 (86)
Q Consensus 73 -~~~~~~~~~~~~v 85 (86)
.....+.+|...|
T Consensus 135 ~~~~~~~~~~~~~v 148 (753)
T 3jro_A 135 TTSPIIIDAHAIGV 148 (753)
T ss_dssp CCCCEEEECCSSCE
T ss_pred CcceeEeecCCCce
Confidence 2334445565443
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.58 E-value=6e-14 Score=75.76 Aligned_cols=69 Identities=22% Similarity=0.271 Sum_probs=59.7
Q ss_pred EeCCCeEEEEEccCCc----------------eEEEEeCCccceEEEE-eCCCCeEEEEeCCCC-EEEEeCCCCeEEEee
Q psy13945 17 GQASGVLTLLDLRTGT----------------SLASWKGHEGEILQLV-TADDGTLISSSLDQT-ISAWHTNDGSLKCNI 78 (86)
Q Consensus 17 ~~~~~~v~~~~~~~~~----------------~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~ 78 (86)
|+.++.+++||+.++. ....+.+|...|.++. +|++..+++++.|++ +++||+++++++..+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 6889999999998754 1567889999999999 999999999999998 999999999999999
Q ss_pred c-C-CCCCC
Q psy13945 79 Q-G-PTEPV 85 (86)
Q Consensus 79 ~-~-~~~~v 85 (86)
. + |...|
T Consensus 235 ~~g~h~~~v 243 (355)
T 3vu4_A 235 RRGLDRADV 243 (355)
T ss_dssp ECTTCCSCE
T ss_pred EcCCCCCcE
Confidence 7 5 77655
No 123
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.54 E-value=6.6e-13 Score=73.19 Aligned_cols=80 Identities=25% Similarity=0.459 Sum_probs=54.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
|.++.+ ++..+++++.++.+++||..+++....+.+|...+.++.. ++..+++++.|+.+++||+++++++..+.+|
T Consensus 242 v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 318 (445)
T 2ovr_B 242 VRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 318 (445)
T ss_dssp EEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCC
Confidence 455665 5666777777777777777777666666666666666643 5666777777777777777777777777666
Q ss_pred CCC
Q psy13945 82 TEP 84 (86)
Q Consensus 82 ~~~ 84 (86)
...
T Consensus 319 ~~~ 321 (445)
T 2ovr_B 319 QSL 321 (445)
T ss_dssp CSC
T ss_pred ccc
Confidence 543
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.54 E-value=1.6e-13 Score=74.27 Aligned_cols=81 Identities=15% Similarity=0.166 Sum_probs=60.1
Q ss_pred eeEEEECCC----CCEEEEEeC--------------------CCeEEEEEcc-CCceEEEEeCCccceEEEE-eC---CC
Q psy13945 2 IRCIAVSSS----GSWIAIGQA--------------------SGVLTLLDLR-TGTSLASWKGHEGEILQLV-TA---DD 52 (86)
Q Consensus 2 i~~~~~~~~----~~~~~~~~~--------------------~~~v~~~~~~-~~~~~~~~~~~~~~v~~~~-~~---~~ 52 (86)
|..++++|| ++.+++++. ++.|++|++. +++....+..|...+..+. ++ ++
T Consensus 114 v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~ 193 (356)
T 2w18_A 114 IRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQ 193 (356)
T ss_dssp EEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETST
T ss_pred eEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCC
Confidence 567777787 666666543 7778888874 4666666677776666666 55 67
Q ss_pred CeEEEEeCCCCEEEEeCCCCeEEEeecCCC
Q psy13945 53 GTLISSSLDQTISAWHTNDGSLKCNIQGPT 82 (86)
Q Consensus 53 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 82 (86)
..+++++.|++|++||+.++++++++.+|.
T Consensus 194 ~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 194 EALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred ceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 889999999999999999999999998654
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.43 E-value=1e-11 Score=68.00 Aligned_cols=80 Identities=11% Similarity=0.016 Sum_probs=69.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
|.+++|+++++++++++.++.+++||..+++....+..+...+.++. +|++..++ ++..++.|.+||+++++.+..+.
T Consensus 172 v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 251 (433)
T 3bws_A 172 VETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD 251 (433)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC
T ss_pred eeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec
Confidence 67899999999999999999999999999888888888888899999 99988775 55588999999999998887765
Q ss_pred CC
Q psy13945 80 GP 81 (86)
Q Consensus 80 ~~ 81 (86)
.+
T Consensus 252 ~~ 253 (433)
T 3bws_A 252 KI 253 (433)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.41 E-value=2.8e-11 Score=65.56 Aligned_cols=79 Identities=13% Similarity=0.169 Sum_probs=65.8
Q ss_pred eeEEEECCCCCEE-EEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWI-AIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+.+++|+|+++.+ ++++.++.+++||..+++....+..+. .+.++. +|++..++ ++..++.|.+||+.+++.+..+
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~ 112 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV 112 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE
Confidence 5789999999876 677789999999999998887777554 888999 99988774 5567799999999999888777
Q ss_pred cCC
Q psy13945 79 QGP 81 (86)
Q Consensus 79 ~~~ 81 (86)
..+
T Consensus 113 ~~~ 115 (391)
T 1l0q_A 113 KTG 115 (391)
T ss_dssp ECS
T ss_pred eCC
Confidence 654
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.40 E-value=1.1e-12 Score=71.79 Aligned_cols=83 Identities=8% Similarity=0.116 Sum_probs=69.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE-----EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA-----SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+.+++|+|++.++++++.++.+++||..+++... .+.+|...+.++. ++++..+++++.++.+++||+++++.+
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~ 204 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK 204 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE
Confidence 3468899988888888889999999999888765 3346777899999 889999999999999999999998888
Q ss_pred EeecCCCCC
Q psy13945 76 CNIQGPTEP 84 (86)
Q Consensus 76 ~~~~~~~~~ 84 (86)
..+..|...
T Consensus 205 ~~~~~~~~~ 213 (433)
T 3bws_A 205 ATVDLTGKW 213 (433)
T ss_dssp EEEECSSSS
T ss_pred EEEcCCCCC
Confidence 887766543
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.38 E-value=7.7e-11 Score=63.85 Aligned_cols=80 Identities=16% Similarity=0.172 Sum_probs=66.8
Q ss_pred eeEEEECCCCCEEEEEe---CCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeE-EEEeCCCCEEEEeCCCCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQ---ASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTL-ISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~~ 76 (86)
+.+++|+|+++.+++++ .++.+.+||..+++....+..+. .+.++. +|++..+ ++++.++.+++||+.+++.+.
T Consensus 202 ~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 202 PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 56889999999888877 68999999999888877777654 467788 8998876 677889999999999999888
Q ss_pred eecCCC
Q psy13945 77 NIQGPT 82 (86)
Q Consensus 77 ~~~~~~ 82 (86)
.+..|.
T Consensus 281 ~~~~~~ 286 (391)
T 1l0q_A 281 TMAVGK 286 (391)
T ss_dssp EEECSS
T ss_pred EEECCc
Confidence 876554
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.34 E-value=1.9e-10 Score=63.44 Aligned_cols=80 Identities=15% Similarity=0.093 Sum_probs=62.7
Q ss_pred CeeEEEECCCCCEEEEEeCCC---eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEE-EEeCCC--CEEEEeCCCCe
Q psy13945 1 LIRCIAVSSSGSWIAIGQASG---VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLI-SSSLDQ--TISAWHTNDGS 73 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~-~~~~~~--~i~~~~~~~~~ 73 (86)
.+.+++|+|||+.++.++.++ .|++||+.+++.. .+..+...+.++. +|++..++ +++.++ .|.+||+.+++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 367899999999999888775 9999999988764 4566777889999 99999777 666555 49999998876
Q ss_pred EEEeecCCC
Q psy13945 74 LKCNIQGPT 82 (86)
Q Consensus 74 ~~~~~~~~~ 82 (86)
. ..+..|.
T Consensus 259 ~-~~l~~~~ 266 (415)
T 2hqs_A 259 I-RQVTDGR 266 (415)
T ss_dssp E-EECCCCS
T ss_pred E-EeCcCCC
Confidence 5 3444454
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.27 E-value=5e-10 Score=63.79 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=66.0
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEc--cCCceEEEEeCCccceEEEE-eC----CCCeEEEEe-CCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDL--RTGTSLASWKGHEGEILQLV-TA----DDGTLISSS-LDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~v~~~~-~~----~~~~~~~~~-~~~~i~~~~~~~~~ 73 (86)
+..++|+|||+++++++.++.|.+||+ .+++.+..+.. ......+. +| ++..+++++ .++++.+||..+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 467899999999999999999999999 78888777764 44567888 89 999888777 58999999999998
Q ss_pred EEEeecC
Q psy13945 74 LKCNIQG 80 (86)
Q Consensus 74 ~~~~~~~ 80 (86)
++..+..
T Consensus 260 ~~~~i~~ 266 (543)
T 1nir_A 260 PKQIVST 266 (543)
T ss_dssp EEEEEEC
T ss_pred cceeecc
Confidence 8887753
No 131
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.25 E-value=2.3e-10 Score=68.93 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=66.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC----------CCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLD----------QTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~----------~~i~~~~~~ 70 (86)
+..++|+|||+.++.++.++.+++||+.+++.......+...+..+. +|++..++.++.+ ..+.+||+.
T Consensus 381 ~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 381 VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 57899999999999999999999999999888777767888888899 9999998877654 489999998
Q ss_pred CCeEEEeecCCC
Q psy13945 71 DGSLKCNIQGPT 82 (86)
Q Consensus 71 ~~~~~~~~~~~~ 82 (86)
+++ ...+..|.
T Consensus 461 ~g~-~~~l~~~~ 471 (1045)
T 1k32_A 461 GRK-IFAATTEN 471 (1045)
T ss_dssp TTE-EEECSCSS
T ss_pred CCc-EEEeeCCC
Confidence 877 45554443
No 132
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.16 E-value=2.3e-09 Score=56.84 Aligned_cols=76 Identities=14% Similarity=0.067 Sum_probs=62.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+.+++|+||++.++++ ++.+.+||..+++....+... ..+.++. +|++..++.++.++.|.+||+.+++.+..+..
T Consensus 243 ~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp EEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred eeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 3568999999998887 689999999988877666543 4567788 89999888888899999999999988877754
No 133
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.13 E-value=5e-10 Score=63.73 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=63.5
Q ss_pred eEEEECCCCCEEEEEeCC----CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCC--CEEEEeCCCCeEE
Q psy13945 3 RCIAVSSSGSWIAIGQAS----GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQ--TISAWHTNDGSLK 75 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~--~i~~~~~~~~~~~ 75 (86)
.+++|+|||+.++.++.+ ..|++||+.+++.. .+..+...+..+. +|++..+++...++ .|.+||+.+++..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 367899999999977766 78999998877754 5566777888899 99999999777777 8999999988777
Q ss_pred EeecCCC
Q psy13945 76 CNIQGPT 82 (86)
Q Consensus 76 ~~~~~~~ 82 (86)
.+.+|.
T Consensus 232 -~~~~~~ 237 (582)
T 3o4h_A 232 -DLELPS 237 (582)
T ss_dssp -ECCCSC
T ss_pred -EccCCC
Confidence 666554
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.12 E-value=6.3e-10 Score=64.65 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=57.4
Q ss_pred eeEEEECCCCCEEEEEeC-CC-----eEEEEEccCCceEEEEeCCcc------------------------ceEEEE-eC
Q psy13945 2 IRCIAVSSSGSWIAIGQA-SG-----VLTLLDLRTGTSLASWKGHEG------------------------EILQLV-TA 50 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~-~~-----~v~~~~~~~~~~~~~~~~~~~------------------------~v~~~~-~~ 50 (86)
+..++|+|||+.+++++. ++ .+++||+.+++....+..+.. .+..+. +|
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence 678999999999998887 77 899999998887665544322 267788 99
Q ss_pred CCCeEEEEeCCCCEEEEeCCCC
Q psy13945 51 DDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 51 ~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
++..++.++. +.|.+||+.++
T Consensus 119 Dg~~l~~~~~-~~i~~~d~~~~ 139 (741)
T 2ecf_A 119 DAQRLLFPLG-GELYLYDLKQE 139 (741)
T ss_dssp TSSEEEEEET-TEEEEEESSSC
T ss_pred CCCEEEEEeC-CcEEEEECCCC
Confidence 9999988776 89999999877
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.09 E-value=2.8e-09 Score=60.78 Aligned_cols=74 Identities=11% Similarity=0.055 Sum_probs=63.4
Q ss_pred EECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC--CCCeEEEeecC
Q psy13945 6 AVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHT--NDGSLKCNIQG 80 (86)
Q Consensus 6 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 80 (86)
.++|++.+++++..+++|.+||..+++++..+..... +..+. +|++..+++++.++.|.+||+ .+++++..+..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~ 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec
Confidence 3678888999999999999999999999888874333 78888 999999999999999999999 78888777653
No 136
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.09 E-value=1.2e-08 Score=54.39 Aligned_cols=77 Identities=12% Similarity=-0.028 Sum_probs=62.4
Q ss_pred eeEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+..++++| |++.++.+ ++.+.+||+.+++....+... ..+..+. ++++..++.++.++.+.+||..+++.+..+.
T Consensus 257 ~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 257 YFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp EEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred ceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeee
Confidence 35778899 99998888 789999999988877766533 3456788 8998888778888999999999998888775
Q ss_pred CC
Q psy13945 80 GP 81 (86)
Q Consensus 80 ~~ 81 (86)
..
T Consensus 334 ~~ 335 (349)
T 1jmx_B 334 LP 335 (349)
T ss_dssp CS
T ss_pred cC
Confidence 43
No 137
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.04 E-value=4.2e-09 Score=58.16 Aligned_cols=81 Identities=19% Similarity=0.163 Sum_probs=61.0
Q ss_pred eeEEEECCCCCEEEEEeCC---CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCC---CEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQAS---GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQ---TISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~---~i~~~~~~~~~~ 74 (86)
+.+++|+|||++++.++.+ ..+.+||..+++.. .+..+. .+.++. +|++..++.++.++ .|.+||+. +..
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~ 389 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRF 389 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCC
T ss_pred ccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCc
Confidence 5678999999998877654 68999999887763 344443 778888 99999988877666 79999986 555
Q ss_pred EEeecCCCCCC
Q psy13945 75 KCNIQGPTEPV 85 (86)
Q Consensus 75 ~~~~~~~~~~v 85 (86)
...+..|...|
T Consensus 390 ~~~l~~~~~~v 400 (415)
T 2hqs_A 390 KARLPATDGQV 400 (415)
T ss_dssp EEECCCSSSEE
T ss_pred EEEeeCCCCCC
Confidence 66666665543
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.04 E-value=5.8e-09 Score=54.15 Aligned_cols=82 Identities=15% Similarity=0.222 Sum_probs=60.0
Q ss_pred eeEEEECCCCCEEEEEe-CCCeEEEEEcc-CCceEEEEeCCccceEEEE-eCCCCeEEEEeCC-----------CCEEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQ-ASGVLTLLDLR-TGTSLASWKGHEGEILQLV-TADDGTLISSSLD-----------QTISAW 67 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~-~~~~v~~~~~~-~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~-----------~~i~~~ 67 (86)
+.+++|+|+++.++.++ .++.+.+|++. .+.....+..+...+..+. +|++..++.++.+ ..+.+|
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 67899999999777655 58889999876 4555566666777788888 8999988777654 569999
Q ss_pred eCCCCeE--EEeecCCCC
Q psy13945 68 HTNDGSL--KCNIQGPTE 83 (86)
Q Consensus 68 ~~~~~~~--~~~~~~~~~ 83 (86)
|+.+++. +..+.+|..
T Consensus 255 d~~~~~~~~~~~~~~~~~ 272 (297)
T 2ojh_A 255 DMDGGNVETLFDLFGGQG 272 (297)
T ss_dssp ETTSCSCEEEEEEEESTT
T ss_pred ecCCCCceeeeccCCCCc
Confidence 9987754 333334443
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.01 E-value=1.8e-08 Score=53.81 Aligned_cols=78 Identities=12% Similarity=0.090 Sum_probs=63.9
Q ss_pred eeEEEECCCCCEEEEEe--CCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQ--ASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+.+++|+|+++.++.++ .++.+.+||..+++....+......+..+. +|++..++.+..++.+.+||..+++....+
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 46789999998777665 478899999998888777764555567778 999999988888999999999999887766
Q ss_pred c
Q psy13945 79 Q 79 (86)
Q Consensus 79 ~ 79 (86)
.
T Consensus 223 ~ 223 (353)
T 3vgz_A 223 K 223 (353)
T ss_dssp E
T ss_pred E
Confidence 4
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.00 E-value=2.6e-08 Score=52.96 Aligned_cols=77 Identities=10% Similarity=0.117 Sum_probs=58.6
Q ss_pred EEEECCCCCEEEEEeC-CCeEEEEEccCCce-EEEEeCCccceEEEE-eCCCCeEEEEeCC-C--CEEEEeCCCCeEEEe
Q psy13945 4 CIAVSSSGSWIAIGQA-SGVLTLLDLRTGTS-LASWKGHEGEILQLV-TADDGTLISSSLD-Q--TISAWHTNDGSLKCN 77 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~-~~~~~~~~~~v~~~~-~~~~~~~~~~~~~-~--~i~~~~~~~~~~~~~ 77 (86)
.++|+|+++.++.++. ++.+.+||..+++. ...+..+.....++. +|++..+++...+ + .|.+||+.+++.+..
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE
Confidence 7899999986555544 88999999988887 556555555555477 8999988855544 3 899999999888777
Q ss_pred ecC
Q psy13945 78 IQG 80 (86)
Q Consensus 78 ~~~ 80 (86)
+..
T Consensus 124 ~~~ 126 (331)
T 3u4y_A 124 IPI 126 (331)
T ss_dssp EEC
T ss_pred EEC
Confidence 654
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.99 E-value=7.8e-09 Score=60.17 Aligned_cols=78 Identities=14% Similarity=0.051 Sum_probs=61.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCc--eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGT--SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
+.+++|+|||+.++.++. +.+++||+.++. ....+..+...+..+. +|++..++.++. ..|.+||+.+++.....
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLT 188 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECC
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEec
Confidence 467899999999988876 899999998772 3344556667788999 999999887764 58999999988777655
Q ss_pred cCC
Q psy13945 79 QGP 81 (86)
Q Consensus 79 ~~~ 81 (86)
..+
T Consensus 189 ~~~ 191 (741)
T 2ecf_A 189 ADG 191 (741)
T ss_dssp CCC
T ss_pred cCC
Confidence 433
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.97 E-value=3.9e-08 Score=52.53 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=61.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeC----CccceEEEE-eCCCCeEEEE-eCCCCEEEEeCCCCeEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKG----HEGEILQLV-TADDGTLISS-SLDQTISAWHTNDGSLK 75 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~v~~~~-~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 75 (86)
+.+++|+|+++.++.++.++.+.+||..+++....+.. +...+..+. +|++..++.+ ..++.+.+||..+++.+
T Consensus 187 ~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 187 STGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNIL 266 (353)
T ss_dssp CCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 45678999999999999999999999998888766653 344567788 8998866554 45689999999988877
Q ss_pred Eeec
Q psy13945 76 CNIQ 79 (86)
Q Consensus 76 ~~~~ 79 (86)
..+.
T Consensus 267 ~~~~ 270 (353)
T 3vgz_A 267 AKVA 270 (353)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 143
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.96 E-value=6.9e-08 Score=52.56 Aligned_cols=72 Identities=10% Similarity=0.208 Sum_probs=59.8
Q ss_pred EEECCCCCEEEEEeC-----------CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 5 IAVSSSGSWIAIGQA-----------SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+++++|+..++.... ...+.+||..+++.+..+..+. ...+. +|++..+++++. +.|.+||..++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 678999877665532 3489999999999988888765 78889 999998888777 99999999999
Q ss_pred --eEEEeec
Q psy13945 73 --SLKCNIQ 79 (86)
Q Consensus 73 --~~~~~~~ 79 (86)
+.+..+.
T Consensus 336 ~l~~~~~i~ 344 (361)
T 2oiz_A 336 EPKLLRTIE 344 (361)
T ss_dssp SCEEEEEET
T ss_pred cceeeEEec
Confidence 8888864
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.94 E-value=4.9e-08 Score=51.73 Aligned_cols=75 Identities=19% Similarity=0.189 Sum_probs=59.2
Q ss_pred eEEEECCCCCEEEEEe------------CCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 3 RCIAVSSSGSWIAIGQ------------ASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
..++|+|+++.++.+. .++.+.+||..+++....+.. ...+..+. +|++..++.+ ++.+.+||+
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~ 161 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDP 161 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEET
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEEC
Confidence 4688999998888775 568999999988887766654 34466777 8999877766 688999999
Q ss_pred CCCeEEEeecC
Q psy13945 70 NDGSLKCNIQG 80 (86)
Q Consensus 70 ~~~~~~~~~~~ 80 (86)
.+++....+..
T Consensus 162 ~~~~~~~~~~~ 172 (337)
T 1pby_B 162 EAGTLVEDKPI 172 (337)
T ss_dssp TTTEEEEEECS
T ss_pred CCCcEeeeeec
Confidence 99988776653
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.93 E-value=4.8e-09 Score=60.86 Aligned_cols=77 Identities=10% Similarity=-0.001 Sum_probs=59.3
Q ss_pred eeEEEECCCCCEEEEEeCC---------CeEEEEEccCCceEEEEe---CCccceEEEE-eCCCCeEEEEeCCCCEEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQAS---------GVLTLLDLRTGTSLASWK---GHEGEILQLV-TADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~---~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~ 68 (86)
+.+++|+|||+.++.+..+ +.+.+||+.+++. ..+. .+...+..+. +|++..++.++. +.|.+|+
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 6789999999999988764 7888999988775 2222 2334477788 999999988776 7899999
Q ss_pred CCCCeEEEeecC
Q psy13945 69 TNDGSLKCNIQG 80 (86)
Q Consensus 69 ~~~~~~~~~~~~ 80 (86)
..+++.......
T Consensus 141 ~~~g~~~~~~~~ 152 (723)
T 1xfd_A 141 HVGKQAIRVVST 152 (723)
T ss_dssp SSSSCCEEEECC
T ss_pred CCCCceEEEecC
Confidence 988877665544
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.92 E-value=3.1e-08 Score=52.62 Aligned_cols=78 Identities=10% Similarity=0.085 Sum_probs=55.1
Q ss_pred eeEEEECCCCCEEEEEeCC-CeEEEEEcc--CCce--EEEEeCCccceEEEE-eCCCCeEEEEe-CCCCEEEEeCC---C
Q psy13945 2 IRCIAVSSSGSWIAIGQAS-GVLTLLDLR--TGTS--LASWKGHEGEILQLV-TADDGTLISSS-LDQTISAWHTN---D 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~-~~v~~~~~~--~~~~--~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~~~i~~~~~~---~ 71 (86)
+.+++|+|+++.+++++.+ +.+.+|++. +++. ...+.... .+..+. +|++..++.++ .++.+.+|++. .
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 118 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP 118 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE
T ss_pred CceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc
Confidence 4578999999988877776 999999987 4443 33444333 677888 89998776554 57889999994 3
Q ss_pred CeEEEeecC
Q psy13945 72 GSLKCNIQG 80 (86)
Q Consensus 72 ~~~~~~~~~ 80 (86)
......+..
T Consensus 119 ~~~~~~~~~ 127 (343)
T 1ri6_A 119 VGVVDVVEG 127 (343)
T ss_dssp EEEEEEECC
T ss_pred ccccccccC
Confidence 344444443
No 147
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.92 E-value=5.4e-09 Score=56.61 Aligned_cols=76 Identities=20% Similarity=0.160 Sum_probs=58.7
Q ss_pred EEECCCCCEEEEEeC-CC--eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 5 IAVSSSGSWIAIGQA-SG--VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
.+|+|||+.++..+. ++ .|.+||..+++.......+...+.... +|++..++....+..+.+||+.+++....+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 679999998887776 56 488889888877665555555554566 89999999999889999999998876655443
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.91 E-value=1e-07 Score=51.07 Aligned_cols=74 Identities=11% Similarity=0.211 Sum_probs=53.1
Q ss_pred eeEEEECCCCCEE-EEEeCCCeEEEEEccC-C--ceEEEEeCCccceEEEE-eCCCCeEEEEeC-CCCEEEE--eCCCCe
Q psy13945 2 IRCIAVSSSGSWI-AIGQASGVLTLLDLRT-G--TSLASWKGHEGEILQLV-TADDGTLISSSL-DQTISAW--HTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~-~~~~~~~~v~~~~~~~-~--~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~-~~~i~~~--~~~~~~ 73 (86)
+..++|+|||+++ ++...++.+.+|++.. + +....+..+...+..+. +|++..++.+.. ++.+.+| |..+++
T Consensus 242 ~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 242 AAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp EEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred ceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 4578999999976 5556689999999862 2 33445555555677888 999998776665 5889999 555565
Q ss_pred EE
Q psy13945 74 LK 75 (86)
Q Consensus 74 ~~ 75 (86)
..
T Consensus 322 l~ 323 (347)
T 3hfq_A 322 LS 323 (347)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.90 E-value=3.5e-08 Score=59.71 Aligned_cols=81 Identities=11% Similarity=0.088 Sum_probs=65.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEE-EEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLT-LLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+..++|+ ||+.++.++.+..+. +|+...++... +..+...+..+. +|++..++.++.++.+.+||+.+++....+.
T Consensus 340 ~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~ 417 (1045)
T 1k32_A 340 YVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 417 (1045)
T ss_dssp EEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc
Confidence 4678899 998888888888888 89987766543 336677888999 9999999999999999999999988777776
Q ss_pred CCCCC
Q psy13945 80 GPTEP 84 (86)
Q Consensus 80 ~~~~~ 84 (86)
+|...
T Consensus 418 ~~~~~ 422 (1045)
T 1k32_A 418 SREAM 422 (1045)
T ss_dssp CSSSC
T ss_pred CCCCC
Confidence 66544
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.90 E-value=1.2e-09 Score=63.36 Aligned_cols=71 Identities=15% Similarity=0.069 Sum_probs=58.0
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCcc---ceEEEE-eCCCCeEEEEeCC---------CCEEEEeC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEG---EILQLV-TADDGTLISSSLD---------QTISAWHT 69 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~~-~~~~~~~~~~~~~---------~~i~~~~~ 69 (86)
..++|+|||+++++ +.++.+++||..+++....+..+.. .+.++. +|++..++.+..+ +.+.+||+
T Consensus 20 ~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~ 98 (723)
T 1xfd_A 20 PEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (723)
T ss_dssp CCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred cccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEEC
Confidence 46789999997766 6789999999998887777666554 488899 9999999888764 67889999
Q ss_pred CCCeE
Q psy13945 70 NDGSL 74 (86)
Q Consensus 70 ~~~~~ 74 (86)
.+++.
T Consensus 99 ~~~~~ 103 (723)
T 1xfd_A 99 PHGDP 103 (723)
T ss_dssp SSCCC
T ss_pred CCCce
Confidence 88765
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.84 E-value=1e-07 Score=49.47 Aligned_cols=80 Identities=16% Similarity=0.136 Sum_probs=57.2
Q ss_pred eeEEEECCCCCEEE-EEeCCCeEEEEEccC-CceEEEEeCCccceEEEE-eCCCCeEEEEe-CCCCEEEEeCC-CCeEEE
Q psy13945 2 IRCIAVSSSGSWIA-IGQASGVLTLLDLRT-GTSLASWKGHEGEILQLV-TADDGTLISSS-LDQTISAWHTN-DGSLKC 76 (86)
Q Consensus 2 i~~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~~~i~~~~~~-~~~~~~ 76 (86)
+..++|+||++.++ ++..++.+.+|++.. ......+..+...+.++. +|++..++..+ .++.+.+|++. .+....
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~ 210 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVE 210 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEE
T ss_pred ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcE
Confidence 46789999999776 777889889988642 233445556677888899 89999777555 58889999875 344444
Q ss_pred eecCC
Q psy13945 77 NIQGP 81 (86)
Q Consensus 77 ~~~~~ 81 (86)
.+..|
T Consensus 211 ~~~~~ 215 (297)
T 2ojh_A 211 RITDS 215 (297)
T ss_dssp ECCCC
T ss_pred EEecC
Confidence 45444
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.81 E-value=1e-07 Score=50.75 Aligned_cols=76 Identities=11% Similarity=0.040 Sum_probs=60.3
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCc-cceEEEE-eCCCCeE-EEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHE-GEILQLV-TADDGTL-ISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
++++++++.++++++.++.|.+||..+++....+.... .....+. +|++..+ ++...++.|.+||+.+++....+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 45678888999999999999999999888877766433 2456777 8998755 566678999999999988776654
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.81 E-value=9.6e-08 Score=55.48 Aligned_cols=71 Identities=18% Similarity=0.261 Sum_probs=55.9
Q ss_pred eeEEEECCCCCEEEEEe---------------------------------CCCeEEEEEccCCceEEEEe--CCccceEE
Q psy13945 2 IRCIAVSSSGSWIAIGQ---------------------------------ASGVLTLLDLRTGTSLASWK--GHEGEILQ 46 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~---------------------------------~~~~v~~~~~~~~~~~~~~~--~~~~~v~~ 46 (86)
+.++.|+|||+.|+.++ .+..+.+||+.+++...... .+...+..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 36789999999998876 44679999998877544332 34567888
Q ss_pred EE-eCCCCeEEEEeCCC-----CEEEEeCCCC
Q psy13945 47 LV-TADDGTLISSSLDQ-----TISAWHTNDG 72 (86)
Q Consensus 47 ~~-~~~~~~~~~~~~~~-----~i~~~~~~~~ 72 (86)
+. +|++..++.++.+. .+.+||..++
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 89 99999888876664 8999999988
No 154
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.80 E-value=4.1e-07 Score=48.29 Aligned_cols=71 Identities=11% Similarity=0.158 Sum_probs=50.7
Q ss_pred eeEEEECCCCCEEE-EEeCCCeEEEEEcc--CC--ceEEEEeCCccceEEEE-eCCCCeEEEEe-CCCCEEEEe--CCCC
Q psy13945 2 IRCIAVSSSGSWIA-IGQASGVLTLLDLR--TG--TSLASWKGHEGEILQLV-TADDGTLISSS-LDQTISAWH--TNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~-~~~~~~~v~~~~~~--~~--~~~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~~~i~~~~--~~~~ 72 (86)
+..++|+|+++.++ +...++.+.+||+. .+ +....+..+.. +..+. +|++..++.++ .++.+.+|+ ..++
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g 311 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQG 311 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTT
T ss_pred ccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCc
Confidence 34799999998776 55578999999987 22 33344444333 67788 89999877666 679999994 4455
Q ss_pred e
Q psy13945 73 S 73 (86)
Q Consensus 73 ~ 73 (86)
.
T Consensus 312 ~ 312 (343)
T 1ri6_A 312 L 312 (343)
T ss_dssp E
T ss_pred e
Confidence 3
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.77 E-value=3.4e-08 Score=57.46 Aligned_cols=72 Identities=11% Similarity=0.068 Sum_probs=56.3
Q ss_pred eeEEEECCCCCEEEEEeC---------CCeEEEEEccCCceE--EEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSGSWIAIGQA---------SGVLTLLDLRTGTSL--ASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~--~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
+.+++|+|||+.++.++. ++.+++||+.+++.. ..+ ...+..+. +|++..++.+. ++.|++|+.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 568999999999988776 689999999887752 122 24567788 99999988775 779999999
Q ss_pred CCCeEEEe
Q psy13945 70 NDGSLKCN 77 (86)
Q Consensus 70 ~~~~~~~~ 77 (86)
.+++....
T Consensus 138 ~~g~~~~l 145 (719)
T 1z68_A 138 PGDPPFQI 145 (719)
T ss_dssp TTSCCEEC
T ss_pred CCCCcEEE
Confidence 88766543
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.75 E-value=1.2e-07 Score=50.78 Aligned_cols=68 Identities=10% Similarity=0.096 Sum_probs=50.2
Q ss_pred eEEEECCCCCEEEEEeC--CCeEEEEEccCCce--EEEEeCCccceEEEE-eCCCCeEEEEe-CCCCEEEEeCC
Q psy13945 3 RCIAVSSSGSWIAIGQA--SGVLTLLDLRTGTS--LASWKGHEGEILQLV-TADDGTLISSS-LDQTISAWHTN 70 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~--~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~~~i~~~~~~ 70 (86)
..++|+|||++++++.. ++.+.+|++..++. +..+..+...+..+. +|++..++.++ .++.+.+|++.
T Consensus 43 ~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 43 TYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp CCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 46899999994444432 68999999976653 334344556677888 99999887776 77899999985
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.72 E-value=4.1e-08 Score=57.11 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=55.5
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCcc---ceEEEE-eCCCCeEEEEeC---------CCCEEEEeCC
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEG---EILQLV-TADDGTLISSSL---------DQTISAWHTN 70 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~v~~~~-~~~~~~~~~~~~---------~~~i~~~~~~ 70 (86)
.+.|+||+++++. +.++.+++||..+++....+..+.. .+.++. +|++..++.++. ++.+.+||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 5689999965554 4689999999998887666554433 378888 999999987765 6899999998
Q ss_pred CCeE
Q psy13945 71 DGSL 74 (86)
Q Consensus 71 ~~~~ 74 (86)
+++.
T Consensus 99 ~g~~ 102 (719)
T 1z68_A 99 NGEF 102 (719)
T ss_dssp TTEE
T ss_pred CCcc
Confidence 8876
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.72 E-value=1e-06 Score=47.52 Aligned_cols=73 Identities=14% Similarity=0.173 Sum_probs=51.9
Q ss_pred eEEEECCCCCEEEEEeCC--CeEEEEEcc--CCc--eEEEEeCCccceEEEE-eCCCCeEEEEe-CCCCEEEE--eCCCC
Q psy13945 3 RCIAVSSSGSWIAIGQAS--GVLTLLDLR--TGT--SLASWKGHEGEILQLV-TADDGTLISSS-LDQTISAW--HTNDG 72 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~--~~v~~~~~~--~~~--~~~~~~~~~~~v~~~~-~~~~~~~~~~~-~~~~i~~~--~~~~~ 72 (86)
..++|+|||++++.+..+ +.+.+|++. +++ .+..+.. ...+..+. +|++..++.++ .++.+.+| |..++
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC
Confidence 488999999988666554 899999985 344 3334443 44567888 99999887766 67889996 44566
Q ss_pred eEEE
Q psy13945 73 SLKC 76 (86)
Q Consensus 73 ~~~~ 76 (86)
+...
T Consensus 341 ~~~~ 344 (361)
T 3scy_A 341 LLTD 344 (361)
T ss_dssp CEEE
T ss_pred cEee
Confidence 6544
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.70 E-value=6.6e-08 Score=55.19 Aligned_cols=71 Identities=13% Similarity=0.054 Sum_probs=55.0
Q ss_pred eeEEEECCCCCEEEEEeCCC--eEEEEEccCCceEEEEeCCccceE--------EEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASG--VLTLLDLRTGTSLASWKGHEGEIL--------QLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~v~--------~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
+..++|+|||+.++++..++ .|++||..+++.. .+..+...+. ... +|++..++++..++.+++|++
T Consensus 197 ~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~- 274 (582)
T 3o4h_A 197 FSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID- 274 (582)
T ss_dssp EEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET-
T ss_pred cccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE-
Confidence 46789999999999888888 8999999888776 5555543322 223 688888889999999999998
Q ss_pred CCeEE
Q psy13945 71 DGSLK 75 (86)
Q Consensus 71 ~~~~~ 75 (86)
++..
T Consensus 275 -g~~~ 278 (582)
T 3o4h_A 275 -GERV 278 (582)
T ss_dssp -TEEE
T ss_pred -CCee
Confidence 6544
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.69 E-value=2e-07 Score=54.20 Aligned_cols=81 Identities=11% Similarity=0.117 Sum_probs=57.0
Q ss_pred eeEEEECCCCCEEEEEeCCC-----eEEEEEccCCceEEEEe-C-Ccc---ceEEEE-eC--CCCeEEEEeCCCCEEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASG-----VLTLLDLRTGTSLASWK-G-HEG---EILQLV-TA--DDGTLISSSLDQTISAWH 68 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~-~-~~~---~v~~~~-~~--~~~~~~~~~~~~~i~~~~ 68 (86)
+..++|+|||+.++.++.++ .+.+||..+++....+. . ... .+..+. +| ++..++++..++.+++|.
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYL 339 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEE
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEE
Confidence 56899999999888876665 89999998883333222 1 211 234566 88 888888888889999998
Q ss_pred CC-CCeEEEeecCCC
Q psy13945 69 TN-DGSLKCNIQGPT 82 (86)
Q Consensus 69 ~~-~~~~~~~~~~~~ 82 (86)
+. ++..+..+..+.
T Consensus 340 ~~~~~~~~~~l~~~~ 354 (706)
T 2z3z_A 340 YDTTGRLIRQVTKGE 354 (706)
T ss_dssp EETTSCEEEECCCSS
T ss_pred EECCCCEEEecCCCC
Confidence 75 555566665543
No 161
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.69 E-value=9e-07 Score=47.02 Aligned_cols=75 Identities=16% Similarity=0.052 Sum_probs=54.1
Q ss_pred EECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEE-EeCCCCEEEEeCCCCeE-EEeecCC
Q psy13945 6 AVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLIS-SSLDQTISAWHTNDGSL-KCNIQGP 81 (86)
Q Consensus 6 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~-~~~~~~i~~~~~~~~~~-~~~~~~~ 81 (86)
.|.+++ ..+++...++.|.+||..+++.......+.... .+. +|++..++. ...++.|.+||..+++. ...+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 455554 457788889999999999998877766555555 888 899986654 45588999999988776 5555433
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.67 E-value=6.6e-07 Score=51.73 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=54.4
Q ss_pred eeEEEECCCCCEEEEEeCC--------CeEEEEEcc-CC---ceEEEEeCCccceEEEE-eCCCCeEEEEeCCC--CEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQAS--------GVLTLLDLR-TG---TSLASWKGHEGEILQLV-TADDGTLISSSLDQ--TISA 66 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~--------~~v~~~~~~-~~---~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~--~i~~ 66 (86)
+..++|+|||+.|+..+.+ ..|++||+. ++ +.......+...+..+. +|++..++++..++ .|..
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~ 269 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHR 269 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEE
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEE
Confidence 3457899999998876644 479999998 56 33333344467788888 89999777887777 5666
Q ss_pred EeCCCCeEEEeec
Q psy13945 67 WHTNDGSLKCNIQ 79 (86)
Q Consensus 67 ~~~~~~~~~~~~~ 79 (86)
|+..+++......
T Consensus 270 ~~~~~~~~~~l~~ 282 (662)
T 3azo_A 270 VDPATGAATQLCR 282 (662)
T ss_dssp ECTTTCCEEESSC
T ss_pred EECCCCceeeccc
Confidence 6665666554443
No 163
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.66 E-value=2.3e-06 Score=45.65 Aligned_cols=74 Identities=14% Similarity=0.146 Sum_probs=57.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC----CCEEEEeCCCCeEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLD----QTISAWHTNDGSLK 75 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~----~~i~~~~~~~~~~~ 75 (86)
+.+++|++++++++++..++.|.+||..+++...........+.++. .+++.++++...+ +.|.+||..++...
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ 125 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE
Confidence 46789999999888888889999999887776544434556788898 8999888777666 68999998766543
No 164
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.63 E-value=2.1e-06 Score=45.26 Aligned_cols=72 Identities=7% Similarity=-0.145 Sum_probs=58.6
Q ss_pred eeEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 2 IRCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 2 i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
..+++|+++++ +++++..++.|..|+...+ ...+..+...+..+. .+++.++++...++.|.+|+..+++..
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 45789999998 7888888999999998776 555666667788888 899998888777889999999777644
No 165
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.63 E-value=2.2e-06 Score=45.82 Aligned_cols=73 Identities=21% Similarity=0.174 Sum_probs=51.5
Q ss_pred eeEEEECCCCCEEEEEeCC---C--eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeC---------------
Q psy13945 2 IRCIAVSSSGSWIAIGQAS---G--VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSL--------------- 60 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~---~--~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~--------------- 60 (86)
+..+.|+|||+.++..+.+ + .|.++++..++........ . +..+. +|++..++....
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 4678999999988766543 2 4778888777654444333 3 78888 899998876653
Q ss_pred ------------CCCEEEEeCCCCeEEE
Q psy13945 61 ------------DQTISAWHTNDGSLKC 76 (86)
Q Consensus 61 ------------~~~i~~~~~~~~~~~~ 76 (86)
...|.+|++.+++.+.
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp CC---------CEEEEEEEETTTTEEEE
T ss_pred eeecCcccccCccceEEEEECCCCeEEe
Confidence 2568889998887633
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.59 E-value=3e-07 Score=54.06 Aligned_cols=72 Identities=8% Similarity=0.037 Sum_probs=55.5
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccc---e--EEEE-eCCCCeEEEEeCC---------CCEEEE
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGE---I--LQLV-TADDGTLISSSLD---------QTISAW 67 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---v--~~~~-~~~~~~~~~~~~~---------~~i~~~ 67 (86)
..+.|+||+++++++ ++.|++||..+++....+.++... + ..+. +|++..++.+..+ +.+.+|
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 468999999988886 899999999998877666665432 2 2367 8999998877765 456799
Q ss_pred eCCCCeEEE
Q psy13945 68 HTNDGSLKC 76 (86)
Q Consensus 68 ~~~~~~~~~ 76 (86)
|+.+++...
T Consensus 98 d~~~~~~~~ 106 (740)
T 4a5s_A 98 DLNKRQLIT 106 (740)
T ss_dssp ETTTTEECC
T ss_pred ECCCCcEEE
Confidence 999887543
No 167
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.58 E-value=4.9e-06 Score=44.88 Aligned_cols=73 Identities=14% Similarity=0.323 Sum_probs=50.7
Q ss_pred eeEEEECCCCCEEEE-EeCCCeEEEEEccCCc-------eE-----EEE-eCCccceEEEE-eCCCCeEEEEe-CCCCEE
Q psy13945 2 IRCIAVSSSGSWIAI-GQASGVLTLLDLRTGT-------SL-----ASW-KGHEGEILQLV-TADDGTLISSS-LDQTIS 65 (86)
Q Consensus 2 i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~-------~~-----~~~-~~~~~~v~~~~-~~~~~~~~~~~-~~~~i~ 65 (86)
+.+++|+|||+.++. ...++.+.+|++.... .. ... .........+. +|++..++... .++.+.
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 236 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVI 236 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEE
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEE
Confidence 367999999986554 4457899999876433 11 111 22344567788 89998776555 689999
Q ss_pred EEeCCCCeE
Q psy13945 66 AWHTNDGSL 74 (86)
Q Consensus 66 ~~~~~~~~~ 74 (86)
+|++.++..
T Consensus 237 v~~~~~g~~ 245 (361)
T 3scy_A 237 AFRYADGML 245 (361)
T ss_dssp EEEEETTEE
T ss_pred EEEecCCce
Confidence 999987643
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.58 E-value=3.3e-06 Score=44.20 Aligned_cols=69 Identities=12% Similarity=0.213 Sum_probs=51.9
Q ss_pred eeEEEECCCCCEEEEEeCCC-eEEEEEccCCceEEEEeCCc--cceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASG-VLTLLDLRTGTSLASWKGHE--GEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~--~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+..++++++|+++++...++ .|.+|+. .++.+..+..+. .....+. .+++.++++ +.++.|++|++...
T Consensus 209 p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 209 PIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 46789999999888887775 9999994 455555554332 2466788 899887777 57899999998653
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.58 E-value=8e-07 Score=48.42 Aligned_cols=74 Identities=16% Similarity=0.032 Sum_probs=57.1
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEccCCceEEEEeCC------ccceEEEE-eCCCCeEEEEeC--CCCE
Q psy13945 4 CIAVSSSGSWIAIGQ----------ASGVLTLLDLRTGTSLASWKGH------EGEILQLV-TADDGTLISSSL--DQTI 64 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~------~~~v~~~~-~~~~~~~~~~~~--~~~i 64 (86)
.++|+||+++++.+. .++.|.+||..+.+....+... ......+. +|++..++.+.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 689999999988876 3567999999888887666432 12334567 899999887763 6789
Q ss_pred EEEeCCCCeEEEe
Q psy13945 65 SAWHTNDGSLKCN 77 (86)
Q Consensus 65 ~~~~~~~~~~~~~ 77 (86)
.+||..+++.+..
T Consensus 134 ~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 134 GIVDVAKGDYVED 146 (361)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEECCCCcEEEE
Confidence 9999999887776
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.57 E-value=4.4e-07 Score=52.42 Aligned_cols=70 Identities=9% Similarity=-0.006 Sum_probs=52.3
Q ss_pred eeEEEECCCCCEEEEEeCC----------CeEEEEEccC------CceEEEEe-CCccceEEEE-eCCCCeEEEEeCC--
Q psy13945 2 IRCIAVSSSGSWIAIGQAS----------GVLTLLDLRT------GTSLASWK-GHEGEILQLV-TADDGTLISSSLD-- 61 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~------~~~~~~~~-~~~~~v~~~~-~~~~~~~~~~~~~-- 61 (86)
+..++|+|||+.|+.++.+ ..|++||+.. ++. ..+. .+...+..+. +|++..++..+.+
T Consensus 132 ~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~ 210 (662)
T 3azo_A 132 WADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHP 210 (662)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTT
T ss_pred ccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCC
Confidence 4678999999998887766 5899999887 444 3444 4445666777 8999998866644
Q ss_pred ------CCEEEEeCC-CC
Q psy13945 62 ------QTISAWHTN-DG 72 (86)
Q Consensus 62 ------~~i~~~~~~-~~ 72 (86)
..|.+|++. ++
T Consensus 211 ~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 211 RMPWEGTELKTARVTEDG 228 (662)
T ss_dssp CCTTTCEEEEEEEECTTS
T ss_pred CCCCCCcEEEEEEECCCC
Confidence 379999998 56
No 171
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.56 E-value=6.9e-06 Score=47.51 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=59.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEcc--CCceEEEEeCCccceEEEE-e----CCCCeEEEE-eCCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLR--TGTSLASWKGHEGEILQLV-T----ADDGTLISS-SLDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~v~~~~-~----~~~~~~~~~-~~~~~i~~~~~~~~~ 73 (86)
+..+.|+|||+++++++.++.|.++|+. +++....+..... -..+. + |++.+++.+ ..++.+.++|..+.+
T Consensus 199 p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 199 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 4578999999999999999999999985 7777766654333 35666 7 688877655 466899999998888
Q ss_pred EEEeec
Q psy13945 74 LKCNIQ 79 (86)
Q Consensus 74 ~~~~~~ 79 (86)
.+..+.
T Consensus 278 ~~~~i~ 283 (567)
T 1qks_A 278 PKKIQS 283 (567)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 776653
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.54 E-value=6.8e-07 Score=52.58 Aligned_cols=71 Identities=10% Similarity=0.032 Sum_probs=55.9
Q ss_pred EEEECCCCCEEEEEeCC---------CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 4 CIAVSSSGSWIAIGQAS---------GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
...|||||+.++.++.+ +.+.+||+.+++.. .+..+...+.... +|++..++.. .++.|.+|+..++.
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLP 143 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSC
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCc
Confidence 47899999999888775 55679999888753 3455667788888 9999998776 56889999998776
Q ss_pred EEE
Q psy13945 74 LKC 76 (86)
Q Consensus 74 ~~~ 76 (86)
..+
T Consensus 144 ~~~ 146 (740)
T 4a5s_A 144 SYR 146 (740)
T ss_dssp CEE
T ss_pred eEE
Confidence 554
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.53 E-value=5.3e-06 Score=44.52 Aligned_cols=71 Identities=10% Similarity=0.070 Sum_probs=56.9
Q ss_pred eeEEEECCCCCEEEEEeCC------------------------CeEEEEEccCCceEEEEe-CCccceEEEE-eCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQAS------------------------GVLTLLDLRTGTSLASWK-GHEGEILQLV-TADDGTL 55 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~------------------------~~v~~~~~~~~~~~~~~~-~~~~~v~~~~-~~~~~~~ 55 (86)
+.+++++++|+++++...+ +.+.+||..+++....+. ++-.....++ .+++.++
T Consensus 26 v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~ 105 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYW 105 (329)
T ss_dssp EEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEE
T ss_pred ceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEE
Confidence 6789999999999888777 479999988888766554 2334667888 8999988
Q ss_pred EEEeCCCCEEEEeCCCC
Q psy13945 56 ISSSLDQTISAWHTNDG 72 (86)
Q Consensus 56 ~~~~~~~~i~~~~~~~~ 72 (86)
++...++.|..|+....
T Consensus 106 v~d~~~~~v~~~~~~g~ 122 (329)
T 3fvz_A 106 VTDVALHQVFKLDPHSK 122 (329)
T ss_dssp EEETTTTEEEEECTTCS
T ss_pred EEECCCCEEEEEeCCCC
Confidence 88888999999997543
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.52 E-value=5.2e-07 Score=48.88 Aligned_cols=77 Identities=9% Similarity=0.041 Sum_probs=53.4
Q ss_pred eEEEECCCCCEEEEEeCC---CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 3 RCIAVSSSGSWIAIGQAS---GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
..++|+|||+.++..... ..+.+||...++................ +|++..++....+..+.+|++.+++.....
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~ 118 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIY 118 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred ecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEE
Confidence 456799999987765433 4688889887765433332222222255 899999988888889999999887765554
Q ss_pred c
Q psy13945 79 Q 79 (86)
Q Consensus 79 ~ 79 (86)
.
T Consensus 119 ~ 119 (396)
T 3c5m_A 119 T 119 (396)
T ss_dssp E
T ss_pred e
Confidence 4
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.50 E-value=9.8e-06 Score=43.49 Aligned_cols=77 Identities=13% Similarity=0.208 Sum_probs=58.7
Q ss_pred eeEEEECC-CCCEEEEEe-CCCeEEEEEccCCceEEEEeCC----------ccceEEEE-eCC-CCeEEEEeCCCCEEEE
Q psy13945 2 IRCIAVSS-SGSWIAIGQ-ASGVLTLLDLRTGTSLASWKGH----------EGEILQLV-TAD-DGTLISSSLDQTISAW 67 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~----------~~~v~~~~-~~~-~~~~~~~~~~~~i~~~ 67 (86)
...++++| ++.++++.+ .++.|++|+ ..++....+... -.....+. .++ +.++++...++.|++|
T Consensus 145 P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~ 223 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCF 223 (329)
T ss_dssp EEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEE
Confidence 46799999 788888886 689999999 556665554321 12367788 888 7788888889999999
Q ss_pred eCCCCeEEEeec
Q psy13945 68 HTNDGSLKCNIQ 79 (86)
Q Consensus 68 ~~~~~~~~~~~~ 79 (86)
+..+++.+..+.
T Consensus 224 ~~~~G~~~~~~~ 235 (329)
T 3fvz_A 224 KTDTKEFVREIK 235 (329)
T ss_dssp ETTTCCEEEEEC
T ss_pred ECCCCcEEEEEe
Confidence 998788777663
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.49 E-value=2.6e-06 Score=49.94 Aligned_cols=71 Identities=14% Similarity=0.205 Sum_probs=51.5
Q ss_pred eeEEEECCCCCEEEEEeCCC-----eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCC------------
Q psy13945 2 IRCIAVSSSGSWIAIGQASG-----VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQT------------ 63 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~------------ 63 (86)
+..++|+|||++++.+..++ .|++||+.+++....... ...+..+. +|++..++.+..+..
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 46789999999887655433 899999998887543222 22255677 899998887766554
Q ss_pred ----EEEEeCCCCe
Q psy13945 64 ----ISAWHTNDGS 73 (86)
Q Consensus 64 ----i~~~~~~~~~ 73 (86)
|.+|++.++.
T Consensus 206 ~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQ 219 (710)
T ss_dssp CCCEEEEEETTSCG
T ss_pred CCCEEEEEECCCCc
Confidence 9999987654
No 177
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.48 E-value=1.3e-05 Score=41.92 Aligned_cols=76 Identities=12% Similarity=0.239 Sum_probs=56.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC--ccceEEEE-eCCCCeEEEEeCCC-CEEEEeCCCCeEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH--EGEILQLV-TADDGTLISSSLDQ-TISAWHTNDGSLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~v~~~~-~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~ 77 (86)
+.+++++++++++++...++.|.+||. .++....+... ......+. .+++..+++...++ .|.+|+. +++.+..
T Consensus 166 p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~ 243 (286)
T 1q7f_A 166 PNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISA 243 (286)
T ss_dssp EEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEE
T ss_pred cEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEE
Confidence 568999999998888888899999996 45555555433 24667888 88998888888776 9999995 4555555
Q ss_pred ec
Q psy13945 78 IQ 79 (86)
Q Consensus 78 ~~ 79 (86)
+.
T Consensus 244 ~~ 245 (286)
T 1q7f_A 244 LE 245 (286)
T ss_dssp EE
T ss_pred Ec
Confidence 43
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.47 E-value=9.8e-07 Score=51.60 Aligned_cols=71 Identities=20% Similarity=0.161 Sum_probs=50.6
Q ss_pred eeEEEECCCCCEEE-----EEeCCCeEEEEEccCCceE-EEEeCCccceEEEE-eCCCCeEEEEeCCCC-----------
Q psy13945 2 IRCIAVSSSGSWIA-----IGQASGVLTLLDLRTGTSL-ASWKGHEGEILQLV-TADDGTLISSSLDQT----------- 63 (86)
Q Consensus 2 i~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~-~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~----------- 63 (86)
+..++|||||++++ .|+.+..|++||+.+++.. .... .......+. +|++..++..+.+..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~ 201 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGY 201 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccccCCCC
Confidence 56789999999888 3444578999999988764 1111 111114567 899999888877665
Q ss_pred --EEEEeCCCCe
Q psy13945 64 --ISAWHTNDGS 73 (86)
Q Consensus 64 --i~~~~~~~~~ 73 (86)
|.+|++.++.
T Consensus 202 ~~v~~~~l~t~~ 213 (695)
T 2bkl_A 202 TTIRYHTLGTEP 213 (695)
T ss_dssp CEEEEEETTSCG
T ss_pred CEEEEEECCCCc
Confidence 9999987664
No 179
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.46 E-value=1e-05 Score=43.95 Aligned_cols=72 Identities=8% Similarity=0.029 Sum_probs=52.1
Q ss_pred eeEEEECCCCCEEEEEeC-CCeEEEEEcc-CCceE--EEEe--CCccceEEEE-eCCCCeEEEEe-CCCCEEEEeCC--C
Q psy13945 2 IRCIAVSSSGSWIAIGQA-SGVLTLLDLR-TGTSL--ASWK--GHEGEILQLV-TADDGTLISSS-LDQTISAWHTN--D 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~-~~~v~~~~~~-~~~~~--~~~~--~~~~~v~~~~-~~~~~~~~~~~-~~~~i~~~~~~--~ 71 (86)
+.+++|+|||+++++++. +..|.+|+.. +++.. ..+. .+......+. +|++..++... .++.+.+|++. +
T Consensus 147 ~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC
Confidence 568999999998776654 6799999987 66643 2333 1245577888 99998887665 46889999764 4
Q ss_pred Ce
Q psy13945 72 GS 73 (86)
Q Consensus 72 ~~ 73 (86)
++
T Consensus 227 g~ 228 (365)
T 1jof_A 227 HM 228 (365)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 180
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.46 E-value=1.2e-06 Score=47.51 Aligned_cols=71 Identities=10% Similarity=0.063 Sum_probs=49.2
Q ss_pred eeEEE-ECCCCCEEEEEeCCC------eEEEEEcc-CCceEE---EEeCCccceEEEE-eC---CCCeEEEEeC-CCCEE
Q psy13945 2 IRCIA-VSSSGSWIAIGQASG------VLTLLDLR-TGTSLA---SWKGHEGEILQLV-TA---DDGTLISSSL-DQTIS 65 (86)
Q Consensus 2 i~~~~-~~~~~~~~~~~~~~~------~v~~~~~~-~~~~~~---~~~~~~~~v~~~~-~~---~~~~~~~~~~-~~~i~ 65 (86)
+..++ |+|||++++++.... .+.+|++. +++... ....+......+. +| ++..++.+.. ++.|.
T Consensus 256 ~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 256 RADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLE 335 (365)
T ss_dssp EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred cccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEE
Confidence 45788 999999887665433 89999986 555432 1222333344566 77 7888888776 48999
Q ss_pred EEeCCCC
Q psy13945 66 AWHTNDG 72 (86)
Q Consensus 66 ~~~~~~~ 72 (86)
+|++...
T Consensus 336 v~~~~~~ 342 (365)
T 1jof_A 336 IYRWKDE 342 (365)
T ss_dssp EEEEETT
T ss_pred EEEEchh
Confidence 9988655
No 181
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.44 E-value=8.8e-06 Score=45.16 Aligned_cols=67 Identities=19% Similarity=0.244 Sum_probs=43.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
|+.++| |+..++.+ .++.|++||+...........+...+..+. .+. .++.+..|+.+.+||+.++.
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~ 157 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS 157 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCC
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCc
Confidence 567778 77777777 678888888765554444444555565554 221 26677777888888876554
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.40 E-value=7.1e-06 Score=43.31 Aligned_cols=68 Identities=15% Similarity=0.114 Sum_probs=55.6
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCc-cceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHE-GEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
.++.+++++.++.+.+||..+++.+-.+..+. ..+.++. .|++..++ +.+..+..||. +++.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC
Confidence 46889999999999999988999988777654 4667788 89999888 45677999998 7888877764
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.36 E-value=3.2e-05 Score=40.70 Aligned_cols=77 Identities=14% Similarity=0.124 Sum_probs=54.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEcc-CCce---EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLR-TGTS---LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~---~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 76 (86)
...++|+||++.+++...++.+.+|+.. .++. ...+.........+. .+++.++++. ++.|.+|+.. ++.+.
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~ 250 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELG 250 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEE
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEE
Confidence 4678999999988777778899999986 4544 223322334455677 8888877666 7889999976 66666
Q ss_pred eecCC
Q psy13945 77 NIQGP 81 (86)
Q Consensus 77 ~~~~~ 81 (86)
.+..+
T Consensus 251 ~~~~~ 255 (296)
T 3e5z_A 251 RVLTP 255 (296)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 65543
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.34 E-value=1.3e-05 Score=42.39 Aligned_cols=73 Identities=12% Similarity=0.135 Sum_probs=59.5
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+++.++|+++++...++.+..||.. ++.+-.+... ....+.. .+++..+++...++.+..+|..+++.+..+.
T Consensus 130 v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 130 INKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp CEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred ceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 4567899999999999999999987 8887776654 3344556 7889999988888899999999899888775
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.24 E-value=1.8e-05 Score=46.47 Aligned_cols=69 Identities=13% Similarity=-0.026 Sum_probs=49.7
Q ss_pred eEEEECCCCCEEEEEeCCCe----------------EEEEEccCCceE--EEEeC--CccceEEEE-eCCCCeEEEEeC-
Q psy13945 3 RCIAVSSSGSWIAIGQASGV----------------LTLLDLRTGTSL--ASWKG--HEGEILQLV-TADDGTLISSSL- 60 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~--~~~~~--~~~~v~~~~-~~~~~~~~~~~~- 60 (86)
..++|+|||+.|+.+..+.. |++|++.++... ..+.. +...+..+. +|++..++....
T Consensus 174 ~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 253 (710)
T 2xdw_A 174 SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE 253 (710)
T ss_dssp CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEc
Confidence 46899999998887776655 999998876532 22232 334567778 999998876543
Q ss_pred ----CCCEEEEeCCC
Q psy13945 61 ----DQTISAWHTND 71 (86)
Q Consensus 61 ----~~~i~~~~~~~ 71 (86)
+..+.+||+.+
T Consensus 254 ~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 254 GCDPVNRLWYCDLQQ 268 (710)
T ss_dssp SSSSCCEEEEEEGGG
T ss_pred cCCCccEEEEEECcc
Confidence 56899999875
No 186
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.22 E-value=1.7e-05 Score=44.07 Aligned_cols=76 Identities=17% Similarity=0.126 Sum_probs=56.7
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEccCCceEEEEeCCc-------cceEEEE-eCCCCeEEEEeC--CCC
Q psy13945 4 CIAVSSSGSWIAIGQ----------ASGVLTLLDLRTGTSLASWKGHE-------GEILQLV-TADDGTLISSSL--DQT 63 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~-------~~v~~~~-~~~~~~~~~~~~--~~~ 63 (86)
.++++|||+.++.+. .+..|.+||..+.+....+.... ..-..+. +|++..++.... ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 388999999877654 35789999999998877664211 1223456 899998876653 688
Q ss_pred EEEEeCCCCeEEEeec
Q psy13945 64 ISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 64 i~~~~~~~~~~~~~~~ 79 (86)
+.++|..+++.+..+.
T Consensus 162 VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLD 177 (386)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEECCCCcEEEEEE
Confidence 9999999998877663
No 187
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.19 E-value=0.00011 Score=40.48 Aligned_cols=73 Identities=14% Similarity=0.115 Sum_probs=56.3
Q ss_pred EEECCCCCEEEEEeC----------CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCC-eEEEEe-CCCCEEEEeCCC
Q psy13945 5 IAVSSSGSWIAIGQA----------SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDG-TLISSS-LDQTISAWHTND 71 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~-~~~~i~~~~~~~ 71 (86)
+.+++|+..++.... .+.|.++|..+++.+..+... .....+. ++++. .++++. .++.|.++|..+
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 678888877666543 357999999999988877543 3457788 89988 677766 589999999999
Q ss_pred CeEEEee
Q psy13945 72 GSLKCNI 78 (86)
Q Consensus 72 ~~~~~~~ 78 (86)
++.+..+
T Consensus 351 ~~vv~~i 357 (373)
T 2mad_H 351 GDQDQST 357 (373)
T ss_pred CCEEeee
Confidence 9888773
No 188
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.16 E-value=0.00011 Score=39.85 Aligned_cols=74 Identities=12% Similarity=-0.046 Sum_probs=53.0
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEE--EE-eCCCCeEEEE----------------------
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQ--LV-TADDGTLISS---------------------- 58 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~--~~-~~~~~~~~~~---------------------- 58 (86)
...|+||++.|+.++.+..+++||+.+++.......+...+.. .. ++++..++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 4579999999999998999999999988876655555443322 23 6778777632
Q ss_pred eCCCCEEEEeCCCCeEEEe
Q psy13945 59 SLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 59 ~~~~~i~~~~~~~~~~~~~ 77 (86)
..+..|.+||+.+++....
T Consensus 165 ~~~~~l~~~d~~~g~~~~l 183 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVI 183 (388)
T ss_dssp CCCEEEEEEETTTCCEEEE
T ss_pred CCcceEEEEECCCCceEEe
Confidence 2346788999888765443
No 189
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.16 E-value=7.4e-05 Score=41.55 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=51.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeE--EEee
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSL--KCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~ 78 (86)
+.++.+.+. .++....+|.+.+||+..+.... ....|.+++ +|++ ++.+..|+.+++|+...+.. ..++
T Consensus 129 v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I 200 (388)
T 1xip_A 129 VFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEF 200 (388)
T ss_dssp EEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred eeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcccccccee
Confidence 344555443 37778899999999998776532 345789999 9998 67788999999998877765 4445
No 190
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.15 E-value=0.00013 Score=40.20 Aligned_cols=73 Identities=15% Similarity=0.073 Sum_probs=54.2
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEccCCceEEEEeCC-------ccceEEEE-eCCCCeEEEEeC--CCC
Q psy13945 4 CIAVSSSGSWIAIGQ----------ASGVLTLLDLRTGTSLASWKGH-------EGEILQLV-TADDGTLISSSL--DQT 63 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~-------~~~v~~~~-~~~~~~~~~~~~--~~~ 63 (86)
.++++||++.++.+. .+..+.++|..+.+....+... ...-..+. +|++..++.+.. +..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 688999999888775 3578999999888776655322 11223567 899999887763 578
Q ss_pred EEEEeCCCCeEEEe
Q psy13945 64 ISAWHTNDGSLKCN 77 (86)
Q Consensus 64 i~~~~~~~~~~~~~ 77 (86)
|.++| .+++.+..
T Consensus 150 v~viD-~t~~~~~~ 162 (373)
T 2mad_H 150 VGLVV-QGGSSDDQ 162 (373)
T ss_pred EEEEE-CCCCEEeE
Confidence 99999 98887766
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.15 E-value=5.4e-05 Score=41.01 Aligned_cols=70 Identities=13% Similarity=-0.048 Sum_probs=46.4
Q ss_pred eeEEEECCCCCEEEEEeCC-----CeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEe---------------
Q psy13945 2 IRCIAVSSSGSWIAIGQAS-----GVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSS--------------- 59 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~--------------- 59 (86)
+..+.|+|||+.++..+.+ +.|++||+.+++........ . .. .. +| ++..++...
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP-P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC-S-EE-EEEECSSSSEEEEEECCC----------CC
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC-C-CC-CCccCCCCceEEEecCCcceeecccccccc
Confidence 4567999999876655433 45999998877653322211 1 22 56 77 888877654
Q ss_pred -CCCCEEEEeCCCCeE
Q psy13945 60 -LDQTISAWHTNDGSL 74 (86)
Q Consensus 60 -~~~~i~~~~~~~~~~ 74 (86)
.+..+.+||..+++.
T Consensus 317 ~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 317 ENDPFLYVLNTKAKSA 332 (396)
T ss_dssp CCCCEEEEEETTTTBC
T ss_pred CCCCcEEEEecccCce
Confidence 346799999887653
No 192
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.15 E-value=7.2e-06 Score=44.90 Aligned_cols=68 Identities=13% Similarity=0.226 Sum_probs=45.2
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
++..+++++.++.+..||..+++..-.+.. ..+.+.. ..++..++.++.|+.+..||..+++.+..+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~ 76 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLP 76 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECS
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeee
Confidence 577888999999999999999988766554 3333333 4566677888899999999998887665543
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.14 E-value=4.4e-05 Score=39.47 Aligned_cols=71 Identities=13% Similarity=0.036 Sum_probs=53.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+.++++.++|.++++...++.|.+|+...................+. .+++..+++...++.|.+++....
T Consensus 194 p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 194 PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred ceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 46789999998888877788999999765443322222234577888 888988889899999999987643
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.12 E-value=5.2e-05 Score=40.79 Aligned_cols=75 Identities=4% Similarity=0.043 Sum_probs=53.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEE-E-eCCccceEEEE-eC-CCCeEEEE----eCCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLAS-W-KGHEGEILQLV-TA-DDGTLISS----SLDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~-~~~~~~v~~~~-~~-~~~~~~~~----~~~~~i~~~~~~~~~ 73 (86)
...++++|++..++.... .+.++|..+++.... + .........+. .| ++..+++. ..++.|.+|+.. ++
T Consensus 227 p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp CEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred ceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 467899999988887764 899999887765321 1 11134567788 87 56677776 677899999987 77
Q ss_pred EEEeec
Q psy13945 74 LKCNIQ 79 (86)
Q Consensus 74 ~~~~~~ 79 (86)
.+..+.
T Consensus 304 ~~~~i~ 309 (328)
T 3dsm_A 304 LIDEFY 309 (328)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666553
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.11 E-value=4.8e-05 Score=44.67 Aligned_cols=71 Identities=13% Similarity=-0.003 Sum_probs=49.4
Q ss_pred eEEEECCCCCEEEEEeCCCe-------------EEEEEccCCce--EEEEe--CCccceEEEE-eCCCCeEEEEeCCC--
Q psy13945 3 RCIAVSSSGSWIAIGQASGV-------------LTLLDLRTGTS--LASWK--GHEGEILQLV-TADDGTLISSSLDQ-- 62 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-------------v~~~~~~~~~~--~~~~~--~~~~~v~~~~-~~~~~~~~~~~~~~-- 62 (86)
..++|+|||+.|+.++.+.. |++|++.++.. ...+. .+...+..+. +|++..++..+.+.
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 46789999999888877665 99999887653 22222 2345677888 99999887665544
Q ss_pred --CEEEEeCCCCe
Q psy13945 63 --TISAWHTNDGS 73 (86)
Q Consensus 63 --~i~~~~~~~~~ 73 (86)
.+.+++..++.
T Consensus 251 ~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 251 ENDVYWKRPGEKD 263 (695)
T ss_dssp EEEEEEECTTCSS
T ss_pred ceEEEEEcCCCCc
Confidence 56666654443
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.10 E-value=0.00015 Score=38.22 Aligned_cols=70 Identities=4% Similarity=0.042 Sum_probs=53.6
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCC-eEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDG-TLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~~ 71 (86)
...++++++|++.++...++.|..||..+++....+..+...+.++. .+++. ++++...++.|..++...
T Consensus 228 p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 35678899999888877788999999876766666655556778888 88888 555666678898888764
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.09 E-value=0.00017 Score=38.19 Aligned_cols=79 Identities=13% Similarity=0.045 Sum_probs=55.9
Q ss_pred eEEEECCCCCEE-EEEeCCCeEEEEEc--cCCceE--E---EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 3 RCIAVSSSGSWI-AIGQASGVLTLLDL--RTGTSL--A---SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 3 ~~~~~~~~~~~~-~~~~~~~~v~~~~~--~~~~~~--~---~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
..++|+||++.+ ++....+.|.+|+. .++... . .+.........+. .+++.++++....+.|..|+..+++
T Consensus 152 ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred cceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 578999999865 55666788999987 345432 1 1122234556777 7889888888788889999998888
Q ss_pred EEEeecCC
Q psy13945 74 LKCNIQGP 81 (86)
Q Consensus 74 ~~~~~~~~ 81 (86)
.+..+..+
T Consensus 232 ~~~~i~~p 239 (297)
T 3g4e_A 232 RLQTVKLP 239 (297)
T ss_dssp EEEEEECS
T ss_pred EEEEEECC
Confidence 77776544
No 198
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.08 E-value=0.00017 Score=39.87 Aligned_cols=75 Identities=8% Similarity=0.071 Sum_probs=56.5
Q ss_pred EEECCCCCEEEEEeC---------CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCC-eEEEEe-CCCCEEEEeCCCC
Q psy13945 5 IAVSSSGSWIAIGQA---------SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDG-TLISSS-LDQTISAWHTNDG 72 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~-~~~~i~~~~~~~~ 72 (86)
+++++|+..++.+.. ...+.++|..+.+.+.++.... ....+. ++++. .+++.. .++.+.++|..++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 678999887775432 2356699999998877765432 456778 88887 566766 5999999999999
Q ss_pred eEEEeecC
Q psy13945 73 SLKCNIQG 80 (86)
Q Consensus 73 ~~~~~~~~ 80 (86)
+.+..+.-
T Consensus 348 kvv~~I~v 355 (368)
T 1mda_H 348 QDQSSVEL 355 (368)
T ss_dssp EEEEECCC
T ss_pred cEEEEEEC
Confidence 99988754
No 199
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.06 E-value=0.00013 Score=37.73 Aligned_cols=72 Identities=7% Similarity=0.031 Sum_probs=53.0
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
+.+++++++++++++...++.|.+||...................+. .+++..+++...++.|..|+.....
T Consensus 152 p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 152 PDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred ceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 35688999999877777788999999776554332223335567888 8888888888888899999986543
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.99 E-value=0.00033 Score=37.72 Aligned_cols=75 Identities=13% Similarity=0.127 Sum_probs=55.4
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
..+.+. +++++++...++.+.++|..+++.+..+.. ......+. ++++..+++...++.|.++|..+++....+.
T Consensus 47 ~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 47 QSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp EEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred eEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 345553 456666777789999999999998877753 34456777 6888665666588999999999988776654
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.99 E-value=0.00022 Score=41.41 Aligned_cols=69 Identities=12% Similarity=0.027 Sum_probs=54.4
Q ss_pred CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC--CCeEEEeec
Q psy13945 10 SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN--DGSLKCNIQ 79 (86)
Q Consensus 10 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~ 79 (86)
++.++++...++.+.++|..+++.+..+... .....+. +|++..++.++.++.|.+||+. +++.+..+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 3456778888899999999999988777642 3456778 9999999888899999999995 666555553
No 202
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.93 E-value=0.00044 Score=37.40 Aligned_cols=80 Identities=13% Similarity=-0.016 Sum_probs=56.6
Q ss_pred eeEEEECCCCCEEEEEeC-----CCeEEEEEccCCceEEEEeCC------ccceEEEE-eCC-CCeEEEEe---CCCCEE
Q psy13945 2 IRCIAVSSSGSWIAIGQA-----SGVLTLLDLRTGTSLASWKGH------EGEILQLV-TAD-DGTLISSS---LDQTIS 65 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~------~~~v~~~~-~~~-~~~~~~~~---~~~~i~ 65 (86)
+.++++++++++.++... ...|.+||..+++....+... ......+. .++ +..+++.. .++.|.
T Consensus 69 p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~ 148 (343)
T 2qe8_A 69 VLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALI 148 (343)
T ss_dssp EEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEE
T ss_pred eeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEE
Confidence 578999999987776543 578999999888876655422 12346677 765 45556655 678999
Q ss_pred EEeCCCCeEEEeecCC
Q psy13945 66 AWHTNDGSLKCNIQGP 81 (86)
Q Consensus 66 ~~~~~~~~~~~~~~~~ 81 (86)
+||..+++....+.+|
T Consensus 149 v~d~~~g~~~r~~~~~ 164 (343)
T 2qe8_A 149 RVDLQTGLAARVLQGY 164 (343)
T ss_dssp EEETTTCCEEEECTTC
T ss_pred EEECCCCCEEEEecCC
Confidence 9999888776666543
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.92 E-value=0.00018 Score=40.51 Aligned_cols=73 Identities=19% Similarity=0.173 Sum_probs=56.5
Q ss_pred EEECCCCCEEEEEeC----------CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCC-eEEEEe-CCCCEEEEeCCC
Q psy13945 5 IAVSSSGSWIAIGQA----------SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDG-TLISSS-LDQTISAWHTND 71 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~-~~~~i~~~~~~~ 71 (86)
+++++|+..++.... .+.|.+.|..+.+.+.++.... ....+. ++++. .+++.. .++.|.++|..+
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 678888876665432 3579999999999988775422 356777 89988 777776 589999999999
Q ss_pred CeEEEee
Q psy13945 72 GSLKCNI 78 (86)
Q Consensus 72 ~~~~~~~ 78 (86)
++.+..+
T Consensus 403 ~kvv~tI 409 (426)
T 3c75_H 403 GEELRSV 409 (426)
T ss_dssp CCEEEEE
T ss_pred CCEEEEe
Confidence 9988876
No 204
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.91 E-value=0.00011 Score=41.39 Aligned_cols=76 Identities=12% Similarity=0.091 Sum_probs=55.9
Q ss_pred EEEECCCCCEEEEEe----------CCCeEEEEEccCCceEEEEeCC-------ccceEEEE-eCCCCeEEEEeC--CCC
Q psy13945 4 CIAVSSSGSWIAIGQ----------ASGVLTLLDLRTGTSLASWKGH-------EGEILQLV-TADDGTLISSSL--DQT 63 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~-------~~~v~~~~-~~~~~~~~~~~~--~~~ 63 (86)
.+.++||++.++.+. .++.|.++|..+.+....+.-. ...-..+. +|++..++.+.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 688999998777665 4678999999999887765421 11123455 899988877653 578
Q ss_pred EEEEeCCCCeEEEeec
Q psy13945 64 ISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 64 i~~~~~~~~~~~~~~~ 79 (86)
|.+.|..+++.+..+.
T Consensus 202 VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLD 217 (426)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEECCCCeEEEEEE
Confidence 9999999988776653
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.91 E-value=0.0001 Score=43.64 Aligned_cols=70 Identities=16% Similarity=0.194 Sum_probs=46.3
Q ss_pred eeEEEECCCCCEEEEEeCC-----CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCC-------------
Q psy13945 2 IRCIAVSSSGSWIAIGQAS-----GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQ------------- 62 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~------------- 62 (86)
+..++|+|||++++.+..+ ..|++||+.+++.... ......+..+. +|+ ..++....+.
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 4578999999988765543 4699999998876432 11112224566 788 7776655443
Q ss_pred -CEEEEeCCCCe
Q psy13945 63 -TISAWHTNDGS 73 (86)
Q Consensus 63 -~i~~~~~~~~~ 73 (86)
.|.+|++.++.
T Consensus 243 ~~v~~~~lgt~~ 254 (741)
T 1yr2_A 243 QTVWLHRLGTPQ 254 (741)
T ss_dssp CEEEEEETTSCG
T ss_pred CEEEEEECCCCc
Confidence 38888876553
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.81 E-value=0.00045 Score=38.51 Aligned_cols=71 Identities=11% Similarity=0.070 Sum_probs=54.7
Q ss_pred EECCCCCEEEEEeC-----CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEe----------CCCCEEEEeC
Q psy13945 6 AVSSSGSWIAIGQA-----SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSS----------LDQTISAWHT 69 (86)
Q Consensus 6 ~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~----------~~~~i~~~~~ 69 (86)
...|+++.++.... ++.+.++|..+++.+..+.....+ . +. +|++..++.+. .+..|.+||.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34688888887765 578999999999988877644444 3 77 99998876554 3578999999
Q ss_pred CCCeEEEee
Q psy13945 70 NDGSLKCNI 78 (86)
Q Consensus 70 ~~~~~~~~~ 78 (86)
.+++.+..+
T Consensus 117 ~t~~v~~~I 125 (386)
T 3sjl_D 117 VTLLPTADI 125 (386)
T ss_dssp TTCCEEEEE
T ss_pred CCCeEEEEE
Confidence 998877765
No 207
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.80 E-value=0.00044 Score=41.01 Aligned_cols=61 Identities=11% Similarity=-0.014 Sum_probs=43.2
Q ss_pred CeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecCC
Q psy13945 21 GVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQGP 81 (86)
Q Consensus 21 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (86)
+.+..||..+++..=....+...........+..++.++.|+.++.||.++|+.+..+...
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 7799999999987654443221111111335667778899999999999999999888643
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.77 E-value=0.00073 Score=35.62 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=50.8
Q ss_pred eEEEEC----CCCCEE-EEEeCCCeEEEEEcc-CCce-----EEEEeCCc-cceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 3 RCIAVS----SSGSWI-AIGQASGVLTLLDLR-TGTS-----LASWKGHE-GEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 3 ~~~~~~----~~~~~~-~~~~~~~~v~~~~~~-~~~~-----~~~~~~~~-~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
..++++ ++++.+ ++...++.|.+|+.. .++. ...+..+. .....+. .+++..+++...++.|..|+.
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcC
Confidence 467888 888654 444567899999976 3432 12222222 4456777 888988888878889999998
Q ss_pred CCCeEEEee
Q psy13945 70 NDGSLKCNI 78 (86)
Q Consensus 70 ~~~~~~~~~ 78 (86)
.+++.+..+
T Consensus 255 ~~g~~~~~~ 263 (314)
T 1pjx_A 255 DGGQPKMRI 263 (314)
T ss_dssp TCBSCSEEE
T ss_pred CCCcEeEEE
Confidence 755544443
No 209
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.73 E-value=0.001 Score=35.55 Aligned_cols=72 Identities=8% Similarity=0.040 Sum_probs=49.1
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCE-EEEeCCCCeEEEeecCCC
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTI-SAWHTNDGSLKCNIQGPT 82 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~ 82 (86)
+.|+ |+ +++++..++...+| +.+++. ..+..+...+..+. ++ ..++++..+... .+|.+. ++ ...+..|.
T Consensus 269 ~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n 340 (347)
T 2gop_A 269 KIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYN 340 (347)
T ss_dssp EEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTT
T ss_pred cEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEecccc
Confidence 7899 88 88888999999999 775554 33344466777887 77 666666666544 677665 54 44465655
Q ss_pred CC
Q psy13945 83 EP 84 (86)
Q Consensus 83 ~~ 84 (86)
..
T Consensus 341 ~~ 342 (347)
T 2gop_A 341 DP 342 (347)
T ss_dssp ST
T ss_pred Hh
Confidence 43
No 210
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.67 E-value=0.0013 Score=35.03 Aligned_cols=71 Identities=8% Similarity=-0.050 Sum_probs=48.3
Q ss_pred eeEEEECCCCCEEEEEeCC----CeEEEEEccCCceEEEEe--CCccceEEEE-eCCCCeEEEEeC------CCCEEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQAS----GVLTLLDLRTGTSLASWK--GHEGEILQLV-TADDGTLISSSL------DQTISAWH 68 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~--~~~~~v~~~~-~~~~~~~~~~~~------~~~i~~~~ 68 (86)
+.+++++++++++++...+ +.|.+||...+.....+. .....+..+. .+++..+++... .+.|..++
T Consensus 89 ~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~ 168 (333)
T 2dg1_A 89 PAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVS 168 (333)
T ss_dssp EEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEEC
T ss_pred cceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEe
Confidence 5789999999988877666 689999987666543332 2334677888 888888776653 24455555
Q ss_pred CCCC
Q psy13945 69 TNDG 72 (86)
Q Consensus 69 ~~~~ 72 (86)
...+
T Consensus 169 ~~~~ 172 (333)
T 2dg1_A 169 PDFR 172 (333)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 5443
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.65 E-value=0.0017 Score=36.17 Aligned_cols=70 Identities=16% Similarity=0.183 Sum_probs=50.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCC--CEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQ--TISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~--~i~~~~~~~~~ 73 (86)
...++++++++++++...++.|+.||...+........... .. +. .+++..++.+..++ .|..++...+.
T Consensus 133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred ceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 46789999999888887789999999887766544443222 23 66 88888777776654 67777766543
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.64 E-value=0.00036 Score=41.20 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=44.6
Q ss_pred eeEEEECCCCCEEEE-----EeCCCeEEEEEccCCceEEE-EeCCccceEEEE-eCCCCeEEEEeCC-------------
Q psy13945 2 IRCIAVSSSGSWIAI-----GQASGVLTLLDLRTGTSLAS-WKGHEGEILQLV-TADDGTLISSSLD------------- 61 (86)
Q Consensus 2 i~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~~~~~~~------------- 61 (86)
+..++|||||++++- |++...|+++|+.+++.... +.. .+...+. + ++..++....+
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 567899999998773 33346799999998886432 211 1123455 7 77777665554
Q ss_pred CCEEEEeCCCC
Q psy13945 62 QTISAWHTNDG 72 (86)
Q Consensus 62 ~~i~~~~~~~~ 72 (86)
..|.+|++.++
T Consensus 208 ~~v~~~~lgt~ 218 (693)
T 3iuj_A 208 HKVYFHRLGTA 218 (693)
T ss_dssp CEEEEEETTSC
T ss_pred cEEEEEECCCC
Confidence 34888887654
No 213
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.62 E-value=0.0008 Score=39.86 Aligned_cols=59 Identities=15% Similarity=0.084 Sum_probs=42.3
Q ss_pred CeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 21 GVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 21 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+.|..||..+++..-..... ....... ...+..++.++.++.+++||.++++.+..+.-
T Consensus 457 g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC
Confidence 78999999998875444322 2222222 34556677788999999999999999988864
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.59 E-value=0.0034 Score=37.42 Aligned_cols=71 Identities=15% Similarity=0.154 Sum_probs=45.4
Q ss_pred eeEEEECCCCCEEEEEeCC-----CeEEEEEccCC--ceEEEEeCCccceEEEEeCCCCeEEEEeC----CCCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQAS-----GVLTLLDLRTG--TSLASWKGHEGEILQLVTADDGTLISSSL----DQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~i~~~~~~ 70 (86)
+..+.|+|||++++....+ ..+++||+.++ +....+..+...+.....+++..++..+. +..|.+|++.
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 4678999999987766644 38999998776 31344444433333333566776665543 3458899987
Q ss_pred CC
Q psy13945 71 DG 72 (86)
Q Consensus 71 ~~ 72 (86)
++
T Consensus 350 ~~ 351 (741)
T 1yr2_A 350 GS 351 (741)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 215
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.58 E-value=0.0019 Score=34.33 Aligned_cols=77 Identities=10% Similarity=-0.027 Sum_probs=54.1
Q ss_pred eeEEEECCCCCEEEEEeC--CCeEEEEEccCCceEEEEeCCcc-ceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQA--SGVLTLLDLRTGTSLASWKGHEG-EILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~-~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
...+.|++|++++++.+. +..|.++|..+++....+.-... ..-.+. . .+..+++...++.+.++|..+.+.+..
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEE
Confidence 357899998776666553 57999999999998877653221 222333 3 234555666788999999999888877
Q ss_pred ec
Q psy13945 78 IQ 79 (86)
Q Consensus 78 ~~ 79 (86)
+.
T Consensus 102 i~ 103 (266)
T 2iwa_A 102 FT 103 (266)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 216
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.51 E-value=0.0025 Score=33.86 Aligned_cols=76 Identities=8% Similarity=0.018 Sum_probs=52.5
Q ss_pred eEEEECCCCCEEEEEeCCC--eEEEEEccCCceEEEEeCCccceEEEE-eCCC-CeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 3 RCIAVSSSGSWIAIGQASG--VLTLLDLRTGTSLASWKGHEGEILQLV-TADD-GTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
..+.|+ ++.++.+.+.++ .|+++|..+++......-.. ..+..- .+.+ ..+.....++.+.++|..+.+.+.++
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred ceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 467787 677777777765 89999999999887765432 222221 2233 44445556788999999998888777
Q ss_pred cC
Q psy13945 79 QG 80 (86)
Q Consensus 79 ~~ 80 (86)
..
T Consensus 124 ~~ 125 (262)
T 3nol_A 124 NY 125 (262)
T ss_dssp EC
T ss_pred EC
Confidence 53
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.44 E-value=0.0024 Score=34.56 Aligned_cols=77 Identities=12% Similarity=0.119 Sum_probs=49.4
Q ss_pred eeEEEECCCCCEEEEEeC--CCeEEEEEccCCceEEEEe-------CCccceEEEE-eCCCCeEEEEeC-----CCCEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQA--SGVLTLLDLRTGTSLASWK-------GHEGEILQLV-TADDGTLISSSL-----DQTISA 66 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~-------~~~~~v~~~~-~~~~~~~~~~~~-----~~~i~~ 66 (86)
...++++++|+.+++... ++..++|.+..++.. .+. .+...+..+. .+++.+++.-.. +..|.+
T Consensus 19 p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~ 97 (343)
T 2qe8_A 19 PGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVA 97 (343)
T ss_dssp EEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEE
T ss_pred cceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEE
Confidence 568899999999888542 232344433344432 221 1234677888 788877665543 578999
Q ss_pred EeCCCCeEEEeec
Q psy13945 67 WHTNDGSLKCNIQ 79 (86)
Q Consensus 67 ~~~~~~~~~~~~~ 79 (86)
||+.+++.+..+.
T Consensus 98 ~d~~tg~~~~~~~ 110 (343)
T 2qe8_A 98 WDTLNNQLSRVIY 110 (343)
T ss_dssp EETTTTEEEEEEE
T ss_pred EECCCCeEEEEEE
Confidence 9999888666554
No 218
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.42 E-value=0.003 Score=32.92 Aligned_cols=72 Identities=8% Similarity=0.046 Sum_probs=51.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEE-EeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLAS-WKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
+.++++.+++++.++...++.+..+|. +++.... .......+..+. .+++..+++...++.+..++. +++..
T Consensus 101 ~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 101 PYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred ceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 467889999998888777889999987 5544322 222345577888 888888887777788999988 55443
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.38 E-value=0.004 Score=33.49 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=49.8
Q ss_pred eEEEECCCCCEEE-EEeCCCeEEEEEcc--CC-ce-----EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 3 RCIAVSSSGSWIA-IGQASGVLTLLDLR--TG-TS-----LASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~v~~~~~~--~~-~~-----~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
..++|++|++.++ +....+.|.+|+.. ++ +. ...+.........+. .+++..+++...++.|..|+. ++
T Consensus 182 ~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g 260 (326)
T 2ghs_A 182 NSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DG 260 (326)
T ss_dssp EEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TC
T ss_pred CCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CC
Confidence 5789999998654 44556889999975 45 32 112222233455677 778887777767788999997 55
Q ss_pred eEEEeec
Q psy13945 73 SLKCNIQ 79 (86)
Q Consensus 73 ~~~~~~~ 79 (86)
+.+..+.
T Consensus 261 ~~~~~i~ 267 (326)
T 2ghs_A 261 NHIARYE 267 (326)
T ss_dssp CEEEEEE
T ss_pred CEEEEEE
Confidence 5555554
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.34 E-value=0.0044 Score=32.92 Aligned_cols=67 Identities=7% Similarity=-0.122 Sum_probs=49.3
Q ss_pred eeEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
..+..|+++++ ++++....+.+..|+. +++ ...+......+..+. .+++.++++...++.|..|+..
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 35788999988 6677777889999986 444 334444455677888 8899877776667788888875
No 221
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.32 E-value=0.0042 Score=32.37 Aligned_cols=69 Identities=13% Similarity=0.248 Sum_probs=50.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe--CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK--GHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
+.++++.+++.+.++...++.+..|+.. ++. ..+. .....+..+. .+++..+++...++.+..|+. ++.
T Consensus 59 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 59 VMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred eeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 5678899999988887777889999865 332 2222 2344677888 788888888777888999987 443
No 222
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.20 E-value=0.0068 Score=32.32 Aligned_cols=75 Identities=12% Similarity=0.161 Sum_probs=53.3
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEE--EEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQ--LVTADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
..+.|+ ++.++.+.+.++.|+++|..+++....... ...+. +.......+.....++.+.++|..+.+.+.++..
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~--~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERL--GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEEC--TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECC--CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 467776 467888888889999999999998776622 22222 3322345555666788999999999988887753
No 223
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.12 E-value=0.00059 Score=37.44 Aligned_cols=71 Identities=15% Similarity=0.098 Sum_probs=43.0
Q ss_pred ECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCC---CeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 7 VSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADD---GTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 7 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
++|++..++.++.++.+..||..+++..-.+.... ..... ..+. ..++.++.++.+..||.++++.+..+.
T Consensus 126 ~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 126 LSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp -------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred ccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 44567778888888999999988887643332111 01111 2211 456678889999999999998877664
No 224
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.10 E-value=0.011 Score=33.01 Aligned_cols=67 Identities=15% Similarity=0.235 Sum_probs=47.3
Q ss_pred eeEEEECCCCCEEEEEe-CCCeEEEEEccCCceEEEEeCC---------------ccceEEEE-eCCCCeEEEEeCCCCE
Q psy13945 2 IRCIAVSSSGSWIAIGQ-ASGVLTLLDLRTGTSLASWKGH---------------EGEILQLV-TADDGTLISSSLDQTI 64 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~---------------~~~v~~~~-~~~~~~~~~~~~~~~i 64 (86)
...++++++|+++++-. ..+.|+.|+..++... .+.++ -.....+. .+++.++++-..++.|
T Consensus 325 P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~I 403 (409)
T 3hrp_A 325 PNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAI 403 (409)
T ss_dssp EEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEE
T ss_pred CeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeE
Confidence 45789999999888877 7899999997766643 22222 12356677 7777777777777777
Q ss_pred EEEeC
Q psy13945 65 SAWHT 69 (86)
Q Consensus 65 ~~~~~ 69 (86)
+.+.+
T Consensus 404 r~i~~ 408 (409)
T 3hrp_A 404 RKYAV 408 (409)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76654
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.08 E-value=0.009 Score=33.15 Aligned_cols=66 Identities=11% Similarity=-0.125 Sum_probs=49.2
Q ss_pred CEEEEEeCCC----eEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEe----------CCCCEEEEeCCCCeEEE
Q psy13945 12 SWIAIGQASG----VLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSS----------LDQTISAWHTNDGSLKC 76 (86)
Q Consensus 12 ~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~ 76 (86)
+.+++...+. .+.++|..+++.+.++.....+ .+. +|++..++.+. .++.|.+||..+++.+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 3444444444 8889999999998887654445 577 89988777665 36789999999998888
Q ss_pred eec
Q psy13945 77 NIQ 79 (86)
Q Consensus 77 ~~~ 79 (86)
.+.
T Consensus 111 ~I~ 113 (368)
T 1mda_H 111 DIE 113 (368)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.07 E-value=0.014 Score=33.54 Aligned_cols=75 Identities=15% Similarity=0.236 Sum_probs=54.7
Q ss_pred EEEECCCCCEEEEEeCC------CeEEEEEccCCceEEEEeCCcc---ceEEEE-eCCCCeEEEEe--------------
Q psy13945 4 CIAVSSSGSWIAIGQAS------GVLTLLDLRTGTSLASWKGHEG---EILQLV-TADDGTLISSS-------------- 59 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~~~~~~~---~v~~~~-~~~~~~~~~~~-------------- 59 (86)
.+...|+| .+++...+ +.+.++|..+.+++.++..... .-+.+- +|++..+++..
T Consensus 142 ~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~ 220 (462)
T 2ece_A 142 TVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLE 220 (462)
T ss_dssp EEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTT
T ss_pred ceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchh
Confidence 45678999 66655544 6899999999999888863322 223355 78888888874
Q ss_pred -----CCCCEEEEeCCCCeEEEeec
Q psy13945 60 -----LDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 60 -----~~~~i~~~~~~~~~~~~~~~ 79 (86)
...+|.+||+.+++.++++.
T Consensus 221 ~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 221 HLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp THHHHSCCEEEEEETTTTEEEEEEE
T ss_pred hhhhccCCEEEEEECCCCcEeeEEe
Confidence 36899999999887766654
No 227
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.97 E-value=0.011 Score=30.76 Aligned_cols=71 Identities=13% Similarity=0.189 Sum_probs=50.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEE-EEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLA-SWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
+.++++.+++++.++....+.|..+|.. ++... ........+..+. .+++..+++...++.+..++.. ++.
T Consensus 64 ~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 64 VMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred ceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 4678889999988877767889999876 55432 1122335677888 7888888877777888888876 443
No 228
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.85 E-value=0.015 Score=30.55 Aligned_cols=78 Identities=10% Similarity=-0.016 Sum_probs=52.3
Q ss_pred eeEEEECCCCCEEEEEeCC--CeEEEEEccCCceEEEEeCCccc-eEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 2 IRCIAVSSSGSWIAIGQAS--GVLTLLDLRTGTSLASWKGHEGE-ILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
...+.|+. +.++.+.+.. ..|+.+|..+++......-.... --.+....+..+.....++.+.++|..+.+.+.++
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 34677775 6777776665 48999999999998776543221 11222123444555667888999999998888777
Q ss_pred cC
Q psy13945 79 QG 80 (86)
Q Consensus 79 ~~ 80 (86)
..
T Consensus 102 ~~ 103 (243)
T 3mbr_X 102 RY 103 (243)
T ss_dssp EC
T ss_pred eC
Confidence 53
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.79 E-value=0.019 Score=30.60 Aligned_cols=72 Identities=14% Similarity=0.105 Sum_probs=50.6
Q ss_pred ECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCc--c---ceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 7 VSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHE--G---EILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 7 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~---~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+++|+..++.+..++.+.++|..+.+....+.... . ....+. . ++..++....+..|.+-|..+++.+..+.
T Consensus 112 lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 112 LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 45567666666678899999998888776665321 1 234555 4 66666666678899999999998877664
No 230
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.75 E-value=0.023 Score=33.24 Aligned_cols=60 Identities=20% Similarity=0.165 Sum_probs=39.8
Q ss_pred CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 20 SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 20 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
.+.+..+|..+++..-...... .+.... ...+..++.++.++.+..+|.++++.+..+..
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 4788888988887754443211 111111 22345566688999999999999999987763
No 231
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.75 E-value=0.02 Score=30.34 Aligned_cols=69 Identities=9% Similarity=0.027 Sum_probs=49.3
Q ss_pred eEEEECCC-CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 3 RCIAVSSS-GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 3 ~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
.+..|+++ +.++++....+.|..||..+++. ..+. ....+.++. .+++.++++. +..|..||..+++..
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAV 86 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEE
Confidence 46788885 45666777788999999877654 2232 345678888 8998866554 567889998877543
No 232
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.68 E-value=0.039 Score=32.86 Aligned_cols=72 Identities=15% Similarity=0.194 Sum_probs=43.3
Q ss_pred eeEEEECCCCCEEEEEeC----CCeEEEEEccCCc-eEEEEeCCccceEEEE-eCCCCeEEEEeCC---CCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQA----SGVLTLLDLRTGT-SLASWKGHEGEILQLV-TADDGTLISSSLD---QTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~-~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~---~~i~~~~~~~~ 72 (86)
...+.++|||++++.... ...++++|+.++. ....+..+........ +..+.+++....+ ..|..+++.++
T Consensus 236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANP 315 (693)
T ss_dssp EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 356889999998754332 2488999987653 3444444444444433 3344444454443 56888888765
Q ss_pred e
Q psy13945 73 S 73 (86)
Q Consensus 73 ~ 73 (86)
.
T Consensus 316 ~ 316 (693)
T 3iuj_A 316 G 316 (693)
T ss_dssp C
T ss_pred C
Confidence 4
No 233
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.67 E-value=0.027 Score=33.09 Aligned_cols=60 Identities=17% Similarity=0.241 Sum_probs=39.7
Q ss_pred CCeEEEEEccCCceEEEEeCCccceEE-EEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 20 SGVLTLLDLRTGTSLASWKGHEGEILQ-LVTADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 20 ~~~v~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
.+.|..||..+++..=...... .... ...-.+..++.++.|+.++.+|.++|+.+..++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 5778888988887653332211 1111 1111345666688999999999999999988764
No 234
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.63 E-value=0.027 Score=30.32 Aligned_cols=69 Identities=19% Similarity=0.088 Sum_probs=48.2
Q ss_pred eEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 3 RCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 3 ~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
.+..|++++ .++++....+.|..||..+++.. .+. ....+.++. .+++..++.. ...|.+||..+++..
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVLT 122 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCEE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcEE
Confidence 467899874 56667777889999998776543 232 235678888 8888877654 334888998776543
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.59 E-value=0.016 Score=34.34 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=47.4
Q ss_pred eEEEECCCCCEEEE-EeCCCeEEEEEccCCc------------eEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEe
Q psy13945 3 RCIAVSSSGSWIAI-GQASGVLTLLDLRTGT------------SLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWH 68 (86)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~------------~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~ 68 (86)
.++.++|||++++. +....++.++|..+.+ ....... ...-..+. ++++..+++.-.++++..|+
T Consensus 280 hGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 280 HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred eEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence 57899999997654 5567889999988553 2222222 22335666 78885556777899999999
Q ss_pred CCC
Q psy13945 69 TND 71 (86)
Q Consensus 69 ~~~ 71 (86)
+..
T Consensus 359 i~~ 361 (595)
T 1fwx_A 359 IED 361 (595)
T ss_dssp HHH
T ss_pred hhH
Confidence 865
No 236
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.57 E-value=0.025 Score=29.40 Aligned_cols=68 Identities=7% Similarity=-0.003 Sum_probs=49.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEE-EeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLAS-WKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
+.++++.+++++.++....+.+..++. .++.... .......+..+. .+++..+++...++.|..++..
T Consensus 190 ~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 190 PVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred cceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 467888999988887777778999987 4443322 222345567888 8888877777777889999873
No 237
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.45 E-value=0.034 Score=29.50 Aligned_cols=69 Identities=19% Similarity=0.094 Sum_probs=44.0
Q ss_pred eeEEEECCCCCEEEE----EeC-------------CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCC--
Q psy13945 2 IRCIAVSSSGSWIAI----GQA-------------SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLD-- 61 (86)
Q Consensus 2 i~~~~~~~~~~~~~~----~~~-------------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~-- 61 (86)
+..+++.++|++.++ |.. .+.|..+|..+++..... .......+. +|++..++.+...
T Consensus 133 ~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~ 210 (305)
T 3dr2_A 133 PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQ 210 (305)
T ss_dssp CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC-
T ss_pred CCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCc
Confidence 346889999998876 221 245667776556543322 233446677 8998876655544
Q ss_pred ----CCEEEEeCCCC
Q psy13945 62 ----QTISAWHTNDG 72 (86)
Q Consensus 62 ----~~i~~~~~~~~ 72 (86)
+.|..|++..+
T Consensus 211 ~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 211 GHGSVEITAFAWRDG 225 (305)
T ss_dssp --CCCEEEEEEEETT
T ss_pred CCCCCEEEEEEecCC
Confidence 67888887654
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.39 E-value=0.037 Score=29.15 Aligned_cols=72 Identities=19% Similarity=0.180 Sum_probs=49.8
Q ss_pred CCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC--cc---ceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 8 SSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH--EG---EILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 8 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~---~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.+|+..++.+..+..|.++|..+.+...++... .. .+.-+...++..++....+..|.+-|.++++.+..+.
T Consensus 111 t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 111 TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEE
Confidence 345666666667889999999888887666542 22 2233333366666666678899999999999887764
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.25 E-value=0.049 Score=29.15 Aligned_cols=71 Identities=10% Similarity=-0.004 Sum_probs=49.9
Q ss_pred CCCCEEEEEeCCCeEEEEEccCCceEEEEeCC--ccc---eEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 9 SSGSWIAIGQASGVLTLLDLRTGTSLASWKGH--EGE---ILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 9 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~---v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+|+..++.++.+..+.++|..+.+...++... ... +..+...++..++....+..|.+-|..+++.+..+.
T Consensus 143 ~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 143 YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 46677777777889999998888887666532 222 233443367666666678899999999998887664
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.18 E-value=0.058 Score=29.37 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=43.4
Q ss_pred CCEEEEEeCCCeEEEEEccCCceEEEEeCC-ccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGTSLASWKGH-EGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+..++.+..++.+..+|..+++..-..... ........ ..+..++.+..++.+.++|..+++.+.....
T Consensus 277 ~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~-~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 277 GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPV-LYNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCE-EETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCE-EECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 445666666778888888777765443311 11111111 1245677778889999999999988776643
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.18 E-value=0.053 Score=28.89 Aligned_cols=72 Identities=15% Similarity=0.185 Sum_probs=49.7
Q ss_pred CCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC--ccc---eEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 8 SSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH--EGE---ILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 8 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~---v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
++|+..++.++....+.++|..+.+....+... ..+ +..+...++..++....+..|.+.|..+++.+..+.
T Consensus 133 t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 133 THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEE
T ss_pred ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEE
Confidence 346666666666788999998888877665542 222 233443366666666678899999999999887764
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.14 E-value=0.06 Score=32.13 Aligned_cols=60 Identities=10% Similarity=0.054 Sum_probs=41.5
Q ss_pred CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 20 SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 20 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
++.|..||..+++..=...... ...... ...+..++.++.++.++.||.++++.+..+..
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecC
Confidence 3789999999988754433221 111112 33466677788999999999999999887754
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.92 E-value=0.13 Score=30.95 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=51.7
Q ss_pred EEEECCCCCEEEEEeCCCe-------------------EEEEEccCCceEEEEeC--Cc-------cceEEEE-eCCCC-
Q psy13945 4 CIAVSSSGSWIAIGQASGV-------------------LTLLDLRTGTSLASWKG--HE-------GEILQLV-TADDG- 53 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~-------------------v~~~~~~~~~~~~~~~~--~~-------~~v~~~~-~~~~~- 53 (86)
.+++.+++.+++.+..++. |..+|..+++..=.+.. +. ....... ..++.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 4567788888888877653 99999999988655543 21 1112222 23443
Q ss_pred --eEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 54 --TLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 54 --~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
.++.+..++.+.++|.++|+.+...
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAK 345 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccc
Confidence 5778889999999999999887543
No 244
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.52 E-value=0.18 Score=29.93 Aligned_cols=60 Identities=13% Similarity=0.110 Sum_probs=37.8
Q ss_pred CCeEEEEEccCCceEEEEeCCccceE-EEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 20 SGVLTLLDLRTGTSLASWKGHEGEIL-QLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 20 ~~~v~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
.+.+..||..+++..=..... .+.. ....-.+..++.++.|+.++.+|.++|+.+..++-
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l 512 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI 512 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeC
Confidence 367788888777764332211 1111 10111355566688999999999999999988753
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.41 E-value=0.12 Score=27.32 Aligned_cols=69 Identities=23% Similarity=0.266 Sum_probs=41.4
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+...+++. +..+..++.+..+|.. ++...........+.++. ..++..++.. +.+..+| .+++.+..+.
T Consensus 142 ~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~ 211 (330)
T 3hxj_A 142 PIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFY 211 (330)
T ss_dssp CEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEEC
T ss_pred eEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEc
Confidence 34445555 4446667888888877 666555444344444555 4566655444 7788888 6666555543
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.29 E-value=0.15 Score=27.73 Aligned_cols=70 Identities=17% Similarity=0.186 Sum_probs=46.4
Q ss_pred CCEEEEEeCCCeEEEEEccCCceEEEEeCC---------ccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeEEEeecC
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGTSLASWKGH---------EGEILQLVTADDGTLISSSLDQTISAWHTNDGSLKCNIQG 80 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (86)
+..++.++.++.+..+|..+++..-..... ...+......++..++.++.++.+..+|..+++.+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 456677777889999999888875433321 1222222222455666777889999999999988766543
No 247
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.20 E-value=0.25 Score=29.64 Aligned_cols=76 Identities=9% Similarity=0.159 Sum_probs=52.1
Q ss_pred EEEECCCCCEEEEEeCCC-------------------eEEEEEccCCceEEEEeC--Cc-------cceEEEE-eCCC--
Q psy13945 4 CIAVSSSGSWIAIGQASG-------------------VLTLLDLRTGTSLASWKG--HE-------GEILQLV-TADD-- 52 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~-------------------~v~~~~~~~~~~~~~~~~--~~-------~~v~~~~-~~~~-- 52 (86)
.+++++++.+++.+..++ .|..+|..+++..=.+.. +. .....+. ..++
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~ 326 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP 326 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE
Confidence 356778888887776554 488999999987655442 21 1112222 3355
Q ss_pred -CeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 53 -GTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 53 -~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
..++.+..++.+.++|.++|+.+..+.
T Consensus 327 ~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 327 RKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEECCCCEEEEEECCCCCEecccc
Confidence 567888899999999999999887654
No 248
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.06 E-value=0.29 Score=29.66 Aligned_cols=69 Identities=12% Similarity=-0.022 Sum_probs=42.5
Q ss_pred EEEECCCCCEEEEEeCC-----CeEEEEEccCCce--EEEEeC-CccceEEEE-eCCCCeEEEEe---CCCCEEEEeCCC
Q psy13945 4 CIAVSSSGSWIAIGQAS-----GVLTLLDLRTGTS--LASWKG-HEGEILQLV-TADDGTLISSS---LDQTISAWHTND 71 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~--~~~~~~-~~~~v~~~~-~~~~~~~~~~~---~~~~i~~~~~~~ 71 (86)
.+.|+||++.|+....+ ..|+.+++.++.. ...+.. .......+. +|++..++... ....+.++|+.+
T Consensus 225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 56899999876655543 3577778766542 223322 223445667 89998776443 234577778765
Q ss_pred C
Q psy13945 72 G 72 (86)
Q Consensus 72 ~ 72 (86)
+
T Consensus 305 ~ 305 (751)
T 2xe4_A 305 G 305 (751)
T ss_dssp C
T ss_pred C
Confidence 4
No 249
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.97 E-value=0.23 Score=28.07 Aligned_cols=68 Identities=10% Similarity=0.045 Sum_probs=46.0
Q ss_pred eEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeC-CccceEEEE-eCCCC-eEEEEeCCCCEEEEeCC
Q psy13945 3 RCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKG-HEGEILQLV-TADDG-TLISSSLDQTISAWHTN 70 (86)
Q Consensus 3 ~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~ 70 (86)
..++++| ++.++++-...+.|..++...+........ ....-..+. +|++. ++++-...+.|..++..
T Consensus 229 ~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 229 NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 4577888 777777777778899999776554222221 223345777 89988 55666677888887754
No 250
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.85 E-value=0.14 Score=32.00 Aligned_cols=37 Identities=16% Similarity=0.236 Sum_probs=30.8
Q ss_pred ceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 43 EILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 43 ~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.+.++. .++...+++-+.|+++++|++.++.++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 355666 6788889999999999999999999988753
No 251
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.76 E-value=0.062 Score=32.44 Aligned_cols=68 Identities=12% Similarity=0.108 Sum_probs=39.8
Q ss_pred eeEEEEC-CCCCEEEEEeC-C----CeEEEEEccCC-ceEE-EEeCCccceEEEE-eCCCCeEEEEeCC-----CCEEEE
Q psy13945 2 IRCIAVS-SSGSWIAIGQA-S----GVLTLLDLRTG-TSLA-SWKGHEGEILQLV-TADDGTLISSSLD-----QTISAW 67 (86)
Q Consensus 2 i~~~~~~-~~~~~~~~~~~-~----~~v~~~~~~~~-~~~~-~~~~~~~~v~~~~-~~~~~~~~~~~~~-----~~i~~~ 67 (86)
+....|| |||++++.+.. . ..|+++|+.++ +.+. .+. .....+. +|++..++-...+ ..|..+
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 4568899 99997774332 2 35999999887 5321 111 1122455 6787766544433 246666
Q ss_pred eCCCC
Q psy13945 68 HTNDG 72 (86)
Q Consensus 68 ~~~~~ 72 (86)
++.++
T Consensus 253 ~lgt~ 257 (751)
T 2xe4_A 253 VMGKL 257 (751)
T ss_dssp ETTSC
T ss_pred ECCCC
Confidence 76554
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.62 E-value=0.23 Score=26.42 Aligned_cols=71 Identities=13% Similarity=0.216 Sum_probs=46.2
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCC--CEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQ--TISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~--~i~~~~~~~~~~ 74 (86)
...++++++++++++....+.|..+|... .....+. .......+. .+++.++++..... .+..++..+++.
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 35789999999877776788999888654 3333222 234567777 78888766654433 365666666653
No 253
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.55 E-value=0.19 Score=31.52 Aligned_cols=36 Identities=19% Similarity=0.160 Sum_probs=29.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW 37 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 37 (86)
+.+++..++..++++-+.|+++++|++.+++++...
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 455666778889999999999999999998876543
No 254
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.45 E-value=0.36 Score=27.89 Aligned_cols=69 Identities=14% Similarity=0.238 Sum_probs=49.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCce------------EEEEeC------CccceEEEE-eC---CCCeEEEEe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS------------LASWKG------HEGEILQLV-TA---DDGTLISSS 59 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------------~~~~~~------~~~~v~~~~-~~---~~~~~~~~~ 59 (86)
|..+..+|+|.+++..+ +..+.|..+..+.. ...+.- ...+|..+. +| .+..++.-.
T Consensus 68 i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt 146 (452)
T 3pbp_A 68 TFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK 146 (452)
T ss_dssp TCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred eeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence 45788999999988775 56888888773210 112221 135688888 77 466899999
Q ss_pred CCCCEEEEeCCC
Q psy13945 60 LDQTISAWHTND 71 (86)
Q Consensus 60 ~~~~i~~~~~~~ 71 (86)
.|+.|++||+..
T Consensus 147 sD~~Ir~yDl~~ 158 (452)
T 3pbp_A 147 EDDTITMFDILN 158 (452)
T ss_dssp TTSCEEEEETTC
T ss_pred cCCEEEEEEccc
Confidence 999999999975
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.10 E-value=0.29 Score=25.39 Aligned_cols=75 Identities=5% Similarity=-0.071 Sum_probs=47.9
Q ss_pred eEEEECCCCCE-EEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 3 RCIAVSSSGSW-IAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 3 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
..+++++++.. +++....+.|.+++............. ..-..+. . ++..+++...++.|..++..+++.+..+.
T Consensus 170 ~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 170 NGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred cEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 57888887654 455555678999987644332222222 2224455 4 45555666677899999998888777764
No 256
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.01 E-value=0.53 Score=28.05 Aligned_cols=73 Identities=12% Similarity=0.095 Sum_probs=44.8
Q ss_pred EEEECC-CCCEEEEEeCCC-----------eEEEEEccCCceE--EEEeC-CccceEEEE-eCCCCeEEEEeC-CCCEEE
Q psy13945 4 CIAVSS-SGSWIAIGQASG-----------VLTLLDLRTGTSL--ASWKG-HEGEILQLV-TADDGTLISSSL-DQTISA 66 (86)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~-----------~v~~~~~~~~~~~--~~~~~-~~~~v~~~~-~~~~~~~~~~~~-~~~i~~ 66 (86)
..++.+ ++++++.|+.+. .+.+||..+.+.. ..+.. +........ ..++.+++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 445566 788888776432 5788887765532 22211 222223344 578888888874 458999
Q ss_pred EeCCCCeEEE
Q psy13945 67 WHTNDGSLKC 76 (86)
Q Consensus 67 ~~~~~~~~~~ 76 (86)
||..+.....
T Consensus 270 yd~~t~~W~~ 279 (656)
T 1k3i_A 270 YDSSSDSWIP 279 (656)
T ss_dssp EEGGGTEEEE
T ss_pred ecCcCCceeE
Confidence 9987765443
No 257
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.82 E-value=0.13 Score=30.72 Aligned_cols=71 Identities=10% Similarity=-0.034 Sum_probs=47.8
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccC----------CceEEEEeCCccce--E---EEE-eCCCCeEEEEeC---CCC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRT----------GTSLASWKGHEGEI--L---QLV-TADDGTLISSSL---DQT 63 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~~~~~~~~~~~~v--~---~~~-~~~~~~~~~~~~---~~~ 63 (86)
..++|+++|...++...+..+.+||+.. .+.+.++..+.++- . .+. .+++.++++... |+.
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccc
Confidence 5789999996666778899999999876 45566666554322 1 123 578999887653 333
Q ss_pred E----------EEEeCCCCe
Q psy13945 64 I----------SAWHTNDGS 73 (86)
Q Consensus 64 i----------~~~~~~~~~ 73 (86)
+ .++|+..++
T Consensus 414 ~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSS
T ss_pred ccCCCCCCCcceEEEcCCCc
Confidence 1 678886554
No 258
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=93.76 E-value=0.35 Score=25.10 Aligned_cols=69 Identities=9% Similarity=-0.030 Sum_probs=43.2
Q ss_pred eEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCCC
Q psy13945 3 RCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 3 ~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~~ 71 (86)
.++++++++. ++++....+.|..++...................+. .++ +..+++-...+.|.+++...
T Consensus 39 ~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 5788888654 455555567899999765443322222223456777 775 44555666677888888753
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.68 E-value=0.64 Score=27.92 Aligned_cols=74 Identities=14% Similarity=0.172 Sum_probs=49.9
Q ss_pred EEECCCCCEEEEEeCCC-------------------eEEEEEccCCceEEEEeC--Cc-------cceEEEE-eCCCC--
Q psy13945 5 IAVSSSGSWIAIGQASG-------------------VLTLLDLRTGTSLASWKG--HE-------GEILQLV-TADDG-- 53 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~-------------------~v~~~~~~~~~~~~~~~~--~~-------~~v~~~~-~~~~~-- 53 (86)
+++.+++.+++.+..++ .|..+|..+++..=.+.. +. .+..... ..++.
T Consensus 235 ~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~ 314 (668)
T 1kv9_A 235 MAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPR 314 (668)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEE
T ss_pred eEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEE
Confidence 56777777877776665 388999999987655442 21 1222222 23443
Q ss_pred -eEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 54 -TLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 54 -~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
.++.+..++.+.++|..+|+.+...
T Consensus 315 ~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 315 KVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCCEeccc
Confidence 5778889999999999999887543
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.59 E-value=0.62 Score=27.47 Aligned_cols=69 Identities=22% Similarity=0.183 Sum_probs=43.8
Q ss_pred CCEEEEEeCCCeEEEEEccCCceEEEEeCCcc-ceEEEE-eC--CCCeEEEEeC------CCCEEEEeCCCCeEEEeec
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGTSLASWKGHEG-EILQLV-TA--DDGTLISSSL------DQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~v~~~~-~~--~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~ 79 (86)
+..++.+..++.+..+|..+++..=....... .-..+. .| .+..++.+.. ++.+..+|.++|+.+..+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 45677778899999999999987644332110 000111 22 2334444433 7899999999999887765
No 261
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=93.32 E-value=0.16 Score=32.28 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=28.7
Q ss_pred EEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 45 LQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 45 ~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.++. .++...+++-+.|+++++|++.++.++.+..
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3444 5677788899999999999999999988753
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.11 E-value=0.8 Score=27.32 Aligned_cols=73 Identities=8% Similarity=0.091 Sum_probs=46.2
Q ss_pred EEEECCCCCEEEEEeC-CCeEEEEEccCCceEEEEeCCccce-EEEE-eCCCCeEEEEe-CC-----CCEEEEeCCCCeE
Q psy13945 4 CIAVSSSGSWIAIGQA-SGVLTLLDLRTGTSLASWKGHEGEI-LQLV-TADDGTLISSS-LD-----QTISAWHTNDGSL 74 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~v-~~~~-~~~~~~~~~~~-~~-----~~i~~~~~~~~~~ 74 (86)
+.++..++++++.|+. +..+.+||..+.+-...-.-...+. .+.. .+++.+++.|+ .+ ..+.+||..+...
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 3566788999888874 4579999987654322211111111 2233 45888888887 34 5689999987765
Q ss_pred EE
Q psy13945 75 KC 76 (86)
Q Consensus 75 ~~ 76 (86)
..
T Consensus 327 ~~ 328 (656)
T 1k3i_A 327 TS 328 (656)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 263
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=92.95 E-value=0.77 Score=26.70 Aligned_cols=70 Identities=10% Similarity=0.028 Sum_probs=45.8
Q ss_pred CCCCEE-EEEeCCCeEEEEEccCC----ceEEEEe------C-CccceEEEE-eCCCCeEEEEeCC------CCEEEEeC
Q psy13945 9 SSGSWI-AIGQASGVLTLLDLRTG----TSLASWK------G-HEGEILQLV-TADDGTLISSSLD------QTISAWHT 69 (86)
Q Consensus 9 ~~~~~~-~~~~~~~~v~~~~~~~~----~~~~~~~------~-~~~~v~~~~-~~~~~~~~~~~~~------~~i~~~~~ 69 (86)
.+++++ +.+-.+..|.++|..+. +...... . ....-..+. .|++ ++++...+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 667654 45666788999998643 3344442 0 111223445 6888 77766555 68999999
Q ss_pred CCCeEEEeec
Q psy13945 70 NDGSLKCNIQ 79 (86)
Q Consensus 70 ~~~~~~~~~~ 79 (86)
.+.+.+..+.
T Consensus 172 ~T~~v~~~~~ 181 (462)
T 2ece_A 172 YSFEPLGKWE 181 (462)
T ss_dssp TTCCEEEECC
T ss_pred CCCeEEEEEc
Confidence 9988888775
No 264
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=92.84 E-value=0.21 Score=31.82 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=26.1
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEE
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLAS 36 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 36 (86)
++..++..++++-+.|+++++|++.++.++.+
T Consensus 243 ~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 243 MIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 34456778899999999999999998877554
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=92.53 E-value=0.82 Score=25.98 Aligned_cols=67 Identities=18% Similarity=0.115 Sum_probs=44.0
Q ss_pred EEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEE-eC-CccceEEEE-eCCCC-eEEEEeCCCCEEEEeCC
Q psy13945 4 CIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASW-KG-HEGEILQLV-TADDG-TLISSSLDQTISAWHTN 70 (86)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~-~~~~v~~~~-~~~~~-~~~~~~~~~~i~~~~~~ 70 (86)
.+++++ ++.+.++-...+.|+.++..++.....+ .. ....-..+. +|++. ++++-...+.|..+++.
T Consensus 232 giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 232 TCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 467788 6777777667788988887766652222 21 122234577 88887 55666677889887754
No 266
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=92.26 E-value=1 Score=26.41 Aligned_cols=67 Identities=12% Similarity=0.105 Sum_probs=44.4
Q ss_pred eEEEECC-CCCEEEEEeCCCeEEEEEcc-------CCce-----------EEE-Ee-CCccceEEEE-eCCCC-eEEEEe
Q psy13945 3 RCIAVSS-SGSWIAIGQASGVLTLLDLR-------TGTS-----------LAS-WK-GHEGEILQLV-TADDG-TLISSS 59 (86)
Q Consensus 3 ~~~~~~~-~~~~~~~~~~~~~v~~~~~~-------~~~~-----------~~~-~~-~~~~~v~~~~-~~~~~-~~~~~~ 59 (86)
..++++| ++.++++-...+.|..+|.. ++.. ... +. .....-+.++ +|++. ++++-.
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~ 329 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI 329 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC
Confidence 3567888 56777777788889999987 4443 112 22 2223446788 89988 456667
Q ss_pred CCCCEEEEeC
Q psy13945 60 LDQTISAWHT 69 (86)
Q Consensus 60 ~~~~i~~~~~ 69 (86)
..+.|+.++.
T Consensus 330 ~~h~I~kid~ 339 (496)
T 3kya_A 330 NNHYFMRSDY 339 (496)
T ss_dssp TTTEEEEEEE
T ss_pred CCCEEEEEec
Confidence 7788888554
No 267
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.89 E-value=0.77 Score=24.27 Aligned_cols=66 Identities=17% Similarity=0.212 Sum_probs=41.6
Q ss_pred CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 11 GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 11 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+..+..+..++.+..+|.. ++..-........+.++. .+++. +..+..++.+..+|.. ++.+..+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~ 173 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFK 173 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEe
Confidence 3445667778888888877 665544444334444444 44555 4456677889999987 76665543
No 268
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.47 E-value=1.1 Score=25.23 Aligned_cols=66 Identities=15% Similarity=0.161 Sum_probs=47.8
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
+..++.-..++.-...|.+.+||+.++.++..-+.....|..-+ ..+...++.-..+|.+.--.+.
T Consensus 265 mqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 265 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred EEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 44455556677778899999999999999888777777776555 5566677777777776554443
No 269
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=90.93 E-value=1.5 Score=27.10 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=26.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW 37 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 37 (86)
|.++.+ +..++++-+.|+++++|++.+++.+...
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 344444 4678999999999999999998876544
No 270
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=89.71 E-value=0.91 Score=27.98 Aligned_cols=30 Identities=13% Similarity=0.189 Sum_probs=25.8
Q ss_pred CCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 50 ADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 50 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.+...+++-+.|+++++|++.++.++.+..
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 346788999999999999999999887654
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=89.69 E-value=1.4 Score=23.42 Aligned_cols=69 Identities=12% Similarity=0.117 Sum_probs=45.5
Q ss_pred eeEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeCC-ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKGH-EGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
+..++++|++. ++++...++.|...|.. ++.+..+.-. ..-.-.+. .+++.++++.-.++.+.++++..
T Consensus 29 lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp EEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred cceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 57899998754 56668888899999987 7777665321 12233455 56666656655667777776643
No 272
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=88.29 E-value=1.8 Score=22.92 Aligned_cols=63 Identities=8% Similarity=0.015 Sum_probs=37.8
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCce------EEEEe--CCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTS------LASWK--GHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~~~--~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
+..++|+|+|.+.+. .++.++-.+..+... ...+- +-+. ..++. .+++.+.++ .|+.|.-++.
T Consensus 43 ~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 457999999997666 677777666543111 11111 1111 24555 688888777 5588876664
No 273
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.14 E-value=2.7 Score=24.77 Aligned_cols=67 Identities=15% Similarity=0.161 Sum_probs=49.3
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 4 CIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
++..++.-..++.-...|.+.++|+.++..+..-+.....|..-. ..+...++....+|.+.--.+.
T Consensus 263 amqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred EEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 344555566777778899999999999999887777777776665 6666777777777776554443
No 274
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=87.74 E-value=2 Score=22.93 Aligned_cols=68 Identities=9% Similarity=0.065 Sum_probs=42.2
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeC--------------------CccceEEEE-eC-CCCeEEEEeC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKG--------------------HEGEILQLV-TA-DDGTLISSSL 60 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--------------------~~~~v~~~~-~~-~~~~~~~~~~ 60 (86)
.++++.++++++.++..++.|..|+...++.. .+.. .......+. .+ ++.++++ ..
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~-d~ 99 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV-DC 99 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE-ET
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE-EC
Confidence 45788888887777888889999987654432 2210 012456777 76 5555544 33
Q ss_pred CCCEEEEeCCCC
Q psy13945 61 DQTISAWHTNDG 72 (86)
Q Consensus 61 ~~~i~~~~~~~~ 72 (86)
.+.+..++..++
T Consensus 100 ~~~i~~~d~~~g 111 (322)
T 2fp8_A 100 YYHLSVVGSEGG 111 (322)
T ss_dssp TTEEEEECTTCE
T ss_pred CCCEEEEeCCCC
Confidence 344777776644
No 275
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=87.63 E-value=1.7 Score=25.27 Aligned_cols=30 Identities=17% Similarity=0.296 Sum_probs=25.0
Q ss_pred CeeEEEECCCC---CEEEEEeCCCeEEEEEccC
Q psy13945 1 LIRCIAVSSSG---SWIAIGQASGVLTLLDLRT 30 (86)
Q Consensus 1 ~i~~~~~~~~~---~~~~~~~~~~~v~~~~~~~ 30 (86)
+|..+.|+|-+ ..+++-..|.+|++||+..
T Consensus 126 ~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 126 SIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 47889999954 5788888899999999874
No 276
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=85.34 E-value=3.4 Score=23.08 Aligned_cols=69 Identities=9% Similarity=0.123 Sum_probs=47.1
Q ss_pred eeEEEECCCCCEEEEEeCC-CeEEEEEccCCceEEEEe-CC-----ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQAS-GVLTLLDLRTGTSLASWK-GH-----EGEILQLV-TADDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~-~~-----~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 71 (86)
...++..++|+..++++.. +.|..++.. ++....+. .. ......+. .|++..++.....+.+..+|+..
T Consensus 139 ~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 139 VVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 3578889999998888877 777776644 33333221 11 11245778 89998887776699999999764
No 277
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=85.14 E-value=3 Score=22.30 Aligned_cols=69 Identities=16% Similarity=0.115 Sum_probs=42.0
Q ss_pred eeEEEECC-CCCEEEEEeC-----------------CCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeE-EEEeCC
Q psy13945 2 IRCIAVSS-SGSWIAIGQA-----------------SGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTL-ISSSLD 61 (86)
Q Consensus 2 i~~~~~~~-~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~-~~~~~~ 61 (86)
...+++.+ +|++.++... .+.+..+|..+++....... ......+. ++++..+ ++-...
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~ 206 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLS 206 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGG
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCC
Confidence 35678888 8887666432 25677788665554322111 12224566 7887744 555667
Q ss_pred CCEEEEeCCC
Q psy13945 62 QTISAWHTND 71 (86)
Q Consensus 62 ~~i~~~~~~~ 71 (86)
+.|..+++..
T Consensus 207 ~~I~~~~~~~ 216 (322)
T 2fp8_A 207 HQIVKYWLEG 216 (322)
T ss_dssp TEEEEEESSS
T ss_pred CeEEEEECCC
Confidence 8888888763
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=84.24 E-value=3.5 Score=22.39 Aligned_cols=72 Identities=13% Similarity=0.001 Sum_probs=41.0
Q ss_pred eEEEECCCCCE-EEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEE
Q psy13945 3 RCIAVSSSGSW-IAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLK 75 (86)
Q Consensus 3 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 75 (86)
..+++++++.. .++-...+.|..+|................-..+. . .+..+.+-...+.|..++..+++..
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSC
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCce
Confidence 57888875554 44555567788888753222222222223334555 4 3455566666778888887666533
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=82.60 E-value=4.9 Score=22.85 Aligned_cols=71 Identities=7% Similarity=-0.034 Sum_probs=40.0
Q ss_pred eeEEEECCCCCEEEEEeC-C----CeEEEEEccCCceE--EEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQA-S----GVLTLLDLRTGTSL--ASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~--~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
...++++++++.++.+.. . ..+.+.+.. +... ..+.. ......+. .| ++.++++-..++.|..++...+
T Consensus 181 P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 181 VRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp EEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred cceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 357899999985554443 1 133444432 2221 22221 12234556 77 6777777777788888888765
Q ss_pred eE
Q psy13945 73 SL 74 (86)
Q Consensus 73 ~~ 74 (86)
..
T Consensus 259 ~~ 260 (430)
T 3tc9_A 259 ET 260 (430)
T ss_dssp EE
T ss_pred cE
Confidence 43
No 280
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=82.28 E-value=6.5 Score=24.04 Aligned_cols=76 Identities=11% Similarity=0.084 Sum_probs=43.7
Q ss_pred eEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeC--CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEee
Q psy13945 3 RCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKG--HEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNI 78 (86)
Q Consensus 3 ~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (86)
..+++++++ +++++-.....|..++............ ....-..+. .. ..++++....+.|..++..+++.+..+
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~-~~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET-TEEEEECSTTTCEEEEETTTEEEEECC
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC-CEEEEEeCCCCeEEEEEccCCCceEEe
Confidence 468888764 5555555667888888753222221111 111122333 33 355566667788999988777766665
Q ss_pred c
Q psy13945 79 Q 79 (86)
Q Consensus 79 ~ 79 (86)
.
T Consensus 622 ~ 622 (699)
T 1n7d_A 622 A 622 (699)
T ss_dssp C
T ss_pred e
Confidence 3
No 281
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=81.12 E-value=1 Score=25.04 Aligned_cols=62 Identities=8% Similarity=0.127 Sum_probs=40.0
Q ss_pred eCCCeEEEEEccCCceEEEEeCC----ccceEEEEe--C-------CCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 18 QASGVLTLLDLRTGTSLASWKGH----EGEILQLVT--A-------DDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 18 ~~~~~v~~~~~~~~~~~~~~~~~----~~~v~~~~~--~-------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
..+|.+..++..++...-.+... ..++..-.. - .+..++.++.++.+...|.++|+.+..+.
T Consensus 64 ~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 64 FGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp STTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred CCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 57899999988777543322211 111221000 1 45567789999999999999999988875
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=80.91 E-value=5.9 Score=22.61 Aligned_cols=72 Identities=13% Similarity=0.172 Sum_probs=34.7
Q ss_pred eeEEEECCCCCEEEEEeCC---Ce-EEEEEccCCce-EEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQAS---GV-LTLLDLRTGTS-LASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~---~~-v~~~~~~~~~~-~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
...++++++++++++.... .. +...+...... ...+. ....-..+. .+ ++.++++-..++.|..++..++..
T Consensus 184 P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 184 CADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 4678899999855544311 11 22222221111 01111 111123344 55 566666666667777777765543
No 283
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=80.24 E-value=7.5 Score=23.41 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=47.6
Q ss_pred EECCCCCEEEEEeCC----------------CeEEEEEccCCceEEEEeCCc----------cceEEEE-e-CCC---Ce
Q psy13945 6 AVSSSGSWIAIGQAS----------------GVLTLLDLRTGTSLASWKGHE----------GEILQLV-T-ADD---GT 54 (86)
Q Consensus 6 ~~~~~~~~~~~~~~~----------------~~v~~~~~~~~~~~~~~~~~~----------~~v~~~~-~-~~~---~~ 54 (86)
++.++..+++.+..+ ..+..+|..+++..=.++... .++. +. . .++ ..
T Consensus 247 a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~ 325 (599)
T 1w6s_A 247 AYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKL 325 (599)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEE
T ss_pred eEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEE
Confidence 344555666665544 378899999998764444321 1121 22 2 456 45
Q ss_pred EEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 55 LISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 55 ~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
++.+..++.+.++|.++|+.+....
T Consensus 326 v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 326 LTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCCcEEEEEECCCCCEeeccc
Confidence 6678899999999999999887654
No 284
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=80.11 E-value=7.3 Score=23.24 Aligned_cols=58 Identities=10% Similarity=0.090 Sum_probs=39.9
Q ss_pred CeEEEEEccCCceEEEEeC--Cc--------cceEEEE-e-CCCC---eEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 21 GVLTLLDLRTGTSLASWKG--HE--------GEILQLV-T-ADDG---TLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 21 ~~v~~~~~~~~~~~~~~~~--~~--------~~v~~~~-~-~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
+.|..+|..+++..=.++. +. .++. +. . .++. .++.++.++.+.++|.++|+.+..+.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 5789999999987644432 21 1222 12 2 4563 56788899999999999999887654
No 285
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=79.34 E-value=8.6 Score=23.59 Aligned_cols=71 Identities=14% Similarity=0.265 Sum_probs=43.7
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe----CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK----GHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
|.++...++++++-.|..++-+..+|..+++...-.. .....|.++. .+++.+.+... .-+..++..++..
T Consensus 408 v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSF 483 (795)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEE
T ss_pred EEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeE
Confidence 5566666777744556655668888877665432211 1235678887 66777655443 4577888776543
No 286
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=78.51 E-value=6.4 Score=21.66 Aligned_cols=66 Identities=14% Similarity=0.169 Sum_probs=38.5
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCce--EEEEe---CCccceEEEE-eCC----CCeEEEEeCC-----CCEEEE
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTS--LASWK---GHEGEILQLV-TAD----DGTLISSSLD-----QTISAW 67 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~---~~~~~v~~~~-~~~----~~~~~~~~~~-----~~i~~~ 67 (86)
..++|.|||+++++- ..+.|++++ .++. ...+. ........++ +|+ +..+++.... ..|..+
T Consensus 34 ~~ia~~pdG~l~V~e-~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 34 WALAFLPDGGMLIAE-RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp EEEEECTTSCEEEEE-TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred eEEEEcCCCeEEEEe-CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 578999999966654 568898887 3332 11111 1123456777 776 4444444432 456666
Q ss_pred eCCC
Q psy13945 68 HTND 71 (86)
Q Consensus 68 ~~~~ 71 (86)
+...
T Consensus 111 ~~~~ 114 (352)
T 2ism_A 111 RHLG 114 (352)
T ss_dssp EECS
T ss_pred EeCC
Confidence 6553
No 287
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=77.70 E-value=8 Score=22.31 Aligned_cols=57 Identities=11% Similarity=0.123 Sum_probs=34.1
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceE--EEEeC------CccceEEEE-eC----CCCeEEEEe
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSL--ASWKG------HEGEILQLV-TA----DDGTLISSS 59 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~------~~~~v~~~~-~~----~~~~~~~~~ 59 (86)
..++|.|+|+++++-...+.|+.++...+... ..+.. .......++ +| ++.++++..
T Consensus 30 ~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 30 HALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred eEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 57899999998887665567888775444432 22211 123455777 77 344444443
No 288
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=77.66 E-value=7.2 Score=21.79 Aligned_cols=67 Identities=18% Similarity=0.210 Sum_probs=39.5
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCceE--EEE----eCCccceEEEE-eCC----CCeEEEEe--CCCCEEEEeC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTSL--ASW----KGHEGEILQLV-TAD----DGTLISSS--LDQTISAWHT 69 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~----~~~~~~v~~~~-~~~----~~~~~~~~--~~~~i~~~~~ 69 (86)
..++|.|||+++++-...+.|++++...++.. ..+ .........++ +|+ +.++++.+ .+..|.-+.+
T Consensus 35 ~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~ 114 (347)
T 3das_A 35 WGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLY 114 (347)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEB
T ss_pred eEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEe
Confidence 57899999998887766889998875544432 111 11234456777 774 44444433 3334444443
No 289
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=75.73 E-value=8.3 Score=21.51 Aligned_cols=72 Identities=10% Similarity=0.066 Sum_probs=38.1
Q ss_pred eEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCeE
Q psy13945 3 RCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGSL 74 (86)
Q Consensus 3 ~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 74 (86)
..+++++++. +.++-...+.|..++................-..+...++..+++-...+.|..++..++..
T Consensus 249 nGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred eeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcc
Confidence 5678886554 44444455677777765322222222222223444422345556666677787777545543
No 290
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=75.33 E-value=8.6 Score=21.47 Aligned_cols=69 Identities=7% Similarity=-0.134 Sum_probs=36.9
Q ss_pred eeEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCC
Q psy13945 2 IRCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~ 70 (86)
...++|.+.+ .++.+-...+.|..++...................++ .+ .+.++++-...+.|.+.++.
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d 189 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD 189 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC
Confidence 3467777644 4455555567787777665443222222222233455 54 34455565556667666654
No 291
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=74.93 E-value=8.9 Score=21.49 Aligned_cols=57 Identities=9% Similarity=0.121 Sum_probs=33.9
Q ss_pred eeEEEECCCCCEEEEE-eCCCeEEEEEccC-CceE--EEEeCCccceEEEE-eC-CCCeEEEEe
Q psy13945 2 IRCIAVSSSGSWIAIG-QASGVLTLLDLRT-GTSL--ASWKGHEGEILQLV-TA-DDGTLISSS 59 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~--~~~~~~~~~v~~~~-~~-~~~~~~~~~ 59 (86)
.+.++|+||++.++.+ +..+.|..|++.. ++.. ..+ ......-.+. .. ++...+++.
T Consensus 223 pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 223 ANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred cCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 3689999999766554 4567899999763 3332 122 1122333455 56 477766553
No 292
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=74.16 E-value=19 Score=24.94 Aligned_cols=66 Identities=15% Similarity=0.161 Sum_probs=43.3
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCC
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~ 70 (86)
+..++.-..+..-...|.+.++|+.++..+..-+.....|+... ......++.....|.+.--.+.
T Consensus 264 ~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (1630)
T ss_pred EEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEc
Confidence 34455555667777889999999999988766566566665555 4445556666666666544443
No 293
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=74.05 E-value=9.1 Score=21.17 Aligned_cols=67 Identities=19% Similarity=0.280 Sum_probs=38.0
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCc-eEEEEe---CCccceEEEE-eCC----CCeEEEEeC---C----CCEEE
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGT-SLASWK---GHEGEILQLV-TAD----DGTLISSSL---D----QTISA 66 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~---~~~~~v~~~~-~~~----~~~~~~~~~---~----~~i~~ 66 (86)
..++|.|||+++++- ..+.|++++ ..++ ....+. ........++ +|+ +.++++... + ..|..
T Consensus 32 ~~ia~~pdG~l~V~e-~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r 109 (354)
T 3a9g_A 32 WSIAPLGGGRYLVTE-RPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR 109 (354)
T ss_dssp EEEEEEETTEEEEEE-TTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred eEEEEcCCCeEEEEe-CCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence 578899999866654 458888886 3444 222111 1123456777 776 444454432 2 45655
Q ss_pred EeCCC
Q psy13945 67 WHTND 71 (86)
Q Consensus 67 ~~~~~ 71 (86)
++...
T Consensus 110 ~~~~~ 114 (354)
T 3a9g_A 110 GRLDG 114 (354)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 65543
No 294
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=72.97 E-value=9.6 Score=20.94 Aligned_cols=71 Identities=10% Similarity=0.078 Sum_probs=38.3
Q ss_pred eEEEECCCCCE-EEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 3 RCIAVSSSGSW-IAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 3 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
..+++++++.. .++-...+.|..++................-..+...++..+++-...+.|...+..+++
T Consensus 206 nGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 206 NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence 57888875554 445455677888886533222222222222344442234555666666777777744443
No 295
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=71.47 E-value=9.5 Score=20.27 Aligned_cols=71 Identities=17% Similarity=0.071 Sum_probs=38.6
Q ss_pred eeEEEECCCCCEEEEEeCC--CeEEEEEccCCceEEEEeC-CccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQAS--GVLTLLDLRTGTSLASWKG-HEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~-~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
...+++.++++++++.... ..+..++..+++....... .......+. .+++..+++-..++.|..+|...+
T Consensus 74 p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 74 VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 4578899999976665432 3466677666665332221 111222333 333434444445677777776544
No 296
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=70.97 E-value=16 Score=22.56 Aligned_cols=68 Identities=13% Similarity=0.242 Sum_probs=42.3
Q ss_pred eEEEECCCCCEEE-EEeCCCeEEEEEccCCce-------------EEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEE
Q psy13945 3 RCIAVSSSGSWIA-IGQASGVLTLLDLRTGTS-------------LASWKGHEGEILQLV-TADDGTLISSSLDQTISAW 67 (86)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~-------------~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~ 67 (86)
..+..+|||++++ ++..+.++.++|...... ......-.++ .... .+++.-+.+--.|.++--|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGP-lHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGP-LHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCE-EEEEECSSSEEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcc-cEEEECCCCceEeeeeecceEEEE
Confidence 4678899999866 456678899999863211 1111111222 2334 5667555566689999999
Q ss_pred eCCC
Q psy13945 68 HTND 71 (86)
Q Consensus 68 ~~~~ 71 (86)
++..
T Consensus 405 ni~~ 408 (638)
T 3sbq_A 405 NMEE 408 (638)
T ss_dssp EHHH
T ss_pred eccH
Confidence 8753
No 297
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=69.90 E-value=12 Score=20.62 Aligned_cols=69 Identities=7% Similarity=-0.119 Sum_probs=37.9
Q ss_pred eEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCC
Q psy13945 3 RCIAVSSSGS-WIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 3 ~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~ 71 (86)
..++|++.+. ++.+-...+.|..++...................++ .+ .+.++++-...+.|.+.+...
T Consensus 76 ~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 76 IALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC
Confidence 4677775444 444544567777777664433222222222334566 55 455556666667777777653
No 298
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=68.19 E-value=12 Score=20.15 Aligned_cols=70 Identities=10% Similarity=-0.012 Sum_probs=38.5
Q ss_pred eeEEEECCCC-CEEEEEeCCCeEEEEEccC---CceEEE-EeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCC
Q psy13945 2 IRCIAVSSSG-SWIAIGQASGVLTLLDLRT---GTSLAS-WKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 2 i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~---~~~~~~-~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~ 71 (86)
..+++|++++ .++.+....+.|..++... +..... +.........++ .+ .+.++++-...+.|.+.+...
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 3577888755 4555555567888888764 122222 222222335666 65 455556666677888887654
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=68.06 E-value=7.7 Score=23.74 Aligned_cols=70 Identities=10% Similarity=-0.022 Sum_probs=34.4
Q ss_pred eEEEECCCCCEEEE-EeCCCeEEEEEccC----CceEEEEeCCccceEEEE-e-CCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 3 RCIAVSSSGSWIAI-GQASGVLTLLDLRT----GTSLASWKGHEGEILQLV-T-ADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~~~~v~~~~~~~----~~~~~~~~~~~~~v~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
..++|.+.+..|+. -...+.|+.+++.. ......+.........++ . ..+.++++-...+.|.+.+....
T Consensus 409 ~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 409 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp CCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred EEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 35667765544443 33456777777653 111111111111223455 4 34555566566677888876544
No 300
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=67.18 E-value=15 Score=20.73 Aligned_cols=71 Identities=8% Similarity=-0.050 Sum_probs=38.1
Q ss_pred eeEEEECCCCC-EEEEEeCCCeEEEEEccCC----ceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGS-WIAIGQASGVLTLLDLRTG----TSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
+..++|++.+. ++.+-...+.|+.++.... ...............++ .+ .+.++++-...+.|.+.++...
T Consensus 114 ~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred ceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence 35677876444 4444445667777776531 12222222233445666 55 4556666666777877776543
No 301
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=62.59 E-value=24 Score=21.72 Aligned_cols=71 Identities=17% Similarity=0.173 Sum_probs=43.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe--------CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK--------GHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--------~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
|.++...++|.+-+ |..++-|..++..++....-.. -....|.++. ..++..+..+..++-+..++..++
T Consensus 359 V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 359 VSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred eEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 56777777777554 5556567778866554322111 1235688888 777773445566566888887765
Q ss_pred e
Q psy13945 73 S 73 (86)
Q Consensus 73 ~ 73 (86)
+
T Consensus 438 ~ 438 (795)
T 4a2l_A 438 Q 438 (795)
T ss_dssp C
T ss_pred c
Confidence 4
No 302
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=61.54 E-value=19 Score=20.13 Aligned_cols=65 Identities=20% Similarity=0.200 Sum_probs=40.8
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEEEeCC-ccceEEEEeC----CCCeEEEE-eCCCCEEEEeCCCCeEEE
Q psy13945 12 SWIAIGQASGVLTLLDLRTGTSLASWKGH-EGEILQLVTA----DDGTLISS-SLDQTISAWHTNDGSLKC 76 (86)
Q Consensus 12 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~v~~~~~~----~~~~~~~~-~~~~~i~~~~~~~~~~~~ 76 (86)
..++.++.++.|..+|..+|+..=.+... ..+......+ ++..++.. ..|+.+..++..+|....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 46788899999999999888875444432 1222222211 22333333 579999999988775444
No 303
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=58.58 E-value=18 Score=18.98 Aligned_cols=65 Identities=9% Similarity=0.053 Sum_probs=34.0
Q ss_pred CCCEEEEEeCC-----CeEEEEEccCCceEEEEeCCccce-EEEEeCCCCeEEEEeCC-----CCEEEEeCCCCeE
Q psy13945 10 SGSWIAIGQAS-----GVLTLLDLRTGTSLASWKGHEGEI-LQLVTADDGTLISSSLD-----QTISAWHTNDGSL 74 (86)
Q Consensus 10 ~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~ 74 (86)
++..++.|+.+ ..+.+||..+.+-...-....... .+....++..++.++.+ ..+.++|.++.+.
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 45666666653 457888887654322211111111 12222355566666654 3567888877653
No 304
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=55.97 E-value=21 Score=18.97 Aligned_cols=67 Identities=12% Similarity=0.145 Sum_probs=39.3
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEEccCCce---EEEEe------CCccceEEEE-eCCCCeEEEEeCCCCEEEEeC
Q psy13945 3 RCIAVSSSGSWIAIGQASGVLTLLDLRTGTS---LASWK------GHEGEILQLV-TADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~------~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~ 69 (86)
..+++.+++.++++.-.+..+.++++..... ..... ..+...-.++ .+.+..+..+.......+|.+
T Consensus 73 EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 73 ETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp EEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred HHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 4678888888777766677888888754332 22221 1122345677 787766655554444444443
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=54.70 E-value=27 Score=19.66 Aligned_cols=68 Identities=12% Similarity=0.163 Sum_probs=44.4
Q ss_pred eeEEEE---CCCCCEEEEEeC-------------CCeEEEEEcc---CCceEEEEe--CCc-----------cceEEEE-
Q psy13945 2 IRCIAV---SSSGSWIAIGQA-------------SGVLTLLDLR---TGTSLASWK--GHE-----------GEILQLV- 48 (86)
Q Consensus 2 i~~~~~---~~~~~~~~~~~~-------------~~~v~~~~~~---~~~~~~~~~--~~~-----------~~v~~~~- 48 (86)
+.++.+ .++++++++... +..+..+|+. +++...... ... .....+.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 357888 588888876442 5778899988 666543221 111 2355677
Q ss_pred eCCCCeEEEEeCC-CCEEEEeC
Q psy13945 49 TADDGTLISSSLD-QTISAWHT 69 (86)
Q Consensus 49 ~~~~~~~~~~~~~-~~i~~~~~ 69 (86)
.+++..+++.+.. +.|...+.
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECT
T ss_pred CCCCCEEEeCCCCCCeEEEEeC
Confidence 7889999988777 66655554
No 306
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=49.85 E-value=21 Score=20.79 Aligned_cols=26 Identities=19% Similarity=0.166 Sum_probs=19.2
Q ss_pred eEEEECCCCC--EEEEEeCCCeEEEEEcc
Q psy13945 3 RCIAVSSSGS--WIAIGQASGVLTLLDLR 29 (86)
Q Consensus 3 ~~~~~~~~~~--~~~~~~~~~~v~~~~~~ 29 (86)
..++|.||+. +++ +...+.|++++..
T Consensus 17 ~~~a~~pdG~~rl~V-~er~G~i~~~~~~ 44 (463)
T 2wg3_C 17 VGALHSGDGSQRLFI-LEKEGYVKILTPE 44 (463)
T ss_dssp EEEECCSSSSCCEEE-EETTTEEEEECTT
T ss_pred eEEEECCCCCeEEEE-EeCCceEEEEeCC
Confidence 5789999985 555 4567899998643
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=49.27 E-value=28 Score=18.32 Aligned_cols=67 Identities=7% Similarity=0.032 Sum_probs=35.5
Q ss_pred CCCEEEEEeCC-----CeEEEEEccCCceEEEEeCCccce-EEEEeCCCCeEEEEeCC-----CCEEEEeCCCCeEEE
Q psy13945 10 SGSWIAIGQAS-----GVLTLLDLRTGTSLASWKGHEGEI-LQLVTADDGTLISSSLD-----QTISAWHTNDGSLKC 76 (86)
Q Consensus 10 ~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~ 76 (86)
++.+++.|+.+ ..+.+||..+.+-...-....... ..+...++.+++.|+.+ ..+.++|..+.+...
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 56666676653 357888877654322111111111 11222355666666654 358889988776443
No 308
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=45.12 E-value=53 Score=20.29 Aligned_cols=69 Identities=7% Similarity=0.082 Sum_probs=39.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCC-----ccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCe
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGH-----EGEILQLV-TADDGTLISSSLDQTISAWHTNDGS 73 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 73 (86)
|.++...+++++.+.. . .-+..+|..+++........ ...|.++. ..++.+.+... .+-+..++..++.
T Consensus 452 v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 452 VRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-GGGVGIYTPDMQL 526 (781)
T ss_dssp EEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-SSCEEEECTTCCE
T ss_pred EEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-CCCEEEEeCCCCe
Confidence 5566667777655543 3 45777887665443222111 35677887 66776655443 3336667765543
No 309
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=44.91 E-value=43 Score=19.22 Aligned_cols=75 Identities=8% Similarity=0.117 Sum_probs=47.2
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeCCC-CeEEEeecCCC
Q psy13945 5 IAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHTND-GSLKCNIQGPT 82 (86)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~ 82 (86)
.-.+|..+.++.-. ..++.++|+++.+.+..+.- .+.|.....-+...+. --.+..+.-|++.. ..+.+.|..|.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~L~-lVT~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVA-LVTDNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSEEE-EEESSEEEEEESSTTCCCEEEEECCG
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCeEE-EEcCCcEEEEcccCCCCCceeeecch
Confidence 44577777666554 78999999998888777664 3566666533333332 22345678888763 45666665553
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=43.13 E-value=37 Score=17.91 Aligned_cols=66 Identities=9% Similarity=0.067 Sum_probs=34.6
Q ss_pred CCCEEEEEeCC----CeEEEEEccCCceEEEEeCCccce-EEEEeCCCCeEEEEeCC------CCEEEEeCCCCeEE
Q psy13945 10 SGSWIAIGQAS----GVLTLLDLRTGTSLASWKGHEGEI-LQLVTADDGTLISSSLD------QTISAWHTNDGSLK 75 (86)
Q Consensus 10 ~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~ 75 (86)
++.+++.|+.+ ..+.++|..+.+-...-....... .++...++.+++.|+.+ ..+.++|..+....
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 55666666644 457788877654322211111111 11222355666666644 46788888776543
No 311
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=42.53 E-value=59 Score=20.10 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=38.0
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEEe---CCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCC
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASWK---GHEGEILQLV-TADDGTLISSSLDQTISAWHTNDG 72 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~ 72 (86)
|.++...+++++.+ |...+-+..++..+++.. .+. .....|.++. .+++.+.+.. . .-+..++..++
T Consensus 409 v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~ 479 (781)
T 3v9f_A 409 VLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASK 479 (781)
T ss_dssp EEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSS
T ss_pred eEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCC
Confidence 45666666676554 444456777776555432 222 1235677777 6666655443 3 45777776554
No 312
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=41.17 E-value=48 Score=18.70 Aligned_cols=68 Identities=10% Similarity=-0.009 Sum_probs=37.0
Q ss_pred eEEEECC-CCCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC-CCeEEEEeC-CCCEEEEeCC
Q psy13945 3 RCIAVSS-SGSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD-DGTLISSSL-DQTISAWHTN 70 (86)
Q Consensus 3 ~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~-~~~i~~~~~~ 70 (86)
..+++.+ .++++++-...+.|.+.+.........+.........++ .|. +.++.+-.. .+.|...++.
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 4566665 344555555567777777654433333332333456677 775 444455433 3677777664
No 313
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=39.51 E-value=72 Score=20.27 Aligned_cols=68 Identities=10% Similarity=-0.022 Sum_probs=37.8
Q ss_pred eEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCC-CCeEEEEeCC-CCEEEEeCC
Q psy13945 3 RCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TAD-DGTLISSSLD-QTISAWHTN 70 (86)
Q Consensus 3 ~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~-~~~~~~~~~~-~~i~~~~~~ 70 (86)
..+++...+ +++++-...+.|.+.++..................++ .|. +.++++-... +.|...++.
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 356666555 4455555567788888664333222233334456777 775 4455554333 567777664
No 314
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=38.47 E-value=65 Score=19.41 Aligned_cols=37 Identities=5% Similarity=-0.009 Sum_probs=28.6
Q ss_pred ceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEeec
Q psy13945 43 EILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCNIQ 79 (86)
Q Consensus 43 ~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 79 (86)
.-.++. ++....+..-..-+.+.++|+.++.++..-+
T Consensus 260 FPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 334566 7777777778888999999999998886543
No 315
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=37.69 E-value=57 Score=19.42 Aligned_cols=24 Identities=29% Similarity=0.484 Sum_probs=13.3
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTL 25 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~ 25 (86)
|..+.++++...++.++..+.+++
T Consensus 464 I~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 464 ISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CCEEEEETTTTEEEEEBSSCEEEE
T ss_pred cceEEEcCCCCEEEEEECCeEEEE
Confidence 445556666666666655554443
No 316
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=34.64 E-value=1e+02 Score=20.66 Aligned_cols=63 Identities=14% Similarity=-0.019 Sum_probs=38.4
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEE-eCC------CCeEEEEeC-CCCEEEEeCCCCeEE
Q psy13945 12 SWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLV-TAD------DGTLISSSL-DQTISAWHTNDGSLK 75 (86)
Q Consensus 12 ~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~~------~~~~~~~~~-~~~i~~~~~~~~~~~ 75 (86)
.+++.+. .+.+.++.+..+...... ..-...|.|++ .+. ...++.|.+ |++++++++.+.+.+
T Consensus 524 ~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~ 595 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 595 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE
T ss_pred CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE
Confidence 3444443 566766666544322111 12345788988 642 357777876 999999998765544
No 317
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=33.30 E-value=84 Score=19.22 Aligned_cols=73 Identities=5% Similarity=-0.037 Sum_probs=41.6
Q ss_pred eEEEECCCCCE-EEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCCeEEEEeCCCCEEEEeCCCCeEEEe
Q psy13945 3 RCIAVSSSGSW-IAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDGTLISSSLDQTISAWHTNDGSLKCN 77 (86)
Q Consensus 3 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (86)
..+++++++.. ..+-.....|..++...... ..+......-..++ .. +..+++-...+.|...|..++.....
T Consensus 169 ~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred ceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEE
Confidence 56788876554 44444566788888754332 22222222334555 54 45566666677888888666643333
No 318
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=33.17 E-value=60 Score=17.47 Aligned_cols=68 Identities=12% Similarity=0.046 Sum_probs=36.9
Q ss_pred eEEEECCC-CCEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eCCCC-eEEEEeCC-CCEEEEeCC
Q psy13945 3 RCIAVSSS-GSWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TADDG-TLISSSLD-QTISAWHTN 70 (86)
Q Consensus 3 ~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~~~~~~~~-~~i~~~~~~ 70 (86)
..+++.+. +++.++-...+.|.+.+...................++ .|.+. ++++.... +.|...++.
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 35666653 44455555667888888654332222222234456777 77544 44454333 567766654
No 319
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=32.66 E-value=88 Score=19.24 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=31.9
Q ss_pred EEEECCCCCEEEEEeCC------------CeEEEEEccCCceEEEEeCC-ccceEEEE-eCCCCeEE
Q psy13945 4 CIAVSSSGSWIAIGQAS------------GVLTLLDLRTGTSLASWKGH-EGEILQLV-TADDGTLI 56 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~~~~~~-~~~v~~~~-~~~~~~~~ 56 (86)
-++|++.|+++++-+.+ ..+.+.+..+++...-+.+. ..++..+. +|++..+.
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEE
Confidence 47899999988876543 13445555556654444443 34666666 77766543
No 320
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=31.39 E-value=76 Score=18.10 Aligned_cols=66 Identities=15% Similarity=0.253 Sum_probs=38.5
Q ss_pred EEEE--CCC-CC-EEEEEeCCCeEEEEEcc---CC----ceEEEEeCCccceEEEEeCCCCeEEEEeCCCCEEEEeC
Q psy13945 4 CIAV--SSS-GS-WIAIGQASGVLTLLDLR---TG----TSLASWKGHEGEILQLVTADDGTLISSSLDQTISAWHT 69 (86)
Q Consensus 4 ~~~~--~~~-~~-~~~~~~~~~~v~~~~~~---~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~~~~ 69 (86)
.+++ ++. +. +++....++.+..|++. .+ +...++.-..+.-.|+..+....++.+-.+.-|-.++.
T Consensus 132 Glcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 132 GFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp CEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEEC
T ss_pred EEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeC
Confidence 4566 663 43 57777788999988873 22 33445544333333333676677777777654544453
No 321
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=29.79 E-value=72 Score=17.35 Aligned_cols=67 Identities=12% Similarity=-0.008 Sum_probs=35.3
Q ss_pred eEEEECCCCCEEEEEeC--CCeEEEEEccCCceEEEE-eCCccceEEEE-eCC-CCeEEEEeCCCCEEEEeCC
Q psy13945 3 RCIAVSSSGSWIAIGQA--SGVLTLLDLRTGTSLASW-KGHEGEILQLV-TAD-DGTLISSSLDQTISAWHTN 70 (86)
Q Consensus 3 ~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~~-~~~~~~~~~~~~i~~~~~~ 70 (86)
..+++.|.+..++.... .+.|...+.. +.....+ ...-..-..+. .++ +.++++-...+.|..+++.
T Consensus 125 ~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 125 RAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp EEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 45666665444444432 4566666654 2222222 12222335677 764 4455565666788888875
No 322
>3u0a_A Acyl-COA thioesterase II TESB2; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, hydrolase; 2.50A {Mycobacterium marinum}
Probab=29.58 E-value=64 Score=17.46 Aligned_cols=10 Identities=10% Similarity=0.076 Sum_probs=5.0
Q ss_pred EEEEEccCCce
Q psy13945 23 LTLLDLRTGTS 33 (86)
Q Consensus 23 v~~~~~~~~~~ 33 (86)
-.+||. .|+.
T Consensus 255 g~i~~~-~G~L 264 (285)
T 3u0a_A 255 GKIFTQ-GGEL 264 (285)
T ss_dssp EEEEET-TCCE
T ss_pred EEEECC-CCCE
Confidence 356663 4443
No 323
>2oqj_C Peptide 2G12.1 (ACPPSHVLDMRSGTCLAAEGK); immunoglobulin fold, immune system; 2.80A {Homo sapiens}
Probab=29.37 E-value=22 Score=11.32 Aligned_cols=12 Identities=8% Similarity=0.135 Sum_probs=8.1
Q ss_pred EEEeCCCCeEEE
Q psy13945 65 SAWHTNDGSLKC 76 (86)
Q Consensus 65 ~~~~~~~~~~~~ 76 (86)
.+.|++.|.|+.
T Consensus 6 hvldmrsgtcla 17 (26)
T 2oqj_C 6 HVLDMRSGTCLA 17 (26)
T ss_pred heeeccCCceEe
Confidence 356777777764
No 324
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=28.44 E-value=96 Score=19.45 Aligned_cols=26 Identities=27% Similarity=0.401 Sum_probs=18.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEE
Q psy13945 1 LIRCIAVSSSGSWIAIGQASGVLTLL 26 (86)
Q Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~v~~~ 26 (86)
+|..+.++++...++.++..+.+++-
T Consensus 471 pI~~L~ld~~~~~LYV~t~~~V~kVP 496 (667)
T 4gz8_A 471 TISAMELSTKQQQLYIGSTAGVAQLP 496 (667)
T ss_dssp CCCEEEEETTTTEEEEEBSSCEEEEE
T ss_pred eeeeEEEcCCCCEEEEEECCEEEEEE
Confidence 35667788888888888777766654
No 325
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=27.38 E-value=14 Score=21.90 Aligned_cols=19 Identities=21% Similarity=0.382 Sum_probs=11.6
Q ss_pred EEeCCCeEEEEEccCCceE
Q psy13945 16 IGQASGVLTLLDLRTGTSL 34 (86)
Q Consensus 16 ~~~~~~~v~~~~~~~~~~~ 34 (86)
.+..+|.+++||++..+.+
T Consensus 162 ~~~~~GVVrvWDVkd~slL 180 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAELL 180 (577)
T ss_dssp ----CCEECSEECSCGGGG
T ss_pred CCCCCCeEEEEecCCHHHH
Confidence 4566889999998766543
No 326
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=26.91 E-value=1.1e+02 Score=18.65 Aligned_cols=69 Identities=6% Similarity=-0.134 Sum_probs=36.5
Q ss_pred eEEEECCCC-CEEEEEeCCCeEEEEEccCCceEEEEeCCccceEEEE-eC-CCCeEEEEeCCCCEEEEeCCC
Q psy13945 3 RCIAVSSSG-SWIAIGQASGVLTLLDLRTGTSLASWKGHEGEILQLV-TA-DDGTLISSSLDQTISAWHTND 71 (86)
Q Consensus 3 ~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~~-~~~~~~~~~~~~~i~~~~~~~ 71 (86)
.+++|.+.+ .++++-...+.|+.++.............-.....++ .+ .+.++.+-...+.|.+.++..
T Consensus 352 ~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 352 IAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC
Confidence 456676643 4444444466677776553322222222223344566 54 455666666667777777653
No 327
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=26.07 E-value=1e+02 Score=19.36 Aligned_cols=28 Identities=14% Similarity=0.099 Sum_probs=19.6
Q ss_pred ECCCCCEEEE-----EeCCCeEEEEEccCCceE
Q psy13945 7 VSSSGSWIAI-----GQASGVLTLLDLRTGTSL 34 (86)
Q Consensus 7 ~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~ 34 (86)
++||+++++. |++-..++++|+.+++.+
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~ 169 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFV 169 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEEC
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcC
Confidence 7889877553 333456899999887654
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=25.71 E-value=82 Score=16.67 Aligned_cols=66 Identities=11% Similarity=0.114 Sum_probs=34.3
Q ss_pred CCCEEEEEeCC-----CeEEEEEccCCceEEEEeCCccc-eEEEEeCCCCeEEEEeCC-----CCEEEEeCCCCeEE
Q psy13945 10 SGSWIAIGQAS-----GVLTLLDLRTGTSLASWKGHEGE-ILQLVTADDGTLISSSLD-----QTISAWHTNDGSLK 75 (86)
Q Consensus 10 ~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~ 75 (86)
++.+++.|+.+ ..+.++|..+.+-...-...... -.++...++.+++.|+.+ ..+.++|+.+.+..
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 56666666553 45788887765432211111111 112222355666666643 35778888877544
No 329
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=22.77 E-value=73 Score=15.02 Aligned_cols=12 Identities=33% Similarity=0.396 Sum_probs=8.1
Q ss_pred EEECCCCCEEEE
Q psy13945 5 IAVSSSGSWIAI 16 (86)
Q Consensus 5 ~~~~~~~~~~~~ 16 (86)
+.|+++|+.++.
T Consensus 37 I~W~~~G~sFvV 48 (125)
T 2ldu_A 37 ICWSPSGNSFHV 48 (125)
T ss_dssp EEECTTSSEEEE
T ss_pred EEEcCCCCEEEE
Confidence 678887775543
No 330
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=22.42 E-value=1e+02 Score=16.66 Aligned_cols=64 Identities=14% Similarity=0.176 Sum_probs=31.1
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEEccCCceEEEE-eCCccceEEEE-eCCCCeEEEEeCCCCEEEE
Q psy13945 2 IRCIAVSSSGSWIAIGQASGVLTLLDLRTGTSLASW-KGHEGEILQLV-TADDGTLISSSLDQTISAW 67 (86)
Q Consensus 2 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~~~~~~~i~~~ 67 (86)
+..+.+.+++.+++.+......+-.|- .++.-... ......+..+. .+++..++. +.++.+...
T Consensus 165 ~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s 230 (327)
T 2xbg_A 165 MRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFS 230 (327)
T ss_dssp EEEEEECTTSCEEEEETTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEE
T ss_pred eEEEEEcCCCcEEEEECCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCEEEE-eCCceEEEe
Confidence 457788888887776654433333332 12221111 22334555666 566655433 334444443
No 331
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=21.87 E-value=71 Score=14.53 Aligned_cols=17 Identities=12% Similarity=0.131 Sum_probs=12.9
Q ss_pred CCEEEEeCCCCeEEEee
Q psy13945 62 QTISAWHTNDGSLKCNI 78 (86)
Q Consensus 62 ~~i~~~~~~~~~~~~~~ 78 (86)
.++.+|+..+|..+.++
T Consensus 17 E~V~IvNvnNG~RfeTY 33 (97)
T 1uhe_A 17 MKVEIVDVNNGERFSTY 33 (97)
T ss_dssp CEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCceEEEE
Confidence 36789999988877654
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=21.58 E-value=1e+02 Score=16.33 Aligned_cols=66 Identities=8% Similarity=0.055 Sum_probs=32.8
Q ss_pred CCCEEEEEeC------CCeEEEEEccCCceEEEEeCCccce-EEEEeCCCCeEEEEeCCC-----CEEEEeCCCCeEE
Q psy13945 10 SGSWIAIGQA------SGVLTLLDLRTGTSLASWKGHEGEI-LQLVTADDGTLISSSLDQ-----TISAWHTNDGSLK 75 (86)
Q Consensus 10 ~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~ 75 (86)
++..++.|+. ...+.++|..+.+-...-....... .+....++.+++.|+.+. .+.++|..+....
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 4566666665 1357788876554322111111111 122223556666666543 4677888766543
No 333
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=20.58 E-value=76 Score=14.40 Aligned_cols=17 Identities=6% Similarity=0.272 Sum_probs=12.9
Q ss_pred CCEEEEeCCCCeEEEee
Q psy13945 62 QTISAWHTNDGSLKCNI 78 (86)
Q Consensus 62 ~~i~~~~~~~~~~~~~~ 78 (86)
.++.+|+..+|..+.++
T Consensus 18 E~V~IvNvnNG~Rf~TY 34 (96)
T 1vc3_B 18 EQVDIYDITNGARLTTY 34 (96)
T ss_dssp CEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCceEEEE
Confidence 36789999988877654
Done!