RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13946
(90 letters)
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 71.4 bits (175), Expect = 2e-17
Identities = 36/58 (62%), Positives = 41/58 (70%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDS 58
M EDE+TP+KRV+KIF+ MDKN D +LTLEEF EGSK DP IV ALSL D
Sbjct: 131 MVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALSLYDG 188
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 69.8 bits (171), Expect = 7e-17
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDS 58
M E+TP++ VD F +MDKN D +TL+EF E + D I+++L L +
Sbjct: 124 MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRSLQLFQN 181
Score = 27.9 bits (62), Expect = 0.35
Identities = 7/41 (17%), Positives = 11/41 (26%)
Query: 2 FKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREG 42
FK Q +F+ D + E+F
Sbjct: 41 FKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTA 81
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 69.9 bits (171), Expect = 1e-16
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 55
M EDE+TP+KR +KIF QMD N D +L+LEEF G+K+DP IV+ L
Sbjct: 131 MVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLLQC 185
Score = 26.3 bits (58), Expect = 1.3
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
K + +F D N D + EF
Sbjct: 57 PYGDASKFAEHVFRTFDANGDGTIDFREF 85
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 69.5 bits (170), Expect = 1e-16
Identities = 37/57 (64%), Positives = 43/57 (75%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGD 57
M E+ENTP+KRVD+IF MDKN D +LTL+EF+EGSKADP IVQALSL D
Sbjct: 131 MVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSLYD 187
Score = 24.0 bits (52), Expect = 7.3
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 14 TPQKRVDKIFDQMDKNHDDRLTLEEFREG 42
P K +F+ D+N D R+ EF +
Sbjct: 60 DPTKFATFVFNVFDENKDGRIEFSEFIQA 88
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 68.7 bits (168), Expect = 3e-16
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGD 57
M +EDE TP+ RV KIF MDKN D +TL+EFREGSK DP I+ AL+L D
Sbjct: 131 MMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYD 187
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 68.8 bits (168), Expect = 4e-16
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDS 58
M E+ P++ V+ F +MDKN D +T++EF E + D I++++ L ++
Sbjct: 170 MMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFEN 227
Score = 27.2 bits (60), Expect = 0.69
Identities = 5/29 (17%), Positives = 13/29 (44%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ +F+ D +H+ ++ E+F
Sbjct: 96 PQGDSTTYAHFLFNAFDTDHNGAVSFEDF 124
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 67.3 bits (164), Expect = 1e-15
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 5 QQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 55
+ +DENTP+KR +KI+ KN DD+LT +EF EG+ A+ I++ +
Sbjct: 145 VKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANKEILRLIQF 195
Score = 25.3 bits (55), Expect = 3.0
Identities = 8/41 (19%), Positives = 15/41 (36%)
Query: 2 FKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREG 42
F+ + + P+ +F D N D L +E+
Sbjct: 56 FQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIA 96
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 66.4 bits (162), Expect = 2e-15
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDSS 59
+ + Q TP++ VD+IF +D+N D +L+L EF EG++ D +++ L + +
Sbjct: 132 SVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQMDLNP 190
Score = 25.9 bits (57), Expect = 1.8
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 7 PQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ D + V+ +F D N D+ + E+
Sbjct: 49 FKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEY 81
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 66.5 bits (162), Expect = 3e-15
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDS 58
M E+TP++ VD F +MDKN D +TL+EF E + D I+++L L +
Sbjct: 157 MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQN 214
Score = 26.5 bits (58), Expect = 1.1
Identities = 7/38 (18%), Positives = 11/38 (28%)
Query: 2 FKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
FK Q +F+ D + E+F
Sbjct: 74 FKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF 111
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 64.4 bits (157), Expect = 2e-14
Identities = 11/55 (20%), Positives = 29/55 (52%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 55
+ E+ + VDK F Q D+ +D ++ ++E+++ +P +++ ++L
Sbjct: 139 ALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTL 193
Score = 26.7 bits (59), Expect = 1.1
Identities = 9/35 (25%), Positives = 13/35 (37%)
Query: 5 QQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
Q + N D+IFD D + + EF
Sbjct: 62 QLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEF 96
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 62.9 bits (153), Expect = 5e-14
Identities = 8/55 (14%), Positives = 21/55 (38%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 55
+ + + ++ +D I ++ D + D + L EF+ P + +
Sbjct: 127 LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKI 181
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 62.9 bits (153), Expect = 5e-14
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 5 QQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 55
+ + T ++ + +FD++D N D L+LEEF EG + D ++ L+
Sbjct: 119 AINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTR 169
Score = 27.0 bits (60), Expect = 0.70
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 2 FKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
FK + K V+++F+ D N D + E+
Sbjct: 37 FKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEY 74
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 63.9 bits (155), Expect = 5e-14
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDS 58
M E+ P + V++ F +MD+N D +T++EF E + D I+ ++ L ++
Sbjct: 197 MMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQLFEN 254
Score = 25.8 bits (56), Expect = 2.4
Identities = 7/38 (18%), Positives = 14/38 (36%)
Query: 2 FKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
FK Q + +F+ D + + + E+F
Sbjct: 114 FKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDF 151
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 63.3 bits (154), Expect = 6e-14
Identities = 11/55 (20%), Positives = 26/55 (47%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 55
+ + + + +DK F++ D HD ++ EE+R P +++ ++L
Sbjct: 150 ATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL 204
Score = 25.2 bits (55), Expect = 2.8
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 5 QQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
Q + D++FD D H+ L EEF
Sbjct: 73 QLALFKTNKKESLFADRVFDLFDTKHNGILGFEEF 107
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 62.1 bits (151), Expect = 1e-13
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 10 EDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLG-DSSNV 61
+ +P++ ++ +F ++D N+D LTLEEF G D +++ + D SNV
Sbjct: 128 QQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYKSFDFSNV 180
Score = 25.5 bits (56), Expect = 2.2
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 14 TPQKRVDKIFDQMDKNHDDRLTLEEF 39
K +D++++ D N D + EF
Sbjct: 54 KANKHIDQVYNTFDTNKDGFVDFLEF 79
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 58.7 bits (142), Expect = 3e-12
Identities = 8/55 (14%), Positives = 21/55 (38%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 55
+ + + ++ +D I ++ D + D + L EF+ P + +
Sbjct: 158 LTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKI 212
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 42.8 bits (101), Expect = 2e-06
Identities = 7/45 (15%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 55
+ D+ + D++ D ++ EF + + + Q +S+
Sbjct: 148 SDEQLGSIADRTIQEADQDGDSAISFTEFVKVLE-KVDVEQKMSI 191
Score = 25.1 bits (55), Expect = 3.5
Identities = 4/20 (20%), Positives = 9/20 (45%)
Query: 20 DKIFDQMDKNHDDRLTLEEF 39
D+I + +D++ F
Sbjct: 64 DRIINAFFSEGEDQVNFRGF 83
Score = 24.7 bits (54), Expect = 4.0
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 21 KIFDQMDKNHDDRLTLEEFRE 41
F +DK + L+ E+F+
Sbjct: 33 SRFTSLDKGENGTLSREDFQR 53
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 40.3 bits (94), Expect = 5e-06
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 10 EDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKAD 46
E E + + + +D N D +TLEEF ++
Sbjct: 65 EMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRK 101
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 34.9 bits (80), Expect = 8e-04
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 5 QQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREG 42
+Q E+ +D + DKN+D + EF +
Sbjct: 104 EQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKS 141
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 35.1 bits (81), Expect = 0.001
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDSSN 60
++ G + S+DE IF +MDKN D +L E EG K R+ + ++
Sbjct: 322 LYMGSKLTSQDETKELT---AIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 378
Query: 61 VAPS 64
Sbjct: 379 AVEH 382
Score = 32.7 bits (75), Expect = 0.007
Identities = 6/31 (19%), Positives = 16/31 (51%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ + + ++DKN+D + +EF++
Sbjct: 446 VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 476
Score = 32.4 bits (74), Expect = 0.009
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 3 KGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF------REGSKADPRIVQALSLG 56
KGQ D + + VD++ D +D + + + EF R+ + R+ +A +
Sbjct: 368 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMF 427
Query: 57 DSSN 60
DS N
Sbjct: 428 DSDN 431
Score = 27.4 bits (61), Expect = 0.66
Identities = 4/26 (15%), Positives = 14/26 (53%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFRE 41
++R+++ F D ++ +++ E
Sbjct: 417 RERLERAFRMFDSDNSGKISSTELAT 442
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 34.8 bits (79), Expect = 0.002
Identities = 10/71 (14%), Positives = 22/71 (30%), Gaps = 8/71 (11%)
Query: 18 RVDKIFDQMDKNHDDRLTLEEFREG-SKADPRIVQALSLGDSSNVAPSGSSPASASAASP 76
R ++ D + ++L+ + + + + L P +P
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-----CRPQDLPREVLTTNP 327
Query: 77 LVLERDIMAER 87
L I+AE
Sbjct: 328 RRL--SIIAES 336
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 32.5 bits (75), Expect = 0.002
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 19 VDKIFDQMDKNHDDRLTLEEFREG 42
+ +F ++D N D ++ EE +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAF 25
Score = 28.3 bits (64), Expect = 0.082
Identities = 5/30 (16%), Positives = 13/30 (43%)
Query: 12 ENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
++ + IF +D + + + EF +
Sbjct: 31 AIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 34.3 bits (79), Expect = 0.002
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 5 QQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREG 42
+ S++E IF +DKN D +L +E +G
Sbjct: 337 SKLTSQEETKELT---DIFRHIDKNGDGQLDRQELIDG 371
Score = 33.1 bits (76), Expect = 0.006
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
++ K ++ +D N+D + EEF +
Sbjct: 454 LDHLESKTWKEMISGIDSNNDGDVDFEEFCK 484
Score = 32.7 bits (75), Expect = 0.009
Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 6/65 (9%)
Query: 2 FKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF------REGSKADPRIVQALSL 55
G++ D + VD I D + + + EF R+ + ++ A
Sbjct: 375 LSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQK 434
Query: 56 GDSSN 60
D
Sbjct: 435 FDQDG 439
Score = 27.0 bits (60), Expect = 0.72
Identities = 3/26 (11%), Positives = 16/26 (61%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ +++ F + D++ + +++++E
Sbjct: 425 KDKLESAFQKFDQDGNGKISVDELAS 450
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 34.0 bits (78), Expect = 0.003
Identities = 6/31 (19%), Positives = 14/31 (45%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
E + D+ + D++ D ++ EF +
Sbjct: 149 TEEQLENIADRTVQEADEDGDGAVSFVEFTK 179
Score = 24.7 bits (54), Expect = 4.1
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 21 KIFDQMDKNHDDRLTLEEF 39
F +D+N L+ +
Sbjct: 33 HRFRALDRNKKGYLSRMDL 51
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 33.9 bits (78), Expect = 0.003
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
IF ++DKN D +L +E EG
Sbjct: 359 DIFKKLDKNGDGQLDKKELIEG 380
Score = 33.1 bits (76), Expect = 0.006
Identities = 6/31 (19%), Positives = 15/31 (48%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ +K + + + D+N D+ + +EF
Sbjct: 463 LTSISEKTWNDVLGEADQNKDNMIDFDEFVS 493
Score = 32.0 bits (73), Expect = 0.015
Identities = 6/38 (15%), Positives = 17/38 (44%)
Query: 2 FKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + + + ++ VD I ++D + + + EF
Sbjct: 384 LRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEF 421
Score = 27.4 bits (61), Expect = 0.64
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFRE 41
++R+ + F+ D + ++T EE
Sbjct: 434 EERLRRAFNLFDTDKSGKITKEELAN 459
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 33.5 bits (77), Expect = 0.004
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
+IF ++D N+D L +E G
Sbjct: 335 EIFRKLDTNNDGMLDRDELVRG 356
Score = 32.7 bits (75), Expect = 0.007
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 10 EDENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
D + + ++ I +Q+D N D + EF E
Sbjct: 446 ADSSIQMEELESIIEQVDNNKDGEVDFNEFVE 477
Score = 32.3 bits (74), Expect = 0.010
Identities = 9/63 (14%), Positives = 22/63 (34%), Gaps = 6/63 (9%)
Query: 4 GQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF------REGSKADPRIVQALSLGD 57
+ +T + ++D + +D + + EF R + R+ +A + D
Sbjct: 368 SNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFD 427
Query: 58 SSN 60
Sbjct: 428 KDG 430
Score = 26.6 bits (59), Expect = 1.3
Identities = 5/26 (19%), Positives = 16/26 (61%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFRE 41
++R+++ F DK+ +++ +E +
Sbjct: 416 RERMERAFKMFDKDGSGKISTKELFK 441
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 31.9 bits (73), Expect = 0.005
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEF 39
+ +D +F ++DKN D ++ EEF
Sbjct: 46 PRTLDDLFQELDKNGDGEVSFEEF 69
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 33.0 bits (75), Expect = 0.006
Identities = 3/27 (11%), Positives = 9/27 (33%)
Query: 15 PQKRVDKIFDQMDKNHDDRLTLEEFRE 41
V +++ + L ++E
Sbjct: 137 QCADVPAVYNVITDGGKVTFDLNRYKE 163
Score = 28.3 bits (63), Expect = 0.22
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFR 40
+ ++ Q R+ +F MD + D + LEEF+
Sbjct: 89 TIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQ 128
Score = 28.3 bits (63), Expect = 0.24
Identities = 7/30 (23%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 17 KRVDKIFDQM-DKNHDDRLTLEEFREGSKA 45
+++ FD D NHD + +F +
Sbjct: 8 QKIKFTFDFFLDMNHDGSIQDNDFEDMMTR 37
Score = 24.5 bits (53), Expect = 6.3
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 20 DKIFDQMDKNHDDRLTLEEFRE 41
+ + D N DD ++ EE+
Sbjct: 63 RDLKGRADINKDDVVSWEEYLA 84
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 32.9 bits (75), Expect = 0.006
Identities = 6/23 (26%), Positives = 8/23 (34%)
Query: 19 VDKIFDQMDKNHDDRLTLEEFRE 41
D FD + +T E F
Sbjct: 145 CDAAFDTLSDGGKTMVTREIFAR 167
Score = 27.5 bits (61), Expect = 0.46
Identities = 7/38 (18%), Positives = 15/38 (39%)
Query: 3 KGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFR 40
K + K ++ +FD D + D+ + E+
Sbjct: 95 KSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYS 132
Score = 27.1 bits (60), Expect = 0.62
Identities = 7/30 (23%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 QKRVDKIFDQM-DKNHDDRLTLEEFREGSK 44
+ ++ ++F+ D NHD + ++F K
Sbjct: 11 RNKILRVFNTFYDCNHDGVIEWDDFELAIK 40
Score = 25.6 bits (56), Expect = 2.6
Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 2 FKGQQPQSEDENTPQKRVDKIFDQM----DKNHDDRLTLEEFREG 42
+ N + + I+D + D+N D+++T EE+ +
Sbjct: 45 LHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKM 89
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein;
2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1
PDB: 1eg4_A
Length = 261
Score = 32.7 bits (74), Expect = 0.007
Identities = 6/44 (13%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 12 ENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 55
+ + V F N+ + F + + +P+ + L +
Sbjct: 211 GSNIEPSVRSCFQFA--NNKPEIEAALFLDWMRLEPQSMVWLPV 252
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100
protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2
PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Length = 100
Score = 32.1 bits (73), Expect = 0.007
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 12 ENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + +F++ DKN D ++ EF
Sbjct: 47 DKKGTNYLADVFEKKDKNEDKKIDFSEF 74
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response,
metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A*
2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 31.7 bits (72), Expect = 0.009
Identities = 8/39 (20%), Positives = 19/39 (48%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + + + +D+IF +D N D+++ +EF
Sbjct: 39 LLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEF 77
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 32.7 bits (74), Expect = 0.009
Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 17/88 (19%)
Query: 2 FKGQQPQSE--DE-----NTPQKRVDKIFDQMDKNHDDRLTLEEF-REGSKADPRIVQAL 53
F GQ + +E T V + + TL E R A+ Q L
Sbjct: 160 FGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAE------TLSELIRTTLDAEKVFTQGL 213
Query: 54 SLG---DSSNVAPSGSSPASASAASPLV 78
++ ++ + P S + PL+
Sbjct: 214 NILEWLENPSNTPDKDYLLSIPISCPLI 241
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal
binding protein; NMR {Neanthes diversicolor} SCOP:
a.39.1.5 PDB: 2scp_A
Length = 174
Score = 32.0 bits (73), Expect = 0.011
Identities = 6/42 (14%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 17 KRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDS 58
+++ F+++D + D +T +F ++ R + +
Sbjct: 6 QKMKTYFNRIDFDKDGAITRMDFESMAE---RFAKESEMKAE 44
Score = 31.6 bits (72), Expect = 0.015
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 19 VDKIFDQMDKNHDDRLTLEEFRE 41
FD +D N+D L+LEEF
Sbjct: 130 APASFDAIDTNNDGLLSLEEFVI 152
Score = 28.1 bits (63), Expect = 0.31
Identities = 7/41 (17%), Positives = 17/41 (41%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
K E ++ + + F +D N D+ ++ +E+
Sbjct: 78 SMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGI 118
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 31.3 bits (71), Expect = 0.011
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + + P + VDKI +D+ D ++ + F
Sbjct: 33 LMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSF 71
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein;
2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A
2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Length = 106
Score = 31.3 bits (71), Expect = 0.014
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 14 TPQKRVDKIFDQMDKNHDDRLTLEEF 39
+D+ +D N D L E+
Sbjct: 59 KDVGSLDEKMKSLDVNQDSELKFNEY 84
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO,
EF-hand calcium binding proteins, S100 proteins,
protein dynamics, binding protein; 2.10A {Homo sapiens}
PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 30.9 bits (70), Expect = 0.016
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
M + + + +K DK+ +D NHD R++ +E+
Sbjct: 39 MLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEY 77
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens}
PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 30.5 bits (69), Expect = 0.018
Identities = 7/39 (17%), Positives = 17/39 (43%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + P + T + K+ +D N D+ + +E+
Sbjct: 37 LLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEY 75
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding
protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2
PDB: 1irj_A*
Length = 113
Score = 30.6 bits (69), Expect = 0.026
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 10 EDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ EN +K ++ I + +D N D +L+ EEF
Sbjct: 49 KKENKNEKVIEHIMEDLDTNADKQLSFEEF 78
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 31.1 bits (71), Expect = 0.027
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
++F ++D NH+ L+ E
Sbjct: 43 ELFYKLDTNHNGSLSHREIYTV 64
Score = 24.2 bits (53), Expect = 7.2
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 15 PQKRVDKIFDQMDKNHDDRLTLEEF 39
+ +++I +D N +T EF
Sbjct: 71 KKWDINRILQALDINDRGNITYTEF 95
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer,
X-type four-helix bundle, metal binding protein; NMR
{Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A
2kbm_A 2l0p_A 2jpt_A
Length = 93
Score = 30.1 bits (68), Expect = 0.029
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + + D VDKI ++D+N D + +EF
Sbjct: 36 LLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEF 74
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 30.8 bits (70), Expect = 0.032
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
+ F Q+D++ L +EFR+G
Sbjct: 41 RFFRQLDRDGSRSLDADEFRQG 62
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding
protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A
1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X*
3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A*
3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Length = 92
Score = 29.8 bits (67), Expect = 0.035
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + +E Q+ VDK+ + +D N D +EF
Sbjct: 36 LINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEF 74
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 29.8 bits (67), Expect = 0.039
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + + P + VDK+ +D N D ++ EF
Sbjct: 36 LMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEF 74
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor
supressor, CAL binding protein; 1.30A {Homo sapiens}
PDB: 2rgi_A 4duq_A
Length = 98
Score = 29.8 bits (67), Expect = 0.042
Identities = 7/39 (17%), Positives = 19/39 (48%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + P E ++ + K+ +D+N D ++ +E+
Sbjct: 38 LLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEY 76
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding
protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2
PDB: 1mr8_A
Length = 93
Score = 29.7 bits (67), Expect = 0.043
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEF 39
+K D F ++D N D + +EF
Sbjct: 48 KKGADVWFKELDINTDGAVNFQEF 71
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 30.5 bits (69), Expect = 0.046
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 19 VDKIFDQMDKNHDDRLTLEEFRE 41
+ F+Q+D N + L+L+E
Sbjct: 138 AAEAFNQVDTNGNGELSLDELLT 160
Score = 29.0 bits (65), Expect = 0.16
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDSS 59
R+ K FD+ D + + L +F + ++ I +A +
Sbjct: 6 SDRLKKRFDRWDFDGNGALERADFEKEAQ---HIAEAFGKDAGA 46
Score = 25.9 bits (57), Expect = 1.8
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 9 SEDENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ V I DKN D ++ +EF
Sbjct: 94 ASFNRVLGPVVKGIVGMCDKNADGQINADEFAA 126
Score = 23.9 bits (52), Expect = 7.1
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Query: 4 GQQPQSEDENTPQKRVDKIFDQM----DKNHDDRLTLEEF 39
G+ + + T + +FD + D LT E+F
Sbjct: 41 GKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQF 80
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium
dependent kinase, structural genomics, structural GE
consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 30.3 bits (69), Expect = 0.046
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 21 KIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDSSNVAPS 64
+IF Q+D N D +L +E EG + + S+ +
Sbjct: 44 QIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEA 87
Score = 25.7 bits (57), Expect = 2.0
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 3 KGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
KG D + + VD I +D + + + EF
Sbjct: 73 KGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEF 109
Score = 25.3 bits (56), Expect = 2.4
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ ++ + DKN+D + EEF E
Sbjct: 151 VTEVDDETWHQVLQECDKNNDGEVDFEEFVE 181
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 30.3 bits (69), Expect = 0.049
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
F +D++ +T E+ ++G
Sbjct: 56 STFLVLDEDGKGYITKEQLKKG 77
Score = 24.1 bits (53), Expect = 6.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 19 VDKIFDQMDKNHDDRLTLEEFRE 41
V ++ +DKN+D ++ EF E
Sbjct: 165 VKRMIRDVDKNNDGKIDFHEFSE 187
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 29.8 bits (67), Expect = 0.049
Identities = 5/39 (12%), Positives = 13/39 (33%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + + + +K +D N D + E+
Sbjct: 37 LLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEY 75
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 30.1 bits (68), Expect = 0.052
Identities = 3/23 (13%), Positives = 8/23 (34%)
Query: 19 VDKIFDQMDKNHDDRLTLEEFRE 41
+ +D + D ++ E
Sbjct: 134 ARQAAAALDTDGDGKVGETEIVP 156
Score = 29.7 bits (67), Expect = 0.068
Identities = 6/30 (20%), Positives = 15/30 (50%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFREGSKA 45
++R+ F D++ + + +F +KA
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKA 32
Score = 27.0 bits (60), Expect = 0.76
Identities = 3/32 (9%), Positives = 9/32 (28%)
Query: 9 SEDENTPQKRVDKIFDQMDKNHDDRLTLEEFR 40
+ + D + D +T+ +
Sbjct: 90 DRFAEMARPFLHAALGVADTDGDGAVTVADTA 121
Score = 24.3 bits (53), Expect = 6.9
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 4 GQQPQSEDENTPQKRVDKIFDQM----DKNHDDRLTLEEFREG 42
G +S+ + ++ + D++ D R+T EEF G
Sbjct: 38 GVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTG 80
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100
proteins, EF-; 1.94A {Homo sapiens}
Length = 104
Score = 29.5 bits (66), Expect = 0.056
Identities = 7/39 (17%), Positives = 17/39 (43%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + P + T + K+ +D N D+ + +E+
Sbjct: 40 LLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEY 78
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium,
polymorphism, structural genomics, spine2, structural
proteomics in europe, spine; NMR {Homo sapiens} PDB:
2kay_A
Length = 92
Score = 29.3 bits (66), Expect = 0.057
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEF 39
+ +D + +DKN D + +E+
Sbjct: 49 ESSIDDLMKSLDKNSDQEIDFKEY 72
>2hps_A Coelenterazine-binding protein with bound coelent;
bioluminescence, southeast collabora structural
genomics, secsg, structural genomics, PSI; HET: CTZ;
1.72A {Renilla muelleri} PDB: 2hq8_A
Length = 186
Score = 30.1 bits (68), Expect = 0.057
Identities = 7/55 (12%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Query: 7 PQSEDENTPQ--KRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGDSS 59
P+ + +++ ++D D ++ E++ + RI + L
Sbjct: 2 PEITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAV---RIAKIAKLSAEK 53
Score = 29.3 bits (66), Expect = 0.099
Identities = 5/30 (16%), Positives = 14/30 (46%)
Query: 12 ENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ + F+ +D N + +++ +EF
Sbjct: 133 PDLTDDKAITCFNTLDFNKNGQISRDEFLV 162
Score = 27.0 bits (60), Expect = 0.73
Identities = 7/34 (20%), Positives = 18/34 (52%)
Query: 8 QSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ E++ + ++D +D + D ++L EF+
Sbjct: 93 KGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKA 126
Score = 26.2 bits (58), Expect = 1.4
Identities = 6/34 (17%), Positives = 15/34 (44%)
Query: 9 SEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREG 42
+E ++ ++ DQ+ R+++EE
Sbjct: 51 AEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN 84
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 29.8 bits (67), Expect = 0.088
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 15 PQKRVDKIFDQMDKNHDDRLTLEEFRE 41
PQ+ F++ D + +L E
Sbjct: 160 PQEAAYTFFEKADTDKSGKLERTELVH 186
Score = 28.6 bits (64), Expect = 0.17
Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 9 SEDENTPQ--KRVDKIFDQMDKNHDDRLTLEEFREGSKA 45
+ ++ P+ R+ K FD D + D ++ ++E
Sbjct: 26 NVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDR 64
Score = 25.9 bits (57), Expect = 1.9
Identities = 5/27 (18%), Positives = 9/27 (33%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFREG 42
+ V F + L E++ E
Sbjct: 80 RDAVRVFFLHKGVEPVNGLLREDWVEA 106
Score = 24.4 bits (53), Expect = 5.7
Identities = 4/22 (18%), Positives = 12/22 (54%)
Query: 20 DKIFDQMDKNHDDRLTLEEFRE 41
+ +D +D + D + ++E +
Sbjct: 131 NSYYDVLDDDGDGTVDVDELKT 152
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 29.5 bits (67), Expect = 0.091
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
IF +D ++ L+ +E +G
Sbjct: 61 NIFIALDVDNSGTLSSQEILDG 82
Score = 23.7 bits (52), Expect = 8.7
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ K +D + ++D N D + EF
Sbjct: 161 ENPLIDKAIDSLLQEVDLNGDGEIDFHEF 189
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100
family, EF-hand protein, complex (ligand/annexin),
ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2
PDB: 1nsh_A
Length = 99
Score = 29.0 bits (65), Expect = 0.095
Identities = 6/39 (15%), Positives = 15/39 (38%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ +D++ ++D + D +L +EF
Sbjct: 40 FMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEF 78
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal
binding protein, binding protein; NMR {Homo sapiens}
PDB: 3c1v_A
Length = 113
Score = 29.1 bits (65), Expect = 0.100
Identities = 7/39 (17%), Positives = 17/39 (43%)
Query: 1 MFKGQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ + P + T + K+ +D N D+ + +E+
Sbjct: 49 LLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEY 87
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium
free, signaling protein; HET: MSE; 1.15A {Homo sapiens}
SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A
1jwd_A 2cnp_A 2jtt_A
Length = 90
Score = 28.6 bits (64), Expect = 0.10
Identities = 4/24 (16%), Positives = 13/24 (54%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEF 39
+ ++ + +D+N D + +E+
Sbjct: 50 DAEIARLMEDLDRNKDQEVNFQEY 73
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 29.0 bits (66), Expect = 0.11
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 19 VDKIFDQMDKNHDDRLTLEEFREG 42
+ +F ++D N D ++ EE +
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAF 25
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 29.4 bits (66), Expect = 0.12
Identities = 1/22 (4%), Positives = 10/22 (45%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
++F + + + ++ ++
Sbjct: 126 QLFLSSAVSGSGKFSFQDLKQV 147
Score = 27.1 bits (60), Expect = 0.69
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 12 ENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ +K+ + F +D + L+ +EF
Sbjct: 285 PESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
Score = 24.8 bits (54), Expect = 5.4
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 19 VDKIFDQMDKNHDDRLTLEEF 39
D +F D++ D + E+
Sbjct: 225 QDALFRYADEDESDDVGFSEY 245
Score = 24.4 bits (53), Expect = 5.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 17 KRVDKIFDQMDKNHDDRLTLEEFREG 42
+ F ++D N + L+ +EFRE
Sbjct: 188 AALVADFRKIDTNSNGTLSRKEFREH 213
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 29.1 bits (66), Expect = 0.13
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 12 ENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ Q+ VDK DK+ D R++ EEF
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEFCA 140
Score = 24.9 bits (55), Expect = 4.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
K F ++D ++ L++EEF
Sbjct: 10 KRFKKLDLDNSGSLSVEEFMSL 31
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein,
EF-hand, calcium regulation, oligomer neuronal
development, spine2; 2.03A {Danio rerio}
Length = 99
Score = 28.6 bits (64), Expect = 0.13
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 19 VDKIFDQMDKNHDDRLTLEEF 39
V+KI + +D N D+ + EF
Sbjct: 55 VEKIMNDLDSNKDNEVDFNEF 75
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme
delta1; phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 29.1 bits (64), Expect = 0.15
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 13 NTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
KIF + D + D L EE
Sbjct: 43 QVDDGYARKIFRECDHSQTDSLEDEEIET 71
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 28.1 bits (63), Expect = 0.17
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 19 VDKIFDQMDKNHDDRLTLEEFREG 42
+ +F ++D + D +T +EF G
Sbjct: 63 AEAVFQRLDADRDGAITFQEFARG 86
Score = 26.2 bits (58), Expect = 0.82
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Query: 9 SEDENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+E R+ +F D N RL EEFR
Sbjct: 22 DGEE---LARLRSVFAACDANRSGRLEREEFRA 51
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 27.7 bits (62), Expect = 0.21
Identities = 5/25 (20%), Positives = 11/25 (44%)
Query: 15 PQKRVDKIFDQMDKNHDDRLTLEEF 39
P + I+ D +L+ ++F
Sbjct: 42 PSTLLAHIWSLCDTKDCGKLSKDQF 66
Score = 27.4 bits (61), Expect = 0.30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ + D+IF + DK+ D ++ E RE
Sbjct: 9 KAKYDEIFLKTDKDMDGFVSGLEVRE 34
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate
hydrogen bond, nucleotide binding fold, thior reductase,
thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium}
SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A
1zyp_A
Length = 521
Score = 28.4 bits (64), Expect = 0.23
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
Query: 33 RLTLEEFRE--GSKADPRIVQALSLGDSSNVAPSGSSPASASAA--------SPLVLERD 82
R+TL E + A+ R +AL+ D+ +V GS PA A+AA ++
Sbjct: 185 RMTLTEIVAKVDTGAEKRAAEALNKRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER 244
Query: 83 I 83
Sbjct: 245 F 245
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix,
structural genomics, protein structure initiative; NMR
{Arabidopsis thaliana} SCOP: a.39.1.5
Length = 67
Score = 27.1 bits (61), Expect = 0.26
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 21 KIFDQMDKNHDDRLTLEEFREGSKA 45
++F++ DKN D +L+L+EFRE + A
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALA 29
Score = 24.8 bits (55), Expect = 2.1
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
Q+ + K F+++D + + L +EF
Sbjct: 31 SPYFTQEDIVKFFEEIDVDGNGELNADEF 59
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 27.5 bits (62), Expect = 0.30
Identities = 5/22 (22%), Positives = 14/22 (63%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
++F +D ++ +T +E ++G
Sbjct: 27 ELFKMIDTDNSGTITFDELKDG 48
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 27.8 bits (62), Expect = 0.31
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 15 PQKRVDKIFDQMDKNHDDRLTLEEF 39
PQ ++ I++ D + D +LT EEF
Sbjct: 46 PQAQLASIWNLSDIDQDGKLTAEEF 70
Score = 25.5 bits (56), Expect = 2.0
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ + ++F+ DK LT + R
Sbjct: 13 RLKYRQLFNSHDKTMSGHLTGPQART 38
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 27.5 bits (62), Expect = 0.40
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
++F+ +D + ++T EE + G
Sbjct: 31 EMFNMIDADKSGQITFEELKAG 52
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis
complex; NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 27.0 bits (60), Expect = 0.45
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 15 PQKRVDKIFDQMDKNHDDRLTLEEF 39
P + I++ D + D LTL+EF
Sbjct: 41 PILELSHIWELSDFDKDGALTLDEF 65
Score = 26.2 bits (58), Expect = 0.85
Identities = 2/27 (7%), Positives = 9/27 (33%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFREG 42
++ F + + + + +E
Sbjct: 8 RQYYVNQFKTIQPDLNGFIPGSAAKEF 34
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand,
EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB:
2jxc_A 1f8h_A 1ff1_A
Length = 106
Score = 27.1 bits (60), Expect = 0.46
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 15 PQKRVDKIFDQMDKNHDDRLTLEEF 39
P + ++++ D +HD L +EF
Sbjct: 46 PVDILGRVWELSDIDHDGMLDRDEF 70
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand,
structural genomics, seattle S genomics center for
infectious disease, ssgcid; 1.90A {Entamoeba
histolytica} PDB: 3sia_A 3sib_A
Length = 220
Score = 27.4 bits (61), Expect = 0.52
Identities = 7/38 (18%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Query: 5 QQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREG 42
D+ R+ + F +D++ L + E G
Sbjct: 42 LNTIPLDQ---YTRIYQWFMGVDRDRSGTLEINELMMG 76
Score = 26.7 bits (59), Expect = 0.95
Identities = 6/45 (13%), Positives = 10/45 (22%), Gaps = 5/45 (11%)
Query: 21 KIFDQMDKNHDDRLTLEEFRE-----GSKADPRIVQALSLGDSSN 60
+F + L E G + R L +
Sbjct: 121 NLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFARG 165
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 27.2 bits (60), Expect = 0.66
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 12 ENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+ +F ++DKN +T +EF
Sbjct: 162 WGAKVEDPAALFKELDKNGTGSVTFDEF 189
Score = 26.4 bits (58), Expect = 1.1
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 21 KIFDQMDKNHDDRLTLEEFRE 41
+FD++D + + + EEF+
Sbjct: 134 VMFDEIDASGNMLVDEEEFKR 154
Score = 26.4 bits (58), Expect = 1.2
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 9 SEDENTPQK-RVDKIFDQMDKNHDDRLTLEEFREG 42
++ K R ++F + DKN +L +E G
Sbjct: 39 PREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSG 73
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform
A; EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 26.7 bits (59), Expect = 0.67
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
+ F+ D + ++ EEFR
Sbjct: 28 QEFENFDTMKTNTISREEFRAI 49
Score = 24.4 bits (53), Expect = 4.3
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 19 VDKIFDQMDKNHDDRLTLEEF 39
D+++++M N RL +F
Sbjct: 62 FDRLWNEMPVNAKGRLKYPDF 82
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 26.6 bits (59), Expect = 0.85
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 21 KIFDQMDKNHDDRLTLEEFREGSKAD 46
+FD +D N + ++TL+E + D
Sbjct: 24 HMFDFLDINGNGKITLDEIVSKASDD 49
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain,
EF-SAM, STIM1, store operated calcium entry regulator,
SOCE; NMR {Homo sapiens}
Length = 150
Score = 26.6 bits (58), Expect = 0.95
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 5 QQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
SEDE + V I MD + + + +EE E
Sbjct: 3 HMASSEDEKLSFEAVRNIHKLMDDDANGDVDVEESDE 39
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 26.6 bits (58), Expect = 0.97
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 13 NTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKA 45
R+ FD +DKN D RLT EE +E
Sbjct: 94 QGFDNRLRTFFDMVDKNADGRLTAEEVKEIIAL 126
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 26.5 bits (57), Expect = 1.2
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 51 QALS-LGDSSNV-APSGSSPASASAAS 75
QAL L S + A S+PA A A+
Sbjct: 20 QALKKLQASLKLYAD-DSAPALAIKAT 45
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 26.3 bits (58), Expect = 1.2
Identities = 4/31 (12%), Positives = 11/31 (35%)
Query: 11 DENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ ++ F D + +L ++E
Sbjct: 139 GIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169
Score = 26.3 bits (58), Expect = 1.2
Identities = 8/39 (20%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 8 QSEDENTPQKRVD--KIFDQMDKNHDDRLTLEEFREGSK 44
+ D + P+ +F+ +D NH+ +++L+E +
Sbjct: 5 LTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKAS 43
Score = 25.2 bits (55), Expect = 3.1
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 8 QSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
+ + D +FD +DK+ + +TL+E++
Sbjct: 100 AKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKA 133
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 26.4 bits (59), Expect = 1.2
Identities = 5/22 (22%), Positives = 14/22 (63%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
++F +D ++ +T +E ++G
Sbjct: 14 ELFKMIDTDNSGTITFDELKDG 35
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 26.5 bits (57), Expect = 1.2
Identities = 5/21 (23%), Positives = 12/21 (57%)
Query: 19 VDKIFDQMDKNHDDRLTLEEF 39
+ F+ D ++D + L+E+
Sbjct: 192 TTRFFETCDLDNDKYIALDEW 212
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos
taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A
1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A
1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 25.3 bits (56), Expect = 1.3
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 10 EDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
+D++ +++DKN D ++ EEF
Sbjct: 38 PSLLKGMSTLDEMIEEVDKNGDGEVSFEEF 67
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE
calcium entry, signaling protein; NMR {Homo sapiens}
Length = 150
Score = 26.1 bits (57), Expect = 1.4
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 8 QSEDENTPQKRVDKIFDQMDKNHDDRLTLEE 38
+E++ + + I QMD + D + +EE
Sbjct: 6 STEEDRFSLEALQTIHKQMDDDKDGGIEVEE 36
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of
cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB:
1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S
3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 26.2 bits (58), Expect = 1.5
Identities = 6/45 (13%), Positives = 12/45 (26%), Gaps = 5/45 (11%)
Query: 21 KIFDQMDKNHDDRLTLEEFRE-----GSKADPRIVQALSLGDSSN 60
I+ Q D + + E G + + + S
Sbjct: 81 AIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDE 125
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 25.5 bits (56), Expect = 1.7
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 15 PQKRVDKIFDQMDKNHDDRLTLEEF 39
+ I++ D + D LTL EF
Sbjct: 54 SIPELSYIWELSDADCDGALTLPEF 78
Score = 24.3 bits (53), Expect = 5.2
Identities = 1/26 (3%), Positives = 8/26 (30%)
Query: 16 QKRVDKIFDQMDKNHDDRLTLEEFRE 41
++ F + + ++ +
Sbjct: 21 REYYVNQFRSLQPDPSSFISGSVAKN 46
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 25.6 bits (56), Expect = 2.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 15 PQKRVDKIFDQMDKNHDDRLTLEEF 39
PQ + +I+ D N+D R+ EF
Sbjct: 64 PQPVLAQIWALADMNNDGRMDQVEF 88
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 25.3 bits (56), Expect = 2.0
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
IF +D + L +E +
Sbjct: 45 DIFRFIDNDQSGYLDGDELKYF 66
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 25.8 bits (56), Expect = 2.2
Identities = 6/33 (18%), Positives = 10/33 (30%)
Query: 8 QSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFR 40
S K + + D N D ++ E
Sbjct: 231 PSISGGDLDKFRECLLTHCDMNKDGKIQKSELA 263
Score = 25.4 bits (55), Expect = 2.7
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 5 QQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
Q + N + D + DKN D RL L +
Sbjct: 136 QHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDL 170
Score = 23.9 bits (51), Expect = 9.4
Identities = 3/22 (13%), Positives = 10/22 (45%)
Query: 21 KIFDQMDKNHDDRLTLEEFREG 42
+I+ D + + + +E +
Sbjct: 15 QIWQHFDADDNGYIEGKELDDF 36
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8
PDB: 1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 25.4 bits (56), Expect = 2.4
Identities = 6/38 (15%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 21 KIFDQMDKNHDDRLTLEEFRE-----GSKADPRIVQAL 53
+ F +D++ + E R+ G + P+ + +
Sbjct: 74 ENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTI 111
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 25.0 bits (55), Expect = 2.9
Identities = 6/38 (15%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 21 KIFDQMDKNHDDRLTLEEFRE-----GSKADPRIVQAL 53
+ F D + + +E ++ G + +P+ V ++
Sbjct: 76 QHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSI 113
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix,
ARAC family, activator, DNA-binding transcription,
transcription regulation; HET: PAM; 1.90A {Vibrio
cholerae}
Length = 276
Score = 25.3 bits (55), Expect = 3.0
Identities = 3/35 (8%), Positives = 10/35 (28%)
Query: 5 QQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
++ S ++KI + + +
Sbjct: 157 KKYNSIFITDDLDAMEKISCLVKSDITRNWRWADI 191
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 24.8 bits (54), Expect = 5.0
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 8 QSEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 39
++ D+ + D + D N+D +L L E
Sbjct: 138 KTVDDTKLAEYTDLMLKLFDSNNDGKLELTEM 169
Score = 24.4 bits (53), Expect = 5.3
Identities = 5/38 (13%), Positives = 11/38 (28%), Gaps = 1/38 (2%)
Query: 4 GQQPQSEDENTPQKRVDKIFDQMDKNHDDRLTLEEFRE 41
Q + + DQ + D ++ + E
Sbjct: 46 LQAR-KKAGLELSPEMKTFVDQYGQRDDGKIGIVELAH 82
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+)
requirement, hydrolase chimera; 2.80A {Rattus
norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Length = 900
Score = 24.7 bits (53), Expect = 5.2
Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Query: 21 KIFDQMDKNHDDRLTLEEFRE-----GSKADPRIVQALSL 55
IF + D + ++ E R G K ++ Q +
Sbjct: 611 TIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVA 650
Score = 24.7 bits (53), Expect = 5.9
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 26 MDKNHDDRLTLEEFRE 41
MD + +L EEF+
Sbjct: 783 MDSDTTGKLGFEEFKY 798
Score = 24.3 bits (52), Expect = 7.7
Identities = 4/40 (10%), Positives = 11/40 (27%), Gaps = 5/40 (12%)
Query: 21 KIFDQMDKNHDDRLTLEEFRE-----GSKADPRIVQALSL 55
I+ + + + + E G + I +
Sbjct: 808 GIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIR 847
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15,
EPS15; EH domain, EF-hand, solution structure, S100
protein; NMR {Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 24.0 bits (52), Expect = 5.2
Identities = 3/22 (13%), Positives = 10/22 (45%)
Query: 20 DKIFDQMDKNHDDRLTLEEFRE 41
+K + Q++ + R+ +
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAA 35
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A
1rjv_A 1rk9_A 1g33_A
Length = 109
Score = 23.8 bits (52), Expect = 6.9
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 21 KIFDQMDKNHDDRLTLEEFREGSKADPRIVQALS 54
K+F +DK+ + +E K + LS
Sbjct: 45 KVFHILDKDKSGFIEEDELGSILKGFSSDARDLS 78
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 23.7 bits (52), Expect = 8.6
Identities = 5/38 (13%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
Query: 21 KIFDQMDKNHDDRLTLEEFRE-----GSKADPRIVQAL 53
+F D+++ + E ++ G + + L
Sbjct: 78 NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDIL 115
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 24.0 bits (52), Expect = 9.8
Identities = 6/38 (15%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 21 KIFDQMDKNHDDRLTLEEFRE-----GSKADPRIVQAL 53
+ F D + + +E ++ G + P+ V ++
Sbjct: 107 QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSI 144
>1x1n_A 4-alpha-glucanotransferase; disproportionating enzyme,
amylomaltase, D-enzyme; 1.80A {Solanum tuberosum} SCOP:
c.1.8.1
Length = 524
Score = 24.0 bits (52), Expect = 9.8
Identities = 7/42 (16%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 48 RIVQALSLGDSSNVAPSGSSP---ASASAASPLVLERDIMAE 86
+ Q L L SP A+ + L++ + + +
Sbjct: 63 SLWQVLPLVPPGKRGNEDGSPYSGQDANCGNTLLISLEELVD 104
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.307 0.125 0.336
Gapped
Lambda K H
0.267 0.0639 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,225,206
Number of extensions: 59506
Number of successful extensions: 408
Number of sequences better than 10.0: 1
Number of HSP's gapped: 407
Number of HSP's successfully gapped: 218
Length of query: 90
Length of database: 6,701,793
Length adjustment: 57
Effective length of query: 33
Effective length of database: 5,110,296
Effective search space: 168639768
Effective search space used: 168639768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 51 (23.6 bits)